peptide lca domain realm kingdom subkingdom superphylum phylum subphylum superclass class subclass superorder order suborder infraorder superfamily family subfamily tribe subtribe genus subgenus species group species subgroup species subspecies strain varietas forma EC EC - names GO (biological process) GO (cellular component) GO (molecular function) GO (biological process) - names GO (cellular component) - names GO (molecular function) - names InterPro InterPro - names HSPFFSNYRPQFYFR Bacillati Bacteria Bacillati 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (19.6%) "GO:0003746 (19.7%) GO:0005525 (19.6%) GO:0003924 (19.4%)" cytosol (19.6%) "translation elongation factor activity (19.7%) GTP binding (19.6%) GTPase activity (19.4%)" "IPR004160 (8.8%) IPR009001 (8.8%) IPR050055 (8.8%)" "Translation elongation factor EFTu/EF1A, C-terminal (8.8%) Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (8.8%) Elongation factor Tu GTPase (8.8%)" VHINSVVDDIADVEVNGTPYQVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.1.70 (100%) Transferred entry: 7.2.4.5 (100%) GO:0016829 (100%) lyase activity (100%) "IPR000089 (25%) IPR001882 (25%) IPR011053 (25%)" "Biotin/lipoyl attachment (25%) Biotin-binding site (25%) Single hybrid motif (25%)" DAKDFDDALSIR Bacteria Bacteria "3.1.13.1 (98.9%) 3.1.-.- (1.1%)" "exoribonuclease II (98.9%) Acting on ester bonds (1.1%)" "GO:0006402 (24.9%) GO:0006334 (0%)" "GO:0005829 (24.8%) GO:0000786 (0%)" "GO:0003723 (24.9%) GO:0008859 (24.7%) GO:0004540 (0.2%)" "mRNA catabolic process (24.9%) nucleosome assembly (0%)" "cytosol (24.8%) nucleosome (0%)" "RNA binding (24.9%) exoribonuclease II activity (24.7%) RNA nuclease activity (0.2%)" "IPR001900 (11.6%) IPR012340 (11.6%) IPR050180 (11.6%)" "Ribonuclease II/R (11.6%) Nucleic acid-binding, OB-fold (11.6%) RNR Ribonuclease (11.6%)" IQGIGAGFIPANLDLK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "2.5.1.47 (99.2%) 4.5.1.5 (0.8%)" "cysteine synthase (99.2%) S-carboxymethylcysteine synthase (0.8%)" "GO:0006535 (34.4%) GO:0006534 (0.3%) GO:0008652 (0.3%)" "GO:0005737 (0.3%) GO:0005829 (0.3%) GO:0009333 (0.3%)" "GO:0004124 (34.7%) GO:0016829 (23.6%) GO:0016740 (1.8%)" "cysteine biosynthetic process from serine (34.4%) cysteine metabolic process (0.3%) amino acid biosynthetic process (0.3%)" "cytoplasm (0.3%) cytosol (0.3%) cysteine synthase complex (0.3%)" "cysteine synthase activity (34.7%) lyase activity (23.6%) transferase activity (1.8%)" "IPR001926 (16.9%) IPR036052 (16.9%) IPR050214 (16.9%)" "Tryptophan synthase beta chain-like, PALP domain (16.9%) Tryptophan synthase beta chain-like, PALP domain superfamily (16.9%) Cysteine synthase/Cystathionine beta-synthase (16.9%)" DNNWNNDISVGAGTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR024302 (48.1%) IPR041662 (1.9%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (48.1%) SusD-like 2 (1.9%)" YKGTLYEVIYQLVGGLR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20.2%) GO:0006183 (20.2%)" "GO:0003938 (20.2%) GO:0046872 (20.2%) GO:0000166 (18.7%)" "GMP biosynthetic process (20.2%) GTP biosynthetic process (20.2%)" "IMP dehydrogenase activity (20.2%) metal ion binding (20.2%) nucleotide binding (18.7%)" "IPR001093 (16.8%) IPR005990 (16.8%) IPR013785 (16.8%)" "IMP dehydrogenase/GMP reductase (16.8%) Inosine-5'-monophosphate dehydrogenase (16.8%) Aldolase-type TIM barrel (16.8%)" NYQNDGDSVYR root "1.3.5.1 (99%) 1.3.5.4 (1%)" "succinate dehydrogenase (99%) Transferred entry: 1.3.5.1 (1%)" "GO:0009061 (20%) GO:0006633 (0%)" "GO:0005886 (20%) GO:0009317 (0%)" "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (14.9%)" "anaerobic respiration (20%) fatty acid biosynthetic process (0%)" "plasma membrane (20%) acetyl-CoA carboxylase complex (0%)" "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (14.9%)" "IPR003953 (14.4%) IPR030664 (14.4%) IPR036188 (14.4%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.4%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (14.4%) FAD/NAD(P)-binding domain superfamily (14.4%)" GQVLAKPGSIKPHTK root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0%) GO:0032790 (0%) GO:0070125 (0%)" "GO:0005829 (16.7%) GO:0032045 (9.7%) GO:0005737 (0.3%)" "GO:0003746 (17.4%) GO:0005525 (17.1%) GO:0003924 (14.9%)" "translational elongation (0%) ribosome disassembly (0%) mitochondrial translational elongation (0%)" "cytosol (16.7%) guanyl-nucleotide exchange factor complex (9.7%) cytoplasm (0.3%)" "translation elongation factor activity (17.4%) GTP binding (17.1%) GTPase activity (14.9%)" "IPR050055 (9.4%) IPR004160 (9.4%) IPR009000 (9.3%)" "Elongation factor Tu GTPase (9.4%) Translation elongation factor EFTu/EF1A, C-terminal (9.4%) Translation protein, beta-barrel domain superfamily (9.3%)" NVTAGANPMDIKR root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (20.1%) GO:0009408 (0.1%) GO:0051085 (0%)" "GO:0005737 (11.7%) GO:0009986 (0.1%) GO:0042603 (0.1%)" "GO:0005524 (20.1%) GO:0140662 (20.1%) GO:0016853 (15.8%)" "protein refolding (20.1%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (11.7%) cell surface (0.1%) capsule (0.1%)" "ATP binding (20.1%) ATP-dependent protein folding chaperone (20.1%) isomerase activity (15.8%)" "IPR001844 (17.9%) IPR002423 (17.9%) IPR027413 (17.8%)" "Chaperonin Cpn60/GroEL (17.9%) Chaperonin Cpn60/GroEL/TCP-1 family (17.9%) GroEL-like equatorial domain superfamily (17.8%)" LDVYHTQTAPLADYYVGEGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.4.3 (100%) adenylate kinase (100%) GO:0044209 (25%) GO:0005737 (25%) "GO:0004017 (25%) GO:0005524 (25%)" AMP salvage (25%) cytoplasm (25%) "AMP kinase activity (25%) ATP binding (25%)" "IPR000850 (33.3%) IPR027417 (33.3%) IPR033690 (33.3%)" "Adenylate kinase/UMP-CMP kinase (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%) Adenylate kinase, conserved site (33.3%)" LLVSELKDSDAAVLGASALAWELKDLRD Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (75%) GO:0004340 (25%)" "kinase activity (75%) glucokinase activity (25%)" "IPR000600 (34%) IPR043129 (34%) IPR049874 (31.9%)" "ROK family (34%) ATPase, nucleotide binding domain (34%) ROK, conserved site (31.9%)" VSPDANKLEIKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (19.8%) GO:0032543 (0.8%)" "GO:0005840 (19.8%) GO:1990904 (19.8%) GO:0005762 (0.8%)" "GO:0003735 (20.7%) GO:0019843 (18.2%)" "translation (19.8%) mitochondrial translation (0.8%)" "ribosome (19.8%) ribonucleoprotein complex (19.8%) mitochondrial large ribosomal subunit (0.8%)" "structural constituent of ribosome (20.7%) rRNA binding (18.2%)" "IPR012677 (26%) IPR012678 (26%) IPR013025 (26%)" "Nucleotide-binding alpha-beta plait domain superfamily (26%) Ribosomal protein uL23/eL15/eS24 core domain superfamily (26%) Large ribosomal subunit protein uL23-like (26%)" NINLVADMLKAEIIKDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (62.5%) "GO:0016853 (34.4%) GO:0003755 (3.1%)" plasma membrane (62.5%) "isomerase activity (34.4%) peptidyl-prolyl cis-trans isomerase activity (3.1%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" HKAEYTPHVDTGDYIIVLNADK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.8%) GO:0017148 (19.8%) GO:0002181 (0%)" "GO:0022625 (19.8%) GO:0005840 (0.6%) GO:0005737 (0.1%)" "GO:0003735 (19.9%) GO:0003729 (19.8%) GO:0008270 (0%)" "translation (19.8%) negative regulation of translation (19.8%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (19.8%) ribosome (0.6%) cytoplasm (0.1%)" "structural constituent of ribosome (19.9%) mRNA binding (19.8%) zinc ion binding (0%)" "IPR005822 (25%) IPR005823 (25%) IPR036899 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13 superfamily (25%)" AGQEEANTYFAQGGIASVTNLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.3.16 (100%) L-aspartate oxidase (100%) GO:0034628 (33.3%) GO:0005737 (33.3%) GO:0008734 (33.3%) 'de novo' NAD+ biosynthetic process from L-aspartate (33.3%) cytoplasm (33.3%) L-aspartate oxidase activity (33.3%) "IPR003953 (16.7%) IPR005288 (16.7%) IPR015939 (16.7%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (16.7%) L-aspartate oxidase (16.7%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (16.7%)" SAKDMTCQEFIDLNPK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:1990451 (32.6%) GO:0009268 (0.4%) GO:0010447 (0.4%)" "GO:0042597 (33.3%) GO:0030288 (0.4%)" GO:0051082 (33%) "cellular stress response to acidic pH (32.6%) response to pH (0.4%) response to acidic pH (0.4%)" "periplasmic space (33.3%) outer membrane-bounded periplasmic space (0.4%)" unfolded protein binding (33%) "IPR010486 (33.6%) IPR038303 (33.6%) IPR028623 (32.9%)" "HNS-dependent expression A/B (33.6%) HNS-dependent expression A/B superfamily (33.6%) HNS-dependent expression B (32.9%)" IVYTPIHGTGMMLIPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.2 (62.5%) 5.4.2.- (31.3%) 5.4.2.8 (6.3%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (62.5%) Phosphotransferases (phosphomutases) (31.3%) phosphomannomutase (6.3%)" "GO:0005975 (24%) GO:0006166 (24%)" "GO:0000287 (24%) GO:0008973 (24%) GO:0004614 (3.6%)" "carbohydrate metabolic process (24%) purine ribonucleoside salvage (24%)" "magnesium ion binding (24%) phosphopentomutase activity (24%) phosphoglucomutase activity (3.6%)" "IPR005844 (12.7%) IPR016055 (12.7%) IPR016066 (12.7%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.7%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (12.7%) Alpha-D-phosphohexomutase, conserved site (12.7%)" FQLAENIHVR root "GO:0050821 (49.7%) GO:0009408 (0.1%) GO:0017148 (0.1%)" "GO:0005737 (49.7%) GO:0005829 (0.1%)" "GO:0042802 (0.1%) GO:0042803 (0.1%) GO:0048027 (0.1%)" "protein stabilization (49.7%) response to heat (0.1%) negative regulation of translation (0.1%)" "cytoplasm (49.7%) cytosol (0.1%)" "identical protein binding (0.1%) protein homodimerization activity (0.1%) mRNA 5'-UTR binding (0.1%)" "IPR002068 (25.2%) IPR008978 (25.2%) IPR037913 (24.9%)" "Alpha crystallin/Hsp20 domain (25.2%) HSP20-like chaperone (25.2%) Small heat shock protein IbpA/IbpB, ACD domain (24.9%)" TASPAQAQEIHAFIR Pseudomonadati Bacteria Pseudomonadati 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" DFTYIDDIIAGLMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.46 (100%) dTDP-glucose 4,6-dehydratase (100%) GO:0008460 (100%) dTDP-glucose 4,6-dehydratase activity (100%) "IPR001509 (50%) IPR036291 (50%)" "NAD-dependent epimerase/dehydratase (50%) NAD(P)-binding domain superfamily (50%)" GNNVVVLGTQWGDEGKGK root 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.6%) GO:0046040 (16.6%) GO:0006164 (0%)" "GO:0005737 (16.6%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0004019 (16.6%) GO:0005525 (16.6%) GO:0000287 (16.4%)" "'de novo' AMP biosynthetic process (16.6%) IMP metabolic process (16.6%) purine nucleotide biosynthetic process (0%)" "cytoplasm (16.6%) cytosol (0%) membrane (0%)" "adenylosuccinate synthase activity (16.6%) GTP binding (16.6%) magnesium ion binding (16.4%)" "IPR001114 (14.4%) IPR018220 (14.4%) IPR027417 (14.4%)" "Adenylosuccinate synthetase (14.4%) Adenylosuccinate synthase, GTP-binding site (14.4%) P-loop containing nucleoside triphosphate hydrolase (14.4%)" LALNIPLLDSR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.2.1.3 (100%) long-chain-fatty-acid--CoA ligase (100%) GO:0016020 (5%) "GO:0016405 (80%) GO:0004467 (15%)" membrane (5%) "CoA-ligase activity (80%) long-chain fatty acid-CoA ligase activity (15%)" "IPR000873 (30.2%) IPR020845 (30.2%) IPR042099 (30.2%)" "AMP-dependent synthetase/ligase domain (30.2%) AMP-binding, conserved site (30.2%) ANL, N-terminal domain (30.2%)" DGFVMGEGGGCLILEELEHAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.4%) IPR014030 (14.4%) IPR014031 (14.4%)" "Beta-ketoacyl synthase (14.4%) Beta-ketoacyl synthase-like, N-terminal (14.4%) Beta-ketoacyl synthase, C-terminal (14.4%)" AHPDVFNILLQVLDDGRLTDNKGR root "GO:0034605 (18.7%) GO:0042026 (17.6%) GO:0006508 (3.6%)" GO:0005737 (18.6%) "GO:0005524 (18.7%) GO:0016887 (18.7%) GO:0008233 (3.6%)" "cellular response to heat (18.7%) protein refolding (17.6%) proteolysis (3.6%)" cytoplasm (18.6%) "ATP binding (18.7%) ATP hydrolysis activity (18.7%) peptidase activity (3.6%)" "IPR003959 (8.4%) IPR050130 (8.4%) IPR027417 (8.4%)" "ATPase, AAA-type, core (8.4%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.4%) P-loop containing nucleoside triphosphate hydrolase (8.4%)" WIIGDSGMMNFPNIFKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016853 (100%) isomerase activity (100%) "IPR013022 (32.1%) IPR036237 (32.1%) IPR050312 (32.1%)" "Xylose isomerase-like, TIM barrel domain (32.1%) Xylose isomerase-like superfamily (32.1%) IolE/XylA/MocC-like (32.1%)" ATGLVFTCEFPHATPADCSAHSYNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50%) GO:0046872 (50%)" "alkaline phosphatase activity (50%) metal ion binding (50%)" "IPR001952 (50%) IPR017850 (50%)" "Alkaline phosphatase (50%) Alkaline-phosphatase-like, core domain superfamily (50%)" ISVNPNQPR root "GO:0007059 (25%) GO:0045881 (25%)" GO:0005694 (25%) GO:0003677 (25%) "chromosome segregation (25%) positive regulation of sporulation resulting in formation of a cellular spore (25%)" chromosome (25%) DNA binding (25%) "IPR003115 (16.8%) IPR004437 (16.8%) IPR036086 (16.8%)" "ParB-like, N-terminal domain (16.8%) ParB/RepB/Spo0J partition protein (16.8%) ParB/Sulfiredoxin superfamily (16.8%)" ELNISGPFNMQFLAK Pseudomonadati Bacteria Pseudomonadati "6.3.5.5 (93.8%) 6.3.4.16 (6.3%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (93.8%) carbamoyl-phosphate synthase (ammonia) (6.3%)" "GO:0006526 (13.4%) GO:0006541 (13.4%) GO:0006221 (13.1%)" GO:0005737 (13.4%) "GO:0004088 (13.4%) GO:0005524 (13.4%) GO:0046872 (13.4%)" "L-arginine biosynthetic process (13.4%) glutamine metabolic process (13.4%) pyrimidine nucleotide biosynthetic process (13.1%)" cytoplasm (13.4%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.4%) ATP binding (13.4%) metal ion binding (13.4%)" "IPR005479 (10.3%) IPR011761 (10.3%) IPR005480 (10.1%)" "Carbamoyl phosphate synthase, ATP-binding domain (10.3%) ATP-grasp fold (10.3%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10.1%)" SSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGK Bacteria Bacteria 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0000303 (0.3%) GO:0006801 (0.3%) GO:0019430 (0.3%)" "GO:0005737 (30.7%) GO:0005829 (0.3%) GO:0016020 (0.3%)" "GO:0004784 (33.2%) GO:0046914 (30.4%) GO:0046872 (2.6%)" "response to superoxide (0.3%) superoxide metabolic process (0.3%) removal of superoxide radicals (0.3%)" "cytoplasm (30.7%) cytosol (0.3%) membrane (0.3%)" "superoxide dismutase activity (33.2%) transition metal ion binding (30.4%) metal ion binding (2.6%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" TVGEQLSNQFAIGLAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20.8%) GO:0000428 (21%) "GO:0003677 (20.8%) GO:0003899 (20.8%) GO:0032549 (16.4%)" DNA-templated transcription (20.8%) DNA-directed RNA polymerase complex (21%) "DNA binding (20.8%) DNA-directed RNA polymerase activity (20.8%) ribonucleoside binding (16.4%)" "IPR007645 (9.6%) IPR007120 (7.6%) IPR007121 (7.6%)" "RNA polymerase Rpb2, domain 3 (9.6%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.6%) RNA polymerase, beta subunit, conserved site (7.6%)" HGASCPIGLGVSCSADR root 4.2.1.2 (100%) fumarate hydratase (100%) "GO:0006099 (19.4%) GO:0006106 (5%) GO:0006108 (4.1%)" "GO:0005737 (2.7%) GO:0005829 (0.4%) GO:0016020 (0.4%)" "GO:0051539 (19.4%) GO:0046872 (18.9%) GO:0004333 (18.5%)" "tricarboxylic acid cycle (19.4%) fumarate metabolic process (5%) malate metabolic process (4.1%)" "cytoplasm (2.7%) cytosol (0.4%) membrane (0.4%)" "4 iron, 4 sulfur cluster binding (19.4%) metal ion binding (18.9%) fumarate hydratase activity (18.5%)" "IPR004646 (17.4%) IPR004647 (17.4%) IPR036660 (17.4%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (17.4%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (17.4%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (17.4%)" QLNVEEILYAATLTNDPAKKADIYTK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" FIGSGGILDVQR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "1.8.5.- (97.8%) 1.8.-.- (2.2%)" "With a quinone or similar compound as acceptor (97.8%) Acting on a sulfur group of donors (2.2%)" "GO:0030091 (20.3%) GO:1901530 (0%)" "GO:0042597 (18.1%) GO:0030288 (0%)" "GO:0043546 (20.3%) GO:0046872 (20.3%) GO:0016672 (20.3%)" "protein repair (20.3%) response to hypochlorite (0%)" "periplasmic space (18.1%) outer membrane-bounded periplasmic space (0%)" "molybdopterin cofactor binding (20.3%) metal ion binding (20.3%) oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor (20.3%)" "IPR036374 (25.9%) IPR000572 (25.7%) IPR022867 (25%)" "Oxidoreductase, molybdopterin-binding domain superfamily (25.9%) Oxidoreductase, molybdopterin-binding domain (25.7%) Protein-methionine-sulfoxide reductase subunit MsrP (25%)" TLRGELPLEVQDLEDEIAGLETR Bacteroidota Bacteria Pseudomonadati Bacteroidota "IPR052376 (50%) IPR003743 (49%) IPR056003 (1%)" "Oxidative Scavengers and Glycosyltransferases (50%) C4-type zinc ribbon domain (49%) CT398-like coiled coil hairpin domain (1%)" GMFSIMNYMNPLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.1%) GO:0005829 (17.1%) "GO:0004612 (17.1%) GO:0005524 (17.1%) GO:0046872 (16.8%)" gluconeogenesis (17.1%) cytosol (17.1%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.1%) ATP binding (17.1%) metal ion binding (16.8%)" "IPR001272 (25.2%) IPR008210 (25.2%) IPR013035 (24.8%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.2%) Phosphoenolpyruvate carboxykinase, N-terminal (25.2%) Phosphoenolpyruvate carboxykinase, C-terminal (24.8%)" ALSDFYLDFLKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016646 (100%) oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor (100%) "IPR016040 (33.3%) IPR036291 (33.3%) IPR051606 (33.3%)" "NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%) Polyketide Oxidoreductase-like (33.3%)" SQSKEYQESILPAGSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" LFVHHIQNAENGATVEFEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (15.4%) GO:0003723 (1.3%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (15.4%) RNA binding (1.3%)" "IPR001787 (33.3%) IPR028909 (33.3%) IPR036164 (33.3%)" "Large ribosomal subunit protein bL21 (33.3%) Large ribosomal subunit protein bL21-like (33.3%) Large ribosomal subunit protein bL21-like superfamily (33.3%)" SISTHLLGSNASSVIR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006950 (14.3%) GO:1902021 (14.3%)" GO:0005737 (14.3%) "GO:0004017 (14.3%) GO:0004672 (14.3%) GO:0042803 (14.3%)" "response to stress (14.3%) regulation of bacterial-type flagellum-dependent cell motility (14.3%)" cytoplasm (14.3%) "AMP kinase activity (14.3%) protein kinase activity (14.3%) protein homodimerization activity (14.3%)" "IPR006016 (33.5%) IPR014729 (33.5%) IPR006015 (33.1%)" "UspA (33.5%) Rossmann-like alpha/beta/alpha sandwich fold (33.5%) Universal stress protein A family (33.1%)" VVGCTNDYEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25.3%) GO:0006099 (24.2%)" "GO:0004459 (25.3%) GO:0030060 (24.2%) GO:0016491 (1.1%)" "lactate metabolic process (25.3%) tricarboxylic acid cycle (24.2%)" "L-lactate dehydrogenase (NAD+) activity (25.3%) L-malate dehydrogenase (NAD+) activity (24.2%) oxidoreductase activity (1.1%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR011275 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 3 (16.7%)" LVDSLQLDSENINTWK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0009263 (19.4%) GO:0071897 (19.4%)" "GO:0004748 (20.4%) GO:0031419 (20.4%) GO:0005524 (19.4%)" "deoxyribonucleotide biosynthetic process (19.4%) DNA biosynthetic process (19.4%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.4%) cobalamin binding (20.4%) ATP binding (19.4%)" "IPR000788 (25.3%) IPR013344 (25.3%) IPR050862 (25.3%)" "Ribonucleotide reductase large subunit, C-terminal (25.3%) Ribonucleotide reductase, adenosylcobalamin-dependent (25.3%) Ribonucleoside diphosphate reductase class-2 (25.3%)" NNLVSLINLLELMPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) "GO:0006012 (33%) GO:0005996 (0.4%)" GO:0005829 (33.2%) "GO:0003978 (33.2%) GO:0016853 (0.2%)" "galactose metabolic process (33%) monosaccharide metabolic process (0.4%)" cytosol (33.2%) "UDP-glucose 4-epimerase activity (33.2%) isomerase activity (0.2%)" "IPR036291 (33.3%) IPR005886 (33.1%) IPR001509 (19%)" "NAD(P)-binding domain superfamily (33.3%) UDP-glucose 4-epimerase (33.1%) NAD-dependent epimerase/dehydratase (19%)" VITIDGNDPDAIRTALTEAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" GVDPSLDKEAIR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0015031 (18.1%) GO:0055085 (18.1%) GO:0015891 (13.7%)" "GO:0098797 (18.1%) GO:0030288 (13.7%)" GO:0031992 (18.1%) "protein transport (18.1%) transmembrane transport (18.1%) siderophore transport (13.7%)" "plasma membrane protein complex (18.1%) outer membrane-bounded periplasmic space (13.7%)" energy transducer activity (18.1%) "IPR006260 (25.5%) IPR037682 (25.5%) IPR051045 (25.5%)" "TonB/TolA, C-terminal (25.5%) TonB, C-terminal (25.5%) TonB-dependent transporter energy transducer (25.5%)" LLYVAPESLTKEENVDFLK Bacteroidota Bacteria Pseudomonadati Bacteroidota "5.6.2.4 (69.7%) 3.6.4.12 (30.3%)" "DNA 3'-5' helicase (69.7%) DNA helicase (30.3%)" "GO:0006260 (8.3%) GO:0006281 (8.3%) GO:0006310 (8.3%)" "GO:0005737 (8.3%) GO:0030894 (8.3%) GO:0043590 (8.3%)" "GO:0005524 (8.3%) GO:0009378 (8.3%) GO:0016787 (8.3%)" "DNA replication (8.3%) DNA repair (8.3%) DNA recombination (8.3%)" "cytoplasm (8.3%) replisome (8.3%) bacterial nucleoid (8.3%)" "ATP binding (8.3%) four-way junction helicase activity (8.3%) hydrolase activity (8.3%)" "IPR001650 (7.3%) IPR002121 (7.3%) IPR004589 (7.3%)" "Helicase, C-terminal domain-like (7.3%) HRDC domain (7.3%) DNA helicase, ATP-dependent, RecQ type (7.3%)" IQEGINALAGYAEIFQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.-.-.- (83.3%) 6.4.1.3 (16.7%)" "Ligases (83.3%) propionyl-CoA carboxylase (16.7%)" GO:0015977 (22.7%) GO:0009317 (22.7%) "GO:0004658 (23.7%) GO:0003989 (22.7%) GO:0016740 (7.9%)" carbon fixation (22.7%) acetyl-CoA carboxylase complex (22.7%) "propionyl-CoA carboxylase activity (23.7%) acetyl-CoA carboxylase activity (22.7%) transferase activity (7.9%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" DAPMFVMGVNNKAYDPSMNIVSNASCTTNCLAPLAK IYAVTGDSLNEVNEAVRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.5.1 (92.9%) 1.2.2.2 (7.1%)" "pyruvate dehydrogenase (quinone) (92.9%) Deleted entry (7.1%)" "GO:0019752 (24.1%) GO:0044281 (0.3%)" "GO:0030976 (25.9%) GO:0000287 (25%) GO:0003824 (20.3%)" "carboxylic acid metabolic process (24.1%) small molecule metabolic process (0.3%)" "thiamine pyrophosphate binding (25.9%) magnesium ion binding (25%) catalytic activity (20.3%)" "IPR012001 (11.5%) IPR029061 (11.5%) IPR047211 (11.5%)" "Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (11.5%) Thiamin diphosphate-binding fold (11.5%) Pyruvate oxidase/Pyruvate dehydrogenase [ubiquinone]-like (11.5%)" VAEDIITNSPYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.7%) IPR012944 (33.7%) IPR033985 (32.6%)" "Tetratricopeptide-like helical domain superfamily (33.7%) RagB/SusD domain (33.7%) SusD-like, N-terminal (32.6%)" VHVMSHALHYGTSVFEGIR root 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009098 (15.2%) GO:0009099 (15.2%) GO:0006532 (15.1%)" GO:0005829 (15.2%) "GO:0004084 (10.7%) GO:0052654 (4.9%) GO:0052655 (4.9%)" "L-leucine biosynthetic process (15.2%) L-valine biosynthetic process (15.2%) aspartate biosynthetic process (15.1%)" cytosol (15.2%) "branched-chain-amino-acid transaminase activity (10.7%) L-leucine-2-oxoglutarate transaminase activity (4.9%) L-valine-2-oxoglutarate transaminase activity (4.9%)" "IPR036038 (12.7%) IPR043131 (12.7%) IPR001544 (12.6%)" "Aminotransferase-like, PLP-dependent enzymes (12.7%) Branched-chain-amino-acid aminotransferase-like, N-terminal (12.7%) Aminotransferase class IV (12.6%)" CKDMYGHDVIIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola SKAYEAIVKGEPMPQPGIPESLNVLLHELR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (8%) IPR007641 (8%) IPR015712 (8%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (8%) RNA polymerase Rpb2, domain 7 (8%) DNA-directed RNA polymerase, subunit 2 (8%)" LAPAHFNQPMITGAPVVLTFCADANR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.5.1.38 (100%) FMN reductase (NADPH) (100%) "GO:0016491 (88.9%) GO:0052873 (11.1%)" "oxidoreductase activity (88.9%) FMN reductase (NADPH) activity (11.1%)" "IPR000415 (33.3%) IPR016446 (33.3%) IPR029479 (33.3%)" "Nitroreductase-like (33.3%) Flavin oxidoreductase Frp family (33.3%) Nitroreductase (33.3%)" NMLNFLENHDEQR Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.2.1.1 (66.7%) 3.2.1.135 (33.3%)" "alpha-amylase (66.7%) neopullulanase (33.3%)" GO:0009313 (47.8%) "GO:0004556 (47.8%) GO:0031216 (2.9%) GO:0043169 (1.4%)" oligosaccharide catabolic process (47.8%) "alpha-amylase activity (47.8%) neopullulanase activity (2.9%) cation binding (1.4%)" "IPR006047 (36.3%) IPR017853 (36.3%) IPR013780 (26.4%)" "Glycosyl hydrolase family 13, catalytic domain (36.3%) Glycoside hydrolase superfamily (36.3%) Glycosyl hydrolase, all-beta (26.4%)" VSILDHTAVIFTSR Bacteroidota Bacteria Pseudomonadati Bacteroidota 4.2.1.75 (100%) uroporphyrinogen-III synthase (100%) "GO:0006780 (32%) GO:0032259 (1%) GO:0033014 (1%)" GO:0005829 (32%) "GO:0004852 (33%) GO:0008168 (1%)" "uroporphyrinogen III biosynthetic process (32%) methylation (1%) tetrapyrrole biosynthetic process (1%)" cytosol (32%) "uroporphyrinogen-III synthase activity (33%) methyltransferase activity (1%)" "IPR003754 (33.8%) IPR036108 (33.3%) IPR039793 (32.8%)" "Tetrapyrrole biosynthesis, uroporphyrinogen III synthase (33.8%) Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily (33.3%) Uroporphyrinogen-III synthase (32.8%)" MECVMEHPYILIYDKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (19.2%) GO:0005737 (12%) "GO:0005524 (19.2%) GO:0140662 (19.2%) GO:0016853 (18.3%)" protein refolding (19.2%) cytoplasm (12%) "ATP binding (19.2%) ATP-dependent protein folding chaperone (19.2%) isomerase activity (18.3%)" "IPR001844 (17.8%) IPR002423 (17.8%) IPR027409 (17.3%)" "Chaperonin Cpn60/GroEL (17.8%) Chaperonin Cpn60/GroEL/TCP-1 family (17.8%) GroEL-like apical domain superfamily (17.3%)" VGMNDFIEAGFISSNQLVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR001196 (20%) IPR005749 (20%) IPR021131 (20%)" "Large ribosomal subunit protein uL15, conserved site (20%) Large ribosomal subunit protein uL15, bacteria (20%) Large ribosomal subunit protein uL15/eL18 (20%)" IIDLFGAFNDPHKEICALISGHR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.3.1 (100%) threonine synthase (100%) GO:0009088 (34.8%) "GO:0004795 (34.8%) GO:0030170 (30.4%)" threonine biosynthetic process (34.8%) "threonine synthase activity (34.8%) pyridoxal phosphate binding (30.4%)" "IPR001926 (14.5%) IPR004450 (14.5%) IPR029144 (14.5%)" "Tryptophan synthase beta chain-like, PALP domain (14.5%) Threonine synthase-like (14.5%) Threonine synthase, N-terminal (14.5%)" AGADRVELYTEPYATMYPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.6.99.2 (100%) pyridoxine 5'-phosphate synthase (100%) GO:0008615 (33.3%) GO:0005829 (33.3%) GO:0033856 (33.3%) pyridoxine biosynthetic process (33.3%) cytosol (33.3%) pyridoxine 5'-phosphate synthase activity (33.3%) "IPR004569 (35.5%) IPR013785 (32.3%) IPR036130 (32.3%)" "Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ (35.5%) Aldolase-type TIM barrel (32.3%) Pyridoxine 5'-phosphate synthase (32.3%)" AAVDAGFCDHDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033539 (33.3%) "GO:0009055 (33.3%) GO:0050660 (33.3%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (33.3%) "electron transfer activity (33.3%) flavin adenine dinucleotide binding (33.3%)" "IPR001308 (16.7%) IPR014729 (16.7%) IPR014730 (16.7%)" "Electron transfer flavoprotein alpha subunit/FixB (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.7%)" TSEQYYDEEAHQFLADR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.8%) GO:0005829 (16.8%) "GO:0004825 (16.8%) GO:0005524 (16.8%) GO:0000049 (16.3%)" methionyl-tRNA aminoacylation (16.8%) cytosol (16.8%) "methionine-tRNA ligase activity (16.8%) ATP binding (16.8%) tRNA binding (16.3%)" "IPR001412 (8.4%) IPR009080 (8.4%) IPR014729 (8.4%)" "Aminoacyl-tRNA synthetase, class I, conserved site (8.4%) Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (8.4%) Rossmann-like alpha/beta/alpha sandwich fold (8.4%)" HVNFVQDNHSK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 5.1.3.13 (100%) dTDP-4-dehydrorhamnose 3,5-epimerase (100%) "GO:0019305 (25%) GO:0000271 (21.9%) GO:0009103 (3.1%)" GO:0005829 (25%) GO:0008830 (25%) "dTDP-rhamnose biosynthetic process (25%) polysaccharide biosynthetic process (21.9%) lipopolysaccharide biosynthetic process (3.1%)" cytosol (25%) dTDP-4-dehydrorhamnose 3,5-epimerase activity (25%) "IPR000888 (33.3%) IPR011051 (33.3%) IPR014710 (33.3%)" "dTDP-4-dehydrorhamnose 3,5-epimerase-like (33.3%) RmlC-like cupin domain superfamily (33.3%) RmlC-like jelly roll fold (33.3%)" AAQTAQENGLDGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.15.5 (100%) peptidyl-dipeptidase Dcp (100%) GO:0006508 (19.2%) GO:0005829 (19.2%) "GO:0004180 (19.2%) GO:0004222 (19.2%) GO:0046872 (19.2%)" proteolysis (19.2%) cytosol (19.2%) "carboxypeptidase activity (19.2%) metalloendopeptidase activity (19.2%) metal ion binding (19.2%)" "IPR001567 (20%) IPR024077 (20%) IPR024079 (20%)" "Peptidase M3A/M3B catalytic domain (20%) Neurolysin/Thimet oligopeptidase, domain 2 (20%) Metallopeptidase, catalytic domain superfamily (20%)" GTETRDEDFVEHIYPATMHNTMMFFTQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (12.5%) GO:0006261 (12.4%)" "GO:0005737 (12.5%) GO:0009330 (12.5%) GO:0005694 (12.4%)" "GO:0003677 (12.5%) GO:0005524 (12.5%) GO:0034335 (12.4%)" "DNA topological change (12.5%) DNA-templated DNA replication (12.4%)" "cytoplasm (12.5%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.5%) chromosome (12.4%)" "DNA binding (12.5%) ATP binding (12.5%) DNA negative supercoiling activity (12.4%)" "IPR002205 (12.5%) IPR006691 (12.5%) IPR013757 (12.5%)" "DNA topoisomerase, type IIA, domain A (12.5%) DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.5%) DNA topoisomerase, type IIA, alpha-helical domain superfamily (12.5%)" NVSFSPDNNWLTYSR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.21.- (100%) Serine endopeptidases (100%) GO:0006508 (32.8%) GO:0005737 (32.8%) "GO:0008236 (32.8%) GO:0003743 (1.6%)" proteolysis (32.8%) cytoplasm (32.8%) "serine-type peptidase activity (32.8%) translation initiation factor activity (1.6%)" "IPR005151 (12.5%) IPR011659 (12.5%) IPR012393 (12.5%)" "Tail specific protease (12.5%) WD40-like beta-propeller (12.5%) Tricorn protease (12.5%)" TIKNDDQGFNSVFMMLDSGAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0000287 (16.3%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) magnesium ion binding (16.3%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" VSTHGQPLSAAGASIADTIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" EIDPELQILAFKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" MIVVPLKEGENIEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001911 (50%) IPR038380 (50%)" "Small ribosomal subunit protein bS21 (50%) Small ribosomal subunit protein bS21 superfamily (50%)" VGFFNPIASEKEEGTRLDLDR root "GO:0006412 (24.6%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0005737 (24.6%) GO:0015935 (24.6%) GO:0005840 (0.5%)" "GO:0003735 (24.8%) GO:0004519 (0.3%) GO:0000400 (0.1%)" "translation (24.6%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytoplasm (24.6%) small ribosomal subunit (24.6%) ribosome (0.5%)" "structural constituent of ribosome (24.8%) endonuclease activity (0.3%) four-way junction DNA binding (0.1%)" "IPR000307 (33.4%) IPR023803 (33.4%) IPR020592 (33.2%)" "Small ribosomal subunit protein bS16 (33.4%) Small ribosomal subunit protein bS16 domain superfamily (33.4%) Small ribosomal subunit protein bS16, conserved site (33.2%)" VLALDMGALVAGAK root "GO:0034605 (17.1%) GO:0042026 (15.3%) GO:0006508 (0.6%)" "GO:0005829 (14.6%) GO:0005737 (2.5%) GO:0005759 (0%)" "GO:0005524 (17.2%) GO:0016887 (17.1%) GO:0042802 (14.6%)" "cellular response to heat (17.1%) protein refolding (15.3%) proteolysis (0.6%)" "cytosol (14.6%) cytoplasm (2.5%) mitochondrial matrix (0%)" "ATP binding (17.2%) ATP hydrolysis activity (17.1%) identical protein binding (14.6%)" "IPR027417 (8.6%) IPR050130 (8.6%) IPR003959 (8.6%)" "P-loop containing nucleoside triphosphate hydrolase (8.6%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%) ATPase, AAA-type, core (8.6%)" GMPVSNFLSEEKLNEVAAATMVGGATLTK IGTVQDAVAYIEEHAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009245 (16.7%) "GO:0005829 (16.7%) GO:0016020 (16.7%)" "GO:0000035 (16.7%) GO:0000036 (16.7%) GO:0031177 (16.7%)" lipid A biosynthetic process (16.7%) "cytosol (16.7%) membrane (16.7%)" "acyl binding (16.7%) acyl carrier activity (16.7%) phosphopantetheine binding (16.7%)" "IPR003231 (20%) IPR006162 (20%) IPR009081 (20%)" "Acyl carrier protein (20%) Phosphopantetheine attachment site (20%) Phosphopantetheine binding ACP domain (20%)" GEGLVLQDNPAEKEYPMPLFLAGKDPVYVGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11%) GO:0009089 (11%) GO:0009097 (11%)" "GO:0004073 (11.3%) GO:0046983 (11.3%) GO:0050661 (11%)" "threonine biosynthetic process (11%) lysine biosynthetic process via diaminopimelate (11%) isoleucine biosynthetic process (11%)" "aspartate-semialdehyde dehydrogenase activity (11.3%) protein dimerization activity (11.3%) NADP binding (11%)" "IPR012280 (20.4%) IPR000534 (19.9%) IPR005986 (19.9%)" "Semialdehyde dehydrogenase, dimerisation domain (20.4%) Semialdehyde dehydrogenase, NAD-binding (19.9%) Aspartate-semialdehyde dehydrogenase, beta-type (19.9%)" TQIMAEREGEVVFVDATCIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.8%) GO:0006508 (7.9%)" GO:0000428 (16.8%) "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0032549 (16.8%)" "DNA-templated transcription (16.8%) proteolysis (7.9%)" DNA-directed RNA polymerase complex (16.8%) "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) ribonucleoside binding (16.8%)" "IPR007120 (7.4%) IPR007121 (7.4%) IPR007641 (7.4%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.4%) RNA polymerase, beta subunit, conserved site (7.4%) RNA polymerase Rpb2, domain 7 (7.4%)" HELASSAYNK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (19.9%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (19.9%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" YAPGEIYYDNTNKIVEGQTDK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR024311 (25%) IPR025112 (25%) IPR032186 (25%)" "Lipocalin-like domain (25%) Putative carbohydrate metabolism domain (25%) Domain of unknown function DUF5018 (25%)" NVVDFNAMDKDDEE Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" IILFIDEIHTLVGAGK root "GO:0034605 (19.3%) GO:0042026 (17.8%) GO:0006508 (2.4%)" "GO:0005737 (19.1%) GO:0005829 (0.2%)" "GO:0005524 (19.3%) GO:0016887 (19.3%) GO:0008233 (2.4%)" "cellular response to heat (19.3%) protein refolding (17.8%) proteolysis (2.4%)" "cytoplasm (19.1%) cytosol (0.2%)" "ATP binding (19.3%) ATP hydrolysis activity (19.3%) peptidase activity (2.4%)" "IPR003959 (8.5%) IPR050130 (8.5%) IPR027417 (8.5%)" "ATPase, AAA-type, core (8.5%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.5%) P-loop containing nucleoside triphosphate hydrolase (8.5%)" TLEFLGNVVPCTDKMPR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000795 (7.7%) IPR005225 (7.7%) IPR027417 (7.7%)" "Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%) P-loop containing nucleoside triphosphate hydrolase (7.7%)" FGAPHITKDGVTVAK Pseudomonadati Bacteria Pseudomonadati 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.1%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (16%) GO:1990220 (0%)" "GO:0005524 (17.1%) GO:0140662 (17.1%) GO:0016853 (16.6%)" "protein refolding (17.1%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (16%) GroEL-GroES complex (0%)" "ATP binding (17.1%) ATP-dependent protein folding chaperone (17.1%) isomerase activity (16.6%)" "IPR001844 (16.9%) IPR002423 (16.9%) IPR027413 (16.8%)" "Chaperonin Cpn60/GroEL (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%) GroEL-like equatorial domain superfamily (16.8%)" VALQAIEPIKEACQQADNPSLNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006298 (16.7%) GO:0005829 (16.7%) "GO:0003684 (16.7%) GO:0005524 (16.7%) GO:0030983 (16.7%)" mismatch repair (16.7%) cytosol (16.7%) "damaged DNA binding (16.7%) ATP binding (16.7%) mismatched DNA binding (16.7%)" "IPR000432 (8.3%) IPR005748 (8.3%) IPR007695 (8.3%)" "DNA mismatch repair protein MutS, C-terminal (8.3%) DNA mismatch repair protein MutS (8.3%) DNA mismatch repair protein MutS-like, N-terminal (8.3%)" GAYFANPCFAQIHPTCIPVHGDKQSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (15.3%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (15.3%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" SDGVPEDVEKDAEAEVQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006415 (33.3%) GO:0005737 (33.3%) GO:0043023 (33.3%) translational termination (33.3%) cytoplasm (33.3%) ribosomal large subunit binding (33.3%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" IKGEGDTIGGVLTCVIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.3.5 (100%) chorismate synthase (100%) "GO:0008652 (16.7%) GO:0009073 (16.7%) GO:0009423 (16.7%)" GO:0005829 (16.7%) "GO:0004107 (16.7%) GO:0010181 (16.7%)" "amino acid biosynthetic process (16.7%) aromatic amino acid family biosynthetic process (16.7%) chorismate biosynthetic process (16.7%)" cytosol (16.7%) "chorismate synthase activity (16.7%) FMN binding (16.7%)" "IPR000453 (33.3%) IPR020541 (33.3%) IPR035904 (33.3%)" "Chorismate synthase (33.3%) Chorismate synthase, conserved site (33.3%) Chorismate synthase AroC superfamily (33.3%)" ILGRFENPYLKDDVER root "1.1.1.17 (99.9%) 1.-.-.- (0.1%)" "mannitol-1-phosphate 5-dehydrogenase (99.9%) Oxidoreductases (0.1%)" GO:0019592 (33.2%) GO:0005829 (33.2%) "GO:0008926 (33.2%) GO:0016491 (0.3%)" mannitol catabolic process (33.2%) cytosol (33.2%) "mannitol-1-phosphate 5-dehydrogenase activity (33.2%) oxidoreductase activity (0.3%)" "IPR013118 (12.7%) IPR008927 (12.6%) IPR013328 (12.6%)" "Mannitol dehydrogenase, C-terminal (12.7%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (12.6%) 6-phosphogluconate dehydrogenase, domain 2 (12.6%)" DLIAYLEEKPEMAEHLAAVK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0006207 (16.6%) GO:0046132 (16.6%) GO:0044205 (15.8%)" "GO:0005737 (16.6%) GO:0005829 (0.2%)" "GO:0004588 (16.7%) GO:0000287 (15.8%) GO:0016757 (0.8%)" "'de novo' pyrimidine nucleobase biosynthetic process (16.6%) pyrimidine ribonucleoside biosynthetic process (16.6%) 'de novo' UMP biosynthetic process (15.8%)" "cytoplasm (16.6%) cytosol (0.2%)" "orotate phosphoribosyltransferase activity (16.7%) magnesium ion binding (15.8%) glycosyltransferase activity (0.8%)" "IPR029057 (25.6%) IPR000836 (25.1%) IPR004467 (24.7%)" "Phosphoribosyltransferase-like (25.6%) Phosphoribosyltransferase domain (25.1%) Orotate phosphoribosyl transferase domain (24.7%)" TEFNIEGYPCDKFIDLVLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.99.2 (100%) pyridoxine 5'-phosphate synthase (100%) GO:0008615 (33.3%) GO:0005829 (33.3%) GO:0033856 (33.3%) pyridoxine biosynthetic process (33.3%) cytosol (33.3%) pyridoxine 5'-phosphate synthase activity (33.3%) "IPR004569 (33.3%) IPR013785 (33.3%) IPR036130 (33.3%)" "Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ (33.3%) Aldolase-type TIM barrel (33.3%) Pyridoxine 5'-phosphate synthase (33.3%)" TSSTGTIFGSVTNIQVAEALAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000244 (14.3%) IPR009027 (14.3%) IPR020069 (14.3%)" "Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.3%) Large ribosomal subunit protein bL9, C-terminal (14.3%)" LYGFILGPGGLIDHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" TNNTSMLTSSLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" MADGPLAGLLAR Bacteria Bacteria "1.11.1.24 (90.4%) 1.11.1.- (9.6%)" "thioredoxin-dependent peroxiredoxin (90.4%) Peroxidases (9.6%)" GO:0034599 (1.3%) GO:0008379 (98.7%) cellular response to oxidative stress (1.3%) thioredoxin peroxidase activity (98.7%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" HIAHDFNDPLTWSHNRVEGK root "GO:0006457 (0.2%) GO:0006974 (0.2%) GO:0009408 (0.2%)" "GO:0005737 (19.5%) GO:0005829 (0.2%) GO:0005886 (0.2%)" "GO:0005524 (19.6%) GO:0016887 (19.6%) GO:0051082 (19.6%)" "protein folding (0.2%) DNA damage response (0.2%) response to heat (0.2%)" "cytoplasm (19.5%) cytosol (0.2%) plasma membrane (0.2%)" "ATP binding (19.6%) ATP hydrolysis activity (19.6%) unfolded protein binding (19.6%)" "IPR001404 (15%) IPR020568 (15%) IPR020575 (14.6%)" "Heat shock protein Hsp90 family (15%) Ribosomal protein uS5 domain 2-type superfamily (15%) Heat shock protein Hsp90, N-terminal (14.6%)" RGSLPIALDEVITDGHKR root "1.1.1.1 (53.9%) 1.2.1.10 (45.9%) 1.-.-.- (0.2%)" "alcohol dehydrogenase (53.9%) acetaldehyde dehydrogenase (acetylating) (45.9%) Oxidoreductases (0.2%)" "GO:0015976 (15.3%) GO:0006066 (15.2%) GO:0006115 (0%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0046872 (23%) GO:0004022 (20.8%) GO:0008774 (18.8%)" "carbon utilization (15.3%) alcohol metabolic process (15.2%) ethanol biosynthetic process (0%)" "cytosol (0%) membrane (0%)" "metal ion binding (23%) alcohol dehydrogenase (NAD+) activity (20.8%) acetaldehyde dehydrogenase (acetylating) activity (18.8%)" "IPR001670 (11.1%) IPR016162 (11.1%) IPR016163 (10.8%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (11.1%) Aldehyde dehydrogenase, N-terminal (11.1%) Aldehyde dehydrogenase, C-terminal (10.8%)" AVHDACYDKSYAIAASGNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (7.7%) IPR003029 (7.7%) IPR004087 (7.7%)" "Exoribonuclease, phosphorolytic domain 1 (7.7%) S1 domain (7.7%) K Homology domain (7.7%)" SFGAVGIGLCR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" AAVGAAVGYLAATDKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR024623 (100%) Uncharacterised protein family YtxH (100%) VLNFCIQDSPR Pseudomonadati Bacteria Pseudomonadati "1.3.5.1 (98.2%) 1.3.5.4 (1.8%)" "succinate dehydrogenase (98.2%) Transferred entry: 1.3.5.1 (1.8%)" GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (13.6%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (13.6%)" "IPR003953 (14.6%) IPR030664 (14.6%) IPR036188 (14.5%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.6%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (14.6%) FAD/NAD(P)-binding domain superfamily (14.5%)" HVDTVCISSYDHDNQR root "2.4.2.22 (93.5%) 2.4.2.- (6.4%) 3.1.1.1 (0.1%)" "xanthine phosphoribosyltransferase (93.5%) Pentosyltransferases (6.4%) carboxylesterase (0.1%)" "GO:0032263 (10.7%) GO:0032264 (10.7%) GO:0032265 (10.7%)" "GO:0005886 (10.7%) GO:0005829 (10.7%) GO:0032991 (0%)" "GO:0000310 (10.7%) GO:0004422 (10.7%) GO:0000287 (10%)" "GMP salvage (10.7%) IMP salvage (10.7%) XMP salvage (10.7%)" "plasma membrane (10.7%) cytosol (10.7%) protein-containing complex (0%)" "xanthine phosphoribosyltransferase activity (10.7%) hypoxanthine phosphoribosyltransferase activity (10.7%) magnesium ion binding (10%)" "IPR000836 (33.3%) IPR023747 (33.3%) IPR029057 (33.3%)" "Phosphoribosyltransferase domain (33.3%) Xanthine-guanine phosphoribosyltransferase (33.3%) Phosphoribosyltransferase-like (33.3%)" SKIFDFVKPGVITGDDVQKVFQVAK root "4.1.2.13 (99.8%) 4.1.2.- (0.2%)" "fructose-bisphosphate aldolase (99.8%) Aldehyde-lyases (0.2%)" "GO:0006094 (19.9%) GO:0006096 (19.9%)" GO:0005829 (19.9%) "GO:0004332 (20.1%) GO:0008270 (19.9%) GO:0016829 (0.2%)" "gluconeogenesis (19.9%) glycolytic process (19.9%)" cytosol (19.9%) "fructose-bisphosphate aldolase activity (20.1%) zinc ion binding (19.9%) lyase activity (0.2%)" "IPR000771 (33.3%) IPR006411 (33.3%) IPR013785 (33.3%)" "Fructose-bisphosphate aldolase, class-II (33.3%) Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype (33.3%) Aldolase-type TIM barrel (33.3%)" EILDENYKGEVVNHDVAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) GO:0033539 (32.3%) "GO:0009055 (32.3%) GO:0050660 (32.3%) GO:0016491 (3.2%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (32.3%) "electron transfer activity (32.3%) flavin adenine dinucleotide binding (32.3%) oxidoreductase activity (3.2%)" "IPR001308 (16.7%) IPR014729 (16.7%) IPR014730 (16.7%)" "Electron transfer flavoprotein alpha subunit/FixB (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.7%)" GIDKNEIKR root "3.6.5.3 (99.4%) 2.8.1.4 (0.6%)" "protein-synthesizing GTPase (99.4%) tRNA uracil 4-sulfurtransferase (0.6%)" "GO:0002937 (0.1%) GO:0009228 (0.1%) GO:0009229 (0.1%)" "GO:0005829 (19.1%) GO:0032045 (2.4%)" "GO:0003746 (19%) GO:0005525 (18.9%) GO:0003924 (18.8%)" "tRNA 4-thiouridine biosynthesis (0.1%) thiamine biosynthetic process (0.1%) thiamine diphosphate biosynthetic process (0.1%)" "cytosol (19.1%) guanyl-nucleotide exchange factor complex (2.4%)" "translation elongation factor activity (19%) GTP binding (18.9%) GTPase activity (18.8%)" "IPR004161 (8.3%) IPR009000 (8.3%) IPR033720 (8.3%)" "Translation elongation factor EFTu-like, domain 2 (8.3%) Translation protein, beta-barrel domain superfamily (8.3%) Elongation factor Tu, domain 2 (8.3%)" IDPILYNGQEIVPIQFLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR005097 (33.3%) IPR032095 (33.3%) IPR036291 (33.3%)" "Saccharopine dehydrogenase, NADP binding domain (33.3%) Saccharopine dehydrogenase-like, C-terminal (33.3%) NAD(P)-binding domain superfamily (33.3%)" KQPSELIATGIAGIDLNNTLVSGQK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (32%) GO:1902600 (32%) GO:0006811 (0.9%)" "GO:0005524 (32.7%) GO:0016787 (2.3%)" "ATP metabolic process (32%) proton transmembrane transport (32%) monoatomic ion transport (0.9%)" "ATP binding (32.7%) hydrolase activity (2.3%)" "IPR022879 (20.2%) IPR027417 (20.2%) IPR000194 (20.1%)" "V-type ATP synthase regulatory subunit B/beta (20.2%) P-loop containing nucleoside triphosphate hydrolase (20.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.1%)" VSGIRPVFEKLDCLDFDGLDAVFNK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR001509 (33.3%) IPR005886 (33.3%) IPR036291 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%)" AEIKNTTSDYDKEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (18%) GO:0005737 (15.3%) "GO:0005524 (18%) GO:0140662 (18%) GO:0016853 (15.3%)" protein refolding (18%) cytoplasm (15.3%) "ATP binding (18%) ATP-dependent protein folding chaperone (18%) isomerase activity (15.3%)" "IPR001844 (17.2%) IPR002423 (17.2%) IPR018370 (17.2%)" "Chaperonin Cpn60/GroEL (17.2%) Chaperonin Cpn60/GroEL/TCP-1 family (17.2%) Chaperonin Cpn60, conserved site (17.2%)" SKNSSIVLVAESEVTGGAMGVAER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0016208 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) AMP binding (9.1%)" "IPR000023 (16.7%) IPR012003 (16.7%) IPR012828 (16.7%)" "Phosphofructokinase domain (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic (16.7%)" MGGMETQLPTDALPHWELAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (24.6%) GO:0005737 (24.6%) "GO:0004828 (24.6%) GO:0005524 (24.6%) GO:0016874 (1.6%)" seryl-tRNA aminoacylation (24.6%) cytoplasm (24.6%) "serine-tRNA ligase activity (24.6%) ATP binding (24.6%) ligase activity (1.6%)" "IPR002314 (14.2%) IPR002317 (14.2%) IPR006195 (14.2%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (14.2%) Serine-tRNA ligase, type1 (14.2%) Aminoacyl-tRNA synthetase, class II (14.2%)" LADEEDVISAFHQLQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR007139 (100%) Protein of unknown function DUF349 (100%) VLSESEEEIAEQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006261 (12.5%) GO:0006265 (12.5%)" "GO:0005694 (12.5%) GO:0005737 (12.5%) GO:0009330 (12.5%)" "GO:0003677 (12.5%) GO:0005524 (12.5%) GO:0034335 (12.5%)" "DNA-templated DNA replication (12.5%) DNA topological change (12.5%)" "chromosome (12.5%) cytoplasm (12.5%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.5%)" "DNA binding (12.5%) ATP binding (12.5%) DNA negative supercoiling activity (12.5%)" "IPR002205 (12.5%) IPR005743 (12.5%) IPR006691 (12.5%)" "DNA topoisomerase, type IIA, domain A (12.5%) DNA gyrase, subunit A (12.5%) DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.5%)" HLAVAAPLIVNPGSEQIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" GHWDLSKVDYNEVEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "7.1.2.2 (96.8%) 3.6.3.14 (3.2%)" "H(+)-transporting two-sector ATPase (96.8%) Transferred entry: 7.1.2.2 (3.2%)" "GO:0045259 (22.5%) GO:0005886 (21.1%)" "GO:0005524 (22.5%) GO:0046933 (22.5%) GO:0016787 (9.2%)" "proton-transporting ATP synthase complex (22.5%) plasma membrane (21.1%)" "ATP binding (22.5%) proton-transporting ATP synthase activity, rotational mechanism (22.5%) hydrolase activity (9.2%)" "IPR000194 (10.2%) IPR005722 (10.2%) IPR020003 (10.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.2%) ATP synthase, F1 complex, beta subunit (10.2%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (10.2%)" AANDDLLNSFWLLDSEKGEAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006950 (0.1%) "GO:0005829 (47.5%) GO:0005737 (0.1%)" "GO:0008861 (47.5%) GO:0016829 (4%) GO:0003824 (0.6%)" response to stress (0.1%) "cytosol (47.5%) cytoplasm (0.1%)" "formate C-acetyltransferase activity (47.5%) lyase activity (4%) catalytic activity (0.6%)" "IPR001150 (25.2%) IPR011140 (24.9%) IPR050244 (24.9%)" "Glycine radical domain (25.2%) Autonomous glycyl radical cofactor GrcA (24.9%) Autonomous Glycyl Radical Cofactor (24.9%)" NGDGTPVECVIADGTIGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR004216 (11.1%) IPR005763 (11.1%) IPR009015 (11.1%)" "L-fucose/L-arabinose isomerase, C-terminal (11.1%) L-fucose isomerase (11.1%) L-fucose isomerase, N-terminal/central domain superfamily (11.1%)" SGGFAISLIEATPADKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.22 (100%) alpha-galactosidase (100%) "GO:0030246 (60.9%) GO:0016787 (31.5%) GO:0004557 (7.6%)" "carbohydrate binding (60.9%) hydrolase activity (31.5%) alpha-galactosidase activity (7.6%)" "IPR013785 (14.1%) IPR014718 (14.1%) IPR017853 (14.1%)" "Aldolase-type TIM barrel (14.1%) Glycoside hydrolase-type carbohydrate-binding (14.1%) Glycoside hydrolase superfamily (14.1%)" ANESAKDMTCQEFIDLNPK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:1990451 (32.6%) GO:0009268 (0.4%) GO:0010447 (0.4%)" "GO:0042597 (33.3%) GO:0030288 (0.4%)" GO:0051082 (33%) "cellular stress response to acidic pH (32.6%) response to pH (0.4%) response to acidic pH (0.4%)" "periplasmic space (33.3%) outer membrane-bounded periplasmic space (0.4%)" unfolded protein binding (33%) "IPR010486 (33.6%) IPR038303 (33.6%) IPR028623 (32.9%)" "HNS-dependent expression A/B (33.6%) HNS-dependent expression A/B superfamily (33.6%) HNS-dependent expression B (32.9%)" HIYHSATSNENPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.1 (100%) alpha-amylase (100%) GO:0009313 (50%) GO:0004556 (50%) oligosaccharide catabolic process (50%) alpha-amylase activity (50%) "IPR006047 (16.7%) IPR013780 (16.7%) IPR013783 (16.7%)" "Glycosyl hydrolase family 13, catalytic domain (16.7%) Glycosyl hydrolase, all-beta (16.7%) Immunoglobulin-like fold (16.7%)" YTQEEIDELVAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (21.2%) GO:0009263 (14%)" "GO:0004748 (21.6%) GO:0031419 (21.6%) GO:0005524 (14%)" "DNA biosynthetic process (21.2%) deoxyribonucleotide biosynthetic process (14%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (21.6%) cobalamin binding (21.6%) ATP binding (14%)" "IPR000788 (27.6%) IPR050862 (27.6%) IPR013344 (27.1%)" "Ribonucleotide reductase large subunit, C-terminal (27.6%) Ribonucleoside diphosphate reductase class-2 (27.6%) Ribonucleotide reductase, adenosylcobalamin-dependent (27.1%)" MIPGFEEGVKGHK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.6%) GO:0051301 (12.6%) GO:0043335 (12.1%)" GO:0005737 (12.6%) "GO:0003755 (12.6%) GO:0043022 (12.1%) GO:0044183 (12.1%)" "protein transport (12.6%) cell division (12.6%) protein unfolding (12.1%)" cytoplasm (12.6%) "peptidyl-prolyl cis-trans isomerase activity (12.6%) ribosome binding (12.1%) protein folding chaperone (12.1%)" "IPR001179 (12.6%) IPR005215 (12.6%) IPR008880 (12.6%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (12.6%) Trigger factor (12.6%) Trigger factor, C-terminal (12.6%)" YVVCNADEGDPGAFMDR root "1.12.1.3 (44.2%) 1.6.99.5 (31%) 1.6.5.11 (12.4%)" "hydrogen dehydrogenase (NADP(+)) (44.2%) Transferred entry: 1.6.5.11 (31%) Transferred entry: 1.6.5.9 (12.4%)" "GO:0046872 (25.6%) GO:0051539 (25.6%) GO:0008137 (22.6%)" "metal ion binding (25.6%) 4 iron, 4 sulfur cluster binding (25.6%) NADH dehydrogenase (ubiquinone) activity (22.6%)" "IPR011538 (12.1%) IPR037225 (12.1%) IPR019575 (11.8%)" "NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain (12.1%) NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily (12.1%) NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain (11.8%)" LEVHFLGIGIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.4 (100%) L-arabinose isomerase (100%) GO:0019569 (25.1%) GO:0005829 (25.1%) "GO:0008733 (25.1%) GO:0030145 (24%) GO:0046872 (0.7%)" L-arabinose catabolic process to D-xylulose 5-phosphate (25.1%) cytosol (25.1%) "L-arabinose isomerase activity (25.1%) manganese ion binding (24%) metal ion binding (0.7%)" "IPR003762 (14.4%) IPR024664 (14.4%) IPR055390 (14.4%)" "L-arabinose isomerase (14.4%) L-arabinose isomerase, C-terminal (14.4%) L-arabinose isomerase, central domain (14.4%)" DLGCPFEPPYQASVAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004839 (25%) IPR015421 (25%) IPR015424 (25%)" "Aminotransferase, class I/classII, large domain (25%) Pyridoxal phosphate-dependent transferase, major domain (25%) Pyridoxal phosphate-dependent transferase (25%)" EQCDLLVCGHHHSFINR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0000303 (1.1%) GO:0006950 (1.1%) GO:0009411 (1.1%)" "GO:0005737 (93.7%) GO:0005829 (1.1%)" GO:0042803 (1.1%) "response to superoxide (1.1%) response to stress (1.1%) response to UV (1.1%)" "cytoplasm (93.7%) cytosol (1.1%)" protein homodimerization activity (1.1%) "IPR006015 (33.3%) IPR006016 (33.3%) IPR014729 (33.3%)" "Universal stress protein A family (33.3%) UspA (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (33.3%)" AEDIEGLKTTESLPGEFPYVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" LASGGYIGGGLYHSQNLEGALTTLPGAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (29.2%) GO:0003863 (4.1%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (29.2%) branched-chain 2-oxo acid dehydrogenase activity (4.1%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" QIVANAGKEGAVIVQK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.1%) GO:0005737 (16.3%) "GO:0005524 (17.1%) GO:0140662 (17.1%) GO:0016853 (16.3%)" protein refolding (17.1%) cytoplasm (16.3%) "ATP binding (17.1%) ATP-dependent protein folding chaperone (17.1%) isomerase activity (16.3%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" DLLNEYEFPGDDTPIVR Bacillota Bacteria Bacillati Bacillota 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (19.8%) "GO:0003746 (20.8%) GO:0003924 (20.8%) GO:0005525 (20.8%)" cytosol (19.8%) "translation elongation factor activity (20.8%) GTPase activity (20.8%) GTP binding (20.8%)" "IPR000795 (8.9%) IPR005225 (8.9%) IPR031157 (8.9%)" "Translational (tr)-type GTP-binding domain (8.9%) Small GTP-binding domain (8.9%) Tr-type G domain, conserved site (8.9%)" AVVVTSGTTSEVLLNK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006865 (32.9%) GO:0015813 (0.2%) GO:0070778 (0.2%)" "GO:0005576 (32.6%) GO:0030288 (32.6%) GO:0016020 (0.2%)" "GO:0016595 (0.2%) GO:0070335 (0.2%)" "amino acid transport (32.9%) L-glutamate transmembrane transport (0.2%) L-aspartate transmembrane transport (0.2%)" "extracellular region (32.6%) outer membrane-bounded periplasmic space (32.6%) membrane (0.2%)" "glutamate binding (0.2%) aspartate binding (0.2%)" "IPR001638 (50%) IPR051455 (50%)" "Solute-binding protein family 3/N-terminal domain of MltF (50%) Bacterial solute-binding protein 3 (50%)" IYHVWLDKNVAIEDMEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" ECMENGHPYFSVASGGGTGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR025964 (100%) GGGtGRT protein (100%) DFIEIGTLMAHDALDRAESCGGHFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.5.1 (94.7%) 1.3.5.4 (5.3%)" "succinate dehydrogenase (94.7%) Transferred entry: 1.3.5.1 (5.3%)" GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (15.3%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (15.3%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" FINKPETGAVELESPFILLADKK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.2%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (16.8%) GO:1990220 (0%) GO:0005829 (0%)" "GO:0140662 (17.2%) GO:0005524 (17.2%) GO:0016853 (17.1%)" "protein refolding (17.2%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (16.8%) GroEL-GroES complex (0%) cytosol (0%)" "ATP-dependent protein folding chaperone (17.2%) ATP binding (17.2%) isomerase activity (17.1%)" "IPR001844 (17%) IPR027409 (17%) IPR002423 (17%)" "Chaperonin Cpn60/GroEL (17%) GroEL-like apical domain superfamily (17%) Chaperonin Cpn60/GroEL/TCP-1 family (17%)" TTDPNNVYLNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) "IPR000801 (20%) IPR013783 (20%) IPR014756 (20%)" "Esterase-like (20%) Immunoglobulin-like fold (20%) Immunoglobulin E-set (20%)" GDTVYVNAGEDKGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20.1%) "GO:0005840 (19.7%) GO:1990904 (19.7%) GO:0022625 (0.3%)" "GO:0003735 (20.1%) GO:0019843 (20.1%)" translation (20.1%) "ribosome (19.7%) ribonucleoprotein complex (19.7%) cytosolic large ribosomal subunit (0.3%)" "structural constituent of ribosome (20.1%) rRNA binding (20.1%)" "IPR003256 (16.8%) IPR005824 (16.8%) IPR008991 (16.8%)" "Large ribosomal subunit protein uL24 (16.8%) KOW (16.8%) Translation protein SH3-like domain superfamily (16.8%)" DFGSVDNFKAEFEK root 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0019430 (0.1%) GO:0006801 (0.1%) GO:0006979 (0.1%)" "GO:0005737 (32.9%) GO:0005829 (0.1%)" "GO:0004784 (33%) GO:0030145 (31.9%) GO:0046872 (0.9%)" "removal of superoxide radicals (0.1%) superoxide metabolic process (0.1%) response to oxidative stress (0.1%)" "cytoplasm (32.9%) cytosol (0.1%)" "superoxide dismutase activity (33%) manganese ion binding (31.9%) metal ion binding (0.9%)" "IPR036314 (16.8%) IPR001189 (16.8%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase, C-terminal domain superfamily (16.8%) Manganese/iron superoxide dismutase (16.8%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" VIVEVVEEEEQTVGGIVLANNAK Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus GO:0051085 (1.8%) GO:0005737 (16.4%) "GO:0005524 (16.4%) GO:0044183 (16.4%) GO:0046872 (16.4%)" obsolete chaperone cofactor-dependent protein refolding (1.8%) cytoplasm (16.4%) "ATP binding (16.4%) protein folding chaperone (16.4%) metal ion binding (16.4%)" "IPR011032 (25%) IPR018369 (25%) IPR020818 (25%)" "GroES-like superfamily (25%) Chaperonin GroES, conserved site (25%) GroES chaperonin family (25%)" GELNCIGATTFDEYR Clostridia Bacteria Bacillati Bacillota Clostridia "GO:0034605 (19.5%) GO:0042026 (19.5%) GO:0006508 (1.4%)" GO:0005737 (19.5%) "GO:0005524 (19.5%) GO:0016887 (19.5%) GO:0008233 (1.4%)" "cellular response to heat (19.5%) protein refolding (19.5%) proteolysis (1.4%)" cytoplasm (19.5%) "ATP binding (19.5%) ATP hydrolysis activity (19.5%) peptidase activity (1.4%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" GADRHEMDPDGGYVVSPER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25.3%) GO:0009341 (25.3%) "GO:0004565 (25.3%) GO:0030246 (24.2%)" lactose catabolic process (25.3%) beta-galactosidase complex (25.3%) "beta-galactosidase activity (25.3%) carbohydrate binding (24.2%)" "IPR006101 (7.2%) IPR006102 (7.2%) IPR006103 (7.2%)" "Glycoside hydrolase, family 2 (7.2%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.2%) Glycoside hydrolase family 2, catalytic domain (7.2%)" MGAYAIDLLLAGYGGR root 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (8.7%) GO:0030388 (8.7%) GO:0061621 (8.7%)" "GO:0005945 (8.7%) GO:0005737 (0.1%) GO:0005829 (0.1%)" "GO:0003872 (8.8%) GO:0005524 (8.7%) GO:0042802 (8.7%)" "fructose 6-phosphate metabolic process (8.7%) fructose 1,6-bisphosphate metabolic process (8.7%) canonical glycolysis (8.7%)" "6-phosphofructokinase complex (8.7%) cytoplasm (0.1%) cytosol (0.1%)" "6-phosphofructokinase activity (8.8%) ATP binding (8.7%) identical protein binding (8.7%)" "IPR035966 (17.6%) IPR000023 (17.4%) IPR015912 (17.2%)" "Phosphofructokinase superfamily (17.6%) Phosphofructokinase domain (17.4%) Phosphofructokinase, conserved site (17.2%)" KQGTTQIIVSAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" GNRVQVILECTEHKESGMPGMSR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20%) "GO:0005737 (20%) GO:0005840 (20%) GO:1990904 (20%)" GO:0003735 (20%) translation (20%) "cytoplasm (20%) ribosome (20%) ribonucleoprotein complex (20%)" structural constituent of ribosome (20%) "IPR001705 (33.3%) IPR011332 (33.3%) IPR038584 (33.3%)" "Large ribosomal subunit protein bL33 (33.3%) Zinc-binding ribosomal protein (33.3%) Large ribosomal subunit protein bL33 superfamily (33.3%)" VTAERNPADLKWDAIGAEYVVESTGLFLTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0006006 (25%) "GO:0050661 (25%) GO:0051287 (25%) GO:0004365 (17.6%)" glucose metabolic process (25%) "NADP binding (25%) NAD binding (25%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (17.6%)" "IPR006424 (17%) IPR020828 (17%) IPR020829 (17%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (17%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17%)" ILKVDPFQVLDQNGVGQLVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.7.9.1 (99.4%) 2.7.-.- (0.6%)" "pyruvate, phosphate dikinase (99.4%) Transferring phosphorus-containing groups (0.6%)" "GO:0050242 (25.3%) GO:0016301 (25.2%) GO:0046872 (24.7%)" "pyruvate, phosphate dikinase activity (25.3%) kinase activity (25.2%) metal ion binding (24.7%)" "IPR000121 (10.1%) IPR010121 (10.1%) IPR015813 (10.1%)" "PEP-utilising enzyme, C-terminal (10.1%) Pyruvate, phosphate dikinase (10.1%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (10.1%)" AWAEWEMDHIEMAVPISPEELR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.9%) GO:0006044 (32.9%)" "GO:0004342 (32.9%) GO:0016853 (1.3%)" "carbohydrate metabolic process (32.9%) N-acetylglucosamine metabolic process (32.9%)" "glucosamine-6-phosphate deaminase activity (32.9%) isomerase activity (1.3%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" AIKEVFGEHAFELNISSTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" VVFSVYEDDFKGTFNNDFASK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.4.1.21 (100%) starch synthase (100%) "GO:0016757 (92.9%) GO:0009011 (7.1%)" "glycosyltransferase activity (92.9%) alpha-1,4-glucan glucosyltransferase (ADP-glucose donor) activity (7.1%)" IPR013534 (100%) Starch synthase, catalytic domain (100%) VVTDPGDSQTLQAGQIVTAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" IIDDVLAHGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (7.7%) IPR003029 (7.7%) IPR004087 (7.7%)" "Exoribonuclease, phosphorolytic domain 1 (7.7%) S1 domain (7.7%) K Homology domain (7.7%)" AVDLFVDNAAVFASK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) "GO:0006437 (16.6%) GO:0043039 (0.3%)" GO:0005829 (16.7%) "GO:0003723 (16.9%) GO:0004831 (16.7%) GO:0005524 (16.6%)" "tyrosyl-tRNA aminoacylation (16.6%) tRNA aminoacylation (0.3%)" cytosol (16.7%) "RNA binding (16.9%) tyrosine-tRNA ligase activity (16.7%) ATP binding (16.6%)" "IPR054608 (12.7%) IPR024088 (12.6%) IPR036986 (12.6%)" "Tyrosine--tRNA ligase SYY-like, C-terminal domain (12.7%) Tyrosine-tRNA ligase, bacterial-type (12.6%) RNA-binding S4 domain superfamily (12.6%)" ALQAGTKKPTDIPDADRDFYLER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (16.8%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (16.8%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" VGMLRPITLWPFPTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.1 (50%) 1.2.-.- (20%) 1.2.7.7 (20%)" "pyruvate synthase (50%) Acting on the aldehyde or oxo group of donors (20%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) (20%)" "GO:0016491 (81.3%) GO:0019164 (12.5%) GO:0043807 (6.3%)" "oxidoreductase activity (81.3%) pyruvate synthase activity (12.5%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity (6.3%)" "IPR002880 (20%) IPR009014 (20%) IPR029061 (20%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%) Thiamin diphosphate-binding fold (20%)" RLLYSDNEDNTNTVEYQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" SLQAAEASDTDNPSTK root IPR025591 (100%) RloB-like protein (100%) TVGEFADTVEAALEK Collinsella aerofaciens Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella aerofaciens GO:0009245 (8.3%) "GO:0005737 (16.7%) GO:0005829 (8.3%) GO:0016020 (8.3%)" "GO:0000036 (25%) GO:0031177 (25%) GO:0000035 (8.3%)" lipid A biosynthetic process (8.3%) "cytoplasm (16.7%) cytosol (8.3%) membrane (8.3%)" "acyl carrier activity (25%) phosphopantetheine binding (25%) acyl binding (8.3%)" "IPR003231 (17.6%) IPR006162 (17.6%) IPR009081 (17.6%)" "Acyl carrier protein (17.6%) Phosphopantetheine attachment site (17.6%) Phosphopantetheine binding ACP domain (17.6%)" KPGSIGACSYPAK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (24.9%) "GO:0022625 (24.8%) GO:0005840 (0.2%) GO:1990904 (0.1%)" "GO:0003735 (24.9%) GO:0019843 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.8%) ribosome (0.2%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.9%) rRNA binding (24.9%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" AGISNNPNSPR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR019859 (20.7%) IPR022720 (20.7%) IPR048405 (20.7%)" "Gliding motility-associated protein GldM (20.7%) Gliding motility-associated protein GldM, N-terminal (20.7%) Gliding motility-associated protein GldM, first immunoglobulin-like domain (20.7%)" TYYEQQWLDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.1.33 (100%) tRNA (guanine(46)-N(7))-methyltransferase (100%) "GO:0030488 (0.3%) GO:0036265 (0.3%)" GO:0043527 (49.7%) GO:0008176 (49.7%) "tRNA methylation (0.3%) RNA (guanine-N7)-methylation (0.3%)" tRNA methyltransferase complex (49.7%) tRNA (guanine(46)-N7)-methyltransferase activity (49.7%) "IPR003358 (33.7%) IPR029063 (33.7%) IPR055361 (32.6%)" "tRNA (guanine-N-7) methyltransferase, Trmb type (33.7%) S-adenosyl-L-methionine-dependent methyltransferase superfamily (33.7%) tRNA (guanine-N(7)-)-methyltransferase TrmB, bacteria (32.6%)" RQYFNETDQTVNKK GVLPLASMFEER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (75%) GO:0004340 (25%)" "kinase activity (75%) glucokinase activity (25%)" "IPR000600 (33.3%) IPR043129 (33.3%) IPR049874 (33.3%)" "ROK family (33.3%) ATPase, nucleotide binding domain (33.3%) ROK, conserved site (33.3%)" NLTHTGLVASVDVSNVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001706 (25%) IPR018265 (25%) IPR021137 (25%)" "Large ribosomal subunit protein bL35 (25%) Large ribosomal subunit protein bL35, conserved site (25%) Large ribosomal subunit protein bL35-like (25%)" MDKYIDMLIPR root 1.2.1.41 (100%) glutamate-5-semialdehyde dehydrogenase (100%) "GO:0055129 (25.3%) GO:0006561 (0.1%)" "GO:0005737 (24.3%) GO:0005829 (0%)" "GO:0004350 (25.7%) GO:0050661 (24.2%) GO:0016491 (0.4%)" "L-proline biosynthetic process (25.3%) obsolete proline biosynthetic process (0.1%)" "cytoplasm (24.3%) cytosol (0%)" "glutamate-5-semialdehyde dehydrogenase activity (25.7%) NADP binding (24.2%) oxidoreductase activity (0.4%)" "IPR016161 (14.5%) IPR016162 (14.5%) IPR015590 (14.5%)" "Aldehyde/histidinol dehydrogenase (14.5%) Aldehyde dehydrogenase, N-terminal (14.5%) Aldehyde dehydrogenase domain (14.5%)" AWHSSSETIAK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "1.11.1.26 (99%) 1.11.1.15 (0.6%) 1.-.-.- (0.2%)" "NADH-dependent peroxiredoxin (99%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (0.6%) Oxidoreductases (0.2%)" "GO:0006979 (14.6%) GO:0042744 (14.6%) GO:0045454 (14.6%)" "GO:0005829 (14.6%) GO:0016020 (0.1%) GO:0005737 (0%)" "GO:0008379 (14.6%) GO:0102039 (11.9%) GO:0004601 (0.1%)" "response to oxidative stress (14.6%) hydrogen peroxide catabolic process (14.6%) cell redox homeostasis (14.6%)" "cytosol (14.6%) membrane (0.1%) cytoplasm (0%)" "thioredoxin peroxidase activity (14.6%) NADH-dependent peroxiredoxin activity (11.9%) peroxidase activity (0.1%)" "IPR000866 (14.4%) IPR036249 (14.4%) IPR050217 (14.4%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (14.4%) Thioredoxin-like superfamily (14.4%) Thiol-specific antioxidant peroxiredoxin (14.4%)" EMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "2.7.7.9 (99.8%) 2.7.7.- (0.2%)" "UTP--glucose-1-phosphate uridylyltransferase (99.8%) Nucleotidyltransferases (0.2%)" "GO:0006011 (33.2%) GO:0009103 (1.2%) GO:0009058 (0.1%)" "GO:0005829 (31.3%) GO:0016020 (0.1%) GO:0032991 (0.1%)" "GO:0003983 (33.2%) GO:0016779 (0.5%) GO:0000287 (0.1%)" "UDP-alpha-D-glucose metabolic process (33.2%) lipopolysaccharide biosynthetic process (1.2%) biosynthetic process (0.1%)" "cytosol (31.3%) membrane (0.1%) protein-containing complex (0.1%)" "UTP:glucose-1-phosphate uridylyltransferase activity (33.2%) nucleotidyltransferase activity (0.5%) magnesium ion binding (0.1%)" "IPR005771 (33.3%) IPR005835 (33.3%) IPR029044 (33.3%)" "UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type (33.3%) Nucleotidyl transferase domain (33.3%) Nucleotide-diphospho-sugar transferases (33.3%)" IVGTPGVGFGPSGEGYLR root 2.6.1.83 (100%) LL-diaminopimelate aminotransferase (100%) "GO:0033362 (31.6%) GO:0009089 (1.1%)" "GO:0010285 (33.7%) GO:0030170 (33.7%)" "lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway (31.6%) lysine biosynthetic process via diaminopimelate (1.1%)" "L,L-diaminopimelate aminotransferase activity (33.7%) pyridoxal phosphate binding (33.7%)" "IPR004839 (20.1%) IPR015422 (20.1%) IPR015424 (20.1%)" "Aminotransferase, class I/classII, large domain (20.1%) Pyridoxal phosphate-dependent transferase, small domain (20.1%) Pyridoxal phosphate-dependent transferase (20.1%)" DMGGLPDALFVIDADHEHIAIK root "GO:0006412 (33%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (33.1%) GO:0005840 (0.6%) GO:0005737 (0%)" "GO:0003735 (33.1%) GO:0008270 (0%)" "translation (33%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (33.1%) ribosome (0.6%) cytoplasm (0%)" "structural constituent of ribosome (33.1%) zinc ion binding (0%)" "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" LAASAIADVCTPGNPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.77 (100%) lactaldehyde reductase (100%) "GO:0004022 (40%) GO:0046872 (40%) GO:0008912 (20%)" "alcohol dehydrogenase (NAD+) activity (40%) metal ion binding (40%) lactaldehyde reductase activity (20%)" "IPR001670 (20%) IPR013460 (20%) IPR018211 (20%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (20%) Lactaldehyde reductase (20%) Alcohol dehydrogenase, iron-type, conserved site (20%)" TVDGPSKKDWR root "1.2.1.- (66.5%) 1.2.1.12 (32.1%) 1.2.1.13 (1.1%)" "With NAD(+) or NADP(+) as acceptor (66.5%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (32.1%) glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) (1.1%)" "GO:0006096 (14%) GO:0006006 (10.4%) GO:0006094 (5.4%)" "GO:0005829 (10.9%) GO:0005737 (2%) GO:0031514 (0.4%)" "GO:0051287 (16.5%) GO:0050661 (15.8%) GO:0004365 (14.5%)" "glycolytic process (14%) glucose metabolic process (10.4%) gluconeogenesis (5.4%)" "cytosol (10.9%) cytoplasm (2%) motile cilium (0.4%)" "NAD binding (16.5%) NADP binding (15.8%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (14.5%)" "IPR020829 (13%) IPR020831 (13%) IPR020830 (12.6%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (13%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (13%) Glyceraldehyde 3-phosphate dehydrogenase, active site (12.6%)" WVDHSISVTINLPNDVDEELVNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (22%) GO:0009263 (9.8%)" "GO:0004748 (22.5%) GO:0031419 (22.5%) GO:0000166 (12.7%)" "DNA biosynthetic process (22%) deoxyribonucleotide biosynthetic process (9.8%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (22.5%) cobalamin binding (22.5%) nucleotide binding (12.7%)" "IPR000788 (29.2%) IPR013344 (29.2%) IPR050862 (29.2%)" "Ribonucleotide reductase large subunit, C-terminal (29.2%) Ribonucleotide reductase, adenosylcobalamin-dependent (29.2%) Ribonucleoside diphosphate reductase class-2 (29.2%)" IGYFNIDSESTPDNLVFNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (25%) GO:0005829 (25%) "GO:0004819 (25%) GO:0005524 (25%)" glutaminyl-tRNA aminoacylation (25%) cytosol (25%) "glutamine-tRNA ligase activity (25%) ATP binding (25%)" "IPR000924 (11.1%) IPR004514 (11.1%) IPR011035 (11.1%)" "Glutamyl/glutaminyl-tRNA synthetase (11.1%) Glutamine-tRNA synthetase (11.1%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (11.1%)" WAYVVGSAIAIKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR025964 (100%) GGGtGRT protein (100%) HAGDSVLPNSNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (16.7%) "GO:0000287 (16.7%) GO:0004743 (16.7%) GO:0005524 (16.7%)" response to stress (16.7%) "magnesium ion binding (16.7%) pyruvate kinase activity (16.7%) ATP binding (16.7%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" GLKLEGATMDMLGTAEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.9%) GO:0005737 (16.1%) "GO:0005524 (16.9%) GO:0016853 (16.9%) GO:0140662 (16.9%)" protein refolding (16.9%) cytoplasm (16.1%) "ATP binding (16.9%) isomerase activity (16.9%) ATP-dependent protein folding chaperone (16.9%)" "IPR001844 (17.1%) IPR002423 (17.1%) IPR027409 (17.1%)" "Chaperonin Cpn60/GroEL (17.1%) Chaperonin Cpn60/GroEL/TCP-1 family (17.1%) GroEL-like apical domain superfamily (17.1%)" VKESQDQELLDFVAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.3.8.1 (100%) short-chain acyl-CoA dehydrogenase (100%) "GO:0050660 (50%) GO:0003995 (40%) GO:0016937 (10%)" "flavin adenine dinucleotide binding (50%) acyl-CoA dehydrogenase activity (40%) short-chain fatty acyl-CoA dehydrogenase activity (10%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009075 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.1%)" GALVDDIVYTIALTAIQSAQQQ root 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0006085 (24.4%) GO:0006083 (0.2%) GO:0019413 (0.2%)" "GO:0005737 (33%) GO:0005829 (0.2%)" "GO:0008959 (38.9%) GO:0016746 (1.2%) GO:0016407 (0.7%)" "acetyl-CoA biosynthetic process (24.4%) acetate metabolic process (0.2%) acetate biosynthetic process (0.2%)" "cytoplasm (33%) cytosol (0.2%)" "phosphate acetyltransferase activity (38.9%) acyltransferase activity (1.2%) acetyltransferase activity (0.7%)" "IPR002505 (12.2%) IPR050500 (12.1%) IPR042113 (11.6%)" "Phosphate acetyl/butaryl transferase (12.2%) Phosphate Acetyltransferase/Butyryltransferase (12.1%) Phosphate acetyltransferase, domain 1 (11.6%)" QVGIGHGNLAAMLLREETK Bacteria Bacteria IPR025964 (100%) GGGtGRT protein (100%) TINKLGLDAAIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001383 (25%) IPR026569 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL28, bacteria (25%) Large ribosomal subunit protein bL28 (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" SSILSSRDDIATTVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" KLSHEFTGTFTGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.1.3 (100%) glutamate dehydrogenase [NAD(P)(+)] (100%) GO:0006537 (26%) GO:0005829 (26%) "GO:0004354 (26%) GO:0000166 (22.1%)" glutamate biosynthetic process (26%) cytosol (26%) "glutamate dehydrogenase (NADP+) activity (26%) nucleotide binding (22.1%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" LCHTADGAVAAYHR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.2.1.5 (96.6%) 6.2.1.- (3.4%)" "succinate--CoA ligase (ADP-forming) (96.6%) Acid--thiol ligases (3.4%)" "GO:0006099 (13.3%) GO:0006104 (13.3%)" "GO:0005829 (13.3%) GO:0042709 (13.3%)" "GO:0000287 (13.3%) GO:0004775 (13.3%) GO:0005524 (13.3%)" "tricarboxylic acid cycle (13.3%) succinyl-CoA metabolic process (13.3%)" "cytosol (13.3%) succinate-CoA ligase complex (13.3%)" "magnesium ion binding (13.3%) succinate-CoA ligase (ADP-forming) activity (13.3%) ATP binding (13.3%)" "IPR005809 (16.7%) IPR005811 (16.7%) IPR013650 (16.7%)" "Succinate--CoA ligase-like, beta subunit (16.7%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (16.7%) ATP-grasp fold, succinyl-CoA synthetase-type (16.7%)" DAPMFVMGVNNDKYDPSMNIISNASCTTNCLAPLAK KLGCQSGIILTASHNPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.2 (90%) 5.4.2.- (10%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (90%) Phosphotransferases (phosphomutases) (10%)" "GO:0005975 (24%) GO:0006166 (24%)" "GO:0000287 (24%) GO:0008973 (24%) GO:0004614 (4%)" "carbohydrate metabolic process (24%) purine ribonucleoside salvage (24%)" "magnesium ion binding (24%) phosphopentomutase activity (24%) phosphoglucomutase activity (4%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" KDPSELTVEEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" ETFMLPEPFLVMATQNPIEQEGTYPLPEAQVDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR011703 (25%) IPR027417 (25%) IPR041628 (25%)" "ATPase, AAA-3 (25%) P-loop containing nucleoside triphosphate hydrolase (25%) ChlI/MoxR, AAA lid domain (25%)" IPGGGLKPIPGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.3.1 (100%) citrate (Si)-synthase (100%) "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (24.7%) "GO:0036440 (22.8%) GO:0046912 (2.2%) GO:0016746 (0.3%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (24.7%) "citrate synthase activity (22.8%) acyltransferase activity, acyl groups converted into alkyl on transfer (2.2%) acyltransferase activity (0.3%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" AATEHQYPVFVANVDGQPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (20%) GO:0005886 (20%) "GO:0005506 (20%) GO:0010181 (20%) GO:0016655 (20%)" sodium ion transport (20%) plasma membrane (20%) "iron ion binding (20%) FMN binding (20%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (20%)" "IPR007329 (25%) IPR010204 (25%) IPR024934 (25%)" "FMN-binding (25%) Na(+)-translocating NADH-quinone reductase subunit C (25%) Rubredoxin-like domain (25%)" EGVKTTASGLQYK Pseudomonadati Bacteria Pseudomonadati 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (47.6%) GO:0016020 (4.8%) GO:0003755 (47.6%) protein folding (47.6%) membrane (4.8%) peptidyl-prolyl cis-trans isomerase activity (47.6%) "IPR000774 (24.4%) IPR001179 (24.4%) IPR046357 (24.4%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (24.4%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (24.4%) Peptidyl-prolyl cis-trans isomerase domain superfamily (24.4%)" VSGNSPVIFDVTHALQCR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.5.1.55 (100%) 3-deoxy-8-phosphooctulonate synthase (100%) "GO:0019294 (30.9%) GO:0009103 (2.1%) GO:0046394 (0.4%)" "GO:0005737 (32.9%) GO:0005829 (0.1%) GO:0032991 (0.1%)" "GO:0008676 (33.1%) GO:0016740 (0.3%) GO:0042802 (0.1%)" "keto-3-deoxy-D-manno-octulosonic acid biosynthetic process (30.9%) lipopolysaccharide biosynthetic process (2.1%) carboxylic acid biosynthetic process (0.4%)" "cytoplasm (32.9%) cytosol (0.1%) protein-containing complex (0.1%)" "3-deoxy-8-phosphooctulonate synthase activity (33.1%) transferase activity (0.3%) identical protein binding (0.1%)" "IPR006218 (33.3%) IPR006269 (33.3%) IPR013785 (33.3%)" "DAHP synthetase I/KDSA (33.3%) 3-deoxy-8-phosphooctulonate synthase (33.3%) Aldolase-type TIM barrel (33.3%)" FKPGAELADAIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0030261 (11.5%) GO:0006270 (10.8%) GO:0006351 (10.8%)" "GO:0005829 (11.5%) GO:1990103 (10.8%) GO:1990178 (10.8%)" "GO:0003677 (11.5%) GO:0030527 (11.5%) GO:0042802 (10.8%)" "chromosome condensation (11.5%) DNA replication initiation (10.8%) DNA-templated transcription (10.8%)" "cytosol (11.5%) DnaA-HU complex (10.8%) HU-DNA complex (10.8%)" "DNA binding (11.5%) structural constituent of chromatin (11.5%) identical protein binding (10.8%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" MEAAGKPTDKPNLVCGPVQICWHK root 4.1.1.15 (100%) glutamate decarboxylase (100%) "GO:0006538 (21.3%) GO:0051454 (14.2%)" "GO:0005829 (21.3%) GO:0016020 (0.2%)" "GO:0004351 (21.3%) GO:0030170 (21.3%) GO:0016829 (0.5%)" "L-glutamate catabolic process (21.3%) intracellular pH elevation (14.2%)" "cytosol (21.3%) membrane (0.2%)" "glutamate decarboxylase activity (21.3%) pyridoxal phosphate binding (21.3%) lyase activity (0.5%)" "IPR002129 (20.9%) IPR010107 (20.9%) IPR015421 (20.9%)" "Pyridoxal phosphate-dependent decarboxylase (20.9%) Glutamate decarboxylase (20.9%) Pyridoxal phosphate-dependent transferase, major domain (20.9%)" VFKEWGGPGEPWVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR041662 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like 2 (50%)" IVMMQNENNLSAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006139 (19%) GO:0006412 (19%)" "GO:0005737 (19%) GO:0005840 (5.1%)" "GO:0003729 (19%) GO:0003735 (19%)" "nucleobase-containing compound metabolic process (19%) translation (19%)" "cytoplasm (19%) ribosome (5.1%)" "mRNA binding (19%) structural constituent of ribosome (19%)" "IPR003029 (7.1%) IPR006641 (7.1%) IPR010994 (7.1%)" "S1 domain (7.1%) YqgF/RNase H-like domain (7.1%) RuvA domain 2-like (7.1%)" TVEAASALEQGDLKR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.7.1.6 (100%) galactokinase (100%) "GO:0006012 (19.9%) GO:0033499 (0.1%)" "GO:0005829 (19.9%) GO:0005737 (0.1%)" "GO:0004335 (20%) GO:0005524 (19.9%) GO:0000287 (18.2%)" "galactose metabolic process (19.9%) galactose catabolic process via UDP-galactose, Leloir pathway (0.1%)" "cytosol (19.9%) cytoplasm (0.1%)" "galactokinase activity (20%) ATP binding (19.9%) magnesium ion binding (18.2%)" "IPR036554 (9.6%) IPR000705 (9.4%) IPR013750 (9.4%)" "GHMP kinase, C-terminal domain superfamily (9.6%) Galactokinase (9.4%) GHMP kinase, C-terminal domain (9.4%)" EMLLDAMENPEKYPQLTIR root 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (29.7%) GO:0005975 (0.1%) GO:0044814 (0.1%)" "GO:0005829 (31.7%) GO:0005737 (0.1%) GO:0005886 (0.1%)" "GO:0008861 (31.9%) GO:0016829 (5.4%) GO:0016746 (0.6%)" "glucose metabolic process (29.7%) carbohydrate metabolic process (0.1%) pyruvate fermentation via PFL (0.1%)" "cytosol (31.7%) cytoplasm (0.1%) plasma membrane (0.1%)" "formate C-acetyltransferase activity (31.9%) lyase activity (5.4%) acyltransferase activity (0.6%)" "IPR001150 (20.3%) IPR050244 (20.3%) IPR019777 (20.2%)" "Glycine radical domain (20.3%) Autonomous Glycyl Radical Cofactor (20.3%) Formate C-acetyltransferase glycine radical, conserved site (20.2%)" YLEGEEPTIEEIK Bacteria Bacteria GO:0032790 (19.3%) GO:0005737 (17%) "GO:0003746 (19.3%) GO:0005525 (19.3%) GO:0003924 (17%)" ribosome disassembly (19.3%) cytoplasm (17%) "translation elongation factor activity (19.3%) GTP binding (19.3%) GTPase activity (17%)" "IPR009000 (6.9%) IPR027417 (6.9%) IPR000640 (6.1%)" "Translation protein, beta-barrel domain superfamily (6.9%) P-loop containing nucleoside triphosphate hydrolase (6.9%) Elongation factor EFG, domain V-like (6.1%)" FVEDAIAAAPGLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.2.1 (100%) pantoate--beta-alanine ligase (AMP-forming) (100%) GO:0015940 (25%) GO:0005829 (25%) "GO:0004592 (25%) GO:0005524 (25%)" pantothenate biosynthetic process (25%) cytosol (25%) "pantoate-beta-alanine ligase activity (25%) ATP binding (25%)" "IPR003721 (33.3%) IPR014729 (33.3%) IPR042176 (33.3%)" "Pantoate-beta-alanine ligase (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (33.3%) Pantoate-beta-alanine ligase, C-terminal domain (33.3%)" ALMEYDESLRSELRK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (24.6%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0022627 (24.7%) GO:0005840 (0.9%) GO:0005737 (0.1%)" "GO:0003735 (24.7%) GO:0003723 (24.5%) GO:0000049 (0.3%)" "translation (24.6%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (24.7%) ribosome (0.9%) cytoplasm (0.1%)" "structural constituent of ribosome (24.7%) RNA binding (24.5%) tRNA binding (0.3%)" "IPR000754 (20%) IPR014721 (20%) IPR020568 (20%)" "Small ribosomal subunit protein uS9 (20%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (20%) Ribosomal protein uS5 domain 2-type superfamily (20%)" NKPHVNIGTIGHVDHGK root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0070125 (1.7%) GO:0006414 (0%) GO:0009658 (0%)" "GO:0005829 (12.2%) GO:0032045 (7.5%) GO:0005737 (1.9%)" "GO:0003746 (17.9%) GO:0003924 (17.9%) GO:0005525 (17.9%)" "mitochondrial translational elongation (1.7%) translational elongation (0%) chloroplast organization (0%)" "cytosol (12.2%) guanyl-nucleotide exchange factor complex (7.5%) cytoplasm (1.9%)" "translation elongation factor activity (17.9%) GTPase activity (17.9%) GTP binding (17.9%)" "IPR027417 (9.2%) IPR000795 (9.2%) IPR050055 (8.7%)" "P-loop containing nucleoside triphosphate hydrolase (9.2%) Translational (tr)-type GTP-binding domain (9.2%) Elongation factor Tu GTPase (8.7%)" TECMHCIAQAGGQIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" EVAQQAYDLYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" ELMLVHLHLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR011051 (33.3%) IPR013096 (33.3%) IPR014710 (33.3%)" "RmlC-like cupin domain superfamily (33.3%) Cupin 2, conserved barrel (33.3%) RmlC-like jelly roll fold (33.3%)" WLTPAYDAETQAEIKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.- (50%) 5.4.2.2 (50%)" "Phosphotransferases (phosphomutases) (50%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (50%)" "GO:0005975 (23.9%) GO:0006166 (23.9%)" "GO:0000287 (23.9%) GO:0008973 (23.9%) GO:0004614 (4.2%)" "carbohydrate metabolic process (23.9%) purine ribonucleoside salvage (23.9%)" "magnesium ion binding (23.9%) phosphopentomutase activity (23.9%) phosphoglucomutase activity (4.2%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" AGSATVLGALATQVENMIVSSADLSNSDKTDGFLKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.2.1.1 (95.5%) 2.2.1.- (4.5%)" "transketolase (95.5%) Transketolases and transaldolases (4.5%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" IMNVLGEPVDMKGEIGEEER root "7.1.2.2 (96.8%) 3.6.3.14 (3.2%)" "H(+)-transporting two-sector ATPase (96.8%) Transferred entry: 7.1.2.2 (3.2%)" GO:0042777 (0%) "GO:0045259 (23.8%) GO:0005886 (23.4%) GO:0016020 (0%)" "GO:0005524 (23.8%) GO:0046933 (23.8%) GO:0016787 (3.1%)" proton motive force-driven plasma membrane ATP synthesis (0%) "proton-transporting ATP synthase complex (23.8%) plasma membrane (23.4%) membrane (0%)" "ATP binding (23.8%) proton-transporting ATP synthase activity, rotational mechanism (23.8%) hydrolase activity (3.1%)" "IPR027417 (11.2%) IPR050053 (11.2%) IPR004100 (11.1%)" "P-loop containing nucleoside triphosphate hydrolase (11.2%) ATPase alpha/beta chains (11.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (11.1%)" AEAATAPEPVAQPQRPR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.3%) GO:0005829 (14.3%) "GO:0003723 (14.3%) GO:0004386 (14.3%) GO:0005524 (14.3%)" DNA-templated transcription termination (14.3%) cytosol (14.3%) "RNA binding (14.3%) helicase activity (14.3%) ATP binding (14.3%)" "IPR000194 (10%) IPR003593 (10%) IPR004665 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) Transcription termination factor Rho (10%)" IVSLQLNSVKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0034605 (20%) GO:0042026 (20%)" GO:0005737 (20%) "GO:0005524 (20%) GO:0016887 (20%)" "cellular response to heat (20%) protein refolding (20%)" cytoplasm (20%) "ATP binding (20%) ATP hydrolysis activity (20%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" LGIGPQGLTGNSSVMGVHIESAAR Bacteria Bacteria 4.2.1.32 (100%) L(+)-tartrate dehydratase (100%) "GO:0006099 (0.1%) GO:0044010 (0.1%) GO:1901275 (0.1%)" "GO:0005829 (0.1%) GO:1902494 (0.1%)" "GO:0046872 (32.9%) GO:0051539 (32.9%) GO:0016829 (23.2%)" "tricarboxylic acid cycle (0.1%) single-species biofilm formation (0.1%) tartrate metabolic process (0.1%)" "cytosol (0.1%) catalytic complex (0.1%)" "metal ion binding (32.9%) 4 iron, 4 sulfur cluster binding (32.9%) lyase activity (23.2%)" "IPR004646 (52.4%) IPR051208 (47.6%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (52.4%) Class-I Fumarase/Tartrate Dehydratase (47.6%)" SDIALIQIQNPK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "3.4.21.107 (98.1%) 3.4.21.- (1.9%)" "peptidase Do (98.1%) Serine endopeptidases (1.9%)" "GO:0051603 (28.1%) GO:0006515 (1.7%) GO:0006508 (0.8%)" "GO:0030313 (27.6%) GO:0042597 (5.7%) GO:0005886 (0.2%)" "GO:0004252 (30.2%) GO:0042802 (4.5%) GO:0008233 (0.2%)" "proteolysis involved in protein catabolic process (28.1%) protein quality control for misfolded or incompletely synthesized proteins (1.7%) proteolysis (0.8%)" "cell envelope (27.6%) periplasmic space (5.7%) plasma membrane (0.2%)" "serine-type endopeptidase activity (30.2%) identical protein binding (4.5%) peptidase activity (0.2%)" "IPR001940 (20.4%) IPR009003 (20.4%) IPR001478 (19.7%)" "Peptidase S1C (20.4%) Peptidase S1, PA clan (20.4%) PDZ domain (19.7%)" HLALLPFVTDMMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022627 (25%) "GO:0003735 (25%) GO:0070181 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "structural constituent of ribosome (25%) small ribosomal subunit rRNA binding (25%)" "IPR001648 (33.3%) IPR018275 (33.3%) IPR036870 (33.3%)" "Small ribosomal subunit protein bS18 (33.3%) Small ribosomal subunit protein bS18, conserved site (33.3%) Small ribosomal subunit protein bS18 superfamily (33.3%)" ESVQALIDCMQEFEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20.2%) GO:0008615 (18.9%)" GO:0005737 (20.2%) "GO:0004648 (20.2%) GO:0030170 (20.2%) GO:0008483 (0.5%)" "L-serine biosynthetic process (20.2%) pyridoxine biosynthetic process (18.9%)" cytoplasm (20.2%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20.2%) pyridoxal phosphate binding (20.2%) transaminase activity (0.5%)" "IPR022278 (20.2%) IPR000192 (20%) IPR015422 (20%)" "Phosphoserine aminotransferase (20.2%) Aminotransferase class V domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" GITEPTPTFSACFGAAFLSLHPTKYAEELVKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.5%) GO:0005829 (17.5%) "GO:0004612 (17.5%) GO:0005524 (17.5%) GO:0046872 (16.3%)" gluconeogenesis (17.5%) cytosol (17.5%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.5%) ATP binding (17.5%) metal ion binding (16.3%)" "IPR001272 (25.7%) IPR013035 (25.7%) IPR008210 (24.3%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.7%) Phosphoenolpyruvate carboxykinase, C-terminal (25.7%) Phosphoenolpyruvate carboxykinase, N-terminal (24.3%)" IQESPIESVEIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) GO:0000428 (16.8%) "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0000287 (16.1%)" DNA-templated transcription (16.8%) DNA-directed RNA polymerase complex (16.8%) "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) magnesium ion binding (16.1%)" "IPR007081 (9.2%) IPR045867 (9.2%) IPR000722 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.2%) DNA-directed RNA polymerase, subunit beta-prime (9.2%) RNA polymerase, alpha subunit (9.1%)" MSNLVTSVVKHDEER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0030490 (31.9%) GO:0006364 (1%) GO:0006974 (0.3%)" GO:0005829 (32.9%) GO:0043024 (32.9%) "maturation of SSU-rRNA (31.9%) rRNA processing (1%) DNA damage response (0.3%)" cytosol (32.9%) ribosomal small subunit binding (32.9%) "IPR015946 (25.1%) IPR023799 (25.1%) IPR000238 (24.9%)" "K homology domain-like, alpha/beta (25.1%) Ribosome-binding factor A domain superfamily (25.1%) Ribosome-binding factor A (24.9%)" RDYDMQNQNA Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (20%) GO:0022625 (20%) "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) cytosolic large ribosomal subunit (20%) "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000114 (20%) IPR016180 (20%) IPR020798 (20%)" "Large ribosomal subunit protein uL16, bacteria (20%) Large ribosomal subunit protein uL16 domain (20%) Large ribosomal subunit protein uL16, conserved site (20%)" MAADWALEFFNQLIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.12.99.6 (100%) hydrogenase (acceptor) (100%) GO:0030313 (32%) "GO:0008901 (32%) GO:0016151 (32%) GO:0033748 (4%)" cell envelope (32%) "ferredoxin hydrogenase activity (32%) nickel cation binding (32%) hydrogenase (acceptor) activity (4%)" "IPR001501 (25%) IPR018194 (25%) IPR029014 (25%)" "Nickel-dependent hydrogenase, large subunit (25%) Nickel-dependent hydrogenase, large subunit, nickel binding site (25%) [NiFe]-hydrogenase, large subunit (25%)" GIPVFNAPFSNTR root "1.1.1.95 (53.6%) 1.1.1.399 (46.4%) 1.1.1.290 (0%)" "phosphoglycerate dehydrogenase (53.6%) 2-oxoglutarate reductase (46.4%) 4-phosphoerythronate dehydrogenase (0%)" "GO:0006564 (13.9%) GO:0009070 (9%)" "GO:0005829 (7%) GO:0005737 (0.5%)" "GO:0051287 (23.2%) GO:0004617 (23.1%) GO:0047545 (22.9%)" "L-serine biosynthetic process (13.9%) serine family amino acid biosynthetic process (9%)" "cytosol (7%) cytoplasm (0.5%)" "NAD binding (23.2%) phosphoglycerate dehydrogenase activity (23.1%) (S)-2-hydroxyglutarate dehydrogenase activity (22.9%)" "IPR006139 (11.3%) IPR036291 (11.3%) IPR006140 (11.2%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (11.3%) NAD(P)-binding domain superfamily (11.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (11.2%)" LVVDQEDADGR root "1.5.1.34 (54.2%) 1.-.-.- (45.8%)" "6,7-dihydropteridine reductase (54.2%) Oxidoreductases (45.8%)" GO:0046256 (27.9%) "GO:0005829 (27.9%) GO:0016020 (0.2%)" "GO:0046857 (27.6%) GO:0004155 (14.3%) GO:0016491 (1%)" 2,4,6-trinitrotoluene catabolic process (27.9%) "cytosol (27.9%) membrane (0.2%)" "oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor (27.6%) 6,7-dihydropteridine reductase activity (14.3%) oxidoreductase activity (1%)" "IPR000415 (26.3%) IPR029479 (25.9%) IPR050627 (24.1%)" "Nitroreductase-like (26.3%) Nitroreductase (25.9%) Nitroreductase/BluB (24.1%)" TLILSDMLETGQSGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.1.1.1 (100%) alanine racemase (100%) "GO:0030632 (11.5%) GO:0008360 (10.6%) GO:0009252 (10.6%)" "GO:0005524 (11.5%) GO:0008784 (11.5%) GO:0030170 (11.5%)" "D-alanine biosynthetic process (11.5%) regulation of cell shape (10.6%) peptidoglycan biosynthetic process (10.6%)" "ATP binding (11.5%) alanine racemase activity (11.5%) pyridoxal phosphate binding (11.5%)" "IPR000821 (8.4%) IPR001608 (8.4%) IPR004101 (8.4%)" "Alanine racemase (8.4%) Alanine racemase, N-terminal (8.4%) Mur ligase, C-terminal (8.4%)" EFGTLRPILPDGTFYSPFDPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.8%) GO:0006516 (19.8%)" GO:0005829 (19.8%) "GO:0000224 (19.8%) GO:0030246 (19.1%) GO:0016798 (1.9%)" "carbohydrate metabolic process (19.8%) glycoprotein catabolic process (19.8%)" cytosol (19.8%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.8%) carbohydrate binding (19.1%) hydrolase activity, acting on glycosyl bonds (1.9%)" "IPR005887 (16.8%) IPR008928 (16.8%) IPR012939 (16.8%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.8%) Six-hairpin glycosidase superfamily (16.8%) Glycosyl hydrolase family 92 (16.8%)" INELKESFENVQTANDDIDLTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002319 (14.3%) IPR004188 (14.3%) IPR004529 (14.3%)" "Phenylalanyl-tRNA synthetase (14.3%) Phenylalanine-tRNA ligase, class II, N-terminal (14.3%) Phenylalanyl-tRNA synthetase, class IIc, alpha subunit (14.3%)" VYLTDAEYQEMIEAIKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.1.1.- (100%) Methyltransferases (100%) "GO:0009117 (45.8%) GO:0032259 (4.2%)" "GO:0003824 (41.7%) GO:0008168 (4.2%) GO:0016787 (4.2%)" "nucleotide metabolic process (45.8%) methylation (4.2%)" "catalytic activity (41.7%) methyltransferase activity (4.2%) hydrolase activity (4.2%)" "IPR001310 (33.3%) IPR011146 (33.3%) IPR036265 (33.3%)" "Histidine triad (HIT) protein (33.3%) HIT-like domain (33.3%) HIT-like superfamily (33.3%)" ITNIASDLFLVSLMEGVNR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola DIPAEDIVSKDVFDAAVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (71.4%) GO:0004340 (28.6%)" "kinase activity (71.4%) glucokinase activity (28.6%)" "IPR000600 (34.1%) IPR049874 (34.1%) IPR043129 (31.8%)" "ROK family (34.1%) ROK, conserved site (34.1%) ATPase, nucleotide binding domain (31.8%)" INPAGAPTYVPGEYK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.4%) GO:0043335 (12%) GO:0051083 (12%)" "GO:0005737 (11.3%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0003755 (12.4%) GO:0043022 (12%) GO:0044183 (12%)" "protein transport (12.4%) protein unfolding (12%) 'de novo' cotranslational protein folding (12%)" "cytoplasm (11.3%) cytosol (0.1%) membrane (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (12.4%) ribosome binding (12%) protein folding chaperone (12%)" "IPR008881 (13.1%) IPR036611 (13.1%) IPR005215 (12.8%)" "Trigger factor, ribosome-binding, bacterial (13.1%) Trigger factor ribosome-binding domain superfamily (13.1%) Trigger factor (12.8%)" QAEVHGMSQR Bacteria Bacteria "1.2.7.8 (90.6%) 1.2.7.1 (6.3%) 1.3.99.16 (3.1%)" "indolepyruvate ferredoxin oxidoreductase (90.6%) pyruvate synthase (6.3%) isoquinoline 1-oxidoreductase (3.1%)" GO:0016020 (11%) "GO:0016903 (80.5%) GO:0043805 (7.1%) GO:0019164 (0.6%)" membrane (11%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors (80.5%) indolepyruvate ferredoxin oxidoreductase activity (7.1%) pyruvate synthase activity (0.6%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052198 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) Indolepyruvate oxidoreductase subunit IorB-like (33.3%)" GGPGMQEMLYPTSYIK root "4.2.1.9 (100%) 4.-.-.- (0%) 2.7.1.35 (0%)" "dihydroxy-acid dehydratase (100%) Lyases (0%) pyridoxal kinase (0%)" "GO:0009097 (16.4%) GO:0009099 (16.4%) GO:0009082 (0.1%)" "GO:0005829 (16.7%) GO:0005886 (0%) GO:0016020 (0%)" "GO:0004160 (16.6%) GO:0051537 (16.5%) GO:0000287 (16.2%)" "isoleucine biosynthetic process (16.4%) L-valine biosynthetic process (16.4%) branched-chain amino acid biosynthetic process (0.1%)" "cytosol (16.7%) plasma membrane (0%) membrane (0%)" "dihydroxy-acid dehydratase activity (16.6%) 2 iron, 2 sulfur cluster binding (16.5%) magnesium ion binding (16.2%)" "IPR056740 (16.7%) IPR020558 (16.7%) IPR042096 (16.7%)" "Dihydroxy-acid/6-phosphogluconate dehydratase, C-terminal (16.7%) Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site (16.7%) Dihydroxy-acid dehydratase, C-terminal (16.7%)" ALVEAAAENDETLMEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.2%) "GO:0003746 (25.2%) GO:0005525 (25.2%) GO:0003924 (24.4%)" ribosome disassembly (25.2%) "translation elongation factor activity (25.2%) GTP binding (25.2%) GTPase activity (24.4%)" "IPR009000 (7.9%) IPR027417 (7.9%) IPR000640 (7.6%)" "Translation protein, beta-barrel domain superfamily (7.9%) P-loop containing nucleoside triphosphate hydrolase (7.9%) Elongation factor EFG, domain V-like (7.6%)" EAKEQENPAAFLAEKEAEYTK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0015977 (22.8%) GO:0009317 (22.8%) "GO:0003989 (22.8%) GO:0004658 (22.8%) GO:0016740 (8.8%)" carbon fixation (22.8%) acetyl-CoA carboxylase complex (22.8%) "acetyl-CoA carboxylase activity (22.8%) propionyl-CoA carboxylase activity (22.8%) transferase activity (8.8%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" QIPFLYASSAATYGGR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 5.1.3.20 (100%) ADP-glyceromanno-heptose 6-epimerase (100%) "GO:0097171 (22.2%) GO:0009244 (19.1%) GO:0005975 (6.8%)" "GO:0008712 (26.1%) GO:0050661 (25.8%)" "ADP-L-glycero-beta-D-manno-heptose biosynthetic process (22.2%) lipopolysaccharide core region biosynthetic process (19.1%) carbohydrate metabolic process (6.8%)" "ADP-glyceromanno-heptose 6-epimerase activity (26.1%) NADP binding (25.8%)" "IPR001509 (33.4%) IPR036291 (33.4%) IPR011912 (33.1%)" "NAD-dependent epimerase/dehydratase (33.4%) NAD(P)-binding domain superfamily (33.4%) ADP-L-glycero-D-manno-heptose-6-epimerase (33.1%)" GVELAPGESVPMVGVVEKPK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.7.7.9 (100%) UTP--glucose-1-phosphate uridylyltransferase (100%) "GO:0006011 (32.7%) GO:0009103 (1.8%) GO:0009058 (0.2%)" "GO:0005829 (31.5%) GO:0032991 (0.1%)" "GO:0003983 (32.7%) GO:0016779 (0.4%) GO:0000287 (0.1%)" "UDP-alpha-D-glucose metabolic process (32.7%) lipopolysaccharide biosynthetic process (1.8%) biosynthetic process (0.2%)" "cytosol (31.5%) protein-containing complex (0.1%)" "UTP:glucose-1-phosphate uridylyltransferase activity (32.7%) nucleotidyltransferase activity (0.4%) magnesium ion binding (0.1%)" "IPR005771 (33.3%) IPR005835 (33.3%) IPR029044 (33.3%)" "UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type (33.3%) Nucleotidyl transferase domain (33.3%) Nucleotide-diphospho-sugar transferases (33.3%)" IDLDALNQSTRPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.7%) IPR000795 (8.7%) IPR005225 (8.7%)" "Translation initiation factor IF-2, bacterial-like (8.7%) Translational (tr)-type GTP-binding domain (8.7%) Small GTP-binding domain (8.7%)" TTSSAAIATGLAQK root 3.6.1.3 (100%) Deleted entry (100%) "GO:0051782 (16.6%) GO:0000917 (16.2%) GO:0032506 (0.2%)" "GO:0005829 (16.7%) GO:0009898 (16.7%) GO:0005886 (0%)" "GO:0005524 (16.7%) GO:0016887 (16.7%) GO:0016787 (0%)" "negative regulation of cell division (16.6%) division septum assembly (16.2%) cytokinetic process (0.2%)" "cytosol (16.7%) cytoplasmic side of plasma membrane (16.7%) plasma membrane (0%)" "ATP binding (16.7%) ATP hydrolysis activity (16.7%) hydrolase activity (0%)" "IPR050625 (20.2%) IPR027417 (20.2%) IPR010223 (19.8%)" "ParA/MinD ATPase (20.2%) P-loop containing nucleoside triphosphate hydrolase (20.2%) ATP binding protein MinD (19.8%)" IGAAIGSGIGGLGLIEENHTSLMNGGPR root "2.3.1.179 (99.3%) 2.3.1.41 (0.7%)" "beta-ketoacyl-[acyl-carrier-protein] synthase II (99.3%) beta-ketoacyl-[acyl-carrier-protein] synthase I (0.7%)" "GO:0006633 (31.4%) GO:0006233 (0.2%) GO:0006260 (0.2%)" "GO:0005829 (31.2%) GO:0005886 (0.2%) GO:0009360 (0.2%)" "GO:0004315 (31.4%) GO:0003677 (0.2%) GO:0003887 (0.2%)" "fatty acid biosynthetic process (31.4%) dTDP biosynthetic process (0.2%) DNA replication (0.2%)" "cytosol (31.2%) plasma membrane (0.2%) DNA polymerase III complex (0.2%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (31.4%) DNA binding (0.2%) DNA-directed DNA polymerase activity (0.2%)" "IPR000794 (14.1%) IPR014030 (14.1%) IPR016039 (14.1%)" "Beta-ketoacyl synthase (14.1%) Beta-ketoacyl synthase-like, N-terminal (14.1%) Thiolase-like (14.1%)" RFPVSKPLDSDLLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" ALANFMFDSDEAMVR root "GO:0034605 (17.7%) GO:0042026 (14.6%) GO:0006508 (0.2%)" "GO:0005829 (13.7%) GO:0005737 (4.2%) GO:0016020 (0.2%)" "GO:0005524 (17.7%) GO:0016887 (17.7%) GO:0042802 (13.7%)" "cellular response to heat (17.7%) protein refolding (14.6%) proteolysis (0.2%)" "cytosol (13.7%) cytoplasm (4.2%) membrane (0.2%)" "ATP binding (17.7%) ATP hydrolysis activity (17.7%) identical protein binding (13.7%)" "IPR003959 (9%) IPR027417 (9%) IPR028299 (9%)" "ATPase, AAA-type, core (9%) P-loop containing nucleoside triphosphate hydrolase (9%) ClpA/B, conserved site 2 (9%)" KVLDAYIEIVTER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" AHIETSEKTAVGQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0017004 (25%) GO:0030313 (25%) "GO:0016209 (25%) GO:0016491 (25%)" cytochrome complex assembly (25%) cell envelope (25%) "antioxidant activity (25%) oxidoreductase activity (25%)" "IPR000866 (16.8%) IPR013766 (16.8%) IPR017937 (16.8%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.8%) Thioredoxin domain (16.8%) Thioredoxin, conserved site (16.8%)" YAGDNFSPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005980 (33.3%) "GO:0004134 (33.3%) GO:0004135 (33.3%)" glycogen catabolic process (33.3%) "4-alpha-glucanotransferase activity (33.3%) amylo-alpha-1,6-glucosidase activity (33.3%)" "IPR008928 (20%) IPR010401 (20%) IPR012341 (20%)" "Six-hairpin glycosidase superfamily (20%) Glycogen debranching enzyme (20%) Six-hairpin glycosidase-like superfamily (20%)" QLASVTVEDSR Bacteria Bacteria "GO:0002184 (33.2%) GO:0006412 (0.1%)" "GO:0005829 (33.2%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0043023 (33.2%) GO:0003746 (0.1%)" "cytoplasmic translational termination (33.2%) translation (0.1%)" "cytosol (33.2%) cytoplasm (0.1%) membrane (0.1%)" "ribosomal large subunit binding (33.2%) translation elongation factor activity (0.1%)" "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" TISENFGVLAADYITNESGELISR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" YRYEEDNSPLGVIGSFTYTEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0009279 (50%) GO:0044384 (50%)" "cell outer membrane (50%) host outer membrane (50%)" "IPR000758 (25.3%) IPR011250 (25.3%) IPR051723 (25.3%)" "Virulence-related outer membrane protein (25.3%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (25.3%) Bacterial Outer Membrane Invasion-Related Protein (25.3%)" TTPSVVAFTK root "3.6.4.10 (93.9%) 1.3.1.74 (2.4%) 2.4.2.1 (2.4%)" "non-chaperonin molecular chaperone ATPase (93.9%) 2-alkenal reductase [NAD(P)(+)] (2.4%) purine-nucleoside phosphorylase (2.4%)" "GO:0009408 (0.7%) GO:0006950 (0.4%) GO:0042026 (0.3%)" "GO:0005759 (5.6%) GO:0005737 (1.7%) GO:0005739 (0.3%)" "GO:0005524 (29.9%) GO:0140662 (29.9%) GO:0051082 (27.7%)" "response to heat (0.7%) response to stress (0.4%) protein refolding (0.3%)" "mitochondrial matrix (5.6%) cytoplasm (1.7%) mitochondrion (0.3%)" "ATP binding (29.9%) ATP-dependent protein folding chaperone (29.9%) unfolded protein binding (27.7%)" "IPR013126 (17.3%) IPR043129 (17.3%) IPR018181 (17.3%)" "Heat shock protein 70 family (17.3%) ATPase, nucleotide binding domain (17.3%) Heat shock protein 70, conserved site (17.3%)" VIPELDGKLTGMAFR root "1.2.1.12 (51.1%) 1.2.1.- (48.9%)" "glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (51.1%) With NAD(+) or NADP(+) as acceptor (48.9%)" "GO:0006006 (14.4%) GO:0006096 (10.6%) GO:0019682 (3.9%)" "GO:0005829 (9.9%) GO:0005634 (1.8%) GO:0005856 (1.8%)" "GO:0051287 (16.2%) GO:0004365 (15.5%) GO:0050661 (15.1%)" "glucose metabolic process (14.4%) glycolytic process (10.6%) glyceraldehyde-3-phosphate metabolic process (3.9%)" "cytosol (9.9%) nucleus (1.8%) cytoskeleton (1.8%)" "NAD binding (16.2%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (15.5%) NADP binding (15.1%)" "IPR020829 (16.7%) IPR020831 (16.7%) IPR020828 (15.7%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (15.7%)" IYADANGEPAEYNENNVPLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.14.- (100%) Dipeptidyl-peptidases and tripeptidyl-peptidases (100%) "GO:0043171 (25.2%) GO:0006508 (24.4%)" "GO:0008239 (25.2%) GO:0070009 (25.2%)" "peptide catabolic process (25.2%) proteolysis (24.4%)" "dipeptidyl-peptidase activity (25.2%) serine-type aminopeptidase activity (25.2%)" "IPR009003 (33.7%) IPR019500 (33.7%) IPR043504 (32.6%)" "Peptidase S1, PA clan (33.7%) Peptidase S46 (33.7%) Peptidase S1, PA clan, chymotrypsin-like fold (32.6%)" EIQTPLGIAPVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.4.2.9 (100%) uracil phosphoribosyltransferase (100%) "GO:0005525 (48.3%) GO:0016757 (41.4%) GO:0004845 (10.3%)" "GTP binding (48.3%) glycosyltransferase activity (41.4%) uracil phosphoribosyltransferase activity (10.3%)" "IPR000836 (50%) IPR029057 (50%)" "Phosphoribosyltransferase domain (50%) Phosphoribosyltransferase-like (50%)" AMLEDIAVLTGGTVISEEK Pseudomonadati Bacteria Pseudomonadati 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.8%) GO:0005737 (16.8%) "GO:0005524 (16.8%) GO:0016853 (16.8%) GO:0140662 (16.8%)" protein refolding (16.8%) cytoplasm (16.8%) "ATP binding (16.8%) isomerase activity (16.8%) ATP-dependent protein folding chaperone (16.8%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" ALVAVNLASEEPYHNALNEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006950 (0.2%) GO:0034644 (0.2%) GO:0044010 (0.2%)" GO:0005737 (98.8%) GO:0036094 (0.2%) "response to stress (0.2%) cellular response to UV (0.2%) single-species biofilm formation (0.2%)" cytoplasm (98.8%) small molecule binding (0.2%) "IPR006016 (97.6%) IPR006015 (2.4%)" "UspA (97.6%) Universal stress protein A family (2.4%)" QQKVDAYIIPSSDPHLSEYPADRWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.9 (100%) Xaa-Pro dipeptidase (100%) GO:0005737 (31.6%) "GO:0046872 (31.6%) GO:0070006 (31.6%) GO:0102009 (3.5%)" cytoplasm (31.6%) "metal ion binding (31.6%) metalloaminopeptidase activity (31.6%) proline dipeptidase activity (3.5%)" "IPR000587 (14.3%) IPR000994 (14.3%) IPR029149 (14.3%)" "Creatinase, N-terminal (14.3%) Peptidase M24 (14.3%) Creatinase/Aminopeptidase P/Spt16, N-terminal (14.3%)" HATNSELLCEAFLHAFTGQPLPTDEDLLKER Pasteurellaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae "GO:0009086 (20%) GO:0045892 (20%)" GO:0005737 (20%) "GO:0003677 (20%) GO:0003700 (20%)" "methionine biosynthetic process (20%) negative regulation of DNA-templated transcription (20%)" cytoplasm (20%) "DNA binding (20%) DNA-binding transcription factor activity (20%)" "IPR002084 (33.3%) IPR010985 (33.3%) IPR023453 (33.3%)" "Methionine repressor MetJ (33.3%) Ribbon-helix-helix (33.3%) Methionine repressor MetJ domain superfamily (33.3%)" SGDADGQLAGAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0008959 (55%) GO:0016407 (41.7%) GO:0016746 (3.3%)" "phosphate acetyltransferase activity (55%) acetyltransferase activity (41.7%) acyltransferase activity (3.3%)" "IPR002505 (16.9%) IPR050500 (16.9%) IPR004614 (16.6%)" "Phosphate acetyl/butaryl transferase (16.9%) Phosphate Acetyltransferase/Butyryltransferase (16.9%) Phosphate acetyltransferase (16.6%)" AMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKR root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (16.9%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (16.8%) GO:1990220 (0.1%) GO:0005829 (0%)" "GO:0140662 (16.9%) GO:0005524 (16.9%) GO:0016853 (16.8%)" "protein refolding (16.9%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (16.8%) GroEL-GroES complex (0.1%) cytosol (0%)" "ATP-dependent protein folding chaperone (16.9%) ATP binding (16.9%) isomerase activity (16.8%)" "IPR001844 (16.8%) IPR027409 (16.8%) IPR002423 (16.8%)" "Chaperonin Cpn60/GroEL (16.8%) GroEL-like apical domain superfamily (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%)" ENNIGKIEAETGAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0005507 (50%) cytoplasm (50%) copper ion binding (50%) "IPR005627 (50%) IPR036822 (50%)" "CutC-like (50%) CutC-like domain superfamily (50%)" LGEYLKPLAER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.1.1.6 (98.1%) 1.1.1.75 (1.9%)" "glycerol dehydrogenase (98.1%) (R)-aminopropanol dehydrogenase (1.9%)" "GO:0006091 (18.5%) GO:0019563 (18.5%) GO:0019588 (0.3%)" "GO:0005829 (19.3%) GO:0032991 (0.1%)" "GO:0008888 (19.6%) GO:0046872 (19.2%) GO:0019147 (3.2%)" "generation of precursor metabolites and energy (18.5%) glycerol catabolic process (18.5%) anaerobic glycerol catabolic process (0.3%)" "cytosol (19.3%) protein-containing complex (0.1%)" "glycerol dehydrogenase (NAD+) activity (19.6%) metal ion binding (19.2%) (R)-aminopropanol dehydrogenase activity (3.2%)" "IPR016205 (33.9%) IPR001670 (33.6%) IPR018211 (32.5%)" "Glycerol dehydrogenase (33.9%) Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (33.6%) Alcohol dehydrogenase, iron-type, conserved site (32.5%)" VKEFIAYLRPMLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 7.1.1.- (100%) Hydron translocation or charge separation linked to oxidoreductase reactions (100%) "GO:0005886 (15.8%) GO:0030964 (10.9%) GO:0005737 (9.9%)" "GO:0008137 (15.8%) GO:0048038 (15.8%) GO:0050136 (15.8%)" "plasma membrane (15.8%) NADH dehydrogenase complex (10.9%) cytoplasm (9.9%)" "NADH dehydrogenase (ubiquinone) activity (15.8%) quinone binding (15.8%) NADH dehydrogenase (quinone) (non-electrogenic) activity (15.8%)" "IPR001135 (17.6%) IPR001268 (17.6%) IPR022885 (17.6%)" "NADH-quinone oxidoreductase, subunit D (17.6%) NADH:ubiquinone oxidoreductase, 30kDa subunit (17.6%) NAD(P)H-quinone oxidoreductase subunit D/H (17.6%)" VGRNPEQLAVSSNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR015943 (17.7%) IPR051200 (17.7%) IPR003961 (16.1%)" "WD40/YVTN repeat-like-containing domain superfamily (17.7%) Multi-functional host-pathogen interaction and enzymatic activity protein (17.7%) Fibronectin type III (16.1%)" FDDTNPTKEDMEYVEAIQEDIR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (24.6%) GO:0005829 (24.6%) "GO:0004819 (24.6%) GO:0005524 (24.6%) GO:0016874 (1.6%)" glutaminyl-tRNA aminoacylation (24.6%) cytosol (24.6%) "glutamine-tRNA ligase activity (24.6%) ATP binding (24.6%) ligase activity (1.6%)" "IPR000924 (10%) IPR001412 (10%) IPR004514 (10%)" "Glutamyl/glutaminyl-tRNA synthetase (10%) Aminoacyl-tRNA synthetase, class I, conserved site (10%) Glutamine-tRNA synthetase (10%)" KQSAEKEYTVEEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" FADVYKGASPQLAIEKLEQLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0051301 (50%) GO:0009579 (50%) cell division (50%) thylakoid (50%) "IPR011990 (39.5%) IPR019734 (39.5%) IPR051685 (20.9%)" "Tetratricopeptide-like helical domain superfamily (39.5%) Tetratricopeptide repeat (39.5%) Ycf3/AcsC/BcsC/TPR Multifunctional (20.9%)" ENSDLYASLPEGVAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.4%) GO:0006002 (13.8%)" GO:0005829 (14.4%) "GO:0003872 (14.4%) GO:0005524 (14.4%) GO:0046872 (14.4%)" "response to glucose (14.4%) fructose 6-phosphate metabolic process (13.8%)" cytosol (14.4%) "6-phosphofructokinase activity (14.4%) ATP binding (14.4%) metal ion binding (14.4%)" "IPR000023 (25.3%) IPR011183 (25.3%) IPR035966 (25.3%)" "Phosphofructokinase domain (25.3%) Pyrophosphate-dependent phosphofructokinase PfpB (25.3%) Phosphofructokinase superfamily (25.3%)" TMADKLSAEIVDAFNNQGGAFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (20%) GO:0015935 (20%) "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) small ribosomal subunit (20%) "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" GYVPADENRDPNADMHVIAIDSIFTPIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.7%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.7%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011260 (16.7%) IPR011262 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.7%) DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" TEEYDIIHAHDWLTYPAGIHAK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 2.4.1.11 (100%) glycogen(starch) synthase (100%) GO:0009103 (42.9%) "GO:0016757 (47.6%) GO:0004373 (9.5%)" lipopolysaccharide biosynthetic process (42.9%) "glycosyltransferase activity (47.6%) alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (9.5%)" "IPR001296 (44.4%) IPR028098 (44.4%) IPR050194 (11.1%)" "Glycosyl transferase, family 1 (44.4%) Glycosyltransferase subfamily 4-like, N-terminal domain (44.4%) Glycosyltransferase group 1 (11.1%)" KLSDYPEPEPQVTDFIECVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (50%) GO:0016491 (40%) GO:0050112 (10%)" "nucleotide binding (50%) oxidoreductase activity (40%) inositol 2-dehydrogenase (NAD+) activity (10%)" "IPR000683 (20%) IPR006311 (20%) IPR036291 (20%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (20%) Twin-arginine translocation pathway, signal sequence (20%) NAD(P)-binding domain superfamily (20%)" FGVAAGSAATLNQGTR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006096 (0.1%) GO:0006974 (0.1%)" GO:0005829 (33%) "GO:0003872 (33.4%) GO:0005524 (33%) GO:0016740 (0.2%)" "glycolytic process (0.1%) DNA damage response (0.1%)" cytosol (33%) "6-phosphofructokinase activity (33.4%) ATP binding (33%) transferase activity (0.2%)" "IPR029056 (25.4%) IPR011611 (25.2%) IPR002173 (25%)" "Ribokinase-like (25.4%) Carbohydrate kinase PfkB (25.2%) Carbohydrate/purine kinase, PfkB, conserved site (25%)" GLVVGAAVGAAVGYLAATDKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR024623 (100%) Uncharacterised protein family YtxH (100%) MNQYETVFILTPVLSDVQMKEAVEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (16.9%) "GO:0005840 (17%) GO:0005737 (16.7%) GO:1990904 (15.7%)" "GO:0003735 (16.9%) GO:0070181 (16.7%) GO:0019843 (0.2%)" translation (16.9%) "ribosome (17%) cytoplasm (16.7%) ribonucleoprotein complex (15.7%)" "structural constituent of ribosome (16.9%) small ribosomal subunit rRNA binding (16.7%) rRNA binding (0.2%)" "IPR014717 (25.1%) IPR035980 (25.1%) IPR000529 (24.9%)" "Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25.1%) Small ribosomal subunit protein bS6 superfamily (25.1%) Small ribosomal subunit protein bS6 (24.9%)" TALIDHLDTMAER root 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0006879 (14%) GO:0030261 (14%) GO:0006950 (0.1%)" "GO:0005737 (14%) GO:0009295 (13.5%) GO:0016020 (0.1%)" "GO:0008199 (14.7%) GO:0016722 (14.7%) GO:0003677 (14%)" "intracellular iron ion homeostasis (14%) chromosome condensation (14%) response to stress (0.1%)" "cytoplasm (14%) nucleoid (13.5%) membrane (0.1%)" "ferric iron binding (14.7%) oxidoreductase activity, acting on metal ions (14.7%) DNA binding (14%)" "IPR002177 (16.8%) IPR008331 (16.8%) IPR009078 (16.8%)" "DNA-binding protein Dps (16.8%) Ferritin/DPS domain (16.8%) Ferritin-like superfamily (16.8%)" SQEIVDDLVKKGELTVEQGK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium IPR008769 (100%) Poly granule associated (100%) VIIATGEENVPDLVGLCEVENDHCLKDLTENSPLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0004519 (59.3%) GO:0003824 (22.2%) GO:0004527 (18.5%)" "endonuclease activity (59.3%) catalytic activity (22.2%) exonuclease activity (18.5%)" "IPR005135 (50%) IPR036691 (50%)" "Endonuclease/exonuclease/phosphatase (50%) Endonuclease/exonuclease/phosphatase superfamily (50%)" LIIEPNYEQLSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (13.6%) GO:0005737 (0.6%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (13.6%) cytoplasm (0.6%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" AWPSMGQQLGAVHSLSVDQCPFER Bacteria Bacteria "2.7.1.95 (99.6%) 2.7.1.87 (0.4%)" "kanamycin kinase (99.6%) streptomycin 3''-kinase (0.4%)" "GO:0046677 (24.6%) GO:0019748 (0.1%)" "GO:0005524 (24.6%) GO:0046872 (20.1%) GO:0008910 (19.2%)" "response to antibiotic (24.6%) secondary metabolic process (0.1%)" "ATP binding (24.6%) metal ion binding (20.1%) kanamycin kinase activity (19.2%)" "IPR002575 (26%) IPR011009 (26%) IPR024165 (24.9%)" "Aminoglycoside phosphotransferase (26%) Protein kinase-like domain superfamily (26%) Aminoglycoside 3-phosphotransferase (24.9%)" NSINYELVNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.95 (66.7%) 1.1.1.81 (33.3%)" "phosphoglycerate dehydrogenase (66.7%) hydroxypyruvate reductase (33.3%)" "GO:0051287 (50%) GO:0016616 (40%) GO:0004617 (7.5%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (40%) phosphoglycerate dehydrogenase activity (7.5%)" "IPR006139 (33.3%) IPR006140 (33.3%) IPR036291 (33.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" ELVHMLPSTQYQQLVGNLNQR Escherichia coli Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli LKQGIESATQKK root "GO:0006974 (0.4%) GO:0042542 (0.4%)" GO:0005829 (48.9%) "GO:0000166 (48.9%) GO:0000049 (0.4%) GO:0005524 (0.4%)" "DNA damage response (0.4%) response to hydrogen peroxide (0.4%)" cytosol (48.9%) "nucleotide binding (48.9%) tRNA binding (0.4%) ATP binding (0.4%)" "IPR007551 (25.2%) IPR036183 (25.2%) IPR035571 (25%)" "Nucleotide-binding protein YajQ/Smlt4090-like (25.2%) YajQ-like superfamily (25.2%) UPF0234-like, C-terminal (25%)" LIRYEGEAAHYCPNETACPPQIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.5.1.2 (100%) DNA ligase (NAD(+)) (100%) "GO:0006260 (16.8%) GO:0006281 (16.8%)" GO:0005829 (16.3%) "GO:0003911 (16.8%) GO:0046872 (16.8%) GO:0003677 (16.5%)" "DNA replication (16.8%) DNA repair (16.8%)" cytosol (16.3%) "DNA ligase (NAD+) activity (16.8%) metal ion binding (16.8%) DNA binding (16.5%)" "IPR004149 (8.5%) IPR004150 (8.5%) IPR010994 (8.5%)" "Zinc-finger, NAD-dependent DNA ligase C4-type (8.5%) NAD-dependent DNA ligase, OB-fold (8.5%) RuvA domain 2-like (8.5%)" ANLPGYLGNCHSSGTVILDELGEEHMK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 5.4.2.7 (100%) phosphopentomutase (100%) "GO:0009117 (13.1%) GO:0043094 (13.1%) GO:0006018 (12.9%)" GO:0005829 (13.1%) "GO:0000287 (13.1%) GO:0008973 (13.1%) GO:0030145 (12.9%)" "nucleotide metabolic process (13.1%) metabolic compound salvage (13.1%) 2-deoxyribose 1-phosphate catabolic process (12.9%)" cytosol (13.1%) "magnesium ion binding (13.1%) phosphopentomutase activity (13.1%) manganese ion binding (12.9%)" "IPR006124 (25%) IPR010045 (25%) IPR017850 (25%)" "Metalloenzyme (25%) Phosphopentomutase (25%) Alkaline-phosphatase-like, core domain superfamily (25%)" YNPEETSKDPEER Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (25%) IPR015824 (25%) IPR015911 (25%)" "Phosphoglycerate kinase (25%) Phosphoglycerate kinase, N-terminal (25%) Phosphoglycerate kinase, conserved site (25%)" NIALKEPLELQVVGANPVEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (20%) GO:0005829 (20%) "GO:0002161 (20%) GO:0004832 (20%) GO:0005524 (20%)" valyl-tRNA aminoacylation (20%) cytosol (20%) "aminoacyl-tRNA deacylase activity (20%) valine-tRNA ligase activity (20%) ATP binding (20%)" "IPR001412 (9.1%) IPR002300 (9.1%) IPR002303 (9.1%)" "Aminoacyl-tRNA synthetase, class I, conserved site (9.1%) Aminoacyl-tRNA synthetase, class Ia (9.1%) Valine-tRNA ligase (9.1%)" GQPLSTSEFTR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.42 (100%) isocitrate dehydrogenase (NADP(+)) (100%) "GO:0006097 (20%) GO:0006099 (20%)" "GO:0000287 (20%) GO:0004450 (20%) GO:0051287 (20%)" "glyoxylate cycle (20%) tricarboxylic acid cycle (20%)" "magnesium ion binding (20%) isocitrate dehydrogenase (NADP+) activity (20%) NAD binding (20%)" "IPR004439 (33.3%) IPR019818 (33.3%) IPR024084 (33.3%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (33.3%) Isocitrate/isopropylmalate dehydrogenase, conserved site (33.3%) Isopropylmalate dehydrogenase-like domain (33.3%)" TLEKDGYEAVQLGFQEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" ALFITNPSNPPSYTLSPETAAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "4.1.1.12 (94.1%) 2.6.1.1 (5.9%)" "aspartate 4-decarboxylase (94.1%) aspartate transaminase (5.9%)" GO:0006520 (27.3%) "GO:0030170 (27.3%) GO:0008483 (24.7%) GO:0047688 (10.4%)" amino acid metabolic process (27.3%) "pyridoxal phosphate binding (27.3%) transaminase activity (24.7%) aspartate 4-decarboxylase activity (10.4%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" VLDCVQTGYTLFDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006457 (16.7%) GO:0005737 (16.7%) "GO:0000774 (16.7%) GO:0042803 (16.7%) GO:0051082 (16.7%)" protein folding (16.7%) cytoplasm (16.7%) "adenyl-nucleotide exchange factor activity (16.7%) protein homodimerization activity (16.7%) unfolded protein binding (16.7%)" "IPR000740 (33.3%) IPR009012 (33.3%) IPR013805 (33.3%)" "GrpE nucleotide exchange factor (33.3%) GrpE nucleotide exchange factor, head (33.3%) GrpE nucleotide exchange factor, coiled-coil (33.3%)" LAVSQEMSKEETLQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0110001 (6.7%) "GO:0005524 (80%) GO:0004540 (6.7%) GO:0016787 (6.7%)" toxin-antitoxin complex (6.7%) "ATP binding (80%) RNA nuclease activity (6.7%) hydrolase activity (6.7%)" "IPR012547 (33.3%) IPR018631 (33.3%) IPR027417 (32.1%)" "PD-(D/E)XK nuclease superfamily 9 (33.3%) AAA-ATPase-like domain (33.3%) P-loop containing nucleoside triphosphate hydrolase (32.1%)" YFDEAANLETDATSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (44%) IPR019734 (44%) IPR013105 (12%)" "Tetratricopeptide-like helical domain superfamily (44%) Tetratricopeptide repeat (44%) Tetratricopeptide repeat 2 (12%)" AREILKDETIAVIGYGVQGPGQSLNLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.86 (100%) ketol-acid reductoisomerase (NADP(+)) (100%) "GO:0009097 (22%) GO:0009099 (22%)" "GO:0004455 (22%) GO:0046872 (22%) GO:0016853 (12%)" "isoleucine biosynthetic process (22%) L-valine biosynthetic process (22%)" "ketol-acid reductoisomerase activity (22%) metal ion binding (22%) isomerase activity (12%)" "IPR000506 (16.7%) IPR008927 (16.7%) IPR013023 (16.7%)" "Ketol-acid reductoisomerase, C-terminal (16.7%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.7%) Ketol-acid reductoisomerase (16.7%)" LIDFHAPWCGYCKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR013766 (33.3%) IPR017937 (33.3%) IPR036249 (33.3%)" "Thioredoxin domain (33.3%) Thioredoxin, conserved site (33.3%) Thioredoxin-like superfamily (33.3%)" HSVQNASYENKDPLLIYKLESYNLFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (11.1%) GO:0008564 (0.4%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (11.1%) protein-exporting ATPase activity (0.4%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" LATQYLADAKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.2%) GO:0017038 (11.2%) GO:0043952 (11.1%)" "GO:0005886 (11.2%) GO:0005829 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.2%) GO:0046872 (10.7%) GO:0008564 (0.1%)" "protein targeting (11.2%) protein import (11.2%) protein transport by the Sec complex (11.1%)" "plasma membrane (11.2%) cytosol (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.2%) metal ion binding (10.7%) protein-exporting ATPase activity (0.1%)" "IPR000185 (7.8%) IPR011115 (7.8%) IPR014001 (7.8%)" "Protein translocase subunit SecA (7.8%) SecA DEAD-like, N-terminal (7.8%) Helicase superfamily 1/2, ATP-binding domain (7.8%)" LGIVKPWNSTWFANTKEFADNLDSDFK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (19.9%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (19.9%) GO:0005840 (0.5%) GO:0005737 (0%)" "GO:0019843 (20%) GO:0003735 (19.9%) GO:0003729 (19.5%)" "translation (19.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (19.9%) ribosome (0.5%) cytoplasm (0%)" "rRNA binding (20%) structural constituent of ribosome (19.9%) mRNA binding (19.5%)" "IPR009019 (11.3%) IPR015946 (11.3%) IPR004044 (11.3%)" "K homology domain superfamily, prokaryotic type (11.3%) K homology domain-like, alpha/beta (11.3%) K Homology domain, type 2 (11.3%)" VSQALDILTYTNKK root "GO:0006412 (24.8%) GO:0002181 (0%) GO:0042255 (0%)" "GO:0022625 (24.7%) GO:0005840 (0.6%) GO:0005737 (0%)" "GO:0003735 (24.8%) GO:0019843 (24.7%) GO:0003729 (0%)" "translation (24.8%) cytoplasmic translation (0%) ribosome assembly (0%)" "cytosolic large ribosomal subunit (24.7%) ribosome (0.6%) cytoplasm (0%)" "structural constituent of ribosome (24.8%) rRNA binding (24.7%) mRNA binding (0%)" "IPR001063 (20%) IPR036394 (20%) IPR047867 (20%)" "Large ribosomal subunit protein uL22 (20%) Ribosomal protein uL22 superfamily (20%) Large ribosomal subunit protein uL22, bacteria/organella (20%)" FISSDENIASVNKDGLITAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" DISLAHSMISLGSCTMK root 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.6%) "GO:0005960 (16.6%) GO:0005829 (15%) GO:0005739 (1.7%)" "GO:0004375 (16.6%) GO:0016594 (16.6%) GO:0030170 (16.6%)" glycine decarboxylation via glycine cleavage system (16.6%) "glycine cleavage complex (16.6%) cytosol (15%) mitochondrion (1.7%)" "glycine dehydrogenase (decarboxylating) activity (16.6%) glycine binding (16.6%) pyridoxal phosphate binding (16.6%)" "IPR015421 (14.4%) IPR015424 (14.4%) IPR020581 (14.4%)" "Pyridoxal phosphate-dependent transferase, major domain (14.4%) Pyridoxal phosphate-dependent transferase (14.4%) Glycine cleavage system P protein (14.4%)" FSLMATHTKEQLDYALETIHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.3.1.50 (100%) serine C-palmitoyltransferase (100%) GO:0030148 (22.2%) GO:0016020 (22.2%) "GO:0030170 (25.9%) GO:0008483 (14.8%) GO:0016740 (7.4%)" sphingolipid biosynthetic process (22.2%) membrane (22.2%) "pyridoxal phosphate binding (25.9%) transaminase activity (14.8%) transferase activity (7.4%)" "IPR001917 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class-II, pyridoxal-phosphate binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" FDDNACVLLNNAGEIR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.2%)" "GO:0003735 (24.9%) GO:0070180 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.2%)" "structural constituent of ribosome (24.9%) large ribosomal subunit rRNA binding (24.9%)" "IPR000218 (25%) IPR005745 (25%) IPR019972 (25%)" "Large ribosomal subunit protein uL14 (25%) Large ribosomal subunit protein uL14, bacteria (25%) Large ribosomal subunit protein uL14, conserved site (25%)" NVASLQGAEVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (20%) IPR011053 (20%) IPR022615 (20%)" "Na(+)-translocating NADH-quinone reductase subunit A (20%) Single hybrid motif (20%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (20%)" QALDMGLVNTVVPLADLEKETVR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 4.1.3.36 (100%) 1,4-dihydroxy-2-naphthoyl-CoA synthase (100%) GO:0009234 (33.2%) GO:0005829 (33.1%) "GO:0008935 (33.2%) GO:0016829 (0.4%) GO:0070205 (0.1%)" menaquinone biosynthetic process (33.2%) cytosol (33.1%) "1,4-dihydroxy-2-naphthoyl-CoA synthase activity (33.2%) lyase activity (0.4%) 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity (0.1%)" "IPR001753 (20.1%) IPR029045 (20.1%) IPR014748 (19.9%)" "Enoyl-CoA hydratase/isomerase (20.1%) ClpP/crotonase-like domain superfamily (20.1%) Enoyl-CoA hydratase, C-terminal (19.9%)" EIGYVNEVLGKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" GIIGLNNAVLTASAGEAIMAHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0009409 (10.2%) GO:0010467 (10.2%) GO:0000027 (9.5%)" "GO:0005829 (10.2%) GO:1990904 (10.2%)" "GO:0003924 (10.2%) GO:0005525 (10.2%) GO:0000049 (9.5%)" "response to cold (10.2%) gene expression (10.2%) ribosomal large subunit assembly (9.5%)" "cytosol (10.2%) ribonucleoprotein complex (10.2%)" "GTPase activity (10.2%) GTP binding (10.2%) tRNA binding (9.5%)" "IPR000640 (6.8%) IPR004161 (6.8%) IPR009000 (6.8%)" "Elongation factor EFG, domain V-like (6.8%) Translation elongation factor EFTu-like, domain 2 (6.8%) Translation protein, beta-barrel domain superfamily (6.8%)" AVCHDVMR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR011703 (25%) IPR027417 (25%) IPR041628 (25%)" "ATPase, AAA-3 (25%) P-loop containing nucleoside triphosphate hydrolase (25%) ChlI/MoxR, AAA lid domain (25%)" KINHSISPMDNPSQIKQQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001854 (50%) IPR036049 (50%)" "Large ribosomal subunit protein uL29 (50%) Large ribosomal subunit protein uL29 superfamily (50%)" HVPVFVTESMVGHK Actinomycetota Bacteria Bacillati Actinomycetota "GO:0000028 (16.6%) GO:0006412 (16.6%)" "GO:0005737 (16.6%) GO:0015935 (16.6%) GO:0005840 (0.1%)" "GO:0003735 (16.6%) GO:0019843 (16.6%)" "ribosomal small subunit assembly (16.6%) translation (16.6%)" "cytoplasm (16.6%) small ribosomal subunit (16.6%) ribosome (0.1%)" "structural constituent of ribosome (16.6%) rRNA binding (16.6%)" "IPR002222 (25%) IPR005732 (25%) IPR020934 (25%)" "Small ribosomal subunit protein uS19 (25%) Small ribosomal subunit protein uS19, bacteria (25%) Small ribosomal subunit protein uS19, conserved site (25%)" VNEHMLTSHPHVYAAGDITGFSLLAHTAYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (26.7%) GO:0005737 (20%) "GO:0004148 (26.7%) GO:0050660 (26.7%)" 2-oxoglutarate metabolic process (26.7%) cytoplasm (20%) "dihydrolipoyl dehydrogenase (NADH) activity (26.7%) flavin adenine dinucleotide binding (26.7%)" "IPR004099 (12.9%) IPR006258 (12.9%) IPR012999 (12.9%)" "Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.9%) Dihydrolipoamide dehydrogenase (12.9%) Pyridine nucleotide-disulphide oxidoreductase, class I, active site (12.9%)" FNSSLSEDGQR root "2.3.1.12 (99.5%) 2.3.1.- (0.5%)" "dihydrolipoyllysine-residue acetyltransferase (99.5%) Transferring groups other than amino-acyl groups (0.5%)" "GO:0006086 (20.1%) GO:0006090 (0%) GO:0042867 (0%)" "GO:0005737 (20.1%) GO:0045254 (19.5%)" "GO:0031405 (20.1%) GO:0004742 (19.9%) GO:0016746 (0.2%)" "pyruvate decarboxylation to acetyl-CoA (20.1%) pyruvate metabolic process (0%) pyruvate catabolic process (0%)" "cytoplasm (20.1%) pyruvate dehydrogenase complex (19.5%)" "lipoic acid binding (20.1%) dihydrolipoyllysine-residue acetyltransferase activity (19.9%) acyltransferase activity (0.2%)" "IPR001078 (11.4%) IPR050743 (11.4%) IPR023213 (11.4%)" "2-oxoacid dehydrogenase acyltransferase, catalytic domain (11.4%) 2-oxoacid dehydrogenase family, E2 component (11.4%) Chloramphenicol acetyltransferase-like domain superfamily (11.4%)" LVPGYEAPVMLAYSAR root 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (14.8%) GO:0019740 (14.8%) GO:0006808 (0%)" "GO:0005737 (14.8%) GO:0016020 (14.8%) GO:0005829 (0%)" "GO:0004356 (14.8%) GO:0005524 (12.9%) GO:0046872 (12.8%)" "glutamine biosynthetic process (14.8%) nitrogen utilization (14.8%) regulation of nitrogen utilization (0%)" "cytoplasm (14.8%) membrane (14.8%) cytosol (0%)" "glutamine synthetase activity (14.8%) ATP binding (12.9%) metal ion binding (12.8%)" "IPR008146 (13.7%) IPR014746 (13.7%) IPR027303 (12.7%)" "Glutamine synthetase, catalytic domain (13.7%) Glutamine synthetase/guanido kinase, catalytic domain (13.7%) Glutamine synthetase, glycine-rich site (12.7%)" VLSCGNGGSHCDAMHFAEELTGR root "5.3.1.28 (99.6%) 5.3.1.- (0.3%) 5.-.-.- (0.1%)" "D-sedoheptulose-7-phosphate isomerase (99.6%) Interconverting aldoses and ketoses (0.3%) Isomerases (0.1%)" "GO:2001061 (13.7%) GO:0005975 (8.8%) GO:0009244 (5.8%)" "GO:0005737 (16.6%) GO:0005829 (0.1%) GO:0032991 (0%)" "GO:0097367 (16.8%) GO:0008968 (16.6%) GO:0008270 (16.4%)" "D-glycero-D-manno-heptose 7-phosphate biosynthetic process (13.7%) carbohydrate metabolic process (8.8%) lipopolysaccharide core region biosynthetic process (5.8%)" "cytoplasm (16.6%) cytosol (0.1%) protein-containing complex (0%)" "carbohydrate derivative binding (16.8%) D-sedoheptulose 7-phosphate isomerase activity (16.6%) zinc ion binding (16.4%)" "IPR001347 (20.1%) IPR046348 (20.1%) IPR050099 (20%)" "SIS domain (20.1%) SIS domain superfamily (20.1%) SIS family GmhA and DiaA subfamilies (20%)" IAGINIPDHKHAVIALTSIYGVGK Bacteria Bacteria "GO:0006412 (16.3%) GO:0000028 (0.2%) GO:0002181 (0.2%)" "GO:0005829 (16.1%) GO:0015935 (16.1%) GO:0005840 (1.4%)" "GO:0003735 (16.5%) GO:0019843 (16.3%) GO:0000049 (16.1%)" "translation (16.3%) ribosomal small subunit assembly (0.2%) cytoplasmic translation (0.2%)" "cytosol (16.1%) small ribosomal subunit (16.1%) ribosome (1.4%)" "structural constituent of ribosome (16.5%) rRNA binding (16.3%) tRNA binding (16.1%)" "IPR001892 (20.2%) IPR010979 (20.2%) IPR027437 (20%)" "Small ribosomal subunit protein uS13 (20.2%) Small ribosomal subunit protein uS13-like, H2TH (20.2%) Small ribosomal subunit protein uS13, C-terminal (20%)" FSVLTPVGLLPIAVAGISIRDLVAGAVSMEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" MLLSVAFTSDVIDHVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR011542 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufD (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" SFDSIDNAPEEK root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0%) GO:0070125 (0%)" "GO:0005829 (16.3%) GO:0032045 (9.3%) GO:0005737 (0.2%)" "GO:0003746 (16.6%) GO:0003924 (16.6%) GO:0005525 (16.6%)" "translational elongation (0%) mitochondrial translational elongation (0%)" "cytosol (16.3%) guanyl-nucleotide exchange factor complex (9.3%) cytoplasm (0.2%)" "translation elongation factor activity (16.6%) GTPase activity (16.6%) GTP binding (16.6%)" "IPR000795 (8.4%) IPR027417 (8.4%) IPR031157 (8.4%)" "Translational (tr)-type GTP-binding domain (8.4%) P-loop containing nucleoside triphosphate hydrolase (8.4%) Tr-type G domain, conserved site (8.4%)" AVTRGDGEKGDDVTDNVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.5.1.2 (100%) DNA ligase (NAD(+)) (100%) "GO:0006260 (16.8%) GO:0006281 (16.8%)" GO:0005829 (16.4%) "GO:0003911 (16.8%) GO:0046872 (16.8%) GO:0003677 (16.1%)" "DNA replication (16.8%) DNA repair (16.8%)" cytosol (16.4%) "DNA ligase (NAD+) activity (16.8%) metal ion binding (16.8%) DNA binding (16.1%)" "IPR013839 (8.6%) IPR013840 (8.6%) IPR004150 (8.4%)" "NAD-dependent DNA ligase, adenylation (8.6%) NAD-dependent DNA ligase, N-terminal (8.6%) NAD-dependent DNA ligase, OB-fold (8.4%)" VKDAMMVCPVIVCCFEGVDAVQVVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.4.6 (100%) nucleoside-diphosphate kinase (100%) "GO:0006183 (16.7%) GO:0006228 (16.7%) GO:0006241 (16.7%)" "GO:0004550 (16.7%) GO:0005524 (16.7%) GO:0046872 (16.7%)" "GTP biosynthetic process (16.7%) UTP biosynthetic process (16.7%) CTP biosynthetic process (16.7%)" "nucleoside diphosphate kinase activity (16.7%) ATP binding (16.7%) metal ion binding (16.7%)" "IPR001564 (25%) IPR023005 (25%) IPR034907 (25%)" "Nucleoside diphosphate kinase (25%) Nucleoside diphosphate kinase, active site (25%) Nucleoside diphosphate kinase-like domain (25%)" SKLNPALEIEGFLLTMYDSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.-.- (100%) Acting on acid anhydrides (100%) GO:0016787 (100%) hydrolase activity (100%) "IPR025669 (33.3%) IPR027417 (33.3%) IPR050678 (33.3%)" "AAA domain (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%) DNA Partitioning ATPase (33.3%)" EGVSKDDAEALKK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006412 (24.7%) GO:0002181 (0%) GO:0006351 (0%)" "GO:0022625 (24.6%) GO:0005840 (0.5%) GO:0005737 (0.1%)" "GO:0003735 (24.7%) GO:0003729 (24.7%) GO:0003677 (0%)" "translation (24.7%) cytoplasmic translation (0%) DNA-templated transcription (0%)" "cytosolic large ribosomal subunit (24.6%) ribosome (0.5%) cytoplasm (0.1%)" "structural constituent of ribosome (24.7%) mRNA binding (24.7%) DNA binding (0%)" "IPR000206 (19.9%) IPR013823 (19.9%) IPR014719 (19.9%)" "Large ribosomal subunit protein bL12 (19.9%) Large ribosomal subunit protein bL12, C-terminal (19.9%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (19.9%)" EMASNGLIPGVKK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (20.3%) "GO:0005737 (20.1%) GO:0015935 (20.1%) GO:0005840 (0.4%)" "GO:0003735 (20.3%) GO:0019843 (18.6%)" translation (20.3%) "cytoplasm (20.1%) small ribosomal subunit (20.1%) ribosome (0.4%)" "structural constituent of ribosome (20.3%) rRNA binding (18.6%)" "IPR001209 (30.2%) IPR023036 (29.8%) IPR018271 (29.1%)" "Small ribosomal subunit protein uS14 (30.2%) Small ribosomal subunit protein uS14, bacteria/plastid (29.8%) Small ribosomal subunit protein uS14, conserved site (29.1%)" IANSWPDSMDDSCAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.1.3.- (100%) Acting on carbohydrates and derivatives (100%) GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" VHPVDANSPEEIKEYIYHSWYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.12.99.6 (100%) hydrogenase (acceptor) (100%) GO:0030313 (32.4%) "GO:0008901 (32.4%) GO:0016151 (32.4%) GO:0033748 (2.7%)" cell envelope (32.4%) "ferredoxin hydrogenase activity (32.4%) nickel cation binding (32.4%) hydrogenase (acceptor) activity (2.7%)" "IPR001501 (25%) IPR018194 (25%) IPR029014 (25%)" "Nickel-dependent hydrogenase, large subunit (25%) Nickel-dependent hydrogenase, large subunit, nickel binding site (25%) [NiFe]-hydrogenase, large subunit (25%)" IQEGINALSGYAEIFQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.-.-.- (100%) Ligases (100%) GO:0015977 (21.3%) GO:0009317 (21.3%) "GO:0003989 (21.3%) GO:0004658 (21.3%) GO:0016740 (12%)" carbon fixation (21.3%) acetyl-CoA carboxylase complex (21.3%) "acetyl-CoA carboxylase activity (21.3%) propionyl-CoA carboxylase activity (21.3%) transferase activity (12%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" TYWSPEAVKR Bacteria Bacteria "5.3.1.25 (99.7%) 5.3.1.3 (0.3%)" "L-fucose isomerase (99.7%) D-arabinose isomerase (0.3%)" "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR005763 (11.2%) IPR012889 (11.2%) IPR004216 (11.2%)" "L-fucose isomerase (11.2%) L-fucose isomerase, N-terminal-2 (11.2%) L-fucose/L-arabinose isomerase, C-terminal (11.2%)" AILICNPNNPTGYLYTRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.6.1.1 (77.4%) 2.6.1.- (22.6%)" "aspartate transaminase (77.4%) Transaminases (22.6%)" GO:0006520 (33.2%) "GO:0030170 (33.2%) GO:0008483 (28.1%) GO:0004069 (5.4%)" amino acid metabolic process (33.2%) "pyridoxal phosphate binding (33.2%) transaminase activity (28.1%) L-aspartate:2-oxoglutarate aminotransferase activity (5.4%)" "IPR004839 (20.1%) IPR050596 (20.1%) IPR015421 (19.9%)" "Aminotransferase, class I/classII, large domain (20.1%) Aspartate/prephenate aminotransferase-like (20.1%) Pyridoxal phosphate-dependent transferase, major domain (19.9%)" KVSGNSPVIFDVTHALQCR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.5.1.55 (100%) 3-deoxy-8-phosphooctulonate synthase (100%) "GO:0019294 (30.9%) GO:0009103 (2.2%) GO:0046394 (0.4%)" "GO:0005737 (32.9%) GO:0005829 (0.1%) GO:0032991 (0.1%)" "GO:0008676 (33.1%) GO:0016740 (0.3%) GO:0042802 (0.1%)" "keto-3-deoxy-D-manno-octulosonic acid biosynthetic process (30.9%) lipopolysaccharide biosynthetic process (2.2%) carboxylic acid biosynthetic process (0.4%)" "cytoplasm (32.9%) cytosol (0.1%) protein-containing complex (0.1%)" "3-deoxy-8-phosphooctulonate synthase activity (33.1%) transferase activity (0.3%) identical protein binding (0.1%)" "IPR006218 (33.3%) IPR006269 (33.3%) IPR013785 (33.3%)" "DAHP synthetase I/KDSA (33.3%) 3-deoxy-8-phosphooctulonate synthase (33.3%) Aldolase-type TIM barrel (33.3%)" VLNDGYNYGANTHASTSTYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.-.- (50%) 1.2.7.11 (25%) 1.2.7.3 (25%)" "Acting on the aldehyde or oxo group of donors (50%) 2-oxoacid oxidoreductase (ferredoxin) (25%) 2-oxoglutarate synthase (25%)" GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.5%) IPR002880 (12.5%) IPR009014 (12.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" LMGALHAAGIEINRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (17%) GO:0000027 (15.2%)" "GO:0005840 (17%) GO:1990904 (17%)" "GO:0003735 (17%) GO:0019843 (17%)" "translation (17%) ribosomal large subunit assembly (15.2%)" "ribosome (17%) ribonucleoprotein complex (17%)" "structural constituent of ribosome (17%) rRNA binding (17%)" "IPR005813 (33.9%) IPR035566 (33.9%) IPR049946 (32.1%)" "Large ribosomal subunit protein bL20 (33.9%) Ribosomal protein bL20, C-terminal (33.9%) Large ribosomal subunit protein bL20, conserved site (32.1%)" TVGLWWSHLLELLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.4.13.18 (95.5%) 3.4.13.20 (4.5%)" "cytosol non-specific dipeptidase (95.5%) beta-Ala-His dipeptidase (4.5%)" GO:0006508 (25.3%) GO:0005829 (25.3%) "GO:0070573 (25.3%) GO:0046872 (24.1%)" proteolysis (25.3%) cytosol (25.3%) "metallodipeptidase activity (25.3%) metal ion binding (24.1%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" TNNASLVSSSIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" AYLVNTGWNGTGKR root 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.5%) "GO:0005829 (17.5%) GO:0005737 (0%)" "GO:0004612 (17.5%) GO:0005524 (17.5%) GO:0046872 (16.8%)" gluconeogenesis (17.5%) "cytosol (17.5%) cytoplasm (0%)" "phosphoenolpyruvate carboxykinase (ATP) activity (17.5%) ATP binding (17.5%) metal ion binding (16.8%)" "IPR001272 (25.4%) IPR013035 (25.4%) IPR015994 (24.6%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.4%) Phosphoenolpyruvate carboxykinase, C-terminal (25.4%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (24.6%)" IGIGMGYVKPEYSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (15.4%) GO:0032259 (11.5%)" "GO:0005829 (15.4%) GO:0005960 (15.4%)" "GO:0004047 (15.4%) GO:0008483 (15.4%) GO:0008168 (11.5%)" "glycine decarboxylation via glycine cleavage system (15.4%) methylation (11.5%)" "cytosol (15.4%) glycine cleavage complex (15.4%)" "aminomethyltransferase activity (15.4%) transaminase activity (15.4%) methyltransferase activity (11.5%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" MGAQTAEANINAGIAAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.95 (73%) 1.1.1.290 (16.2%) 1.1.1.81 (8.1%)" "phosphoglycerate dehydrogenase (73%) 4-phosphoerythronate dehydrogenase (16.2%) hydroxypyruvate reductase (8.1%)" "GO:0051287 (49.7%) GO:0016616 (39.4%) GO:0004617 (7.6%)" "NAD binding (49.7%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (39.4%) phosphoglycerate dehydrogenase activity (7.6%)" "IPR006140 (29.4%) IPR036291 (29.2%) IPR006139 (29%)" "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (29.4%) NAD(P)-binding domain superfamily (29.2%) D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (29%)" ISNEESISAMFEH root 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (10.8%)" "GO:0005737 (11.1%) GO:0002189 (11.1%) GO:0005829 (0%)" "GO:0000287 (11.2%) GO:0004749 (11.2%) GO:0016301 (11.2%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (10.8%)" "cytoplasm (11.1%) ribose phosphate diphosphokinase complex (11.1%) cytosol (0%)" "magnesium ion binding (11.2%) ribose phosphate diphosphokinase activity (11.2%) kinase activity (11.2%)" "IPR005946 (17%) IPR029057 (17%) IPR000836 (16.9%)" "Ribose-phosphate pyrophosphokinase (17%) Phosphoribosyltransferase-like (17%) Phosphoribosyltransferase domain (16.9%)" SGHPGAPMGMADIAEVLWR root "2.2.1.1 (99.9%) 2.2.1.- (0%) 3.1.3.- (0%)" "transketolase (99.9%) Transketolases and transaldolases (0%) Phosphoric monoester hydrolases (0%)" "GO:0009052 (22.4%) GO:0006098 (2.3%) GO:0005975 (0%)" "GO:0005829 (24.6%) GO:0016020 (1.2%)" "GO:0004802 (24.6%) GO:0046872 (24.6%) GO:0016740 (0.3%)" "pentose-phosphate shunt, non-oxidative branch (22.4%) pentose-phosphate shunt (2.3%) carbohydrate metabolic process (0%)" "cytosol (24.6%) membrane (1.2%)" "transketolase activity (24.6%) metal ion binding (24.6%) transferase activity (0.3%)" "IPR005474 (11.6%) IPR033247 (11.6%) IPR029061 (11.6%)" "Transketolase, N-terminal (11.6%) Transketolase family (11.6%) Thiamin diphosphate-binding fold (11.6%)" AYDGTLNKVNDREVVDGTVIAMNKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.8%) "GO:0022627 (24.1%) GO:0005840 (0.8%) GO:1990904 (0.8%)" "GO:0003729 (24.8%) GO:0003735 (24.8%)" translation (24.8%) "cytosolic small ribosomal subunit (24.1%) ribosome (0.8%) ribonucleoprotein complex (0.8%)" "mRNA binding (24.8%) structural constituent of ribosome (24.8%)" "IPR003029 (24.9%) IPR012340 (24.9%) IPR035104 (24.9%)" "S1 domain (24.9%) Nucleic acid-binding, OB-fold (24.9%) Ribosomal protein S1-like (24.9%)" LDMLNEELSDKER root "GO:0034605 (17.6%) GO:0042026 (14.9%) GO:0006508 (0.1%)" "GO:0005829 (14%) GO:0005737 (3.8%) GO:0016020 (0.1%)" "GO:0005524 (17.6%) GO:0016887 (17.6%) GO:0042802 (14%)" "cellular response to heat (17.6%) protein refolding (14.9%) proteolysis (0.1%)" "cytosol (14%) cytoplasm (3.8%) membrane (0.1%)" "ATP binding (17.6%) ATP hydrolysis activity (17.6%) identical protein binding (14%)" "IPR027417 (9.1%) IPR050130 (8.9%) IPR041546 (8.8%)" "P-loop containing nucleoside triphosphate hydrolase (9.1%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.9%) ClpA/ClpB, AAA lid domain (8.8%)" QAQEAVSNQATR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25.9%) IPR005706 (25.9%) IPR023591 (25.9%)" "Small ribosomal subunit protein uS2 (25.9%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.9%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.9%)" GTLYEVIYQLVGGLR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20.2%) GO:0006183 (20.2%)" "GO:0003938 (20.2%) GO:0046872 (20.2%) GO:0000166 (18.7%)" "GMP biosynthetic process (20.2%) GTP biosynthetic process (20.2%)" "IMP dehydrogenase activity (20.2%) metal ion binding (20.2%) nucleotide binding (18.7%)" "IPR001093 (16.8%) IPR005990 (16.8%) IPR013785 (16.8%)" "IMP dehydrogenase/GMP reductase (16.8%) Inosine-5'-monophosphate dehydrogenase (16.8%) Aldolase-type TIM barrel (16.8%)" GVHEGHVAAEVIAGKK root 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) "GO:0006103 (20.8%) GO:0006979 (20.5%) GO:0006090 (0%)" "GO:0005737 (16.4%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0004148 (20.8%) GO:0050660 (20.8%) GO:0016491 (0.2%)" "2-oxoglutarate metabolic process (20.8%) response to oxidative stress (20.5%) pyruvate metabolic process (0%)" "cytoplasm (16.4%) cytosol (0%) plasma membrane (0%)" "dihydrolipoyl dehydrogenase (NADH) activity (20.8%) flavin adenine dinucleotide binding (20.8%) oxidoreductase activity (0.2%)" "IPR050151 (12.7%) IPR004099 (12.7%) IPR016156 (12.7%)" "Class-I pyridine nucleotide-disulfide oxidoreductase (12.7%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.7%) FAD/NAD-linked reductase, dimerisation domain superfamily (12.7%)" KVACGAAESVPLIR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "2.1.1.185 (99.8%) 2.1.1.- (0.2%)" "23S rRNA (guanosine(2251)-2'-O)-methyltransferase (99.8%) Methyltransferases (0.2%)" "GO:0032259 (0.2%) GO:0006364 (0.1%)" GO:0005829 (33.1%) "GO:0003723 (33.2%) GO:0070039 (33.2%) GO:0008168 (0.2%)" "methylation (0.2%) rRNA processing (0.1%)" cytosol (33.1%) "RNA binding (33.2%) rRNA (guanosine-2'-O-)-methyltransferase activity (33.2%) methyltransferase activity (0.2%)" "IPR001537 (14.4%) IPR004441 (14.4%) IPR029026 (14.4%)" "tRNA/rRNA methyltransferase, SpoU type (14.4%) RNA methyltransferase TrmH (14.4%) tRNA (guanine-N1-)-methyltransferase, N-terminal (14.4%)" GIASMHCSANTDMEGTSSAIFFGLSGTGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.1%) GO:0005829 (17.1%) "GO:0004612 (17.1%) GO:0005524 (17.1%) GO:0046872 (17.1%)" gluconeogenesis (17.1%) cytosol (17.1%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.1%) ATP binding (17.1%) metal ion binding (17.1%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" VGLSAHANKFPAQLSGGQQQR root "7.4.2.1 (33.3%) 3.6.1.15 (16.7%) 3.6.1.3 (16.7%)" "ABC-type polar-amino-acid transporter (33.3%) nucleoside-triphosphate phosphatase (16.7%) Deleted entry (16.7%)" "GO:0006152 (0.1%) GO:0006206 (0.1%) GO:0006865 (0.1%)" "GO:0005886 (24.7%) GO:0016020 (0.1%) GO:0005829 (0.1%)" "GO:0005524 (25.4%) GO:0016887 (24.9%) GO:0015424 (23.7%)" "purine nucleoside catabolic process (0.1%) pyrimidine nucleobase metabolic process (0.1%) amino acid transport (0.1%)" "plasma membrane (24.7%) membrane (0.1%) cytosol (0.1%)" "ATP binding (25.4%) ATP hydrolysis activity (24.9%) ABC-type amino acid transporter activity (23.7%)" "IPR027417 (16.8%) IPR003439 (16.8%) IPR050086 (16.7%)" "P-loop containing nucleoside triphosphate hydrolase (16.8%) ABC transporter-like, ATP-binding domain (16.8%) Methionine import ATP-binding protein MetN-like (16.7%)" RMNAEAGACEDKKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (50%) GO:0016491 (19%) GO:0016692 (16.7%)" "iron ion binding (50%) oxidoreductase activity (19%) NADH peroxidase activity (16.7%)" "IPR003251 (12.5%) IPR009040 (12.5%) IPR009078 (12.5%)" "Rubrerythrin, diiron-binding domain (12.5%) Ferritin-like diiron domain (12.5%) Ferritin-like superfamily (12.5%)" IGKLPISIPTGVTVTLKDNVVTVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0002181 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" cytoplasmic translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000702 (20%) IPR002358 (20%) IPR019906 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, conserved site (20%) Large ribosomal subunit protein uL6, bacteria (20%)" IGKLEFPDALLKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.3%) GO:0043335 (16.3%) GO:0051083 (16.3%)" "GO:0003755 (16.3%) GO:0043022 (16.3%) GO:0044183 (16.3%)" "protein transport (16.3%) protein unfolding (16.3%) 'de novo' cotranslational protein folding (16.3%)" "peptidyl-prolyl cis-trans isomerase activity (16.3%) ribosome binding (16.3%) protein folding chaperone (16.3%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" PEMGHFKK Bacteria Bacteria GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (26.2%) IPR009000 (26.2%) IPR019927 (26.2%)" "Large ribosomal subunit protein uL3 (26.2%) Translation protein, beta-barrel domain superfamily (26.2%) Large ribosomal subunit protein uL3, bacteria/organella (26.2%)" ATSSMTYDHHAQVSSSIAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (20.8%) GO:0005737 (18.5%) "GO:0003746 (20.8%) GO:0005525 (20.8%) GO:0003924 (19.2%)" ribosome disassembly (20.8%) cytoplasm (18.5%) "translation elongation factor activity (20.8%) GTP binding (20.8%) GTPase activity (19.2%)" "IPR000640 (6.5%) IPR005517 (6.5%) IPR014721 (6.5%)" "Elongation factor EFG, domain V-like (6.5%) Translation elongation factor EFG/EF2, domain IV (6.5%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.5%)" ISQEELDSIPGTGYEGR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0005737 (33.3%) "GO:0016407 (33.3%) GO:0031405 (33.3%)" cytoplasm (33.3%) "acetyltransferase activity (33.3%) lipoic acid binding (33.3%)" "IPR000089 (12.5%) IPR001078 (12.5%) IPR003016 (12.5%)" "Biotin/lipoyl attachment (12.5%) 2-oxoacid dehydrogenase acyltransferase, catalytic domain (12.5%) 2-oxo acid dehydrogenase, lipoyl-binding site (12.5%)" FKFNLPSELIALHPAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.99.17 (100%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (100%) "GO:0002099 (30.8%) GO:0008616 (7.7%)" GO:0005737 (30.8%) GO:0051075 (30.8%) "tRNA wobble guanine modification (30.8%) tRNA queuosine(34) biosynthetic process (7.7%)" cytoplasm (30.8%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity (30.8%) "IPR003699 (25%) IPR036100 (25%) IPR042118 (25%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA (25%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily (25%) QueA, domain 1 (25%)" NNASANMNLGLIALTKGDQAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (52%) IPR019734 (48%)" "Tetratricopeptide-like helical domain superfamily (52%) Tetratricopeptide repeat (48%)" KLTDSEVFGFAQINSEHCR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (18.6%) GO:0006164 (1.6%)" GO:0005737 (20.1%) "GO:0004642 (20.1%) GO:0005524 (19.9%) GO:0046872 (19.2%)" "'de novo' IMP biosynthetic process (18.6%) purine nucleotide biosynthetic process (1.6%)" cytoplasm (20.1%) "phosphoribosylformylglycinamidine synthase activity (20.1%) ATP binding (19.9%) metal ion binding (19.2%)" "IPR041609 (11.5%) IPR036604 (11.4%) IPR036921 (11.4%)" "Phosphoribosylformylglycinamidine synthase, linker domain (11.5%) Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily (11.4%) PurM-like, N-terminal domain superfamily (11.4%)" IGNIFTGGQAYSSAEVR SIEESIAALTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (19.4%) GO:0005829 (19.4%) "GO:0002161 (20.4%) GO:0004832 (20.4%) GO:0005524 (20.4%)" valyl-tRNA aminoacylation (19.4%) cytosol (19.4%) "aminoacyl-tRNA deacylase activity (20.4%) valine-tRNA ligase activity (20.4%) ATP binding (20.4%)" "IPR001412 (9.1%) IPR002300 (9.1%) IPR002303 (9.1%)" "Aminoacyl-tRNA synthetase, class I, conserved site (9.1%) Aminoacyl-tRNA synthetase, class Ia (9.1%) Valine-tRNA ligase (9.1%)" ITDIMFEGTDEDLRQTK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0006633 (13.7%) GO:0005829 (13.7%) GO:0004314 (72.6%) fatty acid biosynthetic process (13.7%) cytosol (13.7%) [acyl-carrier-protein] S-malonyltransferase activity (72.6%) "IPR001227 (14.3%) IPR004410 (14.3%) IPR014043 (14.3%)" "Acyl transferase domain superfamily (14.3%) Malonyl CoA-acyl carrier protein transacylase, FabD-type (14.3%) Acyl transferase domain (14.3%)" IVNEPTAASLAYGLDKTNKDMK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005737 (23.2%) GO:0070013 (2.7%)" "GO:0005524 (25%) GO:0140662 (25%) GO:0051082 (24.1%)" "cytoplasm (23.2%) intracellular organelle lumen (2.7%)" "ATP binding (25%) ATP-dependent protein folding chaperone (25%) unfolded protein binding (24.1%)" "IPR013126 (17%) IPR018181 (17%) IPR043129 (17%)" "Heat shock protein 70 family (17%) Heat shock protein 70, conserved site (17%) ATPase, nucleotide binding domain (17%)" LLGFGSFSVSEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" ALNLDAIHDTVHEMCKDEAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.11.1.1 (95.5%) 1.14.13.81 (4.5%)" "NADH peroxidase (95.5%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (4.5%)" "GO:0005506 (50%) GO:0016491 (19.6%) GO:0016692 (17.9%)" "iron ion binding (50%) oxidoreductase activity (19.6%) NADH peroxidase activity (17.9%)" "IPR052773 (13%) IPR003251 (12.8%) IPR009040 (12.8%)" "Anaerobic Bacterial Peroxidase-Related (13%) Rubrerythrin, diiron-binding domain (12.8%) Ferritin-like diiron domain (12.8%)" VQGTVGEIKPLGAGLINDTYKVNTTEADAPDYVLQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.162 (100%) N-acetylhexosamine 1-kinase (100%) "GO:0016740 (88.9%) GO:0016301 (11.1%)" "transferase activity (88.9%) kinase activity (11.1%)" "IPR002575 (33.3%) IPR011009 (33.3%) IPR050249 (33.3%)" "Aminoglycoside phosphotransferase (33.3%) Protein kinase-like domain superfamily (33.3%) Pseudomonas-type Homoserine Kinase (33.3%)" SVIDQAGGPDKIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.2 (100%) glucokinase (100%) "GO:0004340 (60%) GO:0016301 (40%)" "glucokinase activity (60%) kinase activity (40%)" "IPR000600 (33.3%) IPR043129 (33.3%) IPR049874 (33.3%)" "ROK family (33.3%) ATPase, nucleotide binding domain (33.3%) ROK, conserved site (33.3%)" KYSADQAAENGGELGWFTEVTALR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000297 (25%) IPR027304 (25%) IPR046357 (25%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (25%) Trigger factor/SurA domain superfamily (25%) Peptidyl-prolyl cis-trans isomerase domain superfamily (25%)" FHSSVNLGILK root GO:0006537 (25.7%) GO:0005829 (25.7%) "GO:0004354 (25.7%) GO:0000166 (22.8%)" glutamate biosynthetic process (25.7%) cytosol (25.7%) "glutamate dehydrogenase (NADP+) activity (25.7%) nucleotide binding (22.8%)" "IPR006097 (11.3%) IPR033524 (11.3%) IPR046346 (11.3%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.3%) Leu/Phe/Val dehydrogenases active site (11.3%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.3%)" ILEAQPEAREDLKPHAPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (8.3%) IPR003029 (8.3%) IPR004087 (8.3%)" "Exoribonuclease, phosphorolytic domain 1 (8.3%) S1 domain (8.3%) K Homology domain (8.3%)" GSEADAYALTCPLITK RNDQIGSVCK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.6.2.2 (99.2%) 5.99.1.3 (0.8%)" "DNA topoisomerase (ATP-hydrolyzing) (99.2%) Transferred entry: 5.6.2.2 (0.8%)" "GO:0006265 (12.7%) GO:0006261 (11.4%)" "GO:0005737 (12.7%) GO:0009330 (12.7%) GO:0005694 (12.1%)" "GO:0003677 (12.7%) GO:0005524 (12.7%) GO:0034335 (11.6%)" "DNA topological change (12.7%) DNA-templated DNA replication (11.4%)" "cytoplasm (12.7%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.7%) chromosome (12.1%)" "DNA binding (12.7%) ATP binding (12.7%) DNA negative supercoiling activity (11.6%)" "IPR006691 (12.7%) IPR050220 (12.7%) IPR035516 (12.6%)" "DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.7%) Type II DNA Topoisomerases (12.7%) DNA gyrase/topoisomerase IV, subunit A, C-terminal (12.6%)" MVNYKDLGLVNTKEMFAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.7%) GO:0030388 (24.7%)" GO:0016020 (1%) "GO:0004332 (24.7%) GO:0008270 (24.7%)" "glycolytic process (24.7%) fructose 1,6-bisphosphate metabolic process (24.7%)" membrane (1%) "fructose-bisphosphate aldolase activity (24.7%) zinc ion binding (24.7%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" GGDGNYGYNAATEEYGNMIDMGILDPTK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (16.9%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (16.2%) GO:1990220 (0.1%) GO:0005829 (0%)" "GO:0140662 (16.9%) GO:0005524 (16.9%) GO:0016853 (16.7%)" "protein refolding (16.9%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (16.2%) GroEL-GroES complex (0.1%) cytosol (0%)" "ATP-dependent protein folding chaperone (16.9%) ATP binding (16.9%) isomerase activity (16.7%)" "IPR001844 (16.8%) IPR027413 (16.8%) IPR002423 (16.8%)" "Chaperonin Cpn60/GroEL (16.8%) GroEL-like equatorial domain superfamily (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%)" LVDLNCFTVESAMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (14.5%) IPR020783 (14.5%) IPR020785 (14.5%)" "Ribosomal protein uL11 (14.5%) Large ribosomal subunit protein uL11, C-terminal (14.5%) Large ribosomal subunit protein uL11, conserved site (14.5%)" QADKYNVPR root "GO:0032790 (19.9%) GO:0006412 (0.3%) GO:0070125 (0.3%)" "GO:0005737 (18.2%) GO:0005739 (0.3%) GO:0009507 (0.2%)" "GO:0003924 (20%) GO:0005525 (20%) GO:0003746 (19.7%)" "ribosome disassembly (19.9%) translation (0.3%) mitochondrial translational elongation (0.3%)" "cytoplasm (18.2%) mitochondrion (0.3%) chloroplast (0.2%)" "GTPase activity (20%) GTP binding (20%) translation elongation factor activity (19.7%)" "IPR000795 (6.4%) IPR027417 (6.4%) IPR005225 (6.4%)" "Translational (tr)-type GTP-binding domain (6.4%) P-loop containing nucleoside triphosphate hydrolase (6.4%) Small GTP-binding domain (6.4%)" DNFAAEYQLASPQDHPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis LAVLPTIAPYLLPR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006355 (0.5%) GO:0005829 (33.7%) "GO:0003700 (33.2%) GO:0003677 (32.7%)" regulation of DNA-templated transcription (0.5%) cytosol (33.7%) "DNA-binding transcription factor activity (33.2%) DNA binding (32.7%)" "IPR005119 (20.2%) IPR050950 (20.2%) IPR000847 (19.9%)" "LysR, substrate-binding (20.2%) HTH-type LysR transcriptional regulators (20.2%) LysR, HTH, N-terminal domain (19.9%)" TLHFDPVKLEFINDEAANR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (50%) GO:0016491 (34.2%) GO:0050112 (15.8%)" "nucleotide binding (50%) oxidoreductase activity (34.2%) inositol 2-dehydrogenase (NAD+) activity (15.8%)" "IPR000683 (21.8%) IPR036291 (21.8%) IPR043906 (21.8%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (21.8%) NAD(P)-binding domain superfamily (21.8%) Gfo/Idh/MocA-like oxidoreductase, bacterial type, C-terminal (21.8%)" DEEIARLQGDLNVIAESINK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 6.3.5.- (100%) Carbon--nitrogen ligases with glutamine as amido-N-donor (100%) "GO:0006412 (18.2%) GO:0006450 (18.2%) GO:0070681 (18.2%)" "GO:0005524 (18.2%) GO:0050567 (18.2%) GO:0016740 (9.1%)" "translation (18.2%) regulation of translational fidelity (18.2%) glutaminyl-tRNAGln biosynthesis via transamidation (18.2%)" "ATP binding (18.2%) glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity (18.2%) transferase activity (9.1%)" "IPR003837 (50%) IPR036113 (50%)" "Glu-tRNAGln amidotransferase C subunit (50%) Glu-tRNAGln amidotransferase superfamily, subunit C (50%)" LWEIVKDTLRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0034599 (33.3%) GO:0005737 (33.3%) GO:0016491 (33.3%) cellular response to oxidative stress (33.3%) cytoplasm (33.3%) oxidoreductase activity (33.3%) "IPR000415 (33.3%) IPR029479 (33.3%) IPR033877 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase Frm2/Hbn1-like (33.3%)" IRLTAEMDPANLK Pseudomonadati Bacteria Pseudomonadati "1.2.1.- (95.8%) 1.2.1.12 (4.2%)" "With NAD(+) or NADP(+) as acceptor (95.8%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (4.2%)" "GO:0006006 (16.8%) GO:0006096 (16.1%)" GO:0005737 (16.1%) "GO:0051287 (17.2%) GO:0050661 (16.8%) GO:0004365 (9.1%)" "glucose metabolic process (16.8%) glycolytic process (16.1%)" cytoplasm (16.1%) "NAD binding (17.2%) NADP binding (16.8%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (9.1%)" "IPR020828 (16.8%) IPR020831 (16.8%) IPR036291 (16.8%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.8%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (16.8%) NAD(P)-binding domain superfamily (16.8%)" VKESQDQELLDFVARR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.3.8.1 (100%) short-chain acyl-CoA dehydrogenase (100%) "GO:0050660 (50%) GO:0003995 (40%) GO:0016937 (10%)" "flavin adenine dinucleotide binding (50%) acyl-CoA dehydrogenase activity (40%) short-chain fatty acyl-CoA dehydrogenase activity (10%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009075 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.1%)" NITDVGHLEHDADDGEDKIAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.16 (100%) cysteine--tRNA ligase (100%) GO:0006423 (20%) GO:0005829 (20%) "GO:0004817 (20%) GO:0005524 (20%) GO:0008270 (19.8%)" cysteinyl-tRNA aminoacylation (20%) cytosol (20%) "cysteine-tRNA ligase activity (20%) ATP binding (20%) zinc ion binding (19.8%)" "IPR009080 (14.3%) IPR014729 (14.3%) IPR015273 (14.3%)" "Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (14.3%) Rossmann-like alpha/beta/alpha sandwich fold (14.3%) Cysteinyl-tRNA synthetase, class Ia, DALR (14.3%)" SKDVTLAAIYALGEGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "IPR011989 (50%) IPR016024 (50%)" "Armadillo-like helical (50%) Armadillo-type fold (50%)" FQQTLILPDDVDKDKIDAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" GVTGIMVQPMLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (50%) GO:0003824 (25%) GO:0016874 (20%)" "ATP binding (50%) catalytic activity (25%) ligase activity (20%)" "IPR013815 (21.3%) IPR003781 (19.1%) IPR016102 (19.1%)" "ATP-grasp fold, subdomain 1 (21.3%) CoA-binding (19.1%) Succinyl-CoA synthetase-like (19.1%)" RAGDAGIFFIDSQLGQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.16.3.2 (93.8%) 1.16.3.1 (6.3%)" "bacterial non-heme ferritin (93.8%) ferroxidase (6.3%)" "GO:0006826 (14.6%) GO:0006879 (14.6%)" GO:0005829 (14.6%) "GO:0004322 (14.6%) GO:0008198 (14.6%) GO:0008199 (14.6%)" "iron ion transport (14.6%) intracellular iron ion homeostasis (14.6%)" cytosol (14.6%) "ferroxidase activity (14.6%) ferrous iron binding (14.6%) ferric iron binding (14.6%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" ALVDAGVDAIVIDTAHGHSK Bacteria Bacteria 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.8%) IPR001093 (16.8%) IPR005990 (16.8%)" "CBS domain (16.8%) IMP dehydrogenase/GMP reductase (16.8%) Inosine-5'-monophosphate dehydrogenase (16.8%)" YADLYTVMTDAISHYVSDVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.1.2.11 (100%) 3-methyl-2-oxobutanoate hydroxymethyltransferase (100%) "GO:0015940 (18.6%) GO:0032259 (12.8%)" GO:0005737 (18.6%) "GO:0000287 (18.6%) GO:0003864 (18.6%) GO:0008168 (12.8%)" "pantothenate biosynthetic process (18.6%) methylation (12.8%)" cytoplasm (18.6%) "magnesium ion binding (18.6%) 3-methyl-2-oxobutanoate hydroxymethyltransferase activity (18.6%) methyltransferase activity (12.8%)" "IPR003700 (33.3%) IPR015813 (33.3%) IPR040442 (33.3%)" "Ketopantoate hydroxymethyltransferase (33.3%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (33.3%) Pyruvate kinase-like domain superfamily (33.3%)" VIPELDGKLTGMSMR root "1.2.1.- (66.7%) 1.2.1.12 (33.3%)" "With NAD(+) or NADP(+) as acceptor (66.7%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (33.3%)" "GO:0006006 (21.4%) GO:0006096 (7.1%)" GO:0005829 (7.1%) "GO:0050661 (21.4%) GO:0051287 (21.4%) GO:0004365 (14.3%)" "glucose metabolic process (21.4%) glycolytic process (7.1%)" cytosol (7.1%) "NADP binding (21.4%) NAD binding (21.4%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (14.3%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" TLMHGVIDSPDIPLNVSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005524 (25%) GO:0016887 (25%) GO:0051082 (25%)" "ATP binding (25%) ATP hydrolysis activity (25%) unfolded protein binding (25%)" "IPR001404 (15%) IPR019805 (15%) IPR020568 (15%)" "Heat shock protein Hsp90 family (15%) Heat shock protein Hsp90, conserved site (15%) Ribosomal protein uS5 domain 2-type superfamily (15%)" SGSICLAYETVENPDHTLPLLIPMSEVAGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.1.1 (100%) alanine dehydrogenase (100%) GO:0042853 (25%) GO:0005886 (25%) "GO:0000166 (25%) GO:0000286 (25%)" L-alanine catabolic process (25%) plasma membrane (25%) "nucleotide binding (25%) alanine dehydrogenase activity (25%)" "IPR007698 (16.7%) IPR007886 (16.7%) IPR008141 (16.7%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (16.7%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (16.7%) Alanine dehydrogenase (16.7%)" EIKDISGLTHGIGWCAPQQGACK Bacteria Bacteria GO:0016226 (33.3%) "GO:0005506 (33.3%) GO:0051536 (33.3%)" iron-sulfur cluster assembly (33.3%) "iron ion binding (33.3%) iron-sulfur cluster binding (33.3%)" IPR002871 (100%) NIF system FeS cluster assembly, NifU, N-terminal (100%) TYPDAGSIASDLEEITCATFNPDLLGR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR003741 (33.3%) IPR024185 (33.3%) IPR037171 (33.3%)" "LUD domain (33.3%) 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily (33.3%) NagB/RpiA transferase-like (33.3%)" TSVFVAPDAEMIEYAAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.6.99.2 (100%) pyridoxine 5'-phosphate synthase (100%) GO:0008615 (33.3%) GO:0005829 (33.3%) GO:0033856 (33.3%) pyridoxine biosynthetic process (33.3%) cytosol (33.3%) pyridoxine 5'-phosphate synthase activity (33.3%) "IPR004569 (33.3%) IPR013785 (33.3%) IPR036130 (33.3%)" "Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ (33.3%) Aldolase-type TIM barrel (33.3%) Pyridoxine 5'-phosphate synthase (33.3%)" KLVQGGGVSLNKEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) "GO:0006437 (16.4%) GO:0043039 (0.4%) GO:0006418 (0.1%)" GO:0005829 (16.7%) "GO:0003723 (16.9%) GO:0004831 (16.7%) GO:0005524 (16.5%)" "tyrosyl-tRNA aminoacylation (16.4%) tRNA aminoacylation (0.4%) tRNA aminoacylation for protein translation (0.1%)" cytosol (16.7%) "RNA binding (16.9%) tyrosine-tRNA ligase activity (16.7%) ATP binding (16.5%)" "IPR036986 (12.7%) IPR054608 (12.7%) IPR024088 (12.7%)" "RNA-binding S4 domain superfamily (12.7%) Tyrosine--tRNA ligase SYY-like, C-terminal domain (12.7%) Tyrosine-tRNA ligase, bacterial-type (12.7%)" IVEVCAQQGAVVNKGDVIAYLER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.3.1 (66.7%) 6.4.1.1 (33.3%)" "methylmalonyl-CoA carboxytransferase (66.7%) pyruvate carboxylase (33.3%)" GO:0006094 (31%) GO:0005737 (31%) "GO:0004736 (31%) GO:0003824 (3.4%) GO:0047154 (3.4%)" gluconeogenesis (31%) cytoplasm (31%) "pyruvate carboxylase activity (31%) catalytic activity (3.4%) methylmalonyl-CoA carboxytransferase activity (3.4%)" "IPR000891 (25%) IPR003379 (25%) IPR013785 (25%)" "Pyruvate carboxyltransferase (25%) Carboxylase, conserved domain (25%) Aldolase-type TIM barrel (25%)" ATRTESDLIGEREVPETALYGVQTLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.7%) GO:0006531 (24.7%)" GO:0005829 (24.7%) "GO:0008797 (24.7%) GO:0016853 (1.3%)" "tricarboxylic acid cycle (24.7%) aspartate metabolic process (24.7%)" cytosol (24.7%) "aspartate ammonia-lyase activity (24.7%) isomerase activity (1.3%)" "IPR000362 (12.6%) IPR008948 (12.6%) IPR018951 (12.6%)" "Fumarate lyase family (12.6%) L-Aspartase-like (12.6%) Fumarase C, C-terminal (12.6%)" YSWAPEGGAPIIEEIPAEEKDK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.1%) IPR000795 (7.1%) IPR005225 (7.1%)" "Elongation factor EFG, domain V-like (7.1%) Translational (tr)-type GTP-binding domain (7.1%) Small GTP-binding domain (7.1%)" YQEIANFTNGKDYTTCDIAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006879 (20%) GO:0005829 (20%) "GO:0004322 (20%) GO:0008199 (20%) GO:0020037 (20%)" intracellular iron ion homeostasis (20%) cytosol (20%) "ferroxidase activity (20%) ferric iron binding (20%) heme binding (20%)" "IPR008331 (17.3%) IPR009078 (17.3%) IPR012347 (17.3%)" "Ferritin/DPS domain (17.3%) Ferritin-like superfamily (17.3%) Ferritin-like (17.3%)" DAYIAEFIAPIKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.6.5 (100%) GTP diphosphokinase (100%) GO:0015969 (37.2%) GO:0005886 (37.2%) "GO:0016301 (9.3%) GO:0016787 (9.3%) GO:0008728 (7%)" guanosine tetraphosphate metabolic process (37.2%) plasma membrane (37.2%) "kinase activity (9.3%) hydrolase activity (9.3%) GTP diphosphokinase activity (7%)" "IPR002912 (11%) IPR004095 (11%) IPR007685 (11%)" "ACT domain (11%) TGS (11%) RelA/SpoT (11%)" VAVTPLEEWIEYLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0071973 (33.3%) GO:0009288 (33.3%) GO:0003774 (33.3%) bacterial-type flagellum-dependent cell motility (33.3%) bacterial-type flagellum (33.3%) cytoskeletal motor activity (33.3%) "IPR010106 (85.1%) IPR000563 (13.9%) IPR019191 (1%)" "Recombination-promoting nuclease RpnA (85.1%) Flagellar assembly protein FliH (13.9%) Essential protein Yae1, N-terminal (1%)" SWDRVNEALEKDEIIKGYIK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (24.1%) "GO:0022627 (23.1%) GO:1990904 (1.5%) GO:0005737 (1%)" "GO:0003729 (24.6%) GO:0003735 (24.6%)" translation (24.1%) "cytosolic small ribosomal subunit (23.1%) ribonucleoprotein complex (1.5%) cytoplasm (1%)" "mRNA binding (24.6%) structural constituent of ribosome (24.6%)" "IPR003029 (23.5%) IPR012340 (23.5%) IPR035104 (23.5%)" "S1 domain (23.5%) Nucleic acid-binding, OB-fold (23.5%) Ribosomal protein S1-like (23.5%)" YGITGVTEILHNPSYDVLFAEETKPGLEGFEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.2%) GO:0005829 (17.2%) "GO:0004612 (17.2%) GO:0005524 (17.2%) GO:0046872 (17.2%)" gluconeogenesis (17.2%) cytosol (17.2%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.2%) ATP binding (17.2%) metal ion binding (17.2%)" "IPR001272 (25.5%) IPR008210 (25.5%) IPR013035 (24.5%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.5%) Phosphoenolpyruvate carboxykinase, N-terminal (25.5%) Phosphoenolpyruvate carboxykinase, C-terminal (24.5%)" KKGNDAGNYETSAPHMQNFIDCVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (72.7%) GO:0050112 (27.3%)" "nucleotide binding (72.7%) inositol 2-dehydrogenase (NAD+) activity (27.3%)" "IPR000683 (25%) IPR006311 (25%) IPR036291 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Twin-arginine translocation pathway, signal sequence (25%) NAD(P)-binding domain superfamily (25%)" VGDEIEAVILTLDRDERK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (23.9%) "GO:0022627 (22%) GO:0005737 (1.8%) GO:0005840 (1.8%)" "GO:0003729 (23.9%) GO:0003735 (23.9%) GO:0004654 (0.9%)" translation (23.9%) "cytosolic small ribosomal subunit (22%) cytoplasm (1.8%) ribosome (1.8%)" "mRNA binding (23.9%) structural constituent of ribosome (23.9%) polyribonucleotide nucleotidyltransferase activity (0.9%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" NCFITPHIAWATSAAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.29 (100%) glycerate dehydrogenase (100%) "GO:0051287 (50%) GO:0016616 (37.5%) GO:0008465 (9.4%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (37.5%) hydroxypyruvate reductase (NADH) activity (9.4%)" "IPR006139 (20%) IPR006140 (20%) IPR029753 (20%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (20%)" GLDPEISGEGIDNNIYPRPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.5%) IPR008969 (12.5%) IPR012910 (12.5%)" "TonB-dependent receptor-like, beta-barrel (12.5%) Carboxypeptidase-like, regulatory domain superfamily (12.5%) TonB-dependent receptor, plug domain (12.5%)" FNIDARDELKKGVDELANAVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17%) GO:0005737 (16%) "GO:0005524 (17%) GO:0016853 (17%) GO:0140662 (17%)" protein refolding (17%) cytoplasm (16%) "ATP binding (17%) isomerase activity (17%) ATP-dependent protein folding chaperone (17%)" "IPR001844 (17.3%) IPR002423 (17.3%) IPR018370 (16.3%)" "Chaperonin Cpn60/GroEL (17.3%) Chaperonin Cpn60/GroEL/TCP-1 family (17.3%) Chaperonin Cpn60, conserved site (16.3%)" LTIVPAQTSAEDVLK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006526 (15.4%) GO:0006207 (15%) GO:0006541 (15%)" "GO:0005951 (0.6%) GO:0005737 (0.1%) GO:0005829 (0.1%)" "GO:0004088 (16.1%) GO:0005524 (15%) GO:0004359 (6.2%)" "L-arginine biosynthetic process (15.4%) 'de novo' pyrimidine nucleobase biosynthetic process (15%) glutamine metabolic process (15%)" "carbamoyl-phosphate synthase complex (0.6%) cytoplasm (0.1%) cytosol (0.1%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (16.1%) ATP binding (15%) glutaminase activity (6.2%)" "IPR029062 (14.9%) IPR017926 (14.8%) IPR050472 (14.4%)" "Class I glutamine amidotransferase-like (14.9%) Glutamine amidotransferase (14.8%) Anthranilate Synthase/Amidotransferase (14.4%)" EAHNANIMFLIQQANIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR011990 (51.1%) IPR019734 (48.9%)" "Tetratricopeptide-like helical domain superfamily (51.1%) Tetratricopeptide repeat (48.9%)" VEKITLNMGVGEAIADKK root "GO:0006412 (16.6%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (16.9%) GO:1990904 (16.5%) GO:0005829 (0.1%)" "GO:0003735 (16.6%) GO:0000049 (16.5%) GO:0019843 (16.5%)" "translation (16.6%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (16.9%) ribonucleoprotein complex (16.5%) cytosol (0.1%)" "structural constituent of ribosome (16.6%) tRNA binding (16.5%) rRNA binding (16.5%)" "IPR022803 (16.9%) IPR031310 (16.9%) IPR002132 (16.8%)" "Large ribosomal subunit protein uL5 domain superfamily (16.9%) Large ribosomal subunit protein uL5, N-terminal (16.9%) Large ribosomal subunit protein uL5 (16.8%)" AIFGDKAGDVKDASLK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (20%) GO:0006508 (0.1%)" GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (19.9%)" "DNA-templated transcription (20%) proteolysis (0.1%)" DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (19.9%)" "IPR007120 (8.3%) IPR015712 (8.3%) IPR014724 (8.3%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (8.3%) DNA-directed RNA polymerase, subunit 2 (8.3%) RNA polymerase Rpb2, OB-fold (8.3%)" NLGSIADLTR root GO:0006412 (33.3%) "GO:0022627 (33.3%) GO:0005840 (0.2%)" GO:0003735 (33.3%) translation (33.3%) "cytosolic small ribosomal subunit (33.3%) ribosome (0.2%)" structural constituent of ribosome (33.3%) "IPR001865 (25.1%) IPR005706 (25.1%) IPR023591 (25.1%)" "Small ribosomal subunit protein uS2 (25.1%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.1%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.1%)" MQTPHILIVEDELVTR root "GO:0006355 (19.9%) GO:0000160 (0.2%) GO:0045892 (0%)" "GO:0005829 (19.8%) GO:0032993 (19.8%) GO:0005737 (0.1%)" "GO:0000156 (19.9%) GO:0000976 (19.8%) GO:0004519 (0.4%)" "regulation of DNA-templated transcription (19.9%) phosphorelay signal transduction system (0.2%) negative regulation of DNA-templated transcription (0%)" "cytosol (19.8%) protein-DNA complex (19.8%) cytoplasm (0.1%)" "phosphorelay response regulator activity (19.9%) transcription cis-regulatory region binding (19.8%) endonuclease activity (0.4%)" "IPR011006 (16.8%) IPR001789 (16.8%) IPR039420 (16.6%)" "CheY-like superfamily (16.8%) Signal transduction response regulator, receiver domain (16.8%) Transcriptional regulatory protein WalR-like (16.6%)" ELKDMIGFGGSPR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR011703 (25%) IPR027417 (25%) IPR041628 (25%)" "ATPase, AAA-3 (25%) P-loop containing nucleoside triphosphate hydrolase (25%) ChlI/MoxR, AAA lid domain (25%)" SLSELFMTHPPLDKR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 3.4.24.- (100%) Metalloendopeptidases (100%) "GO:0006508 (25.2%) GO:0009266 (0%)" "GO:0005886 (24.7%) GO:0016020 (0%)" "GO:0004222 (24.8%) GO:0008270 (24.1%) GO:0046872 (0.8%)" "proteolysis (25.2%) response to temperature stimulus (0%)" "plasma membrane (24.7%) membrane (0%)" "metalloendopeptidase activity (24.8%) zinc ion binding (24.1%) metal ion binding (0.8%)" "IPR001915 (33.7%) IPR050083 (33.5%) IPR022919 (32.8%)" "Peptidase M48 (33.7%) Membrane-localized HtpX protease (33.5%) Peptidase M48, protease HtpX, putative (32.8%)" IHLASVTPLVDAAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.4%) GO:0006096 (16.4%) GO:0019563 (16.4%)" "GO:0005829 (16.4%) GO:0016020 (0.6%)" "GO:0004807 (16.4%) GO:0016853 (0.2%)" "gluconeogenesis (16.4%) glycolytic process (16.4%) glycerol catabolic process (16.4%)" "cytosol (16.4%) membrane (0.6%)" "triose-phosphate isomerase activity (16.4%) isomerase activity (0.2%)" "IPR000652 (19.8%) IPR013785 (19.8%) IPR020861 (19.8%)" "Triosephosphate isomerase (19.8%) Aldolase-type TIM barrel (19.8%) Triosephosphate isomerase, active site (19.8%)" IYKEGVEKGNEEAGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides MKFELIQLPYANDGLEPVISK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0004784 (50%) GO:0046872 (50%)" "superoxide dismutase activity (50%) metal ion binding (50%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" ALAAPDPIPESIYDFVLPEPYIPQK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (27.1%) GO:0003863 (6.3%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (27.1%) branched-chain 2-oxo acid dehydrogenase activity (6.3%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" LRELFGTLLAEIQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0016787 (50%) GO:0046872 (50%)" "hydrolase activity (50%) metal ion binding (50%)" IPR039461 (100%) Peptidase family M49 (100%) YKDVPDKELPR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.4.2.11 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (100%) "GO:0006094 (33.3%) GO:0006096 (33.3%)" GO:0004619 (33.3%) "gluconeogenesis (33.3%) glycolytic process (33.3%)" phosphoglycerate mutase activity (33.3%) "IPR001345 (25%) IPR005952 (25%) IPR013078 (25%)" "Phosphoglycerate/bisphosphoglycerate mutase, active site (25%) Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%)" MYYLCHAYQPGSGFYQGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.2.1.37 (75%) 3.2.1.- (25%)" "xylan 1,4-beta-xylosidase (75%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (25%)" GO:0005975 (50%) "GO:0004553 (44.7%) GO:0009044 (5.3%)" carbohydrate metabolic process (50%) "hydrolase activity, hydrolyzing O-glycosyl compounds (44.7%) xylan 1,4-beta-xylosidase activity (5.3%)" "IPR006710 (20%) IPR013320 (20%) IPR023296 (20%)" "Glycoside hydrolase, family 43 (20%) Concanavalin A-like lectin/glucanase domain superfamily (20%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (20%)" GTAFEGKSLEEIIR Bacteria Bacteria 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0000303 (0.3%) GO:0006801 (0.3%) GO:0019430 (0.3%)" "GO:0005737 (30.8%) GO:0005829 (0.3%) GO:0016020 (0.3%)" "GO:0004784 (33%) GO:0046914 (30.5%) GO:0046872 (2.2%)" "response to superoxide (0.3%) superoxide metabolic process (0.3%) removal of superoxide radicals (0.3%)" "cytoplasm (30.8%) cytosol (0.3%) membrane (0.3%)" "superoxide dismutase activity (33%) transition metal ion binding (30.5%) metal ion binding (2.2%)" "IPR019831 (16.8%) IPR036324 (16.8%) IPR001189 (16.7%)" "Manganese/iron superoxide dismutase, N-terminal (16.8%) Manganese/iron superoxide dismutase, N-terminal domain superfamily (16.8%) Manganese/iron superoxide dismutase (16.7%)" IEEELGSLAVYGYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" MAVSEEQLANRSEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.5.1.2 (100%) DNA ligase (NAD(+)) (100%) "GO:0006260 (20%) GO:0006281 (20%)" GO:0005829 (20%) "GO:0003911 (20%) GO:0046872 (20%)" "DNA replication (20%) DNA repair (20%)" cytosol (20%) "DNA ligase (NAD+) activity (20%) metal ion binding (20%)" "IPR001357 (9.1%) IPR001679 (9.1%) IPR004149 (9.1%)" "BRCT domain (9.1%) NAD-dependent DNA ligase (9.1%) Zinc-finger, NAD-dependent DNA ligase C4-type (9.1%)" DITLAMDCAASEFYKDGKYVLAGEGNK root "4.2.1.11 (99.9%) 6.3.4.2 (0.1%)" "phosphopyruvate hydratase (99.9%) CTP synthase (glutamine hydrolyzing) (0.1%)" "GO:0006096 (16.7%) GO:0006396 (0%) GO:0006401 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (15.9%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" "glycolytic process (16.7%) RNA processing (0%) RNA catabolic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (15.9%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020810 (16.8%) IPR036849 (16.8%)" "Enolase (16.8%) Enolase, C-terminal TIM barrel domain (16.8%) Enolase-like, C-terminal domain superfamily (16.8%)" AAQQQMEQSLESIQR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium "IPR010310 (50%) IPR036689 (50%)" "Type VII secretion system ESAT-6-like (50%) ESAT-6-like superfamily (50%)" WQIVNQNDR root "5.1.3.3 (99.7%) 2.7.1.6 (0.3%)" "aldose 1-epimerase (99.7%) galactokinase (0.3%)" "GO:0006006 (19.9%) GO:0033499 (19.9%) GO:0006012 (0.1%)" "GO:0005737 (19.9%) GO:0005829 (0.1%)" "GO:0030246 (20%) GO:0004034 (19.9%) GO:0016853 (0.1%)" "glucose metabolic process (19.9%) galactose catabolic process via UDP-galactose, Leloir pathway (19.9%) galactose metabolic process (0.1%)" "cytoplasm (19.9%) cytosol (0.1%)" "carbohydrate binding (20%) aldose 1-epimerase activity (19.9%) isomerase activity (0.1%)" "IPR008183 (14.5%) IPR011013 (14.5%) IPR014718 (14.4%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (14.5%) Galactose mutarotase-like domain superfamily (14.5%) Glycoside hydrolase-type carbohydrate-binding (14.4%)" VLADLAMNHPEAFK root "GO:0006412 (16.8%) GO:0000027 (15.8%) GO:0032790 (0%)" "GO:0005840 (16.9%) GO:1990904 (16.8%) GO:0005829 (0%)" "GO:0003735 (16.8%) GO:0019843 (16.8%) GO:0003743 (0%)" "translation (16.8%) ribosomal large subunit assembly (15.8%) ribosome disassembly (0%)" "ribosome (16.9%) ribonucleoprotein complex (16.8%) cytosol (0%)" "structural constituent of ribosome (16.8%) rRNA binding (16.8%) translation initiation factor activity (0%)" "IPR005813 (33.3%) IPR035566 (33.2%) IPR049946 (33%)" "Large ribosomal subunit protein bL20 (33.3%) Ribosomal protein bL20, C-terminal (33.2%) Large ribosomal subunit protein bL20, conserved site (33%)" LYFCIDFLHVKPGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043043 (32.8%) "GO:0005829 (32.4%) GO:0005737 (0.8%)" GO:0003746 (34%) peptide biosynthetic process (32.8%) "cytosol (32.4%) cytoplasm (0.8%)" translation elongation factor activity (34%) "IPR008991 (11.2%) IPR013185 (11.2%) IPR014722 (11.2%)" "Translation protein SH3-like domain superfamily (11.2%) Translation elongation factor, KOW-like (11.2%) Large ribosomal subunit protein uL2, domain 2 (11.2%)" MEVDSVPEGLDEISRK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0034605 (19.6%) GO:0042026 (19.6%) GO:0006508 (1.1%)" GO:0005737 (19.6%) "GO:0005524 (19.6%) GO:0016887 (19.6%) GO:0008233 (1.1%)" "cellular response to heat (19.6%) protein refolding (19.6%) proteolysis (1.1%)" cytoplasm (19.6%) "ATP binding (19.6%) ATP hydrolysis activity (19.6%) peptidase activity (1.1%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" EGGDRPYRPR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.- (100%) Transferring other groups (100%) "GO:0000455 (33.2%) GO:0001522 (0.1%) GO:0006364 (0.1%)" "GO:0003723 (33.3%) GO:0120159 (33.2%) GO:0009982 (0.1%)" "enzyme-directed rRNA pseudouridine synthesis (33.2%) pseudouridine synthesis (0.1%) rRNA processing (0.1%)" "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.2%) pseudouridine synthase activity (0.1%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" VFPDKPITEKPLAVR root "GO:0006412 (19.9%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (20%) GO:0005840 (0.3%) GO:0005737 (0%)" "GO:0003735 (20%) GO:0019843 (20%) GO:0000049 (19.8%)" "translation (19.9%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (20%) ribosome (0.3%) cytoplasm (0%)" "structural constituent of ribosome (20%) rRNA binding (20%) tRNA binding (19.8%)" "IPR000114 (20%) IPR016180 (20%) IPR020798 (20%)" "Large ribosomal subunit protein uL16, bacteria (20%) Large ribosomal subunit protein uL16 domain (20%) Large ribosomal subunit protein uL16, conserved site (20%)" DMQDMEFTVQEGK Pseudomonadati Bacteria Pseudomonadati 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25.1%) GO:0016301 (25.1%) GO:0050242 (25.1%)" "ATP binding (25.1%) kinase activity (25.1%) pyruvate, phosphate dikinase activity (25.1%)" "IPR002192 (10.1%) IPR010121 (10.1%) IPR008279 (10%)" "Pyruvate phosphate dikinase, AMP/ATP-binding (10.1%) Pyruvate, phosphate dikinase (10.1%) PEP-utilising enzyme, mobile domain (10%)" LGKQVQLVGDDLFVTNTER Veillonella Bacteria Bacillati Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" ETAKELVLR root 2.7.11.1 (100%) non-specific serine/threonine protein kinase (100%) "GO:0006936 (5.8%) GO:0055003 (5.8%) GO:0055008 (5.8%)" "GO:0030018 (6.1%) GO:0005634 (5.8%) GO:0015629 (5.8%)" "GO:0046872 (6.8%) GO:0004674 (6.1%) GO:0005516 (6.1%)" "muscle contraction (5.8%) cardiac myofibril assembly (5.8%) cardiac muscle tissue morphogenesis (5.8%)" "Z disc (6.1%) nucleus (5.8%) actin cytoskeleton (5.8%)" "metal ion binding (6.8%) protein serine/threonine kinase activity (6.1%) calmodulin binding (6.1%)" "IPR003598 (7.9%) IPR003599 (7.9%) IPR003961 (7.9%)" "Immunoglobulin subtype 2 (7.9%) Immunoglobulin domain subtype (7.9%) Fibronectin type III (7.9%)" SIQGQNEVTSNPIKVTCEYQLER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" VTIIVVPTDEEFMIAADTLEILDKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" MINTSTSDENLCGLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (20%) IPR011013 (20%) IPR014718 (20%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (20%) Galactose mutarotase-like domain superfamily (20%) Glycoside hydrolase-type carbohydrate-binding (20%)" TNADTPHDASIAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" HGESAWNKENR root "5.4.2.11 (94.1%) 5.4.2.4 (5%) 5.4.2.1 (0.8%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (94.1%) bisphosphoglycerate mutase (5%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.8%)" "GO:0006096 (33.7%) GO:0006094 (30.4%)" "GO:0004619 (31.4%) GO:0016868 (2.3%) GO:0016791 (2%)" "glycolytic process (33.7%) gluconeogenesis (30.4%)" "phosphoglycerate mutase activity (31.4%) intramolecular phosphotransferase activity (2.3%) phosphatase activity (2%)" "IPR005952 (25.1%) IPR013078 (25.1%) IPR029033 (25.1%)" "Phosphoglycerate mutase 1 (25.1%) Histidine phosphatase superfamily, clade-1 (25.1%) Histidine phosphatase superfamily (25.1%)" VVVVCPNDPHTEYVITR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "2.3.1.8 (66.7%) 2.3.1.19 (33.3%)" "phosphate acetyltransferase (66.7%) phosphate butyryltransferase (33.3%)" "GO:0016746 (87.5%) GO:0008959 (8.3%) GO:0050182 (4.2%)" "acyltransferase activity (87.5%) phosphate acetyltransferase activity (8.3%) phosphate butyryltransferase activity (4.2%)" "IPR002505 (33.3%) IPR012147 (33.3%) IPR050500 (33.3%)" "Phosphate acetyl/butaryl transferase (33.3%) Phosphate acetyl/butyryltransferase (33.3%) Phosphate Acetyltransferase/Butyryltransferase (33.3%)" IQHLWDLTHYALDGFR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.50 (100%) serine C-palmitoyltransferase (100%) GO:0030148 (22.9%) GO:0016020 (22.9%) "GO:0030170 (25.7%) GO:0008483 (14.3%) GO:0016740 (8.6%)" sphingolipid biosynthetic process (22.9%) membrane (22.9%) "pyridoxal phosphate binding (25.7%) transaminase activity (14.3%) transferase activity (8.6%)" "IPR001917 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class-II, pyridoxal-phosphate binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" VNIPTAMPLLYELDENFKPIKPR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 5.4.2.11 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (100%) "GO:0006094 (33.3%) GO:0006096 (33.3%)" GO:0004619 (33.3%) "gluconeogenesis (33.3%) glycolytic process (33.3%)" phosphoglycerate mutase activity (33.3%) "IPR029033 (25.7%) IPR001345 (24.8%) IPR005952 (24.8%)" "Histidine phosphatase superfamily (25.7%) Phosphoglycerate/bisphosphoglycerate mutase, active site (24.8%) Phosphoglycerate mutase 1 (24.8%)" DNEVFTPIDLINAK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (20.1%) GO:0006508 (0.2%) GO:0006633 (0%)" "GO:0000428 (20.1%) GO:0015934 (0%) GO:0031981 (0%)" "GO:0003677 (20.1%) GO:0003899 (20.1%) GO:0032549 (18.9%)" "DNA-templated transcription (20.1%) proteolysis (0.2%) fatty acid biosynthetic process (0%)" "DNA-directed RNA polymerase complex (20.1%) large ribosomal subunit (0%) nuclear lumen (0%)" "DNA binding (20.1%) DNA-directed RNA polymerase activity (20.1%) ribonucleoside binding (18.9%)" "IPR007645 (8.2%) IPR015712 (7.7%) IPR019462 (7.7%)" "RNA polymerase Rpb2, domain 3 (8.2%) DNA-directed RNA polymerase, subunit 2 (7.7%) DNA-directed RNA polymerase, beta subunit, external 1 domain (7.7%)" GVIIGQLAETVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" MKQGIHPDYHAVQVTCSCGNTFVTR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0006412 (16.7%) "GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16.7%) GO:0046872 (16.7%)" translation (16.7%) "ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%) metal ion binding (16.7%)" "IPR002150 (25%) IPR027491 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL31 type A/B (25%) Large ribosomal subunit protein bL31 type A (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" ACADNSIMKNPEIVSAFSYAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20.2%) IPR011258 (20.2%) IPR036646 (20.2%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.2%) BPG-independent PGAM, N-terminal (20.2%) BPG-independent phosphoglycerate mutase, domain B superfamily (20.2%)" INHSISPMDNPSQIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001854 (50%) IPR036049 (50%)" "Large ribosomal subunit protein uL29 (50%) Large ribosomal subunit protein uL29 superfamily (50%)" LTDIAKEYGISK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" ATIIDPTDHPKKEEYAQLLCELR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0008959 (50%) GO:0016407 (50%)" "phosphate acetyltransferase activity (50%) acetyltransferase activity (50%)" "IPR002505 (16.7%) IPR004614 (16.7%) IPR012147 (16.7%)" "Phosphate acetyl/butaryl transferase (16.7%) Phosphate acetyltransferase (16.7%) Phosphate acetyl/butyryltransferase (16.7%)" LFTEIAEQMEQR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.6%) IPR036373 (33.6%) IPR047859 (32.9%)" "Large ribosomal subunit protein bL17 (33.6%) Large ribosomal subunit protein bL17 superfamily (33.6%) Large ribosomal subunit protein bL17, conserved site (32.9%)" YGAPPHGGLAYGLDR Bacteria Bacteria "6.1.1.12 (88.1%) 6.1.1.23 (11.9%)" "aspartate--tRNA ligase (88.1%) aspartate--tRNA(Asn) ligase (11.9%)" GO:0006422 (18%) GO:0005737 (17.6%) "GO:0004815 (18%) GO:0005524 (18%) GO:0003676 (17%)" aspartyl-tRNA aminoacylation (18%) cytoplasm (17.6%) "aspartate-tRNA ligase activity (18%) ATP binding (18%) nucleic acid binding (17%)" "IPR004364 (9.4%) IPR045864 (9.4%) IPR002312 (9.2%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (9.4%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (9.4%) Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.2%)" NQSKEYQESILPAGAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.2.1.1 (95%) 2.2.1.- (5%)" "transketolase (95%) Transketolases and transaldolases (5%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" PTAEELANYGEPDFVCFNASK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17%) GO:0005829 (17%) "GO:0004612 (17%) GO:0005524 (17%) GO:0046872 (17%)" gluconeogenesis (17%) cytosol (17%) "phosphoenolpyruvate carboxykinase (ATP) activity (17%) ATP binding (17%) metal ion binding (17%)" "IPR001272 (25.2%) IPR008210 (25.2%) IPR013035 (24.8%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.2%) Phosphoenolpyruvate carboxykinase, N-terminal (25.2%) Phosphoenolpyruvate carboxykinase, C-terminal (24.8%)" GYPGATFEAAYTMCK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (25%) GO:0016052 (25%)" GO:0005737 (25%) GO:0004139 (25%) "deoxyribonucleotide catabolic process (25%) carbohydrate catabolic process (25%)" cytoplasm (25%) deoxyribose-phosphate aldolase activity (25%) "IPR002915 (33.3%) IPR011343 (33.3%) IPR013785 (33.3%)" "DeoC/FbaB/LacD aldolase (33.3%) Deoxyribose-phosphate aldolase (33.3%) Aldolase-type TIM barrel (33.3%)" GIEVLGTCDNTYPLQKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.5%) GO:0005737 (17.9%) "GO:0003676 (20.5%) GO:0004816 (20.5%) GO:0005524 (20.5%)" asparaginyl-tRNA aminoacylation (20.5%) cytoplasm (17.9%) "nucleic acid binding (20.5%) asparagine-tRNA ligase activity (20.5%) ATP binding (20.5%)" "IPR004364 (14.4%) IPR004365 (14.4%) IPR004522 (14.4%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (14.4%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (14.4%) Asparagine-tRNA ligase (14.4%)" GTLAMQINPMTCGSSFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" HLNATIINEGDINTR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0006085 (24.4%) GO:0006083 (0.2%) GO:0019413 (0.2%)" "GO:0005737 (33.3%) GO:0005829 (0.2%)" "GO:0008959 (38.9%) GO:0016746 (1.1%) GO:0016407 (0.4%)" "acetyl-CoA biosynthetic process (24.4%) acetate metabolic process (0.2%) acetate biosynthetic process (0.2%)" "cytoplasm (33.3%) cytosol (0.2%)" "phosphate acetyltransferase activity (38.9%) acyltransferase activity (1.1%) acetyltransferase activity (0.4%)" "IPR050500 (12.1%) IPR010766 (12%) IPR028979 (12%)" "Phosphate Acetyltransferase/Butyryltransferase (12.1%) DRTGG (12%) HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily (12%)" EEALFELSAEDFAKIILAYEPVWAIGTGK Candidatus Limisoma intestinavium Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Candidatus Limisoma Candidatus Limisoma intestinavium 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" TGHMEAVTRFMVAFGKGLGLETLQDEVGNVLIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" INVIGNGVVLDPLLFK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (15.7%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (15.7%)" "IPR001114 (14.3%) IPR018220 (14.3%) IPR027417 (14.3%)" "Adenylosuccinate synthetase (14.3%) Adenylosuccinate synthase, GTP-binding site (14.3%) P-loop containing nucleoside triphosphate hydrolase (14.3%)" QDLSIQVHPTDEIAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (32.5%) "GO:0004476 (33.8%) GO:0008270 (33.8%)" carbohydrate metabolic process (32.5%) "mannose-6-phosphate isomerase activity (33.8%) zinc ion binding (33.8%)" "IPR011051 (16.9%) IPR014710 (16.9%) IPR046457 (16.9%)" "RmlC-like cupin domain superfamily (16.9%) RmlC-like jelly roll fold (16.9%) Phosphomannose isomerase type I, catalytic domain (16.9%)" HHQTYVNNANAALESLPEFANLPVEELITK root 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0006801 (0.2%) GO:0006979 (0.2%) GO:0009408 (0.2%)" "GO:0005737 (32.3%) GO:0005829 (0.2%)" "GO:0004784 (32.3%) GO:0030145 (29.2%) GO:0046872 (3.3%)" "superoxide metabolic process (0.2%) response to oxidative stress (0.2%) response to heat (0.2%)" "cytoplasm (32.3%) cytosol (0.2%)" "superoxide dismutase activity (32.3%) manganese ion binding (29.2%) metal ion binding (3.3%)" "IPR001189 (17.1%) IPR019831 (17.1%) IPR036324 (17.1%)" "Manganese/iron superoxide dismutase (17.1%) Manganese/iron superoxide dismutase, N-terminal (17.1%) Manganese/iron superoxide dismutase, N-terminal domain superfamily (17.1%)" FNPEELISYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.3.8.1 (100%) short-chain acyl-CoA dehydrogenase (100%) "GO:0050660 (50%) GO:0003995 (37.5%) GO:0016937 (12.5%)" "flavin adenine dinucleotide binding (50%) acyl-CoA dehydrogenase activity (37.5%) short-chain fatty acyl-CoA dehydrogenase activity (12.5%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009075 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.1%)" HMTADAAAHEVIEGQASALEELDDEYLKER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.7.3.9 (100%) phosphoenolpyruvate--protein phosphotransferase (100%) "GO:0009401 (20.5%) GO:0015764 (0.2%)" "GO:0005737 (19.2%) GO:0005829 (0.2%) GO:0016020 (0.2%)" "GO:0008965 (19.9%) GO:0016301 (19.4%) GO:0046872 (19.4%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (20.5%) N-acetylglucosamine transport (0.2%)" "cytoplasm (19.2%) cytosol (0.2%) membrane (0.2%)" "phosphoenolpyruvate-protein phosphotransferase activity (19.9%) kinase activity (19.4%) metal ion binding (19.4%)" "IPR008731 (8.7%) IPR036618 (8.7%) IPR050499 (8.7%)" "Phosphotransferase system, enzyme I N-terminal (8.7%) PtsI, HPr-binding domain superfamily (8.7%) Phosphoenolpyruvate-dependent sugar PTS enzyme (8.7%)" TESDLIGEREVPETALYGVQTLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.7%) GO:0006531 (24.7%)" GO:0005829 (24.7%) "GO:0008797 (24.7%) GO:0016853 (1.3%)" "tricarboxylic acid cycle (24.7%) aspartate metabolic process (24.7%)" cytosol (24.7%) "aspartate ammonia-lyase activity (24.7%) isomerase activity (1.3%)" "IPR000362 (12.6%) IPR008948 (12.6%) IPR018951 (12.6%)" "Fumarate lyase family (12.6%) L-Aspartase-like (12.6%) Fumarase C, C-terminal (12.6%)" YLEENGFEILSSEFVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (33.3%) GO:0005829 (33.3%) GO:0003677 (33.3%) regulation of DNA-templated transcription (33.3%) cytosol (33.3%) DNA binding (33.3%) "IPR002876 (17.4%) IPR026564 (17.4%) IPR029072 (17.4%)" "Transcriptional regulator TACO1-like (17.4%) Transcriptional regulator TACO1-like, domain 3 (17.4%) YebC-like (17.4%)" AAGMSDTQIQQELAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015159 (100%) polysaccharide transmembrane transporter activity (100%) "IPR003715 (33.3%) IPR019554 (33.3%) IPR049712 (33.3%)" "Polysaccharide export protein, N-terminal domain (33.3%) Soluble ligand binding domain (33.3%) Polysaccharide export protein (33.3%)" GKNQLIHGNEFHLLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis TFTKDLFTLFEEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17%) GO:0009090 (17%) GO:0009088 (14.8%)" GO:0005829 (17%) "GO:0004072 (17%) GO:0005524 (17%)" "lysine biosynthetic process via diaminopimelate (17%) homoserine biosynthetic process (17%) threonine biosynthetic process (14.8%)" cytosol (17%) "aspartate kinase activity (17%) ATP binding (17%)" "IPR001048 (14.3%) IPR001341 (14.3%) IPR005260 (14.3%)" "Aspartate/glutamate/uridylate kinase (14.3%) Aspartate kinase (14.3%) Aspartate kinase, monofunctional class (14.3%)" HVYCQKPLTHSVYESR Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) GO:0016020 (1.1%) "GO:0000166 (85.4%) GO:0050112 (13.5%)" membrane (1.1%) "nucleotide binding (85.4%) inositol 2-dehydrogenase (NAD+) activity (13.5%)" "IPR000683 (19.2%) IPR036291 (19.2%) IPR050463 (19.2%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (19.2%) NAD(P)-binding domain superfamily (19.2%) Gfo/Idh/MocA family oxidoreductases and glycosidases (19.2%)" MGNTMLLATVCAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.3%) GO:0006396 (14.1%) GO:0006401 (0.1%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "mRNA catabolic process (14.3%) RNA processing (14.1%) RNA catabolic process (0.1%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8%) IPR012162 (8%) IPR015847 (8%)" "Exoribonuclease, phosphorolytic domain 1 (8%) Polyribonucleotide nucleotidyltransferase (8%) Exoribonuclease, phosphorolytic domain 2 (8%)" SGSIKSPIWR root "GO:0006412 (19.9%) GO:0006353 (0.2%) GO:0006417 (0.2%)" "GO:0005840 (20.2%) GO:1990904 (19.8%) GO:0022625 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.3%) GO:0001070 (0%)" "translation (19.9%) DNA-templated transcription termination (0.2%) regulation of translation (0.2%)" "ribosome (20.2%) ribonucleoprotein complex (19.8%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.3%) RNA-binding transcription regulator activity (0%)" "IPR002136 (33.1%) IPR023574 (33.1%) IPR013005 (33.1%)" "Large ribosomal subunit protein uL4 (33.1%) Large ribosomal subunit protein uL4 domain superfamily (33.1%) Large ribosomal subunit protein uL4-like (33.1%)" YTAERDGIIGDFER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" SALVIQTLANGAVR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0017038 (33%) GO:0051301 (32.9%) GO:0015031 (0.2%)" "GO:0042597 (33.2%) GO:0016020 (0.1%) GO:0030288 (0.1%)" "GO:0016787 (0.1%) GO:0019904 (0.1%) GO:0044877 (0.1%)" "protein import (33%) cell division (32.9%) protein transport (0.2%)" "periplasmic space (33.2%) membrane (0.1%) outer membrane-bounded periplasmic space (0.1%)" "hydrolase activity (0.1%) protein domain specific binding (0.1%) protein-containing complex binding (0.1%)" "IPR011042 (25.2%) IPR011659 (25.2%) IPR014167 (24.9%)" "Six-bladed beta-propeller, TolB-like (25.2%) WD40-like beta-propeller (25.2%) Tol-Pal system protein TolB (24.9%)" GKTVVVEGCEEKLAPLDLIR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0005829 (100%) cytosol (100%) IPR017704 (100%) Putative selenium-binding protein YdfZ (100%) IHSFESCGTVDGPGIR root 1.97.1.4 (100%) [formate-C-acetyltransferase]-activating enzyme (100%) "GO:0006006 (16.7%) GO:0005975 (0%) GO:0006974 (0%)" "GO:0005737 (16.5%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0051539 (16.8%) GO:0046872 (16.8%) GO:0043365 (16.8%)" "glucose metabolic process (16.7%) carbohydrate metabolic process (0%) DNA damage response (0%)" "cytoplasm (16.5%) cytosol (0%) plasma membrane (0%)" "4 iron, 4 sulfur cluster binding (16.8%) metal ion binding (16.8%) [formate-C-acetyltransferase]-activating enzyme activity (16.8%)" "IPR001989 (13.9%) IPR013785 (13.9%) IPR034457 (13.9%)" "Radical-activating enzyme, conserved site (13.9%) Aldolase-type TIM barrel (13.9%) Organic radical-activating enzymes (13.9%)" LADVEDPEQKRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (16.7%) IPR014729 (16.7%) IPR017926 (16.7%)" "GMP synthase, C-terminal (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Glutamine amidotransferase (16.7%)" IIHLTDDSFDTDVLK root 1.8.1.10 (100%) CoA-glutathione reductase (100%) "GO:0045454 (33.1%) GO:0006353 (0.1%)" "GO:0005829 (33.1%) GO:0005737 (0.1%)" "GO:0015035 (33.2%) GO:0003723 (0.1%) GO:0004386 (0.1%)" "cell redox homeostasis (33.1%) DNA-templated transcription termination (0.1%)" "cytosol (33.1%) cytoplasm (0.1%)" "protein-disulfide reductase activity (33.2%) RNA binding (0.1%) helicase activity (0.1%)" "IPR036249 (25%) IPR013766 (24.9%) IPR005746 (24.7%)" "Thioredoxin-like superfamily (25%) Thioredoxin domain (24.9%) Thioredoxin (24.7%)" IIDRLPGSGYLNPEEVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (51.5%) GO:0043758 (21.2%) GO:0003824 (18.2%)" "ATP binding (51.5%) acetate-CoA ligase (ADP-forming) activity (21.2%) catalytic activity (18.2%)" "IPR013815 (20.2%) IPR003781 (17.9%) IPR016102 (17.9%)" "ATP-grasp fold, subdomain 1 (20.2%) CoA-binding (17.9%) Succinyl-CoA synthetase-like (17.9%)" VPYKVVK root "1.3.1.74 (20%) 2.4.1.1 (20%) 5.2.1.8 (20%)" "2-alkenal reductase [NAD(P)(+)] (20%) glycogen phosphorylase (20%) peptidylprolyl isomerase (20%)" "GO:0006298 (1.1%) GO:0006289 (1%) GO:0007165 (0.9%)" "GO:0005737 (3.7%) GO:0000111 (1.1%) GO:0071942 (1.1%)" "GO:0005524 (25.5%) GO:0140662 (25.2%) GO:0051082 (24.2%)" "mismatch repair (1.1%) nucleotide-excision repair (1%) signal transduction (0.9%)" "cytoplasm (3.7%) nucleotide-excision repair factor 2 complex (1.1%) XPC complex (1.1%)" "ATP binding (25.5%) ATP-dependent protein folding chaperone (25.2%) unfolded protein binding (24.2%)" "IPR013126 (14.6%) IPR043129 (14.5%) IPR018181 (14.5%)" "Heat shock protein 70 family (14.6%) ATPase, nucleotide binding domain (14.5%) Heat shock protein 70, conserved site (14.5%)" GRFDHFNINVLDLEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.4.1.5 (100%) lactoylglutathione lyase (100%) GO:0019243 (20%) GO:0005737 (20%) "GO:0004462 (40%) GO:0016829 (20%)" methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (20%) cytoplasm (20%) "lactoylglutathione lyase activity (40%) lyase activity (20%)" "IPR004360 (33.3%) IPR029068 (33.3%) IPR037523 (33.3%)" "Glyoxalase/fosfomycin resistance/dioxygenase domain (33.3%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (33.3%) Vicinal oxygen chelate (VOC), core domain (33.3%)" VKEGDDLMNADR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" DYWTGTVYTTNRR root 3.2.2.4 (100%) AMP nucleosidase (100%) "GO:0009116 (32.5%) GO:0006979 (0.8%)" GO:0005829 (32.5%) "GO:0008714 (32.4%) GO:0004601 (0.8%) GO:0020037 (0.8%)" "nucleoside metabolic process (32.5%) response to oxidative stress (0.8%)" cytosol (32.5%) "AMP nucleosidase activity (32.4%) peroxidase activity (0.8%) heme binding (0.8%)" "IPR000845 (25%) IPR035994 (24.9%) IPR047039 (24.8%)" "Nucleoside phosphorylase domain (25%) Nucleoside phosphorylase superfamily (24.9%) AMP nucleosidase, phosphorylase domain (24.8%)" AEMSEYLFDKLGLSKR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006310 (14.3%) GO:0006417 (14.3%) GO:0006355 (14.2%)" "GO:0005829 (14.3%) GO:0032993 (0.1%) GO:1990177 (0%)" "GO:0030527 (14.3%) GO:0003677 (14.2%) GO:0000976 (0.1%)" "DNA recombination (14.3%) regulation of translation (14.3%) regulation of DNA-templated transcription (14.2%)" "cytosol (14.3%) protein-DNA complex (0.1%) IHF-DNA complex (0%)" "structural constituent of chromatin (14.3%) DNA binding (14.2%) transcription cis-regulatory region binding (0.1%)" "IPR000119 (25%) IPR005684 (25%) IPR010992 (25%)" "Histone-like DNA-binding protein (25%) Integration host factor, alpha subunit (25%) Integration host factor (IHF)-like DNA-binding domain superfamily (25%)" IHVGAALTDLGDDAPEDYIVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0000902 (25.3%) GO:0008360 (25.3%)" GO:0005737 (25.3%) GO:0005524 (24%) "cell morphogenesis (25.3%) regulation of cell shape (25.3%)" cytoplasm (25.3%) ATP binding (24%) "IPR004753 (33.3%) IPR043129 (33.3%) IPR056546 (33.3%)" "Cell shape determining protein MreB (33.3%) ATPase, nucleotide binding domain (33.3%) MreB/MamK-like (33.3%)" VILETGALGSASNIKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (25.2%) GO:0016052 (25.2%)" GO:0005737 (24.5%) GO:0004139 (25.2%) "deoxyribonucleotide catabolic process (25.2%) carbohydrate catabolic process (25.2%)" cytoplasm (24.5%) deoxyribose-phosphate aldolase activity (25.2%) "IPR002915 (33.3%) IPR011343 (33.3%) IPR013785 (33.3%)" "DeoC/FbaB/LacD aldolase (33.3%) Deoxyribose-phosphate aldolase (33.3%) Aldolase-type TIM barrel (33.3%)" VVKPETAENKEAGITVLVPNNDFHASK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR003489 (50%) IPR036567 (50%)" "Ribosome hibernation promoting factor/RaiA (50%) Ribosome hibernation promotion factor-like (50%)" NHPLTDEYSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.24.- (100%) Metalloendopeptidases (100%) GO:0016485 (25%) GO:0005886 (25%) "GO:0004222 (25%) GO:0046872 (25%)" protein processing (25%) plasma membrane (25%) "metalloendopeptidase activity (25%) metal ion binding (25%)" "IPR000718 (20%) IPR008753 (20%) IPR018497 (20%)" "Peptidase M13 (20%) Peptidase M13, N-terminal domain (20%) Peptidase M13, C-terminal domain (20%)" IATDPFVGNLTFFR root "3.6.5.- (50%) 3.6.5.3 (50%)" "Acting on GTP; involved in cellular and subcellular movement (50%) protein-synthesizing GTPase (50%)" "GO:0032790 (17%) GO:0006412 (0%) GO:0006414 (0%)" "GO:0005737 (15.8%) GO:0005829 (0.1%) GO:0005739 (0%)" "GO:0003746 (17.3%) GO:0005525 (17%) GO:0003924 (16.4%)" "ribosome disassembly (17%) translation (0%) translational elongation (0%)" "cytoplasm (15.8%) cytosol (0.1%) mitochondrion (0%)" "translation elongation factor activity (17.3%) GTP binding (17%) GTPase activity (16.4%)" "IPR009000 (6.5%) IPR027417 (6.4%) IPR004161 (6.3%)" "Translation protein, beta-barrel domain superfamily (6.5%) P-loop containing nucleoside triphosphate hydrolase (6.4%) Translation elongation factor EFTu-like, domain 2 (6.3%)" EIPFLYASSAATYGGR root 5.1.3.20 (100%) ADP-glyceromanno-heptose 6-epimerase (100%) "GO:0097171 (21.3%) GO:0009244 (19%) GO:0005975 (7%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0008712 (26.3%) GO:0050661 (26%) GO:0016853 (0.4%)" "ADP-L-glycero-beta-D-manno-heptose biosynthetic process (21.3%) lipopolysaccharide core region biosynthetic process (19%) carbohydrate metabolic process (7%)" "cytosol (0%) membrane (0%)" "ADP-glyceromanno-heptose 6-epimerase activity (26.3%) NADP binding (26%) isomerase activity (0.4%)" "IPR001509 (33.6%) IPR036291 (33.5%) IPR011912 (32.9%)" "NAD-dependent epimerase/dehydratase (33.6%) NAD(P)-binding domain superfamily (33.5%) ADP-L-glycero-D-manno-heptose-6-epimerase (32.9%)" SLYEADLVDEAKR root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.6%) GO:0006094 (16.6%) GO:0008615 (0%)" "GO:0005829 (16.6%) GO:0005737 (0%)" "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "glycolytic process (16.6%) gluconeogenesis (16.6%) pyridoxine biosynthetic process (0%)" "cytosol (16.6%) cytoplasm (0%)" "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR015824 (25.3%) IPR036043 (25.3%) IPR001576 (25.3%)" "Phosphoglycerate kinase, N-terminal (25.3%) Phosphoglycerate kinase superfamily (25.3%) Phosphoglycerate kinase (25.3%)" TSAFAVAMDDSPLYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) ATGTTTITASSKDR Parabacteroides merdae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides merdae "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" LADKTFDVAMANFKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (0.7%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (0.7%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" DKANEIINYLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.4%) GO:0006044 (32.4%)" "GO:0004342 (32.4%) GO:0016853 (2.7%)" "carbohydrate metabolic process (32.4%) N-acetylglucosamine metabolic process (32.4%)" "glucosamine-6-phosphate deaminase activity (32.4%) isomerase activity (2.7%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" VIFLTADAFGVLPPVSR root 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.5%) "GO:0005829 (17.5%) GO:0005737 (0%)" "GO:0004612 (17.5%) GO:0005524 (17.5%) GO:0046872 (16.8%)" gluconeogenesis (17.5%) "cytosol (17.5%) cytoplasm (0%)" "phosphoenolpyruvate carboxykinase (ATP) activity (17.5%) ATP binding (17.5%) metal ion binding (16.8%)" "IPR001272 (25.4%) IPR013035 (25.4%) IPR015994 (24.7%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.4%) Phosphoenolpyruvate carboxykinase, C-terminal (25.4%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (24.7%)" ALYFSHGFAITWNDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.86 (89.5%) 1.1.1.- (10.5%)" "ketol-acid reductoisomerase (NADP(+)) (89.5%) With NAD(+) or NADP(+) as acceptor (10.5%)" "GO:0009097 (21%) GO:0009099 (21%)" "GO:0004455 (21%) GO:0046872 (21%) GO:0016853 (15.9%)" "isoleucine biosynthetic process (21%) L-valine biosynthetic process (21%)" "ketol-acid reductoisomerase activity (21%) metal ion binding (21%) isomerase activity (15.9%)" "IPR000506 (16.7%) IPR008927 (16.7%) IPR013023 (16.7%)" "Ketol-acid reductoisomerase, C-terminal (16.7%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.7%) Ketol-acid reductoisomerase (16.7%)" SGVEVPKELDR Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0006412 (17.1%) "GO:0005737 (17.1%) GO:0005840 (17.1%) GO:1990904 (14.3%)" "GO:0003735 (17.1%) GO:0070181 (17.1%)" translation (17.1%) "cytoplasm (17.1%) ribosome (17.1%) ribonucleoprotein complex (14.3%)" "structural constituent of ribosome (17.1%) small ribosomal subunit rRNA binding (17.1%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" AMASGVSACLATPFK root 2.3.1.41 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase I (100%) "GO:0006633 (32.9%) GO:1903966 (0%)" "GO:0005829 (32.8%) GO:0005737 (0.1%)" "GO:0004315 (32.9%) GO:0005524 (0.6%) GO:0016301 (0.6%)" "fatty acid biosynthetic process (32.9%) monounsaturated fatty acid biosynthetic process (0%)" "cytosol (32.8%) cytoplasm (0.1%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (32.9%) ATP binding (0.6%) kinase activity (0.6%)" "IPR000794 (16.7%) IPR014030 (16.7%) IPR016039 (16.7%)" "Beta-ketoacyl synthase (16.7%) Beta-ketoacyl synthase-like, N-terminal (16.7%) Thiolase-like (16.7%)" GGHITYVELDGEAQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.17.4.2 (99.1%) 1.1.98.6 (0.9%)" "ribonucleoside-triphosphate reductase (thioredoxin) (99.1%) ribonucleoside-triphosphate reductase (formate) (0.9%)" "GO:0006260 (16.8%) GO:0009265 (16.8%)" GO:0031250 (16.8%) "GO:0008998 (16.8%) GO:0004748 (16.6%) GO:0005524 (15.8%)" "DNA replication (16.8%) 2'-deoxyribonucleotide biosynthetic process (16.8%)" anaerobic ribonucleoside-triphosphate reductase complex (16.8%) "ribonucleoside-triphosphate reductase (thioredoxin) activity (16.8%) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.6%) ATP binding (15.8%)" "IPR012833 (51.4%) IPR005144 (48.6%)" "Ribonucleoside-triphosphate reductase, anaerobic (51.4%) ATP-cone domain (48.6%)" NFDLSPLYR root "GO:0050821 (49.5%) GO:0006431 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (49.5%) GO:0005829 (0.2%)" "GO:0004825 (0.1%) GO:0005524 (0.1%) GO:0042802 (0.1%)" "protein stabilization (49.5%) methionyl-tRNA aminoacylation (0.1%) response to heat (0.1%)" "cytoplasm (49.5%) cytosol (0.2%)" "methionine-tRNA ligase activity (0.1%) ATP binding (0.1%) identical protein binding (0.1%)" "IPR002068 (25.1%) IPR008978 (25.1%) IPR037913 (25%)" "Alpha crystallin/Hsp20 domain (25.1%) HSP20-like chaperone (25.1%) Small heat shock protein IbpA/IbpB, ACD domain (25%)" AAEAYAHFINTPEATEDDLTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0051301 (50%) GO:0009579 (50%) cell division (50%) thylakoid (50%) "IPR011990 (39.5%) IPR019734 (39.5%) IPR051685 (20.9%)" "Tetratricopeptide-like helical domain superfamily (39.5%) Tetratricopeptide repeat (39.5%) Ycf3/AcsC/BcsC/TPR Multifunctional (20.9%)" QYFNETDQTVNKK KMSGAGMMDCKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (49.3%) GO:0003746 (50.7%) cytoplasm (49.3%) translation elongation factor activity (50.7%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" VVVIGDNQETGKVEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR027823 (100%) Domain of unknown function DUF4468 with TBP-like fold (100%) KAYGESASGIGTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0000917 (14.6%) GO:0043093 (13.6%) GO:0051258 (13.6%)" "GO:0005737 (14.6%) GO:0032153 (14.6%)" "GO:0003924 (14.6%) GO:0005525 (14.6%)" "division septum assembly (14.6%) FtsZ-dependent cytokinesis (13.6%) protein polymerization (13.6%)" "cytoplasm (14.6%) cell division site (14.6%)" "GTPase activity (14.6%) GTP binding (14.6%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" MQSDEGEINPVDILR root "3.1.-.- (95.2%) 3.1.26.- (3.2%) 3.6.3.12 (1.6%)" "Acting on ester bonds (95.2%) Endoribonucleases producing 5'-phosphomonoesters (3.2%) Transferred entry: 7.2.2.6 (1.6%)" GO:0006401 (0.2%) GO:0005829 (0.1%) "GO:0004521 (50.4%) GO:0016787 (49.1%) GO:0016891 (0.2%)" RNA catabolic process (0.2%) cytosol (0.1%) "RNA endonuclease activity (50.4%) hydrolase activity (49.1%) RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism (0.2%)" "IPR013527 (33.7%) IPR005229 (33.6%) IPR013551 (32.7%)" "Endoribonuclease YicC-like, N-terminal (33.7%) Endoribonuclease YicC/YloC-like (33.6%) Endoribonuclease YicC-like, C-terminal (32.7%)" ALIEAELEQQKKEIIGKLEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.7%) "GO:0022627 (24%) GO:0005840 (1.1%) GO:1990904 (0.7%)" "GO:0003729 (24.7%) GO:0003735 (24.7%) GO:0004654 (0.2%)" translation (24.7%) "cytosolic small ribosomal subunit (24%) ribosome (1.1%) ribonucleoprotein complex (0.7%)" "mRNA binding (24.7%) structural constituent of ribosome (24.7%) polyribonucleotide nucleotidyltransferase activity (0.2%)" "IPR003029 (24.9%) IPR012340 (24.9%) IPR035104 (24.9%)" "S1 domain (24.9%) Nucleic acid-binding, OB-fold (24.9%) Ribosomal protein S1-like (24.9%)" NSPIPEDQRKPEDNSSMYSGSLTGLMAHIITSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50%) GO:0046872 (50%)" "alkaline phosphatase activity (50%) metal ion binding (50%)" "IPR001952 (50%) IPR017850 (50%)" "Alkaline phosphatase (50%) Alkaline-phosphatase-like, core domain superfamily (50%)" ALHLLEDLEFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0016149 (50%) cytoplasm (50%) translation release factor activity, codon specific (50%) "IPR000352 (25%) IPR004374 (25%) IPR005139 (25%)" "Peptide chain release factor class I (25%) Peptide chain release factor 2 (25%) Peptide chain release factor (25%)" VLVPDLNAGCSLADSCPADKFAEFVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.5.1.72 (100%) quinolinate synthase (100%) GO:0034628 (19.6%) GO:0005829 (19.6%) "GO:0008987 (19.6%) GO:0046872 (19.6%) GO:0051539 (19.6%)" 'de novo' NAD+ biosynthetic process from L-aspartate (19.6%) cytosol (19.6%) "quinolinate synthetase A activity (19.6%) metal ion binding (19.6%) 4 iron, 4 sulfur cluster binding (19.6%)" "IPR003473 (33.3%) IPR023066 (33.3%) IPR036094 (33.3%)" "Quinolinate synthetase A (33.3%) Quinolinate synthase A, type 2 (33.3%) Quinolinate synthetase A superfamily (33.3%)" YDSTHGRFDGTVEVKDGHLIVNGK root "1.2.1.- (93.2%) 1.2.1.12 (6.8%)" "With NAD(+) or NADP(+) as acceptor (93.2%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (6.8%)" "GO:0072524 (19.9%) GO:0006006 (18.8%) GO:0006096 (0.5%)" "GO:0005737 (0.4%) GO:0005576 (0%) GO:0005829 (0%)" "GO:0051287 (20.6%) GO:0050661 (18.8%) GO:0004365 (16.8%)" "pyridine-containing compound metabolic process (19.9%) glucose metabolic process (18.8%) glycolytic process (0.5%)" "cytoplasm (0.4%) extracellular region (0%) cytosol (0%)" "NAD binding (20.6%) NADP binding (18.8%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (16.8%)" "IPR020828 (17.1%) IPR020831 (17.1%) IPR036291 (17.1%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17.1%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.1%) NAD(P)-binding domain superfamily (17.1%)" TMACGIAGLSVAADSLSAIK root "2.3.1.54 (99.7%) 2.3.1.- (0.3%)" "formate C-acetyltransferase (99.7%) Transferring groups other than amino-acyl groups (0.3%)" "GO:0006006 (30.8%) GO:0005975 (0.1%) GO:0044814 (0%)" "GO:0005829 (32.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0008861 (32.1%) GO:0016829 (4.4%) GO:0016746 (0.4%)" "glucose metabolic process (30.8%) carbohydrate metabolic process (0.1%) pyruvate fermentation via PFL (0%)" "cytosol (32.1%) cytoplasm (0%) plasma membrane (0%)" "formate C-acetyltransferase activity (32.1%) lyase activity (4.4%) acyltransferase activity (0.4%)" "IPR004184 (20.3%) IPR050244 (20.3%) IPR001150 (20%)" "Pyruvate formate lyase domain (20.3%) Autonomous Glycyl Radical Cofactor (20.3%) Glycine radical domain (20%)" LKAEEQAADQVAYQQAVQAIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR025347 (100%) Protein of unknown function DUF4251 (100%) LEIVKADYADQVDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" EILLGSNQYPNFTEVAADKIQEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" MKPANAADLDNLLDAEGYK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0019464 (25.9%) GO:0009249 (22.2%)" "GO:0005829 (25.9%) GO:0005960 (25.9%)" "glycine decarboxylation via glycine cleavage system (25.9%) protein lipoylation (22.2%)" "cytosol (25.9%) glycine cleavage complex (25.9%)" "IPR000089 (16.7%) IPR002930 (16.7%) IPR003016 (16.7%)" "Biotin/lipoyl attachment (16.7%) Glycine cleavage system H-protein (16.7%) 2-oxo acid dehydrogenase, lipoyl-binding site (16.7%)" VMIHQPMGGAEGQASDIEITAR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.4.21.92 (100%) endopeptidase Clp (100%) GO:0006515 (16.7%) "GO:0005737 (16.7%) GO:0009368 (16.7%)" "GO:0004176 (16.7%) GO:0004252 (16.7%) GO:0051117 (16.7%)" protein quality control for misfolded or incompletely synthesized proteins (16.7%) "cytoplasm (16.7%) endopeptidase Clp complex (16.7%)" "ATP-dependent peptidase activity (16.7%) serine-type endopeptidase activity (16.7%) ATPase binding (16.7%)" "IPR001907 (27.6%) IPR023562 (27.6%) IPR029045 (27.6%)" "ATP-dependent Clp protease proteolytic subunit (27.6%) Clp protease proteolytic subunit /Translocation-enhancing protein TepA (27.6%) ClpP/crotonase-like domain superfamily (27.6%)" TFVDDAGNVIIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25.7%) IPR002933 (25.7%) IPR011650 (25.7%)" "Peptidase M20C, Xaa-His dipeptidase (25.7%) Peptidase M20 (25.7%) Peptidase M20, dimerisation domain (25.7%)" MTGTLLPYSQSNIFQGTTY Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR025347 (100%) Protein of unknown function DUF4251 (100%) NELYETFITTAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" IIEKLEEDEDVQNVFHNMKEDDSEEE Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (33.3%) GO:0005829 (33.3%) GO:0003677 (33.3%) regulation of DNA-templated transcription (33.3%) cytosol (33.3%) DNA binding (33.3%) "IPR002876 (16.7%) IPR017856 (16.7%) IPR026564 (16.7%)" "Transcriptional regulator TACO1-like (16.7%) Integrase-like, N-terminal (16.7%) Transcriptional regulator TACO1-like, domain 3 (16.7%)" ALLAAFDFPFRK root "GO:0006412 (16.6%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (17%) GO:1990904 (16.5%) GO:0022625 (0.1%)" "GO:0000049 (16.6%) GO:0003735 (16.6%) GO:0019843 (16.6%)" "translation (16.6%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (17%) ribonucleoprotein complex (16.5%) cytosolic large ribosomal subunit (0.1%)" "tRNA binding (16.6%) structural constituent of ribosome (16.6%) rRNA binding (16.6%)" "IPR022803 (16.8%) IPR031309 (16.8%) IPR002132 (16.8%)" "Large ribosomal subunit protein uL5 domain superfamily (16.8%) Large ribosomal subunit protein uL5, C-terminal (16.8%) Large ribosomal subunit protein uL5 (16.8%)" GVIMDGDKSEHLLEAIPVMASYCDIIGVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.3.11 (100%) N-succinylornithine carbamoyltransferase (100%) "GO:0019240 (25%) GO:0042450 (25%)" "GO:0004585 (25%) GO:0016597 (25%)" "citrulline biosynthetic process (25%) L-arginine biosynthetic process via ornithine (25%)" "ornithine carbamoyltransferase activity (25%) amino acid binding (25%)" "IPR006131 (20.4%) IPR006132 (20.4%) IPR006130 (19.7%)" "Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20.4%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20.4%) Aspartate/ornithine carbamoyltransferase (19.7%)" IDDRLIHGQVATR root "2.7.1.191 (98.6%) 2.7.1.69 (0.7%) 2.7.1.- (0.7%)" "protein-N(pi)-phosphohistidine--D-mannose phosphotransferase (98.6%) Transferred entry: 2.7.1.191, 2.7.1.192, 2.7.1.193, 2.7.1.194, 2.7.1.1952.7.1.196, 2.7.1.197, 2.7.1.198, 2.7.1.199, 2.7.1.200, 2.7.1.2012.7.1.202, 2.7.1.203, 2.7.1.204, 2.7.1.205, 2.7.1.206, 2.7.1.207 an2.7.1.208 (0.7%) Phosphotransferases with an alcohol group as acceptor (0.7%)" "GO:0009401 (20.1%) GO:0015761 (0%) GO:0015764 (0%)" "GO:0005737 (20.1%) GO:0005886 (19.1%) GO:0016020 (0.1%)" "GO:0008982 (20.1%) GO:0016301 (20.1%) GO:0016740 (0.1%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (20.1%) mannose transmembrane transport (0%) N-acetylglucosamine transport (0%)" "cytoplasm (20.1%) plasma membrane (19.1%) membrane (0.1%)" "protein-N(PI)-phosphohistidine-sugar phosphotransferase activity (20.1%) kinase activity (20.1%) transferase activity (0.1%)" "IPR004720 (12.9%) IPR036667 (12.9%) IPR018455 (12.5%)" "Phosphotransferase system, sorbose subfamily IIB component (12.9%) Phosphotransferase system, sorbose subfamily IIB component superfamily (12.9%) Phosphotransferase system, sorbose subfamily IIB component, subgroup (12.5%)" VINLDKESEPDIYAAIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.4%) GO:0005829 (17.4%) "GO:0004612 (17.4%) GO:0005524 (17.4%) GO:0046872 (16.2%)" gluconeogenesis (17.4%) cytosol (17.4%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.4%) ATP binding (17.4%) metal ion binding (16.2%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" GYGCTTGVSAFDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.99.12 (100%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (100%) GO:0009231 (20%) GO:0005829 (20%) "GO:0003935 (20%) GO:0008686 (20%) GO:0046872 (20%)" riboflavin biosynthetic process (20%) cytosol (20%) "GTP cyclohydrolase II activity (20%) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (20%) metal ion binding (20%)" "IPR000422 (50%) IPR017945 (50%)" "3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB (50%) DHBP synthase RibB-like alpha/beta domain superfamily (50%)" GENDTGSSEVQIALLTAQINHLQGHFAEHK Morganella morganii Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Morganellaceae Morganella Morganella morganii GO:0006412 (25%) GO:0022627 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000589 (33.3%) IPR005290 (33.3%) IPR009068 (33.3%)" "Small ribosomal subunit protein uS15 (33.3%) Small ribosomal subunit protein uS15, bacteria (33.3%) uS15/NS1, RNA-binding domain superfamily (33.3%)" VVAVGEGALTPEGK Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus GO:0051085 (1.7%) GO:0005737 (15.4%) "GO:0005524 (16.6%) GO:0044183 (16.6%) GO:0046872 (16.6%)" obsolete chaperone cofactor-dependent protein refolding (1.7%) cytoplasm (15.4%) "ATP binding (16.6%) protein folding chaperone (16.6%) metal ion binding (16.6%)" "IPR011032 (25.4%) IPR020818 (25.4%) IPR037124 (25.4%)" "GroES-like superfamily (25.4%) GroES chaperonin family (25.4%) GroES chaperonin superfamily (25.4%)" ITYDEFNTLYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR024492 (100%) CT_309/TC_0583-like (100%) NEVIAEVIALLQSPAK MFDGSSIGGWK root 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (14.4%) GO:0019740 (14.4%) GO:0009314 (0%)" "GO:0005737 (14.4%) GO:0016020 (14.4%) GO:0005829 (0%)" "GO:0004356 (14.4%) GO:0005524 (13.9%) GO:0046872 (13.8%)" "glutamine biosynthetic process (14.4%) nitrogen utilization (14.4%) response to radiation (0%)" "cytoplasm (14.4%) membrane (14.4%) cytosol (0%)" "glutamine synthetase activity (14.4%) ATP binding (13.9%) metal ion binding (13.8%)" "IPR008147 (12.8%) IPR036651 (12.7%) IPR027302 (12.7%)" "Glutamine synthetase, N-terminal domain (12.8%) Glutamine synthetase, N-terminal domain superfamily (12.7%) Glutamine synthetase, N-terminal conserved site (12.7%)" AGGQLVCAGTPEEIAACEASYTGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006289 (12.5%) "GO:0005737 (12.5%) GO:0009380 (12.5%)" "GO:0003677 (12.5%) GO:0004518 (12.5%) GO:0005524 (12.5%)" nucleotide-excision repair (12.5%) "cytoplasm (12.5%) excinuclease repair complex (12.5%)" "DNA binding (12.5%) nuclease activity (12.5%) ATP binding (12.5%)" "IPR003439 (15.3%) IPR004602 (15.3%) IPR017871 (15.3%)" "ABC transporter-like, ATP-binding domain (15.3%) UvrABC system subunit A (15.3%) ABC transporter-like, conserved site (15.3%)" AGMACGSMGPTTAGR Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (19.9%) GO:0005829 (0.3%) "GO:0004333 (19.9%) GO:0042803 (19.9%) GO:0046872 (19.9%)" tricarboxylic acid cycle (19.9%) cytosol (0.3%) "fumarate hydratase activity (19.9%) protein homodimerization activity (19.9%) metal ion binding (19.9%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR020557 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Fumarate lyase, conserved site (16.7%)" SVGTPPAQIVSFDEFEAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR012912 (50%) IPR024047 (50%)" "Plasmid pRiA4b, Orf3-like domain (50%) MM3350-like superfamily (50%)" IISFVNTTENPPVER Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (31.6%) GO:1902600 (31.6%) GO:0006811 (2.2%)" "GO:0005524 (33.8%) GO:0016787 (0.7%)" "ATP metabolic process (31.6%) proton transmembrane transport (31.6%) monoatomic ion transport (2.2%)" "ATP binding (33.8%) hydrolase activity (0.7%)" "IPR000194 (20.4%) IPR022879 (20.4%) IPR027417 (20.4%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.4%) V-type ATP synthase regulatory subunit B/beta (20.4%) P-loop containing nucleoside triphosphate hydrolase (20.4%)" MDEATFVQDWPENN Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033104 (100%) type VI protein secretion system complex (100%) IPR041408 (100%) Hemolysin coregulated protein (Hcp) TssD (100%) TDGVIDKEAQSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.13.1 (100%) exoribonuclease II (100%) GO:0006402 (25%) GO:0005829 (25%) "GO:0003723 (25%) GO:0008859 (25%)" mRNA catabolic process (25%) cytosol (25%) "RNA binding (25%) exoribonuclease II activity (25%)" "IPR001900 (11.1%) IPR003029 (11.1%) IPR004476 (11.1%)" "Ribonuclease II/R (11.1%) S1 domain (11.1%) Ribonuclease II/ribonuclease R (11.1%)" VSLIHVDVNYSDLYTGLIDVNLGDMQKR root GO:0006950 (0.6%) "GO:0005737 (98.4%) GO:0016020 (0.3%)" "GO:0042802 (0.3%) GO:0042803 (0.3%)" response to stress (0.6%) "cytoplasm (98.4%) membrane (0.3%)" "identical protein binding (0.3%) protein homodimerization activity (0.3%)" "IPR014729 (33.8%) IPR006016 (33.7%) IPR006015 (32.5%)" "Rossmann-like alpha/beta/alpha sandwich fold (33.8%) UspA (33.7%) Universal stress protein A family (32.5%)" MTAAGFDIKPTQSAICAVMLYDAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (14.1%) GO:0030148 (14.1%) GO:0006567 (0.4%)" "GO:0005829 (14.4%) GO:0016020 (14.1%)" "GO:0008890 (14.4%) GO:0030170 (14.4%) GO:0004758 (7%)" "L-threonine catabolic process to glycine (14.1%) sphingolipid biosynthetic process (14.1%) L-threonine catabolic process (0.4%)" "cytosol (14.4%) membrane (14.1%)" "glycine C-acetyltransferase activity (14.4%) pyridoxal phosphate binding (14.4%) serine C-palmitoyltransferase activity (7%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" KYDYIVGPSASCVAFVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005829 (51.1%) GO:0016491 (48.9%) cytosol (51.1%) oxidoreductase activity (48.9%) IPR004017 (100%) Cysteine-rich domain (100%) IQMENTTSDYDKEKLQER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" TAEFLWQEGHTAHATREEAEAEAQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.1%) IPR004154 (11.1%) IPR004499 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Anticodon-binding (11.1%) Proline-tRNA ligase, class IIa, archaeal-type (11.1%)" LNEKHYGDLQGLNKSETAAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.2.11 (94.4%) 5.4.2.1 (5.6%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (94.4%) Transferred entry: 5.4.2.11 and 5.4.2.12 (5.6%)" "GO:0006094 (33.3%) GO:0006096 (33.3%)" GO:0004619 (33.3%) "gluconeogenesis (33.3%) glycolytic process (33.3%)" phosphoglycerate mutase activity (33.3%) "IPR001345 (25%) IPR005952 (25%) IPR013078 (25%)" "Phosphoglycerate/bisphosphoglycerate mutase, active site (25%) Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%)" KGEDVVNKNYAAVDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (74%) 1.2.7.- (22%) 1.2.1.51 (4%)" "pyruvate synthase (74%) With an iron-sulfur protein as acceptor (22%) pyruvate dehydrogenase (NADP(+)) (4%)" "GO:0006979 (14.7%) GO:0022900 (14.6%) GO:0044281 (12%)" "GO:0005506 (14.6%) GO:0051539 (14.6%) GO:0030976 (14.4%)" "response to oxidative stress (14.7%) electron transport chain (14.6%) small molecule metabolic process (12%)" "iron ion binding (14.6%) 4 iron, 4 sulfur cluster binding (14.6%) thiamine pyrophosphate binding (14.4%)" "IPR002869 (7.8%) IPR050722 (7.8%) IPR017896 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (7.7%)" VTDAEIAEVLAR root "2.6.1.19 (50%) 3.6.1.15 (50%)" "4-aminobutyrate--2-oxoglutarate transaminase (50%) nucleoside-triphosphate phosphatase (50%)" "GO:0034605 (17%) GO:0042026 (15.7%) GO:0006508 (0.4%)" "GO:0005829 (15.2%) GO:0005737 (1.8%) GO:0005759 (0%)" "GO:0005524 (17.1%) GO:0016887 (17%) GO:0042802 (15.2%)" "cellular response to heat (17%) protein refolding (15.7%) proteolysis (0.4%)" "cytosol (15.2%) cytoplasm (1.8%) mitochondrial matrix (0%)" "ATP binding (17.1%) ATP hydrolysis activity (17%) identical protein binding (15.2%)" "IPR027417 (8.7%) IPR050130 (8.6%) IPR003959 (8.6%)" "P-loop containing nucleoside triphosphate hydrolase (8.7%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%) ATPase, AAA-type, core (8.6%)" MLGLSYGVWAVHQPYNDSRR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (3.8%) "GO:0000287 (19.2%) GO:0004743 (19.2%) GO:0005524 (19.2%)" response to stress (3.8%) "magnesium ion binding (19.2%) pyruvate kinase activity (19.2%) ATP binding (19.2%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" MGVAAIDALLDDQR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0016208 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) AMP binding (9.1%)" "IPR000023 (16.7%) IPR012003 (16.7%) IPR012828 (16.7%)" "Phosphofructokinase domain (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic (16.7%)" HCAGVFDEDPAKYEVGQ Bifidobacterium animalis Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium animalis 3.6.3.4 (100%) Transferred entry: 7.2.2.9 (100%) GO:0055070 (14.3%) GO:0005886 (14.3%) "GO:0005507 (14.3%) GO:0005524 (14.3%) GO:0016491 (14.3%)" copper ion homeostasis (14.3%) plasma membrane (14.3%) "copper ion binding (14.3%) ATP binding (14.3%) oxidoreductase activity (14.3%)" "IPR001757 (6.7%) IPR007029 (6.7%) IPR008250 (6.7%)" "P-type ATPase (6.7%) YHS domain (6.7%) P-type ATPase, A domain superfamily (6.7%)" NVIANPNCTTIQMVVALK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000534 (16.9%) IPR005986 (16.9%) IPR012080 (16.9%)" "Semialdehyde dehydrogenase, NAD-binding (16.9%) Aspartate-semialdehyde dehydrogenase, beta-type (16.9%) Aspartate-semialdehyde dehydrogenase (16.9%)" LNNVPTSPR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR001063 (25%) IPR005727 (25%) IPR036394 (25%)" "Large ribosomal subunit protein uL22 (25%) Large ribosomal subunit protein uL22, bacterial/chloroplast-type (25%) Ribosomal protein uL22 superfamily (25%)" TDSVNLSEYATEGSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.6.2.1 (96.4%) 5.99.1.2 (3.6%)" "DNA topoisomerase (96.4%) Transferred entry: 5.6.2.1 (3.6%)" GO:0006265 (25%) "GO:0003677 (25%) GO:0003917 (25%) GO:0046872 (25%)" DNA topological change (25%) "DNA binding (25%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25%) metal ion binding (25%)" "IPR000380 (7.1%) IPR003601 (7.1%) IPR003602 (7.1%)" "DNA topoisomerase, type IA (7.1%) DNA topoisomerase, type IA, domain 2 (7.1%) DNA topoisomerase, type IA, DNA-binding domain (7.1%)" IGIAAQALGLGEGAVNEAIKYTK AYEAIVKGEPMPQPGIPESLNVLLHELR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (8%) IPR007641 (8%) IPR015712 (8%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (8%) RNA polymerase Rpb2, domain 7 (8%) DNA-directed RNA polymerase, subunit 2 (8%)" TTFKENLAEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR010231 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufB (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" ACDITADMHITAMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.11.9 (95%) 3.4.-.- (5%)" "Xaa-Pro aminopeptidase (95%) Acting on peptide bonds (peptidases) (5%)" GO:0006508 (23.5%) "GO:0005829 (23.5%) GO:0016020 (6.2%)" "GO:0030145 (23.5%) GO:0070006 (23.5%)" proteolysis (23.5%) "cytosol (23.5%) membrane (6.2%)" "manganese ion binding (23.5%) metalloaminopeptidase activity (23.5%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" TMETICGPATPFAENPAAVYAATR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.1%) GO:0006096 (14.1%) GO:0051156 (14.1%)" GO:0005829 (14.1%) "GO:0004347 (14.1%) GO:0048029 (14.1%) GO:0097367 (14.1%)" "gluconeogenesis (14.1%) glycolytic process (14.1%) glucose 6-phosphate metabolic process (14.1%)" cytosol (14.1%) "glucose-6-phosphate isomerase activity (14.1%) monosaccharide binding (14.1%) carbohydrate derivative binding (14.1%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" VMLVDDVITAGTAIR root 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0006207 (16.6%) GO:0046132 (16.6%) GO:0044205 (16.6%)" "GO:0005737 (16.6%) GO:0005829 (0%)" "GO:0004588 (16.6%) GO:0000287 (16.4%) GO:0016757 (0.3%)" "'de novo' pyrimidine nucleobase biosynthetic process (16.6%) pyrimidine ribonucleoside biosynthetic process (16.6%) 'de novo' UMP biosynthetic process (16.6%)" "cytoplasm (16.6%) cytosol (0%)" "orotate phosphoribosyltransferase activity (16.6%) magnesium ion binding (16.4%) glycosyltransferase activity (0.3%)" "IPR000836 (25%) IPR029057 (25%) IPR023031 (25%)" "Phosphoribosyltransferase domain (25%) Phosphoribosyltransferase-like (25%) Orotate phosphoribosyltransferase (25%)" CLIDGLNRIPGVYSPIPMGAFYTVAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.6.1.1 (65.4%) 2.6.1.- (34.6%)" "aspartate transaminase (65.4%) Transaminases (34.6%)" GO:0006520 (33.2%) "GO:0030170 (33.2%) GO:0008483 (28.8%) GO:0004069 (4.7%)" amino acid metabolic process (33.2%) "pyridoxal phosphate binding (33.2%) transaminase activity (28.8%) L-aspartate:2-oxoglutarate aminotransferase activity (4.7%)" "IPR004839 (20.1%) IPR050596 (20.1%) IPR015421 (19.9%)" "Aminotransferase, class I/classII, large domain (20.1%) Aspartate/prephenate aminotransferase-like (20.1%) Pyridoxal phosphate-dependent transferase, major domain (19.9%)" TNCTLVFSVGQALLAAK root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (17.4%) GO:0006098 (15.9%) GO:0042182 (15.9%)" GO:0005737 (17.2%) "GO:0016832 (17.2%) GO:0004801 (16.2%) GO:0016829 (0.1%)" "carbohydrate metabolic process (17.4%) pentose-phosphate shunt (15.9%) ketone catabolic process (15.9%)" cytoplasm (17.2%) "aldehyde-lyase activity (17.2%) transaldolase activity (16.2%) lyase activity (0.1%)" "IPR001585 (17.1%) IPR013785 (17.1%) IPR033919 (16.9%)" "Transaldolase/Fructose-6-phosphate aldolase (17.1%) Aldolase-type TIM barrel (17.1%) Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial (16.9%)" ELPPEERPAAGAVINEAKEQVQQALNAR root 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) "GO:0005737 (16.7%) GO:0005829 (0.1%) GO:0009328 (0.1%)" "GO:0004826 (16.7%) GO:0005524 (16.7%) GO:0000049 (16%)" phenylalanyl-tRNA aminoacylation (16.7%) "cytoplasm (16.7%) cytosol (0.1%) phenylalanine-tRNA ligase complex (0.1%)" "phenylalanine-tRNA ligase activity (16.7%) ATP binding (16.7%) tRNA binding (16%)" "IPR004188 (14.8%) IPR010978 (14.8%) IPR045864 (14.8%)" "Phenylalanine-tRNA ligase, class II, N-terminal (14.8%) Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm (14.8%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.8%)" FCPTGGISPANYR root "4.1.2.14 (53.7%) 4.1.3.42 (42.8%) 4.1.3.16 (3.5%)" "2-dehydro-3-deoxy-phosphogluconate aldolase (53.7%) (4S)-4-hydroxy-2-oxoglutarate aldolase (42.8%) 4-hydroxy-2-oxoglutarate aldolase (3.5%)" "GO:0009255 (0.2%) GO:0009082 (0.1%) GO:0019521 (0.1%)" "GO:0005737 (30.3%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0008700 (27.7%) GO:0008675 (27.4%) GO:0016829 (9.2%)" "Entner-Doudoroff pathway through 6-phosphogluconate (0.2%) branched-chain amino acid biosynthetic process (0.1%) D-gluconate metabolic process (0.1%)" "cytoplasm (30.3%) cytosol (0.1%) membrane (0.1%)" "(R,S)-4-hydroxy-2-oxoglutarate aldolase activity (27.7%) 2-dehydro-3-deoxy-phosphogluconate aldolase activity (27.4%) lyase activity (9.2%)" "IPR000887 (25.2%) IPR013785 (25.2%) IPR031338 (24.9%)" "KDPG/KHG aldolase (25.2%) Aldolase-type TIM barrel (25.2%) KDPG/KHG aldolase, active site 2 (24.9%)" HYGALQGLNKAETAEKYGDEQVKQWR root "5.4.2.11 (99.5%) 5.4.2.- (0.3%) 5.4.2.1 (0.1%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (99.5%) Phosphotransferases (phosphomutases) (0.3%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.1%)" "GO:0006096 (33.1%) GO:0006094 (33%) GO:0061621 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004619 (32.9%) GO:0016853 (0.3%) GO:0016868 (0.3%)" "glycolytic process (33.1%) gluconeogenesis (33%) canonical glycolysis (0%)" "cytoplasm (0%) cytosol (0%)" "phosphoglycerate mutase activity (32.9%) isomerase activity (0.3%) intramolecular phosphotransferase activity (0.3%)" "IPR005952 (25.1%) IPR013078 (25.1%) IPR029033 (25.1%)" "Phosphoglycerate mutase 1 (25.1%) Histidine phosphatase superfamily, clade-1 (25.1%) Histidine phosphatase superfamily (25.1%)" IDRFGVVSPNIQR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006605 (19.5%) GO:0043952 (19.5%) GO:0065002 (19.5%)" GO:0005886 (20.4%) GO:0015450 (20.4%) "protein targeting (19.5%) protein transport by the Sec complex (19.5%) intracellular protein transmembrane transport (19.5%)" plasma membrane (20.4%) protein-transporting ATPase activity (20.4%) "IPR005665 (10%) IPR005791 (10%) IPR022645 (10%)" "Protein-export membrane protein SecF, bacterial (10%) Protein translocase subunit SecD (10%) Protein-export membrane protein SecD/SecF, bacterial (10%)" LISQLYGDREMVANATGCSSIYSGSVPSTPYTTNAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.7.1 (72.7%) 1.2.7.- (27.3%)" "pyruvate synthase (72.7%) With an iron-sulfur protein as acceptor (27.3%)" "GO:0006979 (15.2%) GO:0022900 (15.2%) GO:0044281 (8.9%)" "GO:0005506 (15.2%) GO:0030976 (15.2%) GO:0051539 (15.2%)" "response to oxidative stress (15.2%) electron transport chain (15.2%) small molecule metabolic process (8.9%)" "iron ion binding (15.2%) thiamine pyrophosphate binding (15.2%) 4 iron, 4 sulfur cluster binding (15.2%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" ANYSNPPAHGASVVATILSNDALR root "2.6.1.- (91.6%) 2.6.1.1 (8.1%) 2.6.1.57 (0.3%)" "Transaminases (91.6%) aspartate transaminase (8.1%) aromatic-amino-acid transaminase (0.3%)" "GO:0033585 (16.6%) GO:0009094 (0.1%)" "GO:0005829 (16.6%) GO:0005737 (0.1%)" "GO:0004069 (16.6%) GO:0004838 (16.6%) GO:0030170 (16.6%)" "L-phenylalanine biosynthetic process from chorismate via phenylpyruvate (16.6%) L-phenylalanine biosynthetic process (0.1%)" "cytosol (16.6%) cytoplasm (0.1%)" "L-aspartate:2-oxoglutarate aminotransferase activity (16.6%) L-tyrosine-2-oxoglutarate transaminase activity (16.6%) pyridoxal phosphate binding (16.6%)" "IPR000796 (16.8%) IPR004839 (16.8%) IPR015422 (16.8%)" "Aspartate/other aminotransferase (16.8%) Aminotransferase, class I/classII, large domain (16.8%) Pyridoxal phosphate-dependent transferase, small domain (16.8%)" GIEGQDLNIFSLIQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) GO:0042254 (31%) "GO:0005525 (31%) GO:0043022 (31%) GO:0016787 (6.9%)" ribosome biogenesis (31%) "GTP binding (31%) ribosome binding (31%) hydrolase activity (6.9%)" "IPR005225 (14.3%) IPR006073 (14.3%) IPR015946 (14.3%)" "Small GTP-binding domain (14.3%) GTP binding domain (14.3%) K homology domain-like, alpha/beta (14.3%)" RTYHKESDELIAKK root 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0019563 (16.6%)" "GO:0005829 (16.6%) GO:0016020 (0%)" "GO:0004807 (16.6%) GO:0016853 (0.2%) GO:0042802 (0%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) glycerol catabolic process (16.6%)" "cytosol (16.6%) membrane (0%)" "triose-phosphate isomerase activity (16.6%) isomerase activity (0.2%) identical protein binding (0%)" "IPR000652 (20.2%) IPR013785 (20.2%) IPR035990 (20.2%)" "Triosephosphate isomerase (20.2%) Aldolase-type TIM barrel (20.2%) Triosephosphate isomerase superfamily (20.2%)" FHLPSDMNQVEYFGR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.2%) IPR006101 (7.2%) IPR006103 (7.2%)" "Beta galactosidase small chain/ domain 5 (7.2%) Glycoside hydrolase, family 2 (7.2%) Glycoside hydrolase family 2, catalytic domain (7.2%)" EKHTTKPLMGHFKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.3%)" "GO:0003735 (24.9%) GO:0019843 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.3%)" "structural constituent of ribosome (24.9%) rRNA binding (24.9%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" IPNDLKEVTPEQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (33.3%) GO:0005829 (33.3%) GO:0003677 (33.3%) regulation of DNA-templated transcription (33.3%) cytosol (33.3%) DNA binding (33.3%) "IPR002876 (16.9%) IPR026564 (16.9%) IPR029072 (16.9%)" "Transcriptional regulator TACO1-like (16.9%) Transcriptional regulator TACO1-like, domain 3 (16.9%) YebC-like (16.9%)" LVTDELVIALVK root "2.7.4.3 (99.9%) 2.7.4.- (0.1%)" "adenylate kinase (99.9%) Phosphotransferases with a phosphate group as acceptor (0.1%)" "GO:0044209 (21.1%) GO:0009123 (0.1%) GO:0009132 (0.1%)" "GO:0005737 (25.9%) GO:0005829 (0.1%) GO:0005758 (0%)" "GO:0005524 (26%) GO:0004017 (26%) GO:0016301 (0.3%)" "AMP salvage (21.1%) nucleoside monophosphate metabolic process (0.1%) nucleoside diphosphate metabolic process (0.1%)" "cytoplasm (25.9%) cytosol (0.1%) mitochondrial intermembrane space (0%)" "ATP binding (26%) AMP kinase activity (26%) kinase activity (0.3%)" "IPR000850 (20.2%) IPR027417 (20.1%) IPR033690 (20.1%)" "Adenylate kinase/UMP-CMP kinase (20.2%) P-loop containing nucleoside triphosphate hydrolase (20.1%) Adenylate kinase, conserved site (20.1%)" HVGISAEDIPAMLETIGVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" AQAEAAVNAFQDVFVEAMQSGEGLKLTGLFSAER Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0030261 (24%) GO:0005829 (25.3%) "GO:0003677 (25.3%) GO:0030527 (25.3%)" chromosome condensation (24%) cytosol (25.3%) "DNA binding (25.3%) structural constituent of chromatin (25.3%)" "IPR000119 (50%) IPR010992 (50%)" "Histone-like DNA-binding protein (50%) Integration host factor (IHF)-like DNA-binding domain superfamily (50%)" KGGDIKDFANLKDK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006865 (21.7%) GO:0015813 (4.3%) GO:0070778 (4.3%)" "GO:0005576 (21.7%) GO:0030288 (21.7%) GO:0016020 (4.3%)" "GO:0016595 (4.3%) GO:0070335 (4.3%)" "amino acid transport (21.7%) L-glutamate transmembrane transport (4.3%) L-aspartate transmembrane transport (4.3%)" "extracellular region (21.7%) outer membrane-bounded periplasmic space (21.7%) membrane (4.3%)" "glutamate binding (4.3%) aspartate binding (4.3%)" "IPR001638 (50%) IPR051455 (50%)" "Solute-binding protein family 3/N-terminal domain of MltF (50%) Bacterial solute-binding protein 3 (50%)" GKHVGVLQGSTQEAYANETWR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (46.7%) GO:0006995 (0.4%) GO:0009267 (0.4%)" "GO:0030288 (47.6%) GO:0030313 (1.3%) GO:0016020 (0.4%)" "GO:0016597 (0.4%) GO:0016787 (0.4%)" "amino acid transport (46.7%) cellular response to nitrogen starvation (0.4%) cellular response to starvation (0.4%)" "outer membrane-bounded periplasmic space (47.6%) cell envelope (1.3%) membrane (0.4%)" "amino acid binding (0.4%) hydrolase activity (0.4%)" "IPR001638 (34.7%) IPR018313 (32.8%) IPR005768 (32.5%)" "Solute-binding protein family 3/N-terminal domain of MltF (34.7%) Solute-binding protein family 3, conserved site (32.8%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (32.5%)" VKEAPAAPAAQAPVKPAQPAQAPTEKKEEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.3%) IPR000795 (8.3%) IPR004161 (8.3%)" "Translation initiation factor IF-2, bacterial-like (8.3%) Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" VVLEMSPYDLNR Bacteria Bacteria GO:0005829 (25%) "GO:0003743 (25.1%) GO:0043022 (25%) GO:0019843 (24.6%)" cytosol (25%) "translation initiation factor activity (25.1%) ribosome binding (25%) rRNA binding (24.6%)" "IPR004368 (33.3%) IPR006196 (33.3%) IPR012340 (33.3%)" "Translation initiation factor IF-1 (33.3%) RNA-binding domain, S1, IF1 type (33.3%) Nucleic acid-binding, OB-fold (33.3%)" IDYAEVPATSIPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR011990 (41.7%) IPR041662 (33.3%) IPR024302 (25%)" "Tetratricopeptide-like helical domain superfamily (41.7%) SusD-like 2 (33.3%) SusD-like (25%)" SAVAAIEAVGGNAVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25.5%) "GO:0022625 (24.5%) GO:0005840 (0.9%) GO:1990904 (0.9%)" "GO:0003735 (25.5%) GO:0019843 (22.6%)" translation (25.5%) "cytosolic large ribosomal subunit (24.5%) ribosome (0.9%) ribonucleoprotein complex (0.9%)" "structural constituent of ribosome (25.5%) rRNA binding (22.6%)" "IPR001196 (20.6%) IPR021131 (20.6%) IPR036227 (20.6%)" "Large ribosomal subunit protein uL15, conserved site (20.6%) Large ribosomal subunit protein uL15/eL18 (20.6%) Large ribosomal subunit protein uL15/eL18 superfamily (20.6%)" WMEEHMFPFYPLGDLKDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.7.1 (44.4%) 1.2.7.3 (33.3%) 1.2.-.- (22.2%)" "pyruvate synthase (44.4%) 2-oxoglutarate synthase (33.3%) Acting on the aldehyde or oxo group of donors (22.2%)" GO:0044281 (30.5%) "GO:0030976 (34.5%) GO:0016625 (30.5%) GO:0019164 (2.5%)" small molecule metabolic process (30.5%) "thiamine pyrophosphate binding (34.5%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (30.5%) pyruvate synthase activity (2.5%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" TGDQICTLGHEFGSVTGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.6%) GO:0046040 (16.6%)" GO:0005737 (16.6%) "GO:0000287 (16.6%) GO:0004019 (16.6%) GO:0005525 (16.6%)" "'de novo' AMP biosynthetic process (16.6%) IMP metabolic process (16.6%)" cytoplasm (16.6%) "magnesium ion binding (16.6%) adenylosuccinate synthase activity (16.6%) GTP binding (16.6%)" "IPR001114 (14.3%) IPR018220 (14.3%) IPR027417 (14.3%)" "Adenylosuccinate synthetase (14.3%) Adenylosuccinate synthase, GTP-binding site (14.3%) P-loop containing nucleoside triphosphate hydrolase (14.3%)" MKTFELEGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" TVAKVDEAAEALKQIAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25.1%) IPR005706 (25.1%) IPR023591 (25.1%)" "Small ribosomal subunit protein uS2 (25.1%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.1%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.1%)" GGIILLGKDFENPWGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.4%) GO:0035999 (15.4%) GO:0032259 (10.7%)" GO:0005829 (15.4%) "GO:0004372 (15.4%) GO:0030170 (15.4%) GO:0008168 (10.7%)" "glycine biosynthetic process from serine (15.4%) tetrahydrofolate interconversion (15.4%) methylation (10.7%)" cytosol (15.4%) "glycine hydroxymethyltransferase activity (15.4%) pyridoxal phosphate binding (15.4%) methyltransferase activity (10.7%)" "IPR001085 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Serine hydroxymethyltransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" LSSPATLNSR Sarcopterygii Eukaryota Metazoa Chordata Craniata Sarcopterygii 3.4.21.4 (100%) trypsin (100%) "GO:0006508 (25%) GO:0007586 (24.3%)" "GO:0005615 (21.2%) GO:0005576 (3.1%) GO:0016020 (0.7%)" "GO:0004252 (25%) GO:0046872 (0.7%)" "proteolysis (25%) digestion (24.3%)" "extracellular space (21.2%) extracellular region (3.1%) membrane (0.7%)" "serine-type endopeptidase activity (25%) metal ion binding (0.7%)" "IPR001254 (14.8%) IPR009003 (14.8%) IPR043504 (14.8%)" "Serine proteases, trypsin domain (14.8%) Peptidase S1, PA clan (14.8%) Peptidase S1, PA clan, chymotrypsin-like fold (14.8%)" VLNPDTDEPYGPR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" AVNAFGDTKTNSAALAQILAKDYNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (47.1%) IPR019734 (47.1%) IPR013105 (5.9%)" "Tetratricopeptide-like helical domain superfamily (47.1%) Tetratricopeptide repeat (47.1%) Tetratricopeptide repeat 2 (5.9%)" NAYYITDGKGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) KVVAEGNTPCPVTADGQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25.1%) GO:0009341 (25.1%) "GO:0004565 (25.1%) GO:0030246 (24.6%)" lactose catabolic process (25.1%) beta-galactosidase complex (25.1%) "beta-galactosidase activity (25.1%) carbohydrate binding (24.6%)" "IPR006101 (7.2%) IPR006102 (7.2%) IPR006103 (7.2%)" "Glycoside hydrolase, family 2 (7.2%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.2%) Glycoside hydrolase family 2, catalytic domain (7.2%)" HQNVGFEAIDPAAGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.2%) IPR006101 (7.2%) IPR006103 (7.2%)" "Beta galactosidase small chain/ domain 5 (7.2%) Glycoside hydrolase, family 2 (7.2%) Glycoside hydrolase family 2, catalytic domain (7.2%)" VMGGGFGGCTINLVK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20.1%) GO:0005829 (20.1%) "GO:0004335 (20.1%) GO:0005524 (20.1%) GO:0046872 (19.6%)" galactose metabolic process (20.1%) cytosol (20.1%) "galactokinase activity (20.1%) ATP binding (20.1%) metal ion binding (19.6%)" "IPR013750 (10.3%) IPR036554 (10.2%) IPR000705 (10%)" "GHMP kinase, C-terminal domain (10.3%) GHMP kinase, C-terminal domain superfamily (10.2%) Galactokinase (10%)" VVKDNLFPVPPLFR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.3.1 (100%) phosphoribosylformylglycinamidine cyclo-ligase (100%) "GO:0006189 (16.7%) GO:0046084 (16.7%)" GO:0005829 (16.7%) "GO:0004637 (16.7%) GO:0004641 (16.7%) GO:0005524 (16.7%)" "'de novo' IMP biosynthetic process (16.7%) adenine biosynthetic process (16.7%)" cytosol (16.7%) "phosphoribosylamine-glycine ligase activity (16.7%) phosphoribosylformylglycinamidine cyclo-ligase activity (16.7%) ATP binding (16.7%)" "IPR004733 (20%) IPR010918 (20%) IPR016188 (20%)" "Phosphoribosylformylglycinamidine cyclo-ligase (20%) PurM-like, C-terminal domain (20%) PurM-like, N-terminal domain (20%)" MNMYVGNLNYR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0003723 (100%) RNA binding (100%) "IPR000504 (24.5%) IPR012677 (24.5%) IPR035979 (24.5%)" "RNA recognition motif domain (24.5%) Nucleotide-binding alpha-beta plait domain superfamily (24.5%) RNA-binding domain superfamily (24.5%)" NMLRDEADQMSCVLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (50%) GO:0016149 (50%) cytoplasm (50%) translation release factor activity, codon specific (50%) "IPR000352 (25%) IPR004374 (25%) IPR005139 (25%)" "Peptide chain release factor class I (25%) Peptide chain release factor 2 (25%) Peptide chain release factor (25%)" LLDTVTLDEHGER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.99.17 (100%) phosphomethylpyrimidine synthase (100%) "GO:0009228 (16.7%) GO:0009229 (16.7%)" GO:0005829 (16.7%) "GO:0008270 (16.7%) GO:0051539 (16.7%) GO:0070284 (11.1%)" "thiamine biosynthetic process (16.7%) thiamine diphosphate biosynthetic process (16.7%)" cytosol (16.7%) "zinc ion binding (16.7%) 4 iron, 4 sulfur cluster binding (16.7%) phosphomethylpyrimidine synthase activity (11.1%)" "IPR002817 (25%) IPR025747 (25%) IPR037509 (25%)" "Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B (25%) ThiC-associated domain (25%) Phosphomethylpyrimidine synthase (25%)" VLVPNGEFFAEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR003489 (50%) IPR036567 (50%)" "Ribosome hibernation promoting factor/RaiA (50%) Ribosome hibernation promotion factor-like (50%)" ILDEGEAGDNVGLLLR Bacteria Bacteria 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (15.1%) GO:0032045 (10%) GO:0005737 (1.3%)" "GO:0003746 (16.4%) GO:0003924 (16.4%) GO:0005525 (16.4%)" "cytosol (15.1%) guanyl-nucleotide exchange factor complex (10%) cytoplasm (1.3%)" "translation elongation factor activity (16.4%) GTPase activity (16.4%) GTP binding (16.4%)" "IPR000795 (8.5%) IPR004161 (8.5%) IPR009000 (8.5%)" "Translational (tr)-type GTP-binding domain (8.5%) Translation elongation factor EFTu-like, domain 2 (8.5%) Translation protein, beta-barrel domain superfamily (8.5%)" NYAAVDRGGEYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (76.2%) 1.2.7.- (19%) 1.2.1.51 (4.8%)" "pyruvate synthase (76.2%) With an iron-sulfur protein as acceptor (19%) pyruvate dehydrogenase (NADP(+)) (4.8%)" "GO:0006979 (14.8%) GO:0022900 (14.6%) GO:0044281 (11.6%)" "GO:0051539 (14.7%) GO:0005506 (14.6%) GO:0030976 (14.4%)" "response to oxidative stress (14.8%) electron transport chain (14.6%) small molecule metabolic process (11.6%)" "4 iron, 4 sulfur cluster binding (14.7%) iron ion binding (14.6%) thiamine pyrophosphate binding (14.4%)" "IPR002869 (7.8%) IPR050722 (7.8%) IPR017896 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (7.7%)" VINGLGIAIISTSK root GO:0006412 (16.8%) "GO:0005840 (16.8%) GO:1990904 (16.8%) GO:0005737 (16.4%)" "GO:0003735 (16.8%) GO:0019843 (16.2%)" translation (16.8%) "ribosome (16.8%) ribonucleoprotein complex (16.8%) cytoplasm (16.4%)" "structural constituent of ribosome (16.8%) rRNA binding (16.2%)" "IPR000630 (34.4%) IPR035987 (34.3%) IPR047863 (31.4%)" "Small ribosomal subunit protein uS8 (34.4%) Small ribosomal subunit protein uS8 superfamily (34.3%) Small ribosomal subunit protein uS8, conserved site (31.4%)" EQFKQYVETR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005886 (50.5%) "GO:0003755 (43.1%) GO:0016853 (6.4%)" plasma membrane (50.5%) "peptidyl-prolyl cis-trans isomerase activity (43.1%) isomerase activity (6.4%)" "IPR027304 (35%) IPR052029 (35%) IPR046357 (30%)" "Trigger factor/SurA domain superfamily (35%) Periplasmic chaperone PpiD (35%) Peptidyl-prolyl cis-trans isomerase domain superfamily (30%)" KVYEETGISENDIAKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.6%) "GO:0005829 (16.6%) GO:0005960 (16.6%)" "GO:0004375 (16.6%) GO:0016594 (16.6%) GO:0030170 (16.6%)" glycine decarboxylation via glycine cleavage system (16.6%) "cytosol (16.6%) glycine cleavage complex (16.6%)" "glycine dehydrogenase (decarboxylating) activity (16.6%) glycine binding (16.6%) pyridoxal phosphate binding (16.6%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" VVDRDEVEPEHFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.14 (100%) L-rhamnose isomerase (100%) "GO:0019301 (20%) GO:0019324 (20%)" GO:0005737 (20%) "GO:0008740 (20%) GO:0030145 (20%)" "rhamnose catabolic process (20%) L-lyxose metabolic process (20%)" cytoplasm (20%) "L-rhamnose isomerase activity (20%) manganese ion binding (20%)" "IPR009308 (33.3%) IPR036237 (33.3%) IPR050337 (33.3%)" "Rhamnose isomerase (33.3%) Xylose isomerase-like superfamily (33.3%) L-rhamnose isomerase (33.3%)" SSAIFFGLSGTGK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.3%) GO:0005829 (17.3%) "GO:0004612 (17.3%) GO:0005524 (17.3%) GO:0046872 (17%)" gluconeogenesis (17.3%) cytosol (17.3%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.3%) ATP binding (17.3%) metal ion binding (17%)" "IPR001272 (25.1%) IPR008210 (25.1%) IPR013035 (25.1%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.1%) Phosphoenolpyruvate carboxykinase, N-terminal (25.1%) Phosphoenolpyruvate carboxykinase, C-terminal (25.1%)" VLILPAPAEEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0051085 (0.6%) GO:0005737 (15.9%) "GO:0005524 (16.7%) GO:0044183 (16.7%) GO:0046872 (16.7%)" obsolete chaperone cofactor-dependent protein refolding (0.6%) cytoplasm (15.9%) "ATP binding (16.7%) protein folding chaperone (16.7%) metal ion binding (16.7%)" "IPR011032 (33.3%) IPR020818 (33.3%) IPR037124 (33.3%)" "GroES-like superfamily (33.3%) GroES chaperonin family (33.3%) GroES chaperonin superfamily (33.3%)" GFAWLDTGTHDSLAEASTYIEVIEKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.24 (100%) glucose-1-phosphate thymidylyltransferase (100%) "GO:0008879 (50.9%) GO:0046872 (49.1%)" "glucose-1-phosphate thymidylyltransferase activity (50.9%) metal ion binding (49.1%)" "IPR005835 (33.3%) IPR005907 (33.3%) IPR029044 (33.3%)" "Nucleotidyl transferase domain (33.3%) Glucose-1-phosphate thymidylyltransferase, short form (33.3%) Nucleotide-diphospho-sugar transferases (33.3%)" QAQYNFVGASEQLESAHR root "GO:0046677 (19.3%) GO:0009410 (0%) GO:0009636 (0%)" "GO:1990281 (20.1%) GO:0009279 (20%) GO:0019867 (0.1%)" "GO:0015288 (20.1%) GO:0015562 (20.1%) GO:0005216 (0%)" "response to antibiotic (19.3%) response to xenobiotic stimulus (0%) response to toxic substance (0%)" "efflux pump complex (20.1%) cell outer membrane (20%) outer membrane (0.1%)" "porin activity (20.1%) efflux transmembrane transporter activity (20.1%) monoatomic ion channel activity (0%)" "IPR003423 (33.6%) IPR051906 (33.6%) IPR010130 (32.8%)" "Outer membrane efflux protein (33.6%) Outer membrane protein TolC-like (33.6%) Type I secretion outer membrane protein, TolC (32.8%)" SRTNFDTLLEAGCHFGHLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33%) "GO:0022627 (33%) GO:0005840 (1%)" GO:0003735 (33%) translation (33%) "cytosolic small ribosomal subunit (33%) ribosome (1%)" structural constituent of ribosome (33%) "IPR001865 (25.1%) IPR005706 (25.1%) IPR023591 (25.1%)" "Small ribosomal subunit protein uS2 (25.1%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.1%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.1%)" GATGLGLKEAK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006412 (24.9%) GO:0002181 (0%) GO:0006351 (0%)" "GO:0022625 (24.8%) GO:0005840 (0.3%) GO:0005737 (0%)" "GO:0003735 (24.9%) GO:0003729 (24.8%) GO:0003677 (0%)" "translation (24.9%) cytoplasmic translation (0%) DNA-templated transcription (0%)" "cytosolic large ribosomal subunit (24.8%) ribosome (0.3%) cytoplasm (0%)" "structural constituent of ribosome (24.9%) mRNA binding (24.8%) DNA binding (0%)" "IPR000206 (20%) IPR013823 (20%) IPR014719 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, C-terminal (20%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20%)" TKNNPVLIGEPGVGK root "3.4.21.92 (72.7%) 3.4.-.- (18.2%) 3.4.21.- (9.1%)" "endopeptidase Clp (72.7%) Acting on peptide bonds (peptidases) (18.2%) Serine endopeptidases (9.1%)" "GO:0034605 (18%) GO:0042026 (12.7%) GO:0006508 (5.1%)" "GO:0005737 (14.5%) GO:0005829 (3.3%) GO:0009507 (0.4%)" "GO:0005524 (18.3%) GO:0016887 (18.2%) GO:0008233 (5.1%)" "cellular response to heat (18%) protein refolding (12.7%) proteolysis (5.1%)" "cytoplasm (14.5%) cytosol (3.3%) chloroplast (0.4%)" "ATP binding (18.3%) ATP hydrolysis activity (18.2%) peptidase activity (5.1%)" "IPR050130 (8.6%) IPR027417 (8.6%) IPR003959 (8.5%)" "ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%) P-loop containing nucleoside triphosphate hydrolase (8.6%) ATPase, AAA-type, core (8.5%)" SGTLTYEIVSHLTAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.2.1.5 (95.7%) 6.2.1.- (4.3%)" "succinate--CoA ligase (ADP-forming) (95.7%) Acid--thiol ligases (4.3%)" GO:0006099 (20%) GO:0009361 (20%) "GO:0000166 (20%) GO:0004775 (20%) GO:0004776 (20%)" tricarboxylic acid cycle (20%) succinate-CoA ligase complex (ADP-forming) (20%) "nucleotide binding (20%) succinate-CoA ligase (ADP-forming) activity (20%) succinate-CoA ligase (GDP-forming) activity (20%)" "IPR003781 (14.3%) IPR005810 (14.3%) IPR005811 (14.3%)" "CoA-binding (14.3%) Succinyl-CoA ligase, alpha subunit (14.3%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.3%)" AKVTEKETTFNELMNQQA Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.7%) GO:0051301 (12.1%) GO:0043335 (11.4%)" "GO:0005737 (11.8%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0003755 (12.6%) GO:0043022 (11.4%) GO:0044183 (11.4%)" "protein transport (12.7%) cell division (12.1%) protein unfolding (11.4%)" "cytoplasm (11.8%) cytosol (0.1%) membrane (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (12.6%) ribosome binding (11.4%) protein folding chaperone (11.4%)" "IPR027304 (13.2%) IPR037041 (13.2%) IPR008880 (12.9%)" "Trigger factor/SurA domain superfamily (13.2%) Trigger factor, C-terminal domain superfamily (13.2%) Trigger factor, C-terminal (12.9%)" AKGYASNAANFEDTAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) "GO:0006633 (30.7%) GO:0030497 (2.2%)" "GO:0004316 (33%) GO:0051287 (33%) GO:0048038 (1.1%)" "fatty acid biosynthetic process (30.7%) fatty acid elongation (2.2%)" "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33%) NAD binding (33%) quinone binding (1.1%)" "IPR002347 (17%) IPR011284 (17%) IPR020904 (17%)" "Short-chain dehydrogenase/reductase SDR (17%) 3-oxoacyl-(acyl-carrier-protein) reductase (17%) Short-chain dehydrogenase/reductase, conserved site (17%)" DGIDYHAAADLTGQANR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (48.7%) "GO:0004332 (48.7%) GO:0016829 (2.6%)" glycolytic process (48.7%) "fructose-bisphosphate aldolase activity (48.7%) lyase activity (2.6%)" "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" ALFSNPVEAQDAFDAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR027304 (33.3%) IPR046357 (33.3%) IPR052029 (33.3%)" "Trigger factor/SurA domain superfamily (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) Periplasmic chaperone PpiD (33.3%)" GFSHVLKIYSGGLGILAGDYLK HLKPNAIVLIDTDSFKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.7.11 (50%) 1.2.7.3 (50%)" "2-oxoacid oxidoreductase (ferredoxin) (50%) 2-oxoglutarate synthase (50%)" GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.5%) IPR002880 (12.5%) IPR009014 (12.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" WAYVVGAAIAIKK Bacteria Bacteria IPR025964 (100%) GGGtGRT protein (100%) VIGMGGALDSSR Pseudomonadati Bacteria Pseudomonadati 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (26.1%) GO:0006099 (24.2%)" "GO:0004459 (26.1%) GO:0030060 (23.7%)" "lactate metabolic process (26.1%) tricarboxylic acid cycle (24.2%)" "L-lactate dehydrogenase (NAD+) activity (26.1%) L-malate dehydrogenase (NAD+) activity (23.7%)" "IPR001236 (16.8%) IPR015955 (16.8%) IPR022383 (16.8%)" "Lactate/malate dehydrogenase, N-terminal (16.8%) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (16.8%) Lactate/malate dehydrogenase, C-terminal (16.8%)" MAETDEPAFEDLHPIGTIGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.21.53 (100%) endopeptidase La (100%) "GO:0006515 (12.5%) GO:0034605 (12.5%)" GO:0005737 (12.5%) "GO:0004176 (12.5%) GO:0004252 (12.5%) GO:0005524 (12.5%)" "protein quality control for misfolded or incompletely synthesized proteins (12.5%) cellular response to heat (12.5%)" cytoplasm (12.5%) "ATP-dependent peptidase activity (12.5%) serine-type endopeptidase activity (12.5%) ATP binding (12.5%)" "IPR003111 (7.1%) IPR003593 (7.1%) IPR003959 (7.1%)" "Lon protease, N-terminal domain (7.1%) AAA+ ATPase domain (7.1%) ATPase, AAA-type, core (7.1%)" YGNEVADNCTILYGGSCNAGNAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" AKGNDVVIVDTAGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) GO:0048500 (20%) "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (20%)" SRP-dependent cotranslational protein targeting to membrane (20%) signal recognition particle (20%) "GTPase activity (20%) GTP binding (20%) 7S RNA binding (20%)" "IPR000897 (11.1%) IPR003593 (11.1%) IPR004125 (11.1%)" "Signal recognition particle, SRP54 subunit, GTPase domain (11.1%) AAA+ ATPase domain (11.1%) Signal recognition particle, SRP54 subunit, M-domain (11.1%)" IDEDWKPSSMFWEVTNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) "GO:0005978 (19.7%) GO:0005975 (0.5%)" "GO:0005737 (20.1%) GO:0016020 (0.1%)" "GO:0003844 (20.1%) GO:0004553 (19.7%) GO:0043169 (19.7%)" "glycogen biosynthetic process (19.7%) carbohydrate metabolic process (0.5%)" "cytoplasm (20.1%) membrane (0.1%)" "1,4-alpha-glucan branching enzyme activity (20.1%) hydrolase activity, hydrolyzing O-glycosyl compounds (19.7%) cation binding (19.7%)" "IPR017853 (12.7%) IPR006047 (12.5%) IPR004193 (12.5%)" "Glycoside hydrolase superfamily (12.7%) Glycosyl hydrolase family 13, catalytic domain (12.5%) Glycoside hydrolase, family 13, N-terminal (12.5%)" WSAIAAMDENDPLTLITEAVYAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.44 (96.9%) 1.1.1.343 (3.1%)" "phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (96.9%) phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) (3.1%)" "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" AILAAAGIAEDVKISELSEGQIDTLRDEVAK Bacteria Bacteria "GO:0006412 (16.3%) GO:0000028 (0.2%) GO:0002181 (0.2%)" "GO:0005829 (16.1%) GO:0015935 (16.1%) GO:0005840 (1.4%)" "GO:0003735 (16.5%) GO:0019843 (16.3%) GO:0000049 (15.9%)" "translation (16.3%) ribosomal small subunit assembly (0.2%) cytoplasmic translation (0.2%)" "cytosol (16.1%) small ribosomal subunit (16.1%) ribosome (1.4%)" "structural constituent of ribosome (16.5%) rRNA binding (16.3%) tRNA binding (15.9%)" "IPR001892 (20.2%) IPR010979 (20.2%) IPR027437 (20%)" "Small ribosomal subunit protein uS13 (20.2%) Small ribosomal subunit protein uS13-like, H2TH (20.2%) Small ribosomal subunit protein uS13, C-terminal (20%)" ESDFFEQPALVYDIVKDDVPTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR002625 (25%) IPR018598 (25%) IPR036063 (25%)" "Smr domain (25%) Domain of unknown function DUF2027 (25%) Smr domain superfamily (25%)" TAEAIENFAGMGLSILEISHR Parabacteroides faecalis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides faecalis 2.6.1.52 (100%) phosphoserine transaminase (100%) FAFYDDLNTACVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" IWDSTDALELKEVPER root 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) "GO:0006103 (20.3%) GO:0006979 (17.9%) GO:0006090 (0.2%)" "GO:0005737 (18.3%) GO:0005829 (0.2%) GO:0005886 (0.2%)" "GO:0004148 (20.3%) GO:0050660 (20.3%) GO:0016491 (0.5%)" "2-oxoglutarate metabolic process (20.3%) response to oxidative stress (17.9%) pyruvate metabolic process (0.2%)" "cytoplasm (18.3%) cytosol (0.2%) plasma membrane (0.2%)" "dihydrolipoyl dehydrogenase (NADH) activity (20.3%) flavin adenine dinucleotide binding (20.3%) oxidoreductase activity (0.5%)" "IPR023753 (13.2%) IPR036188 (13.2%) IPR050151 (13.2%)" "FAD/NAD(P)-binding domain (13.2%) FAD/NAD(P)-binding domain superfamily (13.2%) Class-I pyridine nucleotide-disulfide oxidoreductase (13.2%)" VGFFNPIASEKEEGTR root "GO:0006412 (24.6%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0005737 (24.6%) GO:0015935 (24.6%) GO:0005840 (0.5%)" "GO:0003735 (24.8%) GO:0004519 (0.3%) GO:0000400 (0.1%)" "translation (24.6%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytoplasm (24.6%) small ribosomal subunit (24.6%) ribosome (0.5%)" "structural constituent of ribosome (24.8%) endonuclease activity (0.3%) four-way junction DNA binding (0.1%)" "IPR000307 (33.4%) IPR023803 (33.4%) IPR020592 (33.2%)" "Small ribosomal subunit protein bS16 (33.4%) Small ribosomal subunit protein bS16 domain superfamily (33.4%) Small ribosomal subunit protein bS16, conserved site (33.2%)" YCDDINKVEVSLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR003489 (50%) IPR036567 (50%)" "Ribosome hibernation promoting factor/RaiA (50%) Ribosome hibernation promotion factor-like (50%)" YVDGVEMDNQAQYKAEAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" EYTKENMPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR013022 (33.3%) IPR036237 (33.3%) IPR050312 (33.3%)" "Xylose isomerase-like, TIM barrel domain (33.3%) Xylose isomerase-like superfamily (33.3%) IolE/XylA/MocC-like (33.3%)" NVGENALAISR root "2.7.7.23 (51.4%) 2.3.1.157 (48.6%)" "UDP-N-acetylglucosamine diphosphorylase (51.4%) glucosamine-1-phosphate N-acetyltransferase (48.6%)" "GO:0008360 (9.3%) GO:0071555 (9.3%) GO:0009252 (9.3%)" "GO:0005737 (9.3%) GO:0016020 (8.3%) GO:0005829 (0.1%)" "GO:0003977 (9.3%) GO:0019134 (9.3%) GO:0000287 (8.7%)" "regulation of cell shape (9.3%) cell wall organization (9.3%) peptidoglycan biosynthetic process (9.3%)" "cytoplasm (9.3%) membrane (8.3%) cytosol (0.1%)" "UDP-N-acetylglucosamine diphosphorylase activity (9.3%) glucosamine-1-phosphate N-acetyltransferase activity (9.3%) magnesium ion binding (8.7%)" "IPR011004 (13%) IPR018357 (13%) IPR001451 (12.9%)" "Trimeric LpxA-like superfamily (13%) Hexapeptide transferase, conserved site (13%) Hexapeptide repeat (12.9%)" VTCEYQLER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" DLPILCNQWANVMR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%) GO:0016020 (0.2%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%) membrane (0.2%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.4%) IPR004499 (11.4%) IPR006195 (11.4%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.4%) Proline-tRNA ligase, class IIa, archaeal-type (11.4%) Aminoacyl-tRNA synthetase, class II (11.4%)" AKATLSAIKNPDAMTDYLMAIVGAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" DKDGKLSITKEPNGSNPVVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0004784 (50%) GO:0046872 (50%)" "superoxide dismutase activity (50%) metal ion binding (50%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" SALEVAMTVLHAGGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.6.2.2 (98.4%) 5.99.1.3 (1.6%)" "DNA topoisomerase (ATP-hydrolyzing) (98.4%) Transferred entry: 5.6.2.2 (1.6%)" "GO:0006265 (13.2%) GO:0006261 (11.4%) GO:0032259 (0.2%)" "GO:0005694 (11.4%) GO:0005737 (11.4%)" "GO:0003677 (13.2%) GO:0005524 (13.2%) GO:0046872 (12.5%)" "DNA topological change (13.2%) DNA-templated DNA replication (11.4%) methylation (0.2%)" "chromosome (11.4%) cytoplasm (11.4%)" "DNA binding (13.2%) ATP binding (13.2%) metal ion binding (12.5%)" "IPR000565 (7.5%) IPR001241 (7.5%) IPR003594 (7.5%)" "DNA topoisomerase, type IIA, subunit B (7.5%) DNA topoisomerase, type IIA (7.5%) Histidine kinase/HSP90-like ATPase domain (7.5%)" DPANWDPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25%) GO:0044205 (25%)" "GO:0000287 (25%) GO:0004588 (25%)" "pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" "magnesium ion binding (25%) orotate phosphoribosyltransferase activity (25%)" "IPR000836 (25%) IPR004467 (25%) IPR023031 (25%)" "Phosphoribosyltransferase domain (25%) Orotate phosphoribosyl transferase domain (25%) Orotate phosphoribosyltransferase (25%)" IEAALADKEAELMQF root "GO:0002184 (32.9%) GO:0006412 (0.4%)" "GO:0005829 (32.9%) GO:0005737 (0.4%)" "GO:0043023 (32.9%) GO:0003746 (0.4%)" "cytoplasmic translational termination (32.9%) translation (0.4%)" "cytosol (32.9%) cytoplasm (0.4%)" "ribosomal large subunit binding (32.9%) translation elongation factor activity (0.4%)" "IPR023584 (33.5%) IPR036191 (33.5%) IPR002661 (33.1%)" "Ribosome recycling factor domain (33.5%) RRF superfamily (33.5%) Ribosome recycling factor (33.1%)" TMSQQVVMDGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.1.1.22 (95.5%) 1.1.1.- (4.5%)" "UDP-glucose 6-dehydrogenase (95.5%) With NAD(+) or NADP(+) as acceptor (4.5%)" "GO:0000271 (26.3%) GO:0006065 (21.1%)" "GO:0003979 (26.3%) GO:0051287 (26.3%)" "polysaccharide biosynthetic process (26.3%) UDP-glucuronate biosynthetic process (21.1%)" "UDP-glucose 6-dehydrogenase activity (26.3%) NAD binding (26.3%)" "IPR001732 (12.5%) IPR008927 (12.5%) IPR014026 (12.5%)" "UDP-glucose/GDP-mannose dehydrogenase, N-terminal (12.5%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (12.5%) UDP-glucose/GDP-mannose dehydrogenase, dimerisation (12.5%)" NIPLPYPEAQAFECK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.15.5 (100%) peptidyl-dipeptidase Dcp (100%) GO:0006508 (18.6%) GO:0005829 (18.6%) "GO:0004180 (18.6%) GO:0004222 (18.6%) GO:0046872 (18.6%)" proteolysis (18.6%) cytosol (18.6%) "carboxypeptidase activity (18.6%) metalloendopeptidase activity (18.6%) metal ion binding (18.6%)" "IPR001567 (16.7%) IPR024077 (16.7%) IPR024079 (16.7%)" "Peptidase M3A/M3B catalytic domain (16.7%) Neurolysin/Thimet oligopeptidase, domain 2 (16.7%) Metallopeptidase, catalytic domain superfamily (16.7%)" AIASATELPIVLYNVPGR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.3.3.7 (100%) 4-hydroxy-tetrahydrodipicolinate synthase (100%) "GO:0009089 (20.3%) GO:0019877 (20.3%)" "GO:0005829 (20.3%) GO:0016020 (18.8%)" GO:0008840 (20.3%) "lysine biosynthetic process via diaminopimelate (20.3%) diaminopimelate biosynthetic process (20.3%)" "cytosol (20.3%) membrane (18.8%)" 4-hydroxy-tetrahydrodipicolinate synthase activity (20.3%) "IPR002220 (25%) IPR005263 (25%) IPR013785 (25%)" "DapA-like (25%) 4-hydroxy-tetrahydrodipicolinate synthase, DapA (25%) Aldolase-type TIM barrel (25%)" EIICYLPDGTSQTCSLSEASDSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006207 (16.2%) GO:0006526 (16.2%) GO:0006541 (16.2%)" "GO:0004088 (16.2%) GO:0005524 (16.2%) GO:0004359 (2.9%)" "'de novo' pyrimidine nucleobase biosynthetic process (16.2%) L-arginine biosynthetic process (16.2%) glutamine metabolic process (16.2%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (16.2%) ATP binding (16.2%) glutaminase activity (2.9%)" "IPR002474 (14.3%) IPR006274 (14.3%) IPR017926 (14.3%)" "Carbamoyl-phosphate synthase small subunit, N-terminal domain (14.3%) Carbamoyl-phosphate synthase, small subunit (14.3%) Glutamine amidotransferase (14.3%)" ATDASVPFADNMAAIYAATRNELYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" TLAAASSLGMEAMPKKEQAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR004389 (34.1%) IPR005484 (34.1%) IPR057268 (31.7%)" "Large ribosomal subunit protein uL18, bacteria (34.1%) Large ribosomal subunit protein uL18, bacterial/plantae/animalia (34.1%) Large ribosomal subunit protein uL18 (31.7%)" IAEDGNPQVLIKNPPSQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.1.11.- (100%) Exodeoxyribonucleases producing 5'-phosphomonoesters (100%) "GO:0006868 (0.8%) GO:1903803 (0.8%)" "GO:0005886 (25%) GO:0016020 (0.8%) GO:0055052 (0.8%)" "GO:0005524 (26.6%) GO:0016887 (22.7%) GO:0015424 (21.9%)" "glutamine transport (0.8%) L-glutamine import across plasma membrane (0.8%)" "plasma membrane (25%) membrane (0.8%) ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing (0.8%)" "ATP binding (26.6%) ATP hydrolysis activity (22.7%) ABC-type amino acid transporter activity (21.9%)" "IPR027417 (18.5%) IPR050086 (17.9%) IPR003439 (16.3%)" "P-loop containing nucleoside triphosphate hydrolase (18.5%) Methionine import ATP-binding protein MetN-like (17.9%) ABC transporter-like, ATP-binding domain (16.3%)" CGNEAQISIDSNSKPDYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.86 (100%) ketol-acid reductoisomerase (NADP(+)) (100%) "GO:0009097 (21.7%) GO:0009099 (21.7%)" "GO:0004455 (21.7%) GO:0046872 (21.7%) GO:0016853 (13%)" "isoleucine biosynthetic process (21.7%) L-valine biosynthetic process (21.7%)" "ketol-acid reductoisomerase activity (21.7%) metal ion binding (21.7%) isomerase activity (13%)" "IPR000506 (16.7%) IPR008927 (16.7%) IPR013023 (16.7%)" "Ketol-acid reductoisomerase, C-terminal (16.7%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.7%) Ketol-acid reductoisomerase (16.7%)" NMVTGAAQMDGSILVVAATDGPMPQTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (14.6%) GO:0032045 (13.5%)" "GO:0000287 (14.6%) GO:0003746 (14.6%) GO:0003924 (14.6%)" "cytosol (14.6%) guanyl-nucleotide exchange factor complex (13.5%)" "magnesium ion binding (14.6%) translation elongation factor activity (14.6%) GTPase activity (14.6%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" ALSSGETVDSGGKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0007059 (25%) GO:0045881 (25%)" GO:0005694 (25%) GO:0003677 (25%) "chromosome segregation (25%) positive regulation of sporulation resulting in formation of a cellular spore (25%)" chromosome (25%) DNA binding (25%) "IPR003115 (16.7%) IPR004437 (16.7%) IPR036086 (16.7%)" "ParB-like, N-terminal domain (16.7%) ParB/RepB/Spo0J partition protein (16.7%) ParB/Sulfiredoxin superfamily (16.7%)" DKDAVSACVILAEIAAWAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (24.5%) GO:0006166 (24.5%)" "GO:0008973 (24.5%) GO:0000287 (22.4%) GO:0004614 (4.1%)" "carbohydrate metabolic process (24.5%) purine ribonucleoside salvage (24.5%)" "phosphopentomutase activity (24.5%) magnesium ion binding (22.4%) phosphoglucomutase activity (4.1%)" "IPR005843 (13%) IPR005846 (13%) IPR016055 (13%)" "Alpha-D-phosphohexomutase, C-terminal (13%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (13%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (13%)" AADNKSLGQFNLDGINPAPR root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0006260 (0.2%) GO:0006950 (0.2%) GO:0009408 (0.2%)" "GO:0005737 (0.2%) GO:0005829 (0.2%) GO:0005886 (0.2%)" "GO:0005524 (25.4%) GO:0140662 (25.4%) GO:0051082 (23.2%)" "DNA replication (0.2%) response to stress (0.2%) response to heat (0.2%)" "cytoplasm (0.2%) cytosol (0.2%) plasma membrane (0.2%)" "ATP binding (25.4%) ATP-dependent protein folding chaperone (25.4%) unfolded protein binding (23.2%)" "IPR013126 (17.2%) IPR029047 (17.2%) IPR029048 (16.6%)" "Heat shock protein 70 family (17.2%) Heat shock protein 70kD, peptide-binding domain superfamily (17.2%) Heat shock protein 70kD, C-terminal domain superfamily (16.6%)" FLTAGSVDDGKSTLIGR Pseudomonadati Bacteria Pseudomonadati "2.7.7.4 (99.8%) 2.7.1.25 (0.2%)" "sulfate adenylyltransferase (99.8%) adenylyl-sulfate kinase (0.2%)" "GO:0006790 (18%) GO:0000103 (1.8%) GO:0070814 (1.8%)" "GO:0003924 (19.8%) GO:0005525 (19.8%) GO:0005524 (18.6%)" "sulfur compound metabolic process (18%) sulfate assimilation (1.8%) hydrogen sulfide biosynthetic process (1.8%)" "GTPase activity (19.8%) GTP binding (19.8%) ATP binding (18.6%)" "IPR027417 (9%) IPR000795 (9%) IPR031157 (9%)" "P-loop containing nucleoside triphosphate hydrolase (9%) Translational (tr)-type GTP-binding domain (9%) Tr-type G domain, conserved site (9%)" GTYEESHAIMNK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (25%)" GO:0005737 (25%) GO:0004801 (25%) "carbohydrate metabolic process (25%) pentose-phosphate shunt (25%)" cytoplasm (25%) transaldolase activity (25%) "IPR001585 (29.1%) IPR004732 (29.1%) IPR013785 (29.1%)" "Transaldolase/Fructose-6-phosphate aldolase (29.1%) Transaldolase type 2 (29.1%) Aldolase-type TIM barrel (29.1%)" LNRNEMENLVDEIAAEIKGEVID Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016020 (100%) membrane (100%) IPR024623 (100%) Uncharacterised protein family YtxH (100%) LVINFDVPHDSEDYVHR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.6.4.13 (63.6%) 3.6.4.- (36.4%)" "RNA helicase (63.6%) Acting on ATP; involved in cellular and subcellular movement (36.4%)" GO:0005829 (19.9%) "GO:0003724 (20.2%) GO:0005524 (20.2%) GO:0003676 (19.9%)" cytosol (19.9%) "RNA helicase activity (20.2%) ATP binding (20.2%) nucleic acid binding (19.9%)" "IPR001650 (14.4%) IPR014001 (14.4%) IPR027417 (14.4%)" "Helicase, C-terminal domain-like (14.4%) Helicase superfamily 1/2, ATP-binding domain (14.4%) P-loop containing nucleoside triphosphate hydrolase (14.4%)" EMLPVLEAVAK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.5%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (17.1%) GO:1990220 (0%) GO:0005829 (0%)" "GO:0140662 (17.5%) GO:0005524 (17.4%) GO:0016853 (17.3%)" "protein refolding (17.5%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (17.1%) GroEL-GroES complex (0%) cytosol (0%)" "ATP-dependent protein folding chaperone (17.5%) ATP binding (17.4%) isomerase activity (17.3%)" "IPR001844 (17.9%) IPR027409 (17.9%) IPR002423 (16.8%)" "Chaperonin Cpn60/GroEL (17.9%) GroEL-like apical domain superfamily (17.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%)" FVTAAMDTVTEAK Pseudomonadati Bacteria Pseudomonadati 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (20.7%) GO:0006177 (20%)" "GO:0003938 (20.7%) GO:0046872 (20%) GO:0000166 (18.4%)" "GTP biosynthetic process (20.7%) GMP biosynthetic process (20%)" "IMP dehydrogenase activity (20.7%) metal ion binding (20%) nucleotide binding (18.4%)" "IPR001093 (16.9%) IPR005990 (16.9%) IPR013785 (16.9%)" "IMP dehydrogenase/GMP reductase (16.9%) Inosine-5'-monophosphate dehydrogenase (16.9%) Aldolase-type TIM barrel (16.9%)" AQIAHFFEHYKDLEK root 3.6.1.1 (100%) inorganic diphosphatase (100%) GO:0006796 (24.8%) "GO:0005737 (24.7%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0000287 (24.8%) GO:0004427 (24.8%) GO:0016787 (0.4%)" phosphate-containing compound metabolic process (24.8%) "cytoplasm (24.7%) cytosol (0.1%) membrane (0.1%)" "magnesium ion binding (24.8%) inorganic diphosphate phosphatase activity (24.8%) hydrolase activity (0.4%)" "IPR008162 (50%) IPR036649 (50%)" "Inorganic pyrophosphatase (50%) Inorganic pyrophosphatase superfamily (50%)" RNPDTFIWGQDVANKDKGGVFNVTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (27.4%) GO:0003863 (6%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (27.4%) branched-chain 2-oxo acid dehydrogenase activity (6%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" YLQDYGMGPETPLGEPK root "1.3.5.1 (96.3%) 1.3.5.4 (3.1%) 1.3.99.1 (0.6%)" "succinate dehydrogenase (96.3%) Transferred entry: 1.3.5.1 (3.1%) Deleted entry (0.6%)" "GO:0009061 (14.3%) GO:0006113 (14.3%) GO:0022900 (13.7%)" "GO:0005886 (14.3%) GO:0045283 (0.1%) GO:0005829 (0%)" "GO:0009055 (14.3%) GO:0050660 (14.3%) GO:0000104 (10.4%)" "anaerobic respiration (14.3%) fermentation (14.3%) electron transport chain (13.7%)" "plasma membrane (14.3%) fumarate reductase complex (0.1%) cytosol (0%)" "electron transfer activity (14.3%) flavin adenine dinucleotide binding (14.3%) succinate dehydrogenase activity (10.4%)" "IPR003953 (11.1%) IPR030664 (11.1%) IPR027477 (11.1%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (11.1%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (11.1%) Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily (11.1%)" GMQFQQDAQQQLQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" STYLDLFGKEPEVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" EDDAYLLAGYPWFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005980 (33.3%) "GO:0004134 (33.3%) GO:0004135 (33.3%)" glycogen catabolic process (33.3%) "4-alpha-glucanotransferase activity (33.3%) amylo-alpha-1,6-glucosidase activity (33.3%)" "IPR008928 (20%) IPR010401 (20%) IPR012341 (20%)" "Six-hairpin glycosidase superfamily (20%) Glycogen debranching enzyme (20%) Six-hairpin glycosidase-like superfamily (20%)" MVSGTGHTGK Bacteria Bacteria GO:0005829 (100%) cytosol (100%) IPR017704 (100%) Putative selenium-binding protein YdfZ (100%) LGNEVPTVKDPEYFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" HCNWSMGTDK Bacteria Bacteria 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (50%) GO:0004356 (50%) glutamine biosynthetic process (50%) glutamine synthetase activity (50%) "IPR008146 (14.3%) IPR008147 (14.3%) IPR014746 (14.3%)" "Glutamine synthetase, catalytic domain (14.3%) Glutamine synthetase, N-terminal domain (14.3%) Glutamine synthetase/guanido kinase, catalytic domain (14.3%)" YLGDGIVTGYGTIDGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0015977 (22.9%) GO:0009317 (22.9%) "GO:0003989 (22.9%) GO:0004658 (22.9%) GO:0016740 (8.3%)" carbon fixation (22.9%) acetyl-CoA carboxylase complex (22.9%) "acetyl-CoA carboxylase activity (22.9%) propionyl-CoA carboxylase activity (22.9%) transferase activity (8.3%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" DALALMSEYR Pseudomonadati Bacteria Pseudomonadati 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" YDRHAMAGHGESGSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) GO:0042254 (16.8%) GO:0005737 (16.8%) "GO:0000287 (16.8%) GO:0003924 (16.8%) GO:0005525 (16.8%)" ribosome biogenesis (16.8%) cytoplasm (16.8%) "magnesium ion binding (16.8%) GTPase activity (16.8%) GTP binding (16.8%)" "IPR006073 (12.5%) IPR006074 (12.5%) IPR006169 (12.5%)" "GTP binding domain (12.5%) GTP1/OBG, conserved site (12.5%) GTP1/OBG domain (12.5%)" GSLMGAIQGLLLAQYEVLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.86 (92.8%) 1.1.1.- (7.2%)" "ketol-acid reductoisomerase (NADP(+)) (92.8%) With NAD(+) or NADP(+) as acceptor (7.2%)" "GO:0009097 (20.9%) GO:0009099 (20.9%)" GO:0070013 (0.3%) "GO:0004455 (20.9%) GO:0046872 (20.9%) GO:0016853 (16.1%)" "isoleucine biosynthetic process (20.9%) L-valine biosynthetic process (20.9%)" intracellular organelle lumen (0.3%) "ketol-acid reductoisomerase activity (20.9%) metal ion binding (20.9%) isomerase activity (16.1%)" "IPR000506 (16.7%) IPR008927 (16.7%) IPR013023 (16.7%)" "Ketol-acid reductoisomerase, C-terminal (16.7%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.7%) Ketol-acid reductoisomerase (16.7%)" KPNVPQTIRR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (87.5%) GO:0050112 (12.5%)" "nucleotide binding (87.5%) inositol 2-dehydrogenase (NAD+) activity (12.5%)" "IPR043906 (18.2%) IPR050463 (18.2%) IPR000683 (15.9%)" "Gfo/Idh/MocA-like oxidoreductase, bacterial type, C-terminal (18.2%) Gfo/Idh/MocA family oxidoreductases and glycosidases (18.2%) Gfo/Idh/MocA-like oxidoreductase, N-terminal (15.9%)" HGASCPIGLGVSCSADRNIK root 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (21.6%) "GO:0004333 (21.6%) GO:0046872 (21.6%) GO:0051539 (21.6%)" tricarboxylic acid cycle (21.6%) "fumarate hydratase activity (21.6%) metal ion binding (21.6%) 4 iron, 4 sulfur cluster binding (21.6%)" "IPR004646 (17.1%) IPR004647 (17.1%) IPR036660 (17.1%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (17.1%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (17.1%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (17.1%)" GKETPAPIDGFTNEQR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.24.- (100%) Metalloendopeptidases (100%) GO:0016485 (25%) GO:0005886 (25%) "GO:0004222 (25%) GO:0046872 (25%)" protein processing (25%) plasma membrane (25%) "metalloendopeptidase activity (25%) metal ion binding (25%)" "IPR000718 (20%) IPR008753 (20%) IPR018497 (20%)" "Peptidase M13 (20%) Peptidase M13, N-terminal domain (20%) Peptidase M13, C-terminal domain (20%)" VVNTSDLYFTPVKGNDPNSVIMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0015031 (25%) GO:0051205 (25%)" GO:0005886 (25%) GO:0032977 (25%) "protein transport (25%) protein insertion into membrane (25%)" plasma membrane (25%) membrane insertase activity (25%) "IPR001708 (16.7%) IPR019998 (16.7%) IPR028053 (16.7%)" "Membrane insertase YidC/ALB3/OXA1/COX18 (16.7%) Membrane insertase YidC (16.7%) Membrane insertase YidC, N-terminal (16.7%)" ASFVTLQDVGGR root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.5%) GO:0006418 (0%) GO:0034605 (0%)" "GO:0005829 (14.5%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0004824 (14.5%) GO:0000049 (14.4%) GO:0005524 (14.4%)" "lysyl-tRNA aminoacylation (14.5%) tRNA aminoacylation for protein translation (0%) cellular response to heat (0%)" "cytosol (14.5%) cytoplasm (0.1%) membrane (0%)" "lysine-tRNA ligase activity (14.5%) tRNA binding (14.4%) ATP binding (14.4%)" "IPR004365 (11.4%) IPR012340 (11.4%) IPR044136 (11.3%)" "OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.4%) Nucleic acid-binding, OB-fold (11.4%) Lysine-tRNA ligase, class II, N-terminal (11.3%)" NAEANELLEFDNGIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "7.1.2.2 (99%) 3.6.3.14 (1%)" "H(+)-transporting two-sector ATPase (99%) Transferred entry: 7.1.2.2 (1%)" GO:0015986 (0.2%) "GO:0045259 (18.1%) GO:0005886 (17.4%)" "GO:0005524 (18.1%) GO:0043531 (18.1%) GO:0046933 (18.1%)" proton motive force-driven ATP synthesis (0.2%) "proton-transporting ATP synthase complex (18.1%) plasma membrane (17.4%)" "ATP binding (18.1%) ADP binding (18.1%) proton-transporting ATP synthase activity, rotational mechanism (18.1%)" "IPR000194 (10.1%) IPR004100 (10.1%) IPR005294 (10.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.1%) ATP synthase, F1 complex, alpha subunit (10.1%)" NAATMALASLPEEWKR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0016616 (93.3%) GO:0031132 (6.7%)" "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (93.3%) serine 3-dehydrogenase activity (6.7%)" "IPR002347 (33.3%) IPR020904 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Short-chain dehydrogenase/reductase, conserved site (33.3%) NAD(P)-binding domain superfamily (33.3%)" KLPQQIILGSETASTVSSR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) "GO:0004553 (42%) GO:0004565 (8%)" carbohydrate metabolic process (50%) "hydrolase activity, hydrolyzing O-glycosyl compounds (42%) beta-galactosidase activity (8%)" "IPR006102 (7.9%) IPR006103 (7.9%) IPR006104 (7.9%)" "Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.9%) Glycoside hydrolase family 2, catalytic domain (7.9%) Glycosyl hydrolases family 2, sugar binding domain (7.9%)" RVEIVILANQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (16.7%) IPR006665 (16.7%) IPR006690 (16.7%)" "Outer membrane protein, bacterial (16.7%) OmpA-like domain (16.7%) Outer membrane protein, OmpA-like, conserved site (16.7%)" MKVAVLGAAGGIGQALALLLK root "1.1.1.37 (99.9%) 1.-.-.- (0.1%) 1.1.1.- (0.1%)" "malate dehydrogenase (99.9%) Oxidoreductases (0.1%) With NAD(+) or NADP(+) as acceptor (0.1%)" "GO:0006099 (25%) GO:0006108 (23.1%) GO:0019752 (1.5%)" "GO:0005737 (25%) GO:0016020 (0.1%) GO:0005829 (0%)" "GO:0030060 (25.1%) GO:0016491 (0.1%) GO:0016615 (0%)" "tricarboxylic acid cycle (25%) malate metabolic process (23.1%) carboxylic acid metabolic process (1.5%)" "cytoplasm (25%) membrane (0.1%) cytosol (0%)" "L-malate dehydrogenase (NAD+) activity (25.1%) oxidoreductase activity (0.1%) malate dehydrogenase activity (0%)" "IPR036291 (12.8%) IPR001236 (12.8%) IPR010097 (12.5%)" "NAD(P)-binding domain superfamily (12.8%) Lactate/malate dehydrogenase, N-terminal (12.8%) Malate dehydrogenase, type 1 (12.5%)" LLDQAQAGDNIGALLR Bacteria Bacteria 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0006414 (0.1%) "GO:0005829 (20.6%) GO:0005737 (0.3%)" "GO:0003746 (21.1%) GO:0005525 (20.9%) GO:0003924 (20.5%)" translational elongation (0.1%) "cytosol (20.6%) cytoplasm (0.3%)" "translation elongation factor activity (21.1%) GTP binding (20.9%) GTPase activity (20.5%)" "IPR009000 (8.6%) IPR050055 (8.6%) IPR004160 (8.5%)" "Translation protein, beta-barrel domain superfamily (8.6%) Elongation factor Tu GTPase (8.6%) Translation elongation factor EFTu/EF1A, C-terminal (8.5%)" VIGVGGGGGNAVHNMYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0000917 (14.3%) GO:0043093 (14.3%) GO:0051258 (14.3%)" "GO:0005737 (14.3%) GO:0032153 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%)" "division septum assembly (14.3%) FtsZ-dependent cytokinesis (14.3%) protein polymerization (14.3%)" "cytoplasm (14.3%) cell division site (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" LLNDTDMAIIDKR root 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11%)" "GO:0005737 (11.1%) GO:0002189 (11.1%) GO:0005829 (0%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0016301 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11%)" "cytoplasm (11.1%) ribose phosphate diphosphokinase complex (11.1%) cytosol (0%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) kinase activity (11.1%)" "IPR000836 (16.9%) IPR005946 (16.9%) IPR029057 (16.9%)" "Phosphoribosyltransferase domain (16.9%) Ribose-phosphate pyrophosphokinase (16.9%) Phosphoribosyltransferase-like (16.9%)" HVGVLQGSTQEAYANETWR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (46.7%) GO:0006995 (0.4%) GO:0009267 (0.4%)" "GO:0030288 (47.6%) GO:0030313 (1.3%) GO:0016020 (0.4%)" "GO:0016597 (0.4%) GO:0016787 (0.4%)" "amino acid transport (46.7%) cellular response to nitrogen starvation (0.4%) cellular response to starvation (0.4%)" "outer membrane-bounded periplasmic space (47.6%) cell envelope (1.3%) membrane (0.4%)" "amino acid binding (0.4%) hydrolase activity (0.4%)" "IPR001638 (34.7%) IPR018313 (32.8%) IPR005768 (32.5%)" "Solute-binding protein family 3/N-terminal domain of MltF (34.7%) Solute-binding protein family 3, conserved site (32.8%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (32.5%)" IVLPEGTEER Bacteria Bacteria 2.3.1.8 (100%) phosphate acetyltransferase (100%) GO:0006085 (13%) GO:0005737 (16.1%) "GO:0008959 (43.2%) GO:0016407 (26.5%) GO:0016746 (1.2%)" acetyl-CoA biosynthetic process (13%) cytoplasm (16.1%) "phosphate acetyltransferase activity (43.2%) acetyltransferase activity (26.5%) acyltransferase activity (1.2%)" "IPR002505 (15.1%) IPR042113 (15.1%) IPR050500 (15.1%)" "Phosphate acetyl/butaryl transferase (15.1%) Phosphate acetyltransferase, domain 1 (15.1%) Phosphate Acetyltransferase/Butyryltransferase (15.1%)" TLFNGDNLGLQTYSVVR Pseudomonadati Bacteria Pseudomonadati GO:0033103 (49.9%) "GO:0033104 (49.9%) GO:0016020 (0.1%)" protein secretion by the type VI secretion system (49.9%) "type VI protein secretion system complex (49.9%) membrane (0.1%)" IPR035576 (100%) Type VI secretion system TssC (100%) AAENAGDSGPFSQEALDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0044718 (7.7%) GO:0009279 (84.6%) GO:0015344 (7.7%) siderophore transmembrane transport (7.7%) cell outer membrane (84.6%) siderophore uptake transmembrane transporter activity (7.7%) "IPR023996 (13%) IPR023997 (13%) IPR037066 (13%)" "TonB-dependent outer membrane protein, SusC/RagA (13%) TonB-dependent outer membrane protein SusC/RagA, conserved site (13%) TonB-dependent receptor, plug domain superfamily (13%)" TESGNIWLDPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) "GO:0006437 (16.7%) GO:0043039 (0.1%)" GO:0005829 (16.7%) "GO:0004831 (16.7%) GO:0005524 (16.7%) GO:0003723 (16.6%)" "tyrosyl-tRNA aminoacylation (16.7%) tRNA aminoacylation (0.1%)" cytosol (16.7%) "tyrosine-tRNA ligase activity (16.7%) ATP binding (16.7%) RNA binding (16.6%)" "IPR002305 (12.6%) IPR002307 (12.6%) IPR024088 (12.6%)" "Aminoacyl-tRNA synthetase, class Ic (12.6%) Tyrosine-tRNA ligase (12.6%) Tyrosine-tRNA ligase, bacterial-type (12.6%)" MNGQSVGIVANQPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.-.-.- (100%) Ligases (100%) GO:0015977 (20.8%) GO:0009317 (20.8%) "GO:0004658 (33.3%) GO:0003989 (20.8%) GO:0016740 (4.2%)" carbon fixation (20.8%) acetyl-CoA carboxylase complex (20.8%) "propionyl-CoA carboxylase activity (33.3%) acetyl-CoA carboxylase activity (20.8%) transferase activity (4.2%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" SVIPYSSAEQAGIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006508 (50%) GO:0008233 (50%) proteolysis (50%) peptidase activity (50%) "IPR001478 (33.3%) IPR025411 (33.3%) IPR036034 (33.3%)" "PDZ domain (33.3%) Domain of unknown function DUF4136 (33.3%) PDZ superfamily (33.3%)" QFIVATESGVIHEMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.5.1.72 (100%) quinolinate synthase (100%) GO:0034628 (20%) GO:0005829 (20%) "GO:0008987 (20%) GO:0046872 (20%) GO:0051539 (20%)" 'de novo' NAD+ biosynthetic process from L-aspartate (20%) cytosol (20%) "quinolinate synthetase A activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR003473 (33.3%) IPR023066 (33.3%) IPR036094 (33.3%)" "Quinolinate synthetase A (33.3%) Quinolinate synthase A, type 2 (33.3%) Quinolinate synthetase A superfamily (33.3%)" VRDVYNINGEQLVMVATDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" QDKYAAEYAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.7%) "GO:0005840 (17%) GO:0005737 (16.7%) GO:1990904 (16.4%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "ribosome (17%) cytoplasm (16.7%) ribonucleoprotein complex (16.4%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" ILELEKDSIYNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006353 (19.6%) GO:0031564 (19.6%)" GO:0005829 (19.6%) "GO:0003700 (19.6%) GO:0003723 (19.6%) GO:0003746 (1.9%)" "DNA-templated transcription termination (19.6%) transcription antitermination (19.6%)" cytosol (19.6%) "DNA-binding transcription factor activity (19.6%) RNA binding (19.6%) translation elongation factor activity (1.9%)" "IPR013735 (12.5%) IPR030842 (12.5%) IPR036555 (12.5%)" "Transcription factor NusA, N-terminal (12.5%) Transcription factor NusA, prokaryotes (12.5%) NusA, N-terminal domain superfamily (12.5%)" IGVIFASGIGGIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" GGVPVCWPWFGPAAQQGLPAHGFAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "5.1.3.15 (98.4%) 5.1.3.- (1.6%)" "glucose-6-phosphate 1-epimerase (98.4%) Acting on carbohydrates and derivatives (1.6%)" "GO:0005975 (24.9%) GO:0006974 (0.2%)" "GO:0005737 (24.9%) GO:0005829 (0.2%)" "GO:0030246 (24.9%) GO:0047938 (24.9%)" "carbohydrate metabolic process (24.9%) DNA damage response (0.2%)" "cytoplasm (24.9%) cytosol (0.2%)" "carbohydrate binding (24.9%) glucose-6-phosphate 1-epimerase activity (24.9%)" "IPR008183 (25.2%) IPR011013 (25.2%) IPR014718 (25.2%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (25.2%) Galactose mutarotase-like domain superfamily (25.2%) Glycoside hydrolase-type carbohydrate-binding (25.2%)" TGRNPQTGK root 3.4.21.- (100%) Serine endopeptidases (100%) "GO:0030261 (11.6%) GO:0006270 (10.6%) GO:0006351 (10.3%)" "GO:0005829 (11.6%) GO:1990103 (10.6%) GO:1990178 (10.6%)" "GO:0003677 (11.9%) GO:0030527 (11.7%) GO:0042802 (10.6%)" "chromosome condensation (11.6%) DNA replication initiation (10.6%) DNA-templated transcription (10.3%)" "cytosol (11.6%) DnaA-HU complex (10.6%) HU-DNA complex (10.6%)" "DNA binding (11.9%) structural constituent of chromatin (11.7%) identical protein binding (10.6%)" "IPR000119 (33.8%) IPR010992 (33.7%) IPR020816 (32%)" "Histone-like DNA-binding protein (33.8%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.7%) Histone-like DNA-binding protein, conserved site (32%)" LTGNGVTIVEGEAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (26.8%) GO:0005737 (19.5%) "GO:0004148 (26.8%) GO:0050660 (26.8%)" 2-oxoglutarate metabolic process (26.8%) cytoplasm (19.5%) "dihydrolipoyl dehydrogenase (NADH) activity (26.8%) flavin adenine dinucleotide binding (26.8%)" "IPR004099 (12.9%) IPR006258 (12.9%) IPR012999 (12.9%)" "Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.9%) Dihydrolipoamide dehydrogenase (12.9%) Pyridine nucleotide-disulphide oxidoreductase, class I, active site (12.9%)" TRELESAYR Bacteria Bacteria 2.7.13.3 (100%) histidine kinase (100%) "GO:0033103 (45%) GO:0006260 (0.9%) GO:0007059 (0.9%)" "GO:0033104 (45%) GO:0005694 (0.9%) GO:0005737 (0.9%)" "GO:0005524 (1.8%) GO:0000155 (0.9%) GO:0003677 (0.9%)" "protein secretion by the type VI secretion system (45%) DNA replication (0.9%) chromosome segregation (0.9%)" "type VI protein secretion system complex (45%) chromosome (0.9%) cytoplasm (0.9%)" "ATP binding (1.8%) phosphorelay sensor kinase activity (0.9%) DNA binding (0.9%)" "IPR035576 (78.1%) IPR000644 (1.6%) IPR003395 (1.6%)" "Type VI secretion system TssC (78.1%) CBS domain (1.6%) RecF/RecN/SMC, N-terminal (1.6%)" ATQDFLWGFVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.16.3.2 (99.1%) 1.16.3.1 (0.9%)" "bacterial non-heme ferritin (99.1%) ferroxidase (0.9%)" "GO:0006826 (14.3%) GO:0006879 (14.3%)" "GO:0005829 (14.3%) GO:0005737 (0.1%)" "GO:0008199 (14.4%) GO:0004322 (14.3%) GO:0008198 (14.3%)" "iron ion transport (14.3%) intracellular iron ion homeostasis (14.3%)" "cytosol (14.3%) cytoplasm (0.1%)" "ferric iron binding (14.4%) ferroxidase activity (14.3%) ferrous iron binding (14.3%)" "IPR008331 (16.7%) IPR009040 (16.7%) IPR009078 (16.7%)" "Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%) Ferritin-like superfamily (16.7%)" AGAEGAQIIENPILSNFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) GO:0000428 (16.8%) "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0000287 (16.2%)" DNA-templated transcription (16.8%) DNA-directed RNA polymerase complex (16.8%) "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) magnesium ion binding (16.2%)" "IPR007081 (9.2%) IPR007083 (9.2%) IPR000722 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.2%) RNA polymerase Rpb1, domain 4 (9.2%) RNA polymerase, alpha subunit (9.1%)" GIVFIDEIDKIAR root "3.4.21.92 (50%) 3.4.25.2 (50%)" "endopeptidase Clp (50%) HslU--HslV peptidase (50%)" "GO:0051603 (10.3%) GO:0051301 (9.8%) GO:0043335 (0.2%)" "GO:0009376 (10.1%) GO:0005759 (0.2%)" "GO:0005524 (10.3%) GO:0016887 (10.3%) GO:0051082 (9.9%)" "proteolysis involved in protein catabolic process (10.3%) cell division (9.8%) protein unfolding (0.2%)" "HslUV protease complex (10.1%) mitochondrial matrix (0.2%)" "ATP binding (10.3%) ATP hydrolysis activity (10.3%) unfolded protein binding (9.9%)" "IPR003959 (10.9%) IPR050052 (10.9%) IPR027417 (10.8%)" "ATPase, AAA-type, core (10.9%) ATP-dependent Clp protease ATP-binding subunit ClpX (10.9%) P-loop containing nucleoside triphosphate hydrolase (10.8%)" YLGGEELTEAEIKGALR Bacteria Bacteria 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0032790 (17.1%) GO:0006412 (0.1%) GO:0006414 (0.1%)" "GO:0005737 (15.8%) GO:0005829 (0.1%)" "GO:0003746 (17.8%) GO:0005525 (17.1%) GO:0003924 (16.7%)" "ribosome disassembly (17.1%) translation (0.1%) translational elongation (0.1%)" "cytoplasm (15.8%) cytosol (0.1%)" "translation elongation factor activity (17.8%) GTP binding (17.1%) GTPase activity (16.7%)" "IPR027417 (6.6%) IPR009000 (6.3%) IPR000795 (6.2%)" "P-loop containing nucleoside triphosphate hydrolase (6.6%) Translation protein, beta-barrel domain superfamily (6.3%) Translational (tr)-type GTP-binding domain (6.2%)" FIDKVNDAKEDVLTDGIQTFPDRTDR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "5.1.3.15 (99.4%) 5.1.3.- (0.6%)" "glucose-6-phosphate 1-epimerase (99.4%) Acting on carbohydrates and derivatives (0.6%)" GO:0005975 (25%) GO:0005737 (24.9%) "GO:0030246 (25%) GO:0047938 (25%)" carbohydrate metabolic process (25%) cytoplasm (24.9%) "carbohydrate binding (25%) glucose-6-phosphate 1-epimerase activity (25%)" "IPR011013 (25.4%) IPR014718 (25.4%) IPR008183 (25.3%)" "Galactose mutarotase-like domain superfamily (25.4%) Glycoside hydrolase-type carbohydrate-binding (25.4%) Aldose 1-/Glucose-6-phosphate 1-epimerase (25.3%)" HFAPNFLEDQSNEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" TVLGEDISMEDLGGAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.1.3.1 (50%) 6.-.-.- (50%)" "methylmalonyl-CoA carboxytransferase (50%) Ligases (50%)" GO:0015977 (22.5%) GO:0009317 (22.5%) "GO:0004658 (23.6%) GO:0003989 (22.5%) GO:0016740 (6.7%)" carbon fixation (22.5%) acetyl-CoA carboxylase complex (22.5%) "propionyl-CoA carboxylase activity (23.6%) acetyl-CoA carboxylase activity (22.5%) transferase activity (6.7%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" EAPAQIEALIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.3.16 (100%) L-aspartate oxidase (100%) GO:0034628 (33.3%) GO:0005737 (33.3%) GO:0008734 (33.3%) 'de novo' NAD+ biosynthetic process from L-aspartate (33.3%) cytoplasm (33.3%) L-aspartate oxidase activity (33.3%) "IPR003953 (16.7%) IPR005288 (16.7%) IPR015939 (16.7%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (16.7%) L-aspartate oxidase (16.7%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (16.7%)" MKDVVDKCSTK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0005829 (100%) cytosol (100%) "IPR035571 (50.2%) IPR005272 (49.8%)" "UPF0234-like, C-terminal (50.2%) Protein of unknown function DUF406 (49.8%)" TREGNDFYHEMTDSNVIDK root "7.1.2.2 (94.5%) 3.6.3.14 (5.3%) 3.6.1.15 (0.1%)" "H(+)-transporting two-sector ATPase (94.5%) Transferred entry: 7.1.2.2 (5.3%) nucleoside-triphosphate phosphatase (0.1%)" GO:0042777 (0%) "GO:0045259 (24.8%) GO:0005886 (19.8%) GO:0005739 (0%)" "GO:0005524 (24.8%) GO:0046933 (24.8%) GO:0016787 (4.5%)" proton motive force-driven plasma membrane ATP synthesis (0%) "proton-transporting ATP synthase complex (24.8%) plasma membrane (19.8%) mitochondrion (0%)" "ATP binding (24.8%) proton-transporting ATP synthase activity, rotational mechanism (24.8%) hydrolase activity (4.5%)" "IPR000194 (12.4%) IPR050053 (12.4%) IPR027417 (12.4%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (12.4%) ATPase alpha/beta chains (12.4%) P-loop containing nucleoside triphosphate hydrolase (12.4%)" ETSEVNIGAVPLGGPNPIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.17.7.3 (96.9%) 1.17.7.1 (3.1%)" "(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (96.9%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) (3.1%)" "GO:0016114 (17.6%) GO:0019288 (17.6%)" "GO:0046429 (17.6%) GO:0051539 (17.6%) GO:0005506 (17%)" "terpenoid biosynthetic process (17.6%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.6%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.6%) 4 iron, 4 sulfur cluster binding (17.6%) iron ion binding (17%)" "IPR004588 (25.4%) IPR011005 (25.4%) IPR017178 (24.6%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25.4%) Dihydropteroate synthase-like superfamily (25.4%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (24.6%)" NQGDHLLHSTRK root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0006260 (0.1%) GO:0042026 (0.1%) GO:0051085 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0005524 (25.6%) GO:0140662 (25.6%) GO:0051082 (24.2%)" "DNA replication (0.1%) protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytosol (0.1%) cytoplasm (0%) plasma membrane (0%)" "ATP binding (25.6%) ATP-dependent protein folding chaperone (25.6%) unfolded protein binding (24.2%)" "IPR013126 (17.1%) IPR029048 (17%) IPR029047 (16.8%)" "Heat shock protein 70 family (17.1%) Heat shock protein 70kD, C-terminal domain superfamily (17%) Heat shock protein 70kD, peptide-binding domain superfamily (16.8%)" NPNLTQNEGYSAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (34.8%) IPR012944 (34.8%) IPR033985 (30.4%)" "Tetratricopeptide-like helical domain superfamily (34.8%) RagB/SusD domain (34.8%) SusD-like, N-terminal (30.4%)" LILLDSGSRNEASK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (30.9%) GO:0006044 (30.9%)" "GO:0004342 (30.9%) GO:0016853 (7.3%)" "carbohydrate metabolic process (30.9%) N-acetylglucosamine metabolic process (30.9%)" "glucosamine-6-phosphate deaminase activity (30.9%) isomerase activity (7.3%)" "IPR003737 (14.3%) IPR004547 (14.3%) IPR006148 (14.3%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.3%) Glucosamine-6-phosphate isomerase (14.3%) Glucosamine/galactosamine-6-phosphate isomerase (14.3%)" IRVQLSAGHETEHLDK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (14.8%) GO:0030148 (13.9%)" "GO:0016020 (13.9%) GO:0005829 (12.3%) GO:0005737 (1.6%)" "GO:0008890 (14.8%) GO:0030170 (14.8%) GO:0016874 (7.4%)" "L-threonine catabolic process to glycine (14.8%) sphingolipid biosynthetic process (13.9%)" "membrane (13.9%) cytosol (12.3%) cytoplasm (1.6%)" "glycine C-acetyltransferase activity (14.8%) pyridoxal phosphate binding (14.8%) ligase activity (7.4%)" "IPR004839 (16.2%) IPR011282 (16.2%) IPR015421 (16.2%)" "Aminotransferase, class I/classII, large domain (16.2%) 2-amino-3-ketobutyrate coenzyme A ligase (16.2%) Pyridoxal phosphate-dependent transferase, major domain (16.2%)" VQLSAGHEKEHLDK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (13.8%) GO:0030148 (13.7%) GO:0006567 (0.2%)" "GO:0016020 (13.7%) GO:0005829 (13.5%) GO:0005737 (0.3%)" "GO:0030170 (14.3%) GO:0008890 (14.2%) GO:0004758 (8.5%)" "L-threonine catabolic process to glycine (13.8%) sphingolipid biosynthetic process (13.7%) L-threonine catabolic process (0.2%)" "membrane (13.7%) cytosol (13.5%) cytoplasm (0.3%)" "pyridoxal phosphate binding (14.3%) glycine C-acetyltransferase activity (14.2%) serine C-palmitoyltransferase activity (8.5%)" "IPR004839 (16.8%) IPR015422 (16.8%) IPR015424 (16.8%)" "Aminotransferase, class I/classII, large domain (16.8%) Pyridoxal phosphate-dependent transferase, small domain (16.8%) Pyridoxal phosphate-dependent transferase (16.8%)" TLWVPALKQDR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 3.1.1.31 (100%) 6-phosphogluconolactonase (100%) "GO:0006006 (25%) GO:0009051 (24.1%) GO:0006098 (0.1%)" GO:0005829 (25.1%) "GO:0017057 (25.2%) GO:0016787 (0.4%) GO:0016853 (0.1%)" "glucose metabolic process (25%) pentose-phosphate shunt, oxidative branch (24.1%) pentose-phosphate shunt (0.1%)" cytosol (25.1%) "6-phosphogluconolactonase activity (25.2%) hydrolase activity (0.4%) isomerase activity (0.1%)" "IPR019405 (20.2%) IPR015943 (20.2%) IPR050282 (20.1%)" "Lactonase, 7-bladed beta-propeller (20.2%) WD40/YVTN repeat-like-containing domain superfamily (20.2%) Cycloisomerase 2 (20.1%)" TIWIDDNYFNAR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006355 (20%) GO:0000160 (0.2%)" "GO:0005829 (19.9%) GO:0032993 (19.9%)" "GO:0000156 (19.9%) GO:0000976 (19.9%) GO:0003677 (0.1%)" "regulation of DNA-templated transcription (20%) phosphorelay signal transduction system (0.2%)" "cytosol (19.9%) protein-DNA complex (19.9%)" "phosphorelay response regulator activity (19.9%) transcription cis-regulatory region binding (19.9%) DNA binding (0.1%)" "IPR001867 (17.5%) IPR036388 (17.4%) IPR001789 (17.3%)" "OmpR/PhoB-type DNA-binding domain (17.5%) Winged helix-like DNA-binding domain superfamily (17.4%) Signal transduction response regulator, receiver domain (17.3%)" FALATNDNLAEGSAFNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" MMNGIGGSGDFTR root "2.8.3.- (69.3%) 3.1.2.1 (26%) 2.8.3.18 (4%)" "CoA-transferases (69.3%) acetyl-CoA hydrolase (26%) succinyl-CoA:acetate CoA-transferase (4%)" "GO:0006083 (25.2%) GO:0006084 (24%)" GO:0016020 (0%) "GO:0003986 (25.2%) GO:0008775 (25.2%) GO:0003676 (0.2%)" "acetate metabolic process (25.2%) acetyl-CoA metabolic process (24%)" membrane (0%) "acetyl-CoA hydrolase activity (25.2%) acetate CoA-transferase activity (25.2%) nucleic acid binding (0.2%)" "IPR026888 (16.9%) IPR037171 (16.9%) IPR038460 (16.9%)" "Acetyl-CoA hydrolase/transferase, C-terminal domain (16.9%) NagB/RpiA transferase-like (16.9%) Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily (16.9%)" ENATFDLYELEETHTSTVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR011542 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufD (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" VVFSNLQDKLAVTELFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.3%) IPR036373 (33.3%) IPR047859 (33.3%)" "Large ribosomal subunit protein bL17 (33.3%) Large ribosomal subunit protein bL17 superfamily (33.3%) Large ribosomal subunit protein bL17, conserved site (33.3%)" TIVEPGSIYAGVPAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.30 (100%) serine O-acetyltransferase (100%) "GO:0016740 (85.7%) GO:0009001 (14.3%)" "transferase activity (85.7%) serine O-acetyltransferase activity (14.3%)" "IPR001451 (25%) IPR011004 (25%) IPR047324 (25%)" "Hexapeptide repeat (25%) Trimeric LpxA-like superfamily (25%) Gamma carbonic anhydrase-like (25%)" MAELCTPIIYGSSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.262 (100%) 4-hydroxythreonine-4-phosphate dehydrogenase (100%) "GO:0046872 (33.3%) GO:0051287 (33.3%) GO:0016491 (19%)" "metal ion binding (33.3%) NAD binding (33.3%) oxidoreductase activity (19%)" IPR005255 (100%) PdxA family (100%) GTPEQPKEEK root "GO:0050821 (49.2%) GO:0009408 (0.6%) GO:1990169 (0.6%)" GO:0005737 (49.2%) GO:0042802 (0.6%) "protein stabilization (49.2%) response to heat (0.6%) stress response to copper ion (0.6%)" cytoplasm (49.2%) identical protein binding (0.6%) "IPR002068 (25.9%) IPR008978 (25.9%) IPR037913 (24.6%)" "Alpha crystallin/Hsp20 domain (25.9%) HSP20-like chaperone (25.9%) Small heat shock protein IbpA/IbpB, ACD domain (24.6%)" QTLAIGDKVTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" RVVFAEANHVNMLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (17.6%) "GO:0016746 (17.6%) GO:0046872 (17.6%) GO:0051287 (17.6%)" malate metabolic process (17.6%) "acyltransferase activity (17.6%) metal ion binding (17.6%) NAD binding (17.6%)" "IPR002505 (9%) IPR012188 (9%) IPR012301 (9%)" "Phosphate acetyl/butaryl transferase (9%) NAD(P)-dependent malic enzyme (9%) Malic enzyme, N-terminal domain (9%)" MQVDVLDCLGCGNCADICPGFKGNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (83.3%) 1.2.7.- (16.7%)" "pyruvate synthase (83.3%) With an iron-sulfur protein as acceptor (16.7%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (12.7%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (12.7%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" SGTEIIANENSQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) "IPR036866 (50%) IPR050114 (50%)" "Ribonuclease Z/Hydroxyacylglutathione hydrolase-like (50%) UPF0173/UPF0282/UlaG metal-dependent hydrolases (50%)" VGEEVQIIGLGAAGKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20.5%) "GO:0003746 (20.5%) GO:0003924 (20.5%) GO:0005525 (20.5%)" cytosol (20.5%) "translation elongation factor activity (20.5%) GTPase activity (20.5%) GTP binding (20.5%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" DFILADLITAASEGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015562 (100%) efflux transmembrane transporter activity (100%) "IPR003423 (50%) IPR050737 (50%)" "Outer membrane efflux protein (50%) Unknown (50%)" GIEDGTWEQGTAQYEKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.1 (60%) 1.2.1.51 (20%) 1.2.7.- (20%)" "pyruvate synthase (60%) pyruvate dehydrogenase (NADP(+)) (20%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (11.3%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (11.3%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" NKQLCASGIGQTSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" AGSVVVSGNLPSKDGK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 2.3.1.117 (100%) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (100%) "GO:0019877 (20%) GO:0009089 (19.8%) GO:0009085 (0.3%)" "GO:0005737 (19.5%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0008666 (20.1%) GO:0016779 (20%) GO:0016746 (0.2%)" "diaminopimelate biosynthetic process (20%) lysine biosynthetic process via diaminopimelate (19.8%) lysine biosynthetic process (0.3%)" "cytoplasm (19.5%) cytosol (0%) membrane (0%)" "2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity (20.1%) nucleotidyltransferase activity (20%) acyltransferase activity (0.2%)" "IPR011004 (17%) IPR001451 (16.8%) IPR005664 (16.6%)" "Trimeric LpxA-like superfamily (17%) Hexapeptide repeat (16.8%) Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family (16.6%)" FLPYLESLIGAFHK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.3%) IPR008948 (14.3%) IPR018951 (14.3%)" "Fumarate lyase family (14.3%) L-Aspartase-like (14.3%) Fumarase C, C-terminal (14.3%)" ESVKEVGSYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000244 (14.3%) IPR009027 (14.3%) IPR020069 (14.3%)" "Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.3%) Large ribosomal subunit protein bL9, C-terminal (14.3%)" IDRPEEYADIATK root 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) "GO:0005975 (0.3%) GO:0008360 (0.3%) GO:0009254 (0.3%)" "GO:0005829 (0.6%) GO:0005737 (0.3%) GO:0019867 (0.3%)" "GO:0016787 (96.3%) GO:0016788 (0.6%) GO:0004563 (0.3%)" "carbohydrate metabolic process (0.3%) regulation of cell shape (0.3%) peptidoglycan turnover (0.3%)" "cytosol (0.6%) cytoplasm (0.3%) outer membrane (0.3%)" "hydrolase activity (96.3%) hydrolase activity, acting on ester bonds (0.6%) beta-N-acetylhexosaminidase activity (0.3%)" "IPR008886 (33.6%) IPR029058 (33.3%) IPR022987 (32.5%)" "Uncharacterised protein family UPF0227/Esterase YqiA (33.6%) Alpha/Beta hydrolase fold (33.3%) Uncharacterised protein family UPF0227 (32.5%)" SEATPAEAVDKLLEALKQ Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "4.2.1.20 (90%) 5.3.1.24 (10%)" "tryptophan synthase (90%) phosphoribosylanthranilate isomerase (10%)" GO:0005829 (47.4%) "GO:0004834 (47.4%) GO:0004640 (5.3%)" cytosol (47.4%) "tryptophan synthase activity (47.4%) phosphoribosylanthranilate isomerase activity (5.3%)" "IPR002028 (24.3%) IPR011060 (24.3%) IPR013785 (24.3%)" "Tryptophan synthase, alpha chain (24.3%) Ribulose-phosphate binding barrel (24.3%) Aldolase-type TIM barrel (24.3%)" GEIQCIGATTLDEYRK root "3.4.21.- (42.1%) 3.4.21.92 (36.8%) 2.7.11.1 (10.5%)" "Serine endopeptidases (42.1%) endopeptidase Clp (36.8%) non-specific serine/threonine protein kinase (10.5%)" "GO:0034605 (18.2%) GO:0006508 (9.3%) GO:0045037 (0.3%)" "GO:0005737 (13.1%) GO:0009570 (3.8%) GO:0032991 (3.8%)" "GO:0005524 (19.1%) GO:0016887 (19%) GO:0008233 (9.3%)" "cellular response to heat (18.2%) proteolysis (9.3%) protein import into chloroplast stroma (0.3%)" "cytoplasm (13.1%) chloroplast stroma (3.8%) protein-containing complex (3.8%)" "ATP binding (19.1%) ATP hydrolysis activity (19%) peptidase activity (9.3%)" "IPR050130 (8.6%) IPR003959 (8.6%) IPR041546 (8.6%)" "ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%) ATPase, AAA-type, core (8.6%) ClpA/ClpB, AAA lid domain (8.6%)" AWDAWVVAGHAPVR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 3.5.4.- (100%) In cyclic amidines (100%) GO:0044010 (3.4%) GO:0005829 (3.4%) "GO:0016787 (88.1%) GO:0120241 (5.1%)" single-species biofilm formation (3.4%) cytosol (3.4%) "hydrolase activity (88.1%) 2-iminobutanoate/2-iminopropanoate deaminase (5.1%)" "IPR006175 (25.9%) IPR035709 (25.9%) IPR035959 (25.9%)" "YjgF/YER057c/UK114 family (25.9%) RutC family, YoaB-like (25.9%) RutC-like superfamily (25.9%)" DMVDSAPSAIKEGIAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" KNPDGANEIINK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.3%) GO:0009090 (17.3%) GO:0009088 (13.3%)" GO:0005829 (17.3%) "GO:0004072 (17.3%) GO:0005524 (17.3%)" "lysine biosynthetic process via diaminopimelate (17.3%) homoserine biosynthetic process (17.3%) threonine biosynthetic process (13.3%)" cytosol (17.3%) "aspartate kinase activity (17.3%) ATP binding (17.3%)" "IPR001048 (14.3%) IPR001341 (14.3%) IPR005260 (14.3%)" "Aspartate/glutamate/uridylate kinase (14.3%) Aspartate kinase (14.3%) Aspartate kinase, monofunctional class (14.3%)" VIIDYPKQEEEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR011703 (25%) IPR027417 (25%) IPR041628 (25%)" "ATPase, AAA-3 (25%) P-loop containing nucleoside triphosphate hydrolase (25%) ChlI/MoxR, AAA lid domain (25%)" KGESEDVVEVFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (32.8%) "GO:0003921 (32.8%) GO:0005524 (32.8%) GO:0016740 (1.7%)" cytosol (32.8%) "GMP synthase activity (32.8%) ATP binding (32.8%) transferase activity (1.7%)" "IPR001674 (16.7%) IPR014729 (16.7%) IPR017926 (16.7%)" "GMP synthase, C-terminal (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Glutamine amidotransferase (16.7%)" TIEKPENLTLEECQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.6.2.1 (100%) DNA topoisomerase (100%) GO:0006265 (25%) "GO:0003677 (25%) GO:0003917 (25%) GO:0046872 (25%)" DNA topological change (25%) "DNA binding (25%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25%) metal ion binding (25%)" "IPR000380 (7.1%) IPR003601 (7.1%) IPR003602 (7.1%)" "DNA topoisomerase, type IA (7.1%) DNA topoisomerase, type IA, domain 2 (7.1%) DNA topoisomerase, type IA, DNA-binding domain (7.1%)" STCSVLTELCMPGNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (40%) "GO:0004493 (40%) GO:0051213 (13.3%) GO:0016829 (6.7%)" L-methylmalonyl-CoA metabolic process (40%) "methylmalonyl-CoA epimerase activity (40%) dioxygenase activity (13.3%) lyase activity (6.7%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" ILVELPGVKEPER Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006605 (19.2%) GO:0043952 (19.2%) GO:0065002 (19.2%)" GO:0005886 (20.7%) GO:0015450 (20.2%) "protein targeting (19.2%) protein transport by the Sec complex (19.2%) intracellular protein transmembrane transport (19.2%)" plasma membrane (20.7%) protein-transporting ATPase activity (20.2%) "IPR022813 (10.7%) IPR048631 (10.7%) IPR005791 (10.4%)" "Protein-export membrane protein SecD/SecF, archaeal and bacterial (10.7%) Protein translocase subunit SecDF, P1 domain, N-terminal (10.7%) Protein translocase subunit SecD (10.4%)" AVIENYAQYAGVKPEQVLVSR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.6.1.9 (100%) histidinol-phosphate transaminase (100%) GO:0000105 (32.8%) GO:0005829 (0%) "GO:0030170 (33.3%) GO:0004400 (33.2%) GO:0008483 (0.6%)" L-histidine biosynthetic process (32.8%) cytosol (0%) "pyridoxal phosphate binding (33.3%) histidinol-phosphate transaminase activity (33.2%) transaminase activity (0.6%)" "IPR004839 (16.8%) IPR015424 (16.8%) IPR015421 (16.8%)" "Aminotransferase, class I/classII, large domain (16.8%) Pyridoxal phosphate-dependent transferase (16.8%) Pyridoxal phosphate-dependent transferase, major domain (16.8%)" FKYFLSQALGCNANEVEGMVIGGHGDTTMIPLAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (26.1%) GO:0006099 (23.9%)" "GO:0004459 (26.1%) GO:0030060 (23.6%) GO:0016491 (0.4%)" "lactate metabolic process (26.1%) tricarboxylic acid cycle (23.9%)" "L-lactate dehydrogenase (NAD+) activity (26.1%) L-malate dehydrogenase (NAD+) activity (23.6%) oxidoreductase activity (0.4%)" "IPR001236 (16.9%) IPR015955 (16.9%) IPR022383 (16.9%)" "Lactate/malate dehydrogenase, N-terminal (16.9%) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (16.9%) Lactate/malate dehydrogenase, C-terminal (16.9%)" TFVDDAGNVIIRKPATPGMENR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25.4%) IPR002933 (25.4%) IPR011650 (25.4%)" "Peptidase M20C, Xaa-His dipeptidase (25.4%) Peptidase M20 (25.4%) Peptidase M20, dimerisation domain (25.4%)" MFHYYVTPQSTGNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (24.6%) GO:0009341 (24.6%) "GO:0004565 (24.6%) GO:0030246 (24.6%) GO:0004560 (1.6%)" lactose catabolic process (24.6%) beta-galactosidase complex (24.6%) "beta-galactosidase activity (24.6%) carbohydrate binding (24.6%) alpha-L-fucosidase activity (1.6%)" "IPR004199 (7.1%) IPR006101 (7.1%) IPR006102 (7.1%)" "Beta galactosidase small chain/ domain 5 (7.1%) Glycoside hydrolase, family 2 (7.1%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.1%)" VVDPNEDNFTGFIFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006449 (16.7%) GO:0005829 (16.7%) "GO:0003924 (16.7%) GO:0005525 (16.7%) GO:0016149 (16.7%)" regulation of translational termination (16.7%) cytosol (16.7%) "GTPase activity (16.7%) GTP binding (16.7%) translation release factor activity, codon specific (16.7%)" "IPR000795 (9.1%) IPR004548 (9.1%) IPR005225 (9.1%)" "Translational (tr)-type GTP-binding domain (9.1%) Peptide chain release factor 3 (9.1%) Small GTP-binding domain (9.1%)" GEYQYCSPNDHVNCSQSTNDAYPTAIHIGMYFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.3%) IPR008948 (14.3%) IPR018951 (14.3%)" "Fumarate lyase family (14.3%) L-Aspartase-like (14.3%) Fumarase C, C-terminal (14.3%)" LSEPTEDEKLEAIAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.2.1.5 (96.3%) 6.2.1.- (3.7%)" "succinate--CoA ligase (ADP-forming) (96.3%) Acid--thiol ligases (3.7%)" "GO:0006099 (13.3%) GO:0006104 (13.3%)" "GO:0005829 (13.3%) GO:0042709 (13.3%)" "GO:0000287 (13.3%) GO:0004775 (13.3%) GO:0005524 (13.3%)" "tricarboxylic acid cycle (13.3%) succinyl-CoA metabolic process (13.3%)" "cytosol (13.3%) succinate-CoA ligase complex (13.3%)" "magnesium ion binding (13.3%) succinate-CoA ligase (ADP-forming) activity (13.3%) ATP binding (13.3%)" "IPR005809 (16.7%) IPR005811 (16.7%) IPR013650 (16.7%)" "Succinate--CoA ligase-like, beta subunit (16.7%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (16.7%) ATP-grasp fold, succinyl-CoA synthetase-type (16.7%)" VSQGVKDYLGTEVIAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (8%) IPR015712 (8%) IPR007121 (7.8%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (8%) DNA-directed RNA polymerase, subunit 2 (8%) RNA polymerase, beta subunit, conserved site (7.8%)" EWTKPFHEAGIQTHMLDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.4.1.7 (66.7%) 6.4.1.1 (25%) 4.1.1.3 (8.3%)" "2-oxoglutarate carboxylase (66.7%) pyruvate carboxylase (25%) Transferred entry: 4.1.1.112 and 7.2.4.2 (8.3%)" GO:0006094 (1.9%) GO:0005737 (1.9%) "GO:0004736 (84%) GO:0034029 (10.3%) GO:0016829 (1.3%)" gluconeogenesis (1.9%) cytoplasm (1.9%) "pyruvate carboxylase activity (84%) 2-oxoglutarate carboxylase activity (10.3%) lyase activity (1.3%)" "IPR000891 (14.5%) IPR013785 (14.5%) IPR003379 (14.3%)" "Pyruvate carboxyltransferase (14.5%) Aldolase-type TIM barrel (14.5%) Carboxylase, conserved domain (14.3%)" ATPPKLEDKSPDSPEMKDFR root GO:0022900 (20.1%) GO:0042597 (19.8%) "GO:0005506 (20.1%) GO:0009055 (20.1%) GO:0020037 (20.1%)" electron transport chain (20.1%) periplasmic space (19.8%) "iron ion binding (20.1%) electron transfer activity (20.1%) heme binding (20.1%)" "IPR009155 (50%) IPR010980 (50%)" "Cytochrome b562 (50%) Cytochrome c/b562 (50%)" AANIMLEAGANSVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" DAYFDFDLFHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (24%) GO:0009263 (3.1%)" "GO:0004748 (24%) GO:0031419 (24%) GO:0000166 (20.8%)" "DNA biosynthetic process (24%) deoxyribonucleotide biosynthetic process (3.1%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (24%) cobalamin binding (24%) nucleotide binding (20.8%)" "IPR000788 (32%) IPR013344 (32%) IPR050862 (32%)" "Ribonucleotide reductase large subunit, C-terminal (32%) Ribonucleotide reductase, adenosylcobalamin-dependent (32%) Ribonucleoside diphosphate reductase class-2 (32%)" NAAGGYSLVAVKDVTDGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) EQHVTIPAHQVNAEFFEEGK root 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (14.4%) GO:0019740 (14.3%) GO:0009314 (0%)" "GO:0005737 (14.3%) GO:0016020 (14.3%) GO:0005829 (0%)" "GO:0004356 (14.4%) GO:0005524 (13.9%) GO:0046872 (13.8%)" "glutamine biosynthetic process (14.4%) nitrogen utilization (14.3%) response to radiation (0%)" "cytoplasm (14.3%) membrane (14.3%) cytosol (0%)" "glutamine synthetase activity (14.4%) ATP binding (13.9%) metal ion binding (13.8%)" "IPR008147 (12.7%) IPR036651 (12.7%) IPR027302 (12.7%)" "Glutamine synthetase, N-terminal domain (12.7%) Glutamine synthetase, N-terminal domain superfamily (12.7%) Glutamine synthetase, N-terminal conserved site (12.7%)" ANLPGYLGNCHSSGTVILDQLGEEHMK root 5.4.2.7 (100%) phosphopentomutase (100%) "GO:0043094 (13%) GO:0009117 (13%) GO:0006018 (12.2%)" "GO:0005829 (13%) GO:0005737 (0%)" "GO:0000287 (13%) GO:0008973 (13%) GO:0030145 (12.2%)" "metabolic compound salvage (13%) nucleotide metabolic process (13%) 2-deoxyribose 1-phosphate catabolic process (12.2%)" "cytosol (13%) cytoplasm (0%)" "magnesium ion binding (13%) phosphopentomutase activity (13%) manganese ion binding (12.2%)" "IPR010045 (25.1%) IPR024052 (25.1%) IPR017850 (25%)" "Phosphopentomutase (25.1%) Phosphopentomutase DeoB cap domain superfamily (25.1%) Alkaline-phosphatase-like, core domain superfamily (25%)" MTVMDIIAEGLDIHGLCK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0015833 (25%) GO:0055085 (25%)" "GO:0005524 (25%) GO:0016887 (25%)" "peptide transport (25%) transmembrane transport (25%)" "ATP binding (25%) ATP hydrolysis activity (25%)" "IPR003439 (16.7%) IPR003593 (16.7%) IPR013563 (16.7%)" "ABC transporter-like, ATP-binding domain (16.7%) AAA+ ATPase domain (16.7%) Oligopeptide/dipeptide ABC transporter, C-terminal (16.7%)" NQYYGITAGPAYR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0009279 (50%) GO:0044384 (50%)" "cell outer membrane (50%) host outer membrane (50%)" "IPR000758 (25%) IPR011250 (25%) IPR051723 (25%)" "Virulence-related outer membrane protein (25%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (25%) Bacterial Outer Membrane Invasion-Related Protein (25%)" AILLHTIDDAWKENLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (11.1%) GO:0008564 (0.3%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (11.1%) protein-exporting ATPase activity (0.3%)" "IPR000185 (8%) IPR004027 (8%) IPR011116 (8%)" "Protein translocase subunit SecA (8%) SEC-C motif (8%) SecA Wing/Scaffold (8%)" GVVESIDETHGFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.- (100%) Peroxidases (100%) GO:0005829 (33.3%) "GO:0004601 (33.3%) GO:0020037 (33.3%)" cytosol (33.3%) "peroxidase activity (33.3%) heme binding (33.3%)" "IPR006314 (25%) IPR011008 (25%) IPR048327 (25%)" "Dyp-type peroxidase (25%) Dimeric alpha-beta barrel (25%) Dyp-type peroxidase, N-terminal domain (25%)" LIAEMPFGTSTQEPGEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0034599 (33.3%) GO:0005737 (33.3%) GO:0016491 (33.3%) cellular response to oxidative stress (33.3%) cytoplasm (33.3%) oxidoreductase activity (33.3%) "IPR000415 (33.3%) IPR029479 (33.3%) IPR033877 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase Frm2/Hbn1-like (33.3%)" RFAVMEPLESDQLHDITIAAYK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR011990 (52%) IPR041662 (48%)" "Tetratricopeptide-like helical domain superfamily (52%) SusD-like 2 (48%)" NSVEDFDSEEAISRPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.4%) IPR011013 (7.4%) IPR014718 (7.4%)" "Beta galactosidase small chain/ domain 5 (7.4%) Galactose mutarotase-like domain superfamily (7.4%) Glycoside hydrolase-type carbohydrate-binding (7.4%)" DWLYVEDHCK Bacteria Bacteria "4.2.1.46 (99.6%) 4.2.1.47 (0.4%)" "dTDP-glucose 4,6-dehydratase (99.6%) GDP-mannose 4,6-dehydratase (0.4%)" GO:0009225 (49.1%) GO:0016020 (1%) "GO:0008460 (49.4%) GO:0016829 (0.5%) GO:0016746 (0.1%)" nucleotide-sugar metabolic process (49.1%) membrane (1%) "dTDP-glucose 4,6-dehydratase activity (49.4%) lyase activity (0.5%) acyltransferase activity (0.1%)" "IPR036291 (33.3%) IPR005888 (32.8%) IPR016040 (30.6%)" "NAD(P)-binding domain superfamily (33.3%) dTDP-glucose 4,6-dehydratase (32.8%) NAD(P)-binding domain (30.6%)" VFGLESFGFSAPYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.2.1.1 (97.1%) 2.2.1.- (2.9%)" "transketolase (97.1%) Transketolases and transaldolases (2.9%)" GO:0006098 (24.9%) "GO:0005829 (24.9%) GO:0016020 (0.7%)" "GO:0004802 (24.9%) GO:0046872 (24.5%)" pentose-phosphate shunt (24.9%) "cytosol (24.9%) membrane (0.7%)" "transketolase activity (24.9%) metal ion binding (24.5%)" "IPR009014 (12.7%) IPR033247 (12.7%) IPR055152 (12.7%)" "Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.7%) Transketolase family (12.7%) Transketolase-like, C-terminal domain (12.7%)" SVTDENDLMIINK Bacteroidota Bacteria Pseudomonadati Bacteroidota 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (12.6%) GO:0006261 (12%)" "GO:0005737 (12.6%) GO:0009330 (12.6%) GO:0005694 (12.2%)" "GO:0003677 (12.6%) GO:0005524 (12.6%) GO:0034335 (12.1%)" "DNA topological change (12.6%) DNA-templated DNA replication (12%)" "cytoplasm (12.6%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.6%) chromosome (12.2%)" "DNA binding (12.6%) ATP binding (12.6%) DNA negative supercoiling activity (12.1%)" "IPR002205 (12.6%) IPR006691 (12.6%) IPR013757 (12.6%)" "DNA topoisomerase, type IIA, domain A (12.6%) DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.6%) DNA topoisomerase, type IIA, alpha-helical domain superfamily (12.6%)" VIDLLEPYSK root "7.1.2.2 (98.5%) 3.6.3.14 (1.5%)" "H(+)-transporting two-sector ATPase (98.5%) Transferred entry: 7.1.2.2 (1.5%)" "GO:0045259 (25.5%) GO:0005886 (18.6%)" "GO:0005524 (25.5%) GO:0046933 (25.5%) GO:0016787 (4.3%)" "proton-transporting ATP synthase complex (25.5%) plasma membrane (18.6%)" "ATP binding (25.5%) proton-transporting ATP synthase activity, rotational mechanism (25.5%) hydrolase activity (4.3%)" "IPR050053 (11.4%) IPR000194 (11.3%) IPR004100 (11.3%)" "ATPase alpha/beta chains (11.4%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (11.3%)" YRHEYLMDETNANFEDKNGVVDYLGIWNKDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) IGLIGLGQTGYNTAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.29 (55.6%) 1.1.1.290 (33.3%) 1.1.1.81 (11.1%)" "glycerate dehydrogenase (55.6%) 4-phosphoerythronate dehydrogenase (33.3%) hydroxypyruvate reductase (11.1%)" "GO:0051287 (50%) GO:0016616 (40.9%) GO:0008465 (5.7%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (40.9%) hydroxypyruvate reductase (NADH) activity (5.7%)" "IPR006140 (20.1%) IPR029753 (20.1%) IPR036291 (20.1%)" "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (20.1%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (20.1%) NAD(P)-binding domain superfamily (20.1%)" IYDICEFIHDIVKPSSLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0005829 (50%) GO:0016491 (50%) cytosol (50%) oxidoreductase activity (50%) IPR004017 (100%) Cysteine-rich domain (100%) AVNEAQSIAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" IRPTAEELANYGEPDFVSFNAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.8%) GO:0005829 (18.8%) "GO:0004612 (18.8%) GO:0005524 (18.8%) GO:0046872 (18.8%)" gluconeogenesis (18.8%) cytosol (18.8%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.8%) ATP binding (18.8%) metal ion binding (18.8%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" GKDFQAVMDEAVALFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.8%) GO:0008615 (19.8%)" GO:0005737 (19.8%) "GO:0004648 (19.8%) GO:0030170 (19.8%) GO:0008483 (1.2%)" "L-serine biosynthetic process (19.8%) pyridoxine biosynthetic process (19.8%)" cytoplasm (19.8%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.8%) pyridoxal phosphate binding (19.8%) transaminase activity (1.2%)" "IPR000192 (20%) IPR015421 (20%) IPR015422 (20%)" "Aminotransferase class V domain (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" RINEKEMENAYLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (32%) IPR019734 (32%) IPR051685 (31.2%)" "Tetratricopeptide-like helical domain superfamily (32%) Tetratricopeptide repeat (32%) Ycf3/AcsC/BcsC/TPR Multifunctional (31.2%)" MVLETGEHPGALKDMVCSPGGTTIEAVR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.5.1.2 (100%) pyrroline-5-carboxylate reductase (100%) GO:0055129 (33.2%) "GO:0005737 (32.1%) GO:0005829 (0.4%)" "GO:0004735 (33.2%) GO:0016491 (0.7%) GO:0042802 (0.4%)" L-proline biosynthetic process (33.2%) "cytoplasm (32.1%) cytosol (0.4%)" "pyrroline-5-carboxylate reductase activity (33.2%) oxidoreductase activity (0.7%) identical protein binding (0.4%)" "IPR008927 (16.8%) IPR029036 (16.8%) IPR053790 (16.8%)" "6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.8%) Pyrroline-5-carboxylate reductase, dimerisation domain (16.8%) Pyrroline-5-carboxylate reductase-like conserved site (16.8%)" EALEKAEEAGVDLVEISPNAEPPVCR root 6.1.1.3 (100%) threonine--tRNA ligase (100%) "GO:0032790 (19.8%) GO:0006435 (0.1%) GO:0001731 (0%)" "GO:0005829 (19.9%) GO:0016020 (19.8%) GO:0005840 (0%)" "GO:0003743 (20.1%) GO:0043022 (19.8%) GO:0000049 (0.1%)" "ribosome disassembly (19.8%) threonyl-tRNA aminoacylation (0.1%) formation of translation preinitiation complex (0%)" "cytosol (19.9%) membrane (19.8%) ribosome (0%)" "translation initiation factor activity (20.1%) ribosome binding (19.8%) tRNA binding (0.1%)" "IPR001288 (16.6%) IPR019814 (16.6%) IPR036787 (16.6%)" "Translation initiation factor 3 (16.6%) Translation initiation factor 3, N-terminal (16.6%) Translation initiation factor 3 (IF-3), N-terminal domain superfamily (16.6%)" HAVIALTSIYGVGK Bacteria Bacteria "GO:0006412 (16.6%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0005829 (16.5%) GO:0015935 (16.5%) GO:0005840 (0.5%)" "GO:0003735 (16.6%) GO:0019843 (16.6%) GO:0000049 (16.5%)" "translation (16.6%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosol (16.5%) small ribosomal subunit (16.5%) ribosome (0.5%)" "structural constituent of ribosome (16.6%) rRNA binding (16.6%) tRNA binding (16.5%)" "IPR001892 (20%) IPR010979 (20%) IPR027437 (20%)" "Small ribosomal subunit protein uS13 (20%) Small ribosomal subunit protein uS13-like, H2TH (20%) Small ribosomal subunit protein uS13, C-terminal (20%)" KGANHQCAPIPEEGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides EGGEYHIIIVDNGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006089 (32.7%) GO:1903457 (0.4%)" "GO:0046872 (33.2%) GO:0051539 (33.2%) GO:0004459 (0.4%)" "lactate metabolic process (32.7%) lactate catabolic process (0.4%)" "metal ion binding (33.2%) 4 iron, 4 sulfur cluster binding (33.2%) L-lactate dehydrogenase (NAD+) activity (0.4%)" "IPR003741 (13.8%) IPR004452 (13.8%) IPR009051 (13.8%)" "LUD domain (13.8%) L-lactate oxidation iron-sulfur protein LutB/LldF (13.8%) Alpha-helical ferredoxin (13.8%)" MTTEETKFQPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0044281 (33.3%) "GO:0016625 (33.3%) GO:0030976 (33.3%)" small molecule metabolic process (33.3%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (33.3%) thiamine pyrophosphate binding (33.3%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" IFGTIDNTPISSITMGVATILAAKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (30.8%) GO:0006044 (30.8%)" "GO:0004342 (30.8%) GO:0016853 (7.7%)" "carbohydrate metabolic process (30.8%) N-acetylglucosamine metabolic process (30.8%)" "glucosamine-6-phosphate deaminase activity (30.8%) isomerase activity (7.7%)" "IPR003737 (14.3%) IPR004547 (14.3%) IPR006148 (14.3%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.3%) Glucosamine-6-phosphate isomerase (14.3%) Glucosamine/galactosamine-6-phosphate isomerase (14.3%)" LLDNAAADLAAISGQKPLITK root "GO:0006412 (16.5%) GO:0000027 (0.1%) GO:0002181 (0.1%)" "GO:0005840 (17.3%) GO:1990904 (16.4%) GO:0005829 (0.2%)" "GO:0003735 (16.5%) GO:0000049 (16.3%) GO:0019843 (16.3%)" "translation (16.5%) ribosomal large subunit assembly (0.1%) cytoplasmic translation (0.1%)" "ribosome (17.3%) ribonucleoprotein complex (16.4%) cytosol (0.2%)" "structural constituent of ribosome (16.5%) tRNA binding (16.3%) rRNA binding (16.3%)" "IPR020929 (16.5%) IPR022803 (16.5%) IPR031310 (16.5%)" "Large ribosomal subunit protein uL5, conserved site (16.5%) Large ribosomal subunit protein uL5 domain superfamily (16.5%) Large ribosomal subunit protein uL5, N-terminal (16.5%)" VIGITNEEAISTAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.5.1.47 (99.3%) 4.5.1.5 (0.7%)" "cysteine synthase (99.3%) S-carboxymethylcysteine synthase (0.7%)" "GO:0006535 (36.2%) GO:0006534 (0.3%) GO:0008652 (0.3%)" "GO:0005737 (0.3%) GO:0005829 (0.3%) GO:0009333 (0.3%)" "GO:0004124 (37.3%) GO:0016829 (20.8%) GO:0016740 (1.4%)" "cysteine biosynthetic process from serine (36.2%) cysteine metabolic process (0.3%) amino acid biosynthetic process (0.3%)" "cytoplasm (0.3%) cytosol (0.3%) cysteine synthase complex (0.3%)" "cysteine synthase activity (37.3%) lyase activity (20.8%) transferase activity (1.4%)" "IPR001926 (17.1%) IPR036052 (17.1%) IPR050214 (17.1%)" "Tryptophan synthase beta chain-like, PALP domain (17.1%) Tryptophan synthase beta chain-like, PALP domain superfamily (17.1%) Cysteine synthase/Cystathionine beta-synthase (17.1%)" DLKEMIGFGGSPR Caecibacteroides pullorum Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Caecibacteroides Caecibacteroides pullorum "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR011703 (25%) IPR027417 (25%) IPR041628 (25%)" "ATPase, AAA-3 (25%) P-loop containing nucleoside triphosphate hydrolase (25%) ChlI/MoxR, AAA lid domain (25%)" AANIPLVEEYASDDRDALLAFAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005524 (52.9%) GO:0003824 (29.4%) GO:0016874 (17.6%)" "ATP binding (52.9%) catalytic activity (29.4%) ligase activity (17.6%)" "IPR013815 (22%) IPR003781 (19.5%) IPR016102 (19.5%)" "ATP-grasp fold, subdomain 1 (22%) CoA-binding (19.5%) Succinyl-CoA synthetase-like (19.5%)" TGDDAGDGTTTATVLAQAIIAEGLKNVTAGASPMDIKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.5%) GO:0005737 (15.5%) "GO:0005524 (17.5%) GO:0140662 (17.5%) GO:0016853 (16.5%)" protein refolding (17.5%) cytoplasm (15.5%) "ATP binding (17.5%) ATP-dependent protein folding chaperone (17.5%) isomerase activity (16.5%)" "IPR001844 (17%) IPR002423 (17%) IPR027410 (17%)" "Chaperonin Cpn60/GroEL (17%) Chaperonin Cpn60/GroEL/TCP-1 family (17%) TCP-1-like chaperonin intermediate domain superfamily (17%)" DVKPHQIYVAGDLADPHGTHR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (33.3%) GO:0006044 (33.3%)" GO:0004342 (33.3%) "carbohydrate metabolic process (33.3%) N-acetylglucosamine metabolic process (33.3%)" glucosamine-6-phosphate deaminase activity (33.3%) "IPR003737 (14.9%) IPR004547 (14.9%) IPR006148 (14.9%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.9%) Glucosamine-6-phosphate isomerase (14.9%) Glucosamine/galactosamine-6-phosphate isomerase (14.9%)" YHAHDEKNECNVGDTVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022627 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000266 (25%) IPR012340 (25%) IPR019979 (25%)" "Small ribosomal subunit protein uS17 (25%) Nucleic acid-binding, OB-fold (25%) Small ribosomal subunit protein uS17, conserved site (25%)" VAAACPVPVVIAGGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.245 (85.7%) 4.1.2.- (14.3%)" "3-hydroxy-5-phosphooxypentane-2,4-dione thiolase (85.7%) Aldehyde-lyases (14.3%)" "GO:0004332 (66.7%) GO:0016746 (33.3%)" "fructose-bisphosphate aldolase activity (66.7%) acyltransferase activity (33.3%)" "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" AAHDLMYLGMDGSPIYSDDLSR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR010570 (50%) IPR038533 (50%)" "UpxZ family (50%) UpxZ superfamily (50%)" TLPQGATALDFAYALHSDIGNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.1.7.2 (100%) guanosine-3',5'-bis(diphosphate) 3'-diphosphatase (100%) GO:0015969 (36.4%) GO:0005886 (36.4%) "GO:0016787 (13.6%) GO:0008893 (9.1%) GO:0016301 (4.5%)" guanosine tetraphosphate metabolic process (36.4%) plasma membrane (36.4%) "hydrolase activity (13.6%) guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity (9.1%) kinase activity (4.5%)" "IPR002912 (10%) IPR003607 (10%) IPR004095 (10%)" "ACT domain (10%) HD/PDEase domain (10%) TGS (10%)" KISWMEIYTGEK root "1.1.1.42 (99.8%) 1.1.1.- (0.1%) 1.1.1.41 (0.1%)" "isocitrate dehydrogenase (NADP(+)) (99.8%) With NAD(+) or NADP(+) as acceptor (0.1%) isocitrate dehydrogenase (NAD(+)) (0.1%)" "GO:0006099 (21.2%) GO:0006097 (18.2%) GO:0006979 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004450 (21.2%) GO:0000287 (18.1%) GO:0051287 (18.1%)" "tricarboxylic acid cycle (21.2%) glyoxylate cycle (18.2%) response to oxidative stress (0%)" "cytoplasm (0%) cytosol (0%)" "isocitrate dehydrogenase (NADP+) activity (21.2%) magnesium ion binding (18.1%) NAD binding (18.1%)" "IPR004439 (35.1%) IPR024084 (34.9%) IPR019818 (30%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (35.1%) Isopropylmalate dehydrogenase-like domain (34.9%) Isocitrate/isopropylmalate dehydrogenase, conserved site (30%)" QFHIVDSEHEINNLLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (15.9%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (15.9%)" "IPR001114 (14.3%) IPR018220 (14.3%) IPR027417 (14.3%)" "Adenylosuccinate synthetase (14.3%) Adenylosuccinate synthase, GTP-binding site (14.3%) P-loop containing nucleoside triphosphate hydrolase (14.3%)" DNLSIQVHPDDELAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (17.3%) IPR014628 (17.3%) IPR014710 (17.3%)" "RmlC-like cupin domain superfamily (17.3%) Mannose-6-phosphate isomerase, Firmicutes type, short form (17.3%) RmlC-like jelly roll fold (17.3%)" LNSYEALLNEDQKER Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 3.6.1.- (100%) In phosphorus-containing anhydrides (100%) "GO:0006412 (12.5%) GO:0045900 (12.5%)" GO:0005737 (12.5%) "GO:0000049 (12.5%) GO:0005524 (12.5%) GO:0016887 (12.5%)" "translation (12.5%) negative regulation of translational elongation (12.5%)" cytoplasm (12.5%) "tRNA binding (12.5%) ATP binding (12.5%) ATP hydrolysis activity (12.5%)" "IPR003439 (16.7%) IPR003593 (16.7%) IPR017871 (16.7%)" "ABC transporter-like, ATP-binding domain (16.7%) AAA+ ATPase domain (16.7%) ABC transporter-like, conserved site (16.7%)" AVRFPGIISNVTPPGGGTTDYAVDIYYSAVKGEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.1.1.103 (80%) 5.1.3.- (20%)" "L-threonine 3-dehydrogenase (80%) Acting on carbohydrates and derivatives (20%)" GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" PTFTKEEIVHLGDLAR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 6.3.5.- (100%) Carbon--nitrogen ligases with glutamine as amido-N-donor (100%) "GO:0006450 (16.2%) GO:0070681 (16.2%) GO:0006412 (15.4%)" "GO:0005524 (15.4%) GO:0050567 (15.4%) GO:0016740 (13.2%)" "regulation of translational fidelity (16.2%) glutaminyl-tRNAGln biosynthesis via transamidation (16.2%) translation (15.4%)" "ATP binding (15.4%) glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity (15.4%) transferase activity (13.2%)" "IPR003837 (50%) IPR036113 (50%)" "Glu-tRNAGln amidotransferase C subunit (50%) Glu-tRNAGln amidotransferase superfamily, subunit C (50%)" DQKGAVASLTSVAK root 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (30.4%) GO:0005975 (0.1%) GO:0044814 (0%)" "GO:0005829 (32%) GO:0005737 (0.1%) GO:0005886 (0%)" "GO:0008861 (32%) GO:0016829 (4.8%) GO:0016746 (0.4%)" "glucose metabolic process (30.4%) carbohydrate metabolic process (0.1%) pyruvate fermentation via PFL (0%)" "cytosol (32%) cytoplasm (0.1%) plasma membrane (0%)" "formate C-acetyltransferase activity (32%) lyase activity (4.8%) acyltransferase activity (0.4%)" "IPR001150 (20.3%) IPR050244 (20.3%) IPR004184 (20%)" "Glycine radical domain (20.3%) Autonomous Glycyl Radical Cofactor (20.3%) Pyruvate formate lyase domain (20%)" ANITQVGLDKLNIELHR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (24.7%) GO:0005737 (24.7%) "GO:0004148 (24.7%) GO:0050660 (24.7%) GO:0016491 (1.1%)" 2-oxoglutarate metabolic process (24.7%) cytoplasm (24.7%) "dihydrolipoyl dehydrogenase (NADH) activity (24.7%) flavin adenine dinucleotide binding (24.7%) oxidoreductase activity (1.1%)" "IPR001100 (12.5%) IPR004099 (12.5%) IPR006258 (12.5%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (12.5%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.5%) Dihydrolipoamide dehydrogenase (12.5%)" MKVAIVGVSGAVGQEFLR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0019877 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) diaminopimelate biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000534 (20.1%) IPR012280 (20.1%) IPR036291 (20.1%)" "Semialdehyde dehydrogenase, NAD-binding (20.1%) Semialdehyde dehydrogenase, dimerisation domain (20.1%) NAD(P)-binding domain superfamily (20.1%)" VIVNEIVPAEVGYLNTIISKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) GO:0000428 (16.9%) "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (16.2%)" DNA-templated transcription (16.9%) DNA-directed RNA polymerase complex (16.9%) "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (16.2%)" "IPR000722 (9.3%) IPR006592 (9.3%) IPR007066 (9.3%)" "RNA polymerase, alpha subunit (9.3%) RNA polymerase, N-terminal (9.3%) RNA polymerase Rpb1, domain 3 (9.3%)" GEEQLFEQFRPNVEVVVNAQKDLCSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (10.6%) GO:0008564 (0.5%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (10.6%) protein-exporting ATPase activity (0.5%)" "IPR000185 (7.8%) IPR011115 (7.8%) IPR011130 (7.8%)" "Protein translocase subunit SecA (7.8%) SecA DEAD-like, N-terminal (7.8%) SecA, preprotein cross-linking domain (7.8%)" VTFSEISKFPAVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) "GO:0006432 (16.2%) GO:0006412 (0.5%)" "GO:0009328 (16.2%) GO:0005737 (0.5%)" "GO:0000049 (16.7%) GO:0005524 (16.7%) GO:0000287 (16.2%)" "phenylalanyl-tRNA aminoacylation (16.2%) translation (0.5%)" "phenylalanine-tRNA ligase complex (16.2%) cytoplasm (0.5%)" "tRNA binding (16.7%) ATP binding (16.7%) magnesium ion binding (16.2%)" "IPR005121 (7.9%) IPR036690 (7.9%) IPR002547 (7.7%)" "Ferrodoxin-fold anticodon-binding domain (7.9%) Ferrodoxin-fold anticodon-binding domain superfamily (7.9%) tRNA-binding domain (7.7%)" MENQATETR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR002130 (25.9%) IPR020892 (25.9%) IPR044666 (25.9%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (25.9%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (25.9%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like (25.9%)" FMHFINGFNQLFDENSNETIKNK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.8%) GO:0006044 (32.8%)" "GO:0004342 (32.8%) GO:0016853 (1.7%)" "carbohydrate metabolic process (32.8%) N-acetylglucosamine metabolic process (32.8%)" "glucosamine-6-phosphate deaminase activity (32.8%) isomerase activity (1.7%)" "IPR003737 (15%) IPR052960 (15%) IPR004547 (14.3%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (15%) Glucosamine-6-phosphate deaminase-like (15%) Glucosamine-6-phosphate isomerase (14.3%)" VYIQQYIHYLMLPMDMFVTAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" WVDYDEELFDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.1.1.173 (100%) 23S rRNA (guanine(2445)-N(2))-methyltransferase (100%) "GO:0003723 (33.3%) GO:0070043 (33.3%) GO:0008990 (27.3%)" "RNA binding (33.3%) rRNA (guanine-N7-)-methyltransferase activity (33.3%) rRNA (guanine-N2-)-methyltransferase activity (27.3%)" "IPR000241 (16.7%) IPR002052 (16.7%) IPR004114 (16.7%)" "Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain (16.7%) DNA methylase, N-6 adenine-specific, conserved site (16.7%) THUMP domain (16.7%)" FATPIFDGATLDDLNEWTDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (18.8%) GO:0006508 (3%)" GO:0000428 (18.8%) "GO:0003677 (18.8%) GO:0003899 (18.8%) GO:0032549 (18.8%)" "DNA-templated transcription (18.8%) proteolysis (3%)" DNA-directed RNA polymerase complex (18.8%) "DNA binding (18.8%) DNA-directed RNA polymerase activity (18.8%) ribonucleoside binding (18.8%)" "IPR007120 (7.6%) IPR007121 (7.6%) IPR007645 (7.6%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.6%) RNA polymerase, beta subunit, conserved site (7.6%) RNA polymerase Rpb2, domain 3 (7.6%)" KDGFTLAQEVR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006355 (19.9%) GO:0000160 (0.3%)" "GO:0005829 (19.9%) GO:0032993 (19.9%)" "GO:0000156 (19.9%) GO:0000976 (19.9%)" "regulation of DNA-templated transcription (19.9%) phosphorelay signal transduction system (0.3%)" "cytosol (19.9%) protein-DNA complex (19.9%)" "phosphorelay response regulator activity (19.9%) transcription cis-regulatory region binding (19.9%)" "IPR001789 (16.9%) IPR001867 (16.9%) IPR011006 (16.9%)" "Signal transduction response regulator, receiver domain (16.9%) OmpR/PhoB-type DNA-binding domain (16.9%) CheY-like superfamily (16.9%)" FNPALEEEGKNPFMLDSKEPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.1 (60%) 1.2.1.51 (20%) 1.2.7.- (20%)" "pyruvate synthase (60%) pyruvate dehydrogenase (NADP(+)) (20%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (11.4%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (11.4%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" TSTQVLVQAADLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR027848 (100%) Protein of unknown function DUF4494 (100%) TVTLQSHLDMVPQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" AEAEALEASGHNLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (15.6%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (15.6%)" "IPR001114 (14.6%) IPR027417 (14.6%) IPR033128 (14.6%)" "Adenylosuccinate synthetase (14.6%) P-loop containing nucleoside triphosphate hydrolase (14.6%) Adenylosuccinate synthase, active site (14.6%)" TILINHFLINK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0000917 (33.1%) "GO:0005525 (33.7%) GO:0046872 (33.1%)" division septum assembly (33.1%) "GTP binding (33.7%) metal ion binding (33.1%)" "IPR006073 (25.1%) IPR027417 (25.1%) IPR030393 (25.1%)" "GTP binding domain (25.1%) P-loop containing nucleoside triphosphate hydrolase (25.1%) EngB-type guanine nucleotide-binding (G) domain (25.1%)" SFTAPDPITDQIGQNVADFLAADMKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.8.3.- (80%) 3.1.2.1 (20%)" "CoA-transferases (80%) acetyl-CoA hydrolase (20%)" "GO:0006083 (25.4%) GO:0006084 (23.9%)" "GO:0003986 (25.4%) GO:0008775 (25.4%)" "acetate metabolic process (25.4%) acetyl-CoA metabolic process (23.9%)" "acetyl-CoA hydrolase activity (25.4%) acetate CoA-transferase activity (25.4%)" "IPR026888 (17%) IPR037171 (17%) IPR038460 (17%)" "Acetyl-CoA hydrolase/transferase, C-terminal domain (17%) NagB/RpiA transferase-like (17%) Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily (17%)" TDMCMTANPLETESHYDTTQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "6.3.1.- (50%) 6.3.1.2 (50%)" "Acid--ammonia (or amine) ligases (amide synthases) (50%) glutamine synthetase (50%)" "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" TLAADLANHGWNVAVVER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.16.1.1 (100%) mercury(II) reductase (100%) "GO:0003955 (30.2%) GO:0016668 (30.2%) GO:0050660 (30.2%)" "NAD(P)H dehydrogenase (quinone) activity (30.2%) oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (30.2%) flavin adenine dinucleotide binding (30.2%)" "IPR001100 (16.7%) IPR004099 (16.7%) IPR012999 (16.7%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (16.7%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (16.7%) Pyridine nucleotide-disulphide oxidoreductase, class I, active site (16.7%)" LDQAGRPYNEGEQVVIGGNER Bacteria Bacteria 2.7.1.21 (100%) thymidine kinase (100%) "GO:0046104 (16.6%) GO:0071897 (16.6%) GO:0036198 (0.1%)" GO:0005829 (16.6%) "GO:0004797 (17.4%) GO:0005524 (17.4%) GO:0008270 (14.3%)" "thymidine metabolic process (16.6%) DNA biosynthetic process (16.6%) dTMP salvage (0.1%)" cytosol (16.6%) "thymidine kinase activity (17.4%) ATP binding (17.4%) zinc ion binding (14.3%)" "IPR001267 (34%) IPR020633 (33.5%) IPR027417 (32.5%)" "Thymidine kinase (34%) Thymidine kinase, conserved site (33.5%) P-loop containing nucleoside triphosphate hydrolase (32.5%)" AGVDVLGISTDKPEK Bacteria Bacteria "1.11.1.24 (99.8%) 1.11.1.15 (0.2%)" "thioredoxin-dependent peroxiredoxin (99.8%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (0.2%)" "GO:0034599 (24.8%) GO:0045454 (24.8%) GO:0006508 (0.1%)" "GO:0005737 (24.8%) GO:0005829 (0.1%)" "GO:0008379 (24.8%) GO:0004601 (0.3%) GO:0004222 (0.1%)" "cellular response to oxidative stress (24.8%) cell redox homeostasis (24.8%) proteolysis (0.1%)" "cytoplasm (24.8%) cytosol (0.1%)" "thioredoxin peroxidase activity (24.8%) peroxidase activity (0.3%) metalloendopeptidase activity (0.1%)" "IPR000866 (20.2%) IPR036249 (20.2%) IPR050924 (20.2%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (20.2%) Thioredoxin-like superfamily (20.2%) Thiol-specific peroxidase BCP/PrxQ (20.2%)" TMPGVNLTGNSTSGQR root 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0044718 (16.8%) GO:0042930 (0%) GO:0006879 (0%)" "GO:0009279 (16.7%) GO:0016020 (0%) GO:0030313 (0%)" "GO:0015344 (16.8%) GO:0042912 (16.8%) GO:0042931 (16.8%)" "siderophore transmembrane transport (16.8%) enterobactin transport (0%) intracellular iron ion homeostasis (0%)" "cell outer membrane (16.7%) membrane (0%) cell envelope (0%)" "siderophore uptake transmembrane transporter activity (16.8%) colicin transmembrane transporter activity (16.8%) enterobactin transmembrane transporter activity (16.8%)" "IPR012910 (13.1%) IPR039426 (13.1%) IPR037066 (13.1%)" "TonB-dependent receptor, plug domain (13.1%) TonB-dependent receptor-like (13.1%) TonB-dependent receptor, plug domain superfamily (13.1%)" EGGNPVPANSILSVMGLGIK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0009401 (38.5%) GO:0005737 (38.5%) "GO:0016740 (15.4%) GO:0008965 (7.7%)" phosphoenolpyruvate-dependent sugar phosphotransferase system (38.5%) cytoplasm (38.5%) "transferase activity (15.4%) phosphoenolpyruvate-protein phosphotransferase activity (7.7%)" "IPR000032 (25%) IPR001020 (25%) IPR035895 (25%)" "Phosphocarrier protein HPr-like (25%) Phosphotransferase system, HPr histidine phosphorylation site (25%) HPr-like superfamily (25%)" QLDETINYLRENNPQDVLGAQDFIYR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR024302 (47.2%) IPR041662 (2.8%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (47.2%) SusD-like 2 (2.8%)" VISDILESNGSSSMATVCAGTLALR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8.3%) IPR003029 (8.3%) IPR004087 (8.3%)" "Exoribonuclease, phosphorolytic domain 1 (8.3%) S1 domain (8.3%) K Homology domain (8.3%)" VATYDLKPEMSAYEVK Bacteria Bacteria "5.4.2.12 (99.2%) 5.4.2.- (0.6%) 5.4.2.1 (0.2%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (99.2%) Phosphotransferases (phosphomutases) (0.6%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.2%)" "GO:0006007 (18.5%) GO:0006096 (18.3%) GO:0043937 (5.3%)" "GO:0005829 (18.4%) GO:0005737 (0%)" "GO:0004619 (18.5%) GO:0030145 (18.5%) GO:0016853 (0.3%)" "glucose catabolic process (18.5%) glycolytic process (18.3%) regulation of sporulation (5.3%)" "cytosol (18.4%) cytoplasm (0%)" "phosphoglycerate mutase activity (18.5%) manganese ion binding (18.5%) isomerase activity (0.3%)" "IPR005995 (20.1%) IPR006124 (20.1%) IPR017850 (20.1%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.1%) Metalloenzyme (20.1%) Alkaline-phosphatase-like, core domain superfamily (20.1%)" GLRYDLTVPFAR root 6.1.1.21 (100%) histidine--tRNA ligase (100%) "GO:0006427 (24.8%) GO:0006412 (0%) GO:0032543 (0%)" "GO:0005737 (24.9%) GO:0005739 (0%) GO:0005829 (0%)" "GO:0004821 (25%) GO:0005524 (24.9%) GO:0016874 (0.1%)" "histidyl-tRNA aminoacylation (24.8%) translation (0%) mitochondrial translation (0%)" "cytoplasm (24.9%) mitochondrion (0%) cytosol (0%)" "histidine-tRNA ligase activity (25%) ATP binding (24.9%) ligase activity (0.1%)" "IPR041715 (12.7%) IPR045864 (12.7%) IPR015807 (12.6%)" "Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain (12.7%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (12.7%) Histidine-tRNA ligase (12.6%)" KQAAEELEHAHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.3%) GO:0006879 (14.3%)" GO:0005829 (14.3%) "GO:0004322 (14.3%) GO:0008198 (14.3%) GO:0008199 (14.3%)" "iron ion transport (14.3%) intracellular iron ion homeostasis (14.3%)" cytosol (14.3%) "ferroxidase activity (14.3%) ferrous iron binding (14.3%) ferric iron binding (14.3%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" ATGREEVAAMADSVAADLR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" HLAEFKNFETEYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" SHHNVGGLPEDLQFELVEPLR root 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0006529 (0.1%) "GO:0005829 (32.8%) GO:0005886 (0.1%)" "GO:0003921 (32.8%) GO:0005524 (32.8%) GO:0016740 (0.9%)" obsolete asparagine biosynthetic process (0.1%) "cytosol (32.8%) plasma membrane (0.1%)" "GMP synthase activity (32.8%) ATP binding (32.8%) transferase activity (0.9%)" "IPR014729 (13.7%) IPR025777 (13.7%) IPR001674 (13.5%)" "Rossmann-like alpha/beta/alpha sandwich fold (13.7%) GMP synthetase ATP pyrophosphatase domain (13.7%) GMP synthase, C-terminal (13.5%)" YDNSGDKDNQWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0000175 (58.3%) GO:0004519 (41.7%)" "3'-5'-RNA exonuclease activity (58.3%) endonuclease activity (41.7%)" "IPR005135 (33.3%) IPR036691 (33.3%) IPR050410 (33.3%)" "Endonuclease/exonuclease/phosphatase (33.3%) Endonuclease/exonuclease/phosphatase superfamily (33.3%) CCR4/nocturin mRNA turnover and transcription (33.3%)" NYDGLQNDLDKMEGVFLK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (21.6%) GO:0046034 (3.4%)" "GO:0005524 (25%) GO:0046961 (25%) GO:0046933 (21.6%)" "proton motive force-driven plasma membrane ATP synthesis (21.6%) ATP metabolic process (3.4%)" "ATP binding (25%) proton-transporting ATPase activity, rotational mechanism (25%) proton-transporting ATP synthase activity, rotational mechanism (21.6%)" "IPR000194 (13.8%) IPR004100 (13.8%) IPR020003 (13.8%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (13.8%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (13.8%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (13.8%)" NIPTVLFIKDGEVKDKTVGAVTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.8.4.2 (100%) protein-disulfide reductase (glutathione) (100%) GO:0045454 (33.3%) GO:0005829 (33.3%) "GO:0015035 (31%) GO:0019153 (2.4%)" cell redox homeostasis (33.3%) cytosol (33.3%) "protein-disulfide reductase activity (31%) protein-disulfide reductase (glutathione) activity (2.4%)" "IPR013766 (25.9%) IPR036249 (25.9%) IPR005746 (24.1%)" "Thioredoxin domain (25.9%) Thioredoxin-like superfamily (25.9%) Thioredoxin (24.1%)" AGLPLHTGFLNMFDHADNAFVSAFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.2.9 (100%) uracil phosphoribosyltransferase (100%) "GO:0005525 (47.4%) GO:0016757 (28.9%) GO:0004845 (23.7%)" "GTP binding (47.4%) glycosyltransferase activity (28.9%) uracil phosphoribosyltransferase activity (23.7%)" "IPR000836 (48.8%) IPR029057 (48.8%) IPR050137 (2.4%)" "Phosphoribosyltransferase domain (48.8%) Phosphoribosyltransferase-like (48.8%) PyrR bifunctional (2.4%)" ELTNQVPAPESMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) "GO:0005975 (25%) GO:0030203 (25%)" GO:0016020 (25%) GO:0004563 (25%) "carbohydrate metabolic process (25%) glycosaminoglycan metabolic process (25%)" membrane (25%) beta-N-acetylhexosaminidase activity (25%) "IPR011658 (16.7%) IPR015882 (16.7%) IPR015883 (16.7%)" "PA14 domain (16.7%) Beta-hexosaminidase, bacterial type, N-terminal (16.7%) Glycoside hydrolase family 20, catalytic domain (16.7%)" TTPSIIAYTQDGETLVGQPAKR root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0051301 (0.2%) GO:0006260 (0.1%) GO:0042026 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0005524 (26%) GO:0140662 (26%) GO:0051082 (24.7%)" "cell division (0.2%) DNA replication (0.1%) protein refolding (0.1%)" "cytosol (0.1%) cytoplasm (0%) plasma membrane (0%)" "ATP binding (26%) ATP-dependent protein folding chaperone (26%) unfolded protein binding (24.7%)" "IPR013126 (17.1%) IPR043129 (17.1%) IPR018181 (17%)" "Heat shock protein 70 family (17.1%) ATPase, nucleotide binding domain (17.1%) Heat shock protein 70, conserved site (17%)" ALKEPARPMVAIVGGSK root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.6%) GO:0006094 (16.6%) GO:0008615 (0%)" "GO:0005829 (16.6%) GO:0005737 (0%)" "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "glycolytic process (16.6%) gluconeogenesis (16.6%) pyridoxine biosynthetic process (0%)" "cytosol (16.6%) cytoplasm (0%)" "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (25.3%) IPR015824 (25.3%) IPR036043 (25.3%)" "Phosphoglycerate kinase (25.3%) Phosphoglycerate kinase, N-terminal (25.3%) Phosphoglycerate kinase superfamily (25.3%)" LFEEPLTALAFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" AMGIEPYPAAEYVTNAFSTDIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.6%) GO:0005829 (16.6%) "GO:0000049 (16.6%) GO:0004824 (16.6%) GO:0005524 (16.6%)" lysyl-tRNA aminoacylation (16.6%) cytosol (16.6%) "tRNA binding (16.6%) lysine-tRNA ligase activity (16.6%) ATP binding (16.6%)" "IPR002313 (12%) IPR004364 (12%) IPR004365 (12%)" "Lysine-tRNA ligase, class II (12%) Aminoacyl-tRNA synthetase, class II (D/K/N) (12%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (12%)" ELLLSDEYAEQKR root "GO:0006355 (24.7%) GO:0032297 (24%) GO:0005975 (0.2%)" "GO:0005737 (24.2%) GO:0005829 (0.3%) GO:0032991 (0.2%)" "GO:0043565 (24.3%) GO:0003677 (0.3%) GO:0000287 (0.2%)" "regulation of DNA-templated transcription (24.7%) negative regulation of DNA-templated DNA replication initiation (24%) carbohydrate metabolic process (0.2%)" "cytoplasm (24.2%) cytosol (0.3%) protein-containing complex (0.2%)" "sequence-specific DNA binding (24.3%) DNA binding (0.3%) magnesium ion binding (0.2%)" "IPR036835 (16.7%) IPR010985 (16.6%) IPR013321 (16.6%)" "Replication modulator SeqA, C-terminal DNA-binding domain superfamily (16.7%) Ribbon-helix-helix (16.6%) Arc-type ribbon-helix-helix (16.6%)" ALERGEGQPGDIETLEQLCR root "7.1.1.- (88%) 1.6.5.11 (6.6%) 1.6.5.9 (3.5%)" "Hydron translocation or charge separation linked to oxidoreductase reactions (88%) Transferred entry: 1.6.5.9 (6.6%) NADH:ubiquinone reductase (non-electrogenic) (3.5%)" "GO:0045333 (0.5%) GO:0009060 (0%) GO:0015980 (0%)" "GO:0005886 (0.6%) GO:0030964 (0%) GO:0045271 (0%)" "GO:0051539 (16.8%) GO:0008137 (16.7%) GO:0010181 (16.7%)" "cellular respiration (0.5%) aerobic respiration (0%) energy derivation by oxidation of organic compounds (0%)" "plasma membrane (0.6%) NADH dehydrogenase complex (0%) respiratory chain complex I (0%)" "4 iron, 4 sulfur cluster binding (16.8%) NADH dehydrogenase (ubiquinone) activity (16.7%) FMN binding (16.7%)" "IPR037207 (17.1%) IPR019575 (17%) IPR001949 (16.9%)" "NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily (17.1%) NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain (17%) NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site (16.9%)" GYVTDLFSDGEAGYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" EYNEGVNGLQIAESISSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.5%) GO:0005737 (16.5%) "GO:0000049 (16.5%) GO:0004829 (16.5%) GO:0005524 (16.5%)" threonyl-tRNA aminoacylation (16.5%) cytoplasm (16.5%) "tRNA binding (16.5%) threonine-tRNA ligase activity (16.5%) ATP binding (16.5%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" LSTEQVQVNVIHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (24.9%) "GO:0003743 (25.2%) GO:0003924 (24.9%) GO:0005525 (24.9%)" cytoplasm (24.9%) "translation initiation factor activity (25.2%) GTPase activity (24.9%) GTP binding (24.9%)" "IPR000178 (9.1%) IPR009000 (9.1%) IPR015760 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translation protein, beta-barrel domain superfamily (9.1%) Translation initiation factor IF- 2 (9.1%)" FGIATAADLGEAPYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.8.1.9 (100%) thioredoxin-disulfide reductase (NADPH) (100%) GO:0019430 (33.3%) GO:0005737 (33.3%) GO:0004791 (33.3%) removal of superoxide radicals (33.3%) cytoplasm (33.3%) thioredoxin-disulfide reductase (NADPH) activity (33.3%) "IPR005982 (20%) IPR008255 (20%) IPR023753 (20%)" "Thioredoxin reductase (20%) Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (20%) FAD/NAD(P)-binding domain (20%)" DVDKPFLMPVEDVFSITGR Bacteria Bacteria 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0006414 (0.1%) "GO:0005829 (18.4%) GO:0032045 (3.7%) GO:0005737 (0.2%)" "GO:0003746 (19%) GO:0005525 (19%) GO:0003924 (18.8%)" translational elongation (0.1%) "cytosol (18.4%) guanyl-nucleotide exchange factor complex (3.7%) cytoplasm (0.2%)" "translation elongation factor activity (19%) GTP binding (19%) GTPase activity (18.8%)" "IPR004161 (8.4%) IPR009000 (8.4%) IPR033720 (8.4%)" "Translation elongation factor EFTu-like, domain 2 (8.4%) Translation protein, beta-barrel domain superfamily (8.4%) Elongation factor Tu, domain 2 (8.4%)" TDKWHCQHAKPGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) LIESNTTIPTK root "GO:0005737 (16.1%) GO:0070013 (0.3%)" "GO:0005524 (28%) GO:0140662 (28%) GO:0051082 (27.6%)" "cytoplasm (16.1%) intracellular organelle lumen (0.3%)" "ATP binding (28%) ATP-dependent protein folding chaperone (28%) unfolded protein binding (27.6%)" "IPR013126 (16.7%) IPR018181 (16.7%) IPR029047 (16.7%)" "Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%) Heat shock protein 70kD, peptide-binding domain superfamily (16.7%)" TDALMLSGETAYGKYPVEAVK Pseudomonadati Bacteria Pseudomonadati 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (13.1%) "GO:0016301 (17.5%) GO:0000287 (17.3%) GO:0004743 (17.3%)" response to stress (13.1%) "kinase activity (17.5%) magnesium ion binding (17.3%) pyruvate kinase activity (17.3%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" RLEASLYTLQLPTEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR032286 (100%) Protein of unknown function DUF4837 (100%) LAYGSYENKEATLGMGGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (50%) GO:0015344 (50%) cell outer membrane (50%) siderophore uptake transmembrane transporter activity (50%) "IPR000531 (20%) IPR012910 (20%) IPR036942 (20%)" "TonB-dependent receptor-like, beta-barrel (20%) TonB-dependent receptor, plug domain (20%) TonB-dependent receptor-like, beta-barrel domain superfamily (20%)" GSALGALNGDAKWEEKVMELMEACDTWIPLPPR Parabacteroides johnsonii Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides johnsonii 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20%) "GO:0000287 (20%) GO:0003746 (20%) GO:0003924 (20%)" cytosol (20%) "magnesium ion binding (20%) translation elongation factor activity (20%) GTPase activity (20%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" AYPGDATVTVCHSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.5.4.9 (50.5%) 1.5.1.5 (49.5%)" "methenyltetrahydrofolate cyclohydrolase (50.5%) methylenetetrahydrofolate dehydrogenase (NADP(+)) (49.5%)" "GO:0035999 (15%) GO:0000105 (13.3%) GO:0006164 (13.3%)" GO:0005829 (15%) "GO:0004477 (15%) GO:0004488 (15%)" "tetrahydrofolate interconversion (15%) L-histidine biosynthetic process (13.3%) purine nucleotide biosynthetic process (13.3%)" cytosol (15%) "methenyltetrahydrofolate cyclohydrolase activity (15%) methylenetetrahydrofolate dehydrogenase (NADP+) activity (15%)" "IPR000672 (16.8%) IPR020631 (16.8%) IPR036291 (16.8%)" "Tetrahydrofolate dehydrogenase/cyclohydrolase (16.8%) Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (16.8%) NAD(P)-binding domain superfamily (16.8%)" AEQLINEALTNPETKDNAATWDVAGYIQKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" FLSQTSFSSQEDFVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.2.1.1 (100%) acetate--CoA ligase (100%) "GO:0006633 (16.7%) GO:0006637 (16.7%)" "GO:0004321 (16.7%) GO:0005524 (16.7%) GO:0015645 (16.7%)" "fatty acid biosynthetic process (16.7%) acyl-CoA metabolic process (16.7%)" "fatty-acyl-CoA synthase activity (16.7%) ATP binding (16.7%) fatty acid ligase activity (16.7%)" "IPR000873 (16.7%) IPR020845 (16.7%) IPR025110 (16.7%)" "AMP-dependent synthetase/ligase domain (16.7%) AMP-binding, conserved site (16.7%) AMP-binding enzyme, C-terminal domain (16.7%)" EKPAHLAQSIR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.1.3.15 (100%) glucose-6-phosphate 1-epimerase (100%) "GO:0005975 (25%) GO:0006974 (0.2%)" "GO:0005737 (24.7%) GO:0005829 (0.2%)" "GO:0030246 (25%) GO:0047938 (24.7%) GO:0003824 (0.3%)" "carbohydrate metabolic process (25%) DNA damage response (0.2%)" "cytoplasm (24.7%) cytosol (0.2%)" "carbohydrate binding (25%) glucose-6-phosphate 1-epimerase activity (24.7%) catalytic activity (0.3%)" "IPR011013 (25.4%) IPR014718 (25.4%) IPR008183 (25.1%)" "Galactose mutarotase-like domain superfamily (25.4%) Glycoside hydrolase-type carbohydrate-binding (25.4%) Aldose 1-/Glucose-6-phosphate 1-epimerase (25.1%)" TMADKLSAEIVDAFNNQGGAFKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (20%) GO:0015935 (20%) "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) small ribosomal subunit (20%) "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" AIGNNLVCVHVNHGLMR Bacteria Bacteria 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.1%) "GO:0003921 (33.1%) GO:0005524 (33.1%) GO:0016740 (0.7%)" cytosol (33.1%) "GMP synthase activity (33.1%) ATP binding (33.1%) transferase activity (0.7%)" "IPR001674 (16.7%) IPR014729 (16.7%) IPR017926 (16.7%)" "GMP synthase, C-terminal (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Glutamine amidotransferase (16.7%)" GGHSGLEINEGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) "GO:0006508 (25%) GO:0043171 (0.1%)" GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" "proteolysis (25%) peptide catabolic process (0.1%)" cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (31.1%) IPR002933 (31.1%) IPR011650 (31.1%)" "Peptidase M20C, Xaa-His dipeptidase (31.1%) Peptidase M20 (31.1%) Peptidase M20, dimerisation domain (31.1%)" ATHAVIGGEGNGGVIYPESHYGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.2.10 (78.6%) 5.4.2.2 (14.3%) 5.4.2.8 (7.1%)" "phosphoglucosamine mutase (78.6%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (14.3%) phosphomannomutase (7.1%)" "GO:0005975 (14.1%) GO:0006048 (14.1%) GO:0009252 (14.1%)" GO:0005829 (14.1%) "GO:0004615 (14.1%) GO:0008966 (14.1%) GO:0000287 (13.4%)" "carbohydrate metabolic process (14.1%) UDP-N-acetylglucosamine biosynthetic process (14.1%) peptidoglycan biosynthetic process (14.1%)" cytosol (14.1%) "phosphomannomutase activity (14.1%) phosphoglucosamine mutase activity (14.1%) magnesium ion binding (13.4%)" "IPR005845 (10.3%) IPR005846 (10.3%) IPR016055 (10.3%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (10.3%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (10.3%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (10.3%)" SSAIDIIVVDSVAALTPK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0006281 (13.3%) GO:0006310 (13.3%) GO:0009432 (10.6%)" GO:0005829 (13.3%) "GO:0003697 (13.3%) GO:0005524 (13.3%) GO:0140664 (13.3%)" "DNA repair (13.3%) DNA recombination (13.3%) SOS response (10.6%)" cytosol (13.3%) "single-stranded DNA binding (13.3%) ATP binding (13.3%) ATP-dependent DNA damage sensor activity (13.3%)" "IPR013765 (12.2%) IPR020588 (12.2%) IPR027417 (12.2%)" "DNA recombination and repair protein RecA (12.2%) DNA recombination and repair protein RecA-like, ATP-binding domain (12.2%) P-loop containing nucleoside triphosphate hydrolase (12.2%)" LQVFNPAVGVALKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0005737 (50%) GO:0042995 (50%)" "cytoplasm (50%) cell projection (50%)" "IPR011467 (33.3%) IPR013783 (33.3%) IPR053879 (33.3%)" "Protein of unknown function DUF1573 (33.3%) Immunoglobulin-like fold (33.3%) HYDIN/VesB/CFA65-like, Ig-like domain (33.3%)" VNQIGTLTETLDAIEMAKR Bacteria Bacteria 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.4%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.4%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" AEANLEDTLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR036291 (34.5%) IPR005886 (32.7%) IPR001509 (27.3%)" "NAD(P)-binding domain superfamily (34.5%) UDP-glucose 4-epimerase (32.7%) NAD-dependent epimerase/dehydratase (27.3%)" DNEHLMELLNSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043200 (33.3%) GO:0005829 (33.3%) GO:0043565 (33.3%) response to amino acid (33.3%) cytosol (33.3%) sequence-specific DNA binding (33.3%) "IPR011008 (17.4%) IPR019887 (17.4%) IPR000485 (16.3%)" "Dimeric alpha-beta barrel (17.4%) Transcription regulator AsnC/Lrp, ligand binding domain (17.4%) AsnC-type HTH domain (16.3%)" YAHIVTSTTHK root "2.1.2.1 (99.8%) 2.1.2.7 (0.2%)" "glycine hydroxymethyltransferase (99.8%) D-alanine 2-hydroxymethyltransferase (0.2%)" "GO:0019264 (15.8%) GO:0035999 (15.6%) GO:0032259 (10.2%)" "GO:0005829 (15.8%) GO:0016020 (0.1%) GO:0005737 (0%)" "GO:0004372 (15.8%) GO:0030170 (15.8%) GO:0008168 (10.2%)" "glycine biosynthetic process from serine (15.8%) tetrahydrofolate interconversion (15.6%) methylation (10.2%)" "cytosol (15.8%) membrane (0.1%) cytoplasm (0%)" "glycine hydroxymethyltransferase activity (15.8%) pyridoxal phosphate binding (15.8%) methyltransferase activity (10.2%)" "IPR019798 (14.3%) IPR039429 (14.3%) IPR049943 (14.3%)" "Serine hydroxymethyltransferase, pyridoxal phosphate binding site (14.3%) Serine hydroxymethyltransferase-like domain (14.3%) Serine hydroxymethyltransferase-like (14.3%)" EAPQTLAQEVDR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0071978 (25%) GO:0005886 (25%) "GO:0042802 (25%) GO:0042803 (25%)" bacterial-type flagellum-dependent swarming motility (25%) plasma membrane (25%) "identical protein binding (25%) protein homodimerization activity (25%)" IPR010352 (100%) Protein of unknown function DUF945 (100%) DYEHLGLNVIGVNAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33%) "GO:0003921 (33%) GO:0005524 (33%) GO:0008483 (0.9%)" cytosol (33%) "GMP synthase activity (33%) ATP binding (33%) transaminase activity (0.9%)" "IPR001674 (12.5%) IPR004739 (12.5%) IPR014729 (12.5%)" "GMP synthase, C-terminal (12.5%) GMP synthase, glutamine amidotransferase (12.5%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" LVHVSTDYVFSGR Bacillati Bacteria Bacillati 1.1.1.133 (100%) dTDP-4-dehydrorhamnose reductase (100%) GO:0019305 (33.3%) GO:0005829 (33.3%) GO:0008831 (33.3%) dTDP-rhamnose biosynthetic process (33.3%) cytosol (33.3%) dTDP-4-dehydrorhamnose reductase activity (33.3%) "IPR005913 (33.3%) IPR029903 (33.3%) IPR036291 (33.3%)" "dTDP-4-dehydrorhamnose reductase family (33.3%) RmlD-like substrate binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" GVMEEYGTVASVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0003723 (100%) RNA binding (100%) "IPR000504 (25%) IPR012677 (25%) IPR035979 (25%)" "RNA recognition motif domain (25%) Nucleotide-binding alpha-beta plait domain superfamily (25%) RNA-binding domain superfamily (25%)" AMDMMQTAQLLGFDTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25%) GO:0006099 (25%)" "GO:0004459 (25%) GO:0030060 (25%)" "lactate metabolic process (25%) tricarboxylic acid cycle (25%)" "L-lactate dehydrogenase (NAD+) activity (25%) L-malate dehydrogenase (NAD+) activity (25%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR011275 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 3 (16.7%)" MGIAVIMDIVHSHAVK Bacteria Bacteria 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) "GO:0005978 (19.9%) GO:0005975 (0.3%)" "GO:0005737 (20.1%) GO:0016020 (0.1%)" "GO:0003844 (20.1%) GO:0004553 (19.9%) GO:0043169 (19.6%)" "glycogen biosynthetic process (19.9%) carbohydrate metabolic process (0.3%)" "cytoplasm (20.1%) membrane (0.1%)" "1,4-alpha-glucan branching enzyme activity (20.1%) hydrolase activity, hydrolyzing O-glycosyl compounds (19.9%) cation binding (19.6%)" "IPR006047 (12.6%) IPR017853 (12.6%) IPR004193 (12.5%)" "Glycosyl hydrolase family 13, catalytic domain (12.6%) Glycoside hydrolase superfamily (12.6%) Glycoside hydrolase, family 13, N-terminal (12.5%)" GDVNELNVELEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (13.3%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (13.3%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" GNEIHTNGELPKVGTEAPDFKGVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" VVPVQYPLATGPNFNSLIDVLLMKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (24.9%) "GO:0003746 (25.3%) GO:0003924 (24.9%) GO:0005525 (24.9%)" ribosome disassembly (24.9%) "translation elongation factor activity (25.3%) GTPase activity (24.9%) GTP binding (24.9%)" "IPR000795 (7.6%) IPR005225 (7.6%) IPR027417 (7.6%)" "Translational (tr)-type GTP-binding domain (7.6%) Small GTP-binding domain (7.6%) P-loop containing nucleoside triphosphate hydrolase (7.6%)" KSNRPSDFIDALITLQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.1 (66.7%) 1.1.1.202 (33.3%)" "alcohol dehydrogenase (66.7%) 1,3-propanediol dehydrogenase (33.3%)" "GO:0004022 (48.3%) GO:0046872 (48.3%) GO:0047516 (3.4%)" "alcohol dehydrogenase (NAD+) activity (48.3%) metal ion binding (48.3%) 1,3-propanediol dehydrogenase activity (3.4%)" "IPR001670 (33.3%) IPR039697 (33.3%) IPR056798 (33.3%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (33.3%) Iron-type alcohol dehydrogenase-like (33.3%) Fe-containing alcohol dehydrogenase-like, C-terminal (33.3%)" GCGLCVQACPVK Bacillota Bacteria Bacillati Bacillota 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0006979 (16.3%) GO:0022900 (16.3%)" "GO:0005506 (16.3%) GO:0030976 (16.3%) GO:0051539 (16.3%)" "response to oxidative stress (16.3%) electron transport chain (16.3%)" "iron ion binding (16.3%) thiamine pyrophosphate binding (16.3%) 4 iron, 4 sulfur cluster binding (16.3%)" "IPR017896 (8.2%) IPR017900 (8.2%) IPR002869 (7.9%)" "4Fe-4S ferredoxin-type, iron-sulphur binding domain (8.2%) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (8.2%) Pyruvate-flavodoxin oxidoreductase, central domain (7.9%)" KVDKGTNFGIQPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" TIQNYLSDQIQVPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.5.1 (98%) 1.3.5.4 (2%)" "succinate dehydrogenase (98%) Transferred entry: 1.3.5.1 (2%)" GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (15.7%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (15.7%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" ASFYIHAIPQTPDAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.5.1.24 (80%) 3.5.1.- (20%)" "choloylglycine hydrolase (80%) In linear amides (20%)" "GO:0016787 (78.3%) GO:0045302 (21.7%)" "hydrolase activity (78.3%) choloylglycine hydrolase activity (21.7%)" "IPR029055 (33.3%) IPR029132 (33.3%) IPR052193 (33.3%)" "Nucleophile aminohydrolases, N-terminal (33.3%) Choloylglycine hydrolase/NAAA C-terminal (33.3%) Peptidase C59 family enzymes (33.3%)" KNFVIDTNVILHDYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (24.4%) IPR027417 (24.4%)" "PIN domain (25%) PhoH-like protein (24.4%) P-loop containing nucleoside triphosphate hydrolase (24.4%)" LNVPNLQFDAATGEYR Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus GO:0006412 (32.1%) "GO:0015934 (32.1%) GO:0005840 (3.8%)" GO:0003735 (32.1%) translation (32.1%) "large ribosomal subunit (32.1%) ribosome (3.8%)" structural constituent of ribosome (32.1%) "IPR002677 (33.3%) IPR011332 (33.3%) IPR044957 (33.3%)" "Large ribosomal subunit protein bL32 (33.3%) Zinc-binding ribosomal protein (33.3%) Large ribosomal subunit protein bL32, bacteria (33.3%)" ANHRPSELSGGER root "7.6.2.- (95.7%) 3.6.3.- (4.3%)" "Linked to the hydrolysis of a nucleoside triphosphate (95.7%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (4.3%)" "GO:0044874 (16.5%) GO:0089705 (16.4%) GO:0042953 (0.1%)" "GO:0005886 (16.4%) GO:0098797 (0.2%) GO:0043190 (0.1%)" "GO:0005524 (17%) GO:0016887 (16.7%) GO:0022857 (16.2%)" "lipoprotein localization to outer membrane (16.5%) protein localization to outer membrane (16.4%) lipoprotein transport (0.1%)" "plasma membrane (16.4%) plasma membrane protein complex (0.2%) ATP-binding cassette (ABC) transporter complex (0.1%)" "ATP binding (17%) ATP hydrolysis activity (16.7%) transmembrane transporter activity (16.2%)" "IPR003439 (14.6%) IPR027417 (14.6%) IPR015854 (14.2%)" "ABC transporter-like, ATP-binding domain (14.6%) P-loop containing nucleoside triphosphate hydrolase (14.6%) ABC transporter, lipoprotein release, LolD-like (14.2%)" FIQNLQAALIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0008270 (100%) zinc ion binding (100%) "IPR000962 (51.6%) IPR037187 (48.4%)" "Zinc finger, DksA/TraR C4-type (51.6%) DksA, N-terminal domain superfamily (48.4%)" VSFTADQIRDNAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (16.4%) GO:0006417 (16.4%)" "GO:0015934 (16.4%) GO:0005840 (0.8%) GO:1990904 (0.8%)" "GO:0000049 (16.4%) GO:0003735 (16.4%) GO:0019843 (16.4%)" "translation (16.4%) regulation of translation (16.4%)" "large ribosomal subunit (16.4%) ribosome (0.8%) ribonucleoprotein complex (0.8%)" "tRNA binding (16.4%) structural constituent of ribosome (16.4%) rRNA binding (16.4%)" "IPR016095 (16.9%) IPR023673 (16.9%) IPR023674 (16.9%)" "Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.9%) Large ribosomal subunit protein uL1, conserved site (16.9%) Ribosomal protein uL1-like (16.9%)" QTIVHGQGEFHLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.2%) "GO:0003746 (25.3%) GO:0005525 (25.2%) GO:0003924 (24.4%)" ribosome disassembly (25.2%) "translation elongation factor activity (25.3%) GTP binding (25.2%) GTPase activity (24.4%)" "IPR035647 (7.7%) IPR041095 (7.7%) IPR005517 (7.7%)" "EF-G domain III/V-like (7.7%) Elongation Factor G, domain II (7.7%) Translation elongation factor EFG/EF2, domain IV (7.7%)" AVTTPVVEVHISNVHAR Bacteroidota Bacteria Pseudomonadati Bacteroidota 4.2.1.10 (100%) 3-dehydroquinate dehydratase (100%) "GO:0019631 (20.7%) GO:0008652 (19.6%) GO:0009073 (19.6%)" GO:0003855 (20.7%) "quinate catabolic process (20.7%) amino acid biosynthetic process (19.6%) aromatic amino acid family biosynthetic process (19.6%)" 3-dehydroquinate dehydratase activity (20.7%) "IPR001874 (33.9%) IPR036441 (33.9%) IPR018509 (32.1%)" "Dehydroquinase, class II (33.9%) Dehydroquinase, class II superfamily (33.9%) Dehydroquinase, class II, conserved site (32.1%)" VVFAEGGHPNMLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (16.7%) "GO:0016746 (17.3%) GO:0046872 (17.3%) GO:0051287 (17.3%)" malate metabolic process (16.7%) "acyltransferase activity (17.3%) metal ion binding (17.3%) NAD binding (17.3%)" "IPR002505 (9.1%) IPR012301 (9.1%) IPR012302 (9.1%)" "Phosphate acetyl/butaryl transferase (9.1%) Malic enzyme, N-terminal domain (9.1%) Malic enzyme, NAD-binding (9.1%)" ENVICGHLIPAGTGQR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) GO:0000428 (17.4%) "GO:0003899 (17.1%) GO:0003677 (16.9%) GO:0000287 (15.3%)" DNA-templated transcription (16.9%) DNA-directed RNA polymerase complex (17.4%) "DNA-directed RNA polymerase activity (17.1%) DNA binding (16.9%) magnesium ion binding (15.3%)" "IPR007081 (9.3%) IPR045867 (9.3%) IPR007083 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.3%) DNA-directed RNA polymerase, subunit beta-prime (9.3%) RNA polymerase Rpb1, domain 4 (9.1%)" ATSSSSFLQCSSIIR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "1.5.1.38 (64%) 1.-.-.- (36%)" "FMN reductase (NADPH) (64%) Oxidoreductases (36%)" "GO:0005829 (0.5%) GO:0016020 (0.5%)" "GO:0016491 (73%) GO:0052873 (24.6%) GO:0003955 (0.5%)" "cytosol (0.5%) membrane (0.5%)" "oxidoreductase activity (73%) FMN reductase (NADPH) activity (24.6%) NAD(P)H dehydrogenase (quinone) activity (0.5%)" "IPR000415 (33.2%) IPR016446 (33.2%) IPR029479 (33.2%)" "Nitroreductase-like (33.2%) Flavin oxidoreductase Frp family (33.2%) Nitroreductase (33.2%)" YANADMADLER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.29 (99.2%) 2.3.1.50 (0.8%)" "glycine C-acetyltransferase (99.2%) serine C-palmitoyltransferase (0.8%)" "GO:0030148 (14%) GO:0019518 (13.8%) GO:0006567 (0.5%)" "GO:0005829 (14.3%) GO:0016020 (14%)" "GO:0008890 (14.3%) GO:0030170 (14.3%) GO:0004758 (7.6%)" "sphingolipid biosynthetic process (14%) L-threonine catabolic process to glycine (13.8%) L-threonine catabolic process (0.5%)" "cytosol (14.3%) membrane (14%)" "glycine C-acetyltransferase activity (14.3%) pyridoxal phosphate binding (14.3%) serine C-palmitoyltransferase activity (7.6%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" MNVDENDDVVGQFGIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.8.4.2 (100%) protein-disulfide reductase (glutathione) (100%) GO:0045454 (33.3%) GO:0005829 (33.3%) "GO:0015035 (27.8%) GO:0019153 (5.6%)" cell redox homeostasis (33.3%) cytosol (33.3%) "protein-disulfide reductase activity (27.8%) protein-disulfide reductase (glutathione) activity (5.6%)" "IPR013766 (27.3%) IPR036249 (27.3%) IPR005746 (22.7%)" "Thioredoxin domain (27.3%) Thioredoxin-like superfamily (27.3%) Thioredoxin (22.7%)" GASPDRAEALYDYFVER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "3.1.1.96 (58.9%) 3.1.1.- (39.9%) 3.1.-.- (1.3%)" "D-aminoacyl-tRNA deacylase (58.9%) Carboxylic ester hydrolases (39.9%) Acting on ester bonds (1.3%)" "GO:0019478 (16.1%) GO:0006399 (0.2%) GO:0009408 (0.2%)" GO:0005737 (17%) "GO:0051500 (17%) GO:0000049 (16.1%) GO:0043908 (16.1%)" "D-amino acid catabolic process (16.1%) tRNA metabolic process (0.2%) response to heat (0.2%)" cytoplasm (17%) "D-tyrosyl-tRNA(Tyr) deacylase activity (17%) tRNA binding (16.1%) Ser(Gly)-tRNA(Ala) hydrolase activity (16.1%)" "IPR003732 (50%) IPR023509 (50%)" "D-aminoacyl-tRNA deacylase DTD (50%) D-aminoacyl-tRNA deacylase-like superfamily (50%)" RIEAVTAEGAEQFVYAQQDLIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR002318 (9.1%) IPR003156 (9.1%) IPR009000 (9.1%)" "Alanine-tRNA ligase, class IIc (9.1%) DHHA1 domain (9.1%) Translation protein, beta-barrel domain superfamily (9.1%)" VRPEQGLLAMR root 1.1.1.85 (100%) 3-isopropylmalate dehydrogenase (100%) "GO:0009098 (19.9%) GO:0006097 (0.1%) GO:0006099 (0.1%)" GO:0005829 (19.9%) "GO:0000287 (19.9%) GO:0003862 (19.9%) GO:0051287 (19.9%)" "L-leucine biosynthetic process (19.9%) glyoxylate cycle (0.1%) tricarboxylic acid cycle (0.1%)" cytosol (19.9%) "magnesium ion binding (19.9%) 3-isopropylmalate dehydrogenase activity (19.9%) NAD binding (19.9%)" "IPR004429 (32.9%) IPR019818 (32.9%) IPR024084 (32.9%)" "Isopropylmalate dehydrogenase (32.9%) Isocitrate/isopropylmalate dehydrogenase, conserved site (32.9%) Isopropylmalate dehydrogenase-like domain (32.9%)" LAPTKEELYPNMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006353 (25%) GO:0031564 (25%)" GO:0005829 (25%) GO:0003723 (25%) "DNA-templated transcription termination (25%) transcription antitermination (25%)" cytosol (25%) RNA binding (25%) "IPR006027 (33.3%) IPR011605 (33.3%) IPR035926 (33.3%)" "NusB/RsmB/TIM44 (33.3%) NusB antitermination factor (33.3%) NusB-like superfamily (33.3%)" SYGNDNSYGGNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" VIYSSQAYDANAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" ESLHSYVNNINTIEGGTHEAGFR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (14.6%) GO:0006261 (10.2%)" "GO:0005737 (10.8%) GO:0005694 (10.2%)" "GO:0003677 (14.6%) GO:0005524 (14.6%) GO:0034335 (10.2%)" "DNA topological change (14.6%) DNA-templated DNA replication (10.2%)" "cytoplasm (10.8%) chromosome (10.2%)" "DNA binding (14.6%) ATP binding (14.6%) DNA negative supercoiling activity (10.2%)" "IPR000565 (8.2%) IPR001241 (8.2%) IPR006171 (8.2%)" "DNA topoisomerase, type IIA, subunit B (8.2%) DNA topoisomerase, type IIA (8.2%) TOPRIM domain (8.2%)" LVADSITSQLERR root "GO:0006412 (19.9%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (19.9%) GO:0005840 (0.3%) GO:0015934 (0.1%)" "GO:0003735 (20%) GO:0019843 (20%) GO:0003729 (19.7%)" "translation (19.9%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (19.9%) ribosome (0.3%) large ribosomal subunit (0.1%)" "structural constituent of ribosome (20%) rRNA binding (20%) mRNA binding (19.7%)" "IPR004044 (11.2%) IPR009019 (11.2%) IPR015946 (11.2%)" "K Homology domain, type 2 (11.2%) K homology domain superfamily, prokaryotic type (11.2%) K homology domain-like, alpha/beta (11.2%)" IKTLTTDTIIANSR Pseudomonadati Bacteria Pseudomonadati 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (12.4%) GO:0005737 (1.6%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (12.4%) cytoplasm (1.6%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25.1%) IPR006148 (25.1%) IPR037171 (25.1%)" "Glucosamine-6-phosphate isomerase (25.1%) Glucosamine/galactosamine-6-phosphate isomerase (25.1%) NagB/RpiA transferase-like (25.1%)" VLLVDNNGTVTVGAPTVEGAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.6%) "GO:0005737 (16.6%) GO:0005840 (16.6%) GO:1990904 (16.6%)" "GO:0003735 (16.6%) GO:0019843 (16.6%) GO:0016853 (0.7%)" translation (16.6%) "cytoplasm (16.6%) ribosome (16.6%) ribonucleoprotein complex (16.6%)" "structural constituent of ribosome (16.6%) rRNA binding (16.6%) isomerase activity (0.7%)" "IPR001787 (32.1%) IPR028909 (32.1%) IPR036164 (32.1%)" "Large ribosomal subunit protein bL21 (32.1%) Large ribosomal subunit protein bL21-like (32.1%) Large ribosomal subunit protein bL21-like superfamily (32.1%)" QYNPEFAKPYQEEFDNYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016020 (100%) membrane (100%) "IPR011990 (25%) IPR019734 (25%) IPR021280 (25%)" "Tetratricopeptide-like helical domain superfamily (25%) Tetratricopeptide repeat (25%) Protein O-mannosyl-transferase TMEM260-like (25%)" SELKPAGVFHFFNEICQVPRPSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" TVKVGELSYEGLELINAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" MLGYLMEKEVQAVDNILK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%)" GO:0005829 (16.5%) "GO:0004618 (16.5%) GO:0005524 (16.5%) GO:0043531 (16.5%)" "gluconeogenesis (16.5%) glycolytic process (16.5%)" cytosol (16.5%) "phosphoglycerate kinase activity (16.5%) ATP binding (16.5%) ADP binding (16.5%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" ELGAESAAEHHK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.2.10 (100%) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (100%) "GO:0008360 (14%) GO:0009252 (14%) GO:0051301 (14%)" GO:0005737 (14%) "GO:0005524 (14%) GO:0047480 (14%) GO:0008766 (2%)" "regulation of cell shape (14%) peptidoglycan biosynthetic process (14%) cell division (14%)" cytoplasm (14%) "ATP binding (14%) UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity (14%) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity (2%)" "IPR000713 (12.5%) IPR004101 (12.5%) IPR005863 (12.5%)" "Mur ligase, N-terminal catalytic domain (12.5%) Mur ligase, C-terminal (12.5%) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (12.5%)" TTILQIQNVPAGDSIGYSR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.1.1.1 (100%) alanine racemase (100%) GO:0030632 (19.8%) GO:0005829 (0.8%) "GO:0005524 (19.8%) GO:0008784 (19.8%) GO:0016881 (19.8%)" D-alanine biosynthetic process (19.8%) cytosol (0.8%) "ATP binding (19.8%) alanine racemase activity (19.8%) acid-amino acid ligase activity (19.8%)" "IPR000821 (10%) IPR001608 (10%) IPR009006 (10%)" "Alanine racemase (10%) Alanine racemase, N-terminal (10%) Alanine racemase/group IV decarboxylase, C-terminal (10%)" HNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006094 (19.9%) GO:0006096 (19.9%)" GO:0005829 (19.9%) "GO:0004332 (19.9%) GO:0008270 (19.9%) GO:0016829 (0.2%)" "gluconeogenesis (19.9%) glycolytic process (19.9%)" cytosol (19.9%) "fructose-bisphosphate aldolase activity (19.9%) zinc ion binding (19.9%) lyase activity (0.2%)" "IPR000771 (33.3%) IPR006411 (33.3%) IPR013785 (33.3%)" "Fructose-bisphosphate aldolase, class-II (33.3%) Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype (33.3%) Aldolase-type TIM barrel (33.3%)" VVYVCSPNNPTGQLINPQDFR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.6.1.9 (100%) histidinol-phosphate transaminase (100%) GO:0000105 (32.5%) GO:0005829 (0.1%) "GO:0030170 (33.2%) GO:0004400 (32.9%) GO:0008483 (1.2%)" L-histidine biosynthetic process (32.5%) cytosol (0.1%) "pyridoxal phosphate binding (33.2%) histidinol-phosphate transaminase activity (32.9%) transaminase activity (1.2%)" "IPR004839 (16.8%) IPR015421 (16.8%) IPR015424 (16.8%)" "Aminotransferase, class I/classII, large domain (16.8%) Pyridoxal phosphate-dependent transferase, major domain (16.8%) Pyridoxal phosphate-dependent transferase (16.8%)" EVQAVDNILKDIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%)" GO:0005829 (16.5%) "GO:0004618 (16.5%) GO:0005524 (16.5%) GO:0043531 (16.5%)" "gluconeogenesis (16.5%) glycolytic process (16.5%)" cytosol (16.5%) "phosphoglycerate kinase activity (16.5%) ATP binding (16.5%) ADP binding (16.5%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" VTASCDPTAHAEVSAIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.5.4.3 (85.7%) 3.5.4.- (14.3%)" "guanine deaminase (85.7%) In cyclic amidines (14.3%)" GO:0006152 (32%) "GO:0008270 (32%) GO:0047974 (32%) GO:0008892 (3.9%)" purine nucleoside catabolic process (32%) "zinc ion binding (32%) guanosine deaminase activity (32%) guanine deaminase activity (3.9%)" "IPR002125 (33.3%) IPR016192 (33.3%) IPR016193 (33.3%)" "Cytidine and deoxycytidylate deaminase domain (33.3%) APOBEC/CMP deaminase, zinc-binding (33.3%) Cytidine deaminase-like (33.3%)" QDVVTFNEKPVQIESK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" SAEEFDAKNEENNLSNMAGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (62.1%) "GO:0016853 (34.5%) GO:0003755 (3.4%)" plasma membrane (62.1%) "isomerase activity (34.5%) peptidyl-prolyl cis-trans isomerase activity (3.4%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" AKETDAELVMASDPDADRVGAAVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (24.3%) GO:0006166 (24.3%)" "GO:0000287 (24.3%) GO:0008973 (24.3%) GO:0004614 (2.9%)" "carbohydrate metabolic process (24.3%) purine ribonucleoside salvage (24.3%)" "magnesium ion binding (24.3%) phosphopentomutase activity (24.3%) phosphoglucomutase activity (2.9%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" GGSIPIISTFEQVLGIK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "3.4.13.- (70.7%) 3.5.1.18 (22%) 3.5.1.- (7.3%)" "Dipeptidases (70.7%) succinyl-diaminopimelate desuccinylase (22%) In linear amides (7.3%)" "GO:0046872 (49.7%) GO:0016787 (39.6%) GO:0016805 (7.6%)" "metal ion binding (49.7%) hydrolase activity (39.6%) dipeptidase activity (7.6%)" "IPR002933 (33.3%) IPR011650 (33.3%) IPR051458 (33.3%)" "Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%) Cytosolic and Metallo Dipeptidase (33.3%)" NAAPQQNAAAEAPAAAEAPAATETKE Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (19.4%) "GO:0022627 (19.4%) GO:0005840 (1.4%) GO:1990904 (1.4%)" "GO:0003729 (19.4%) GO:0003735 (19.4%) GO:0019843 (19.4%)" translation (19.4%) "cytosolic small ribosomal subunit (19.4%) ribosome (1.4%) ribonucleoprotein complex (1.4%)" "mRNA binding (19.4%) structural constituent of ribosome (19.4%) rRNA binding (19.4%)" "IPR036419 (11.9%) IPR001351 (11.1%) IPR004044 (11.1%)" "Ribosomal protein S3, C-terminal domain superfamily (11.9%) Small ribosomal subunit protein uS3, C-terminal (11.1%) K Homology domain, type 2 (11.1%)" VTLTTLSNYDAVIEEAVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25%) GO:0044205 (25%)" "GO:0000287 (25%) GO:0004588 (25%)" "pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" "magnesium ion binding (25%) orotate phosphoribosyltransferase activity (25%)" "IPR000836 (25%) IPR004467 (25%) IPR023031 (25%)" "Phosphoribosyltransferase domain (25%) Orotate phosphoribosyl transferase domain (25%) Orotate phosphoribosyltransferase (25%)" IVAALLEDNQTPEGIRIPK VDLDGNPCGELDEQHVEHAR root "GO:0010608 (24.7%) GO:0006974 (0.1%) GO:0007231 (0.1%)" GO:0005829 (24.7%) "GO:0033592 (24.7%) GO:0034057 (24.7%) GO:0003729 (0.1%)" "post-transcriptional regulation of gene expression (24.7%) DNA damage response (0.1%) osmosensory signaling pathway (0.1%)" cytosol (24.7%) "RNA strand annealing activity (24.7%) RNA strand-exchange activity (24.7%) mRNA binding (0.1%)" "IPR016103 (25.2%) IPR023529 (25.2%) IPR036442 (25.2%)" "ProQ/FinO domain (25.2%) RNA chaperone ProQ (25.2%) ProQ/FinO domain superfamily (25.2%)" TYYSITNQSPVSDEEIER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0034599 (33.3%) GO:0005737 (33.3%) GO:0016491 (33.3%) cellular response to oxidative stress (33.3%) cytoplasm (33.3%) oxidoreductase activity (33.3%) "IPR000415 (33.3%) IPR029479 (33.3%) IPR033877 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase Frm2/Hbn1-like (33.3%)" AAATQEMTLVDTPNAK root 6.1.1.15 (100%) proline--tRNA ligase (100%) "GO:0006433 (20%) GO:0006412 (0%) GO:0106074 (0%)" "GO:0005829 (20%) GO:0005737 (0%)" "GO:0004827 (20%) GO:0005524 (19.9%) GO:0002161 (19.7%)" "prolyl-tRNA aminoacylation (20%) translation (0%) aminoacyl-tRNA metabolism involved in translational fidelity (0%)" "cytosol (20%) cytoplasm (0%)" "proline-tRNA ligase activity (20%) ATP binding (19.9%) aminoacyl-tRNA deacylase activity (19.7%)" "IPR045864 (7.9%) IPR050062 (7.9%) IPR002314 (7.8%)" "Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (7.9%) Proline-tRNA synthetase (7.9%) Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.8%)" GQDLFAHINLIKGER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" ALNPERPVAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "1.2.7.1 (80%) 1.2.7.- (20%)" "pyruvate synthase (80%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (13%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (13%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" LVVEGINIVKK Bacteria Bacteria GO:0006412 (17.2%) "GO:0005840 (17.5%) GO:1990904 (17.2%) GO:0005829 (13.5%)" "GO:0003735 (17.2%) GO:0019843 (17.2%)" translation (17.2%) "ribosome (17.5%) ribonucleoprotein complex (17.2%) cytosol (13.5%)" "structural constituent of ribosome (17.2%) rRNA binding (17.2%)" "IPR003256 (14.4%) IPR008991 (14.4%) IPR014722 (14.4%)" "Large ribosomal subunit protein uL24 (14.4%) Translation protein SH3-like domain superfamily (14.4%) Large ribosomal subunit protein uL2, domain 2 (14.4%)" MYNDPALNPVLYGK Bacteroidota Bacteria Pseudomonadati Bacteroidota IPR025350 (100%) Protein of unknown function DUF4254 (100%) VGYPPLVTPFSQYVK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "6.4.1.7 (56.4%) 6.4.1.1 (25.6%) 4.1.1.112 (10.3%)" "2-oxoglutarate carboxylase (56.4%) pyruvate carboxylase (25.6%) oxaloacetate decarboxylase (10.3%)" GO:0006094 (12.9%) GO:0005737 (12.9%) "GO:0004736 (64.9%) GO:0034029 (6.5%) GO:0008948 (1.1%)" gluconeogenesis (12.9%) cytoplasm (12.9%) "pyruvate carboxylase activity (64.9%) 2-oxoglutarate carboxylase activity (6.5%) oxaloacetate decarboxylase activity (1.1%)" "IPR003379 (15.5%) IPR013785 (15.3%) IPR000891 (15.3%)" "Carboxylase, conserved domain (15.5%) Aldolase-type TIM barrel (15.3%) Pyruvate carboxyltransferase (15.3%)" LVKDYLDGVDVAEGELVVLENVR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.6%) GO:0006094 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "glycolytic process (16.6%) gluconeogenesis (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (25.1%) IPR015824 (25.1%) IPR036043 (25.1%)" "Phosphoglycerate kinase (25.1%) Phosphoglycerate kinase, N-terminal (25.1%) Phosphoglycerate kinase superfamily (25.1%)" HSQVFSTAEDNQSAVTIHVLQGER root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0051301 (0.2%) GO:0006260 (0.1%) GO:0042026 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0005524 (25.7%) GO:0140662 (25.7%) GO:0051082 (24.2%)" "cell division (0.2%) DNA replication (0.1%) protein refolding (0.1%)" "cytosol (0.1%) cytoplasm (0%) plasma membrane (0%)" "ATP binding (25.7%) ATP-dependent protein folding chaperone (25.7%) unfolded protein binding (24.2%)" "IPR013126 (17.1%) IPR029047 (17%) IPR029048 (16.8%)" "Heat shock protein 70 family (17.1%) Heat shock protein 70kD, peptide-binding domain superfamily (17%) Heat shock protein 70kD, C-terminal domain superfamily (16.8%)" TIEEQHDKYLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006457 (16.7%) GO:0005737 (16.7%) "GO:0000774 (16.7%) GO:0042803 (16.7%) GO:0051082 (16.7%)" protein folding (16.7%) cytoplasm (16.7%) "adenyl-nucleotide exchange factor activity (16.7%) protein homodimerization activity (16.7%) unfolded protein binding (16.7%)" "IPR000740 (33.3%) IPR009012 (33.3%) IPR013805 (33.3%)" "GrpE nucleotide exchange factor (33.3%) GrpE nucleotide exchange factor, head (33.3%) GrpE nucleotide exchange factor, coiled-coil (33.3%)" ESYKAQFGTEPAVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25.5%) GO:0005829 (25.5%) "GO:0070573 (25.5%) GO:0046872 (23.4%)" proteolysis (25.5%) cytosol (25.5%) "metallodipeptidase activity (25.5%) metal ion binding (23.4%)" "IPR001160 (26.1%) IPR002933 (26.1%) IPR011650 (23.9%)" "Peptidase M20C, Xaa-His dipeptidase (26.1%) Peptidase M20 (26.1%) Peptidase M20, dimerisation domain (23.9%)" SQTIDLTLDGLSCGHCVKR root "7.2.2.8 (97.5%) 3.6.3.- (1.4%) 3.6.3.4 (0.9%)" "P-type Cu(+) transporter (97.5%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (1.4%) Transferred entry: 7.2.2.9 (0.9%)" "GO:0055070 (11.1%) GO:0075523 (10.8%) GO:0060003 (10.8%)" "GO:0005886 (11%) GO:0005737 (10.8%) GO:0016020 (0.1%)" "GO:0005507 (11.1%) GO:0043682 (11.1%) GO:0005524 (10.8%)" "copper ion homeostasis (11.1%) viral translational frameshifting (10.8%) copper ion export (10.8%)" "plasma membrane (11%) cytoplasm (10.8%) membrane (0.1%)" "copper ion binding (11.1%) P-type divalent copper transporter activity (11.1%) ATP binding (10.8%)" "IPR006121 (8.7%) IPR036163 (8.7%) IPR017969 (8.6%)" "Heavy metal-associated domain, HMA (8.7%) Heavy metal-associated domain superfamily (8.7%) Heavy-metal-associated, conserved site (8.6%)" FQDFLKGEVR Bacteria Bacteria "1.2.7.1 (68%) 1.2.7.- (28%) 1.2.1.51 (4%)" "pyruvate synthase (68%) With an iron-sulfur protein as acceptor (28%) pyruvate dehydrogenase (NADP(+)) (4%)" "GO:0006979 (15.3%) GO:0022900 (14.3%) GO:0044281 (11.6%)" "GO:0030976 (14.5%) GO:0005506 (14.3%) GO:0051539 (14.3%)" "response to oxidative stress (15.3%) electron transport chain (14.3%) small molecule metabolic process (11.6%)" "thiamine pyrophosphate binding (14.5%) iron ion binding (14.3%) 4 iron, 4 sulfur cluster binding (14.3%)" "IPR029061 (8.2%) IPR050722 (8.1%) IPR011766 (7.7%)" "Thiamin diphosphate-binding fold (8.2%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (8.1%) Thiamine pyrophosphate enzyme, TPP-binding (7.7%)" NPADLKWDAIGAEYVVESTGLFLTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.1.- (93.8%) 1.2.1.12 (6.3%)" "With NAD(+) or NADP(+) as acceptor (93.8%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (6.3%)" GO:0006006 (25%) "GO:0050661 (25%) GO:0051287 (25%) GO:0004365 (18.1%)" glucose metabolic process (25%) "NADP binding (25%) NAD binding (25%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (18.1%)" "IPR006424 (17%) IPR020828 (17%) IPR020829 (17%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (17%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17%)" IKELNEAFMSDAALQIEKGNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0003677 (50%) GO:0030527 (50%)" "DNA binding (50%) structural constituent of chromatin (50%)" IPR010886 (100%) Histone H1-like Hc1 (100%) GVHILFDKENVANTLGEYIASKGLN Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (19.2%) GO:0006096 (19.2%) GO:0005975 (1.9%)" GO:0005829 (19.2%) "GO:0004619 (19.2%) GO:0030145 (19.2%) GO:0016853 (1.9%)" "glucose catabolic process (19.2%) glycolytic process (19.2%) carbohydrate metabolic process (1.9%)" cytosol (19.2%) "phosphoglycerate mutase activity (19.2%) manganese ion binding (19.2%) isomerase activity (1.9%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" TAQTPGGTGALR root "2.6.1.- (95.7%) 2.6.1.1 (4.1%) 2.6.1.57 (0.1%)" "Transaminases (95.7%) aspartate transaminase (4.1%) aromatic-amino-acid transaminase (0.1%)" "GO:0033585 (16.6%) GO:0009094 (0%)" "GO:0005829 (16.6%) GO:0005737 (0%)" "GO:0004838 (16.6%) GO:0030170 (16.6%) GO:0004069 (16.6%)" "L-phenylalanine biosynthetic process from chorismate via phenylpyruvate (16.6%) L-phenylalanine biosynthetic process (0%)" "cytosol (16.6%) cytoplasm (0%)" "L-tyrosine-2-oxoglutarate transaminase activity (16.6%) pyridoxal phosphate binding (16.6%) L-aspartate:2-oxoglutarate aminotransferase activity (16.6%)" "IPR000796 (17.3%) IPR004839 (17.3%) IPR015421 (17.3%)" "Aspartate/other aminotransferase (17.3%) Aminotransferase, class I/classII, large domain (17.3%) Pyridoxal phosphate-dependent transferase, major domain (17.3%)" GLLKHPLTDSGLATFLADYKK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (16.8%) GO:0006098 (16.8%) GO:0042182 (16.1%)" GO:0005737 (16.8%) "GO:0004801 (16.8%) GO:0016832 (16.8%)" "carbohydrate metabolic process (16.8%) pentose-phosphate shunt (16.8%) ketone catabolic process (16.1%)" cytoplasm (16.8%) "transaldolase activity (16.8%) aldehyde-lyase activity (16.8%)" "IPR013785 (17.2%) IPR001585 (16.6%) IPR004731 (16.6%)" "Aldolase-type TIM barrel (17.2%) Transaldolase/Fructose-6-phosphate aldolase (16.6%) Transaldolase type 3B/Fructose-6-phosphate aldolase (16.6%)" VGALLTDIFAGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (25.3%) IPR022615 (25.3%) IPR056148 (25.3%)" "Na(+)-translocating NADH-quinone reductase subunit A (25.3%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (25.3%) NqrA, second alpha/beta domain (25.3%)" CVNMVADLWHAPAPK root 4.1.1.15 (100%) glutamate decarboxylase (100%) "GO:0006538 (21.7%) GO:0051454 (12.5%)" "GO:0005829 (21.7%) GO:0016020 (0.1%)" "GO:0004351 (21.7%) GO:0030170 (21.7%) GO:0016829 (0.4%)" "L-glutamate catabolic process (21.7%) intracellular pH elevation (12.5%)" "cytosol (21.7%) membrane (0.1%)" "glutamate decarboxylase activity (21.7%) pyridoxal phosphate binding (21.7%) lyase activity (0.4%)" "IPR002129 (21.4%) IPR010107 (21.4%) IPR015421 (21.4%)" "Pyridoxal phosphate-dependent decarboxylase (21.4%) Glutamate decarboxylase (21.4%) Pyridoxal phosphate-dependent transferase, major domain (21.4%)" SSFNRPNLYYEVR root "5.6.2.4 (93.8%) 3.6.4.12 (5.5%) 3.6.1.- (0.3%)" "DNA 3'-5' helicase (93.8%) DNA helicase (5.5%) In phosphorus-containing anhydrides (0.3%)" "GO:0006260 (5.7%) GO:0006310 (5.7%) GO:0006281 (5.5%)" "GO:0005737 (8.9%) GO:0030894 (5.5%) GO:0043590 (5.5%)" "GO:0005524 (9%) GO:0009378 (8.9%) GO:0043138 (8.9%)" "DNA replication (5.7%) DNA recombination (5.7%) DNA repair (5.5%)" "cytoplasm (8.9%) replisome (5.5%) bacterial nucleoid (5.5%)" "ATP binding (9%) four-way junction helicase activity (8.9%) 3'-5' DNA helicase activity (8.9%)" "IPR014001 (9.4%) IPR004589 (9.4%) IPR027417 (9.4%)" "Helicase superfamily 1/2, ATP-binding domain (9.4%) DNA helicase, ATP-dependent, RecQ type (9.4%) P-loop containing nucleoside triphosphate hydrolase (9.4%)" VYRNEAISYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004826 (16.7%) GO:0005524 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) phenylalanine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002319 (14.5%) IPR006195 (14.5%) IPR045864 (14.5%)" "Phenylalanyl-tRNA synthetase (14.5%) Aminoacyl-tRNA synthetase, class II (14.5%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.5%)" YDVNEGDVFFLPAGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (17.2%) IPR014628 (17.2%) IPR014710 (17.2%)" "RmlC-like cupin domain superfamily (17.2%) Mannose-6-phosphate isomerase, Firmicutes type, short form (17.2%) RmlC-like jelly roll fold (17.2%)" SAVGYQPTLATEMGR Bacteria Bacteria "7.1.2.2 (98.6%) 3.6.3.14 (1.4%)" "H(+)-transporting two-sector ATPase (98.6%) Transferred entry: 7.1.2.2 (1.4%)" "GO:0045259 (23.3%) GO:0005886 (23%)" "GO:0005524 (23.3%) GO:0046933 (23.3%) GO:0016787 (7.1%)" "proton-transporting ATP synthase complex (23.3%) plasma membrane (23%)" "ATP binding (23.3%) proton-transporting ATP synthase activity, rotational mechanism (23.3%) hydrolase activity (7.1%)" "IPR000194 (10.3%) IPR027417 (10.3%) IPR050053 (10.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.3%) P-loop containing nucleoside triphosphate hydrolase (10.3%) ATPase alpha/beta chains (10.3%)" ELGLDAIHDTVHEMAKDEAR Bacillota Bacteria Bacillati Bacillota 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (50%) GO:0004601 (27.8%) GO:0016491 (13.9%)" "iron ion binding (50%) peroxidase activity (27.8%) oxidoreductase activity (13.9%)" "IPR003251 (12.5%) IPR009040 (12.5%) IPR009078 (12.5%)" "Rubrerythrin, diiron-binding domain (12.5%) Ferritin-like diiron domain (12.5%) Ferritin-like superfamily (12.5%)" MFQQEVTITAPNGLHTRPAAQFVK root "2.7.11.- (75%) 2.7.3.9 (25%)" "Protein-serine/threonine kinases (75%) phosphoenolpyruvate--protein phosphotransferase (25%)" "GO:0009401 (44.7%) GO:0043609 (0.1%) GO:0045819 (0.1%)" "GO:0005737 (44.6%) GO:0005829 (0.1%)" "GO:0016740 (9.9%) GO:0008965 (0.2%) GO:0004857 (0.1%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (44.7%) regulation of carbon utilization (0.1%) positive regulation of glycogen catabolic process (0.1%)" "cytoplasm (44.6%) cytosol (0.1%)" "transferase activity (9.9%) phosphoenolpyruvate-protein phosphotransferase activity (0.2%) enzyme inhibitor activity (0.1%)" "IPR000032 (20%) IPR001020 (20%) IPR035895 (20%)" "Phosphocarrier protein HPr-like (20%) Phosphotransferase system, HPr histidine phosphorylation site (20%) HPr-like superfamily (20%)" YLEYPEFEEYIAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) GO:0042777 (24.7%) "GO:0005524 (24.7%) GO:0046933 (24.7%) GO:0046961 (24.7%)" proton motive force-driven plasma membrane ATP synthesis (24.7%) "ATP binding (24.7%) proton-transporting ATP synthase activity, rotational mechanism (24.7%) proton-transporting ATPase activity, rotational mechanism (24.7%)" "IPR000194 (14%) IPR004100 (14%) IPR020003 (14%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (14%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (14%)" AAELSGDFEELMALADKYTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" HSPEVEEADLTNLCLDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.1%) IPR006101 (7.1%) IPR006102 (7.1%)" "Beta galactosidase small chain/ domain 5 (7.1%) Glycoside hydrolase, family 2 (7.1%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.1%)" KKMEQKDELTNSGQR Phocaeicola vulgatus Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus IGSDAYNQGLSER Bacteria Bacteria "GO:0034220 (16.6%) GO:0006811 (7.6%) GO:0006974 (0.2%)" "GO:0009279 (25%) GO:0046930 (24.2%) GO:0016020 (0.2%)" "GO:0015288 (24.2%) GO:0005509 (0.6%) GO:0015075 (0.2%)" "monoatomic ion transmembrane transport (16.6%) monoatomic ion transport (7.6%) DNA damage response (0.2%)" "cell outer membrane (25%) pore complex (24.2%) membrane (0.2%)" "porin activity (24.2%) calcium ion binding (0.6%) monoatomic ion transmembrane transporter activity (0.2%)" "IPR006664 (12.9%) IPR006665 (12.9%) IPR036737 (12.9%)" "Outer membrane protein, bacterial (12.9%) OmpA-like domain (12.9%) OmpA-like domain superfamily (12.9%)" SYFAHATSPLTGFLEASA Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.8.1.10 (100%) thiazole synthase (100%) "GO:0009229 (32.3%) GO:0009228 (6.2%)" "GO:0005737 (24.6%) GO:0005829 (1.5%) GO:1902508 (1.5%)" "GO:1990107 (27.7%) GO:0016783 (4.6%) GO:0016740 (1.5%)" "thiamine diphosphate biosynthetic process (32.3%) thiamine biosynthetic process (6.2%)" "cytoplasm (24.6%) cytosol (1.5%) 2-iminoacetate synthase complex (1.5%)" "thiazole synthase activity (27.7%) sulfurtransferase activity (4.6%) transferase activity (1.5%)" "IPR008867 (33.3%) IPR013785 (33.3%) IPR033983 (33.3%)" "Thiazole synthase (33.3%) Aldolase-type TIM barrel (33.3%) Thiazole synthase ThiG (33.3%)" AGETLLPELASK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.13 (100%) mannose-1-phosphate guanylyltransferase (100%) GO:0009298 (30.2%) "GO:0004475 (30.2%) GO:0005525 (30.2%) GO:0016853 (5.7%)" GDP-mannose biosynthetic process (30.2%) "mannose-1-phosphate guanylyltransferase (GTP) activity (30.2%) GTP binding (30.2%) isomerase activity (5.7%)" "IPR005835 (25%) IPR029044 (25%) IPR049577 (25%)" "Nucleotidyl transferase domain (25%) Nucleotide-diphospho-sugar transferases (25%) GDP-mannose pyrophosphorylase, N-terminal domain (25%)" KTVTLPDELIGLVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006207 (21.2%) GO:0006221 (21.2%)" GO:0009347 (21.2%) "GO:0046872 (21.2%) GO:0016740 (15.2%)" "'de novo' pyrimidine nucleobase biosynthetic process (21.2%) pyrimidine nucleotide biosynthetic process (21.2%)" aspartate carbamoyltransferase complex (21.2%) "metal ion binding (21.2%) transferase activity (15.2%)" "IPR002801 (20%) IPR020542 (20%) IPR020545 (20%)" "Aspartate transcarbamylase regulatory subunit (20%) Aspartate carbamoyltransferase regulatory subunit, C-terminal (20%) Aspartate carbamoyltransferase regulatory subunit, N-terminal (20%)" IDAEAAEEAPKRER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" AIESLDGLKGENDDETTGIAIIKR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" YYKPENAVER Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.9%) GO:0006044 (32.9%)" "GO:0004342 (32.9%) GO:0016853 (1.4%)" "carbohydrate metabolic process (32.9%) N-acetylglucosamine metabolic process (32.9%)" "glucosamine-6-phosphate deaminase activity (32.9%) isomerase activity (1.4%)" "IPR003737 (14.9%) IPR004547 (14.9%) IPR006148 (14.9%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.9%) Glucosamine-6-phosphate isomerase (14.9%) Glucosamine/galactosamine-6-phosphate isomerase (14.9%)" AGYTDLEIFGYREDTGKFGDYNPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR013022 (33.3%) IPR036237 (33.3%) IPR050312 (33.3%)" "Xylose isomerase-like, TIM barrel domain (33.3%) Xylose isomerase-like superfamily (33.3%) IolE/XylA/MocC-like (33.3%)" TSHEIQKIEMLENEDLAPLVDQEALAEFR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.7.1 (72.7%) 1.2.7.- (27.3%)" "pyruvate synthase (72.7%) With an iron-sulfur protein as acceptor (27.3%)" "GO:0006979 (15%) GO:0022900 (15%) GO:0044281 (10%)" "GO:0005506 (15%) GO:0030976 (15%) GO:0051539 (15%)" "response to oxidative stress (15%) electron transport chain (15%) small molecule metabolic process (10%)" "iron ion binding (15%) thiamine pyrophosphate binding (15%) 4 iron, 4 sulfur cluster binding (15%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" MLSQENQDIILMDPNEERLNFSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005886 (50%) GO:0015079 (50%) plasma membrane (50%) potassium ion transmembrane transporter activity (50%) "IPR003148 (16.7%) IPR006036 (16.7%) IPR006037 (16.7%)" "Regulator of K+ conductance, N-terminal lobe (16.7%) Potassium uptake protein TrkA (16.7%) Regulator of K+ conductance, C-terminal (16.7%)" MKQTINPIGQEINTLGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011051 (33.3%) IPR013096 (33.3%) IPR014710 (33.3%)" "RmlC-like cupin domain superfamily (33.3%) Cupin 2, conserved barrel (33.3%) RmlC-like jelly roll fold (33.3%)" MQVSVETTQGLGR root "5.2.1.8 (99.9%) 3.4.21.92 (0.1%)" "peptidylprolyl isomerase (99.9%) endopeptidase Clp (0.1%)" "GO:0015031 (12.5%) GO:0043335 (12.4%) GO:0051083 (12.4%)" "GO:0005737 (12.1%) GO:0005759 (0%) GO:0005829 (0%)" "GO:0003755 (12.5%) GO:0043022 (12.4%) GO:0044183 (12.4%)" "protein transport (12.5%) protein unfolding (12.4%) 'de novo' cotranslational protein folding (12.4%)" "cytoplasm (12.1%) mitochondrial matrix (0%) cytosol (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.5%) ribosome binding (12.4%) protein folding chaperone (12.4%)" "IPR008881 (12.7%) IPR036611 (12.7%) IPR005215 (12.6%)" "Trigger factor, ribosome-binding, bacterial (12.7%) Trigger factor ribosome-binding domain superfamily (12.7%) Trigger factor (12.6%)" LAEAGIPTQMER Bacteria Bacteria 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) "GO:0006189 (20%) GO:0009236 (19.3%) GO:0006164 (0.1%)" "GO:0005829 (20.1%) GO:0016020 (0%)" "GO:0004639 (20.1%) GO:0005524 (20.1%) GO:0016874 (0.2%)" "'de novo' IMP biosynthetic process (20%) cobalamin biosynthetic process (19.3%) purine nucleotide biosynthetic process (0.1%)" "cytosol (20.1%) membrane (0%)" "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (20.1%) ATP binding (20.1%) ligase activity (0.2%)" "IPR028923 (20.3%) IPR050089 (20.3%) IPR018236 (20.2%)" "SAICAR synthetase/ADE2, N-terminal (20.3%) SAICAR synthetase (20.3%) SAICAR synthetase, conserved site (20.2%)" HSLSNSGSFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" DGNPVASFTVDSYNTIVSPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR024620 (100%) Domain of unknown function DUF3869 (100%) IVSFINTTEDPSVER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (30.5%) GO:1902600 (30.5%)" "GO:0005524 (30.5%) GO:0016787 (8.4%)" "ATP metabolic process (30.5%) proton transmembrane transport (30.5%)" "ATP binding (30.5%) hydrolase activity (8.4%)" "IPR000194 (20.1%) IPR004100 (20.1%) IPR022879 (20.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (20.1%) V-type ATP synthase regulatory subunit B/beta (20.1%)" NLSNLKPAEGSTK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) "GO:0022625 (25%) GO:0005840 (0.2%)" "GO:0003735 (25%) GO:0019843 (24.8%)" translation (25%) "cytosolic large ribosomal subunit (25%) ribosome (0.2%)" "structural constituent of ribosome (25%) rRNA binding (24.8%)" "IPR005749 (20%) IPR021131 (20%) IPR030878 (20%)" "Large ribosomal subunit protein uL15, bacteria (20%) Large ribosomal subunit protein uL15/eL18 (20%) Large ribosomal subunit protein uL15 (20%)" NKDGVPAVVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0002181 (19.9%) "GO:0015934 (19.9%) GO:0005840 (0.2%)" "GO:0003735 (19.9%) GO:0016740 (19.9%) GO:0019843 (18.5%)" cytoplasmic translation (19.9%) "large ribosomal subunit (19.9%) ribosome (0.2%)" "structural constituent of ribosome (19.9%) transferase activity (19.9%) rRNA binding (18.5%)" "IPR002171 (11.1%) IPR005880 (11.1%) IPR008991 (11.1%)" "Large ribosomal subunit protein uL2 (11.1%) Large ribosomal subunit protein uL2, bacteria/organella (11.1%) Translation protein SH3-like domain superfamily (11.1%)" GLIEGLAAEKHEAGSIAQK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016485 (25%) GO:0005886 (25%) "GO:0004222 (25%) GO:0046872 (25%)" protein processing (25%) plasma membrane (25%) "metalloendopeptidase activity (25%) metal ion binding (25%)" "IPR000718 (20%) IPR008753 (20%) IPR018497 (20%)" "Peptidase M13 (20%) Peptidase M13, N-terminal domain (20%) Peptidase M13, C-terminal domain (20%)" AVAINDYKDVAYFEPFYLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.3.1.234 (100%) N(6)-L-threonylcarbamoyladenine synthase (100%) "GO:0002949 (38.9%) GO:0006508 (8.3%)" GO:0005829 (38.9%) "GO:0008233 (8.3%) GO:0016740 (2.8%) GO:0016746 (2.8%)" "tRNA threonylcarbamoyladenosine modification (38.9%) proteolysis (8.3%)" cytosol (38.9%) "peptidase activity (8.3%) transferase activity (2.8%) acyltransferase activity (2.8%)" "IPR000905 (33.3%) IPR022496 (33.3%) IPR043129 (33.3%)" "Gcp-like domain (33.3%) tRNA threonylcarbamoyl adenosine modification protein TsaB (33.3%) ATPase, nucleotide binding domain (33.3%)" LVVDTIENHPSAPLQYTYDLNDPIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.3 (100%) formate--tetrahydrofolate ligase (100%) GO:0035999 (33.3%) "GO:0004329 (33.3%) GO:0005524 (33.3%)" tetrahydrofolate interconversion (33.3%) "formate-tetrahydrofolate ligase activity (33.3%) ATP binding (33.3%)" "IPR000559 (33.3%) IPR020628 (33.3%) IPR027417 (33.3%)" "Formate-tetrahydrofolate ligase, FTHFS (33.3%) Formate-tetrahydrofolate ligase, FTHFS, conserved site (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" GWTVDDTIAQPEASAIAVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (19.4%) GO:0005829 (19.4%) "GO:0002161 (20.4%) GO:0004832 (20.4%) GO:0005524 (20.4%)" valyl-tRNA aminoacylation (19.4%) cytosol (19.4%) "aminoacyl-tRNA deacylase activity (20.4%) valine-tRNA ligase activity (20.4%) ATP binding (20.4%)" "IPR001412 (9.1%) IPR002300 (9.1%) IPR002303 (9.1%)" "Aminoacyl-tRNA synthetase, class I, conserved site (9.1%) Aminoacyl-tRNA synthetase, class Ia (9.1%) Valine-tRNA ligase (9.1%)" IINSSTSATTEDKKK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae AVIESENSAERDQLLENLQEGMEVK root "GO:0006412 (24.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.6%) GO:0005840 (0.5%) GO:1990904 (0.1%)" "GO:0003735 (24.8%) GO:0003729 (24.7%) GO:0016491 (0.1%)" "translation (24.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.6%) ribosome (0.5%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.8%) mRNA binding (24.7%) oxidoreductase activity (0.1%)" "IPR003029 (20.2%) IPR012340 (20.2%) IPR050437 (20.2%)" "S1 domain (20.2%) Nucleic acid-binding, OB-fold (20.2%) Small ribosomal subunit protein bS1-like (20.2%)" VELPAMMVPDEIKDNLVDAIYACQNGVMR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" TYSEVIGNIQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0046872 (14.3%) GO:0005524 (14.1%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) metal ion binding (14.3%) ATP binding (14.1%)" "IPR000023 (25.1%) IPR022953 (25.1%) IPR035966 (25.1%)" "Phosphofructokinase domain (25.1%) ATP-dependent 6-phosphofructokinase (25.1%) Phosphofructokinase superfamily (25.1%)" DTASSHERIFFVEVMGR Bacteria Bacteria 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0016208 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) AMP binding (9.1%)" "IPR000023 (16.8%) IPR012003 (16.8%) IPR015912 (16.8%)" "Phosphofructokinase domain (16.8%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (16.8%) Phosphofructokinase, conserved site (16.8%)" AKPGQDFFPLTVNYQER root 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.3%) GO:0006396 (13.9%) GO:0006401 (0%)" "GO:0005829 (14.3%) GO:0016020 (0%) GO:1990061 (0%)" "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "mRNA catabolic process (14.3%) RNA processing (13.9%) RNA catabolic process (0%)" "cytosol (14.3%) membrane (0%) bacterial degradosome (0%)" "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8%) IPR012162 (8%) IPR020568 (8%)" "Exoribonuclease, phosphorolytic domain 1 (8%) Polyribonucleotide nucleotidyltransferase (8%) Ribosomal protein uS5 domain 2-type superfamily (8%)" GIEKNDVESIVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.4.1.21 (100%) starch synthase (100%) "GO:0016757 (83.3%) GO:0009011 (16.7%)" "glycosyltransferase activity (83.3%) alpha-1,4-glucan glucosyltransferase (ADP-glucose donor) activity (16.7%)" IPR013534 (100%) Starch synthase, catalytic domain (100%) VNMLGMPLPNEEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.5%) GO:0043335 (16.5%) GO:0051083 (16.5%)" "GO:0003755 (16.5%) GO:0043022 (16.5%) GO:0044183 (16.5%)" "protein transport (16.5%) protein unfolding (16.5%) 'de novo' cotranslational protein folding (16.5%)" "peptidyl-prolyl cis-trans isomerase activity (16.5%) ribosome binding (16.5%) protein folding chaperone (16.5%)" "IPR005215 (20.3%) IPR008881 (20.3%) IPR036611 (20.3%)" "Trigger factor (20.3%) Trigger factor, ribosome-binding, bacterial (20.3%) Trigger factor ribosome-binding domain superfamily (20.3%)" AKTEELKEYIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (10.9%) GO:0017038 (10.9%) GO:0043952 (10.9%)" "GO:0005829 (10.9%) GO:0005886 (10.9%) GO:0031522 (10.9%)" "GO:0005524 (10.9%) GO:0046872 (10.9%) GO:0004386 (0.8%)" "protein targeting (10.9%) protein import (10.9%) protein transport by the Sec complex (10.9%)" "cytosol (10.9%) plasma membrane (10.9%) cell envelope Sec protein transport complex (10.9%)" "ATP binding (10.9%) metal ion binding (10.9%) helicase activity (0.8%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" GHAGHPENERCDELAR root 3.1.26.4 (100%) ribonuclease H (100%) "GO:0043137 (19.8%) GO:0006401 (0%)" "GO:0005737 (19.6%) GO:0016020 (0.9%)" "GO:0003676 (20%) GO:0004523 (20%) GO:0000287 (19.5%)" "DNA replication, removal of RNA primer (19.8%) RNA catabolic process (0%)" "cytoplasm (19.6%) membrane (0.9%)" "nucleic acid binding (20%) RNA-DNA hybrid ribonuclease activity (20%) magnesium ion binding (19.5%)" "IPR002156 (20.1%) IPR012337 (20.1%) IPR036397 (20.1%)" "Ribonuclease H domain (20.1%) Ribonuclease H-like superfamily (20.1%) Ribonuclease H superfamily (20.1%)" IKSYGGVDLFMGGIGPDGHIAFNEPGSSLSSR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (12.2%) GO:0005737 (2%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (12.2%) cytoplasm (2%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" VDSDVIDHLIAKEER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005524 (24.3%) GO:0016887 (24.3%) GO:0051082 (24.3%)" "ATP binding (24.3%) ATP hydrolysis activity (24.3%) unfolded protein binding (24.3%)" "IPR001404 (20.7%) IPR020568 (20.7%) IPR019805 (19.5%)" "Heat shock protein Hsp90 family (20.7%) Ribosomal protein uS5 domain 2-type superfamily (20.7%) Heat shock protein Hsp90, conserved site (19.5%)" MGVASIQALLEGQR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0016208 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) AMP binding (9.1%)" "IPR000023 (16.7%) IPR012003 (16.7%) IPR012828 (16.7%)" "Phosphofructokinase domain (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic (16.7%)" DVSGEGVQQGLLK root "3.4.21.92 (88.9%) 7.1.2.2 (11.1%)" "endopeptidase Clp (88.9%) H(+)-transporting two-sector ATPase (11.1%)" "GO:0051603 (10.6%) GO:0051301 (9.5%) GO:0030150 (0%)" "GO:0009376 (9.5%) GO:0005759 (0.7%) GO:0009536 (0.1%)" "GO:0005524 (10.6%) GO:0016887 (10.6%) GO:0051082 (9.9%)" "proteolysis involved in protein catabolic process (10.6%) cell division (9.5%) protein import into mitochondrial matrix (0%)" "HslUV protease complex (9.5%) mitochondrial matrix (0.7%) plastid (0.1%)" "ATP binding (10.6%) ATP hydrolysis activity (10.6%) unfolded protein binding (9.9%)" "IPR003959 (11.4%) IPR050052 (11.3%) IPR027417 (11.3%)" "ATPase, AAA-type, core (11.4%) ATP-dependent Clp protease ATP-binding subunit ClpX (11.3%) P-loop containing nucleoside triphosphate hydrolase (11.3%)" DAIPATANQILQGITR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" IGDTTITEIENRFNER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (25%) IPR018211 (25%) IPR044731 (25%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (25%) Alcohol dehydrogenase, iron-type, conserved site (25%) Butanol dehydrogenase-like (25%)" VFMLTIGNLAMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (24.6%) "GO:0031419 (25.5%) GO:0004494 (25.2%) GO:0046872 (24.3%)" lactate fermentation to propionate and acetate (24.6%) "cobalamin binding (25.5%) methylmalonyl-CoA mutase activity (25.2%) metal ion binding (24.3%)" "IPR006099 (25.5%) IPR016176 (25.5%) IPR004608 (24.6%)" "Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25.5%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25.5%) Methylmalonyl-CoA mutase, small subunit (24.6%)" SNQMTGLFSTIDEKTSQEK Pseudomonadati Bacteria Pseudomonadati GO:0061077 (1%) "GO:0042597 (95.9%) GO:0030288 (1%)" "GO:0042803 (1%) GO:0060241 (1%)" obsolete chaperone-mediated protein folding (1%) "periplasmic space (95.9%) outer membrane-bounded periplasmic space (1%)" "protein homodimerization activity (1%) lysozyme inhibitor activity (1%)" "IPR036501 (51%) IPR014453 (49%)" "Inhibitor of vertebrate lysozyme superfamily (51%) Inhibitor of vertebrate lysozyme (49%)" GQVTELGAVNVMTGVYTGR Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.4%) GO:0005829 (17.4%) "GO:0004612 (17.4%) GO:0005524 (17.4%) GO:0046872 (17%)" gluconeogenesis (17.4%) cytosol (17.4%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.4%) ATP binding (17.4%) metal ion binding (17%)" "IPR001272 (25.6%) IPR008210 (25.6%) IPR013035 (24.5%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.6%) Phosphoenolpyruvate carboxykinase, N-terminal (25.6%) Phosphoenolpyruvate carboxykinase, C-terminal (24.5%)" IVDDVLDQHRER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.4%) GO:0006402 (14.4%)" GO:0005829 (14.4%) "GO:0000175 (14.4%) GO:0003723 (14.4%) GO:0004654 (14.4%)" "RNA processing (14.4%) mRNA catabolic process (14.4%)" cytosol (14.4%) "3'-5'-RNA exonuclease activity (14.4%) RNA binding (14.4%) polyribonucleotide nucleotidyltransferase activity (14.4%)" "IPR001247 (7.8%) IPR012162 (7.8%) IPR015847 (7.8%)" "Exoribonuclease, phosphorolytic domain 1 (7.8%) Polyribonucleotide nucleotidyltransferase (7.8%) Exoribonuclease, phosphorolytic domain 2 (7.8%)" QMKDVLGANACPVVIPIGAEESFKGVVDLIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" YNQIIDTWTHVNSNLSNILIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" ELFANPDVDGGLIGGAALK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%) GO:0019563 (16.5%)" "GO:0005829 (16.5%) GO:0016020 (0.3%)" "GO:0004807 (16.5%) GO:0016853 (0.2%)" "gluconeogenesis (16.5%) glycolytic process (16.5%) glycerol catabolic process (16.5%)" "cytosol (16.5%) membrane (0.3%)" "triose-phosphate isomerase activity (16.5%) isomerase activity (0.2%)" "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" LAILDETDSGLDIDALR root "3.6.3.- (40%) 3.6.3.27 (40%) 2.8.1.7 (20%)" "Acting on acid anhydrides; catalyzing transmembrane movement of substances (40%) Transferred entry: 7.3.2.1 (40%) cysteine desulfurase (20%)" "GO:0006534 (0%) GO:0016226 (0%)" "GO:0005737 (3.1%) GO:0005886 (1.2%) GO:0009842 (0.1%)" "GO:0005524 (47.8%) GO:0016887 (47.5%) GO:0030170 (0%)" "cysteine metabolic process (0%) iron-sulfur cluster assembly (0%)" "cytoplasm (3.1%) plasma membrane (1.2%) cyanelle (0.1%)" "ATP binding (47.8%) ATP hydrolysis activity (47.5%) pyridoxal phosphate binding (0%)" "IPR010230 (24.3%) IPR027417 (24.3%) IPR003439 (24.1%)" "FeS cluster assembly SUF system, ATPase SufC (24.3%) P-loop containing nucleoside triphosphate hydrolase (24.3%) ABC transporter-like, ATP-binding domain (24.1%)" HCVINDLPLGR Pseudomonadati Bacteria Pseudomonadati "1.11.1.- (50%) 1.11.1.15 (50%)" "Peroxidases (50%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (50%)" "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" TEHELNANLLRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (12.3%) GO:0044210 (12.3%)" "GO:0005829 (12.3%) GO:0097268 (12.3%)" "GO:0003883 (12.3%) GO:0005524 (12.3%) GO:0042802 (12.3%)" "pyrimidine nucleobase biosynthetic process (12.3%) 'de novo' CTP biosynthetic process (12.3%)" "cytosol (12.3%) cytoophidium (12.3%)" "CTP synthase activity (12.3%) ATP binding (12.3%) identical protein binding (12.3%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" LSAFDQVITTADLLDEKYLLVQR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.9%) GO:0005829 (16.9%) "GO:0003723 (16.9%) GO:0004831 (16.9%) GO:0005524 (16.9%)" tyrosyl-tRNA aminoacylation (16.9%) cytosol (16.9%) "RNA binding (16.9%) tyrosine-tRNA ligase activity (16.9%) ATP binding (16.9%)" "IPR001412 (12.8%) IPR002305 (12.8%) IPR002307 (12.8%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.8%) Aminoacyl-tRNA synthetase, class Ic (12.8%) Tyrosine-tRNA ligase (12.8%)" RSENYSQWYNDLVVK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (19.9%) "GO:0005737 (19.9%) GO:0017101 (19.9%) GO:0016020 (0.2%)" "GO:0004827 (20.1%) GO:0005524 (19.9%)" prolyl-tRNA aminoacylation (19.9%) "cytoplasm (19.9%) aminoacyl-tRNA synthetase multienzyme complex (19.9%) membrane (0.2%)" "proline-tRNA ligase activity (20.1%) ATP binding (19.9%)" "IPR045864 (11.5%) IPR004499 (11.4%) IPR006195 (11.4%)" "Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.5%) Proline-tRNA ligase, class IIa, archaeal-type (11.4%) Aminoacyl-tRNA synthetase, class II (11.4%)" VSGLQPGADPAVDPGAQPR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium "IPR023296 (75%) IPR018337 (25%)" "Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (75%) Cell wall/choline-binding repeat (25%)" IGVAAENCADKEK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" AGISLDSNFAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.1.- (96%) 1.2.1.12 (4%)" "With NAD(+) or NADP(+) as acceptor (96%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (4%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (9.7%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (9.7%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" ALLKDSLDQIFATEYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.14 (100%) L-rhamnose isomerase (100%) "GO:0019301 (20%) GO:0019324 (20%)" GO:0005737 (20%) "GO:0008740 (20%) GO:0030145 (20%)" "rhamnose catabolic process (20%) L-lyxose metabolic process (20%)" cytoplasm (20%) "L-rhamnose isomerase activity (20%) manganese ion binding (20%)" "IPR009308 (33.3%) IPR036237 (33.3%) IPR050337 (33.3%)" "Rhamnose isomerase (33.3%) Xylose isomerase-like superfamily (33.3%) L-rhamnose isomerase (33.3%)" LLYVAPESLTKEENVDFLR Bacteroidota Bacteria Pseudomonadati Bacteroidota "5.6.2.4 (92.5%) 3.6.4.12 (7.5%)" "DNA 3'-5' helicase (92.5%) DNA helicase (7.5%)" "GO:0006260 (8.4%) GO:0006281 (8.4%) GO:0006310 (8.4%)" "GO:0005737 (8.4%) GO:0030894 (8.4%) GO:0043590 (8.4%)" "GO:0003677 (8.4%) GO:0005524 (8.4%) GO:0009378 (8.4%)" "DNA replication (8.4%) DNA repair (8.4%) DNA recombination (8.4%)" "cytoplasm (8.4%) replisome (8.4%) bacterial nucleoid (8.4%)" "DNA binding (8.4%) ATP binding (8.4%) four-way junction helicase activity (8.4%)" "IPR001650 (7.2%) IPR002121 (7.2%) IPR004589 (7.2%)" "Helicase, C-terminal domain-like (7.2%) HRDC domain (7.2%) DNA helicase, ATP-dependent, RecQ type (7.2%)" CSNGQTIIVTHDTNSPRPYSLGFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.2.1.49 (75%) 3.2.1.- (25%)" "alpha-N-acetylgalactosaminidase (75%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (25%)" "GO:0000166 (50%) GO:0016798 (41.7%) GO:0008456 (8.3%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (41.7%) alpha-N-acetylgalactosaminidase activity (8.3%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" TYHKESDELIAK root 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0019563 (16.6%)" "GO:0005829 (16.6%) GO:0016020 (0%)" "GO:0004807 (16.6%) GO:0016853 (0.2%) GO:0042802 (0%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) glycerol catabolic process (16.6%)" "cytosol (16.6%) membrane (0%)" "triose-phosphate isomerase activity (16.6%) isomerase activity (0.2%) identical protein binding (0%)" "IPR000652 (20.3%) IPR013785 (20.3%) IPR035990 (20.3%)" "Triosephosphate isomerase (20.3%) Aldolase-type TIM barrel (20.3%) Triosephosphate isomerase superfamily (20.3%)" DLNDFATVNATYEAFFTEHNATFPAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "3.5.4.- (83.6%) 3.5.99.10 (14.9%) 2.5.1.7 (1.5%)" "In cyclic amidines (83.6%) 2-iminobutanoate/2-iminopropanoate deaminase (14.9%) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (1.5%)" "GO:0009097 (0.4%) GO:0009636 (0.4%) GO:0070207 (0.1%)" "GO:0005829 (49%) GO:0016020 (0.1%) GO:0032991 (0.1%)" "GO:0019239 (48.5%) GO:0120242 (0.4%) GO:0120243 (0.4%)" "isoleucine biosynthetic process (0.4%) response to toxic substance (0.4%) protein homotrimerization (0.1%)" "cytosol (49%) membrane (0.1%) protein-containing complex (0.1%)" "deaminase activity (48.5%) 2-iminobutanoate deaminase activity (0.4%) 2-iminopropanoate deaminase activity (0.4%)" "IPR006175 (25.2%) IPR035959 (25.2%) IPR006056 (24.9%)" "YjgF/YER057c/UK114 family (25.2%) RutC-like superfamily (25.2%) RidA family (24.9%)" DAMKGGHEQDWIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (87.5%) GO:0050112 (12.5%)" "nucleotide binding (87.5%) inositol 2-dehydrogenase (NAD+) activity (12.5%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" SYIPALNTLIEMVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.1 (100%) alpha-amylase (100%) GO:0005975 (49%) "GO:0003824 (24.5%) GO:0016787 (20.4%) GO:0004556 (6.1%)" carbohydrate metabolic process (49%) "catalytic activity (24.5%) hydrolase activity (20.4%) alpha-amylase activity (6.1%)" "IPR004300 (33.3%) IPR011330 (33.3%) IPR052046 (33.3%)" "Glycoside hydrolase family 57, N-terminal domain (33.3%) Glycoside hydrolase/deacetylase, beta/alpha-barrel (33.3%) Glycosyl hydrolase family 57 (33.3%)" NKRPLLVACDVYRPAAIEQLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) GO:0048500 (20%) "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (20%)" SRP-dependent cotranslational protein targeting to membrane (20%) signal recognition particle (20%) "GTPase activity (20%) GTP binding (20%) 7S RNA binding (20%)" "IPR000897 (11.1%) IPR003593 (11.1%) IPR004125 (11.1%)" "Signal recognition particle, SRP54 subunit, GTPase domain (11.1%) AAA+ ATPase domain (11.1%) Signal recognition particle, SRP54 subunit, M-domain (11.1%)" VLYEMDGVPEELAR root "GO:0006412 (19.9%) GO:0002181 (0.1%) GO:0000027 (0%)" "GO:0022625 (19.9%) GO:0005840 (0.3%) GO:0005737 (0%)" "GO:0003735 (20%) GO:0019843 (20%) GO:0000049 (19.8%)" "translation (19.9%) cytoplasmic translation (0.1%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (19.9%) ribosome (0.3%) cytoplasm (0%)" "structural constituent of ribosome (20%) rRNA binding (20%) tRNA binding (19.8%)" "IPR000114 (19.9%) IPR036920 (19.9%) IPR047873 (19.9%)" "Large ribosomal subunit protein uL16, bacteria (19.9%) Large ribosomal subunit protein uL16 superfamily (19.9%) Large ribosomal subunit protein uL16 (19.9%)" DVAQEAYNLYKDNTDGKNADYIPYLANIDPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" EKIDEDWKPSSMFWEVTNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) "GO:0005978 (19.7%) GO:0005975 (0.5%)" "GO:0005737 (20.1%) GO:0016020 (0.1%)" "GO:0003844 (20.1%) GO:0004553 (19.8%) GO:0043169 (19.7%)" "glycogen biosynthetic process (19.7%) carbohydrate metabolic process (0.5%)" "cytoplasm (20.1%) membrane (0.1%)" "1,4-alpha-glucan branching enzyme activity (20.1%) hydrolase activity, hydrolyzing O-glycosyl compounds (19.8%) cation binding (19.7%)" "IPR017853 (12.7%) IPR004193 (12.5%) IPR006047 (12.5%)" "Glycoside hydrolase superfamily (12.7%) Glycoside hydrolase, family 13, N-terminal (12.5%) Glycosyl hydrolase family 13, catalytic domain (12.5%)" NIAIEHSGYSVFAGVGER root "7.1.2.2 (96.2%) 3.6.3.14 (3.7%) 3.6.1.15 (0.1%)" "H(+)-transporting two-sector ATPase (96.2%) Transferred entry: 7.1.2.2 (3.7%) nucleoside-triphosphate phosphatase (0.1%)" GO:0042777 (0%) "GO:0045259 (25.1%) GO:0005886 (19.6%) GO:0016020 (0%)" "GO:0005524 (25.1%) GO:0046933 (25.1%) GO:0016787 (4.1%)" proton motive force-driven plasma membrane ATP synthesis (0%) "proton-transporting ATP synthase complex (25.1%) plasma membrane (19.6%) membrane (0%)" "ATP binding (25.1%) proton-transporting ATP synthase activity, rotational mechanism (25.1%) hydrolase activity (4.1%)" "IPR000194 (12.2%) IPR050053 (12.2%) IPR027417 (12.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (12.2%) ATPase alpha/beta chains (12.2%) P-loop containing nucleoside triphosphate hydrolase (12.2%)" NWAAYTGDNYGQILSTDRNWTVGDR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.1.3.11 (100%) N-succinylornithine carbamoyltransferase (100%) "GO:0019240 (24.6%) GO:0042450 (24.6%) GO:0006526 (1.5%)" "GO:0004585 (24.6%) GO:0016597 (24.6%)" "citrulline biosynthetic process (24.6%) L-arginine biosynthetic process via ornithine (24.6%) L-arginine biosynthetic process (1.5%)" "ornithine carbamoyltransferase activity (24.6%) amino acid binding (24.6%)" "IPR006130 (20%) IPR006131 (20%) IPR006132 (20%)" "Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20%)" HGATTIFPTVLAPEIGVIDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (33.3%) "GO:0008448 (33.3%) GO:0046872 (33.3%)" N-acetylglucosamine catabolic process (33.3%) "N-acetylglucosamine-6-phosphate deacetylase activity (33.3%) metal ion binding (33.3%)" "IPR003764 (25%) IPR006680 (25%) IPR011059 (25%)" "N-acetylglucosamine-6-phosphate deacetylase (25%) Amidohydrolase-related (25%) Metal-dependent hydrolase, composite domain superfamily (25%)" AAAFEGELIPASQIDR root "GO:0006412 (24.6%) GO:0006417 (0.2%) GO:0002181 (0%)" "GO:0015934 (24.5%) GO:0005840 (1%) GO:1990904 (0.2%)" "GO:0003735 (24.6%) GO:0070180 (24.5%) GO:0019843 (0%)" "translation (24.6%) regulation of translation (0.2%) cytoplasmic translation (0%)" "large ribosomal subunit (24.5%) ribosome (1%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (24.6%) large ribosomal subunit rRNA binding (24.5%) rRNA binding (0%)" "IPR043141 (20.1%) IPR047865 (20.1%) IPR001790 (20.1%)" "Large ribosomal subunit protein uL10-like domain superfamily (20.1%) Large ribosomal subunit protein uL10, bacteria/organella (20.1%) Large ribosomal subunit protein uL10 (20.1%)" KLFDDAGLILVDFK root "6.3.2.6 (99.9%) 4.3.3.7 (0.1%)" "phosphoribosylaminoimidazolesuccinocarboxamide synthase (99.9%) 4-hydroxy-tetrahydrodipicolinate synthase (0.1%)" "GO:0006189 (20.1%) GO:0009236 (19.6%) GO:0006164 (0%)" "GO:0005829 (19.8%) GO:0016020 (0%) GO:0005737 (0%)" "GO:0004639 (20.1%) GO:0005524 (20.1%) GO:0016874 (0.1%)" "'de novo' IMP biosynthetic process (20.1%) cobalamin biosynthetic process (19.6%) purine nucleotide biosynthetic process (0%)" "cytosol (19.8%) membrane (0%) cytoplasm (0%)" "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (20.1%) ATP binding (20.1%) ligase activity (0.1%)" "IPR018236 (20.2%) IPR028923 (20.2%) IPR050089 (19.9%)" "SAICAR synthetase, conserved site (20.2%) SAICAR synthetase/ADE2, N-terminal (20.2%) SAICAR synthetase (19.9%)" GQTPHCIPAALAMHDTLAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.8.3.- (80%) 3.1.2.1 (20%)" "CoA-transferases (80%) acetyl-CoA hydrolase (20%)" "GO:0006083 (25.5%) GO:0006084 (23.4%)" "GO:0003986 (25.5%) GO:0008775 (25.5%)" "acetate metabolic process (25.5%) acetyl-CoA metabolic process (23.4%)" "acetyl-CoA hydrolase activity (25.5%) acetate CoA-transferase activity (25.5%)" "IPR026888 (17.1%) IPR037171 (17.1%) IPR038460 (17.1%)" "Acetyl-CoA hydrolase/transferase, C-terminal domain (17.1%) NagB/RpiA transferase-like (17.1%) Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily (17.1%)" VGFPILIRPSYVLSGAAMNVCHTK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (13.8%) GO:0006526 (13.8%) GO:0006541 (13.8%)" GO:0005737 (13.8%) "GO:0004088 (13.8%) GO:0005524 (13.8%) GO:0046872 (13.8%)" "pyrimidine nucleotide biosynthetic process (13.8%) L-arginine biosynthetic process (13.8%) glutamine metabolic process (13.8%)" cytoplasm (13.8%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.8%) ATP binding (13.8%) metal ion binding (13.8%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" KIFTPGDKADVLVAMNPAALK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.-.- (33.3%) 1.2.7.11 (33.3%) 1.2.7.3 (33.3%)" "Acting on the aldehyde or oxo group of donors (33.3%) 2-oxoacid oxidoreductase (ferredoxin) (33.3%) 2-oxoglutarate synthase (33.3%)" GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.6%) IPR002880 (12.6%) IPR009014 (12.6%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.6%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.6%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.6%)" SMLAEECELNPFLIEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (33.3%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (33.3%)" "IPR003741 (12.8%) IPR004452 (12.8%) IPR009051 (12.8%)" "LUD domain (12.8%) L-lactate oxidation iron-sulfur protein LutB/LldF (12.8%) Alpha-helical ferredoxin (12.8%)" TLAAASSLGMEAMPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR004389 (34.1%) IPR005484 (34.1%) IPR057268 (31.7%)" "Large ribosomal subunit protein uL18, bacteria (34.1%) Large ribosomal subunit protein uL18, bacterial/plantae/animalia (34.1%) Large ribosomal subunit protein uL18 (31.7%)" YSLSQIVDAVSEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%)" GO:0005829 (16.5%) "GO:0004618 (16.5%) GO:0005524 (16.5%) GO:0043531 (16.5%)" "gluconeogenesis (16.5%) glycolytic process (16.5%)" cytosol (16.5%) "phosphoglycerate kinase activity (16.5%) ATP binding (16.5%) ADP binding (16.5%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" EFKVECNQGKPQVNYKEAITK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.3%) GO:0005737 (19.3%) "GO:0003746 (20.4%) GO:0005525 (20.3%) GO:0003924 (19.7%)" ribosome disassembly (20.3%) cytoplasm (19.3%) "translation elongation factor activity (20.4%) GTP binding (20.3%) GTPase activity (19.7%)" "IPR000640 (6.3%) IPR005517 (6.3%) IPR035649 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translation elongation factor EFG/EF2, domain IV (6.3%) EFG, domain V (6.3%)" LDNCADDVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.1%) GO:0005737 (19.7%) "GO:0004816 (20.1%) GO:0005524 (20.1%) GO:0003676 (19.9%)" asparaginyl-tRNA aminoacylation (20.1%) cytoplasm (19.7%) "asparagine-tRNA ligase activity (20.1%) ATP binding (20.1%) nucleic acid binding (19.9%)" "IPR002312 (14.3%) IPR004364 (14.3%) IPR004522 (14.3%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.3%) Aminoacyl-tRNA synthetase, class II (D/K/N) (14.3%) Asparagine-tRNA ligase (14.3%)" RVEGGQHLNVNVLR root 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006950 (0.1%) "GO:0005829 (47.9%) GO:0005737 (0.1%)" "GO:0008861 (47.9%) GO:0016829 (3.5%) GO:0003824 (0.4%)" response to stress (0.1%) "cytosol (47.9%) cytoplasm (0.1%)" "formate C-acetyltransferase activity (47.9%) lyase activity (3.5%) catalytic activity (0.4%)" "IPR001150 (25.2%) IPR050244 (25.1%) IPR019777 (25%)" "Glycine radical domain (25.2%) Autonomous Glycyl Radical Cofactor (25.1%) Formate C-acetyltransferase glycine radical, conserved site (25%)" VIAYPTEAVFGVGCDPDSETAVMR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 2.7.7.87 (100%) L-threonylcarbamoyladenylate synthase (100%) "GO:0006450 (14.3%) GO:0002949 (13.3%) GO:0008033 (0.3%)" "GO:0005737 (14.3%) GO:0005694 (0.2%) GO:0005829 (0.1%)" "GO:0003725 (14.3%) GO:0000049 (14.3%) GO:0005524 (13.3%)" "regulation of translational fidelity (14.3%) tRNA threonylcarbamoyladenosine modification (13.3%) tRNA processing (0.3%)" "cytoplasm (14.3%) chromosome (0.2%) cytosol (0.1%)" "double-stranded RNA binding (14.3%) tRNA binding (14.3%) ATP binding (13.3%)" "IPR006070 (25.4%) IPR017945 (25.4%) IPR050156 (25.3%)" "Threonylcarbamoyl-AMP synthase-like domain (25.4%) DHBP synthase RibB-like alpha/beta domain superfamily (25.4%) Threonylcarbamoyl-AMP synthase, SUA5 (25.3%)" LIAELNDFLAANASEFALIKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" LGNAVDPFSTIEK Pseudomonadati Bacteria Pseudomonadati 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.3%) GO:0005737 (13.9%) "GO:0004822 (14.4%) GO:0005524 (14.4%) GO:0000049 (14.3%)" isoleucyl-tRNA aminoacylation (14.3%) cytoplasm (13.9%) "isoleucine-tRNA ligase activity (14.4%) ATP binding (14.4%) tRNA binding (14.3%)" "IPR014729 (12.6%) IPR023586 (12.6%) IPR002300 (12.5%)" "Rossmann-like alpha/beta/alpha sandwich fold (12.6%) Isoleucine-tRNA ligase, type 2 (12.6%) Aminoacyl-tRNA synthetase, class Ia (12.5%)" YIGSRPCLIDFHAPWCGYCK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR013766 (33.3%) IPR017937 (33.3%) IPR036249 (33.3%)" "Thioredoxin domain (33.3%) Thioredoxin, conserved site (33.3%) Thioredoxin-like superfamily (33.3%)" MKHTVEVMIPEAEIK root 2.4.2.8 (100%) hypoxanthine phosphoribosyltransferase (100%) "GO:0006178 (10%) GO:0032263 (10%) GO:0032264 (10%)" "GO:0005829 (10%) GO:0032991 (0%)" "GO:0000287 (10%) GO:0004422 (10%) GO:0052657 (10%)" "guanine salvage (10%) GMP salvage (10%) IMP salvage (10%)" "cytosol (10%) protein-containing complex (0%)" "magnesium ion binding (10%) hypoxanthine phosphoribosyltransferase activity (10%) guanine phosphoribosyltransferase activity (10%)" "IPR029057 (25.2%) IPR000836 (25.1%) IPR050408 (25.1%)" "Phosphoribosyltransferase-like (25.2%) Phosphoribosyltransferase domain (25.1%) Hypoxanthine-guanine phosphoribosyltransferase (25.1%)" ANLQPVLITGMEK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 1.8.1.9 (100%) thioredoxin-disulfide reductase (NADPH) (100%) "GO:0019430 (19.7%) GO:0045454 (0.1%)" "GO:0005829 (19.8%) GO:0032991 (19.8%) GO:0005737 (0%)" "GO:0004791 (20.3%) GO:0050660 (19.8%) GO:0016491 (0.4%)" "removal of superoxide radicals (19.7%) cell redox homeostasis (0.1%)" "cytosol (19.8%) protein-containing complex (19.8%) cytoplasm (0%)" "thioredoxin-disulfide reductase (NADPH) activity (20.3%) flavin adenine dinucleotide binding (19.8%) oxidoreductase activity (0.4%)" "IPR036188 (20.3%) IPR050097 (20.3%) IPR023753 (20.3%)" "FAD/NAD(P)-binding domain superfamily (20.3%) Ferredoxin--NADP reductase type 2 (20.3%) FAD/NAD(P)-binding domain (20.3%)" FLEYYSNAPEIEIPSTNDRR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.6.4.13 (100%) RNA helicase (100%) "GO:0009266 (12.1%) GO:0042255 (12.1%)" GO:0005829 (15.2%) "GO:0003676 (15.2%) GO:0003724 (15.2%) GO:0005524 (15.2%)" "response to temperature stimulus (12.1%) ribosome assembly (12.1%)" cytosol (15.2%) "nucleic acid binding (15.2%) RNA helicase activity (15.2%) ATP binding (15.2%)" "IPR000629 (11.4%) IPR001650 (11.4%) IPR005580 (11.4%)" "ATP-dependent RNA helicase DEAD-box, conserved site (11.4%) Helicase, C-terminal domain-like (11.4%) DEAD box helicase DbpA/CsdA, RNA-binding domain (11.4%)" MECEMEKPYILIYDKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (19.4%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (11.8%) GO:1990220 (0.1%)" "GO:0005524 (19.4%) GO:0140662 (19.4%) GO:0016853 (17.6%)" "protein refolding (19.4%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (11.8%) GroEL-GroES complex (0.1%)" "ATP binding (19.4%) ATP-dependent protein folding chaperone (19.4%) isomerase activity (17.6%)" "IPR001844 (17.7%) IPR002423 (17.7%) IPR027409 (17.7%)" "Chaperonin Cpn60/GroEL (17.7%) Chaperonin Cpn60/GroEL/TCP-1 family (17.7%) GroEL-like apical domain superfamily (17.7%)" IGIIENLMDKVDNLILCGGMTYTFAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33%) IPR015824 (33%) IPR036043 (33%)" "Phosphoglycerate kinase (33%) Phosphoglycerate kinase, N-terminal (33%) Phosphoglycerate kinase superfamily (33%)" LEFPDAILKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.4%) GO:0051083 (16.4%)" "GO:0003755 (16.4%) GO:0043022 (16.4%) GO:0044183 (16.4%)" "protein transport (16.7%) protein unfolding (16.4%) 'de novo' cotranslational protein folding (16.4%)" "peptidyl-prolyl cis-trans isomerase activity (16.4%) ribosome binding (16.4%) protein folding chaperone (16.4%)" "IPR027304 (20.1%) IPR037041 (20.1%) IPR008881 (20%)" "Trigger factor/SurA domain superfamily (20.1%) Trigger factor, C-terminal domain superfamily (20.1%) Trigger factor, ribosome-binding, bacterial (20%)" KSYGGSHIVMSCK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.4.1.3 (52.9%) 6.-.-.- (47.1%)" "propionyl-CoA carboxylase (52.9%) Ligases (47.1%)" "GO:0015977 (22.2%) GO:0006633 (0.1%)" GO:0009317 (22.2%) "GO:0004658 (24.5%) GO:0003989 (22.2%) GO:0016740 (8.2%)" "carbon fixation (22.2%) fatty acid biosynthetic process (0.1%)" acetyl-CoA carboxylase complex (22.2%) "propionyl-CoA carboxylase activity (24.5%) acetyl-CoA carboxylase activity (22.2%) transferase activity (8.2%)" "IPR011763 (20%) IPR029045 (20%) IPR034733 (20%)" "Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20%)" FKDVAEECGVSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0043200 (27.6%) GO:0006355 (9.2%)" GO:0005829 (27.6%) GO:0043565 (35.6%) "response to amino acid (27.6%) regulation of DNA-templated transcription (9.2%)" cytosol (27.6%) sequence-specific DNA binding (35.6%) "IPR000485 (15.4%) IPR011008 (15.4%) IPR019887 (15.4%)" "AsnC-type HTH domain (15.4%) Dimeric alpha-beta barrel (15.4%) Transcription regulator AsnC/Lrp, ligand binding domain (15.4%)" HQNIGFEAIDLANGLFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.7%) IPR006101 (7.7%) IPR006102 (7.7%)" "Beta galactosidase small chain/ domain 5 (7.7%) Glycoside hydrolase, family 2 (7.7%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.7%)" EQFELSSFKR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0000049 (16.7%) GO:0003723 (3.3%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) tRNA binding (16.7%) RNA binding (3.3%)" "IPR001848 (25.3%) IPR027486 (25.3%) IPR036838 (25.3%)" "Small ribosomal subunit protein uS10 (25.3%) Small ribosomal subunit protein uS10 domain (25.3%) Small ribosomal subunit protein uS10 domain superfamily (25.3%)" AVEAFVDTVSNELKEGGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" IIHCNGKDVFDSMNAMTEAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0009083 (33.5%) GO:0007584 (33%)" "GO:0016624 (30%) GO:0003863 (3.4%)" "branched-chain amino acid catabolic process (33.5%) response to nutrient (33%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (30%) branched-chain 2-oxo acid dehydrogenase activity (3.4%)" "IPR001017 (20.1%) IPR029061 (20.1%) IPR005475 (19.8%)" "Dehydrogenase, E1 component (20.1%) Thiamin diphosphate-binding fold (20.1%) Transketolase-like, pyrimidine-binding domain (19.8%)" LYAAGECSCTGLHGGNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.4.3.16 (100%) L-aspartate oxidase (100%) GO:0034628 (34.5%) GO:0005737 (31%) GO:0008734 (34.5%) 'de novo' NAD+ biosynthetic process from L-aspartate (34.5%) cytoplasm (31%) L-aspartate oxidase activity (34.5%) "IPR003953 (16.9%) IPR005288 (16.9%) IPR027477 (16.9%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (16.9%) L-aspartate oxidase (16.9%) Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily (16.9%)" YFSPEEVNIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0046034 (33.3%) GO:1902600 (33.3%)" GO:0005524 (33.3%) "ATP metabolic process (33.3%) proton transmembrane transport (33.3%)" ATP binding (33.3%) "IPR000194 (20%) IPR004100 (20%) IPR022879 (20%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (20%) V-type ATP synthase regulatory subunit B/beta (20%)" SAFNFIHACTPVMMK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) GO:0006633 (33.3%) "GO:0004316 (33.3%) GO:0051287 (33.3%)" fatty acid biosynthetic process (33.3%) "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33.3%) NAD binding (33.3%)" "IPR002347 (16.7%) IPR011284 (16.7%) IPR020904 (16.7%)" "Short-chain dehydrogenase/reductase SDR (16.7%) 3-oxoacyl-(acyl-carrier-protein) reductase (16.7%) Short-chain dehydrogenase/reductase, conserved site (16.7%)" VGVTTSVSVDHATPAAFYAHQPDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50.4%) GO:0046872 (49.6%)" "alkaline phosphatase activity (50.4%) metal ion binding (49.6%)" "IPR001952 (33.3%) IPR017850 (33.3%) IPR018299 (33.3%)" "Alkaline phosphatase (33.3%) Alkaline-phosphatase-like, core domain superfamily (33.3%) Alkaline phosphatase, active site (33.3%)" GVNPDEVVAVGAAVQGAVLTDEIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0042026 (0.2%) GO:0051085 (0.2%)" "GO:0005524 (33.3%) GO:0140662 (33.3%) GO:0051082 (32.1%)" "protein refolding (0.2%) obsolete chaperone cofactor-dependent protein refolding (0.2%)" "ATP binding (33.3%) ATP-dependent protein folding chaperone (33.3%) unfolded protein binding (32.1%)" "IPR013126 (16.8%) IPR029047 (16.8%) IPR029048 (16.8%)" "Heat shock protein 70 family (16.8%) Heat shock protein 70kD, peptide-binding domain superfamily (16.8%) Heat shock protein 70kD, C-terminal domain superfamily (16.8%)" AMDEQGKSLDDFLIKQ Bacteria Bacteria "GO:0006355 (0.1%) GO:0006417 (0.1%) GO:0036386 (0.1%)" "GO:0005829 (10.7%) GO:0032993 (10.7%) GO:0009295 (10.6%)" "GO:0000976 (10.7%) GO:0001217 (10.7%) GO:0003680 (10.7%)" "regulation of DNA-templated transcription (0.1%) regulation of translation (0.1%) bacterial nucleoid DNA packaging (0.1%)" "cytosol (10.7%) protein-DNA complex (10.7%) nucleoid (10.6%)" "transcription cis-regulatory region binding (10.7%) DNA-binding transcription repressor activity (10.7%) minor groove of adenine-thymine-rich DNA binding (10.7%)" "IPR027444 (20.4%) IPR037150 (20.4%) IPR001801 (19.7%)" "DNA-binding protein H-NS-like, C-terminal domain (20.4%) Histone-like protein H-NS, C-terminal domain superfamily (20.4%) DNA-binding protein H-NS-like (19.7%)" RLLAEHNLDASAIK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "2.3.1.61 (97.1%) 2.3.1.- (2.9%)" "dihydrolipoyllysine-residue succinyltransferase (97.1%) Transferring groups other than amino-acyl groups (2.9%)" "GO:0006099 (19.6%) GO:0033512 (18.7%) GO:0006086 (0.1%)" "GO:0005829 (19.6%) GO:0045252 (18.8%) GO:0005737 (0.7%)" "GO:0004149 (20.2%) GO:0031405 (0.7%) GO:0016407 (0.6%)" "tricarboxylic acid cycle (19.6%) L-lysine catabolic process to acetyl-CoA via saccharopine (18.7%) pyruvate decarboxylation to acetyl-CoA (0.1%)" "cytosol (19.6%) oxoglutarate dehydrogenase complex (18.8%) cytoplasm (0.7%)" "dihydrolipoyllysine-residue succinyltransferase activity (20.2%) lipoic acid binding (0.7%) acetyltransferase activity (0.6%)" "IPR004167 (11.4%) IPR036625 (11.4%) IPR000089 (11.2%)" "Peripheral subunit-binding domain (11.4%) E3-binding domain superfamily (11.4%) Biotin/lipoyl attachment (11.2%)" IDFRPFIKVESVSAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.75 (100%) uroporphyrinogen-III synthase (100%) GO:0006780 (33.3%) GO:0005829 (33.3%) GO:0004852 (33.3%) uroporphyrinogen III biosynthetic process (33.3%) cytosol (33.3%) uroporphyrinogen-III synthase activity (33.3%) "IPR003754 (33.3%) IPR036108 (33.3%) IPR039793 (33.3%)" "Tetrapyrrole biosynthesis, uroporphyrinogen III synthase (33.3%) Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily (33.3%) Uroporphyrinogen-III synthase (33.3%)" STFQQLPGTGVKPDQFHSQTR root 1.2.4.2 (100%) oxoglutarate dehydrogenase (succinyl-transferring) (100%) GO:0006099 (19.7%) "GO:0005829 (19.7%) GO:0045252 (19.7%) GO:0005737 (0.2%)" "GO:0004591 (19.7%) GO:0030976 (19.7%) GO:0016491 (0.5%)" tricarboxylic acid cycle (19.7%) "cytosol (19.7%) oxoglutarate dehydrogenase complex (19.7%) cytoplasm (0.2%)" "oxoglutarate dehydrogenase (succinyl-transferring) activity (19.7%) thiamine pyrophosphate binding (19.7%) oxidoreductase activity (0.5%)" "IPR011603 (15.7%) IPR032106 (15.7%) IPR029061 (15.5%)" "2-oxoglutarate dehydrogenase E1 component (15.7%) 2-oxoglutarate dehydrogenase E1 component, N-terminal domain (15.7%) Thiamin diphosphate-binding fold (15.5%)" NQLRDEVDRTVTHMQDEAANFPDPVDR root "GO:0010468 (32.8%) GO:0006355 (0.1%) GO:0006302 (0.1%)" "GO:0005737 (33.2%) GO:0005829 (0.1%)" "GO:0008270 (33.2%) GO:0003677 (0.6%) GO:0097216 (0.1%)" "regulation of gene expression (32.8%) regulation of DNA-templated transcription (0.1%) double-strand break repair (0.1%)" "cytoplasm (33.2%) cytosol (0.1%)" "zinc ion binding (33.2%) DNA binding (0.6%) guanosine tetraphosphate binding (0.1%)" "IPR037187 (17%) IPR048489 (17%) IPR012784 (16.9%)" "DksA, N-terminal domain superfamily (17%) DnaK suppressor protein DksA, N-terminal domain (17%) RNA polymerase-binding transcription factor DksA (16.9%)" LISLFHTKPNETFSLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.1.13.1 (100%) exoribonuclease II (100%) GO:0006402 (24.8%) GO:0005829 (24.8%) "GO:0003723 (24.8%) GO:0008859 (24.8%) GO:0004527 (1%)" mRNA catabolic process (24.8%) cytosol (24.8%) "RNA binding (24.8%) exoribonuclease II activity (24.8%) exonuclease activity (1%)" "IPR012340 (11.4%) IPR013223 (11.4%) IPR040476 (11.4%)" "Nucleic acid-binding, OB-fold (11.4%) Ribonuclease B, N-terminal OB domain (11.4%) RNase II/RNase R, cold shock domain (11.4%)" RGDINSPVLVGGAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20.1%) "GO:0005840 (20.1%) GO:1990904 (20.1%)" "GO:0003735 (20.1%) GO:0019843 (18.4%) GO:0003723 (1.4%)" translation (20.1%) "ribosome (20.1%) ribonucleoprotein complex (20.1%)" "structural constituent of ribosome (20.1%) rRNA binding (18.4%) RNA binding (1.4%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" NGELVDKQVGAVGKPAFVEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" GTVVTGRVER root "3.6.5.3 (99.1%) 2.7.1.25 (0.9%)" "protein-synthesizing GTPase (99.1%) adenylyl-sulfate kinase (0.9%)" "GO:0070125 (0.8%) GO:0006414 (0%) GO:0030908 (0%)" "GO:0005829 (15.4%) GO:0032045 (8.6%) GO:0005737 (0.9%)" "GO:0003746 (17.4%) GO:0005525 (17.3%) GO:0003924 (15.9%)" "mitochondrial translational elongation (0.8%) translational elongation (0%) protein splicing (0%)" "cytosol (15.4%) guanyl-nucleotide exchange factor complex (8.6%) cytoplasm (0.9%)" "translation elongation factor activity (17.4%) GTP binding (17.3%) GTPase activity (15.9%)" "IPR050055 (9.4%) IPR009000 (9.3%) IPR004161 (9.2%)" "Elongation factor Tu GTPase (9.4%) Translation protein, beta-barrel domain superfamily (9.3%) Translation elongation factor EFTu-like, domain 2 (9.2%)" LMAAELYKPFIIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) GO:0000428 (17%) "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (15.5%)" DNA-templated transcription (17%) DNA-directed RNA polymerase complex (17%) "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (15.5%)" "IPR000722 (9.2%) IPR006592 (9.2%) IPR007080 (9.2%)" "RNA polymerase, alpha subunit (9.2%) RNA polymerase, N-terminal (9.2%) RNA polymerase Rpb1, domain 1 (9.2%)" IVAGNAEEFVHELR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola QGKDSAAIYQGQGR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0016884 (93.8%) GO:0016740 (6.3%)" "carbon-nitrogen ligase activity, with glutamine as amido-N-donor (93.8%) transferase activity (6.3%)" "IPR003789 (25%) IPR019004 (25%) IPR023168 (25%)" "Aspartyl/glutamyl-tRNA amidotransferase subunit B-like (25%) Uncharacterised protein YqeY/Aim41 (25%) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 (25%)" IYQASTSELYGK root 4.2.1.47 (100%) GDP-mannose 4,6-dehydratase (100%) GO:0042351 (34.8%) "GO:0008446 (34.8%) GO:0070401 (30.3%) GO:0016829 (0.1%)" 'de novo' GDP-L-fucose biosynthetic process (34.8%) "GDP-mannose 4,6-dehydratase activity (34.8%) NADP+ binding (30.3%) lyase activity (0.1%)" "IPR006368 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "GDP-mannose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" TWYVAGFIEDQQFSNER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" TAAEELFKEVGDRIEFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" KYYDFLSAYSAVNQGHCHPR root 2.6.1.13 (100%) ornithine aminotransferase (100%) "GO:0010121 (14.9%) GO:0019544 (14.9%) GO:0055129 (10.4%)" "GO:0005737 (11.7%) GO:0005759 (3.2%)" "GO:0004587 (14.9%) GO:0030170 (14.9%) GO:0042802 (14.9%)" "L-arginine catabolic process to proline via ornithine (14.9%) L-arginine catabolic process to L-glutamate (14.9%) L-proline biosynthetic process (10.4%)" "cytoplasm (11.7%) mitochondrial matrix (3.2%)" "ornithine aminotransferase activity (14.9%) pyridoxal phosphate binding (14.9%) identical protein binding (14.9%)" "IPR005814 (14.8%) IPR010164 (14.8%) IPR015421 (14.8%)" "Aminotransferase class-III (14.8%) Ornithine aminotransferase (14.8%) Pyridoxal phosphate-dependent transferase, major domain (14.8%)" AAGGKIPHLAAILVGHDGGSETYVASK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.5.1.5 (50%) 3.5.4.9 (50%)" "methylenetetrahydrofolate dehydrogenase (NADP(+)) (50%) methenyltetrahydrofolate cyclohydrolase (50%)" "GO:0000105 (14.3%) GO:0006164 (14.3%) GO:0009086 (14.3%)" GO:0005829 (14.3%) "GO:0004477 (14.3%) GO:0004488 (14.3%)" "L-histidine biosynthetic process (14.3%) purine nucleotide biosynthetic process (14.3%) methionine biosynthetic process (14.3%)" cytosol (14.3%) "methenyltetrahydrofolate cyclohydrolase activity (14.3%) methylenetetrahydrofolate dehydrogenase (NADP+) activity (14.3%)" "IPR000672 (16.7%) IPR020630 (16.7%) IPR020631 (16.7%)" "Tetrahydrofolate dehydrogenase/cyclohydrolase (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (16.7%)" IAEAAWQVNESTENIGAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "3.4.25.2 (60%) 3.4.21.- (20%) 3.6.1.15 (10%)" "HslU--HslV peptidase (60%) Serine endopeptidases (20%) nucleoside-triphosphate phosphatase (10%)" "GO:0051603 (14.4%) GO:0043335 (13.4%) GO:0006508 (0.2%)" "GO:0009376 (14.4%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0005524 (14.5%) GO:0008233 (14.4%) GO:0016887 (14.4%)" "proteolysis involved in protein catabolic process (14.4%) protein unfolding (13.4%) proteolysis (0.2%)" "HslUV protease complex (14.4%) cytosol (0.1%) membrane (0.1%)" "ATP binding (14.5%) peptidase activity (14.4%) ATP hydrolysis activity (14.4%)" "IPR019489 (17%) IPR027417 (17%) IPR050052 (17%)" "Clp ATPase, C-terminal (17%) P-loop containing nucleoside triphosphate hydrolase (17%) ATP-dependent Clp protease ATP-binding subunit ClpX (17%)" GIIDAILDGSINEAPTKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.2%) GO:0005829 (18.2%) "GO:0004612 (18.2%) GO:0005524 (18.2%) GO:0046872 (18.2%)" gluconeogenesis (18.2%) cytosol (18.2%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.2%) ATP binding (18.2%) metal ion binding (18.2%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" TFLDQYVIGQDDAKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0051301 (10%) GO:0051603 (10%)" GO:0009376 (10%) "GO:0005524 (10%) GO:0008233 (10%) GO:0008270 (10%)" "cell division (10%) proteolysis involved in protein catabolic process (10%)" HslUV protease complex (10%) "ATP binding (10%) peptidase activity (10%) zinc ion binding (10%)" "IPR003593 (11.1%) IPR003959 (11.1%) IPR004487 (11.1%)" "AAA+ ATPase domain (11.1%) ATPase, AAA-type, core (11.1%) Clp protease, ATP-binding subunit ClpX (11.1%)" FKDLADHFEK IVTEIFDEVAEAHLIQPTFITEYPAEVSPLAR root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.5%) GO:0006418 (0%) GO:0034605 (0%)" "GO:0005829 (14.5%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0000049 (14.5%) GO:0004824 (14.5%) GO:0005524 (14.5%)" "lysyl-tRNA aminoacylation (14.5%) tRNA aminoacylation for protein translation (0%) cellular response to heat (0%)" "cytosol (14.5%) cytoplasm (0.1%) membrane (0%)" "tRNA binding (14.5%) lysine-tRNA ligase activity (14.5%) ATP binding (14.5%)" "IPR004364 (11.5%) IPR045864 (11.5%) IPR006195 (11.4%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (11.5%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.5%) Aminoacyl-tRNA synthetase, class II (11.4%)" KLLDQAQAGDNIGALLR Bacteria Bacteria 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0006414 (0.1%) "GO:0005829 (20.6%) GO:0005737 (0.3%)" "GO:0003746 (21.1%) GO:0005525 (20.9%) GO:0003924 (20.5%)" translational elongation (0.1%) "cytosol (20.6%) cytoplasm (0.3%)" "translation elongation factor activity (21.1%) GTP binding (20.9%) GTPase activity (20.5%)" "IPR009000 (8.6%) IPR050055 (8.6%) IPR004160 (8.5%)" "Translation protein, beta-barrel domain superfamily (8.6%) Elongation factor Tu GTPase (8.6%) Translation elongation factor EFTu/EF1A, C-terminal (8.5%)" QGIHPDYHAVQVTCSCGNTFVTR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0006412 (16.7%) "GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16.7%) GO:0046872 (16.7%)" translation (16.7%) "ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%) metal ion binding (16.7%)" "IPR002150 (25%) IPR027491 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL31 type A/B (25%) Large ribosomal subunit protein bL31 type A (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" VHVHVEEGSPKDR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0007155 (9.1%) GO:1902021 (9.1%)" "GO:0005524 (63.6%) GO:0008859 (9.1%) GO:0016787 (9.1%)" "cell adhesion (9.1%) regulation of bacterial-type flagellum-dependent cell motility (9.1%)" "ATP binding (63.6%) exoribonuclease II activity (9.1%) hydrolase activity (9.1%)" "IPR006016 (33.5%) IPR014729 (33.5%) IPR006015 (33.1%)" "UspA (33.5%) Rossmann-like alpha/beta/alpha sandwich fold (33.5%) Universal stress protein A family (33.1%)" SNLEDGVAFAIEK root "3.1.3.23 (94.5%) 3.1.3.- (5.5%)" "sugar-phosphatase (94.5%) Phosphoric monoester hydrolases (5.5%)" GO:0016311 (0.4%) GO:0005829 (32.5%) "GO:0000287 (32.5%) GO:0016791 (23.8%) GO:0050308 (9.4%)" dephosphorylation (0.4%) cytosol (32.5%) "magnesium ion binding (32.5%) phosphatase activity (23.8%) sugar-phosphatase activity (9.4%)" "IPR023214 (26%) IPR036412 (26%) IPR006379 (24.6%)" "HAD superfamily (26%) HAD-like superfamily (26%) HAD-superfamily hydrolase, subfamily IIB (24.6%)" SGLNAENYENFIQTDAAINR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "3.4.21.107 (99.2%) 3.4.21.- (0.8%)" "peptidase Do (99.2%) Serine endopeptidases (0.8%)" "GO:0051603 (24.1%) GO:0006508 (2.1%) GO:0006515 (1.4%)" "GO:0030313 (23.7%) GO:0042597 (9.8%) GO:0005886 (0.3%)" "GO:0004252 (27.1%) GO:0042802 (9.3%) GO:0016787 (0.5%)" "proteolysis involved in protein catabolic process (24.1%) proteolysis (2.1%) protein quality control for misfolded or incompletely synthesized proteins (1.4%)" "cell envelope (23.7%) periplasmic space (9.8%) plasma membrane (0.3%)" "serine-type endopeptidase activity (27.1%) identical protein binding (9.3%) hydrolase activity (0.5%)" "IPR001940 (20.4%) IPR009003 (20.4%) IPR001478 (19.8%)" "Peptidase S1C (20.4%) Peptidase S1, PA clan (20.4%) PDZ domain (19.8%)" NNLPFTLIADTDKK Pseudomonadati Bacteria Pseudomonadati "1.11.1.24 (98.6%) 1.11.1.15 (1.4%)" "thioredoxin-dependent peroxiredoxin (98.6%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (1.4%)" "GO:0034599 (24.9%) GO:0045454 (24.9%)" GO:0005737 (24.9%) "GO:0008379 (24.9%) GO:0004601 (0.4%)" "cellular response to oxidative stress (24.9%) cell redox homeostasis (24.9%)" cytoplasm (24.9%) "thioredoxin peroxidase activity (24.9%) peroxidase activity (0.4%)" "IPR000866 (20.1%) IPR036249 (20.1%) IPR050924 (20.1%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (20.1%) Thioredoxin-like superfamily (20.1%) Thiol-specific peroxidase BCP/PrxQ (20.1%)" YRYANADMADLER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.29 (99.2%) 2.3.1.50 (0.8%)" "glycine C-acetyltransferase (99.2%) serine C-palmitoyltransferase (0.8%)" "GO:0030148 (14%) GO:0019518 (13.9%) GO:0006567 (0.5%)" "GO:0005829 (14.4%) GO:0016020 (14%)" "GO:0008890 (14.4%) GO:0030170 (14.4%) GO:0004758 (7.4%)" "sphingolipid biosynthetic process (14%) L-threonine catabolic process to glycine (13.9%) L-threonine catabolic process (0.5%)" "cytosol (14.4%) membrane (14%)" "glycine C-acetyltransferase activity (14.4%) pyridoxal phosphate binding (14.4%) serine C-palmitoyltransferase activity (7.4%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" LQTLGLTQGTVVTISAEGEDEKQAVEHLVK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales GO:0009401 (43.5%) GO:0005737 (43.5%) GO:0016740 (13%) phosphoenolpyruvate-dependent sugar phosphotransferase system (43.5%) cytoplasm (43.5%) transferase activity (13%) "IPR000032 (20%) IPR001020 (20%) IPR002114 (20%)" "Phosphocarrier protein HPr-like (20%) Phosphotransferase system, HPr histidine phosphorylation site (20%) Phosphotransferase system, HPr serine phosphorylation site (20%)" NADYIPYLANIDPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" IGLFDMILLKDNHVDFAGGIDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.2.19 (100%) nicotinate-nucleotide diphosphorylase (carboxylating) (100%) "GO:0009435 (24.9%) GO:0034213 (24.9%) GO:0051301 (0.2%)" GO:0005737 (24.9%) "GO:0004514 (24.9%) GO:0016757 (0.4%)" "NAD+ biosynthetic process (24.9%) quinolinate catabolic process (24.9%) cell division (0.2%)" cytoplasm (24.9%) "nicotinate-nucleotide diphosphorylase (carboxylating) activity (24.9%) glycosyltransferase activity (0.4%)" "IPR002638 (14.3%) IPR004393 (14.3%) IPR013785 (14.3%)" "Quinolinate phosphoribosyl transferase, C-terminal (14.3%) Nicotinate-nucleotide pyrophosphorylase (14.3%) Aldolase-type TIM barrel (14.3%)" NLGGDPEHPFAILPEVAELYAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" LLVCDHSIDDVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20.1%) IPR037284 (20.1%) IPR045595 (20.1%)" "SUF system FeS cluster assembly, SufBD core domain (20.1%) SUF system FeS cluster assembly, SufBD superfamily (20.1%) SUF system FeS cluster assembly, SufBD, N-terminal (20.1%)" AVENVNKVIAPHLIGMSALDQIGIDHAMLALDGTK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" IPNVPHPDVPQGTTDEDNVEIR Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 6.1.1.11 (100%) serine--tRNA ligase (100%) "GO:0006434 (14.3%) GO:0016260 (14.3%)" GO:0005737 (14.3%) "GO:0004828 (14.3%) GO:0005524 (14.3%) GO:0016740 (14.3%)" "seryl-tRNA aminoacylation (14.3%) selenocysteine biosynthetic process (14.3%)" cytoplasm (14.3%) "serine-tRNA ligase activity (14.3%) ATP binding (14.3%) transferase activity (14.3%)" "IPR002314 (12.5%) IPR002317 (12.5%) IPR006195 (12.5%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (12.5%) Serine-tRNA ligase, type1 (12.5%) Aminoacyl-tRNA synthetase, class II (12.5%)" SKPHVNIGTIGHVDHGK root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0070125 (3.6%) GO:0006414 (0%) GO:0032543 (0%)" "GO:0005829 (14.2%) GO:0005739 (3.7%) GO:0032045 (3.5%)" "GO:0003746 (18.9%) GO:0003924 (18.8%) GO:0005525 (18.8%)" "mitochondrial translational elongation (3.6%) translational elongation (0%) mitochondrial translation (0%)" "cytosol (14.2%) mitochondrion (3.7%) guanyl-nucleotide exchange factor complex (3.5%)" "translation elongation factor activity (18.9%) GTPase activity (18.8%) GTP binding (18.8%)" "IPR000795 (8.6%) IPR027417 (8.6%) IPR050055 (8.5%)" "Translational (tr)-type GTP-binding domain (8.6%) P-loop containing nucleoside triphosphate hydrolase (8.6%) Elongation factor Tu GTPase (8.5%)" RVVINKDTTTIIDGVGEEAAIQGR root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (16.9%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (16.6%) GO:1990220 (0.1%) GO:0005829 (0%)" "GO:0140662 (16.9%) GO:0005524 (16.8%) GO:0016853 (16.8%)" "protein refolding (16.9%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (16.6%) GroEL-GroES complex (0.1%) cytosol (0%)" "ATP-dependent protein folding chaperone (16.9%) ATP binding (16.8%) isomerase activity (16.8%)" "IPR001844 (16.8%) IPR027409 (16.8%) IPR002423 (16.7%)" "Chaperonin Cpn60/GroEL (16.8%) GroEL-like apical domain superfamily (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%)" VQLTPEIDVDAILAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "5.4.2.10 (72.7%) 5.4.2.2 (18.2%) 5.4.2.8 (9.1%)" "phosphoglucosamine mutase (72.7%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (18.2%) phosphomannomutase (9.1%)" "GO:0005975 (14%) GO:0006048 (14%) GO:0009252 (14%)" GO:0005829 (14%) "GO:0000287 (14%) GO:0004615 (14%) GO:0008966 (14%)" "carbohydrate metabolic process (14%) UDP-N-acetylglucosamine biosynthetic process (14%) peptidoglycan biosynthetic process (14%)" cytosol (14%) "magnesium ion binding (14%) phosphomannomutase activity (14%) phosphoglucosamine mutase activity (14%)" "IPR005841 (10.1%) IPR005844 (10.1%) IPR005845 (10.1%)" "Alpha-D-phosphohexomutase superfamily (10.1%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10.1%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (10.1%)" SRIDSFTGIGDEK root 2.5.1.55 (100%) 3-deoxy-8-phosphooctulonate synthase (100%) "GO:0009103 (29.1%) GO:0046364 (0.1%)" "GO:0005737 (35.3%) GO:0005829 (0.1%)" GO:0008676 (35.4%) "lipopolysaccharide biosynthetic process (29.1%) monosaccharide biosynthetic process (0.1%)" "cytoplasm (35.3%) cytosol (0.1%)" 3-deoxy-8-phosphooctulonate synthase activity (35.4%) "IPR006218 (33.4%) IPR006269 (33.4%) IPR013785 (33.2%)" "DAHP synthetase I/KDSA (33.4%) 3-deoxy-8-phosphooctulonate synthase (33.4%) Aldolase-type TIM barrel (33.2%)" AANPTPEKPFVLGCPTGSSPLGMYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (13.4%) GO:0005737 (0.7%)" "GO:0004342 (14.3%) GO:0042802 (14.3%) GO:0016853 (0.2%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (13.4%) cytoplasm (0.7%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%) isomerase activity (0.2%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" IKLQPANPFTWASGWK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25.3%) GO:0044205 (25.1%) GO:0006222 (0.4%)" GO:0016020 (0.2%) "GO:0004588 (25.3%) GO:0000287 (23.4%) GO:0016757 (0.2%)" "pyrimidine nucleobase biosynthetic process (25.3%) 'de novo' UMP biosynthetic process (25.1%) UMP biosynthetic process (0.4%)" membrane (0.2%) "orotate phosphoribosyltransferase activity (25.3%) magnesium ion binding (23.4%) glycosyltransferase activity (0.2%)" "IPR000836 (25.1%) IPR029057 (25.1%) IPR004467 (24.9%)" "Phosphoribosyltransferase domain (25.1%) Phosphoribosyltransferase-like (25.1%) Orotate phosphoribosyl transferase domain (24.9%)" VVGCTNDYEKTADSDVVVITSGIPR Bacteroides zoogleoformans Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides zoogleoformans AVAFGECLQPEYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.4%) GO:0035999 (15.4%) GO:0032259 (11.4%)" GO:0005829 (15.4%) "GO:0004372 (15.4%) GO:0030170 (15.4%) GO:0008168 (11.4%)" "glycine biosynthetic process from serine (15.4%) tetrahydrofolate interconversion (15.4%) methylation (11.4%)" cytosol (15.4%) "glycine hydroxymethyltransferase activity (15.4%) pyridoxal phosphate binding (15.4%) methyltransferase activity (11.4%)" "IPR001085 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Serine hydroxymethyltransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" DFIADQVLKR Bacteria Bacteria 1.1.1.22 (100%) UDP-glucose 6-dehydrogenase (100%) "GO:0000271 (26.1%) GO:0006065 (21.7%)" "GO:0003979 (26.1%) GO:0051287 (26.1%)" "polysaccharide biosynthetic process (26.1%) UDP-glucuronate biosynthetic process (21.7%)" "UDP-glucose 6-dehydrogenase activity (26.1%) NAD binding (26.1%)" "IPR001732 (11.1%) IPR008927 (11.1%) IPR013328 (11.1%)" "UDP-glucose/GDP-mannose dehydrogenase, N-terminal (11.1%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (11.1%) 6-phosphogluconate dehydrogenase, domain 2 (11.1%)" FVQMYGDVVLGMKPVNKEDQDPFEAIIEEVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" GISGQTTSEMLVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0004622 (100%) phosphatidylcholine lysophospholipase activity (100%) "IPR013830 (33.3%) IPR036514 (33.3%) IPR051532 (33.3%)" "SGNH hydrolase-type esterase domain (33.3%) SGNH hydrolase superfamily (33.3%) Diverse Ester Hydrolysis Enzymes (33.3%)" TMIEMVPWMPVQYNGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR012910 (13%) IPR023996 (13%) IPR023997 (13%)" "TonB-dependent receptor, plug domain (13%) TonB-dependent outer membrane protein, SusC/RagA (13%) TonB-dependent outer membrane protein SusC/RagA, conserved site (13%)" HIGPDMDVPAGDIGVGGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.4.1.4 (78.9%) 1.4.1.2 (21.1%)" "glutamate dehydrogenase (NADP(+)) (78.9%) glutamate dehydrogenase (21.1%)" GO:0006537 (25.8%) GO:0005829 (25.8%) "GO:0004354 (25.8%) GO:0000166 (21.7%) GO:0004352 (0.6%)" glutamate biosynthetic process (25.8%) cytosol (25.8%) "glutamate dehydrogenase (NADP+) activity (25.8%) nucleotide binding (21.7%) glutamate dehydrogenase (NAD+) activity (0.6%)" "IPR006097 (11.3%) IPR046346 (11.3%) IPR050724 (11.3%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.3%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.3%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.3%)" QADGVVIVTPEYNYSVPGGLK root "1.6.5.2 (94.4%) 1.-.-.- (3.3%) 1.6.-.- (1.4%)" "NAD(P)H dehydrogenase (quinone) (94.4%) Oxidoreductases (3.3%) Acting on NADH or NADPH (1.4%)" "GO:0006805 (0.2%) GO:0051289 (0.2%)" GO:0005829 (31.7%) "GO:0010181 (31.7%) GO:0016491 (26.6%) GO:0050446 (4.5%)" "xenobiotic metabolic process (0.2%) protein homotetramerization (0.2%)" cytosol (31.7%) "FMN binding (31.7%) oxidoreductase activity (26.6%) azobenzene reductase (NADP+) activity (4.5%)" "IPR005025 (33.3%) IPR029039 (33.3%) IPR050712 (33.3%)" "NADPH-dependent FMN reductase-like domain (33.3%) Flavoprotein-like superfamily (33.3%) NAD(P)H-dependent reductase (33.3%)" GMPLYEHIAELNGTPGK root "4.2.1.11 (99.8%) 6.3.4.2 (0.2%)" "phosphopyruvate hydratase (99.8%) CTP synthase (glutamine hydrolyzing) (0.2%)" "GO:0006096 (16.7%) GO:0006396 (0%) GO:0006401 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.6%) GO:0009986 (16.1%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.1%)" "glycolytic process (16.7%) RNA processing (0%) RNA catabolic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.6%) cell surface (16.1%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.1%)" "IPR000941 (16.7%) IPR020811 (16.7%) IPR029017 (16.7%)" "Enolase (16.7%) Enolase, N-terminal (16.7%) Enolase-like, N-terminal (16.7%)" SSSCTVYGEPDELPVTENAPIKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR005886 (33.3%) IPR036291 (33.3%) IPR001509 (31%)" "UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD-dependent epimerase/dehydratase (31%)" SYEAVVDGLAMLIGSHCEIVLHSLQDLK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria GO:0005829 (4.9%) GO:0003677 (95.1%) cytosol (4.9%) DNA binding (95.1%) "IPR013559 (33.8%) IPR039446 (33.8%) IPR039445 (32.4%)" "YheO-like (33.8%) Transcriptional regulator DauR-like (33.8%) Transcriptional regulator DauR-like, HTH domain (32.4%)" AHASTALIAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.2%) IPR015824 (33.2%) IPR036043 (33.2%)" "Phosphoglycerate kinase (33.2%) Phosphoglycerate kinase, N-terminal (33.2%) Phosphoglycerate kinase superfamily (33.2%)" SFASTGQEVSNEIIYSVVEEVENFVGKDTANR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) GO:0009263 (25%) GO:0005971 (25%) "GO:0004748 (25%) GO:0005524 (25%)" deoxyribonucleotide biosynthetic process (25%) ribonucleoside-diphosphate reductase complex (25%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (25%) ATP binding (25%)" "IPR000788 (16.7%) IPR005144 (16.7%) IPR008926 (16.7%)" "Ribonucleotide reductase large subunit, C-terminal (16.7%) ATP-cone domain (16.7%) Ribonucleotide reductase R1 subunit, N-terminal (16.7%)" LEMGNQLGLR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.12 (100%) aspartate--tRNA ligase (100%) "GO:0006422 (19.8%) GO:0006418 (0.2%)" GO:0005737 (20%) "GO:0004815 (20%) GO:0005524 (20%) GO:0003676 (19.6%)" "aspartyl-tRNA aminoacylation (19.8%) tRNA aminoacylation for protein translation (0.2%)" cytoplasm (20%) "aspartate-tRNA ligase activity (20%) ATP binding (20%) nucleic acid binding (19.6%)" "IPR004115 (9.2%) IPR004364 (9.2%) IPR029351 (9.2%)" "GAD-like domain superfamily (9.2%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.2%) GAD domain (9.2%)" MQAAGAQAYLVNTGWNGTGKR Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.4%) GO:0005829 (17.4%) "GO:0004612 (17.4%) GO:0005524 (17.4%) GO:0046872 (16.3%)" gluconeogenesis (17.4%) cytosol (17.4%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.4%) ATP binding (17.4%) metal ion binding (16.3%)" "IPR001272 (25.6%) IPR013035 (25.6%) IPR015994 (24.6%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.6%) Phosphoenolpyruvate carboxykinase, C-terminal (25.6%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (24.6%)" AGINPSHVDSEAHMESNMDKGWITAEDVAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" NELIADVIALLESPAK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (6.7%) "GO:0005840 (43.3%) GO:1990904 (43.3%)" GO:0070180 (6.7%) translation (6.7%) "ribosome (43.3%) ribonucleoprotein complex (43.3%)" large ribosomal subunit rRNA binding (6.7%) "IPR001790 (31.7%) IPR043141 (31.7%) IPR047865 (31.7%)" "Large ribosomal subunit protein uL10 (31.7%) Large ribosomal subunit protein uL10-like domain superfamily (31.7%) Large ribosomal subunit protein uL10, bacteria/organella (31.7%)" ALLDIIGTDALTK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (34%) "GO:0016615 (31.9%) GO:0016616 (31.9%) GO:0030060 (2.1%)" malate metabolic process (34%) "malate dehydrogenase activity (31.9%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (31.9%) L-malate dehydrogenase (NAD+) activity (2.1%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" NVFENPVWYTSYTPYQAEVSQGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR015421 (14.5%) IPR015422 (14.5%) IPR015424 (14.5%)" "Pyridoxal phosphate-dependent transferase, major domain (14.5%) Pyridoxal phosphate-dependent transferase, small domain (14.5%) Pyridoxal phosphate-dependent transferase (14.5%)" LVAIDIAPVDYHVR root "3.1.-.- (98.3%) 3.1.1.116 (1.7%)" "Acting on ester bonds (98.3%) sn-1-specific diacylglycerol lipase (1.7%)" "GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0016787 (99.3%) GO:0016746 (0.1%) GO:0016790 (0.1%)" "cytosol (0.1%) membrane (0.1%)" "hydrolase activity (99.3%) acyltransferase activity (0.1%) thiolester hydrolase activity (0.1%)" "IPR000073 (50%) IPR029058 (50%)" "Alpha/beta hydrolase fold-1 (50%) Alpha/Beta hydrolase fold (50%)" AYEAIVKGEPMPTPGIPESLNVLLHELR Bacteria Bacteria 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (8%) IPR007641 (8%) IPR015712 (8%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (8%) RNA polymerase Rpb2, domain 7 (8%) DNA-directed RNA polymerase, subunit 2 (8%)" FHLDGIPAAQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005737 (23.6%) GO:0070013 (3.3%)" "GO:0005524 (24.4%) GO:0051082 (24.4%) GO:0140662 (24.4%)" "cytoplasm (23.6%) intracellular organelle lumen (3.3%)" "ATP binding (24.4%) unfolded protein binding (24.4%) ATP-dependent protein folding chaperone (24.4%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" TESFAQLFEESLKEIETRPGSIVR root "GO:0006412 (24.7%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.7%) GO:0005840 (0.6%) GO:0005737 (0%)" "GO:0003729 (24.7%) GO:0003735 (24.7%) GO:0003676 (0.1%)" "translation (24.7%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.7%) ribosome (0.6%) cytoplasm (0%)" "mRNA binding (24.7%) structural constituent of ribosome (24.7%) nucleic acid binding (0.1%)" "IPR012340 (20.2%) IPR035104 (20.2%) IPR003029 (20.2%)" "Nucleic acid-binding, OB-fold (20.2%) Ribosomal protein S1-like (20.2%) S1 domain (20.2%)" QVGVPYIVVFLNK root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0%) GO:0032790 (0%) GO:0070125 (0%)" "GO:0005829 (16.1%) GO:0032045 (9%) GO:0005737 (0.6%)" "GO:0003746 (17%) GO:0003924 (16.8%) GO:0005525 (16.8%)" "translational elongation (0%) ribosome disassembly (0%) mitochondrial translational elongation (0%)" "cytosol (16.1%) guanyl-nucleotide exchange factor complex (9%) cytoplasm (0.6%)" "translation elongation factor activity (17%) GTPase activity (16.8%) GTP binding (16.8%)" "IPR000795 (8.7%) IPR050055 (8.7%) IPR027417 (8.7%)" "Translational (tr)-type GTP-binding domain (8.7%) Elongation factor Tu GTPase (8.7%) P-loop containing nucleoside triphosphate hydrolase (8.7%)" GLAYWEIEVTGPNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.4.13.- (66.7%) 3.5.1.18 (26.9%) 3.5.1.- (5.1%)" "Dipeptidases (66.7%) succinyl-diaminopimelate desuccinylase (26.9%) In linear amides (5.1%)" "GO:0046872 (49.5%) GO:0016787 (36.8%) GO:0016805 (9.2%)" "metal ion binding (49.5%) hydrolase activity (36.8%) dipeptidase activity (9.2%)" "IPR002933 (33.3%) IPR011650 (33.3%) IPR051458 (33.3%)" "Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%) Cytosolic and Metallo Dipeptidase (33.3%)" IKVIDESIKEE Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR007139 (100%) Protein of unknown function DUF349 (100%) EAPAQIQELIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.3.16 (100%) L-aspartate oxidase (100%) GO:0034628 (33.3%) GO:0005737 (33.3%) GO:0008734 (33.3%) 'de novo' NAD+ biosynthetic process from L-aspartate (33.3%) cytoplasm (33.3%) L-aspartate oxidase activity (33.3%) "IPR003953 (16.7%) IPR005288 (16.7%) IPR015939 (16.7%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (16.7%) L-aspartate oxidase (16.7%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (16.7%)" MKDNLAATLSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (25%) GO:0006183 (25%)" "GO:0003938 (25%) GO:0046872 (25%)" "GMP biosynthetic process (25%) GTP biosynthetic process (25%)" "IMP dehydrogenase activity (25%) metal ion binding (25%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" GDFAHEVFAEVVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "4.1.2.14 (51.9%) 4.1.3.16 (48.1%)" "2-dehydro-3-deoxy-phosphogluconate aldolase (51.9%) 4-hydroxy-2-oxoglutarate aldolase (48.1%)" "GO:0016829 (42.9%) GO:0008675 (29.6%) GO:0008700 (27.6%)" "lyase activity (42.9%) 2-dehydro-3-deoxy-phosphogluconate aldolase activity (29.6%) (R,S)-4-hydroxy-2-oxoglutarate aldolase activity (27.6%)" "IPR000887 (50%) IPR013785 (50%)" "KDPG/KHG aldolase (50%) Aldolase-type TIM barrel (50%)" VQMLAQAAEEHPLHGGTGIAHTR root 2.6.1.16 (100%) glutamine--fructose-6-phosphate transaminase (isomerizing) (100%) "GO:0006002 (12.7%) GO:0006487 (12.7%) GO:0006047 (12.7%)" GO:0005829 (12.7%) "GO:0004360 (12.7%) GO:0097367 (12.3%) GO:0008483 (0.2%)" "fructose 6-phosphate metabolic process (12.7%) protein N-linked glycosylation (12.7%) UDP-N-acetylglucosamine metabolic process (12.7%)" cytosol (12.7%) "glutamine-fructose-6-phosphate transaminase (isomerizing) activity (12.7%) carbohydrate derivative binding (12.3%) transaminase activity (0.2%)" "IPR017932 (12.8%) IPR029055 (12.8%) IPR047084 (12.6%)" "Glutamine amidotransferase type 2 domain (12.8%) Nucleophile aminohydrolases, N-terminal (12.8%) Glucosamine-fructose-6-phosphate aminotransferase, isomerising, N-terminal domain (12.6%)" LAATITPQHLMFNR root "3.5.2.3 (99.9%) 3.-.-.- (0.1%)" "dihydroorotase (99.9%) Hydrolases (0.1%)" "GO:0006207 (19.9%) GO:0044205 (19.9%) GO:0006221 (0.1%)" "GO:0005829 (19.9%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0004151 (19.9%) GO:0008270 (19.2%) GO:0046872 (0.6%)" "'de novo' pyrimidine nucleobase biosynthetic process (19.9%) 'de novo' UMP biosynthetic process (19.9%) pyrimidine nucleotide biosynthetic process (0.1%)" "cytosol (19.9%) cytoplasm (0%) plasma membrane (0%)" "dihydroorotase activity (19.9%) zinc ion binding (19.2%) metal ion binding (0.6%)" "IPR004721 (25.2%) IPR032466 (25.1%) IPR002195 (25%)" "Dihydroorotase homodimeric type (25.2%) Metal-dependent hydrolase (25.1%) Dihydroorotase, conserved site (25%)" AAIGIPEEWLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "4.1.2.13 (80%) 4.1.2.- (20%)" "fructose-bisphosphate aldolase (80%) Aldehyde-lyases (20%)" "GO:0006096 (22.3%) GO:0030388 (22.3%) GO:0005975 (3.3%)" GO:0016020 (0.8%) "GO:0008270 (25.6%) GO:0004332 (22.3%) GO:0016832 (3.3%)" "glycolytic process (22.3%) fructose 1,6-bisphosphate metabolic process (22.3%) carbohydrate metabolic process (3.3%)" membrane (0.8%) "zinc ion binding (25.6%) fructose-bisphosphate aldolase activity (22.3%) aldehyde-lyase activity (3.3%)" "IPR000771 (25.8%) IPR013785 (25.8%) IPR050246 (25.8%)" "Fructose-bisphosphate aldolase, class-II (25.8%) Aldolase-type TIM barrel (25.8%) Class II Fructose-bisphosphate Aldolase (25.8%)" MDNAIFRFPKPINEPVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (25%) GO:0009898 (25%) "GO:0003842 (25%) GO:0004657 (25%)" L-proline catabolic process to L-glutamate (25%) cytoplasmic side of plasma membrane (25%) "L-glutamate gamma-semialdehyde dehydrogenase activity (25%) proline dehydrogenase activity (25%)" "IPR005931 (14.3%) IPR015590 (14.3%) IPR016160 (14.3%)" "Delta-1-pyrroline-5-carboxylate dehydrogenase (14.3%) Aldehyde dehydrogenase domain (14.3%) Aldehyde dehydrogenase, cysteine active site (14.3%)" VLGDLSLNHIIPVAVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (50%) GO:0004356 (50%) glutamine biosynthetic process (50%) glutamine synthetase activity (50%) "IPR008146 (14.3%) IPR008147 (14.3%) IPR014746 (14.3%)" "Glutamine synthetase, catalytic domain (14.3%) Glutamine synthetase, N-terminal domain (14.3%) Glutamine synthetase/guanido kinase, catalytic domain (14.3%)" YDLVNKVNAIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (16.8%) "GO:0005840 (16.8%) GO:1990904 (16.8%) GO:0005737 (15.9%)" "GO:0003735 (16.8%) GO:0019843 (16.8%)" translation (16.8%) "ribosome (16.8%) ribonucleoprotein complex (16.8%) cytoplasm (15.9%)" "structural constituent of ribosome (16.8%) rRNA binding (16.8%)" "IPR000630 (33.3%) IPR035987 (33.3%) IPR047863 (33.3%)" "Small ribosomal subunit protein uS8 (33.3%) Small ribosomal subunit protein uS8 superfamily (33.3%) Small ribosomal subunit protein uS8, conserved site (33.3%)" HIAPGVNTLQLDKIAEEFIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.11.18 (100%) methionyl aminopeptidase (100%) GO:0006508 (20%) GO:0005829 (20%) "GO:0004239 (20%) GO:0046914 (20%) GO:0070006 (20%)" proteolysis (20%) cytosol (20%) "initiator methionyl aminopeptidase activity (20%) transition metal ion binding (20%) metalloaminopeptidase activity (20%)" "IPR000994 (25%) IPR001714 (25%) IPR002467 (25%)" "Peptidase M24 (25%) Peptidase M24, methionine aminopeptidase (25%) Peptidase M24A, methionine aminopeptidase, subfamily 1 (25%)" SIGATTHVGVTASSDTFYPGQERYDTYSGR root 2.4.2.3 (100%) uridine phosphorylase (100%) "GO:0009164 (20%) GO:0009166 (20%) GO:0044206 (18.2%)" "GO:0005829 (20.4%) GO:0032991 (0%)" "GO:0004850 (20.3%) GO:0016757 (0.2%) GO:0003824 (0.1%)" "nucleoside catabolic process (20%) nucleotide catabolic process (20%) UMP salvage (18.2%)" "cytosol (20.4%) protein-containing complex (0%)" "uridine phosphorylase activity (20.3%) glycosyltransferase activity (0.2%) catalytic activity (0.1%)" "IPR000845 (25.2%) IPR035994 (25.2%) IPR010058 (24.8%)" "Nucleoside phosphorylase domain (25.2%) Nucleoside phosphorylase superfamily (25.2%) Uridine phosphorylase (24.8%)" AYAGICYYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016020 (100%) membrane (100%) "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" FQQAGNIEKAEENYKHATDVTSK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" TVNDLLRPEHQ Pseudomonadati Bacteria Pseudomonadati GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" VGVNDFIEAGFISSSQLVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (25%) "GO:0022625 (23.4%) GO:0005840 (1.6%) GO:1990904 (1.6%)" "GO:0003735 (25%) GO:0019843 (23.4%)" translation (25%) "cytosolic large ribosomal subunit (23.4%) ribosome (1.6%) ribonucleoprotein complex (1.6%)" "structural constituent of ribosome (25%) rRNA binding (23.4%)" "IPR001196 (20.5%) IPR021131 (20.5%) IPR036227 (20.5%)" "Large ribosomal subunit protein uL15, conserved site (20.5%) Large ribosomal subunit protein uL15/eL18 (20.5%) Large ribosomal subunit protein uL15/eL18 superfamily (20.5%)" MVLCKPGQIKPHSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (20.1%) GO:0032045 (0.3%)" "GO:0003746 (20.3%) GO:0003924 (20.1%) GO:0005525 (20.1%)" "cytosol (20.1%) guanyl-nucleotide exchange factor complex (0.3%)" "translation elongation factor activity (20.3%) GTPase activity (20.1%) GTP binding (20.1%)" "IPR000795 (8.4%) IPR004161 (8.4%) IPR004541 (8.4%)" "Translational (tr)-type GTP-binding domain (8.4%) Translation elongation factor EFTu-like, domain 2 (8.4%) Translation elongation factor EFTu/EF1A, bacterial/organelle (8.4%)" IIEEMTPFITGEFTVSDIKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR027848 (100%) Protein of unknown function DUF4494 (100%) QGYTAIVDYAHTPDALVNVLNAIHGVLEGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.2.13 (100%) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (100%) "GO:0008360 (12.5%) GO:0009252 (12.5%) GO:0051301 (12.5%)" GO:0005737 (12.5%) "GO:0000287 (12.5%) GO:0005524 (12.5%) GO:0008765 (12.5%)" "regulation of cell shape (12.5%) peptidoglycan biosynthetic process (12.5%) cell division (12.5%)" cytoplasm (12.5%) "magnesium ion binding (12.5%) ATP binding (12.5%) UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity (12.5%)" "IPR000713 (14.3%) IPR004101 (14.3%) IPR005761 (14.3%)" "Mur ligase, N-terminal catalytic domain (14.3%) Mur ligase, C-terminal (14.3%) UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (14.3%)" GTLYEVIYQLTGGLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" GTPAHSAVSYQDGDYLMFGPETR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "2.1.1.207 (96.7%) 2.1.1.- (3.3%)" "tRNA (cytidine(34)-2'-O)-methyltransferase (96.7%) Methyltransferases (3.3%)" "GO:0002131 (14.3%) GO:0002132 (14.3%) GO:0032259 (0.1%)" GO:0005737 (14.2%) "GO:0003723 (14.3%) GO:0042802 (14.1%) GO:0008175 (11.2%)" "wobble position cytosine ribose methylation (14.3%) wobble position uridine ribose methylation (14.3%) methylation (0.1%)" cytoplasm (14.2%) "RNA binding (14.3%) identical protein binding (14.1%) tRNA methyltransferase activity (11.2%)" "IPR001537 (25%) IPR016914 (25%) IPR029026 (25%)" "tRNA/rRNA methyltransferase, SpoU type (25%) tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL (25%) tRNA (guanine-N1-)-methyltransferase, N-terminal (25%)" ENAVFDLYELEETHTSTVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR011542 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufD (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" QIYSYEEAFEESLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (23.8%) GO:0009263 (3.6%)" "GO:0004748 (23.8%) GO:0031419 (23.8%) GO:0000166 (20.2%)" "DNA biosynthetic process (23.8%) deoxyribonucleotide biosynthetic process (3.6%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (23.8%) cobalamin binding (23.8%) nucleotide binding (20.2%)" "IPR000788 (31.8%) IPR013344 (31.8%) IPR050862 (31.8%)" "Ribonucleotide reductase large subunit, C-terminal (31.8%) Ribonucleotide reductase, adenosylcobalamin-dependent (31.8%) Ribonucleoside diphosphate reductase class-2 (31.8%)" SLGIPVEDYITDKVVNVDIFER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" NQAEVDKALAAITECVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (19.7%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (19.7%)" "IPR006098 (16.8%) IPR006099 (16.8%) IPR016176 (16.8%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.8%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.8%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (16.8%)" MNTTLAEGLALAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" LKIPLFFAYDVLHGQR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "3.2.1.21 (99.8%) 3.2.1.- (0.2%)" "beta-glucosidase (99.8%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (0.2%)" "GO:0009251 (33.2%) GO:0005975 (1.1%)" "GO:0042597 (30.1%) GO:0016020 (0.1%) GO:0030288 (0.1%)" "GO:0008422 (34.2%) GO:0016798 (1%) GO:0004553 (0.1%)" "glucan catabolic process (33.2%) carbohydrate metabolic process (1.1%)" "periplasmic space (30.1%) membrane (0.1%) outer membrane-bounded periplasmic space (0.1%)" "beta-glucosidase activity (34.2%) hydrolase activity, acting on glycosyl bonds (1%) hydrolase activity, hydrolyzing O-glycosyl compounds (0.1%)" "IPR036962 (11.7%) IPR001764 (11.7%) IPR017853 (11.7%)" "Glycoside hydrolase, family 3, N-terminal domain superfamily (11.7%) Glycoside hydrolase, family 3, N-terminal (11.7%) Glycoside hydrolase superfamily (11.7%)" NFDELRQVLSIGGVDR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.4.2.19 (100%) nicotinate-nucleotide diphosphorylase (carboxylating) (100%) "GO:0009435 (25%) GO:0034213 (25%)" GO:0005737 (25%) GO:0004514 (25%) "NAD+ biosynthetic process (25%) quinolinate catabolic process (25%)" cytoplasm (25%) nicotinate-nucleotide diphosphorylase (carboxylating) activity (25%) "IPR002638 (14.3%) IPR004393 (14.3%) IPR013785 (14.3%)" "Quinolinate phosphoribosyl transferase, C-terminal (14.3%) Nicotinate-nucleotide pyrophosphorylase (14.3%) Aldolase-type TIM barrel (14.3%)" IATDTPEKFLSDLIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola LLLVLPEANKNVYLSAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.2%) "GO:0005840 (20.2%) GO:1990904 (20.2%)" "GO:0003735 (20.2%) GO:0019843 (16.7%) GO:0003723 (2.4%)" translation (20.2%) "ribosome (20.2%) ribonucleoprotein complex (20.2%)" "structural constituent of ribosome (20.2%) rRNA binding (16.7%) RNA binding (2.4%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" AQVIDGGGEILPTEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (16.7%) GO:0005886 (16.7%) "GO:0009055 (16.7%) GO:0016655 (16.7%) GO:0046872 (16.7%)" sodium ion transport (16.7%) plasma membrane (16.7%) "electron transfer activity (16.7%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (16.7%) metal ion binding (16.7%)" "IPR001041 (10%) IPR001433 (10%) IPR001709 (10%)" "2Fe-2S ferredoxin-type iron-sulfur binding domain (10%) Oxidoreductase FAD/NAD(P)-binding (10%) Flavoprotein pyridine nucleotide cytochrome reductase (10%)" KLVVDPLYLGCLIIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0016407 (50%) GO:0008959 (41.7%) GO:0016746 (8.3%)" "acetyltransferase activity (50%) phosphate acetyltransferase activity (41.7%) acyltransferase activity (8.3%)" "IPR002505 (17%) IPR042113 (17%) IPR050500 (17%)" "Phosphate acetyl/butaryl transferase (17%) Phosphate acetyltransferase, domain 1 (17%) Phosphate Acetyltransferase/Butyryltransferase (17%)" SIGVGQYQHDVEQNALKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006139 (19%) GO:0006412 (19%)" "GO:0005737 (19%) GO:0005840 (4.8%)" "GO:0003729 (19%) GO:0003735 (19%)" "nucleobase-containing compound metabolic process (19%) translation (19%)" "cytoplasm (19%) ribosome (4.8%)" "mRNA binding (19%) structural constituent of ribosome (19%)" "IPR003029 (7.1%) IPR006641 (7.1%) IPR010994 (7.1%)" "S1 domain (7.1%) YqgF/RNase H-like domain (7.1%) RuvA domain 2-like (7.1%)" ISYASQNAPNEIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006811 (24.3%) "GO:0009279 (27.2%) GO:0046930 (24.3%)" GO:0015288 (24.3%) monoatomic ion transport (24.3%) "cell outer membrane (27.2%) pore complex (24.3%)" porin activity (24.3%) "IPR006664 (17%) IPR006665 (17%) IPR006690 (17%)" "Outer membrane protein, bacterial (17%) OmpA-like domain (17%) Outer membrane protein, OmpA-like, conserved site (17%)" GIIINGGPNNVIDGVAIDVNPGIYEMGTPVMAAGHDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (16.7%) IPR014729 (16.7%) IPR017926 (16.7%)" "GMP synthase, C-terminal (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Glutamine amidotransferase (16.7%)" AGTVQAAVNESNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25.2%) "GO:0004494 (25.2%) GO:0031419 (25.2%) GO:0046872 (23.9%)" lactate fermentation to propionate and acetate (25.2%) "methylmalonyl-CoA mutase activity (25.2%) cobalamin binding (25.2%) metal ion binding (23.9%)" "IPR004608 (25.3%) IPR006099 (25.3%) IPR016176 (25.3%)" "Methylmalonyl-CoA mutase, small subunit (25.3%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25.3%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25.3%)" SVRFPGLISYVTPPGGGTTDYAVDIYYSAVKGEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.103 (50%) 4.2.1.47 (50%)" "L-threonine 3-dehydrogenase (50%) GDP-mannose 4,6-dehydratase (50%)" GO:0006567 (49.2%) "GO:0008743 (49.2%) GO:0016829 (1.6%)" L-threonine catabolic process (49.2%) "L-threonine 3-dehydrogenase activity (49.2%) lyase activity (1.6%)" "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" SQFFYIHPDNPQQR Bacteria Bacteria "2.7.7.87 (90.9%) 3.1.3.97 (9.1%)" "L-threonylcarbamoyladenylate synthase (90.9%) 3',5'-nucleoside bisphosphate phosphatase (9.1%)" GO:0006364 (0.2%) GO:0005829 (0.4%) "GO:0003725 (95.8%) GO:0016779 (2.3%) GO:0061710 (0.4%)" rRNA processing (0.2%) cytosol (0.4%) "double-stranded RNA binding (95.8%) nucleotidyltransferase activity (2.3%) L-threonylcarbamoyladenylate synthase (0.4%)" "IPR017945 (33.4%) IPR006070 (33.2%) IPR052532 (33.2%)" "DHBP synthase RibB-like alpha/beta domain superfamily (33.4%) Threonylcarbamoyl-AMP synthase-like domain (33.2%) SUA5 domain-containing protein (33.2%)" ALLDKGVTIEQVNGIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0033178 (50%) GO:0046961 (50%) proton-transporting two-sector ATPase complex, catalytic domain (50%) proton-transporting ATPase activity, rotational mechanism (50%) IPR002842 (100%) V-type ATPase subunit E (100%) WTCDGSPEFTIENVEKESR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005524 (24.6%) GO:0016887 (24.6%) GO:0051082 (24.6%)" "ATP binding (24.6%) ATP hydrolysis activity (24.6%) unfolded protein binding (24.6%)" "IPR001404 (20%) IPR019805 (20%) IPR020568 (20%)" "Heat shock protein Hsp90 family (20%) Heat shock protein Hsp90, conserved site (20%) Ribosomal protein uS5 domain 2-type superfamily (20%)" MGQVSALSEKLNCEVIAADATNVEDLENVFKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" FQNTQFTIADMETK Clostridia Bacteria Bacillati Bacillota Clostridia "1.3.8.1 (46.7%) 1.3.99.- (46.7%) 1.3.99.2 (6.7%)" "short-chain acyl-CoA dehydrogenase (46.7%) With other acceptors (46.7%) Transferred entry: 1.3.8.1 (6.7%)" "GO:0050660 (50%) GO:0003995 (45.6%) GO:0016937 (4.4%)" "flavin adenine dinucleotide binding (50%) acyl-CoA dehydrogenase activity (45.6%) short-chain fatty acyl-CoA dehydrogenase activity (4.4%)" "IPR006089 (12.5%) IPR006091 (12.5%) IPR009075 (12.5%)" "Acyl-CoA dehydrogenase, conserved site (12.5%) Acyl-CoA oxidase/dehydrogenase, middle domain (12.5%) Acyl-CoA dehydrogenase/oxidase, C-terminal (12.5%)" FLDILDELRVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.6.1.8 (93.6%) 3.6.1.9 (6.4%)" "ATP diphosphatase (93.6%) nucleotide diphosphatase (6.4%)" "GO:0006203 (12.5%) GO:0006950 (12.5%) GO:0046047 (12.5%)" "GO:0047429 (10.3%) GO:0047693 (2.1%) GO:0008168 (0.2%)" "dGTP catabolic process (12.5%) response to stress (12.5%) TTP catabolic process (12.5%)" "nucleoside triphosphate diphosphatase activity (10.3%) ATP diphosphatase activity (2.1%) methyltransferase activity (0.2%)" "IPR004518 (25.1%) IPR011551 (25.1%) IPR048015 (25.1%)" "NTP pyrophosphohydrolase MazG-like domain (25.1%) NTP pyrophosphohydrolase MazG (25.1%) MazG-like, N-terminal domain (25.1%)" DDDTADILTAASR root 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0006879 (14.1%) GO:0030261 (14.1%) GO:0006950 (0.2%)" "GO:0005737 (14.1%) GO:0009295 (13.6%) GO:0016020 (0.2%)" "GO:0008199 (14.4%) GO:0016722 (14.4%) GO:0003677 (14.2%)" "intracellular iron ion homeostasis (14.1%) chromosome condensation (14.1%) response to stress (0.2%)" "cytoplasm (14.1%) nucleoid (13.6%) membrane (0.2%)" "ferric iron binding (14.4%) oxidoreductase activity, acting on metal ions (14.4%) DNA binding (14.2%)" "IPR002177 (16.7%) IPR008331 (16.7%) IPR009078 (16.7%)" "DNA-binding protein Dps (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like superfamily (16.7%)" MAETPMGMLNAVGLQNK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "1.3.-.- (79.2%) 1.3.1.14 (20.8%)" "Acting on the CH-CH group of donors (79.2%) dihydroorotate dehydrogenase (NAD(+)) (20.8%)" "GO:0006207 (25%) GO:0044205 (25%)" GO:0005737 (25%) "GO:0004589 (13.4%) GO:0004152 (11.6%)" "'de novo' pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" cytoplasm (25%) "dihydroorotate dehydrogenase (NAD+) activity (13.4%) dihydroorotate dehydrogenase activity (11.6%)" "IPR001295 (12.5%) IPR005720 (12.5%) IPR012135 (12.5%)" "Dihydroorotate dehydrogenase, conserved site (12.5%) Dihydroorotate dehydrogenase, catalytic (12.5%) Dihydroorotate dehydrogenase, class 1/ 2 (12.5%)" IFTEDGVSIPVTVIEVEANRVTQVK root "GO:0006412 (24.8%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (24.9%) GO:0005840 (0.5%) GO:0005737 (0%)" "GO:0003735 (24.9%) GO:0019843 (24.8%)" "translation (24.8%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.9%) ribosome (0.5%) cytoplasm (0%)" "structural constituent of ribosome (24.9%) rRNA binding (24.8%)" "IPR009000 (25.1%) IPR019927 (25.1%) IPR000597 (24.7%)" "Translation protein, beta-barrel domain superfamily (25.1%) Large ribosomal subunit protein uL3, bacteria/organella (25.1%) Large ribosomal subunit protein uL3 (24.7%)" IYSEAHTMEEAEELGGQLIQIINEMCK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "5.4.2.10 (66.7%) 5.4.2.2 (33.3%)" "phosphoglucosamine mutase (66.7%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (33.3%)" "GO:0005975 (13.6%) GO:0006048 (13.6%) GO:0009252 (13.6%)" GO:0005829 (13.6%) "GO:0000287 (13.6%) GO:0004615 (13.6%) GO:0008966 (13.6%)" "carbohydrate metabolic process (13.6%) UDP-N-acetylglucosamine biosynthetic process (13.6%) peptidoglycan biosynthetic process (13.6%)" cytosol (13.6%) "magnesium ion binding (13.6%) phosphomannomutase activity (13.6%) phosphoglucosamine mutase activity (13.6%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" EVSVHREEIYQR root 6.1.1.7 (100%) alanine--tRNA ligase (100%) "GO:0006109 (16.7%) GO:0006402 (16.7%) GO:0045947 (16.7%)" "GO:0005829 (16.7%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0048027 (16.7%) GO:0000049 (0%) GO:0002161 (0%)" "regulation of carbohydrate metabolic process (16.7%) mRNA catabolic process (16.7%) negative regulation of translational initiation (16.7%)" "cytosol (16.7%) cytoplasm (0%) membrane (0%)" "mRNA 5'-UTR binding (16.7%) tRNA binding (0%) aminoacyl-tRNA deacylase activity (0%)" "IPR003751 (49.8%) IPR036107 (49.8%) IPR002318 (0%)" "Translational regulator CsrA (49.8%) Carbon storage regulator superfamily (49.8%) Alanine-tRNA ligase, class IIc (0%)" RLPAILTGDFNVDQTSESYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0000175 (52.9%) GO:0004519 (47.1%)" "3'-5'-RNA exonuclease activity (52.9%) endonuclease activity (47.1%)" "IPR005135 (33.3%) IPR036691 (33.3%) IPR050410 (33.3%)" "Endonuclease/exonuclease/phosphatase (33.3%) Endonuclease/exonuclease/phosphatase superfamily (33.3%) CCR4/nocturin mRNA turnover and transcription (33.3%)" NTFIGNCYNEFQENR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) GO:0009263 (25.5%) GO:0016020 (23.5%) "GO:0046872 (25.5%) GO:0004748 (21.6%) GO:0016491 (3.9%)" deoxyribonucleotide biosynthetic process (25.5%) membrane (23.5%) "metal ion binding (25.5%) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (21.6%) oxidoreductase activity (3.9%)" "IPR000358 (20%) IPR009078 (20%) IPR012348 (20%)" "Ribonucleotide reductase small subunit family (20%) Ferritin-like superfamily (20%) Ribonucleotide reductase-like (20%)" MINNIIAGNNTISADDLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.16 (100%) cysteine--tRNA ligase (100%) GO:0006423 (20%) GO:0005829 (20%) "GO:0004817 (20%) GO:0005524 (20%) GO:0008270 (20%)" cysteinyl-tRNA aminoacylation (20%) cytosol (20%) "cysteine-tRNA ligase activity (20%) ATP binding (20%) zinc ion binding (20%)" "IPR009080 (14.3%) IPR014729 (14.3%) IPR015273 (14.3%)" "Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (14.3%) Rossmann-like alpha/beta/alpha sandwich fold (14.3%) Cysteinyl-tRNA synthetase, class Ia, DALR (14.3%)" STQAIWINCQVPQTVSPGVYR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR025150 (50%) IPR053850 (50%)" "Glycoside hydrolase 123, catalytic domain (50%) Glycoside hydrolase 123, N-terminal domain (50%)" LIKDFTKDAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" MANSAEWERENWPDHEQGVGLAEAPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.12.99.6 (100%) hydrogenase (acceptor) (100%) GO:0030313 (31.8%) "GO:0008901 (31.8%) GO:0016151 (31.8%) GO:0033748 (4.5%)" cell envelope (31.8%) "ferredoxin hydrogenase activity (31.8%) nickel cation binding (31.8%) hydrogenase (acceptor) activity (4.5%)" "IPR001501 (25%) IPR018194 (25%) IPR029014 (25%)" "Nickel-dependent hydrogenase, large subunit (25%) Nickel-dependent hydrogenase, large subunit, nickel binding site (25%) [NiFe]-hydrogenase, large subunit (25%)" AIKGGYAIPAFNFNNMEQMQAIIK Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.6%) GO:0030388 (24.6%) GO:0005975 (0.4%)" GO:0016020 (0.2%) "GO:0008270 (25%) GO:0004332 (24.8%) GO:0016829 (0.2%)" "glycolytic process (24.6%) fructose 1,6-bisphosphate metabolic process (24.6%) carbohydrate metabolic process (0.4%)" membrane (0.2%) "zinc ion binding (25%) fructose-bisphosphate aldolase activity (24.8%) lyase activity (0.2%)" "IPR000771 (25.1%) IPR013785 (25.1%) IPR050246 (25.1%)" "Fructose-bisphosphate aldolase, class-II (25.1%) Aldolase-type TIM barrel (25.1%) Class II Fructose-bisphosphate Aldolase (25.1%)" IALEHMTPVVLLTDAFIANGSAAWK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.-.- (100%) Acting on the aldehyde or oxo group of donors (100%) GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.7%) IPR002880 (12.7%) IPR009014 (12.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.7%)" QILVEESLKGWK Bacteroidota Bacteria Pseudomonadati Bacteroidota "6.3.5.5 (80.5%) 6.3.4.16 (19.5%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (80.5%) carbamoyl-phosphate synthase (ammonia) (19.5%)" "GO:0006541 (13.8%) GO:0006221 (11.7%) GO:0006526 (11.5%)" GO:0005737 (13.8%) "GO:0004088 (13.8%) GO:0005524 (13.8%) GO:0046872 (13.8%)" "glutamine metabolic process (13.8%) pyrimidine nucleotide biosynthetic process (11.7%) L-arginine biosynthetic process (11.5%)" cytoplasm (13.8%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.8%) ATP binding (13.8%) metal ion binding (13.8%)" "IPR005479 (10.2%) IPR005483 (10.2%) IPR011761 (10.2%)" "Carbamoyl phosphate synthase, ATP-binding domain (10.2%) Carbamoyl phosphate synthase, CPSase domain (10.2%) ATP-grasp fold (10.2%)" GYKVTIQK root 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.5%) GO:0044210 (11.3%) GO:0006241 (0.2%)" "GO:0005829 (11.6%) GO:0097268 (11.2%) GO:0031010 (0.1%)" "GO:0005524 (11.7%) GO:0003883 (11.5%) GO:0042802 (11.5%)" "pyrimidine nucleobase biosynthetic process (11.5%) 'de novo' CTP biosynthetic process (11.3%) CTP biosynthetic process (0.2%)" "cytosol (11.6%) cytoophidium (11.2%) ISWI-type complex (0.1%)" "ATP binding (11.7%) CTP synthase activity (11.5%) identical protein binding (11.5%)" "IPR027417 (16.5%) IPR004468 (16.3%) IPR017456 (16.3%)" "P-loop containing nucleoside triphosphate hydrolase (16.5%) CTP synthase (16.3%) CTP synthase, N-terminal (16.3%)" NGLSYNLPLDEFMAVMDNAVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006508 (20.4%) GO:0009636 (19.7%) GO:0043418 (19.7%)" GO:0005737 (19.7%) GO:0070005 (20.4%) "proteolysis (20.4%) response to toxic substance (19.7%) homocysteine catabolic process (19.7%)" cytoplasm (19.7%) cysteine-type aminopeptidase activity (20.4%) "IPR004134 (46.9%) IPR038765 (46.9%) IPR000668 (6.3%)" "Peptidase C1B, bleomycin hydrolase (46.9%) Papain-like cysteine peptidase superfamily (46.9%) Peptidase C1A, papain C-terminal (6.3%)" AKYTYGVLEK Bacteria Bacteria "GO:0042274 (19.9%) GO:0006412 (19.9%)" "GO:0015935 (19.9%) GO:0005840 (0.2%) GO:0016020 (0.1%)" "GO:0019843 (20.1%) GO:0003735 (19.9%)" "ribosomal small subunit biogenesis (19.9%) translation (19.9%)" "small ribosomal subunit (19.9%) ribosome (0.2%) membrane (0.1%)" "rRNA binding (20.1%) structural constituent of ribosome (19.9%)" "IPR001912 (16.9%) IPR002942 (16.8%) IPR005709 (16.8%)" "Small ribosomal subunit protein uS4, N-terminal (16.9%) RNA-binding S4 domain (16.8%) Small ribosomal subunit protein uS4, bacteria (16.8%)" QKANIPGFRPGMVPMSLIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.5%) GO:0043335 (16.5%) GO:0051083 (16.5%)" "GO:0003755 (16.5%) GO:0043022 (16.5%) GO:0044183 (16.5%)" "protein transport (16.5%) protein unfolding (16.5%) 'de novo' cotranslational protein folding (16.5%)" "peptidyl-prolyl cis-trans isomerase activity (16.5%) ribosome binding (16.5%) protein folding chaperone (16.5%)" "IPR005215 (20.3%) IPR008881 (20.3%) IPR036611 (20.3%)" "Trigger factor (20.3%) Trigger factor, ribosome-binding, bacterial (20.3%) Trigger factor ribosome-binding domain superfamily (20.3%)" VSAKDKATGKEQAIR Pseudomonadati Bacteria Pseudomonadati "GO:0042026 (0.2%) GO:0051085 (0.2%)" "GO:0005737 (1.7%) GO:0070013 (0.2%)" "GO:0005524 (32.8%) GO:0140662 (32.8%) GO:0051082 (31.8%)" "protein refolding (0.2%) obsolete chaperone cofactor-dependent protein refolding (0.2%)" "cytoplasm (1.7%) intracellular organelle lumen (0.2%)" "ATP binding (32.8%) ATP-dependent protein folding chaperone (32.8%) unfolded protein binding (31.8%)" "IPR013126 (16.8%) IPR029047 (16.8%) IPR029048 (16.8%)" "Heat shock protein 70 family (16.8%) Heat shock protein 70kD, peptide-binding domain superfamily (16.8%) Heat shock protein 70kD, C-terminal domain superfamily (16.8%)" NALYEKPDFSDADGIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003439 (20%) IPR003593 (20%) IPR027417 (20%)" "ABC transporter-like, ATP-binding domain (20%) AAA+ ATPase domain (20%) P-loop containing nucleoside triphosphate hydrolase (20%)" LTAANGRPVADNQNVQTVGPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" GO:0005737 (16.7%) "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16.7%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" cytoplasm (16.7%) "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16.7%)" "IPR002226 (12.5%) IPR010582 (12.5%) IPR011614 (12.5%)" "Catalase haem-binding site (12.5%) Catalase immune-responsive domain (12.5%) Catalase core domain (12.5%)" ESELLGLLCAHANEILQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006355 (20%) GO:0000160 (0.4%)" "GO:0005829 (19.9%) GO:0032993 (19.9%)" "GO:0000156 (19.9%) GO:0000976 (19.9%) GO:0003677 (0.2%)" "regulation of DNA-templated transcription (20%) phosphorelay signal transduction system (0.4%)" "cytosol (19.9%) protein-DNA complex (19.9%)" "phosphorelay response regulator activity (19.9%) transcription cis-regulatory region binding (19.9%) DNA binding (0.2%)" "IPR001867 (17.3%) IPR036388 (17.3%) IPR001789 (17.2%)" "OmpR/PhoB-type DNA-binding domain (17.3%) Winged helix-like DNA-binding domain superfamily (17.3%) Signal transduction response regulator, receiver domain (17.2%)" ILSCALTIAEKNPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" AAVYAIADLAKEPVPDVVNAAYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (17.7%) "GO:0016746 (17.7%) GO:0046872 (17.7%) GO:0051287 (17.7%)" malate metabolic process (17.7%) "acyltransferase activity (17.7%) metal ion binding (17.7%) NAD binding (17.7%)" "IPR002505 (9.1%) IPR012188 (9.1%) IPR012301 (9.1%)" "Phosphate acetyl/butaryl transferase (9.1%) NAD(P)-dependent malic enzyme (9.1%) Malic enzyme, N-terminal domain (9.1%)" VGGSTYQVPVEVRPVR root "GO:0006412 (19.9%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0015935 (19.8%) GO:0005840 (0.3%) GO:0022627 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.9%) GO:0000049 (19.7%)" "translation (19.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "small ribosomal subunit (19.8%) ribosome (0.3%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%) tRNA binding (19.7%)" "IPR005717 (20.1%) IPR023798 (20.1%) IPR036823 (20.1%)" "Small ribosomal subunit protein uS7, bacteria/organella (20.1%) Small ribosomal subunit protein uS7 domain (20.1%) Small ribosomal subunit protein uS7 domain superfamily (20.1%)" NPIIISSSSLTNSAEKNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.3.1.1 (75%) 1.3.98.1 (25%)" "dihydrouracil dehydrogenase (NAD(+)) (75%) dihydroorotate oxidase (fumarate) (25%)" "GO:0006207 (23.9%) GO:0044205 (21.7%) GO:0006222 (2.2%)" GO:0005737 (23.9%) "GO:0004152 (20.7%) GO:0004159 (4.3%) GO:1990663 (3.3%)" "'de novo' pyrimidine nucleobase biosynthetic process (23.9%) 'de novo' UMP biosynthetic process (21.7%) UMP biosynthetic process (2.2%)" cytoplasm (23.9%) "dihydroorotate dehydrogenase activity (20.7%) dihydropyrimidine dehydrogenase (NAD+) activity (4.3%) dihydroorotate dehydrogenase (fumarate) activity (3.3%)" "IPR005720 (25%) IPR012135 (25%) IPR013785 (25%)" "Dihydroorotate dehydrogenase, catalytic (25%) Dihydroorotate dehydrogenase, class 1/ 2 (25%) Aldolase-type TIM barrel (25%)" LGIPLFYGGPSAAYFATR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" EFGISIPDDQAEKIGTVQDAVAYIEEHAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009245 (16.7%) "GO:0005829 (16.7%) GO:0016020 (16.7%)" "GO:0000035 (16.7%) GO:0000036 (16.7%) GO:0031177 (16.7%)" lipid A biosynthetic process (16.7%) "cytosol (16.7%) membrane (16.7%)" "acyl binding (16.7%) acyl carrier activity (16.7%) phosphopantetheine binding (16.7%)" "IPR003231 (20%) IPR006162 (20%) IPR009081 (20%)" "Acyl carrier protein (20%) Phosphopantetheine attachment site (20%) Phosphopantetheine binding ACP domain (20%)" MDHFMDWLAK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (30.6%) GO:0044814 (0%)" "GO:0005829 (31.9%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0008861 (32%) GO:0016829 (4.8%) GO:0016746 (0.4%)" "glucose metabolic process (30.6%) pyruvate fermentation via PFL (0%)" "cytosol (31.9%) cytoplasm (0.1%) membrane (0%)" "formate C-acetyltransferase activity (32%) lyase activity (4.8%) acyltransferase activity (0.4%)" "IPR004184 (20.5%) IPR050244 (20.5%) IPR001150 (19.9%)" "Pyruvate formate lyase domain (20.5%) Autonomous Glycyl Radical Cofactor (20.5%) Glycine radical domain (19.9%)" IYDLCAFIHDVIKPTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005829 (50%) GO:0016491 (50%) cytosol (50%) oxidoreductase activity (50%) IPR004017 (100%) Cysteine-rich domain (100%) YMPEIIENGHLYIANPPLYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (13%) GO:0006261 (11.6%)" "GO:0005737 (12.3%) GO:0005694 (11.6%)" "GO:0003677 (13%) GO:0005524 (13%) GO:0046872 (12.3%)" "DNA topological change (13%) DNA-templated DNA replication (11.6%)" "cytoplasm (12.3%) chromosome (11.6%)" "DNA binding (13%) ATP binding (13%) metal ion binding (12.3%)" "IPR000565 (7.9%) IPR001241 (7.9%) IPR006171 (7.9%)" "DNA topoisomerase, type IIA, subunit B (7.9%) DNA topoisomerase, type IIA (7.9%) TOPRIM domain (7.9%)" CPFHQGGHDQSAGAGTTTR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.11.1.21 (90.3%) 1.11.1.6 (8.7%) 1.11.1.7 (1%)" "catalase peroxidase (90.3%) catalase (8.7%) peroxidase (1%)" "GO:0042744 (16.6%) GO:0070301 (16.6%) GO:0006979 (0.2%)" GO:0005829 (16.6%) "GO:0004096 (16.6%) GO:0020037 (16.6%) GO:0046872 (15.8%)" "hydrogen peroxide catabolic process (16.6%) cellular response to hydrogen peroxide (16.6%) response to oxidative stress (0.2%)" cytosol (16.6%) "catalase activity (16.6%) heme binding (16.6%) metal ion binding (15.8%)" "IPR000763 (20.9%) IPR010255 (20.9%) IPR019794 (20%)" "Catalase-peroxidase haem (20.9%) Haem peroxidase superfamily (20.9%) Peroxidase, active site (20%)" IAVVGSGPAGLSFAGDMAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.4.1.13 (94.7%) 1.4.1.14 (5.3%)" "glutamate synthase (NADPH) (94.7%) glutamate synthase (NADH) (5.3%)" "GO:0051536 (47.9%) GO:0016491 (27.7%) GO:0004355 (19.3%)" "iron-sulfur cluster binding (47.9%) oxidoreductase activity (27.7%) glutamate synthase (NADPH) activity (19.3%)" "IPR009051 (16.1%) IPR028261 (16.1%) IPR036188 (16.1%)" "Alpha-helical ferredoxin (16.1%) Dihydroprymidine dehydrogenase domain II (16.1%) FAD/NAD(P)-binding domain superfamily (16.1%)" TYFPHFDLSHGSAQVK Metazoa Eukaryota Metazoa "GO:0042744 (8.4%) GO:0098869 (0.2%) GO:0015671 (0.2%)" "GO:0005833 (9.8%) GO:0031838 (8.5%) GO:0072562 (8.1%)" "GO:0005344 (9.8%) GO:0019825 (9.8%) GO:0020037 (9.8%)" "hydrogen peroxide catabolic process (8.4%) cellular oxidant detoxification (0.2%) oxygen transport (0.2%)" "hemoglobin complex (9.8%) haptoglobin-hemoglobin complex (8.5%) blood microparticle (8.1%)" "oxygen carrier activity (9.8%) oxygen binding (9.8%) heme binding (9.8%)" "IPR000971 (17%) IPR002338 (17%) IPR009050 (17%)" "Globin (17%) Hemoglobin, alpha-type (17%) Globin-like superfamily (17%)" VMPEHNLLLVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" VGEGIVSSIGSSESHKTVLENPDSISK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005886 (54.5%) GO:0045121 (45.5%)" "plasma membrane (54.5%) membrane raft (45.5%)" IPR022853 (100%) Flotillin-like protein FloA (100%) DANAQIENGNK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0003677 (50%) GO:0030527 (50%)" "DNA binding (50%) structural constituent of chromatin (50%)" IPR010886 (100%) Histone H1-like Hc1 (100%) FGGATGNYNAHHVAYPEYDWK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (25.1%) GO:0044208 (25.1%) GO:0006188 (4.2%)" "GO:0004018 (29.3%) GO:0070626 (15.3%) GO:0016829 (1%)" "'de novo' IMP biosynthetic process (25.1%) 'de novo' AMP biosynthetic process (25.1%) IMP biosynthetic process (4.2%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (29.3%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (15.3%) lyase activity (1%)" "IPR000362 (12.6%) IPR008948 (12.6%) IPR022761 (12.6%)" "Fumarate lyase family (12.6%) L-Aspartase-like (12.6%) Fumarate lyase, N-terminal (12.6%)" AIKPVNEADTEKMMAILNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (25.3%) "GO:0003746 (25.3%) GO:0005525 (25.3%) GO:0003924 (24.2%)" ribosome disassembly (25.3%) "translation elongation factor activity (25.3%) GTP binding (25.3%) GTPase activity (24.2%)" "IPR000640 (7.4%) IPR005517 (7.4%) IPR009000 (7.4%)" "Elongation factor EFG, domain V-like (7.4%) Translation elongation factor EFG/EF2, domain IV (7.4%) Translation protein, beta-barrel domain superfamily (7.4%)" YTEQFHKPVIFVVNQLDNDKADYEGTIAQLKDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" DDICPDENKEMYNTVFKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004824 (16.7%)" lysyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) lysine-tRNA ligase activity (16.7%)" "IPR002313 (12.7%) IPR004364 (12.7%) IPR004365 (12.7%)" "Lysine-tRNA ligase, class II (12.7%) Aminoacyl-tRNA synthetase, class II (D/K/N) (12.7%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (12.7%)" MYSELTTDHPIDLCR Bacteroidota Bacteria Pseudomonadati Bacteroidota 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (49.5%) "GO:0004332 (49.5%) GO:0016829 (1%)" glycolytic process (49.5%) "fructose-bisphosphate aldolase activity (49.5%) lyase activity (1%)" "IPR002915 (25.1%) IPR013785 (25.1%) IPR050456 (25.1%)" "DeoC/FbaB/LacD aldolase (25.1%) Aldolase-type TIM barrel (25.1%) DeoC/FbaB aldolase (25.1%)" KVTMQNLYHDGGFSSVGMSLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (49.2%) GO:0004318 (50.8%) fatty acid biosynthetic process (49.2%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50.8%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" LLDTLGITETIGPIQMGLNKPIHFTDVESSTR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (17.6%) "GO:0016746 (17.6%) GO:0046872 (17.6%) GO:0051287 (17.6%)" malate metabolic process (17.6%) "acyltransferase activity (17.6%) metal ion binding (17.6%) NAD binding (17.6%)" "IPR002505 (9.1%) IPR012188 (9.1%) IPR012301 (9.1%)" "Phosphate acetyl/butaryl transferase (9.1%) NAD(P)-dependent malic enzyme (9.1%) Malic enzyme, N-terminal domain (9.1%)" HQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGK root "GO:0006412 (16.6%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (17%) GO:1990904 (16.5%) GO:0005829 (16.3%)" "GO:0003735 (16.6%) GO:0019843 (16.6%) GO:0000049 (0.1%)" "translation (16.6%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (17%) ribonucleoprotein complex (16.5%) cytosol (16.3%)" "structural constituent of ribosome (16.6%) rRNA binding (16.6%) tRNA binding (0.1%)" "IPR003256 (14.4%) IPR008991 (14.4%) IPR014722 (14.4%)" "Large ribosomal subunit protein uL24 (14.4%) Translation protein SH3-like domain superfamily (14.4%) Large ribosomal subunit protein uL2, domain 2 (14.4%)" AKDFQPVVDEAVALFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (19.5%)" "GO:0005737 (20%) GO:0016020 (0.2%)" "GO:0004648 (20%) GO:0030170 (20%) GO:0008483 (0.5%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (19.5%)" "cytoplasm (20%) membrane (0.2%)" "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%) transaminase activity (0.5%)" "IPR000192 (20.2%) IPR022278 (20.2%) IPR015421 (20%)" "Aminotransferase class V domain (20.2%) Phosphoserine aminotransferase (20.2%) Pyridoxal phosphate-dependent transferase, major domain (20%)" DTLEKETITCDGIEEYVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.1%) IPR004154 (11.1%) IPR004499 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Anticodon-binding (11.1%) Proline-tRNA ligase, class IIa, archaeal-type (11.1%)" AIEYLNTAIAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" TNVLTASAGEAIMAHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0009409 (10%) GO:0000027 (9.5%) GO:0010467 (8.9%)" "GO:0005829 (10.2%) GO:1990904 (10.2%)" "GO:0005525 (10.4%) GO:0003924 (10.2%) GO:0000049 (9.5%)" "response to cold (10%) ribosomal large subunit assembly (9.5%) gene expression (8.9%)" "cytosol (10.2%) ribonucleoprotein complex (10.2%)" "GTP binding (10.4%) GTPase activity (10.2%) tRNA binding (9.5%)" "IPR000640 (7%) IPR035647 (7%) IPR035651 (7%)" "Elongation factor EFG, domain V-like (7%) EF-G domain III/V-like (7%) BipA, domain V (7%)" NAITNNDINK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006508 (20%) GO:0009636 (20%) GO:0043418 (20%)" GO:0005737 (20%) GO:0070005 (20%) "proteolysis (20%) response to toxic substance (20%) homocysteine catabolic process (20%)" cytoplasm (20%) cysteine-type aminopeptidase activity (20%) "IPR000169 (33.3%) IPR004134 (33.3%) IPR038765 (33.3%)" "Cysteine peptidase, cysteine active site (33.3%) Peptidase C1B, bleomycin hydrolase (33.3%) Papain-like cysteine peptidase superfamily (33.3%)" SMNSDCAVATSGIAGPTGGTPDKPVGTIWIAAGCKDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.1.42 (100%) nicotinamide-nucleotide amidase (100%) "GO:0016787 (50%) GO:0019159 (50%)" "hydrolase activity (50%) nicotinamide-nucleotide amidase activity (50%)" "IPR008136 (50%) IPR036653 (50%)" "CinA, C-terminal (50%) CinA-like, C-terminal (50%)" LAEDATDEEKAAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" GIIFCSFSEAVQHHPDLVQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR010231 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufB (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" AFANPYNAAQYGYIDDVIEPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.-.-.- (50%) 6.4.1.3 (50%)" "Ligases (50%) propionyl-CoA carboxylase (50%)" GO:0015977 (22.5%) GO:0009317 (22.5%) "GO:0004658 (24.7%) GO:0003989 (22.5%) GO:0016740 (7.9%)" carbon fixation (22.5%) acetyl-CoA carboxylase complex (22.5%) "propionyl-CoA carboxylase activity (24.7%) acetyl-CoA carboxylase activity (22.5%) transferase activity (7.9%)" "IPR011763 (20.2%) IPR029045 (20.2%) IPR034733 (20.2%)" "Acetyl-coenzyme A carboxyltransferase, C-terminal (20.2%) ClpP/crotonase-like domain superfamily (20.2%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.2%)" MIGPNCPGVITPGECK root 6.2.1.5 (100%) succinate--CoA ligase (ADP-forming) (100%) "GO:0006099 (19.9%) GO:0006104 (0%) GO:0006086 (0%)" "GO:0009361 (19.8%) GO:0042709 (0.1%) GO:0005739 (0.1%)" "GO:0004775 (19.9%) GO:0004776 (19.8%) GO:0000166 (19.6%)" "tricarboxylic acid cycle (19.9%) succinyl-CoA metabolic process (0%) pyruvate decarboxylation to acetyl-CoA (0%)" "succinate-CoA ligase complex (ADP-forming) (19.8%) succinate-CoA ligase complex (0.1%) mitochondrion (0.1%)" "succinate-CoA ligase (ADP-forming) activity (19.9%) succinate-CoA ligase (GDP-forming) activity (19.8%) nucleotide binding (19.6%)" "IPR016102 (14.3%) IPR005811 (14.2%) IPR036291 (14.2%)" "Succinyl-CoA synthetase-like (14.3%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.2%) NAD(P)-binding domain superfamily (14.2%)" GLPASPGAATGQIVFFADDAAEWHAAGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0016301 (25.1%) GO:0050242 (25.1%) GO:0005524 (24.8%)" "kinase activity (25.1%) pyruvate, phosphate dikinase activity (25.1%) ATP binding (24.8%)" "IPR010121 (10.1%) IPR000121 (10%) IPR002192 (10%)" "Pyruvate, phosphate dikinase (10.1%) PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%)" STVGHDLNIDVCSK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006412 (16.4%) GO:0002181 (0.2%) GO:0006413 (0.2%)" "GO:0005840 (17.7%) GO:1990904 (16.3%) GO:0005737 (0.2%)" "GO:0003735 (16.4%) GO:0019843 (16.1%) GO:0046872 (15.9%)" "translation (16.4%) cytoplasmic translation (0.2%) translational initiation (0.2%)" "ribosome (17.7%) ribonucleoprotein complex (16.3%) cytoplasm (0.2%)" "structural constituent of ribosome (16.4%) rRNA binding (16.1%) metal ion binding (15.9%)" "IPR002150 (25.1%) IPR034704 (25.1%) IPR042105 (25.1%)" "Large ribosomal subunit protein bL31 type A/B (25.1%) Large ribosomal subunit protein bL28/bL31-like superfamily (25.1%) Large ribosomal subunit protein bL31 superfamily (25.1%)" DVNKLPVAAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR021533 (100%) Putative beta-lactamase-inhibitor-like, PepSY-like (100%) YVPETDYVVK Pseudomonadati Bacteria Pseudomonadati 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) GO:0033539 (33.2%) "GO:0009055 (33.2%) GO:0050660 (33.2%) GO:0016491 (0.4%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (33.2%) "electron transfer activity (33.2%) flavin adenine dinucleotide binding (33.2%) oxidoreductase activity (0.4%)" "IPR001308 (16.8%) IPR014729 (16.8%) IPR014730 (16.6%)" "Electron transfer flavoprotein alpha subunit/FixB (16.8%) Rossmann-like alpha/beta/alpha sandwich fold (16.8%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.6%)" ACAAEKEAEYKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.-.-.- (100%) Ligases (100%) GO:0015977 (23.1%) GO:0009317 (23.1%) "GO:0003989 (23.1%) GO:0004658 (23.1%) GO:0016740 (7.7%)" carbon fixation (23.1%) acetyl-CoA carboxylase complex (23.1%) "acetyl-CoA carboxylase activity (23.1%) propionyl-CoA carboxylase activity (23.1%) transferase activity (7.7%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" EDKGVIIGQLAETVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" ITDIMFNGTDEDLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0006633 (7.8%) GO:0005829 (7.8%) "GO:0004314 (82.2%) GO:0016746 (1.6%) GO:0016740 (0.8%)" fatty acid biosynthetic process (7.8%) cytosol (7.8%) "[acyl-carrier-protein] S-malonyltransferase activity (82.2%) acyltransferase activity (1.6%) transferase activity (0.8%)" "IPR001227 (14.4%) IPR014043 (14.4%) IPR016035 (14.4%)" "Acyl transferase domain superfamily (14.4%) Acyl transferase domain (14.4%) Acyl transferase/acyl hydrolase/lysophospholipase (14.4%)" AIVDKVILAATAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.6.2.2 (97.6%) 5.99.1.3 (2.4%)" "DNA topoisomerase (ATP-hydrolyzing) (97.6%) Transferred entry: 5.6.2.2 (2.4%)" "GO:0006265 (13.7%) GO:0006261 (11%) GO:0032259 (0.3%)" "GO:0005737 (11.6%) GO:0005694 (11%)" "GO:0003677 (13.7%) GO:0005524 (13.7%) GO:0046872 (11%)" "DNA topological change (13.7%) DNA-templated DNA replication (11%) methylation (0.3%)" "cytoplasm (11.6%) chromosome (11%)" "DNA binding (13.7%) ATP binding (13.7%) metal ion binding (11%)" "IPR000565 (7.7%) IPR001241 (7.7%) IPR006171 (7.7%)" "DNA topoisomerase, type IIA, subunit B (7.7%) DNA topoisomerase, type IIA (7.7%) TOPRIM domain (7.7%)" AIVWLCQLTDKPILK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.5%) GO:0006044 (32.5%)" "GO:0004342 (32.5%) GO:0016853 (2.5%)" "carbohydrate metabolic process (32.5%) N-acetylglucosamine metabolic process (32.5%)" "glucosamine-6-phosphate deaminase activity (32.5%) isomerase activity (2.5%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" KVIVFSPHPDDDVISMGGTIR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "3.5.99.6 (96.6%) 3.1.1.31 (3.4%)" "glucosamine-6-phosphate deaminase (96.6%) 6-phosphogluconolactonase (3.4%)" "GO:0005975 (32.4%) GO:0006044 (31.9%) GO:0006046 (0.5%)" "GO:0004342 (32.4%) GO:0016853 (1.6%) GO:0016787 (1.1%)" "carbohydrate metabolic process (32.4%) N-acetylglucosamine metabolic process (31.9%) N-acetylglucosamine catabolic process (0.5%)" "glucosamine-6-phosphate deaminase activity (32.4%) isomerase activity (1.6%) hydrolase activity (1.1%)" "IPR003737 (17.3%) IPR052960 (17.3%) IPR024078 (16.5%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (17.3%) Glucosamine-6-phosphate deaminase-like (17.3%) Putative deacetylase LmbE-like domain superfamily (16.5%)" IVEFIEKPDEPQTLDSDLMAVGR root 2.7.7.9 (100%) UTP--glucose-1-phosphate uridylyltransferase (100%) "GO:0006011 (24.3%) GO:0009103 (15.8%) GO:0045227 (0.1%)" GO:0005829 (19.1%) "GO:0003983 (24.3%) GO:0030234 (15.8%) GO:0016779 (0.4%)" "UDP-alpha-D-glucose metabolic process (24.3%) lipopolysaccharide biosynthetic process (15.8%) capsule polysaccharide biosynthetic process (0.1%)" cytosol (19.1%) "UTP:glucose-1-phosphate uridylyltransferase activity (24.3%) enzyme regulator activity (15.8%) nucleotidyltransferase activity (0.4%)" "IPR005771 (27.4%) IPR005835 (27.4%) IPR029044 (27.4%)" "UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type (27.4%) Nucleotidyl transferase domain (27.4%) Nucleotide-diphospho-sugar transferases (27.4%)" ILDPRDTYADPAQWDEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.2%) GO:0005829 (18.2%) "GO:0004612 (18.2%) GO:0005524 (18.2%) GO:0046872 (18.2%)" gluconeogenesis (18.2%) cytosol (18.2%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.2%) ATP binding (18.2%) metal ion binding (18.2%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" AIIDFPAVYDMLAIMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.8.1 (100%) short-chain acyl-CoA dehydrogenase (100%) "GO:0050660 (50%) GO:0003995 (38.9%) GO:0016937 (11.1%)" "flavin adenine dinucleotide binding (50%) acyl-CoA dehydrogenase activity (38.9%) short-chain fatty acyl-CoA dehydrogenase activity (11.1%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009075 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.1%)" DGVTVAKEVELTCPFENMGAQLVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.5%) GO:0005737 (15%) "GO:0005524 (17.5%) GO:0016853 (17.5%) GO:0140662 (17.5%)" protein refolding (17.5%) cytoplasm (15%) "ATP binding (17.5%) isomerase activity (17.5%) ATP-dependent protein folding chaperone (17.5%)" "IPR001844 (17.1%) IPR002423 (17.1%) IPR027409 (17.1%)" "Chaperonin Cpn60/GroEL (17.1%) Chaperonin Cpn60/GroEL/TCP-1 family (17.1%) GroEL-like apical domain superfamily (17.1%)" KVSKLEQYFDGIILAEVTLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003489 (50%) IPR036567 (50%)" "Ribosome hibernation promoting factor/RaiA (50%) Ribosome hibernation promotion factor-like (50%)" AIQIGLKPIVVINK Pseudomonadati Bacteria Pseudomonadati 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0000027 (9.5%) GO:0009409 (8.7%) GO:0010467 (8.6%)" "GO:0005829 (9.9%) GO:1990904 (9.9%) GO:0005737 (0.9%)" "GO:0003924 (10.8%) GO:0005525 (10.8%) GO:0000049 (9.5%)" "ribosomal large subunit assembly (9.5%) response to cold (8.7%) gene expression (8.6%)" "cytosol (9.9%) ribonucleoprotein complex (9.9%) cytoplasm (0.9%)" "GTPase activity (10.8%) GTP binding (10.8%) tRNA binding (9.5%)" "IPR000640 (6.7%) IPR000795 (6.7%) IPR005225 (6.7%)" "Elongation factor EFG, domain V-like (6.7%) Translational (tr)-type GTP-binding domain (6.7%) Small GTP-binding domain (6.7%)" FTRVDSDVIDHLIAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005524 (24.3%) GO:0016887 (24.3%) GO:0051082 (24.3%)" "ATP binding (24.3%) ATP hydrolysis activity (24.3%) unfolded protein binding (24.3%)" "IPR001404 (20.7%) IPR020568 (20.7%) IPR019805 (19.5%)" "Heat shock protein Hsp90 family (20.7%) Ribosomal protein uS5 domain 2-type superfamily (20.7%) Heat shock protein Hsp90, conserved site (19.5%)" FVNHLMYDGKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (20.1%) GO:0000028 (0.1%)" "GO:0015935 (20.1%) GO:0005840 (0.2%) GO:0022627 (0.1%)" "GO:0003735 (20.1%) GO:0019843 (20.1%) GO:0000049 (19.1%)" "translation (20.1%) ribosomal small subunit assembly (0.1%)" "small ribosomal subunit (20.1%) ribosome (0.2%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (20.1%) rRNA binding (20.1%) tRNA binding (19.1%)" "IPR023798 (24.9%) IPR036823 (24.9%) IPR000235 (24.8%)" "Small ribosomal subunit protein uS7 domain (24.9%) Small ribosomal subunit protein uS7 domain superfamily (24.9%) Small ribosomal subunit protein uS7 (24.8%)" GQYSPTSDRGFVSK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "1.2.7.3 (45.5%) 1.2.-.- (36.4%) 1.2.7.11 (18.2%)" "2-oxoglutarate synthase (45.5%) Acting on the aldehyde or oxo group of donors (36.4%) 2-oxoacid oxidoreductase (ferredoxin) (18.2%)" GO:0044281 (32.6%) "GO:0030976 (33.7%) GO:0016625 (32.6%) GO:0047553 (1.2%)" small molecule metabolic process (32.6%) "thiamine pyrophosphate binding (33.7%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (32.6%) 2-oxoglutarate synthase activity (1.2%)" "IPR011766 (33%) IPR029061 (33%) IPR051457 (33%)" "Thiamine pyrophosphate enzyme, TPP-binding (33%) Thiamin diphosphate-binding fold (33%) 2-oxoacid:ferredoxin oxidoreductase (33%)" QHNYAIVDEVDSVLIDDAR root 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.2%) GO:0017038 (11.2%) GO:0043952 (11%)" "GO:0005886 (11.2%) GO:0005829 (11%) GO:0031522 (11%)" "GO:0005524 (11.2%) GO:0046872 (10.7%) GO:0008564 (0.2%)" "protein targeting (11.2%) protein import (11.2%) protein transport by the Sec complex (11%)" "plasma membrane (11.2%) cytosol (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11.2%) metal ion binding (10.7%) protein-exporting ATPase activity (0.2%)" "IPR000185 (7.8%) IPR011115 (7.8%) IPR014001 (7.8%)" "Protein translocase subunit SecA (7.8%) SecA DEAD-like, N-terminal (7.8%) Helicase superfamily 1/2, ATP-binding domain (7.8%)" SVNLVMGEVTIPVDGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR032573 (100%) Protein of unknown function DUF4925 (100%) AYIDEQNSEQIAAQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (25%) GO:0005829 (25%) "GO:0004819 (25%) GO:0005524 (25%)" glutaminyl-tRNA aminoacylation (25%) cytosol (25%) "glutamine-tRNA ligase activity (25%) ATP binding (25%)" "IPR001412 (10.2%) IPR004514 (10.2%) IPR020058 (10.2%)" "Aminoacyl-tRNA synthetase, class I, conserved site (10.2%) Glutamine-tRNA synthetase (10.2%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (10.2%)" SGGYSGWEPNVDSPILK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25.3%) GO:0005829 (25.3%) "GO:0070573 (25.3%) GO:0046872 (24.2%)" proteolysis (25.3%) cytosol (25.3%) "metallodipeptidase activity (25.3%) metal ion binding (24.2%)" "IPR001160 (25.8%) IPR002933 (25.8%) IPR011650 (24.7%)" "Peptidase M20C, Xaa-His dipeptidase (25.8%) Peptidase M20 (25.8%) Peptidase M20, dimerisation domain (24.7%)" VVAAAIEQNYDER root 6.1.1.15 (100%) proline--tRNA ligase (100%) "GO:0006433 (20%) GO:0106074 (0.1%)" GO:0005829 (20%) "GO:0004827 (20%) GO:0005524 (20%) GO:0002161 (19.2%)" "prolyl-tRNA aminoacylation (20%) aminoacyl-tRNA metabolism involved in translational fidelity (0.1%)" cytosol (20%) "proline-tRNA ligase activity (20%) ATP binding (20%) aminoacyl-tRNA deacylase activity (19.2%)" "IPR050062 (8%) IPR045864 (8%) IPR036621 (7.9%)" "Proline-tRNA synthetase (8%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (8%) Anticodon-binding domain superfamily (7.9%)" IVFITGASSGIGEGCAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.- (45.5%) 1.1.1.381 (45.5%) 1.1.1.276 (9.1%)" "With NAD(+) or NADP(+) as acceptor (45.5%) 3-hydroxy acid dehydrogenase (45.5%) serine 3-dehydrogenase (NADP(+)) (9.1%)" "GO:0016616 (98.2%) GO:0031132 (1.8%)" "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (98.2%) serine 3-dehydrogenase activity (1.8%)" "IPR002347 (33.3%) IPR020904 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Short-chain dehydrogenase/reductase, conserved site (33.3%) NAD(P)-binding domain superfamily (33.3%)" ILLRPQEISNNPEVARR Bacteria Bacteria "2.8.3.- (80%) 2.8.3.18 (10%) 3.1.2.1 (10%)" "CoA-transferases (80%) succinyl-CoA:acetate CoA-transferase (10%) acetyl-CoA hydrolase (10%)" "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" ITPVLSGEMHYAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) "GO:0004565 (47.6%) GO:0004553 (2.4%)" carbohydrate metabolic process (50%) "beta-galactosidase activity (47.6%) hydrolase activity, hydrolyzing O-glycosyl compounds (2.4%)" "IPR001944 (12.9%) IPR017853 (12.9%) IPR031330 (12.9%)" "Glycoside hydrolase, family 35 (12.9%) Glycoside hydrolase superfamily (12.9%) Glycoside hydrolase 35, catalytic domain (12.9%)" ILDIIPETLHQR root 3.1.3.11 (100%) fructose-bisphosphatase (100%) "GO:0006000 (12.5%) GO:0006002 (12.5%) GO:0006094 (12.5%)" "GO:0005829 (12.5%) GO:0005737 (0.1%) GO:0032991 (0.1%)" "GO:0042132 (12.5%) GO:0000287 (11%) GO:0046872 (0.8%)" "fructose metabolic process (12.5%) fructose 6-phosphate metabolic process (12.5%) gluconeogenesis (12.5%)" "cytosol (12.5%) cytoplasm (0.1%) protein-containing complex (0.1%)" "fructose 1,6-bisphosphate 1-phosphatase activity (12.5%) magnesium ion binding (11%) metal ion binding (0.8%)" "IPR000146 (20.6%) IPR044015 (20.6%) IPR020548 (20.1%)" "Fructose-1,6-bisphosphatase class 1 (20.6%) Fructose-1-6-bisphosphatase class 1, C-terminal (20.6%) Fructose-1,6-bisphosphatase, active site (20.1%)" VEKEGTGAKPTATDKVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" SYPLDIHNVQDHLKELADR root 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0006879 (14.3%) GO:0030261 (14.3%) GO:0006950 (0%)" "GO:0005737 (14.3%) GO:0009295 (13.6%) GO:0016020 (0%)" "GO:0008199 (14.4%) GO:0016722 (14.4%) GO:0003677 (14.3%)" "intracellular iron ion homeostasis (14.3%) chromosome condensation (14.3%) response to stress (0%)" "cytoplasm (14.3%) nucleoid (13.6%) membrane (0%)" "ferric iron binding (14.4%) oxidoreductase activity, acting on metal ions (14.4%) DNA binding (14.3%)" "IPR002177 (16.7%) IPR008331 (16.7%) IPR009078 (16.7%)" "DNA-binding protein Dps (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like superfamily (16.7%)" ELPELTAEFIK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.6%) GO:0051301 (12.4%) GO:0043335 (11.4%)" "GO:0005737 (12.3%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0003755 (12.7%) GO:0043022 (11.4%) GO:0044183 (11.4%)" "protein transport (12.6%) cell division (12.4%) protein unfolding (11.4%)" "cytoplasm (12.3%) cytosol (0.1%) membrane (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (12.7%) ribosome binding (11.4%) protein folding chaperone (11.4%)" "IPR037041 (13%) IPR001179 (12.8%) IPR046357 (12.7%)" "Trigger factor, C-terminal domain superfamily (13%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (12.8%) Peptidyl-prolyl cis-trans isomerase domain superfamily (12.7%)" NMFALLNKPGYEEESKAIQAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.2%) GO:0006096 (14.2%) GO:0051156 (14.2%)" GO:0005829 (14.2%) "GO:0004347 (14.2%) GO:0048029 (14.2%) GO:0097367 (14.2%)" "gluconeogenesis (14.2%) glycolytic process (14.2%) glucose 6-phosphate metabolic process (14.2%)" cytosol (14.2%) "glucose-6-phosphate isomerase activity (14.2%) monosaccharide binding (14.2%) carbohydrate derivative binding (14.2%)" "IPR001672 (20%) IPR018189 (20%) IPR035482 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 2 (20%)" NSINHNLLANMPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (44%) GO:0016616 (36%) GO:0016787 (12%)" "NAD binding (44%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (36%) hydrolase activity (12%)" "IPR006139 (33.3%) IPR006140 (33.3%) IPR036291 (33.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" TLYGCTFALLNHGLTR Bacteria Bacteria "4.4.1.11 (54.8%) 4.4.1.2 (45.2%)" "methionine gamma-lyase (54.8%) homocysteine desulfhydrase (45.2%)" "GO:0019346 (22.7%) GO:0006355 (0.6%)" GO:0005737 (22.7%) "GO:0018826 (22.7%) GO:0030170 (22.7%) GO:0047982 (6.6%)" "transsulfuration (22.7%) regulation of DNA-templated transcription (0.6%)" cytoplasm (22.7%) "methionine gamma-lyase activity (22.7%) pyridoxal phosphate binding (22.7%) homocysteine desulfhydrase activity (6.6%)" "IPR000277 (16.5%) IPR006237 (16.5%) IPR015421 (16.2%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (16.5%) L-methionine gamma-lyase (16.5%) Pyridoxal phosphate-dependent transferase, major domain (16.2%)" LHEEGVDPVVAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.1.2.- (80%) 3.1.-.- (20%)" "Thiolester hydrolases (80%) Acting on ester bonds (20%)" GO:0047617 (100%) fatty acyl-CoA hydrolase activity (100%) "IPR029069 (50%) IPR050563 (50%)" "HotDog domain superfamily (50%) 4-hydroxybenzoyl-CoA thioesterase (50%)" TREEFMNLIR Bacteria Bacteria 3.5.4.16 (100%) GTP cyclohydrolase I (100%) "GO:0006729 (14.3%) GO:0046654 (14.3%) GO:0006730 (13.9%)" GO:0005737 (14.3%) "GO:0003934 (14.3%) GO:0005525 (14.3%) GO:0008270 (14.3%)" "tetrahydrobiopterin biosynthetic process (14.3%) tetrahydrofolate biosynthetic process (14.3%) one-carbon metabolic process (13.9%)" cytoplasm (14.3%) "GTP cyclohydrolase I activity (14.3%) GTP binding (14.3%) zinc ion binding (14.3%)" "IPR001474 (20%) IPR018234 (20%) IPR020602 (20%)" "GTP cyclohydrolase I (20%) GTP cyclohydrolase I, conserved site (20%) GTP cyclohydrolase I domain (20%)" SKDAEAILTNK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.29 (100%) glycerate dehydrogenase (100%) "GO:0051287 (50%) GO:0016616 (37.5%) GO:0008465 (9.4%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (37.5%) hydroxypyruvate reductase (NADH) activity (9.4%)" "IPR006139 (20%) IPR006140 (20%) IPR029753 (20%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (20%)" SNQTWLPSIFNDFFDNDWMVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" VNLVEQLESLSVTK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.1.1.65 (100%) phosphatidylserine decarboxylase (100%) "GO:0006646 (32.5%) GO:0008654 (1.4%) GO:0016540 (0.2%)" GO:0005886 (30%) "GO:0004609 (34.1%) GO:0016829 (1.4%) GO:0042803 (0.2%)" "phosphatidylethanolamine biosynthetic process (32.5%) phospholipid biosynthetic process (1.4%) protein autoprocessing (0.2%)" plasma membrane (30%) "phosphatidylserine decarboxylase activity (34.1%) lyase activity (1.4%) protein homodimerization activity (0.2%)" "IPR003817 (35.1%) IPR033177 (33.7%) IPR033178 (31.2%)" "Phosphatidylserine decarboxylase-related (35.1%) Phosphatidylserine decarboxylase, bacterial/eukaryotic (33.7%) Phosphatidylserine decarboxylase, prokaryotic type 1 (31.2%)" VHFLDLPFYETGKIEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (33.3%) GO:0006044 (33.3%)" GO:0004342 (33.3%) "carbohydrate metabolic process (33.3%) N-acetylglucosamine metabolic process (33.3%)" glucosamine-6-phosphate deaminase activity (33.3%) "IPR003737 (14.7%) IPR004547 (14.7%) IPR006148 (14.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.7%) Glucosamine-6-phosphate isomerase (14.7%) Glucosamine/galactosamine-6-phosphate isomerase (14.7%)" GMEHLMDFSNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" FINELLPVIDSLDR root "GO:0006457 (16.5%) GO:0009408 (0.1%) GO:0043335 (0.1%)" "GO:0005829 (16.5%) GO:0005737 (0.1%) GO:0005759 (0.1%)" "GO:0000774 (16.6%) GO:0042803 (16.6%) GO:0051082 (16.6%)" "protein folding (16.5%) response to heat (0.1%) protein unfolding (0.1%)" "cytosol (16.5%) cytoplasm (0.1%) mitochondrial matrix (0.1%)" "adenyl-nucleotide exchange factor activity (16.6%) protein homodimerization activity (16.6%) unfolded protein binding (16.6%)" "IPR000740 (35.6%) IPR013805 (35.6%) IPR009012 (28.7%)" "GrpE nucleotide exchange factor (35.6%) GrpE nucleotide exchange factor, coiled-coil (35.6%) GrpE nucleotide exchange factor, head (28.7%)" GSELAGMKYEQLIPWVNPGEGAFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004822 (14.3%)" isoleucyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) isoleucine-tRNA ligase activity (14.3%)" "IPR002300 (12.5%) IPR002301 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class Ia (12.5%) Isoleucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" AVAAGMNPMDLKR root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (20.1%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (12%) GO:1990220 (0%) GO:0005739 (0%)" "GO:0005524 (20.1%) GO:0140662 (20.1%) GO:0016853 (19.8%)" "protein refolding (20.1%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (12%) GroEL-GroES complex (0%) mitochondrion (0%)" "ATP binding (20.1%) ATP-dependent protein folding chaperone (20.1%) isomerase activity (19.8%)" "IPR001844 (18.5%) IPR002423 (18.5%) IPR027413 (18.5%)" "Chaperonin Cpn60/GroEL (18.5%) Chaperonin Cpn60/GroEL/TCP-1 family (18.5%) GroEL-like equatorial domain superfamily (18.5%)" ASIYNAMPLEGVK root 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20.1%) GO:0008615 (19%) GO:0006563 (0%)" "GO:0005737 (20.1%) GO:0005829 (0%)" "GO:0004648 (20.1%) GO:0030170 (20.1%) GO:0008483 (0.3%)" "L-serine biosynthetic process (20.1%) pyridoxine biosynthetic process (19%) L-serine metabolic process (0%)" "cytoplasm (20.1%) cytosol (0%)" "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20.1%) pyridoxal phosphate binding (20.1%) transaminase activity (0.3%)" "IPR022278 (17%) IPR000192 (16.9%) IPR015422 (16.9%)" "Phosphoserine aminotransferase (17%) Aminotransferase class V domain (16.9%) Pyridoxal phosphate-dependent transferase, small domain (16.9%)" KIEILVNFNPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.1%)" GO:0005829 (14.1%) "GO:0004347 (14.3%) GO:0097367 (14.3%) GO:0048029 (14.1%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.1%)" cytosol (14.1%) "glucose-6-phosphate isomerase activity (14.3%) carbohydrate derivative binding (14.3%) monosaccharide binding (14.1%)" "IPR001672 (20.2%) IPR046348 (20.2%) IPR018189 (19.9%)" "Phosphoglucose isomerase (PGI) (20.2%) SIS domain superfamily (20.2%) Phosphoglucose isomerase, conserved site (19.9%)" LTADGTYSNLSKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (32.8%) "GO:0022627 (32.8%) GO:0005840 (1.6%)" GO:0003735 (32.8%) translation (32.8%) "cytosolic small ribosomal subunit (32.8%) ribosome (1.6%)" structural constituent of ribosome (32.8%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" YAGQDIVSNASCTTNCLAPLAK root "1.2.1.- (85.8%) 1.2.1.12 (14.2%)" "With NAD(+) or NADP(+) as acceptor (85.8%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (14.2%)" "GO:0006006 (18.4%) GO:0072524 (8.5%) GO:0006096 (0.9%)" "GO:0005737 (0.8%) GO:0005829 (0%) GO:0005576 (0%)" "GO:0051287 (25.5%) GO:0050661 (18.4%) GO:0016620 (13.7%)" "glucose metabolic process (18.4%) pyridine-containing compound metabolic process (8.5%) glycolytic process (0.9%)" "cytoplasm (0.8%) cytosol (0%) extracellular region (0%)" "NAD binding (25.5%) NADP binding (18.4%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (13.7%)" "IPR020830 (17.8%) IPR020831 (17.8%) IPR020829 (17.8%)" "Glyceraldehyde 3-phosphate dehydrogenase, active site (17.8%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.8%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.8%)" RHGFGGVGQSTHGQHNR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (22.3%) "GO:0022625 (11.4%) GO:0005840 (10.9%) GO:1990904 (10.9%)" "GO:0003735 (22.3%) GO:0019843 (22.3%)" translation (22.3%) "cytosolic large ribosomal subunit (11.4%) ribosome (10.9%) ribonucleoprotein complex (10.9%)" "structural constituent of ribosome (22.3%) rRNA binding (22.3%)" "IPR000597 (25.2%) IPR009000 (25.2%) IPR019927 (25.2%)" "Large ribosomal subunit protein uL3 (25.2%) Translation protein, beta-barrel domain superfamily (25.2%) Large ribosomal subunit protein uL3, bacteria/organella (25.2%)" WLENIQDWNLSR Bacteroidota Bacteria Pseudomonadati Bacteroidota "6.1.1.5 (98.1%) 6.1.1.9 (1.9%)" "isoleucine--tRNA ligase (98.1%) valine--tRNA ligase (1.9%)" "GO:0006428 (14.2%) GO:0006438 (0.3%)" "GO:0005737 (14%) GO:0005829 (0.3%)" "GO:0005524 (14.5%) GO:0002161 (14.4%) GO:0004822 (14.2%)" "isoleucyl-tRNA aminoacylation (14.2%) valyl-tRNA aminoacylation (0.3%)" "cytoplasm (14%) cytosol (0.3%)" "ATP binding (14.5%) aminoacyl-tRNA deacylase activity (14.4%) isoleucine-tRNA ligase activity (14.2%)" "IPR002300 (12.6%) IPR014729 (12.6%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class Ia (12.6%) Rossmann-like alpha/beta/alpha sandwich fold (12.6%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" ATLVNPQGLHMRPAGLFASTMGK Collinsella Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella 2.7.11.- (100%) Protein-serine/threonine kinases (100%) GO:0009401 (44.4%) GO:0005737 (44.4%) GO:0016740 (11.1%) phosphoenolpyruvate-dependent sugar phosphotransferase system (44.4%) cytoplasm (44.4%) transferase activity (11.1%) "IPR000032 (33.3%) IPR035895 (33.3%) IPR050399 (33.3%)" "Phosphocarrier protein HPr-like (33.3%) HPr-like superfamily (33.3%) Phosphocarrier protein HPr (33.3%)" SVKDLDGKVVAVK root "GO:0006865 (24.4%) GO:0006868 (0%) GO:1903803 (0%)" "GO:0016020 (24.9%) GO:0030288 (24.6%) GO:0042597 (0.6%)" "GO:0015276 (24.9%) GO:0016597 (0.1%) GO:0016787 (0%)" "amino acid transport (24.4%) glutamine transport (0%) L-glutamine import across plasma membrane (0%)" "membrane (24.9%) outer membrane-bounded periplasmic space (24.6%) periplasmic space (0.6%)" "ligand-gated monoatomic ion channel activity (24.9%) amino acid binding (0.1%) hydrolase activity (0%)" "IPR001638 (25.5%) IPR001320 (24.9%) IPR044132 (24.8%)" "Solute-binding protein family 3/N-terminal domain of MltF (25.5%) Ionotropic glutamate receptor, C-terminal (24.9%) Glutamine-binding periplasmic protein GlnH, type 2 periplasmic binding protein fold (24.8%)" HKITESTTLIDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" GTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 1.1.1.8 (100%) glycerol-3-phosphate dehydrogenase (NAD(+)) (100%) "GO:0015031 (20.2%) GO:0051262 (20.2%) GO:0006457 (19.5%)" "GO:0005737 (19.5%) GO:0005829 (0%)" "GO:0051082 (20.2%) GO:0051287 (0%) GO:0070678 (0%)" "protein transport (20.2%) protein tetramerization (20.2%) protein folding (19.5%)" "cytoplasm (19.5%) cytosol (0%)" "unfolded protein binding (20.2%) NAD binding (0%) preprotein binding (0%)" "IPR003708 (49.9%) IPR035958 (49.9%) IPR011128 (0.1%)" "Bacterial protein export chaperone SecB (49.9%) SecB-like superfamily (49.9%) Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal (0.1%)" IHSEEDERPIGR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.6%) GO:0006352 (0%) GO:0006879 (0%)" "GO:0000428 (16.9%) GO:0005737 (16.4%) GO:0000345 (0%)" "GO:0046983 (16.6%) GO:0003899 (16.6%) GO:0003677 (16.4%)" "DNA-templated transcription (16.6%) DNA-templated transcription initiation (0%) intracellular iron ion homeostasis (0%)" "DNA-directed RNA polymerase complex (16.9%) cytoplasm (16.4%) cytosolic DNA-directed RNA polymerase complex (0%)" "protein dimerization activity (16.6%) DNA-directed RNA polymerase activity (16.6%) DNA binding (16.4%)" "IPR036603 (16.9%) IPR011263 (16.8%) IPR036643 (16.8%)" "RNA polymerase, RBP11-like subunit (16.9%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) DNA-directed RNA polymerase, insert domain superfamily (16.8%)" TQFAPGNPDVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" SFVMADIPGIIEGASEGK Bacteria Bacteria 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) GO:0042254 (16.5%) "GO:0005737 (16.3%) GO:0016020 (0.1%)" "GO:0003924 (17.3%) GO:0005525 (17.3%) GO:0000287 (17.2%)" ribosome biogenesis (16.5%) "cytoplasm (16.3%) membrane (0.1%)" "GTPase activity (17.3%) GTP binding (17.3%) magnesium ion binding (17.2%)" "IPR006073 (12.4%) IPR006074 (12.4%) IPR031167 (12.4%)" "GTP binding domain (12.4%) GTP1/OBG, conserved site (12.4%) OBG-type guanine nucleotide-binding (G) domain (12.4%)" EADPALYEDMKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (21.3%) GO:0009263 (6.6%)" "GO:0004748 (23.8%) GO:0031419 (23.8%) GO:0000166 (17.2%)" "DNA biosynthetic process (21.3%) deoxyribonucleotide biosynthetic process (6.6%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (23.8%) cobalamin binding (23.8%) nucleotide binding (17.2%)" "IPR000788 (30.6%) IPR013344 (30.6%) IPR050862 (30.6%)" "Ribonucleotide reductase large subunit, C-terminal (30.6%) Ribonucleotide reductase, adenosylcobalamin-dependent (30.6%) Ribonucleoside diphosphate reductase class-2 (30.6%)" NESIDLTEIIRR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR004216 (11.1%) IPR005763 (11.1%) IPR009015 (11.1%)" "L-fucose/L-arabinose isomerase, C-terminal (11.1%) L-fucose isomerase (11.1%) L-fucose isomerase, N-terminal/central domain superfamily (11.1%)" TKPGGFEGIGVDGLAWLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.5 (100%) chorismate mutase (100%) GO:0046417 (47.9%) "GO:0004106 (47.9%) GO:0003849 (4.1%)" chorismate metabolic process (47.9%) "chorismate mutase activity (47.9%) 3-deoxy-7-phosphoheptulonate synthase activity (4.1%)" "IPR002701 (16.7%) IPR006218 (16.7%) IPR013785 (16.7%)" "Chorismate mutase II, prokaryotic-type (16.7%) DAHP synthetase I/KDSA (16.7%) Aldolase-type TIM barrel (16.7%)" ELRETTGAGMMDCKK Bacteria Bacteria GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" LRGWQVPAFTLGGEATDIVVMR root 4.1.1.15 (100%) glutamate decarboxylase (100%) "GO:0006538 (21.1%) GO:0051454 (15%)" "GO:0005829 (21.1%) GO:0016020 (0.1%)" "GO:0004351 (21.1%) GO:0030170 (21.1%) GO:0016829 (0.4%)" "L-glutamate catabolic process (21.1%) intracellular pH elevation (15%)" "cytosol (21.1%) membrane (0.1%)" "glutamate decarboxylase activity (21.1%) pyridoxal phosphate binding (21.1%) lyase activity (0.4%)" "IPR015424 (21.5%) IPR010107 (21.1%) IPR002129 (19.9%)" "Pyridoxal phosphate-dependent transferase (21.5%) Glutamate decarboxylase (21.1%) Pyridoxal phosphate-dependent decarboxylase (19.9%)" VQAEVTAPKVER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0005737 (33.3%) "GO:0016407 (33.3%) GO:0031405 (33.3%)" cytoplasm (33.3%) "acetyltransferase activity (33.3%) lipoic acid binding (33.3%)" "IPR000089 (12.5%) IPR001078 (12.5%) IPR003016 (12.5%)" "Biotin/lipoyl attachment (12.5%) 2-oxoacid dehydrogenase acyltransferase, catalytic domain (12.5%) 2-oxo acid dehydrogenase, lipoyl-binding site (12.5%)" ALVAADITVNK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.4%) GO:0035999 (15.4%) GO:0032259 (11.2%)" GO:0005829 (15.4%) "GO:0004372 (15.4%) GO:0030170 (15.4%) GO:0008168 (11.2%)" "glycine biosynthetic process from serine (15.4%) tetrahydrofolate interconversion (15.4%) methylation (11.2%)" cytosol (15.4%) "glycine hydroxymethyltransferase activity (15.4%) pyridoxal phosphate binding (15.4%) methyltransferase activity (11.2%)" "IPR001085 (14.4%) IPR019798 (14.4%) IPR039429 (14.4%)" "Serine hydroxymethyltransferase (14.4%) Serine hydroxymethyltransferase, pyridoxal phosphate binding site (14.4%) Serine hydroxymethyltransferase-like domain (14.4%)" SGDCLLCEIQNDATLGSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (3.2%) "GO:0000287 (19.4%) GO:0004743 (19.4%) GO:0005524 (19.4%)" response to stress (3.2%) "magnesium ion binding (19.4%) pyruvate kinase activity (19.4%) ATP binding (19.4%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" VYDVVISDGSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20.1%) GO:0005829 (20.1%) "GO:0004335 (20.1%) GO:0005524 (20.1%) GO:0046872 (18.2%)" galactose metabolic process (20.1%) cytosol (20.1%) "galactokinase activity (20.1%) ATP binding (20.1%) metal ion binding (18.2%)" "IPR013750 (10.1%) IPR036554 (10.1%) IPR000705 (9.9%)" "GHMP kinase, C-terminal domain (10.1%) GHMP kinase, C-terminal domain superfamily (10.1%) Galactokinase (9.9%)" TAPVMIYAGHNIGEDYLYELTEFLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" TMQVGALHFEGLELMNAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" ILFENLTPLHANSR root "3.6.4.- (99.9%) 3.6.1.15 (0.1%)" "Acting on ATP; involved in cellular and subcellular movement (99.9%) nucleoside-triphosphate phosphatase (0.1%)" GO:0006353 (14.3%) "GO:0005829 (14.1%) GO:0016020 (0%)" "GO:0003723 (14.3%) GO:0005524 (14.3%) GO:0008186 (14.3%)" DNA-templated transcription termination (14.3%) "cytosol (14.1%) membrane (0%)" "RNA binding (14.3%) ATP binding (14.3%) ATP-dependent activity, acting on RNA (14.3%)" "IPR004665 (10.1%) IPR011113 (10.1%) IPR027417 (10.1%)" "Transcription termination factor Rho (10.1%) Rho termination factor, RNA-binding domain (10.1%) P-loop containing nucleoside triphosphate hydrolase (10.1%)" YLEGAEYTAALVEKDGNFITGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.-.- (100%) Glycosylases (100%) GO:0006508 (10%) GO:0005737 (75%) "GO:0008233 (10%) GO:0016798 (5%)" proteolysis (10%) cytoplasm (75%) "peptidase activity (10%) hydrolase activity, acting on glycosyl bonds (5%)" "IPR002818 (25%) IPR006287 (25%) IPR029062 (25%)" "DJ-1/PfpI (25%) Protein/nucleic acid deglycase DJ-1 (25%) Class I glutamine amidotransferase-like (25%)" VLVLLTDMTSYADALAIVSNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (31.7%) GO:1902600 (31.7%) GO:0006811 (1.7%)" "GO:0005524 (33.4%) GO:0016787 (1.4%)" "ATP metabolic process (31.7%) proton transmembrane transport (31.7%) monoatomic ion transport (1.7%)" "ATP binding (33.4%) hydrolase activity (1.4%)" "IPR000194 (20.3%) IPR022879 (20.3%) IPR027417 (20.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.3%) V-type ATP synthase regulatory subunit B/beta (20.3%) P-loop containing nucleoside triphosphate hydrolase (20.3%)" FQNLMDDLFGETGKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003593 (25%) IPR003959 (25%) IPR027417 (25%)" "AAA+ ATPase domain (25%) ATPase, AAA-type, core (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" AAEGNNFGTVLIPEGLVEFIPAMK root "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" FKAASTVINKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR007139 (100%) Protein of unknown function DUF349 (100%) LIGTYAAHTPKDADLFFLSLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" VDAYIIPSSDPHLSEYPADR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.9 (100%) Xaa-Pro dipeptidase (100%) GO:0005737 (31.6%) "GO:0046872 (31.6%) GO:0070006 (31.6%) GO:0102009 (3.5%)" cytoplasm (31.6%) "metal ion binding (31.6%) metalloaminopeptidase activity (31.6%) proline dipeptidase activity (3.5%)" "IPR000587 (14.3%) IPR000994 (14.3%) IPR029149 (14.3%)" "Creatinase, N-terminal (14.3%) Peptidase M24 (14.3%) Creatinase/Aminopeptidase P/Spt16, N-terminal (14.3%)" YAHVTFFFNGGR root "5.4.2.12 (99.9%) 5.4.2.1 (0.1%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (99.9%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.1%)" "GO:0006007 (19.7%) GO:0006096 (19.7%) GO:0019287 (0.3%)" "GO:0005829 (16.6%) GO:0005737 (3.1%) GO:0005839 (0%)" "GO:0004619 (19.7%) GO:0030145 (19.7%) GO:0004496 (0.3%)" "glucose catabolic process (19.7%) glycolytic process (19.7%) isopentenyl diphosphate biosynthetic process, mevalonate pathway (0.3%)" "cytosol (16.6%) cytoplasm (3.1%) proteasome core complex (0%)" "phosphoglycerate mutase activity (19.7%) manganese ion binding (19.7%) mevalonate kinase activity (0.3%)" "IPR005995 (19.6%) IPR006124 (19.6%) IPR017850 (19.6%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (19.6%) Metalloenzyme (19.6%) Alkaline-phosphatase-like, core domain superfamily (19.6%)" GYGMGDAAEGK Pseudomonadati Bacteria Pseudomonadati 1.2.4.1 (100%) pyruvate dehydrogenase (acetyl-transferring) (100%) GO:0042867 (0.1%) "GO:0005829 (0.1%) GO:0016020 (0.1%) GO:0045254 (0.1%)" "GO:0000287 (48.4%) GO:0004739 (37.4%) GO:0016491 (12.5%)" pyruvate catabolic process (0.1%) "cytosol (0.1%) membrane (0.1%) pyruvate dehydrogenase complex (0.1%)" "magnesium ion binding (48.4%) pyruvate dehydrogenase (acetyl-transferring) activity (37.4%) oxidoreductase activity (12.5%)" "IPR029061 (12.7%) IPR051157 (12.7%) IPR041621 (12.5%)" "Thiamin diphosphate-binding fold (12.7%) Pyruvate Dehydrogenase/Transketolase (12.7%) Pyruvate dehydrogenase E1 component, middle domain (12.5%)" ALRDEVIAMGVLPAISEWHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (38.9%) "GO:0016615 (22.2%) GO:0016616 (22.2%) GO:0030060 (16.7%)" malate metabolic process (38.9%) "malate dehydrogenase activity (22.2%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (22.2%) L-malate dehydrogenase (NAD+) activity (16.7%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" AQFTDAAIKNFGSGWTWLVK Bacteria Bacteria 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0000303 (0.1%) GO:0006801 (0.1%) GO:0019430 (0.1%)" "GO:0005737 (32.4%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0004784 (33.5%) GO:0046914 (32.7%) GO:0046872 (0.7%)" "response to superoxide (0.1%) superoxide metabolic process (0.1%) removal of superoxide radicals (0.1%)" "cytoplasm (32.4%) cytosol (0.1%) membrane (0.1%)" "superoxide dismutase activity (33.5%) transition metal ion binding (32.7%) metal ion binding (0.7%)" "IPR001189 (16.7%) IPR019832 (16.7%) IPR036314 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal domain superfamily (16.7%)" GYEPNSFGEWKDSPEKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" GO:0005737 (16.7%) "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16.7%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" cytoplasm (16.7%) "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16.7%)" "IPR002226 (12.5%) IPR010582 (12.5%) IPR011614 (12.5%)" "Catalase haem-binding site (12.5%) Catalase immune-responsive domain (12.5%) Catalase core domain (12.5%)" ELKPDQKDLWIQGLYR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" MQPVDLTQAAENSVHAVVHIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.4.21.107 (57.1%) 3.4.21.- (42.9%)" "peptidase Do (57.1%) Serine endopeptidases (42.9%)" GO:0006508 (47.9%) "GO:0030313 (2.1%) GO:0042597 (2.1%)" GO:0004252 (47.9%) proteolysis (47.9%) "cell envelope (2.1%) periplasmic space (2.1%)" serine-type endopeptidase activity (47.9%) "IPR001478 (17%) IPR001940 (17%) IPR009003 (17%)" "PDZ domain (17%) Peptidase S1C (17%) Peptidase S1, PA clan (17%)" IAEQDFIPDELIIHSEFKNQGE Escherichia coli Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli "2.5.1.56 (50%) 2.5.1.57 (33.3%) 1.2.4.1 (16.7%)" "N-acetylneuraminate synthase (50%) N-acylneuraminate-9-phosphate synthase (33.3%) pyruvate dehydrogenase (acetyl-transferring) (16.7%)" "GO:0016051 (29.4%) GO:0070085 (29.4%)" "GO:0047444 (29.4%) GO:0050462 (8.8%) GO:0004739 (2.9%)" "carbohydrate biosynthetic process (29.4%) obsolete glycosylation (29.4%)" "N-acylneuraminate-9-phosphate synthase activity (29.4%) N-acetylneuraminate synthase activity (8.8%) pyruvate dehydrogenase (acetyl-transferring) activity (2.9%)" "IPR006190 (14.5%) IPR013132 (14.5%) IPR013785 (14.5%)" "Antifreeze-like/N-acetylneuraminic acid synthase, SAF domain (14.5%) PseI/NeuA/B-like (14.5%) Aldolase-type TIM barrel (14.5%)" LGEPVFDVQECQIR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.8%) GO:0006352 (0%) GO:0006412 (0%)" "GO:0000428 (20.1%) GO:0005829 (0.1%) GO:0000345 (0%)" "GO:0003677 (19.8%) GO:0003899 (19.8%) GO:0032549 (19.6%)" "DNA-templated transcription (19.8%) DNA-templated transcription initiation (0%) translation (0%)" "DNA-directed RNA polymerase complex (20.1%) cytosol (0.1%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA binding (19.8%) DNA-directed RNA polymerase activity (19.8%) ribonucleoside binding (19.6%)" "IPR007644 (8%) IPR015712 (7.9%) IPR007642 (7.9%)" "RNA polymerase, beta subunit, protrusion (8%) DNA-directed RNA polymerase, subunit 2 (7.9%) RNA polymerase Rpb2, domain 2 (7.9%)" INQEFKNVVVSHK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.6%) "GO:0022627 (23.7%) GO:0005840 (1.1%) GO:1990904 (0.9%)" "GO:0003729 (24.6%) GO:0003735 (24.6%) GO:0004654 (0.2%)" translation (24.6%) "cytosolic small ribosomal subunit (23.7%) ribosome (1.1%) ribonucleoprotein complex (0.9%)" "mRNA binding (24.6%) structural constituent of ribosome (24.6%) polyribonucleotide nucleotidyltransferase activity (0.2%)" "IPR003029 (24.9%) IPR012340 (24.9%) IPR035104 (24.9%)" "S1 domain (24.9%) Nucleic acid-binding, OB-fold (24.9%) Ribosomal protein S1-like (24.9%)" FSAASQPAAPVTK root "GO:0006355 (24.2%) GO:0032297 (23.5%) GO:0005975 (0.3%)" "GO:0005737 (23.2%) GO:0005829 (0.7%) GO:0032991 (0.3%)" "GO:0043565 (23.5%) GO:0000287 (0.3%) GO:0003677 (0.3%)" "regulation of DNA-templated transcription (24.2%) negative regulation of DNA-templated DNA replication initiation (23.5%) carbohydrate metabolic process (0.3%)" "cytoplasm (23.2%) cytosol (0.7%) protein-containing complex (0.3%)" "sequence-specific DNA binding (23.5%) magnesium ion binding (0.3%) DNA binding (0.3%)" "IPR010985 (16.4%) IPR013321 (16.4%) IPR033761 (16.4%)" "Ribbon-helix-helix (16.4%) Arc-type ribbon-helix-helix (16.4%) Negative modulator of initiation of replication SeqA, N-terminal (16.4%)" QIDSDNIASYPADQQAQLIQAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000297 (25%) IPR027304 (25%) IPR046357 (25%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (25%) Trigger factor/SurA domain superfamily (25%) Peptidyl-prolyl cis-trans isomerase domain superfamily (25%)" NVHAILAEAGYSINDVVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.4.- (100%) In cyclic amidines (100%) GO:0005829 (50%) GO:0019239 (50%) cytosol (50%) deaminase activity (50%) "IPR006056 (26.5%) IPR006175 (26.5%) IPR035959 (26.5%)" "RidA family (26.5%) YjgF/YER057c/UK114 family (26.5%) RutC-like superfamily (26.5%)" AVAFMMDDALLAGER root "GO:0006865 (33.2%) GO:0015813 (0%) GO:0070778 (0%)" "GO:0005576 (33.2%) GO:0030288 (33.2%) GO:0016020 (0.1%)" "GO:0015276 (0%) GO:0016595 (0%) GO:0070335 (0%)" "amino acid transport (33.2%) L-glutamate transmembrane transport (0%) L-aspartate transmembrane transport (0%)" "extracellular region (33.2%) outer membrane-bounded periplasmic space (33.2%) membrane (0.1%)" "ligand-gated monoatomic ion channel activity (0%) glutamate binding (0%) aspartate binding (0%)" "IPR051455 (50.1%) IPR001638 (49.8%) IPR001320 (0%)" "Bacterial solute-binding protein 3 (50.1%) Solute-binding protein family 3/N-terminal domain of MltF (49.8%) Ionotropic glutamate receptor, C-terminal (0%)" AAEAAYTGSQAPVEEMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.6.1.- (97%) 2.6.1.1 (3%)" "Transaminases (97%) aspartate transaminase (3%)" GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" NEASEDSVWWTSDEYKNDNKPCSEAAWADLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.4%) GO:0005829 (18.4%) "GO:0004612 (18.4%) GO:0005524 (18.4%) GO:0046872 (18.4%)" gluconeogenesis (18.4%) cytosol (18.4%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.4%) ATP binding (18.4%) metal ion binding (18.4%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" QYEQLLKGEEPTVEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000534 (20%) IPR005986 (20%) IPR012080 (20%)" "Semialdehyde dehydrogenase, NAD-binding (20%) Aspartate-semialdehyde dehydrogenase, beta-type (20%) Aspartate-semialdehyde dehydrogenase (20%)" GTLDTAGVNGR Pseudomonadati Bacteria Pseudomonadati GO:0006412 (20.4%) GO:0015935 (20.4%) "GO:0003735 (20.4%) GO:0019843 (20.4%) GO:0000049 (18.6%)" translation (20.4%) small ribosomal subunit (20.4%) "structural constituent of ribosome (20.4%) rRNA binding (20.4%) tRNA binding (18.6%)" "IPR005679 (33.3%) IPR006032 (33.3%) IPR012340 (33.3%)" "Ribosomal protein uS12, bacteria (33.3%) Small ribosomal subunit protein uS12 (33.3%) Nucleic acid-binding, OB-fold (33.3%)" MSYATSDENIVEAIKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.6.1.- (97.1%) 2.6.1.1 (2.9%)" "Transaminases (97.1%) aspartate transaminase (2.9%)" GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR015422 (17%) IPR015424 (17%) IPR004838 (16.5%)" "Pyridoxal phosphate-dependent transferase, small domain (17%) Pyridoxal phosphate-dependent transferase (17%) Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.5%)" TGVEPHIGDVQYFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.1%) IPR000795 (7.1%) IPR005225 (7.1%)" "Elongation factor EFG, domain V-like (7.1%) Translational (tr)-type GTP-binding domain (7.1%) Small GTP-binding domain (7.1%)" NFYNLEHLWADAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0017148 (20%) GO:0042256 (20%) GO:0090071 (20%)" GO:0005737 (20%) GO:0043023 (20%) "negative regulation of translation (20%) cytosolic ribosome assembly (20%) negative regulation of ribosome biogenesis (20%)" cytoplasm (20%) ribosomal large subunit binding (20%) "IPR043519 (50.8%) IPR004394 (49.2%)" "Nucleotidyltransferase superfamily (50.8%) Protein Iojap/ribosomal silencing factor RsfS (49.2%)" AVTLYLGAVAATVR root "GO:0006412 (32%) GO:0000028 (0.6%) GO:0002181 (0.3%)" "GO:0022627 (31.7%) GO:0005840 (2.3%) GO:0005737 (0.3%)" "GO:0003735 (32.3%) GO:0008270 (0.3%)" "translation (32%) ribosomal small subunit assembly (0.6%) cytoplasmic translation (0.3%)" "cytosolic small ribosomal subunit (31.7%) ribosome (2.3%) cytoplasm (0.3%)" "structural constituent of ribosome (32.3%) zinc ion binding (0.3%)" "IPR023591 (25.5%) IPR001865 (25.3%) IPR005706 (25.1%)" "Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.5%) Small ribosomal subunit protein uS2 (25.3%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.1%)" VSQLALLPQGK root "1.3.5.1 (42.9%) 1.3.99.1 (32.1%) 1.3.5.4 (21.4%)" "succinate dehydrogenase (42.9%) Deleted entry (32.1%) Transferred entry: 1.3.5.1 (21.4%)" "GO:0022904 (22.7%) GO:0009060 (20.4%) GO:0006099 (2.3%)" "GO:0009055 (22.5%) GO:0051537 (22.5%) GO:0016491 (3.6%)" "respiratory electron transport chain (22.7%) aerobic respiration (20.4%) tricarboxylic acid cycle (2.3%)" "electron transfer activity (22.5%) 2 iron, 2 sulfur cluster binding (22.5%) oxidoreductase activity (3.6%)" "IPR009051 (13.8%) IPR017896 (13.8%) IPR012675 (13.6%)" "Alpha-helical ferredoxin (13.8%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (13.8%) Beta-grasp domain superfamily (13.6%)" DDLIFDIIEKEHQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (14.8%) GO:0035999 (14.6%) GO:0032259 (12.9%)" "GO:0005829 (14.8%) GO:0005737 (0.1%)" "GO:0004372 (14.8%) GO:0030170 (14.8%) GO:0008168 (12.9%)" "glycine biosynthetic process from serine (14.8%) tetrahydrofolate interconversion (14.6%) methylation (12.9%)" "cytosol (14.8%) cytoplasm (0.1%)" "glycine hydroxymethyltransferase activity (14.8%) pyridoxal phosphate binding (14.8%) methyltransferase activity (12.9%)" "IPR015422 (14.5%) IPR015424 (14.5%) IPR039429 (14.4%)" "Pyridoxal phosphate-dependent transferase, small domain (14.5%) Pyridoxal phosphate-dependent transferase (14.5%) Serine hydroxymethyltransferase-like domain (14.4%)" AGEEFTIDVTFPEEYHAENLKGK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0051301 (12.5%) GO:0015031 (12.5%) GO:0043335 (12.1%)" "GO:0005737 (12.5%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003755 (12.6%) GO:0043022 (12.1%) GO:0044183 (12.1%)" "cell division (12.5%) protein transport (12.5%) protein unfolding (12.1%)" "cytoplasm (12.5%) cytosol (0%) membrane (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.6%) ribosome binding (12.1%) protein folding chaperone (12.1%)" "IPR001179 (12.7%) IPR037041 (12.6%) IPR046357 (12.6%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (12.7%) Trigger factor, C-terminal domain superfamily (12.6%) Peptidyl-prolyl cis-trans isomerase domain superfamily (12.6%)" MEYDIAIIGGGPAGYTAAER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (26.5%) GO:0005737 (20.4%) "GO:0004148 (26.5%) GO:0050660 (26.5%)" 2-oxoglutarate metabolic process (26.5%) cytoplasm (20.4%) "dihydrolipoyl dehydrogenase (NADH) activity (26.5%) flavin adenine dinucleotide binding (26.5%)" "IPR004099 (12.9%) IPR006258 (12.9%) IPR012999 (12.9%)" "Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.9%) Dihydrolipoamide dehydrogenase (12.9%) Pyridine nucleotide-disulphide oxidoreductase, class I, active site (12.9%)" HVSELLGVEVQFANDCMGEEAAVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" SANCLKAEAIHYIGDLVQR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.6%) GO:0006352 (0%) GO:0006879 (0%)" "GO:0000428 (16.8%) GO:0005737 (16.4%) GO:0000345 (0%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.6%)" "DNA-templated transcription (16.6%) DNA-templated transcription initiation (0%) intracellular iron ion homeostasis (0%)" "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.4%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.6%)" "IPR011260 (16.8%) IPR036603 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.8%) RNA polymerase, RBP11-like subunit (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" VYLAEHDVVTELTPTDR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.8%) GO:0006516 (19.8%)" GO:0005829 (19.8%) "GO:0000224 (19.8%) GO:0030246 (19.8%) GO:0016798 (1.2%)" "carbohydrate metabolic process (19.8%) glycoprotein catabolic process (19.8%)" cytosol (19.8%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.8%) carbohydrate binding (19.8%) hydrolase activity, acting on glycosyl bonds (1.2%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" VIHTIKDLQAELSVLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.2.1 (100%) pantoate--beta-alanine ligase (AMP-forming) (100%) GO:0015940 (25%) GO:0005829 (25%) "GO:0004592 (25%) GO:0005524 (25%)" pantothenate biosynthetic process (25%) cytosol (25%) "pantoate-beta-alanine ligase activity (25%) ATP binding (25%)" "IPR003721 (33.3%) IPR014729 (33.3%) IPR042176 (33.3%)" "Pantoate-beta-alanine ligase (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (33.3%) Pantoate-beta-alanine ligase, C-terminal domain (33.3%)" AMAEVGVAPHNMAVISGIGCSSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.-.- (33.3%) 1.2.7.11 (33.3%) 1.2.7.3 (33.3%)" "Acting on the aldehyde or oxo group of donors (33.3%) 2-oxoacid oxidoreductase (ferredoxin) (33.3%) 2-oxoglutarate synthase (33.3%)" GO:0044281 (33.3%) "GO:0016625 (33.3%) GO:0030976 (33.3%)" small molecule metabolic process (33.3%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (33.3%) thiamine pyrophosphate binding (33.3%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" VLGTPVQAIIDTEDRELFVDKLNEIDVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (13.2%) GO:0006526 (13.2%) GO:0006541 (13.2%)" GO:0005737 (13.2%) "GO:0004088 (13.2%) GO:0005524 (13.2%) GO:0046872 (13.2%)" "pyrimidine nucleotide biosynthetic process (13.2%) L-arginine biosynthetic process (13.2%) glutamine metabolic process (13.2%)" cytoplasm (13.2%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.2%) ATP binding (13.2%) metal ion binding (13.2%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" GLEFSELLDEVEAIVYSGTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.6.2.4 (85%) 3.6.1.- (10%) 3.6.4.12 (5%)" "DNA 3'-5' helicase (85%) In phosphorus-containing anhydrides (10%) DNA helicase (5%)" "GO:0006260 (8.3%) GO:0006281 (8.3%) GO:0006310 (8.3%)" "GO:0005737 (8.3%) GO:0030894 (8.3%) GO:0043590 (8.3%)" "GO:0003677 (8.3%) GO:0005524 (8.3%) GO:0009378 (8.3%)" "DNA replication (8.3%) DNA repair (8.3%) DNA recombination (8.3%)" "cytoplasm (8.3%) replisome (8.3%) bacterial nucleoid (8.3%)" "DNA binding (8.3%) ATP binding (8.3%) four-way junction helicase activity (8.3%)" "IPR001650 (7.1%) IPR002121 (7.1%) IPR004589 (7.1%)" "Helicase, C-terminal domain-like (7.1%) HRDC domain (7.1%) DNA helicase, ATP-dependent, RecQ type (7.1%)" VADINFENEDVNTLMQIQAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis VLAMNESGKK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0000028 (16.6%) GO:0006412 (16.6%)" "GO:0005737 (16.6%) GO:0015935 (16.6%) GO:0005840 (0.1%)" "GO:0003735 (16.6%) GO:0019843 (16.6%)" "ribosomal small subunit assembly (16.6%) translation (16.6%)" "cytoplasm (16.6%) small ribosomal subunit (16.6%) ribosome (0.1%)" "structural constituent of ribosome (16.6%) rRNA binding (16.6%)" "IPR002222 (25.1%) IPR005732 (25.1%) IPR023575 (25.1%)" "Small ribosomal subunit protein uS19 (25.1%) Small ribosomal subunit protein uS19, bacteria (25.1%) Small ribosomal subunit protein uS19, superfamily (25.1%)" FAALAGAIDEEKVVLESLGSIKR root 4.2.1.24 (100%) porphobilinogen synthase (100%) "GO:0006782 (17.6%) GO:0006783 (7.3%)" GO:0005829 (24.7%) "GO:0004655 (24.7%) GO:0008270 (24.7%) GO:0016829 (0.7%)" "protoporphyrinogen IX biosynthetic process (17.6%) heme biosynthetic process (7.3%)" cytosol (24.7%) "porphobilinogen synthase activity (24.7%) zinc ion binding (24.7%) lyase activity (0.7%)" "IPR001731 (33.7%) IPR013785 (33.7%) IPR030656 (32.5%)" "Delta-aminolevulinic acid dehydratase (33.7%) Aldolase-type TIM barrel (33.7%) Delta-aminolevulinic acid dehydratase, active site (32.5%)" ITDLMFAGTDEDLRQTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0006633 (33%) GO:0005829 (33%) "GO:0004314 (33%) GO:0016740 (0.9%)" fatty acid biosynthetic process (33%) cytosol (33%) "[acyl-carrier-protein] S-malonyltransferase activity (33%) transferase activity (0.9%)" "IPR001227 (14.4%) IPR014043 (14.4%) IPR016035 (14.4%)" "Acyl transferase domain superfamily (14.4%) Acyl transferase domain (14.4%) Acyl transferase/acyl hydrolase/lysophospholipase (14.4%)" VIVHVGSTCVK Bacteroidota Bacteria Pseudomonadati Bacteroidota 4.1.3.3 (100%) N-acetylneuraminate lyase (100%) GO:0005737 (50%) "GO:0016829 (43.4%) GO:0008747 (6.6%)" cytoplasm (50%) "lyase activity (43.4%) N-acetylneuraminate lyase activity (6.6%)" "IPR002220 (50%) IPR013785 (50%)" "DapA-like (50%) Aldolase-type TIM barrel (50%)" TPPVAIQLLEIAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (16.4%) IPR006519 (16.4%) IPR020783 (16.4%)" "Ribosomal protein uL11 (16.4%) Large ribosomal subunit protein uL11, bacteria (16.4%) Large ribosomal subunit protein uL11, C-terminal (16.4%)" KGDAKTEAFGSNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.1.1.15 (100%) glutamate decarboxylase (100%) GO:0006538 (24.6%) GO:0005829 (24.6%) "GO:0004351 (24.6%) GO:0030170 (24.6%) GO:0016829 (1.6%)" L-glutamate catabolic process (24.6%) cytosol (24.6%) "glutamate decarboxylase activity (24.6%) pyridoxal phosphate binding (24.6%) lyase activity (1.6%)" "IPR002129 (25%) IPR010107 (25%) IPR015421 (25%)" "Pyridoxal phosphate-dependent decarboxylase (25%) Glutamate decarboxylase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%)" VGLYTSPHLVDFR root "6.3.2.17 (51.5%) 6.3.2.12 (47.1%) 6.3.2.- (1.3%)" "tetrahydrofolate synthase (51.5%) dihydrofolate synthase (47.1%) Acid--amino-acid ligases (peptide synthases) (1.3%)" GO:0046656 (15.4%) "GO:0005737 (16.9%) GO:0016020 (0.1%)" "GO:0004326 (16.9%) GO:0005524 (16.9%) GO:0008841 (16.9%)" folic acid biosynthetic process (15.4%) "cytoplasm (16.9%) membrane (0.1%)" "tetrahydrofolylpolyglutamate synthase activity (16.9%) ATP binding (16.9%) dihydrofolate synthase activity (16.9%)" "IPR001645 (16.9%) IPR036565 (16.9%) IPR013221 (16.8%)" "Folylpolyglutamate synthetase (16.9%) Mur-like, catalytic domain superfamily (16.9%) Mur ligase, central (16.8%)" MISPLAYIHPEAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.129 (100%) acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (100%) "GO:0009245 (32.3%) GO:0008610 (1.3%)" GO:0016020 (32.3%) "GO:0008780 (33.5%) GO:0016746 (0.3%) GO:0046872 (0.3%)" "lipid A biosynthetic process (32.3%) lipid biosynthetic process (1.3%)" membrane (32.3%) "acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity (33.5%) acyltransferase activity (0.3%) metal ion binding (0.3%)" "IPR001451 (20.2%) IPR011004 (20.2%) IPR010137 (20%)" "Hexapeptide repeat (20.2%) Trimeric LpxA-like superfamily (20.2%) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (20%)" KAFISALEALSNELKTE Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GVVMNPVDHPMGGGEGR root GO:0002181 (19.9%) "GO:0015934 (19.9%) GO:0005840 (0.1%) GO:1990904 (0.1%)" "GO:0003735 (20%) GO:0016740 (19.9%) GO:0019843 (18.6%)" cytoplasmic translation (19.9%) "large ribosomal subunit (19.9%) ribosome (0.1%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (20%) transferase activity (19.9%) rRNA binding (18.6%)" "IPR002171 (11.1%) IPR008991 (11.1%) IPR014726 (11.1%)" "Large ribosomal subunit protein uL2 (11.1%) Translation protein SH3-like domain superfamily (11.1%) Large ribosomal subunit protein uL2, domain 3 (11.1%)" AYHAGMDSATR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "5.6.2.4 (92.7%) 3.6.4.12 (5.5%) 3.6.1.- (1.8%)" "DNA 3'-5' helicase (92.7%) DNA helicase (5.5%) In phosphorus-containing anhydrides (1.8%)" "GO:0006260 (8.4%) GO:0006281 (8.4%) GO:0006310 (8.4%)" "GO:0005737 (8.4%) GO:0030894 (8.4%) GO:0043590 (8.4%)" "GO:0009378 (8.4%) GO:0016787 (8.4%) GO:0043138 (8.4%)" "DNA replication (8.4%) DNA repair (8.4%) DNA recombination (8.4%)" "cytoplasm (8.4%) replisome (8.4%) bacterial nucleoid (8.4%)" "four-way junction helicase activity (8.4%) hydrolase activity (8.4%) 3'-5' DNA helicase activity (8.4%)" "IPR001650 (7.2%) IPR002121 (7.2%) IPR010997 (7.2%)" "Helicase, C-terminal domain-like (7.2%) HRDC domain (7.2%) HRDC-like superfamily (7.2%)" DIIPTSNSVFNSAVVPFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "2.4.1.319 (50%) 2.4.1.320 (50%)" "beta-1,4-mannooligosaccharide phosphorylase (50%) 1,4-beta-mannosyl-N-acetylglucosamine phosphorylase (50%)" "GO:0016757 (66.7%) GO:0016798 (29.2%) GO:0016787 (4.2%)" "glycosyltransferase activity (66.7%) hydrolase activity, acting on glycosyl bonds (29.2%) hydrolase activity (4.2%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" IGGIPVVDDNRYLVGIVTNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" KYESNAFISPER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0050821 (33.9%) GO:0005829 (32.1%) GO:0051082 (33.9%) protein stabilization (33.9%) cytosol (32.1%) unfolded protein binding (33.9%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" AVLGANPCPVVIPIGAEENFKGLVDLIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" GYSAELYPDGEAGFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006355 (19.8%) GO:0000160 (1.2%)" "GO:0005829 (19.8%) GO:0032993 (19.8%)" "GO:0000156 (19.8%) GO:0000976 (19.8%)" "regulation of DNA-templated transcription (19.8%) phosphorelay signal transduction system (1.2%)" "cytosol (19.8%) protein-DNA complex (19.8%)" "phosphorelay response regulator activity (19.8%) transcription cis-regulatory region binding (19.8%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" AKIEPNEDIHVNDLIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (17%) GO:0005829 (17%) "GO:0004818 (17%) GO:0005524 (17%) GO:0000049 (15.9%)" glutamyl-tRNA aminoacylation (17%) cytosol (17%) "glutamate-tRNA ligase activity (17%) ATP binding (17%) tRNA binding (15.9%)" "IPR014729 (10.4%) IPR020058 (10.4%) IPR049940 (10.4%)" "Rossmann-like alpha/beta/alpha sandwich fold (10.4%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (10.4%) Glutamyl-Q tRNA(Asp) synthetase/Glutamate--tRNA ligase (10.4%)" AMMAAEESLDDLRGMLNDGTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0000917 (14.3%) GO:0043093 (14.3%) GO:0051258 (14.3%)" "GO:0005737 (14.3%) GO:0032153 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%)" "division septum assembly (14.3%) FtsZ-dependent cytokinesis (14.3%) protein polymerization (14.3%)" "cytoplasm (14.3%) cell division site (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" DKGDLSENAEYDAAKEAQGLLEMK root "GO:0006354 (20.1%) GO:0032784 (20.1%)" "GO:0003677 (20.1%) GO:0070063 (20.1%) GO:0003746 (19.6%)" "DNA-templated transcription elongation (20.1%) regulation of DNA-templated transcription elongation (20.1%)" "DNA binding (20.1%) RNA polymerase binding (20.1%) translation elongation factor activity (19.6%)" "IPR001437 (12.6%) IPR022691 (12.6%) IPR023459 (12.6%)" "Transcription elongation factor, GreA/GreB, C-terminal (12.6%) Transcription elongation factor, GreA/GreB, N-terminal (12.6%) Transcription elongation factor GreA/GreB family (12.6%)" GVSGAGPITHFDASK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.4%) IPR014030 (14.4%) IPR014031 (14.4%)" "Beta-ketoacyl synthase (14.4%) Beta-ketoacyl synthase-like, N-terminal (14.4%) Beta-ketoacyl synthase, C-terminal (14.4%)" EIPAEALYGVQTLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.3%) IPR008948 (14.3%) IPR018951 (14.3%)" "Fumarate lyase family (14.3%) L-Aspartase-like (14.3%) Fumarase C, C-terminal (14.3%)" NFKDLDQISVVVGHDCR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.2.- (50%) 5.4.2.2 (50%)" "Phosphotransferases (phosphomutases) (50%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (50%)" "GO:0005975 (24.1%) GO:0006166 (24.1%)" "GO:0000287 (24.1%) GO:0008973 (24.1%) GO:0004614 (3.4%)" "carbohydrate metabolic process (24.1%) purine ribonucleoside salvage (24.1%)" "magnesium ion binding (24.1%) phosphopentomutase activity (24.1%) phosphoglucomutase activity (3.4%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" EGDVLLGISTSGNSANVIK root "5.3.1.28 (98.6%) 5.3.1.- (1.4%)" "D-sedoheptulose-7-phosphate isomerase (98.6%) Interconverting aldoses and ketoses (1.4%)" "GO:2001061 (11.6%) GO:0009244 (9%) GO:0005975 (6.9%)" "GO:0005737 (16.2%) GO:0005829 (0.1%) GO:0032991 (0.1%)" "GO:0097367 (16.9%) GO:0008968 (16.2%) GO:0008270 (15.7%)" "D-glycero-D-manno-heptose 7-phosphate biosynthetic process (11.6%) lipopolysaccharide core region biosynthetic process (9%) carbohydrate metabolic process (6.9%)" "cytoplasm (16.2%) cytosol (0.1%) protein-containing complex (0.1%)" "carbohydrate derivative binding (16.9%) D-sedoheptulose 7-phosphate isomerase activity (16.2%) zinc ion binding (15.7%)" "IPR001347 (20.2%) IPR035461 (20.2%) IPR046348 (20.2%)" "SIS domain (20.2%) GmhA/DiaA (20.2%) SIS domain superfamily (20.2%)" VVLKLPAALAPVK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.7%) GO:0015966 (12.1%) GO:0044281 (0.6%)" "GO:0005737 (12.7%) GO:0070062 (12.1%) GO:1990742 (12.1%)" "GO:0004820 (12.7%) GO:0005524 (12.7%) GO:0004081 (12.1%)" "glycyl-tRNA aminoacylation (12.7%) diadenosine tetraphosphate biosynthetic process (12.1%) small molecule metabolic process (0.6%)" "cytoplasm (12.7%) extracellular exosome (12.1%) microvesicle (12.1%)" "glycine-tRNA ligase activity (12.7%) ATP binding (12.7%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.1%)" "IPR004154 (11.2%) IPR006195 (11.2%) IPR027031 (11.2%)" "Anticodon-binding (11.2%) Aminoacyl-tRNA synthetase, class II (11.2%) Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 (11.2%)" INPVSIGGFTTAER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) "GO:0005975 (25%) GO:0030203 (25%)" GO:0016020 (25%) GO:0004563 (25%) "carbohydrate metabolic process (25%) glycosaminoglycan metabolic process (25%)" membrane (25%) beta-N-acetylhexosaminidase activity (25%) "IPR011658 (16.7%) IPR015882 (16.7%) IPR015883 (16.7%)" "PA14 domain (16.7%) Beta-hexosaminidase, bacterial type, N-terminal (16.7%) Glycoside hydrolase family 20, catalytic domain (16.7%)" DQIIEAVSAMSVMDVVELISAMEEK Pseudomonadati Bacteria Pseudomonadati GO:0006412 (24.9%) "GO:0022625 (24.6%) GO:0005840 (0.6%) GO:1990904 (0.4%)" "GO:0003735 (24.9%) GO:0003729 (24.6%)" translation (24.9%) "cytosolic large ribosomal subunit (24.6%) ribosome (0.6%) ribonucleoprotein complex (0.4%)" "structural constituent of ribosome (24.9%) mRNA binding (24.6%)" "IPR008932 (20.2%) IPR036235 (20.2%) IPR000206 (19.9%)" "Large ribosomal subunit protein bL12, oligomerization (20.2%) Large ribosomal subunit protein bL12, oligomerization domain superfamily (20.2%) Large ribosomal subunit protein bL12 (19.9%)" NFPLDELVLFGSKR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11%) GO:0009089 (11%) GO:0009097 (11%)" GO:0016020 (0.1%) "GO:0051287 (11.2%) GO:0004073 (11%) GO:0046983 (11%)" "threonine biosynthetic process (11%) lysine biosynthetic process via diaminopimelate (11%) isoleucine biosynthetic process (11%)" membrane (0.1%) "NAD binding (11.2%) aspartate-semialdehyde dehydrogenase activity (11%) protein dimerization activity (11%)" "IPR000534 (18%) IPR036291 (18%) IPR005986 (17.9%)" "Semialdehyde dehydrogenase, NAD-binding (18%) NAD(P)-binding domain superfamily (18%) Aspartate-semialdehyde dehydrogenase, beta-type (17.9%)" HTPFFDGYRPQFYFR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (19.9%) GO:0005737 (1.3%) GO:0032045 (1.3%)" "GO:0003746 (21.5%) GO:0005525 (21.4%) GO:0003924 (17.8%)" "cytosol (19.9%) cytoplasm (1.3%) guanyl-nucleotide exchange factor complex (1.3%)" "translation elongation factor activity (21.5%) GTP binding (21.4%) GTPase activity (17.8%)" "IPR004160 (9.5%) IPR050055 (9.5%) IPR009001 (9.5%)" "Translation elongation factor EFTu/EF1A, C-terminal (9.5%) Elongation factor Tu GTPase (9.5%) Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (9.5%)" NRVIGMGGALDSSR Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (26.1%) GO:0006099 (24.1%)" "GO:0004459 (26.1%) GO:0030060 (23.7%)" "lactate metabolic process (26.1%) tricarboxylic acid cycle (24.1%)" "L-lactate dehydrogenase (NAD+) activity (26.1%) L-malate dehydrogenase (NAD+) activity (23.7%)" "IPR001236 (16.9%) IPR015955 (16.9%) IPR022383 (16.9%)" "Lactate/malate dehydrogenase, N-terminal (16.9%) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (16.9%) Lactate/malate dehydrogenase, C-terminal (16.9%)" AQLLDAVKDADAVIIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (50%) GO:0016616 (33.3%) GO:0004617 (16.7%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (33.3%) phosphoglycerate dehydrogenase activity (16.7%)" "IPR006139 (25%) IPR006140 (25%) IPR029752 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 (25%)" VGGGDSFSGGIIHGLLTKPDQGAALEFAVAASALK root GO:0016301 (100%) kinase activity (100%) "IPR011611 (33.3%) IPR029056 (33.3%) IPR052700 (33.3%)" "Carbohydrate kinase PfkB (33.3%) Ribokinase-like (33.3%) Carbohydrate kinase PfkB-like (33.3%)" SSSSYNSNVHPNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GIDKQAVGQCAANIR Bacillati Bacteria Bacillati GO:0002181 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" cytoplasmic translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000702 (20%) IPR002358 (20%) IPR019906 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, conserved site (20%) Large ribosomal subunit protein uL6, bacteria (20%)" SAEQLTQISEK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.1%) IPR004154 (11.1%) IPR004499 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Anticodon-binding (11.1%) Proline-tRNA ligase, class IIa, archaeal-type (11.1%)" ISEIEADLEKLTR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria IPR020911 (100%) Uncharacterised protein family UPF0325 (100%) NIEFFEAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.8%) GO:0002181 (0.1%)" "GO:0005840 (20.3%) GO:1990904 (19.8%) GO:0005737 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.8%) GO:0070180 (0.1%)" "translation (19.8%) cytoplasmic translation (0.1%)" "ribosome (20.3%) ribonucleoprotein complex (19.8%) cytoplasm (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.8%) large ribosomal subunit rRNA binding (0.1%)" "IPR000244 (14.3%) IPR020594 (14.3%) IPR009027 (14.3%)" "Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9, bacteria/chloroplast (14.3%) Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.3%)" IVIKPNIGWDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR007160 (100%) Domain of unknown function DUF362 (100%) GVREDKVTLNDVQVLAHSR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR024620 (100%) Domain of unknown function DUF3869 (100%) KIGGAPANFAYHVSQFGFDSR Bacteria Bacteria "2.7.1.- (72.7%) 2.7.1.4 (13.6%) 2.7.1.11 (4.5%)" "Phosphotransferases with an alcohol group as acceptor (72.7%) fructokinase (13.6%) 6-phosphofructokinase (4.5%)" "GO:0016301 (94.4%) GO:0008865 (2.8%) GO:0003872 (0.9%)" "kinase activity (94.4%) fructokinase activity (2.8%) 6-phosphofructokinase activity (0.9%)" "IPR002173 (25.1%) IPR011611 (25.1%) IPR029056 (24.9%)" "Carbohydrate/purine kinase, PfkB, conserved site (25.1%) Carbohydrate kinase PfkB (25.1%) Ribokinase-like (24.9%)" FYGLGADGTVGANK root "1.2.7.- (51.6%) 1.2.7.1 (45.5%) 1.2.1.51 (1.6%)" "With an iron-sulfur protein as acceptor (51.6%) pyruvate synthase (45.5%) pyruvate dehydrogenase (NADP(+)) (1.6%)" "GO:0006979 (15.1%) GO:0022900 (14.9%) GO:0044281 (10.2%)" "GO:0051539 (15%) GO:0005506 (14.9%) GO:0030976 (14.5%)" "response to oxidative stress (15.1%) electron transport chain (14.9%) small molecule metabolic process (10.2%)" "4 iron, 4 sulfur cluster binding (15%) iron ion binding (14.9%) thiamine pyrophosphate binding (14.5%)" "IPR050722 (7.8%) IPR019752 (7.8%) IPR002869 (7.8%)" "Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (7.8%) Pyruvate-flavodoxin oxidoreductase, central domain (7.8%)" GGFQRPQQQPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.4.21.107 (66.7%) 3.4.21.- (33.3%)" "peptidase Do (66.7%) Serine endopeptidases (33.3%)" GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001478 (17.1%) IPR001940 (17.1%) IPR009003 (17.1%)" "PDZ domain (17.1%) Peptidase S1C (17.1%) Peptidase S1, PA clan (17.1%)" HIAAPNETVSTMGFEAATR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.3.1.180 (94.3%) 2.3.1.41 (5.7%)" "beta-ketoacyl-[acyl-carrier-protein] synthase III (94.3%) beta-ketoacyl-[acyl-carrier-protein] synthase I (5.7%)" "GO:0006633 (25.2%) GO:0044550 (0.5%) GO:0006631 (0.2%)" "GO:0005737 (22.4%) GO:0005829 (0.2%)" "GO:0004315 (25.4%) GO:0033818 (25.2%) GO:0016746 (0.7%)" "fatty acid biosynthetic process (25.2%) secondary metabolite biosynthetic process (0.5%) fatty acid metabolic process (0.2%)" "cytoplasm (22.4%) cytosol (0.2%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (25.4%) beta-ketoacyl-acyl-carrier-protein synthase III activity (25.2%) acyltransferase activity (0.7%)" "IPR016039 (26.1%) IPR013751 (25.5%) IPR004655 (24.5%)" "Thiolase-like (26.1%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (25.5%) Beta-ketoacyl-[acyl-carrier-protein] synthase III (24.5%)" TNAALKEVGAL Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.37 (99%) 1.1.1.- (1%)" "malate dehydrogenase (99%) With NAD(+) or NADP(+) as acceptor (1%)" "GO:0006089 (25.3%) GO:0006099 (23.6%) GO:0019752 (0.3%)" GO:0005737 (0.3%) "GO:0004459 (25.3%) GO:0030060 (25%) GO:0016491 (0.3%)" "lactate metabolic process (25.3%) tricarboxylic acid cycle (23.6%) carboxylic acid metabolic process (0.3%)" cytoplasm (0.3%) "L-lactate dehydrogenase (NAD+) activity (25.3%) L-malate dehydrogenase (NAD+) activity (25%) oxidoreductase activity (0.3%)" "IPR015955 (16.8%) IPR022383 (16.8%) IPR001236 (16.6%)" "Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (16.8%) Lactate/malate dehydrogenase, C-terminal (16.8%) Lactate/malate dehydrogenase, N-terminal (16.6%)" VLNDGYNYGANTHASTSTYKIESK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.-.- (50%) 1.2.7.11 (25%) 1.2.7.3 (25%)" "Acting on the aldehyde or oxo group of donors (50%) 2-oxoacid oxidoreductase (ferredoxin) (25%) 2-oxoglutarate synthase (25%)" GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.5%) IPR002880 (12.5%) IPR009014 (12.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" YVVHNVAHR root 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (14.3%) GO:0019740 (14.3%) GO:0009314 (0%)" "GO:0005737 (14.3%) GO:0016020 (14.3%) GO:0005829 (0%)" "GO:0004356 (14.3%) GO:0005524 (14%) GO:0046872 (13.9%)" "glutamine biosynthetic process (14.3%) nitrogen utilization (14.3%) response to radiation (0%)" "cytoplasm (14.3%) membrane (14.3%) cytosol (0%)" "glutamine synthetase activity (14.3%) ATP binding (14%) metal ion binding (13.9%)" "IPR008146 (12.8%) IPR014746 (12.8%) IPR027303 (12.7%)" "Glutamine synthetase, catalytic domain (12.8%) Glutamine synthetase/guanido kinase, catalytic domain (12.8%) Glutamine synthetase, glycine-rich site (12.7%)" GKIPLAQLISEQIDGIPVALTNDANAAAIGEMTYGAAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.2 (100%) glucokinase (100%) GO:0004340 (100%) glucokinase activity (100%) "IPR000600 (33.3%) IPR043129 (33.3%) IPR049874 (33.3%)" "ROK family (33.3%) ATPase, nucleotide binding domain (33.3%) ROK, conserved site (33.3%)" IYKEYHEAVDQQFDR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR007139 (100%) Protein of unknown function DUF349 (100%) NDNANRPNRNNNSKPNGNNNQGGGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (9.1%) IPR000795 (9.1%) IPR005225 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translational (tr)-type GTP-binding domain (9.1%) Small GTP-binding domain (9.1%)" TTVINDPVGIHAR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0009401 (39.3%) GO:0005737 (39.3%) "GO:0016740 (17.9%) GO:0008965 (3.6%)" phosphoenolpyruvate-dependent sugar phosphotransferase system (39.3%) cytoplasm (39.3%) "transferase activity (17.9%) phosphoenolpyruvate-protein phosphotransferase activity (3.6%)" "IPR000032 (25%) IPR001020 (25%) IPR035895 (25%)" "Phosphocarrier protein HPr-like (25%) Phosphotransferase system, HPr histidine phosphorylation site (25%) HPr-like superfamily (25%)" KLVAAGPKL Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.3%) GO:0005829 (17.3%) "GO:0005524 (17.6%) GO:0004612 (17.3%) GO:0046872 (16.7%)" gluconeogenesis (17.3%) cytosol (17.3%) "ATP binding (17.6%) phosphoenolpyruvate carboxykinase (ATP) activity (17.3%) metal ion binding (16.7%)" "IPR001272 (25%) IPR013035 (25%) IPR008210 (24.1%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%) Phosphoenolpyruvate carboxykinase, N-terminal (24.1%)" IVQVIGAVVDVEFPQDAVPR root "7.1.2.2 (96.1%) 3.6.3.14 (3.9%)" "H(+)-transporting two-sector ATPase (96.1%) Transferred entry: 7.1.2.2 (3.9%)" GO:0042777 (0%) "GO:0045259 (23.4%) GO:0005886 (22.8%) GO:0016020 (0%)" "GO:0005524 (23.4%) GO:0046933 (23.4%) GO:0016787 (4.9%)" proton motive force-driven plasma membrane ATP synthesis (0%) "proton-transporting ATP synthase complex (23.4%) plasma membrane (22.8%) membrane (0%)" "ATP binding (23.4%) proton-transporting ATP synthase activity, rotational mechanism (23.4%) hydrolase activity (4.9%)" "IPR004100 (10.3%) IPR036121 (10.3%) IPR050053 (10.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily (10.3%) ATPase alpha/beta chains (10.3%)" KIADKNHIEMLDCYTGFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (24.1%) GO:0006166 (24.1%)" "GO:0000287 (24.1%) GO:0008973 (24.1%) GO:0004614 (3.8%)" "carbohydrate metabolic process (24.1%) purine ribonucleoside salvage (24.1%)" "magnesium ion binding (24.1%) phosphopentomutase activity (24.1%) phosphoglucomutase activity (3.8%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" YLAIADELFGADWADAR root 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (19.9%) GO:0016052 (19.8%) GO:0006018 (18.3%)" "GO:0005737 (19.6%) GO:0005829 (0.3%) GO:0016020 (0.2%)" "GO:0004139 (20.1%) GO:0016829 (0.8%) GO:0004645 (0.2%)" "deoxyribonucleotide catabolic process (19.9%) carbohydrate catabolic process (19.8%) 2-deoxyribose 1-phosphate catabolic process (18.3%)" "cytoplasm (19.6%) cytosol (0.3%) membrane (0.2%)" "deoxyribose-phosphate aldolase activity (20.1%) lyase activity (0.8%) 1,4-alpha-oligoglucan phosphorylase activity (0.2%)" "IPR013785 (25.3%) IPR011343 (25%) IPR002915 (24.8%)" "Aldolase-type TIM barrel (25.3%) Deoxyribose-phosphate aldolase (25%) DeoC/FbaB/LacD aldolase (24.8%)" TVHSLIVGMSHFHPTFHFVAPNELR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006207 (16.7%) GO:0006520 (16.7%) GO:0044205 (16.7%)" GO:0005829 (16.7%) "GO:0004070 (16.7%) GO:0016597 (16.7%)" "'de novo' pyrimidine nucleobase biosynthetic process (16.7%) amino acid metabolic process (16.7%) 'de novo' UMP biosynthetic process (16.7%)" cytosol (16.7%) "aspartate carbamoyltransferase activity (16.7%) amino acid binding (16.7%)" "IPR002082 (20%) IPR006130 (20%) IPR006131 (20%)" "Aspartate carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%)" LVDSGEVPEKILPGVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016646 (100%) oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor (100%) "IPR016040 (33.3%) IPR036291 (33.3%) IPR051606 (33.3%)" "NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%) Polyketide Oxidoreductase-like (33.3%)" AIDKPFLLPIEDVFSISGR root "3.6.5.3 (99.9%) 2.7.1.25 (0.1%)" "protein-synthesizing GTPase (99.9%) adenylyl-sulfate kinase (0.1%)" "GO:0006414 (0%) GO:0046677 (0%) GO:0032790 (0%)" "GO:0005829 (17.7%) GO:0032045 (9.1%) GO:0005886 (0.8%)" "GO:0003746 (18%) GO:0005525 (17.7%) GO:0003924 (14.9%)" "translational elongation (0%) response to antibiotic (0%) ribosome disassembly (0%)" "cytosol (17.7%) guanyl-nucleotide exchange factor complex (9.1%) plasma membrane (0.8%)" "translation elongation factor activity (18%) GTP binding (17.7%) GTPase activity (14.9%)" "IPR050055 (10.8%) IPR009000 (10.1%) IPR004161 (9.8%)" "Elongation factor Tu GTPase (10.8%) Translation protein, beta-barrel domain superfamily (10.1%) Translation elongation factor EFTu-like, domain 2 (9.8%)" GYNYEDAIVLNER root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.7%) GO:0006508 (0.6%)" "GO:0000428 (19.7%) GO:0009536 (0.4%)" "GO:0003677 (19.7%) GO:0003899 (19.7%) GO:0032549 (19.7%)" "DNA-templated transcription (19.7%) proteolysis (0.6%)" "DNA-directed RNA polymerase complex (19.7%) plastid (0.4%)" "DNA binding (19.7%) DNA-directed RNA polymerase activity (19.7%) ribonucleoside binding (19.7%)" "IPR007120 (8.1%) IPR015712 (8.1%) IPR037033 (8%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (8.1%) DNA-directed RNA polymerase, subunit 2 (8.1%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily (8%)" LAAETIDVSLPGR root 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) "GO:0006432 (16.6%) GO:0043039 (0%)" "GO:0005737 (16.6%) GO:0009328 (0.1%) GO:0005829 (0%)" "GO:0004826 (16.6%) GO:0005524 (16.6%) GO:0000049 (16.5%)" "phenylalanyl-tRNA aminoacylation (16.6%) tRNA aminoacylation (0%)" "cytoplasm (16.6%) phenylalanine-tRNA ligase complex (0.1%) cytosol (0%)" "phenylalanine-tRNA ligase activity (16.6%) ATP binding (16.6%) tRNA binding (16.5%)" "IPR045864 (14.5%) IPR002319 (14.4%) IPR004188 (14.4%)" "Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.5%) Phenylalanyl-tRNA synthetase (14.4%) Phenylalanine-tRNA ligase, class II, N-terminal (14.4%)" TVPGVEEGVVER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (24.7%) GO:0019521 (24.7%)" "GO:0004616 (25%) GO:0050661 (25%) GO:0016491 (0.7%)" "pentose-phosphate shunt (24.7%) D-gluconate metabolic process (24.7%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%) oxidoreductase activity (0.7%)" "IPR006115 (12.6%) IPR006183 (12.6%) IPR036291 (12.6%)" "6-phosphogluconate dehydrogenase, NADP-binding (12.6%) 6-phosphogluconate dehydrogenase (12.6%) NAD(P)-binding domain superfamily (12.6%)" MELDGYMVLEGATIAAYNHMNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" TLNSEASQATSPIKVVNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) YLPDYPNLNELK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (25%) GO:0005829 (25%) "GO:0004830 (25%) GO:0005524 (25%)" tryptophanyl-tRNA aminoacylation (25%) cytosol (25%) "tryptophan-tRNA ligase activity (25%) ATP binding (25%)" "IPR001412 (20%) IPR002305 (20%) IPR002306 (20%)" "Aminoacyl-tRNA synthetase, class I, conserved site (20%) Aminoacyl-tRNA synthetase, class Ic (20%) Tryptophan-tRNA ligase (20%)" LCWGATATQEEVNAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" TNLAGLMDGYFHHEASIEGGQHLNVNVMNR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (29.9%) GO:0005975 (0%) GO:0044814 (0%)" "GO:0005829 (32.1%) GO:0016020 (0%)" "GO:0008861 (32.1%) GO:0016829 (5.3%) GO:0016746 (0.3%)" "glucose metabolic process (29.9%) carbohydrate metabolic process (0%) pyruvate fermentation via PFL (0%)" "cytosol (32.1%) membrane (0%)" "formate C-acetyltransferase activity (32.1%) lyase activity (5.3%) acyltransferase activity (0.3%)" "IPR001150 (20.4%) IPR050244 (20.4%) IPR019777 (20.3%)" "Glycine radical domain (20.4%) Autonomous Glycyl Radical Cofactor (20.4%) Formate C-acetyltransferase glycine radical, conserved site (20.3%)" ILPGDKVTVELSPYDLTK Bacteria Bacteria GO:0005829 (24.9%) "GO:0003743 (25.2%) GO:0043022 (24.9%) GO:0019843 (24%)" cytosol (24.9%) "translation initiation factor activity (25.2%) ribosome binding (24.9%) rRNA binding (24%)" "IPR004368 (25.2%) IPR006196 (25.2%) IPR012340 (25.1%)" "Translation initiation factor IF-1 (25.2%) RNA-binding domain, S1, IF1 type (25.2%) Nucleic acid-binding, OB-fold (25.1%)" AYVHCFMDGR Bacteria Bacteria 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (19.9%) GO:0006096 (19.9%) GO:0043937 (0.7%)" GO:0005829 (19.9%) "GO:0004619 (19.9%) GO:0030145 (19.9%)" "glucose catabolic process (19.9%) glycolytic process (19.9%) regulation of sporulation (0.7%)" cytosol (19.9%) "phosphoglycerate mutase activity (19.9%) manganese ion binding (19.9%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" SYADMMEPIYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" MNQLSDRLNSLSPSATLAMSQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" VKAQDVQRHPYKPK root "GO:0006412 (24.3%) GO:0000027 (0.2%) GO:0002181 (0.2%)" "GO:0022625 (24%) GO:0005840 (1%) GO:1990904 (0.5%)" "GO:0003735 (24.5%) GO:0008097 (24.3%)" "translation (24.3%) ribosomal large subunit assembly (0.2%) cytoplasmic translation (0.2%)" "cytosolic large ribosomal subunit (24%) ribosome (1%) ribonucleoprotein complex (0.5%)" "structural constituent of ribosome (24.5%) 5S rRNA binding (24.3%)" "IPR011035 (20.1%) IPR020056 (20.1%) IPR029751 (20.1%)" "Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (20.1%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (20.1%) Large ribosomal subunit protein bL25, L25 domain (20.1%)" VGAKPLQNVTLDTLLDER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" IGKDIPPYTLIGRDPIVYCGINIVGLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.129 (100%) acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (100%) GO:0009245 (33.3%) GO:0016020 (33.3%) GO:0008780 (33.3%) lipid A biosynthetic process (33.3%) membrane (33.3%) acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity (33.3%) "IPR001451 (20%) IPR010137 (20%) IPR011004 (20%)" "Hexapeptide repeat (20%) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (20%) Trimeric LpxA-like superfamily (20%)" SALEVAMTVLHAGGKFDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.6.2.2 (98.3%) 5.99.1.3 (1.7%)" "DNA topoisomerase (ATP-hydrolyzing) (98.3%) Transferred entry: 5.6.2.2 (1.7%)" "GO:0006265 (12.9%) GO:0006261 (11.9%) GO:0032259 (0.2%)" "GO:0005694 (11.9%) GO:0005737 (11.9%)" "GO:0003677 (12.9%) GO:0005524 (12.9%) GO:0046872 (12.4%)" "DNA topological change (12.9%) DNA-templated DNA replication (11.9%) methylation (0.2%)" "chromosome (11.9%) cytoplasm (11.9%)" "DNA binding (12.9%) ATP binding (12.9%) metal ion binding (12.4%)" "IPR000565 (7.5%) IPR001241 (7.5%) IPR003594 (7.5%)" "DNA topoisomerase, type IIA, subunit B (7.5%) DNA topoisomerase, type IIA (7.5%) Histidine kinase/HSP90-like ATPase domain (7.5%)" GLLHGIGTLLTGMK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.1.1.- (100%) Hydron translocation or charge separation linked to oxidoreductase reactions (100%) "GO:0005886 (18.7%) GO:0016020 (1.3%)" "GO:0048038 (20%) GO:0051539 (20%) GO:0005506 (18.7%)" "plasma membrane (18.7%) membrane (1.3%)" "quinone binding (20%) 4 iron, 4 sulfur cluster binding (20%) iron ion binding (18.7%)" "IPR010226 (33.3%) IPR017896 (33.3%) IPR017900 (33.3%)" "NADH-quinone oxidoreductase, chain I (33.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (33.3%) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (33.3%)" WIVQAGYPSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR006311 (20%) IPR013022 (20%) IPR019546 (20%)" "Twin-arginine translocation pathway, signal sequence (20%) Xylose isomerase-like, TIM barrel domain (20%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (20%)" SEMCLVMEQMGLVVEAHHHEVATAGQNEVATR root 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (14.3%) GO:0019740 (14.3%) GO:0009314 (0%)" "GO:0005737 (14.3%) GO:0016020 (14.3%) GO:0005829 (0%)" "GO:0004356 (14.3%) GO:0005524 (14.1%) GO:0046872 (14%)" "glutamine biosynthetic process (14.3%) nitrogen utilization (14.3%) response to radiation (0%)" "cytoplasm (14.3%) membrane (14.3%) cytosol (0%)" "glutamine synthetase activity (14.3%) ATP binding (14.1%) metal ion binding (14%)" "IPR008146 (12.6%) IPR014746 (12.6%) IPR008147 (12.5%)" "Glutamine synthetase, catalytic domain (12.6%) Glutamine synthetase/guanido kinase, catalytic domain (12.6%) Glutamine synthetase, N-terminal domain (12.5%)" VANYDPSAPIEVSYR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.1.6.- (50%) 3.1.6.1 (50%)" "Sulfuric ester hydrolases (50%) arylsulfatase (type I) (50%)" "GO:0016787 (91.1%) GO:0004065 (8.9%)" "hydrolase activity (91.1%) arylsulfatase activity (8.9%)" "IPR000917 (25%) IPR017850 (25%) IPR024607 (25%)" "Sulfatase, N-terminal (25%) Alkaline-phosphatase-like, core domain superfamily (25%) Sulfatase, conserved site (25%)" LNEKHYGSLQGLNK Pseudomonadati Bacteria Pseudomonadati 5.4.2.11 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (100%) "GO:0006094 (33.3%) GO:0006096 (33.3%)" GO:0004619 (33.3%) "gluconeogenesis (33.3%) glycolytic process (33.3%)" phosphoglycerate mutase activity (33.3%) "IPR001345 (25%) IPR005952 (25%) IPR013078 (25%)" "Phosphoglycerate/bisphosphoglycerate mutase, active site (25%) Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%)" QITVGEHAPAEAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "1.2.7.1 (80%) 1.2.7.- (20%)" "pyruvate synthase (80%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (13%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (13%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" FKELVETEGALQFVDEHVLGVAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (50%) GO:0004601 (20%) GO:0016491 (20%)" "iron ion binding (50%) peroxidase activity (20%) oxidoreductase activity (20%)" "IPR003251 (12.5%) IPR009040 (12.5%) IPR009078 (12.5%)" "Rubrerythrin, diiron-binding domain (12.5%) Ferritin-like diiron domain (12.5%) Ferritin-like superfamily (12.5%)" VVEDAVKEMLEHMASTLAQGERIEIR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006310 (14.3%) GO:0006355 (14.3%) GO:0006417 (14.3%)" "GO:0005694 (14.3%) GO:0005829 (14.3%)" "GO:0003677 (14.3%) GO:0030527 (14.3%)" "DNA recombination (14.3%) regulation of DNA-templated transcription (14.3%) regulation of translation (14.3%)" "chromosome (14.3%) cytosol (14.3%)" "DNA binding (14.3%) structural constituent of chromatin (14.3%)" "IPR000119 (25%) IPR005685 (25%) IPR010992 (25%)" "Histone-like DNA-binding protein (25%) Integration host factor, beta subunit (25%) Integration host factor (IHF)-like DNA-binding domain superfamily (25%)" DATPMFVYGVNHTTYAGQDIISNASCTTNCLAPIAK Pseudomonadati Bacteria Pseudomonadati 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (11.9%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (11.9%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" MKLPIYLDYSATTPVDPR root 2.8.1.7 (100%) cysteine desulfurase (100%) "GO:0044571 (16.4%) GO:0008033 (0%) GO:0002143 (0%)" "GO:1990221 (16.4%) GO:0005737 (0%) GO:0005829 (0%)" "GO:0031071 (16.8%) GO:0046872 (16.7%) GO:0051537 (16.6%)" "[2Fe-2S] cluster assembly (16.4%) tRNA processing (0%) tRNA wobble position uridine thiolation (0%)" "L-cysteine desulfurase complex (16.4%) cytoplasm (0%) cytosol (0%)" "cysteine desulfurase activity (16.8%) metal ion binding (16.7%) 2 iron, 2 sulfur cluster binding (16.6%)" "IPR015421 (14.4%) IPR015424 (14.4%) IPR000192 (14.4%)" "Pyridoxal phosphate-dependent transferase, major domain (14.4%) Pyridoxal phosphate-dependent transferase (14.4%) Aminotransferase class V domain (14.4%)" HTFTLVCYTDDIKSGDTILK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR038179 (100%) NigD-like, N-terminal domain superfamily (100%) ELSGDFEELMALADKYTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" LTDKINIPFHIAEDPLLSVAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0000902 (25.3%) GO:0008360 (25.3%)" GO:0005737 (25.3%) GO:0005524 (24.2%) "cell morphogenesis (25.3%) regulation of cell shape (25.3%)" cytoplasm (25.3%) ATP binding (24.2%) "IPR004753 (33.3%) IPR043129 (33.3%) IPR056546 (33.3%)" "Cell shape determining protein MreB (33.3%) ATPase, nucleotide binding domain (33.3%) MreB/MamK-like (33.3%)" RGFEGGQMPLYR root "GO:0006412 (25.2%) GO:0002181 (0%) GO:0006974 (0%)" "GO:0022625 (24.9%) GO:0005840 (0.4%) GO:0015934 (0.3%)" "GO:0003735 (25.2%) GO:0019843 (22.3%) GO:0003729 (1.5%)" "translation (25.2%) cytoplasmic translation (0%) DNA damage response (0%)" "cytosolic large ribosomal subunit (24.9%) ribosome (0.4%) large ribosomal subunit (0.3%)" "structural constituent of ribosome (25.2%) rRNA binding (22.3%) mRNA binding (1.5%)" "IPR005749 (20.4%) IPR036227 (20.3%) IPR030878 (20.1%)" "Large ribosomal subunit protein uL15, bacteria (20.4%) Large ribosomal subunit protein uL15/eL18 superfamily (20.3%) Large ribosomal subunit protein uL15 (20.1%)" ANVPTELSLNSKPQLAGAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.21.- (100%) Serine endopeptidases (100%) GO:0006508 (32.8%) GO:0005737 (32.8%) "GO:0008236 (32.8%) GO:0003743 (1.6%)" proteolysis (32.8%) cytoplasm (32.8%) "serine-type peptidase activity (32.8%) translation initiation factor activity (1.6%)" "IPR005151 (12.5%) IPR011659 (12.5%) IPR012393 (12.5%)" "Tail specific protease (12.5%) WD40-like beta-propeller (12.5%) Tricorn protease (12.5%)" NVQELGYINNKPLVFDNEPAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.5.1.108 (50%) 4.2.1.59 (50%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase (50%) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (50%)" "GO:0006633 (14.3%) GO:0009245 (14.3%)" "GO:0005737 (14.3%) GO:0016020 (14.3%)" "GO:0046872 (14.3%) GO:0103117 (14.3%) GO:0019171 (10.7%)" "fatty acid biosynthetic process (14.3%) lipid A biosynthetic process (14.3%)" "cytoplasm (14.3%) membrane (14.3%)" "metal ion binding (14.3%) UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.3%) (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (10.7%)" "IPR004463 (14.3%) IPR010084 (14.3%) IPR011334 (14.3%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.3%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (14.3%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.3%)" SSVDKFYSQEVLQQMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.12 (100%) aspartate--tRNA ligase (100%) "GO:0006422 (19.5%) GO:0006418 (0.6%)" GO:0005737 (20.1%) "GO:0005524 (20.1%) GO:0003676 (19.5%) GO:0004815 (19.5%)" "aspartyl-tRNA aminoacylation (19.5%) tRNA aminoacylation for protein translation (0.6%)" cytoplasm (20.1%) "ATP binding (20.1%) nucleic acid binding (19.5%) aspartate-tRNA ligase activity (19.5%)" "IPR004115 (9.3%) IPR004364 (9.3%) IPR029351 (9.3%)" "GAD-like domain superfamily (9.3%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.3%) GAD domain (9.3%)" INSAKIDKNQQINIYNTAEFMK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0009279 (33.3%) "GO:0015288 (33.3%) GO:0030247 (33.3%)" cell outer membrane (33.3%) "porin activity (33.3%) polysaccharide binding (33.3%)" "IPR006665 (25%) IPR006690 (25%) IPR036737 (25%)" "OmpA-like domain (25%) Outer membrane protein, OmpA-like, conserved site (25%) OmpA-like domain superfamily (25%)" GQLVPDELIVDMLANVLDSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.4.3 (100%) adenylate kinase (100%) GO:0044209 (25%) GO:0005737 (25%) "GO:0004017 (25%) GO:0005524 (25%)" AMP salvage (25%) cytoplasm (25%) "AMP kinase activity (25%) ATP binding (25%)" "IPR000850 (33.3%) IPR027417 (33.3%) IPR033690 (33.3%)" "Adenylate kinase/UMP-CMP kinase (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%) Adenylate kinase, conserved site (33.3%)" DVELEKEVLAEAQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" DGSVVDAEVLRGVDPSLDKEALR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0015031 (16.7%) GO:0015891 (16.7%) GO:0055085 (16.7%)" "GO:0030288 (16.7%) GO:0098797 (16.7%)" GO:0031992 (16.7%) "protein transport (16.7%) siderophore transport (16.7%) transmembrane transport (16.7%)" "outer membrane-bounded periplasmic space (16.7%) plasma membrane protein complex (16.7%)" energy transducer activity (16.7%) "IPR003538 (25%) IPR006260 (25%) IPR037682 (25%)" "Gram-negative bacterial TonB protein (25%) TonB/TolA, C-terminal (25%) TonB, C-terminal (25%)" MGHQSANQYVNPYFYDIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0003755 (100%) peptidyl-prolyl cis-trans isomerase activity (100%) "IPR032252 (50%) IPR046357 (50%)" "Protein of unknown function DUF4827 (50%) Peptidyl-prolyl cis-trans isomerase domain superfamily (50%)" AIVPSGASTGAFEAVELR Bacillati Bacteria Bacillati 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.9%) "GO:0000015 (16.9%) GO:0005576 (16.7%) GO:0009986 (15.9%)" "GO:0000287 (16.9%) GO:0004634 (16.9%)" glycolytic process (16.9%) "phosphopyruvate hydratase complex (16.9%) extracellular region (16.7%) cell surface (15.9%)" "magnesium ion binding (16.9%) phosphopyruvate hydratase activity (16.9%)" "IPR000941 (16.8%) IPR020811 (16.8%) IPR020809 (16.6%)" "Enolase (16.8%) Enolase, N-terminal (16.8%) Enolase, conserved site (16.6%)" AMGNAQLFIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" GO:0005737 (16.7%) "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16.7%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" cytoplasm (16.7%) "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16.7%)" "IPR002226 (12.5%) IPR010582 (12.5%) IPR011614 (12.5%)" "Catalase haem-binding site (12.5%) Catalase immune-responsive domain (12.5%) Catalase core domain (12.5%)" HTFLVSLLGIK Pseudomonadati Bacteria Pseudomonadati 2.7.7.4 (100%) sulfate adenylyltransferase (100%) "GO:0000103 (16.1%) GO:0070814 (15.9%) GO:0006790 (0.5%)" "GO:0003924 (16.5%) GO:0005524 (16.5%) GO:0005525 (16.5%)" "sulfate assimilation (16.1%) hydrogen sulfide biosynthetic process (15.9%) sulfur compound metabolic process (0.5%)" "GTPase activity (16.5%) ATP binding (16.5%) GTP binding (16.5%)" "IPR000795 (9.1%) IPR011779 (9.1%) IPR044138 (9.1%)" "Translational (tr)-type GTP-binding domain (9.1%) Sulphate adenylyltransferase, large subunit (9.1%) Sulfate adenylyltransferase subunit CysN, Domain II (9.1%)" KVTLNESIFGIEPNDHAIYLDVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (19.2%) GO:0003723 (0.8%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (19.2%) RNA binding (0.8%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" TGDAGRLEGNTLFFTER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.2.1.3 (100%) long-chain-fatty-acid--CoA ligase (100%) GO:0016020 (50%) GO:0004467 (50%) membrane (50%) long-chain fatty acid-CoA ligase activity (50%) "IPR000873 (33.3%) IPR020845 (33.3%) IPR042099 (33.3%)" "AMP-dependent synthetase/ligase domain (33.3%) AMP-binding, conserved site (33.3%) ANL, N-terminal domain (33.3%)" LLDGLDTIDWTDSLKETQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.4 (100%) leucine--tRNA ligase (100%) GO:0006429 (20%) GO:0005829 (20%) "GO:0002161 (20%) GO:0004823 (20%) GO:0005524 (20%)" leucyl-tRNA aminoacylation (20%) cytosol (20%) "aminoacyl-tRNA deacylase activity (20%) leucine-tRNA ligase activity (20%) ATP binding (20%)" "IPR001412 (12.5%) IPR002302 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Leucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" DAKDQAGIDKIMIDLDGTENKSK root "4.2.1.11 (99.1%) 6.3.4.2 (0.9%)" "phosphopyruvate hydratase (99.1%) CTP synthase (glutamine hydrolyzing) (0.9%)" "GO:0006096 (16.7%) GO:0006396 (0.2%) GO:0006401 (0.2%)" "GO:0000015 (16.7%) GO:0005576 (16.3%) GO:0009986 (14.2%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.5%)" "glycolytic process (16.7%) RNA processing (0.2%) RNA catabolic process (0.2%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.3%) cell surface (14.2%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.5%)" "IPR000941 (17%) IPR020811 (17%) IPR029017 (17%)" "Enolase (17%) Enolase, N-terminal (17%) Enolase-like, N-terminal (17%)" SDGFNNVETLMLKR Escherichia coli Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli TGDPAEAFEAAQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (19.9%) "GO:0005737 (19.9%) GO:0015935 (19.9%) GO:0005840 (0.5%)" "GO:0003735 (19.9%) GO:0019843 (19.9%)" translation (19.9%) "cytoplasm (19.9%) small ribosomal subunit (19.9%) ribosome (0.5%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%)" "IPR001209 (33.3%) IPR018271 (33.3%) IPR023036 (33.3%)" "Small ribosomal subunit protein uS14 (33.3%) Small ribosomal subunit protein uS14, conserved site (33.3%) Small ribosomal subunit protein uS14, bacteria/plastid (33.3%)" HITFLDTPGHEAFTAMR root "GO:0005737 (22.5%) GO:0005829 (2.4%)" "GO:0003743 (24.9%) GO:0003924 (24.9%) GO:0005525 (24.9%)" "cytoplasm (22.5%) cytosol (2.4%)" "translation initiation factor activity (24.9%) GTPase activity (24.9%) GTP binding (24.9%)" "IPR000795 (8.8%) IPR005225 (8.8%) IPR006847 (8.8%)" "Translational (tr)-type GTP-binding domain (8.8%) Small GTP-binding domain (8.8%) Translation initiation factor IF-2, N-terminal (8.8%)" AVLNPATLVPFLVEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" LSGGVAVLYVGAASEVEMK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.4%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (15.5%) GO:1990220 (0.1%)" "GO:0005524 (17.4%) GO:0140662 (17.4%) GO:0016853 (16.4%)" "protein refolding (17.4%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (15.5%) GroEL-GroES complex (0.1%)" "ATP binding (17.4%) ATP-dependent protein folding chaperone (17.4%) isomerase activity (16.4%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR027409 (16.7%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like apical domain superfamily (16.7%)" FLEYQPWKGDIER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0009409 (10.1%) GO:0010467 (10.1%) GO:0000027 (9.4%)" "GO:0005829 (10.4%) GO:1990904 (10.4%)" "GO:0003924 (10.4%) GO:0005525 (10.4%) GO:0000049 (9.4%)" "response to cold (10.1%) gene expression (10.1%) ribosomal large subunit assembly (9.4%)" "cytosol (10.4%) ribonucleoprotein complex (10.4%)" "GTPase activity (10.4%) GTP binding (10.4%) tRNA binding (9.4%)" "IPR000640 (6.9%) IPR009000 (6.9%) IPR035647 (6.9%)" "Elongation factor EFG, domain V-like (6.9%) Translation protein, beta-barrel domain superfamily (6.9%) EF-G domain III/V-like (6.9%)" VPTPNVSVVDLTVRLEK root "1.2.1.12 (60.2%) 1.2.1.- (39.7%) 1.2.1.13 (0.1%)" "glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (60.2%) With NAD(+) or NADP(+) as acceptor (39.7%) glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) (0.1%)" "GO:0006006 (11.6%) GO:0006096 (8.1%) GO:0006915 (7%)" "GO:0005829 (7.8%) GO:0005856 (7%) GO:0005634 (7%)" "GO:0051287 (12.8%) GO:0004365 (12.5%) GO:0050661 (11.6%)" "glucose metabolic process (11.6%) glycolytic process (8.1%) apoptotic process (7%)" "cytosol (7.8%) cytoskeleton (7%) nucleus (7%)" "NAD binding (12.8%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (12.5%) NADP binding (11.6%)" "IPR020829 (17.9%) IPR020831 (17.9%) IPR036291 (16.5%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.9%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.9%) NAD(P)-binding domain superfamily (16.5%)" RGDYTFALDNDKKWDFKPLAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (22.4%) GO:0046034 (1.7%)" "GO:0005524 (24.1%) GO:0046961 (24.1%) GO:0046933 (22.4%)" "proton motive force-driven plasma membrane ATP synthesis (22.4%) ATP metabolic process (1.7%)" "ATP binding (24.1%) proton-transporting ATPase activity, rotational mechanism (24.1%) proton-transporting ATP synthase activity, rotational mechanism (22.4%)" "IPR000194 (14.7%) IPR022878 (14.7%) IPR027417 (14.7%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14.7%) V-type ATP synthase catalytic alpha chain (14.7%) P-loop containing nucleoside triphosphate hydrolase (14.7%)" EFDKLIVGAKDEFDRIFANR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" EVAPYLQAADSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006605 (20%) GO:0043952 (20%) GO:0065002 (20%)" GO:0005886 (20%) GO:0015450 (20%) "protein targeting (20%) protein transport by the Sec complex (20%) intracellular protein transmembrane transport (20%)" plasma membrane (20%) protein-transporting ATPase activity (20%) "IPR005665 (11.1%) IPR005791 (11.1%) IPR022645 (11.1%)" "Protein-export membrane protein SecF, bacterial (11.1%) Protein translocase subunit SecD (11.1%) Protein-export membrane protein SecD/SecF, bacterial (11.1%)" DIGAQYIIIGHSER root 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0019563 (16.6%)" "GO:0005829 (16.6%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0004807 (16.6%) GO:0016853 (0.2%) GO:0042802 (0%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) glycerol catabolic process (16.6%)" "cytosol (16.6%) cytoplasm (0%) membrane (0%)" "triose-phosphate isomerase activity (16.6%) isomerase activity (0.2%) identical protein binding (0%)" "IPR000652 (20.3%) IPR013785 (20.3%) IPR035990 (20.3%)" "Triosephosphate isomerase (20.3%) Aldolase-type TIM barrel (20.3%) Triosephosphate isomerase superfamily (20.3%)" ESASLDKYLQEIGREDLITVEEEVELAQAIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006352 (33.3%) "GO:0003677 (33.3%) GO:0016987 (33.3%)" DNA-templated transcription initiation (33.3%) "DNA binding (33.3%) sigma factor activity (33.3%)" "IPR000943 (10%) IPR007624 (10%) IPR007627 (10%)" "RNA polymerase sigma-70 (10%) RNA polymerase sigma-70 region 3 (10%) RNA polymerase sigma-70 region 2 (10%)" VAEQLVDTLIEAGVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.2.2 (66.7%) 1.2.5.1 (33.3%)" "Deleted entry (66.7%) pyruvate dehydrogenase (quinone) (33.3%)" GO:0019752 (25%) "GO:0000287 (25%) GO:0030976 (25%) GO:0003824 (21.6%)" carboxylic acid metabolic process (25%) "magnesium ion binding (25%) thiamine pyrophosphate binding (25%) catalytic activity (21.6%)" "IPR000399 (11.1%) IPR011766 (11.1%) IPR012000 (11.1%)" "TPP-binding enzyme, conserved site (11.1%) Thiamine pyrophosphate enzyme, TPP-binding (11.1%) Thiamine pyrophosphate enzyme, central domain (11.1%)" VGIGGGSICITR root 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (24.7%) GO:0006183 (24.7%) GO:0006166 (0.8%)" "GO:0003938 (24.7%) GO:0046872 (24.7%) GO:0004190 (0.1%)" "GMP biosynthetic process (24.7%) GTP biosynthetic process (24.7%) purine ribonucleoside salvage (0.8%)" "IMP dehydrogenase activity (24.7%) metal ion binding (24.7%) aspartic-type endopeptidase activity (0.1%)" "IPR001093 (16.7%) IPR005990 (16.7%) IPR013785 (16.7%)" "IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%) Aldolase-type TIM barrel (16.7%)" LAQAGVNVVSVPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (8.4%) GO:0030388 (8.4%) GO:0061621 (8.4%)" "GO:0005945 (8.4%) GO:0016020 (0.5%)" "GO:0003872 (8.4%) GO:0005524 (8.4%) GO:0016208 (8.4%)" "fructose 6-phosphate metabolic process (8.4%) fructose 1,6-bisphosphate metabolic process (8.4%) canonical glycolysis (8.4%)" "6-phosphofructokinase complex (8.4%) membrane (0.5%)" "6-phosphofructokinase activity (8.4%) ATP binding (8.4%) AMP binding (8.4%)" "IPR000023 (20.7%) IPR012003 (20.7%) IPR022953 (20.7%)" "Phosphofructokinase domain (20.7%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (20.7%) ATP-dependent 6-phosphofructokinase (20.7%)" VSDPKEVVELDQKLNVVILDFDDEKKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.7%) "GO:0022627 (24.2%) GO:0005840 (0.9%) GO:1990904 (0.5%)" "GO:0003729 (24.7%) GO:0003735 (24.7%) GO:0004654 (0.2%)" translation (24.7%) "cytosolic small ribosomal subunit (24.2%) ribosome (0.9%) ribonucleoprotein complex (0.5%)" "mRNA binding (24.7%) structural constituent of ribosome (24.7%) polyribonucleotide nucleotidyltransferase activity (0.2%)" "IPR003029 (24.9%) IPR012340 (24.9%) IPR035104 (24.9%)" "S1 domain (24.9%) Nucleic acid-binding, OB-fold (24.9%) Ribosomal protein S1-like (24.9%)" GLPLVLLTNYPSQTGQDLANR root 3.1.3.5 (100%) 5'-nucleotidase (100%) "GO:0006529 (0.1%) GO:0046050 (0.1%)" "GO:0005737 (33%) GO:0005829 (0.2%)" "GO:0046872 (33.1%) GO:0016791 (18.5%) GO:0008253 (14.5%)" "obsolete asparagine biosynthetic process (0.1%) UMP catabolic process (0.1%)" "cytoplasm (33%) cytosol (0.2%)" "metal ion binding (33.1%) phosphatase activity (18.5%) 5'-nucleotidase activity (14.5%)" "IPR006357 (33.3%) IPR036412 (33.3%) IPR023214 (33.2%)" "HAD-superfamily hydrolase, subfamily IIA (33.3%) HAD-like superfamily (33.3%) HAD superfamily (33.2%)" YGLGSKDTTPTQIK Bacteria Bacteria "1.2.7.1 (87.5%) 1.2.7.- (12.5%)" "pyruvate synthase (87.5%) With an iron-sulfur protein as acceptor (12.5%)" "GO:0006979 (16.7%) GO:0022900 (16.7%)" "GO:0005506 (16.7%) GO:0030976 (16.7%) GO:0051539 (16.7%)" "response to oxidative stress (16.7%) electron transport chain (16.7%)" "iron ion binding (16.7%) thiamine pyrophosphate binding (16.7%) 4 iron, 4 sulfur cluster binding (16.7%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" LHHGLVNSTPK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (33.3%) GO:0015934 (33.3%) GO:0003735 (33.3%) translation (33.3%) large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR005996 (33.3%) IPR016082 (33.3%) IPR036919 (33.3%)" "Large ribosomal subunit protein uL30, bacteria (33.3%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (33.3%) Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily (33.3%)" KLDGIDFLAQGTIYPDIVESGTK Bacteria Bacteria 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (32.8%) "GO:0003921 (32.8%) GO:0005524 (32.8%) GO:0016740 (1.5%)" cytosol (32.8%) "GMP synthase activity (32.8%) ATP binding (32.8%) transferase activity (1.5%)" "IPR001674 (16.7%) IPR014729 (16.7%) IPR017926 (16.7%)" "GMP synthase, C-terminal (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Glutamine amidotransferase (16.7%)" IVSAPSEGLFR Pseudomonadati Bacteria Pseudomonadati "2.2.1.1 (98.3%) 2.2.1.- (1.7%)" "transketolase (98.3%) Transketolases and transaldolases (1.7%)" GO:0006098 (25%) "GO:0005829 (25%) GO:0016020 (0.1%)" "GO:0004802 (25%) GO:0046872 (24.7%) GO:0047896 (0.3%)" pentose-phosphate shunt (25%) "cytosol (25%) membrane (0.1%)" "transketolase activity (25%) metal ion binding (24.7%) formaldehyde transketolase activity (0.3%)" "IPR009014 (12.8%) IPR033247 (12.8%) IPR055152 (12.8%)" "Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.8%) Transketolase family (12.8%) Transketolase-like, C-terminal domain (12.8%)" EACKIDNELFPMYNVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (25%) "GO:0036440 (14.7%) GO:0046912 (10.3%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (25%) "citrate synthase activity (14.7%) acyltransferase activity, acyl groups converted into alkyl on transfer (10.3%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" TVAVTGSEVVKPAYCK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (25%) IPR022615 (25%) IPR056147 (25%)" "Na(+)-translocating NADH-quinone reductase subunit A (25%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (25%) NqrA, N-terminal barrel-sandwich hybrid domain (25%)" YWLVDPLDGTKEFIKR root "3.1.3.7 (98.9%) 3.1.3.57 (1.1%)" "3'(2'),5'-bisphosphate nucleotidase (98.9%) inositol-1,4-bisphosphate 1-phosphatase (1.1%)" "GO:0000103 (17%) GO:0050427 (17%) GO:0046854 (14%)" GO:0005886 (17.2%) "GO:0008441 (17.2%) GO:0000287 (17%) GO:0046872 (0.2%)" "sulfate assimilation (17%) 3'-phosphoadenosine 5'-phosphosulfate metabolic process (17%) phosphatidylinositol phosphate biosynthetic process (14%)" plasma membrane (17.2%) "3'(2'),5'-bisphosphate nucleotidase activity (17.2%) magnesium ion binding (17%) metal ion binding (0.2%)" "IPR000760 (20.8%) IPR020583 (20.8%) IPR050725 (20.8%)" "Inositol monophosphatase-like (20.8%) Inositol monophosphatase, metal-binding site (20.8%) CysQ/Inositol Monophosphatase (20.8%)" CYGADDVREGVAIMWK Bacteria Bacteria IPR025964 (100%) GGGtGRT protein (100%) ISSMNLLVSSHVWR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae "4.1.2.- (57.5%) 4.1.2.22 (25%) 4.1.2.9 (17.5%)" "Aldehyde-lyases (57.5%) fructose-6-phosphate phosphoketolase (25%) phosphoketolase (17.5%)" GO:0005975 (32.5%) "GO:0000287 (32.5%) GO:0016832 (28%) GO:0047905 (4.1%)" carbohydrate metabolic process (32.5%) "magnesium ion binding (32.5%) aldehyde-lyase activity (28%) fructose-6-phosphate phosphoketolase activity (4.1%)" "IPR005593 (17%) IPR029061 (17%) IPR009014 (12.3%)" "Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase (17%) Thiamin diphosphate-binding fold (17%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.3%)" VGDIVVSDEAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "3.2.2.9 (95.4%) 3.2.2.16 (4.6%)" "adenosylhomocysteine nucleosidase (95.4%) methylthioadenosine nucleosidase (4.6%)" "GO:0019284 (16.6%) GO:0019509 (16.6%) GO:0046124 (16.1%)" "GO:0005829 (16.6%) GO:0016020 (0%)" "GO:0008782 (16.6%) GO:0008930 (16.6%) GO:0016798 (0.2%)" "L-methionine salvage from S-adenosylmethionine (16.6%) L-methionine salvage from methylthioadenosine (16.6%) purine deoxyribonucleoside catabolic process (16.1%)" "cytosol (16.6%) membrane (0%)" "adenosylhomocysteine nucleosidase activity (16.6%) methylthioadenosine nucleosidase activity (16.6%) hydrolase activity, acting on glycosyl bonds (0.2%)" "IPR000845 (33.4%) IPR010049 (33.4%) IPR035994 (33.2%)" "Nucleoside phosphorylase domain (33.4%) MTA/SAH nucleosidase (33.4%) Nucleoside phosphorylase superfamily (33.2%)" FQQTMVLPDNVEKDKIEAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" QANAEIPIIFLTAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (18.8%) IPR001867 (18.8%) IPR011006 (18.8%)" "Signal transduction response regulator, receiver domain (18.8%) OmpR/PhoB-type DNA-binding domain (18.8%) CheY-like superfamily (18.8%)" SEKLQVVTLLGSLR root "1.6.5.2 (96.4%) 1.6.-.- (2.7%) 1.7.1.6 (0.9%)" "NAD(P)H dehydrogenase (quinone) (96.4%) Acting on NADH or NADPH (2.7%) azobenzene reductase (0.9%)" "GO:0006805 (0.3%) GO:0051289 (0.3%)" GO:0005829 (31.4%) "GO:0010181 (31.4%) GO:0016491 (27.2%) GO:0050446 (5%)" "xenobiotic metabolic process (0.3%) protein homotetramerization (0.3%)" cytosol (31.4%) "FMN binding (31.4%) oxidoreductase activity (27.2%) azobenzene reductase (NADP+) activity (5%)" "IPR005025 (33.7%) IPR029039 (33.7%) IPR050712 (32.5%)" "NADPH-dependent FMN reductase-like domain (33.7%) Flavoprotein-like superfamily (33.7%) NAD(P)H-dependent reductase (32.5%)" KRFPNIDIVVGNIATGEAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20.2%) GO:0006183 (20.2%)" "GO:0003938 (20.2%) GO:0046872 (20.2%) GO:0000166 (19.3%)" "GMP biosynthetic process (20.2%) GTP biosynthetic process (20.2%)" "IMP dehydrogenase activity (20.2%) metal ion binding (20.2%) nucleotide binding (19.3%)" "IPR001093 (16.8%) IPR005990 (16.8%) IPR013785 (16.8%)" "IMP dehydrogenase/GMP reductase (16.8%) Inosine-5'-monophosphate dehydrogenase (16.8%) Aldolase-type TIM barrel (16.8%)" MLEGTPQMLITSLDYSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0000027 (10%) GO:0009409 (10%) GO:0010467 (10%)" "GO:0005829 (10%) GO:1990904 (10%)" "GO:0000049 (10%) GO:0003924 (10%) GO:0005525 (10%)" "ribosomal large subunit assembly (10%) response to cold (10%) gene expression (10%)" "cytosol (10%) ribonucleoprotein complex (10%)" "tRNA binding (10%) GTPase activity (10%) GTP binding (10%)" "IPR000640 (6.7%) IPR000795 (6.7%) IPR004161 (6.7%)" "Elongation factor EFG, domain V-like (6.7%) Translational (tr)-type GTP-binding domain (6.7%) Translation elongation factor EFTu-like, domain 2 (6.7%)" LFVVDTFCGANEGTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.5%) GO:0005829 (17.5%) "GO:0004612 (17.5%) GO:0005524 (17.5%) GO:0046872 (17.5%)" gluconeogenesis (17.5%) cytosol (17.5%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.5%) ATP binding (17.5%) metal ion binding (17.5%)" "IPR001272 (25.7%) IPR008210 (25.7%) IPR013035 (24.3%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.7%) Phosphoenolpyruvate carboxykinase, N-terminal (25.7%) Phosphoenolpyruvate carboxykinase, C-terminal (24.3%)" QLTPHPWDALDPNLQVGDKVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" IAGAAASANTEPER Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0051301 (48.1%) "GO:0005737 (48.1%) GO:0005856 (1.9%)" GO:0005200 (1.9%) cell division (48.1%) "cytoplasm (48.1%) cytoskeleton (1.9%)" structural constituent of cytoskeleton (1.9%) "IPR007793 (50%) IPR019933 (50%)" "DivIVA family (50%) DivIVA domain (50%)" LNWDSLAALLYNHPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0019441 (50%) GO:0004061 (50%) L-tryptophan catabolic process to kynurenine (50%) arylformamidase activity (50%) IPR037175 (100%) Kynurenine formamidase superfamily (100%) AILPNEETIYHAAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (25.9%) GO:0003863 (7.4%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (25.9%) branched-chain 2-oxo acid dehydrogenase activity (7.4%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" LFQMHSNKQNPMETIGCGDIGAGVGFK Parabacteroides merdae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides merdae GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" ELSNLQIGQANVILQVLDKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (59.1%) "GO:0016853 (36.4%) GO:0003755 (4.5%)" plasma membrane (59.1%) "isomerase activity (36.4%) peptidyl-prolyl cis-trans isomerase activity (4.5%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" LLYAYGEATVPK Bacteria Bacteria "6.4.1.3 (66.3%) 6.-.-.- (27.2%) 2.1.3.15 (3.3%)" "propionyl-CoA carboxylase (66.3%) Ligases (27.2%) acetyl-CoA carboxytransferase (3.3%)" "GO:0015977 (21.8%) GO:0006633 (1.6%) GO:0006629 (0%)" "GO:0009317 (22.2%) GO:0016020 (0.4%) GO:0005886 (0%)" "GO:0004658 (23.3%) GO:0003989 (21.8%) GO:0016740 (8.2%)" "carbon fixation (21.8%) fatty acid biosynthetic process (1.6%) lipid metabolic process (0%)" "acetyl-CoA carboxylase complex (22.2%) membrane (0.4%) plasma membrane (0%)" "propionyl-CoA carboxylase activity (23.3%) acetyl-CoA carboxylase activity (21.8%) transferase activity (8.2%)" "IPR034733 (19.8%) IPR011763 (19.8%) IPR051047 (19.8%)" "Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (19.8%) Acetyl-coenzyme A carboxyltransferase, C-terminal (19.8%) Acyl-CoA Carboxylase Beta Subunit (19.8%)" KNEFENVMRDYEHLGLNVIGVNAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (12.5%) IPR004739 (12.5%) IPR014729 (12.5%)" "GMP synthase, C-terminal (12.5%) GMP synthase, glutamine amidotransferase (12.5%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" LNCEVIAADATNVEDLENVFKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" QDLNDPNQQAAAQQDTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (0.8%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (0.8%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" TAEDYLGQEVTEAVITVPAYFSDSQR Bacteria Bacteria "GO:0042026 (0.2%) GO:0051085 (0.2%)" GO:0005737 (2%) "GO:0005524 (32.5%) GO:0140662 (32.5%) GO:0051082 (32.2%)" "protein refolding (0.2%) obsolete chaperone cofactor-dependent protein refolding (0.2%)" cytoplasm (2%) "ATP binding (32.5%) ATP-dependent protein folding chaperone (32.5%) unfolded protein binding (32.2%)" "IPR013126 (16.8%) IPR018181 (16.8%) IPR043129 (16.8%)" "Heat shock protein 70 family (16.8%) Heat shock protein 70, conserved site (16.8%) ATPase, nucleotide binding domain (16.8%)" LVQNVNVVNSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) SVGDVIVVSVK root GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.1%)" "GO:0003735 (24.9%) GO:0070180 (24.9%) GO:0016740 (0.1%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.1%)" "structural constituent of ribosome (24.9%) large ribosomal subunit rRNA binding (24.9%) transferase activity (0.1%)" "IPR000218 (25.1%) IPR005745 (25.1%) IPR019972 (24.9%)" "Large ribosomal subunit protein uL14 (25.1%) Large ribosomal subunit protein uL14, bacteria (25.1%) Large ribosomal subunit protein uL14, conserved site (24.9%)" YLPTSQLAELER Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola YVDKATGFISYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" NCGVQVIGCPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.4%) GO:0009749 (14.4%)" GO:0005829 (14.4%) "GO:0003872 (14.4%) GO:0046872 (14.4%) GO:0005524 (14%)" "fructose 6-phosphate metabolic process (14.4%) response to glucose (14.4%)" cytosol (14.4%) "6-phosphofructokinase activity (14.4%) metal ion binding (14.4%) ATP binding (14%)" "IPR000023 (25.2%) IPR022953 (25.2%) IPR035966 (25.2%)" "Phosphofructokinase domain (25.2%) ATP-dependent 6-phosphofructokinase (25.2%) Phosphofructokinase superfamily (25.2%)" GMAENPDHFFQHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (73.1%) 1.2.7.- (23.1%) 1.2.1.51 (3.8%)" "pyruvate synthase (73.1%) With an iron-sulfur protein as acceptor (23.1%) pyruvate dehydrogenase (NADP(+)) (3.8%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (12%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.4%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (12%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.4%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" MTIDKFNFAGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" MAELPVEMFEEAVRK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (17.4%) GO:0009098 (17.4%) GO:0009099 (17.4%)" "GO:0004084 (23.9%) GO:0052654 (2.2%) GO:0052655 (2.2%)" "isoleucine biosynthetic process (17.4%) L-leucine biosynthetic process (17.4%) L-valine biosynthetic process (17.4%)" "branched-chain-amino-acid transaminase activity (23.9%) L-leucine-2-oxoglutarate transaminase activity (2.2%) L-valine-2-oxoglutarate transaminase activity (2.2%)" "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" QYVASHPGEVCPAK root "1.11.1.26 (95.7%) 1.11.1.15 (2.6%) 1.11.1.24 (1.5%)" "NADH-dependent peroxiredoxin (95.7%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (2.6%) thioredoxin-dependent peroxiredoxin (1.5%)" "GO:0006979 (14.8%) GO:0042744 (14.8%) GO:0045454 (14.8%)" "GO:0005829 (14.8%) GO:0005737 (0%) GO:0009321 (0%)" "GO:0008379 (14.8%) GO:0102039 (10.6%) GO:0004601 (0.1%)" "response to oxidative stress (14.8%) hydrogen peroxide catabolic process (14.8%) cell redox homeostasis (14.8%)" "cytosol (14.8%) cytoplasm (0%) alkyl hydroperoxide reductase complex (0%)" "thioredoxin peroxidase activity (14.8%) NADH-dependent peroxiredoxin activity (10.6%) peroxidase activity (0.1%)" "IPR019479 (14.5%) IPR036249 (14.5%) IPR050217 (14.4%)" "Peroxiredoxin, C-terminal (14.5%) Thioredoxin-like superfamily (14.5%) Thiol-specific antioxidant peroxiredoxin (14.4%)" KSYGGAYCVMSSK root "6.4.1.3 (94.3%) 2.1.3.1 (2.9%) 6.-.-.- (2.9%)" "propionyl-CoA carboxylase (94.3%) methylmalonyl-CoA carboxytransferase (2.9%) Ligases (2.9%)" "GO:0015977 (11.8%) GO:0009062 (9.2%) GO:0006633 (1.8%)" "GO:0009317 (13.3%) GO:0005739 (12.5%) GO:0016020 (0.4%)" "GO:0004658 (29.5%) GO:0003989 (13.3%) GO:0016740 (7.7%)" "carbon fixation (11.8%) fatty acid catabolic process (9.2%) fatty acid biosynthetic process (1.8%)" "acetyl-CoA carboxylase complex (13.3%) mitochondrion (12.5%) membrane (0.4%)" "propionyl-CoA carboxylase activity (29.5%) acetyl-CoA carboxylase activity (13.3%) transferase activity (7.7%)" "IPR011763 (20.1%) IPR029045 (20.1%) IPR034733 (20.1%)" "Acetyl-coenzyme A carboxyltransferase, C-terminal (20.1%) ClpP/crotonase-like domain superfamily (20.1%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.1%)" SEEIKNTSTEYSADSIQVLEGLEAVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006261 (12.5%) GO:0006265 (12.5%)" "GO:0005694 (12.5%) GO:0005737 (12.5%)" "GO:0003677 (12.5%) GO:0005524 (12.5%) GO:0034335 (12.5%)" "DNA-templated DNA replication (12.5%) DNA topological change (12.5%)" "chromosome (12.5%) cytoplasm (12.5%)" "DNA binding (12.5%) ATP binding (12.5%) DNA negative supercoiling activity (12.5%)" "IPR000565 (7.4%) IPR001241 (7.4%) IPR002288 (7.4%)" "DNA topoisomerase, type IIA, subunit B (7.4%) DNA topoisomerase, type IIA (7.4%) DNA gyrase B subunit, C-terminal (7.4%)" TLRENGTYNEIYKK root "GO:0006865 (23.5%) GO:0006868 (0.1%) GO:1903803 (0.1%)" "GO:0016020 (25.2%) GO:0030288 (24.7%) GO:0042597 (0.7%)" "GO:0015276 (25.3%) GO:0016597 (0.1%) GO:0016787 (0.1%)" "amino acid transport (23.5%) glutamine transport (0.1%) L-glutamine import across plasma membrane (0.1%)" "membrane (25.2%) outer membrane-bounded periplasmic space (24.7%) periplasmic space (0.7%)" "ligand-gated monoatomic ion channel activity (25.3%) amino acid binding (0.1%) hydrolase activity (0.1%)" "IPR001638 (25.6%) IPR001320 (25%) IPR044132 (24.8%)" "Solute-binding protein family 3/N-terminal domain of MltF (25.6%) Ionotropic glutamate receptor, C-terminal (25%) Glutamine-binding periplasmic protein GlnH, type 2 periplasmic binding protein fold (24.8%)" VVMDGLTFDDVLLIPAYSEVLPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" WTADAQKNELIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (14.3%) GO:0006508 (14.3%)" GO:0000428 (14.3%) "GO:0003677 (14.3%) GO:0003899 (14.3%) GO:0004190 (14.3%)" "DNA-templated transcription (14.3%) proteolysis (14.3%)" DNA-directed RNA polymerase complex (14.3%) "DNA binding (14.3%) DNA-directed RNA polymerase activity (14.3%) aspartic-type endopeptidase activity (14.3%)" "IPR001969 (7.1%) IPR007120 (7.1%) IPR007121 (7.1%)" "Aspartic peptidase, active site (7.1%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.1%) RNA polymerase, beta subunit, conserved site (7.1%)" LSTYNKIEDLPEDVLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "6.3.5.5 (93.3%) 6.3.4.16 (6.7%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (93.3%) carbamoyl-phosphate synthase (ammonia) (6.7%)" "GO:0006221 (13.3%) GO:0006526 (13.3%) GO:0006541 (13.3%)" GO:0005737 (13.3%) "GO:0004088 (13.3%) GO:0005524 (13.3%) GO:0046872 (13.3%)" "pyrimidine nucleotide biosynthetic process (13.3%) L-arginine biosynthetic process (13.3%) glutamine metabolic process (13.3%)" cytoplasm (13.3%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.3%) ATP binding (13.3%) metal ion binding (13.3%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" KTHNQGVFDVYTPDIIR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (30.7%) GO:0005975 (0%) GO:0044814 (0%)" "GO:0005829 (32.1%) GO:0016020 (0%)" "GO:0008861 (32.1%) GO:0016829 (4.6%) GO:0016746 (0.4%)" "glucose metabolic process (30.7%) carbohydrate metabolic process (0%) pyruvate fermentation via PFL (0%)" "cytosol (32.1%) membrane (0%)" "formate C-acetyltransferase activity (32.1%) lyase activity (4.6%) acyltransferase activity (0.4%)" "IPR004184 (20.6%) IPR050244 (20.6%) IPR005949 (19.7%)" "Pyruvate formate lyase domain (20.6%) Autonomous Glycyl Radical Cofactor (20.6%) Formate acetyltransferase (19.7%)" LLFRPGGHGALIENLNDVDADVVFIK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" VEYGEAAFYGPK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.3 (100%) threonine--tRNA ligase (100%) "GO:0006435 (16.5%) GO:0043039 (0%)" GO:0005737 (16.5%) "GO:0004829 (16.5%) GO:0005524 (16.5%) GO:0046872 (16.5%)" "threonyl-tRNA aminoacylation (16.5%) tRNA aminoacylation (0%)" cytoplasm (16.5%) "threonine-tRNA ligase activity (16.5%) ATP binding (16.5%) metal ion binding (16.5%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR006195 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) Aminoacyl-tRNA synthetase, class II (7.7%)" WSCDGTPEYSLEETTKEDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005524 (24.5%) GO:0016887 (24.5%) GO:0051082 (24.5%)" "ATP binding (24.5%) ATP hydrolysis activity (24.5%) unfolded protein binding (24.5%)" "IPR001404 (14.3%) IPR003594 (14.3%) IPR019805 (14.3%)" "Heat shock protein Hsp90 family (14.3%) Histidine kinase/HSP90-like ATPase domain (14.3%) Heat shock protein Hsp90, conserved site (14.3%)" VKQLSIADMFAETIKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11%) GO:0006164 (11%) GO:0009156 (11%)" "GO:0002189 (11%) GO:0005737 (11%)" "GO:0000287 (11.2%) GO:0004749 (11.2%) GO:0016301 (11.2%)" "5-phosphoribose 1-diphosphate biosynthetic process (11%) purine nucleotide biosynthetic process (11%) ribonucleoside monophosphate biosynthetic process (11%)" "ribose phosphate diphosphokinase complex (11%) cytoplasm (11%)" "magnesium ion binding (11.2%) ribose phosphate diphosphokinase activity (11.2%) kinase activity (11.2%)" "IPR005946 (20.1%) IPR029057 (20.1%) IPR000836 (19.9%)" "Ribose-phosphate pyrophosphokinase (20.1%) Phosphoribosyltransferase-like (20.1%) Phosphoribosyltransferase domain (19.9%)" AVLESVGVTDVLAK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006412 (16.8%) GO:0042254 (15.9%)" "GO:0015935 (16.6%) GO:0005737 (16.4%) GO:0005840 (0.5%)" "GO:0003735 (16.8%) GO:0019843 (16.6%) GO:0003723 (0.1%)" "translation (16.8%) ribosome biogenesis (15.9%)" "small ribosomal subunit (16.6%) cytoplasm (16.4%) ribosome (0.5%)" "structural constituent of ribosome (16.8%) rRNA binding (16.6%) RNA binding (0.1%)" "IPR005324 (14.4%) IPR014721 (14.4%) IPR020568 (14.4%)" "Small ribosomal subunit protein uS5, C-terminal (14.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (14.4%) Ribosomal protein uS5 domain 2-type superfamily (14.4%)" GQEADFQTGLNALAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (20%) IPR011053 (20%) IPR022615 (20%)" "Na(+)-translocating NADH-quinone reductase subunit A (20%) Single hybrid motif (20%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (20%)" YSYVDENGETKTWTGQGR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0045892 (0%) GO:0006355 (0%) GO:0006417 (0%)" "GO:0005829 (11%) GO:0032993 (11%) GO:0009295 (11%)" "GO:0000976 (11%) GO:0001217 (11%) GO:0003680 (11%)" "negative regulation of DNA-templated transcription (0%) regulation of DNA-templated transcription (0%) regulation of translation (0%)" "cytosol (11%) protein-DNA complex (11%) nucleoid (11%)" "transcription cis-regulatory region binding (11%) DNA-binding transcription repressor activity (11%) minor groove of adenine-thymine-rich DNA binding (11%)" "IPR027444 (20.1%) IPR037150 (20.1%) IPR001801 (19.9%)" "DNA-binding protein H-NS-like, C-terminal domain (20.1%) Histone-like protein H-NS, C-terminal domain superfamily (20.1%) DNA-binding protein H-NS-like (19.9%)" SAAAVHKTNEALK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25%) GO:0006099 (25%)" "GO:0004459 (25%) GO:0030060 (25%)" "lactate metabolic process (25%) tricarboxylic acid cycle (25%)" "L-lactate dehydrogenase (NAD+) activity (25%) L-malate dehydrogenase (NAD+) activity (25%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR011275 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 3 (16.7%)" GAPDVFEQFNTAVQK Bacteria Bacteria "GO:0006524 (20%) GO:0043201 (20%) GO:0006355 (19.6%)" "GO:0005829 (20%) GO:0032993 (0.1%)" "GO:0043565 (20%) GO:0000976 (0.1%) GO:0001216 (0.1%)" "alanine catabolic process (20%) response to L-leucine (20%) regulation of DNA-templated transcription (19.6%)" "cytosol (20%) protein-DNA complex (0.1%)" "sequence-specific DNA binding (20%) transcription cis-regulatory region binding (0.1%) DNA-binding transcription activator activity (0.1%)" "IPR011008 (12.7%) IPR019887 (12.7%) IPR019888 (12.6%)" "Dimeric alpha-beta barrel (12.7%) Transcription regulator AsnC/Lrp, ligand binding domain (12.7%) Transcription regulator AsnC-like (12.6%)" ADISEEDYMRAEYVIEEIQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" IGAVVIPATHLLTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.2.1.1 (100%) acetate--CoA ligase (100%) "GO:0006633 (16.2%) GO:0006637 (16.2%)" GO:0016020 (3.1%) "GO:0004321 (16.2%) GO:0015645 (16.2%) GO:0005524 (16%)" "fatty acid biosynthetic process (16.2%) acyl-CoA metabolic process (16.2%)" membrane (3.1%) "fatty-acyl-CoA synthase activity (16.2%) fatty acid ligase activity (16.2%) ATP binding (16%)" "IPR000873 (16.7%) IPR051087 (16.7%) IPR020845 (16.7%)" "AMP-dependent synthetase/ligase domain (16.7%) Mitochondrial Acyl-CoA Synthetase Medium-Chain (16.7%) AMP-binding, conserved site (16.7%)" VKEADLQQVMEDYGTVTSCK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0003723 (100%) RNA binding (100%) "IPR000504 (20%) IPR012677 (20%) IPR035979 (20%)" "RNA recognition motif domain (20%) Nucleotide-binding alpha-beta plait domain superfamily (20%) RNA-binding domain superfamily (20%)" AHFPSATLLPGDEYQQVTIYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.1.3.3 (95.5%) 5.1.3.- (4.5%)" "aldose 1-epimerase (95.5%) Acting on carbohydrates and derivatives (4.5%)" "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (20%) IPR011013 (20%) IPR014718 (20%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (20%) Galactose mutarotase-like domain superfamily (20%) Glycoside hydrolase-type carbohydrate-binding (20%)" HASTAVIADYFDADNKMLGYLMEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%)" GO:0005829 (16.5%) "GO:0004618 (16.5%) GO:0005524 (16.5%) GO:0043531 (16.5%)" "gluconeogenesis (16.5%) glycolytic process (16.5%)" cytosol (16.5%) "phosphoglycerate kinase activity (16.5%) ATP binding (16.5%) ADP binding (16.5%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" VSVIFDKPTDADKLHLKEVTTK Streptococcus Bacteria Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus "GO:0005576 (50%) GO:0016020 (50%)" "extracellular region (50%) membrane (50%)" "IPR019931 (17.5%) IPR031792 (15.9%) IPR038183 (15.9%)" "LPXTG cell wall anchor domain (17.5%) Surface antigen, GAG-binding domain (15.9%) RICH domain superfamily (15.9%)" NKDFVLEADRIEFKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR025347 (100%) Protein of unknown function DUF4251 (100%) DTATSHDRIFFVEVMGR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0046872 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) metal ion binding (9.1%)" "IPR000023 (16.9%) IPR022953 (16.8%) IPR035966 (16.8%)" "Phosphofructokinase domain (16.9%) ATP-dependent 6-phosphofructokinase (16.8%) Phosphofructokinase superfamily (16.8%)" NIPDYPEEVDLMR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.2.7.8 (100%) indolepyruvate ferredoxin oxidoreductase (100%) "GO:0016903 (88.9%) GO:0043805 (11.1%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (88.9%) indolepyruvate ferredoxin oxidoreductase activity (11.1%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052198 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) Indolepyruvate oxidoreductase subunit IorB-like (33.3%)" IQELDAAVTGLTADKESLAAENEAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides TKESLTTALAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (16.7%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (16.7%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" SDIGGVALNIR Bacteria Bacteria "2.3.1.- (50%) 6.2.1.5 (50%)" "Transferring groups other than amino-acyl groups (50%) succinate--CoA ligase (ADP-forming) (50%)" GO:0006099 (12.3%) "GO:0005524 (35.6%) GO:0003824 (16.4%) GO:0016874 (16.4%)" tricarboxylic acid cycle (12.3%) "ATP binding (35.6%) catalytic activity (16.4%) ligase activity (16.4%)" "IPR013815 (17.7%) IPR003781 (17%) IPR016102 (17%)" "ATP-grasp fold, subdomain 1 (17.7%) CoA-binding (17%) Succinyl-CoA synthetase-like (17%)" NAGFQVPEINMK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.3.1 (66.7%) 6.4.1.1 (33.3%)" "methylmalonyl-CoA carboxytransferase (66.7%) pyruvate carboxylase (33.3%)" GO:0006094 (31.3%) GO:0005737 (31.3%) "GO:0004736 (31.3%) GO:0003824 (3.1%) GO:0047154 (3.1%)" gluconeogenesis (31.3%) cytoplasm (31.3%) "pyruvate carboxylase activity (31.3%) catalytic activity (3.1%) methylmalonyl-CoA carboxytransferase activity (3.1%)" "IPR000891 (25%) IPR003379 (25%) IPR013785 (25%)" "Pyruvate carboxyltransferase (25%) Carboxylase, conserved domain (25%) Aldolase-type TIM barrel (25%)" LLQTEAGFAQSPLVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.7.1.168 (33.3%) 2.7.1.52 (33.3%) 2.7.7.30 (33.3%)" "D-glycero-alpha-D-manno-heptose-7-phosphate kinase (33.3%) fucokinase (33.3%) fucose-1-phosphate guanylyltransferase (33.3%)" GO:0042352 (29%) "GO:0005524 (29%) GO:0050201 (29%) GO:0016779 (12%)" GDP-L-fucose salvage (29%) "ATP binding (29%) fucokinase activity (29%) nucleotidyltransferase activity (12%)" "IPR001174 (14.3%) IPR006204 (14.3%) IPR012887 (14.3%)" "HddA/FKP (14.3%) GHMP kinase N-terminal domain (14.3%) GDP-fucose pyrophosphorylase domain (14.3%)" MIAPILDEIADEYQGK root 1.8.1.10 (100%) CoA-glutathione reductase (100%) "GO:0045454 (33%) GO:0006353 (0.1%)" "GO:0005829 (33%) GO:0005737 (0.1%)" "GO:0015035 (33.2%) GO:0003723 (0.1%) GO:0004386 (0.1%)" "cell redox homeostasis (33%) DNA-templated transcription termination (0.1%)" "cytosol (33%) cytoplasm (0.1%)" "protein-disulfide reductase activity (33.2%) RNA binding (0.1%) helicase activity (0.1%)" "IPR013766 (24.9%) IPR036249 (24.9%) IPR005746 (24.8%)" "Thioredoxin domain (24.9%) Thioredoxin-like superfamily (24.9%) Thioredoxin (24.8%)" NKNPLILLESCDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0002181 (25%) "GO:0022625 (25%) GO:0005840 (0.2%)" "GO:0003735 (25%) GO:0019843 (25%)" cytoplasmic translation (25%) "cytosolic large ribosomal subunit (25%) ribosome (0.2%)" "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000702 (20%) IPR019906 (20%) IPR020040 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, bacteria (20%) Large ribosomal subunit protein uL6, alpha-beta domain (20%)" NAEIPIIFLTAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0006355 (20%) GO:0000160 (0.1%)" "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" "regulation of DNA-templated transcription (20%) phosphorelay signal transduction system (0.1%)" "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (17.5%) IPR011006 (17.5%) IPR039420 (17.5%)" "Signal transduction response regulator, receiver domain (17.5%) CheY-like superfamily (17.5%) Transcriptional regulatory protein WalR-like (17.5%)" TVAMDSTDGLQR Bacteria Bacteria "7.1.2.2 (99.3%) 3.6.3.14 (0.7%)" "H(+)-transporting two-sector ATPase (99.3%) Transferred entry: 7.1.2.2 (0.7%)" "GO:0045259 (22.9%) GO:0005886 (22.1%)" "GO:0005524 (22.9%) GO:0046933 (22.9%) GO:0016787 (8.4%)" "proton-transporting ATP synthase complex (22.9%) plasma membrane (22.1%)" "ATP binding (22.9%) proton-transporting ATP synthase activity, rotational mechanism (22.9%) hydrolase activity (8.4%)" "IPR004100 (10.2%) IPR050053 (10.2%) IPR036121 (10.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.2%) ATPase alpha/beta chains (10.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily (10.1%)" DKEINSMNRPVNYER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.7%) IPR006101 (7.7%) IPR006102 (7.7%)" "Beta galactosidase small chain/ domain 5 (7.7%) Glycoside hydrolase, family 2 (7.7%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.7%)" AAEQGFIDEVIQPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (22.2%) GO:0009317 (22.2%) "GO:0003989 (22.2%) GO:0004658 (22.2%) GO:0016740 (11.1%)" carbon fixation (22.2%) acetyl-CoA carboxylase complex (22.2%) "acetyl-CoA carboxylase activity (22.2%) propionyl-CoA carboxylase activity (22.2%) transferase activity (11.1%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" ECITSMVSR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 1.1.1.8 (100%) glycerol-3-phosphate dehydrogenase (NAD(+)) (100%) "GO:0015031 (20.3%) GO:0051262 (20.3%) GO:0006457 (18.3%)" "GO:0005737 (18.7%) GO:0005829 (0.2%)" "GO:0051082 (20.3%) GO:0051287 (0.2%) GO:0070678 (0.2%)" "protein transport (20.3%) protein tetramerization (20.3%) protein folding (18.3%)" "cytoplasm (18.7%) cytosol (0.2%)" "unfolded protein binding (20.3%) NAD binding (0.2%) preprotein binding (0.2%)" "IPR003708 (49.5%) IPR035958 (49.5%) IPR011128 (0.5%)" "Bacterial protein export chaperone SecB (49.5%) SecB-like superfamily (49.5%) Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal (0.5%)" IDASEGIAEIPQNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales TGANTGDEDDKNLDNVNFNMEIFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.7.1.- (33.3%) 2.7.1.162 (33.3%) 3.1.6.- (33.3%)" "Phosphotransferases with an alcohol group as acceptor (33.3%) N-acetylhexosamine 1-kinase (33.3%) Sulfuric ester hydrolases (33.3%)" "GO:0016740 (91.7%) GO:0016301 (8.3%)" "transferase activity (91.7%) kinase activity (8.3%)" "IPR002575 (33.3%) IPR011009 (33.3%) IPR050249 (33.3%)" "Aminoglycoside phosphotransferase (33.3%) Protein kinase-like domain superfamily (33.3%) Pseudomonas-type Homoserine Kinase (33.3%)" LGGIVPDPDEVITALKEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.3 (33.3%) 1.2.7.7 (33.3%) 1.2.-.- (16.7%)" "2-oxoglutarate synthase (33.3%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) (33.3%) Acting on the aldehyde or oxo group of donors (16.7%)" "GO:0016491 (66.7%) GO:0043807 (16.7%) GO:0019164 (8.3%)" "oxidoreductase activity (66.7%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity (16.7%) pyruvate synthase activity (8.3%)" "IPR002880 (20%) IPR009014 (20%) IPR029061 (20%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%) Thiamin diphosphate-binding fold (20%)" QLTDEQLREAGVAPDLIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.5.1.49 (50%) 4.4.1.11 (33.3%) 2.5.1.48 (16.7%)" "O-acetylhomoserine aminocarboxypropyltransferase (50%) methionine gamma-lyase (33.3%) cystathionine gamma-synthase (16.7%)" "GO:0006535 (13.7%) GO:0019346 (13.7%) GO:0071269 (13.7%)" GO:0005737 (13.7%) "GO:0003961 (13.7%) GO:0004124 (13.7%) GO:0030170 (13.7%)" "cysteine biosynthetic process from serine (13.7%) transsulfuration (13.7%) L-homocysteine biosynthetic process (13.7%)" cytoplasm (13.7%) "O-acetylhomoserine aminocarboxypropyltransferase activity (13.7%) cysteine synthase activity (13.7%) pyridoxal phosphate binding (13.7%)" "IPR000277 (20%) IPR006235 (20%) IPR015421 (20%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (20%) O-acetylhomoserine/O-acetylserine sulfhydrylase (20%) Pyridoxal phosphate-dependent transferase, major domain (20%)" NNAGITYYDPDKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR015943 (53.8%) IPR031815 (46.2%)" "WD40/YVTN repeat-like-containing domain superfamily (53.8%) Protein of unknown function DUF5074 (46.2%)" YGIPQISTGDMLR root "2.7.4.3 (99.9%) 2.7.4.- (0.1%)" "adenylate kinase (99.9%) Phosphotransferases with a phosphate group as acceptor (0.1%)" "GO:0044209 (22.6%) GO:0009123 (0.1%) GO:0009132 (0.1%)" "GO:0005737 (25%) GO:0005829 (0.1%) GO:0005758 (0%)" "GO:0005524 (25.3%) GO:0004017 (25.2%) GO:0008270 (1%)" "AMP salvage (22.6%) nucleoside monophosphate metabolic process (0.1%) nucleoside diphosphate metabolic process (0.1%)" "cytoplasm (25%) cytosol (0.1%) mitochondrial intermembrane space (0%)" "ATP binding (25.3%) AMP kinase activity (25.2%) zinc ion binding (1%)" "IPR000850 (20.4%) IPR027417 (20.4%) IPR033690 (20.3%)" "Adenylate kinase/UMP-CMP kinase (20.4%) P-loop containing nucleoside triphosphate hydrolase (20.4%) Adenylate kinase, conserved site (20.3%)" VHDDLNTLSEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006015 (48.6%) IPR006016 (48.6%) IPR014729 (2.9%)" "Universal stress protein A family (48.6%) UspA (48.6%) Rossmann-like alpha/beta/alpha sandwich fold (2.9%)" VVTMSDSDGYIYDPDGIDREKLDYIMELK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006537 (25.5%) GO:0005829 (24.5%) "GO:0004354 (25.5%) GO:0000166 (24.5%)" glutamate biosynthetic process (25.5%) cytosol (24.5%) "glutamate dehydrogenase (NADP+) activity (25.5%) nucleotide binding (24.5%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" TKLENGFDLTDYDNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (28.9%) GO:1902600 (28.9%)" "GO:0005524 (28.9%) GO:0016787 (13.2%)" "ATP metabolic process (28.9%) proton transmembrane transport (28.9%)" "ATP binding (28.9%) hydrolase activity (13.2%)" "IPR000194 (20%) IPR004100 (20%) IPR022879 (20%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (20%) V-type ATP synthase regulatory subunit B/beta (20%)" DSLSKDENVYLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (50%) IPR010992 (50%)" "Histone-like DNA-binding protein (50%) Integration host factor (IHF)-like DNA-binding domain superfamily (50%)" FGKFEFRPLEPGFGITVGNALR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.8%) GO:0005737 (16.5%)" "GO:0003899 (16.7%) GO:0046983 (16.7%) GO:0003677 (16.4%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.5%)" "DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%) DNA binding (16.4%)" "IPR011262 (16.8%) IPR011263 (16.8%) IPR036603 (16.8%)" "DNA-directed RNA polymerase, insert domain (16.8%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) RNA polymerase, RBP11-like subunit (16.8%)" VIDPLGEPLDGKGLIGGELYEMPLER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "7.1.2.2 (95.5%) 3.6.3.14 (4.5%)" "H(+)-transporting two-sector ATPase (95.5%) Transferred entry: 7.1.2.2 (4.5%)" GO:0015986 (0.8%) "GO:0045259 (17.6%) GO:0005886 (16.8%)" "GO:0005524 (17.6%) GO:0043531 (17.6%) GO:0046933 (17.6%)" proton motive force-driven ATP synthesis (0.8%) "proton-transporting ATP synthase complex (17.6%) plasma membrane (16.8%)" "ATP binding (17.6%) ADP binding (17.6%) proton-transporting ATP synthase activity, rotational mechanism (17.6%)" "IPR000194 (10.1%) IPR004100 (10.1%) IPR005294 (10.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.1%) ATP synthase, F1 complex, alpha subunit (10.1%)" NFDNMREDEGLADR root "1.11.1.26 (99%) 1.11.1.15 (0.6%) 1.11.1.24 (0.2%)" "NADH-dependent peroxiredoxin (99%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (0.6%) thioredoxin-dependent peroxiredoxin (0.2%)" "GO:0006979 (14.6%) GO:0042744 (14.6%) GO:0045454 (14.6%)" "GO:0005829 (14.6%) GO:0016020 (0.1%) GO:0005737 (0%)" "GO:0008379 (14.6%) GO:0102039 (11.9%) GO:0004601 (0.1%)" "response to oxidative stress (14.6%) hydrogen peroxide catabolic process (14.6%) cell redox homeostasis (14.6%)" "cytosol (14.6%) membrane (0.1%) cytoplasm (0%)" "thioredoxin peroxidase activity (14.6%) NADH-dependent peroxiredoxin activity (11.9%) peroxidase activity (0.1%)" "IPR036249 (14.5%) IPR000866 (14.4%) IPR050217 (14.4%)" "Thioredoxin-like superfamily (14.5%) Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (14.4%) Thiol-specific antioxidant peroxiredoxin (14.4%)" SSDYNYLTSPDDIYVSQSQIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.3%) GO:0005829 (14.3%) "GO:0003723 (14.3%) GO:0004386 (14.3%) GO:0005524 (14.3%)" DNA-templated transcription termination (14.3%) cytosol (14.3%) "RNA binding (14.3%) helicase activity (14.3%) ATP binding (14.3%)" "IPR000194 (10.1%) IPR003593 (10.1%) IPR004665 (10.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%) AAA+ ATPase domain (10.1%) Transcription termination factor Rho (10.1%)" GSQFRQPMLEFSGACAGCVETAYAR YVDLAVNEEIKDIFIKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004824 (16.7%)" lysyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) lysine-tRNA ligase activity (16.7%)" "IPR002313 (12.7%) IPR004364 (12.7%) IPR004365 (12.7%)" "Lysine-tRNA ligase, class II (12.7%) Aminoacyl-tRNA synthetase, class II (D/K/N) (12.7%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (12.7%)" MVDALQHFEEYGEVCPANWSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.11.1.15 (66.7%) 1.11.1.- (33.3%)" "Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (66.7%) Peroxidases (33.3%)" "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" QDLADVELEQVKVIEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0016884 (88.9%) GO:0016740 (11.1%)" "carbon-nitrogen ligase activity, with glutamine as amido-N-donor (88.9%) transferase activity (11.1%)" "IPR003789 (25%) IPR019004 (25%) IPR023168 (25%)" "Aspartyl/glutamyl-tRNA amidotransferase subunit B-like (25%) Uncharacterised protein YqeY/Aim41 (25%) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 (25%)" IIKEAHNANIMFLIQQANIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR011990 (51.1%) IPR019734 (48.9%)" "Tetratricopeptide-like helical domain superfamily (51.1%) Tetratricopeptide repeat (48.9%)" TRTQQNDESDYSNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006811 (20%) "GO:0009279 (20%) GO:0046930 (20%)" "GO:0015159 (20%) GO:0015288 (20%)" monoatomic ion transport (20%) "cell outer membrane (20%) pore complex (20%)" "polysaccharide transmembrane transporter activity (20%) porin activity (20%)" "IPR003715 (25%) IPR019554 (25%) IPR049712 (25%)" "Polysaccharide export protein, N-terminal domain (25%) Soluble ligand binding domain (25%) Polysaccharide export protein (25%)" IVFPHPTVAEIFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (25.2%) GO:0005737 (24.5%) "GO:0004148 (25.2%) GO:0050660 (25.2%)" 2-oxoglutarate metabolic process (25.2%) cytoplasm (24.5%) "dihydrolipoyl dehydrogenase (NADH) activity (25.2%) flavin adenine dinucleotide binding (25.2%)" "IPR004099 (12.7%) IPR016156 (12.7%) IPR036188 (12.7%)" "Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.7%) FAD/NAD-linked reductase, dimerisation domain superfamily (12.7%) FAD/NAD(P)-binding domain superfamily (12.7%)" EKLPDIISEILHSDKWLTLVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis VGFGFDVHQLVEGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.6.1.12 (100%) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (100%) "GO:0016114 (25%) GO:0019288 (25%)" "GO:0008685 (25%) GO:0046872 (25%)" "terpenoid biosynthetic process (25%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (25%)" "2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity (25%) metal ion binding (25%)" "IPR003526 (33.3%) IPR020555 (33.3%) IPR036571 (33.3%)" "2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (33.3%) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site (33.3%) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily (33.3%)" DISPQAPTHILIIPNILIPTVNDVSAEHEQALGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.9.1.- (100%) Acting on phosphorus-nitrogen bonds (100%) GO:0055130 (0.6%) "GO:0005737 (0.6%) GO:0005829 (0.6%)" "GO:0000166 (47.5%) GO:0016787 (46.9%) GO:0003824 (1.9%)" D-alanine catabolic process (0.6%) "cytoplasm (0.6%) cytosol (0.6%)" "nucleotide binding (47.5%) hydrolase activity (46.9%) catalytic activity (1.9%)" "IPR001310 (25.2%) IPR011146 (25.2%) IPR036265 (25.2%)" "Histidine triad (HIT) protein (25.2%) HIT-like domain (25.2%) HIT-like superfamily (25.2%)" RAQAVYDALVAEGVKESQLEK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006811 (21.6%) "GO:0009279 (23%) GO:0046930 (21.6%) GO:0016020 (12.2%)" GO:0015288 (21.6%) monoatomic ion transport (21.6%) "cell outer membrane (23%) pore complex (21.6%) membrane (12.2%)" porin activity (21.6%) "IPR006665 (18.6%) IPR036737 (17.9%) IPR050330 (17.9%)" "OmpA-like domain (18.6%) OmpA-like domain superfamily (17.9%) Bacterial Outer Membrane Structural/Functional (17.9%)" HIVPGVSTLQLDKIAEEFIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.11.18 (100%) methionyl aminopeptidase (100%) GO:0006508 (20%) GO:0005829 (20%) "GO:0004239 (20%) GO:0046914 (20%) GO:0070006 (20%)" proteolysis (20%) cytosol (20%) "initiator methionyl aminopeptidase activity (20%) transition metal ion binding (20%) metalloaminopeptidase activity (20%)" "IPR000994 (25%) IPR001714 (25%) IPR002467 (25%)" "Peptidase M24 (25%) Peptidase M24, methionine aminopeptidase (25%) Peptidase M24A, methionine aminopeptidase, subfamily 1 (25%)" GTENKSNFGANAILAVSLANAK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.1%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.1%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020811 (16.8%) IPR029017 (16.8%)" "Enolase (16.8%) Enolase, N-terminal (16.8%) Enolase-like, N-terminal (16.8%)" NYQIYTEKFYDIIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR007139 (100%) Protein of unknown function DUF349 (100%) ILDPLIVGKEHYDTAQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0005886 (21.9%) GO:0045259 (21.9%)" "GO:0005524 (21.9%) GO:0046933 (21.9%) GO:0016787 (9.4%)" "plasma membrane (21.9%) proton-transporting ATP synthase complex (21.9%)" "ATP binding (21.9%) proton-transporting ATP synthase activity, rotational mechanism (21.9%) hydrolase activity (9.4%)" "IPR000194 (10%) IPR003593 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" ALADFDAGYAIAHR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.14.- (100%) Dipeptidyl-peptidases and tripeptidyl-peptidases (100%) "GO:0006508 (25%) GO:0043171 (25%)" "GO:0008239 (25%) GO:0070009 (25%)" "proteolysis (25%) peptide catabolic process (25%)" "dipeptidyl-peptidase activity (25%) serine-type aminopeptidase activity (25%)" "IPR009003 (33.3%) IPR019500 (33.3%) IPR043504 (33.3%)" "Peptidase S1, PA clan (33.3%) Peptidase S46 (33.3%) Peptidase S1, PA clan, chymotrypsin-like fold (33.3%)" RLNHPLAINEQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0003824 (33.3%) GO:0046872 (33.3%) GO:0051536 (33.3%)" "catalytic activity (33.3%) metal ion binding (33.3%) iron-sulfur cluster binding (33.3%)" "IPR007197 (32.4%) IPR013785 (32.4%) IPR050377 (32.4%)" "Radical SAM (32.4%) Aldolase-type TIM barrel (32.4%) Radical SAM PqqA peptide cyclase/Mycofactocin maturase MftC-like (32.4%)" VTVSKDNTTIVNGAGAKENIQER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.1%) GO:0005737 (16.2%) "GO:0005524 (17.1%) GO:0140662 (17.1%) GO:0016853 (16.2%)" protein refolding (17.1%) cytoplasm (16.2%) "ATP binding (17.1%) ATP-dependent protein folding chaperone (17.1%) isomerase activity (16.2%)" "IPR001844 (17.1%) IPR002423 (17.1%) IPR018370 (17.1%)" "Chaperonin Cpn60/GroEL (17.1%) Chaperonin Cpn60/GroEL/TCP-1 family (17.1%) Chaperonin Cpn60, conserved site (17.1%)" TKEPGAVGEPLYLDVKDCYYGAENAPVIVGGR SQPEVNDAITK Bacteria Bacteria GO:0006950 (100%) response to stress (100%) "IPR010854 (20.1%) IPR025543 (20.1%) IPR036275 (20.1%)" "YdgH/BhsA/McbA-like domain (20.1%) Dodecin-like (20.1%) YdgH-like superfamily (20.1%)" VNEALEKDEIIK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.2%) "GO:0022627 (23.5%) GO:1990904 (1.2%) GO:0005737 (0.8%)" "GO:0003729 (24.6%) GO:0003735 (24.6%) GO:0004654 (0.4%)" translation (24.2%) "cytosolic small ribosomal subunit (23.5%) ribonucleoprotein complex (1.2%) cytoplasm (0.8%)" "mRNA binding (24.6%) structural constituent of ribosome (24.6%) polyribonucleotide nucleotidyltransferase activity (0.4%)" "IPR003029 (23.9%) IPR012340 (23.9%) IPR035104 (23.9%)" "S1 domain (23.9%) Nucleic acid-binding, OB-fold (23.9%) Ribosomal protein S1-like (23.9%)" EAGADYVGLDEYIEK root "GO:0006412 (17%) GO:0006417 (15.8%) GO:0006354 (0.1%)" "GO:0015934 (16.9%) GO:0005840 (0.2%) GO:1990904 (0.2%)" "GO:0003735 (17%) GO:0019843 (16.9%) GO:0000049 (15.8%)" "translation (17%) regulation of translation (15.8%) DNA-templated transcription elongation (0.1%)" "large ribosomal subunit (16.9%) ribosome (0.2%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (17%) rRNA binding (16.9%) tRNA binding (15.8%)" "IPR016095 (16.6%) IPR023674 (16.6%) IPR028364 (16.6%)" "Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.6%) Ribosomal protein uL1-like (16.6%) Ribosomal protein uL1/ribosomal biogenesis protein (16.6%)" LNTAHMMEEGLTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (3.8%) "GO:0000287 (19.2%) GO:0004743 (19.2%) GO:0005524 (19.2%)" response to stress (3.8%) "magnesium ion binding (19.2%) pyruvate kinase activity (19.2%) ATP binding (19.2%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" ELVIEDIDKALHEPTDRR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (13.8%) GO:0006526 (13.8%) GO:0006541 (13.8%)" GO:0005737 (13.8%) "GO:0004088 (13.8%) GO:0005524 (13.8%) GO:0046872 (13.8%)" "pyrimidine nucleotide biosynthetic process (13.8%) L-arginine biosynthetic process (13.8%) glutamine metabolic process (13.8%)" cytoplasm (13.8%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.8%) ATP binding (13.8%) metal ion binding (13.8%)" "IPR005479 (10.3%) IPR005480 (10.3%) IPR005483 (10.3%)" "Carbamoyl phosphate synthase, ATP-binding domain (10.3%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10.3%) Carbamoyl phosphate synthase, CPSase domain (10.3%)" ELQSYSVLER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0046872 (100%) metal ion binding (100%) IPR049279 (100%) DUF3108-like (100%) VVASPGQGQQFEIQASK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 6.1.1.22 (100%) asparagine--tRNA ligase (100%) "GO:0006421 (19.9%) GO:0006418 (0.2%)" "GO:0005737 (19.3%) GO:0016020 (0.2%)" "GO:0003676 (19.9%) GO:0005524 (19.9%) GO:0004816 (19.3%)" "asparaginyl-tRNA aminoacylation (19.9%) tRNA aminoacylation for protein translation (0.2%)" "cytoplasm (19.3%) membrane (0.2%)" "nucleic acid binding (19.9%) ATP binding (19.9%) asparagine-tRNA ligase activity (19.3%)" "IPR004365 (14.9%) IPR012340 (14.9%) IPR045864 (14.7%)" "OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (14.9%) Nucleic acid-binding, OB-fold (14.9%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.7%)" SDILAKPDHIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (33.3%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (33.3%)" "IPR003741 (12.9%) IPR004452 (12.9%) IPR009051 (12.9%)" "LUD domain (12.9%) L-lactate oxidation iron-sulfur protein LutB/LldF (12.9%) Alpha-helical ferredoxin (12.9%)" TNSAALAQILAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (48.9%) IPR019734 (46.3%) IPR013105 (4.6%)" "Tetratricopeptide-like helical domain superfamily (48.9%) Tetratricopeptide repeat (46.3%) Tetratricopeptide repeat 2 (4.6%)" SFGIMAIPTLVIKK Lactobacillaceae Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae GO:0045454 (32%) GO:0005829 (32%) "GO:0015035 (32%) GO:0016853 (4.1%)" cell redox homeostasis (32%) cytosol (32%) "protein-disulfide reductase activity (32%) isomerase activity (4.1%)" "IPR013766 (25.4%) IPR036249 (25.4%) IPR005746 (24.6%)" "Thioredoxin domain (25.4%) Thioredoxin-like superfamily (25.4%) Thioredoxin (24.6%)" GAFGEAEAEAKFEAWKNNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" VSYPIYHIENIVKPVSKGPHAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.3%) GO:0005829 (17.3%) "GO:0004612 (17.3%) GO:0005524 (17.3%) GO:0046872 (17.1%)" gluconeogenesis (17.3%) cytosol (17.3%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.3%) ATP binding (17.3%) metal ion binding (17.1%)" "IPR001272 (25.2%) IPR013035 (25.2%) IPR008210 (24.8%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.2%) Phosphoenolpyruvate carboxykinase, C-terminal (25.2%) Phosphoenolpyruvate carboxykinase, N-terminal (24.8%)" VTNIKPGMVETNFTVVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.- (85.7%) 1.1.1.276 (14.3%)" "With NAD(+) or NADP(+) as acceptor (85.7%) serine 3-dehydrogenase (NADP(+)) (14.3%)" "GO:0016616 (97.6%) GO:0031132 (2.4%)" "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (97.6%) serine 3-dehydrogenase activity (2.4%)" "IPR002347 (33.3%) IPR020904 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Short-chain dehydrogenase/reductase, conserved site (33.3%) NAD(P)-binding domain superfamily (33.3%)" LLATSETPYYLYVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) IKAAQYVASHPGEVCPAK root "1.11.1.26 (96.4%) 1.11.1.15 (2.5%) 1.11.1.24 (0.7%)" "NADH-dependent peroxiredoxin (96.4%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (2.5%) thioredoxin-dependent peroxiredoxin (0.7%)" "GO:0006979 (14.8%) GO:0042744 (14.8%) GO:0045454 (14.8%)" "GO:0005829 (14.8%) GO:0005737 (0.1%) GO:0009321 (0.1%)" "GO:0008379 (14.8%) GO:0102039 (10.3%) GO:0051920 (0.2%)" "response to oxidative stress (14.8%) hydrogen peroxide catabolic process (14.8%) cell redox homeostasis (14.8%)" "cytosol (14.8%) cytoplasm (0.1%) alkyl hydroperoxide reductase complex (0.1%)" "thioredoxin peroxidase activity (14.8%) NADH-dependent peroxiredoxin activity (10.3%) peroxiredoxin activity (0.2%)" "IPR019479 (14.7%) IPR036249 (14.7%) IPR050217 (14.4%)" "Peroxiredoxin, C-terminal (14.7%) Thioredoxin-like superfamily (14.7%) Thiol-specific antioxidant peroxiredoxin (14.4%)" ATPVELDFSQVEKA Bacteria Bacteria "GO:0006353 (20.1%) GO:0031564 (20.1%) GO:0032784 (20.1%)" "GO:0005829 (20.1%) GO:0008023 (0%)" "DNA-templated transcription termination (20.1%) transcription antitermination (20.1%) regulation of DNA-templated transcription elongation (20.1%)" "cytosol (20.1%) transcription elongation factor complex (0%)" "IPR001062 (11.2%) IPR005824 (11.2%) IPR008991 (11.2%)" "Transcription antitermination protein, NusG (11.2%) KOW (11.2%) Translation protein SH3-like domain superfamily (11.2%)" AGFADKFMGISQQAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.13.9 (100%) Xaa-Pro dipeptidase (100%) "GO:0004177 (31.9%) GO:0008235 (31.9%) GO:0046914 (31.9%)" "aminopeptidase activity (31.9%) metalloexopeptidase activity (31.9%) transition metal ion binding (31.9%)" "IPR000587 (16.7%) IPR000994 (16.7%) IPR001714 (16.7%)" "Creatinase, N-terminal (16.7%) Peptidase M24 (16.7%) Peptidase M24, methionine aminopeptidase (16.7%)" FLPIPIAFGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (1.1%) "GO:0005524 (24.4%) GO:0016887 (24.4%) GO:0051082 (24.4%)" cytoplasm (1.1%) "ATP binding (24.4%) ATP hydrolysis activity (24.4%) unfolded protein binding (24.4%)" "IPR001404 (18.1%) IPR020568 (18.1%) IPR020575 (17.8%)" "Heat shock protein Hsp90 family (18.1%) Ribosomal protein uS5 domain 2-type superfamily (18.1%) Heat shock protein Hsp90, N-terminal (17.8%)" RQDAIGTPYCITVDHQTLEDNCVTLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.7%) GO:0015966 (12.1%) GO:0044281 (0.6%)" "GO:0005737 (12.7%) GO:0070062 (12.1%) GO:1990742 (12.1%)" "GO:0004820 (12.7%) GO:0005524 (12.7%) GO:0004081 (12.1%)" "glycyl-tRNA aminoacylation (12.7%) diadenosine tetraphosphate biosynthetic process (12.1%) small molecule metabolic process (0.6%)" "cytoplasm (12.7%) extracellular exosome (12.1%) microvesicle (12.1%)" "glycine-tRNA ligase activity (12.7%) ATP binding (12.7%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.1%)" "IPR002314 (11.3%) IPR004154 (11.3%) IPR006195 (11.3%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.3%) Anticodon-binding (11.3%) Aminoacyl-tRNA synthetase, class II (11.3%)" GCANTSIYDSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.1.- (93.3%) 1.2.1.12 (6.7%)" "With NAD(+) or NADP(+) as acceptor (93.3%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (6.7%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (11.9%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (11.9%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" GKYFEDGEWKETDPLSVHK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.5.1.7 (100%) saccharopine dehydrogenase (NAD(+), L-lysine-forming) (100%) GO:0004754 (100%) saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (100%) "IPR005097 (33.3%) IPR032095 (33.3%) IPR036291 (33.3%)" "Saccharopine dehydrogenase, NADP binding domain (33.3%) Saccharopine dehydrogenase-like, C-terminal (33.3%) NAD(P)-binding domain superfamily (33.3%)" IGHIIAAEVYQVWKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006353 (20%) GO:0031564 (20%)" GO:0005829 (20%) "GO:0003700 (20%) GO:0003723 (20%)" "DNA-templated transcription termination (20%) transcription antitermination (20%)" cytosol (20%) "DNA-binding transcription factor activity (20%) RNA binding (20%)" "IPR009019 (12.5%) IPR010213 (12.5%) IPR012340 (12.5%)" "K homology domain superfamily, prokaryotic type (12.5%) Transcription factor NusA (12.5%) Nucleic acid-binding, OB-fold (12.5%)" SEYFIPLMVNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016740 (100%) transferase activity (100%) "IPR029044 (84.4%) IPR005835 (15.6%)" "Nucleotide-diphospho-sugar transferases (84.4%) Nucleotidyl transferase domain (15.6%)" SIAICTLLDKPSRR root 2.4.2.8 (100%) hypoxanthine phosphoribosyltransferase (100%) "GO:0006178 (10%) GO:0032263 (10%) GO:0032264 (10%)" "GO:0005829 (10%) GO:0032991 (0%)" "GO:0000287 (10%) GO:0004422 (10%) GO:0052657 (10%)" "guanine salvage (10%) GMP salvage (10%) IMP salvage (10%)" "cytosol (10%) protein-containing complex (0%)" "magnesium ion binding (10%) hypoxanthine phosphoribosyltransferase activity (10%) guanine phosphoribosyltransferase activity (10%)" "IPR029057 (25.1%) IPR050408 (25.1%) IPR000836 (25.1%)" "Phosphoribosyltransferase-like (25.1%) Hypoxanthine-guanine phosphoribosyltransferase (25.1%) Phosphoribosyltransferase domain (25.1%)" GYNPINQIVGYVLSGDPAYVPR Bacteria Bacteria IPR009309 (100%) IreB regulatory phosphoprotein (100%) NPADLKWGEIGAEYVVESTGLFLTK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (22.2%) GO:0006096 (11.1%)" "GO:0004365 (22.2%) GO:0050661 (22.2%) GO:0051287 (22.2%)" "glucose metabolic process (22.2%) glycolytic process (11.1%)" "glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (22.2%) NADP binding (22.2%) NAD binding (22.2%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" KGNSLLTEINR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR007139 (100%) Protein of unknown function DUF349 (100%) IGDGKIFVFDVAR root "6.4.1.2 (66.7%) 1.18.6.1 (33.3%)" "acetyl-CoA carboxylase (66.7%) nitrogenase (33.3%)" "GO:0006808 (24.6%) GO:0009399 (0%) GO:0042304 (0%)" GO:0005829 (24.6%) "GO:0005524 (24.6%) GO:0030234 (24.6%) GO:0046872 (1.2%)" "regulation of nitrogen utilization (24.6%) nitrogen fixation (0%) regulation of fatty acid biosynthetic process (0%)" cytosol (24.6%) "ATP binding (24.6%) enzyme regulator activity (24.6%) metal ion binding (1.2%)" "IPR002187 (20%) IPR011322 (20%) IPR015867 (20%)" "Nitrogen regulatory protein PII (20%) Nitrogen regulatory PII-like, alpha/beta (20%) Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal (20%)" SGVTHFMCDNEEETLMSIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "6.4.1.3 (66.7%) 6.4.1.2 (33.3%)" "propionyl-CoA carboxylase (66.7%) acetyl-CoA carboxylase (33.3%)" GO:0015977 (19.4%) GO:0009317 (19.4%) "GO:0004658 (31.1%) GO:0003989 (20%) GO:0016740 (10%)" carbon fixation (19.4%) acetyl-CoA carboxylase complex (19.4%) "propionyl-CoA carboxylase activity (31.1%) acetyl-CoA carboxylase activity (20%) transferase activity (10%)" "IPR029045 (20.4%) IPR034733 (20.4%) IPR051047 (20.4%)" "ClpP/crotonase-like domain superfamily (20.4%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.4%) Acyl-CoA Carboxylase Beta Subunit (20.4%)" SVGKLEPGELYYFAGIDEAR root "4.2.1.59 (99.7%) 4.2.1.- (0.3%)" "3-hydroxyacyl-[acyl-carrier-protein] dehydratase (99.7%) Hydro-lyases (0.3%)" "GO:0009245 (20.1%) GO:0006633 (19.4%)" "GO:0005737 (20.1%) GO:0016020 (20.1%)" "GO:0019171 (16%) GO:0016836 (3.5%) GO:0016829 (0.8%)" "lipid A biosynthetic process (20.1%) fatty acid biosynthetic process (19.4%)" "cytoplasm (20.1%) membrane (20.1%)" "(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (16%) hydro-lyase activity (3.5%) lyase activity (0.8%)" "IPR013114 (33.5%) IPR029069 (33.5%) IPR010084 (32.4%)" "Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ (33.5%) HotDog domain superfamily (33.5%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (32.4%)" YFKPEEVNIKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0046034 (32.2%) GO:1902600 (32.2%) GO:0006811 (1.7%)" GO:0005524 (33%) "ATP metabolic process (32.2%) proton transmembrane transport (32.2%) monoatomic ion transport (1.7%)" ATP binding (33%) "IPR055190 (20.2%) IPR000194 (19.7%) IPR022879 (19.7%)" "ATP synthase A/B type, C-terminal domain (20.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (19.7%) V-type ATP synthase regulatory subunit B/beta (19.7%)" TNRADRPIENIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR002130 (25%) IPR020892 (25%) IPR029000 (25%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (25%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (25%) Cyclophilin-like domain superfamily (25%)" VSEGQTVRLEK Bacteria Bacteria "GO:0006412 (16.6%) GO:0002181 (0%)" "GO:0005840 (16.9%) GO:0005737 (16.6%) GO:1990904 (16.6%)" "GO:0003735 (16.6%) GO:0019843 (16.6%) GO:0003723 (0%)" "translation (16.6%) cytoplasmic translation (0%)" "ribosome (16.9%) cytoplasm (16.6%) ribonucleoprotein complex (16.6%)" "structural constituent of ribosome (16.6%) rRNA binding (16.6%) RNA binding (0%)" "IPR001787 (25.1%) IPR028909 (25.1%) IPR036164 (25.1%)" "Large ribosomal subunit protein bL21 (25.1%) Large ribosomal subunit protein bL21-like (25.1%) Large ribosomal subunit protein bL21-like superfamily (25.1%)" AAVDAGYADHDR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) GO:0033539 (32.2%) "GO:0009055 (32.2%) GO:0050660 (32.2%) GO:0016491 (3.4%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (32.2%) "electron transfer activity (32.2%) flavin adenine dinucleotide binding (32.2%) oxidoreductase activity (3.4%)" "IPR001308 (16.7%) IPR014731 (16.7%) IPR029035 (16.7%)" "Electron transfer flavoprotein alpha subunit/FixB (16.7%) Electron transfer flavoprotein, alpha subunit, C-terminal (16.7%) DHS-like NAD/FAD-binding domain superfamily (16.7%)" WCPDVIHCHGWMTALAPLYIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.21 (100%) starch synthase (100%) "GO:0016757 (81.3%) GO:0009011 (18.8%)" "glycosyltransferase activity (81.3%) alpha-1,4-glucan glucosyltransferase (ADP-glucose donor) activity (18.8%)" IPR013534 (100%) Starch synthase, catalytic domain (100%) VQEFMKDLETECYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (50%) GO:0004356 (50%) glutamine biosynthetic process (50%) glutamine synthetase activity (50%) "IPR008146 (14.3%) IPR008147 (14.3%) IPR014746 (14.3%)" "Glutamine synthetase, catalytic domain (14.3%) Glutamine synthetase, N-terminal domain (14.3%) Glutamine synthetase/guanido kinase, catalytic domain (14.3%)" YELHHHVQITDPAIVAAATLSHR root "GO:0034605 (16.8%) GO:0042026 (15.7%) GO:0006508 (1%)" "GO:0005829 (14.8%) GO:0005737 (2%) GO:0005759 (0%)" "GO:0005524 (16.8%) GO:0016887 (16.8%) GO:0042802 (14.8%)" "cellular response to heat (16.8%) protein refolding (15.7%) proteolysis (1%)" "cytosol (14.8%) cytoplasm (2%) mitochondrial matrix (0%)" "ATP binding (16.8%) ATP hydrolysis activity (16.8%) identical protein binding (14.8%)" "IPR027417 (8.6%) IPR041546 (8.6%) IPR050130 (8.6%)" "P-loop containing nucleoside triphosphate hydrolase (8.6%) ClpA/ClpB, AAA lid domain (8.6%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%)" FGPVVQIGTADDTDKPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.6.2.1 (97.9%) 5.99.1.2 (2.1%)" "DNA topoisomerase (97.9%) Transferred entry: 5.6.2.1 (2.1%)" GO:0006265 (25.1%) "GO:0003677 (25.1%) GO:0003917 (25.1%) GO:0046872 (24.6%)" DNA topological change (25.1%) "DNA binding (25.1%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25.1%) metal ion binding (24.6%)" "IPR000380 (7.2%) IPR003601 (7.2%) IPR003602 (7.2%)" "DNA topoisomerase, type IA (7.2%) DNA topoisomerase, type IA, domain 2 (7.2%) DNA topoisomerase, type IA, DNA-binding domain (7.2%)" AFESDEVNNIITALGVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (14.8%) GO:0006261 (9.9%)" "GO:0005737 (10.5%) GO:0005694 (9.9%)" "GO:0003677 (14.8%) GO:0005524 (14.8%) GO:0046872 (10.5%)" "DNA topological change (14.8%) DNA-templated DNA replication (9.9%)" "cytoplasm (10.5%) chromosome (9.9%)" "DNA binding (14.8%) ATP binding (14.8%) metal ion binding (10.5%)" "IPR000565 (8.3%) IPR001241 (8.3%) IPR006171 (8.3%)" "DNA topoisomerase, type IIA, subunit B (8.3%) DNA topoisomerase, type IIA (8.3%) TOPRIM domain (8.3%)" AEELRDATPGSIILQQFENPANPAVHIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.5.1.47 (100%) cysteine synthase (100%) GO:0006535 (50%) GO:0004124 (50%) cysteine biosynthetic process from serine (50%) cysteine synthase activity (50%) "IPR001216 (16.7%) IPR001926 (16.7%) IPR005856 (16.7%)" "Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site (16.7%) Tryptophan synthase beta chain-like, PALP domain (16.7%) Cysteine synthase (16.7%)" EKPTWLEVDAGKMEGTFK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0042274 (19.5%) GO:0006412 (19.1%) GO:0006353 (0.2%)" "GO:0015935 (19.5%) GO:0005840 (0.9%) GO:0005737 (0.1%)" "GO:0019843 (19.6%) GO:0003735 (19.5%) GO:0016787 (0.6%)" "ribosomal small subunit biogenesis (19.5%) translation (19.1%) DNA-templated transcription termination (0.2%)" "small ribosomal subunit (19.5%) ribosome (0.9%) cytoplasm (0.1%)" "rRNA binding (19.6%) structural constituent of ribosome (19.5%) hydrolase activity (0.6%)" "IPR036986 (16.9%) IPR002942 (16.8%) IPR022801 (16.8%)" "RNA-binding S4 domain superfamily (16.9%) RNA-binding S4 domain (16.8%) Small ribosomal subunit protein uS4 (16.8%)" EVTTTPLAADDWK root 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.6%) GO:0046040 (16.6%) GO:0006164 (0%)" "GO:0005737 (16.6%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0004019 (16.6%) GO:0005525 (16.6%) GO:0000287 (16.3%)" "'de novo' AMP biosynthetic process (16.6%) IMP metabolic process (16.6%) purine nucleotide biosynthetic process (0%)" "cytoplasm (16.6%) cytosol (0%) membrane (0%)" "adenylosuccinate synthase activity (16.6%) GTP binding (16.6%) magnesium ion binding (16.3%)" "IPR001114 (14.6%) IPR027417 (14.6%) IPR042111 (14.6%)" "Adenylosuccinate synthetase (14.6%) P-loop containing nucleoside triphosphate hydrolase (14.6%) Adenylosuccinate synthetase, domain 3 (14.6%)" TAFWGILSGEKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) GO:0044550 (50%) "GO:0016746 (44.4%) GO:0033818 (5.6%)" secondary metabolite biosynthetic process (50%) "acyltransferase activity (44.4%) beta-ketoacyl-acyl-carrier-protein synthase III activity (5.6%)" "IPR013747 (50%) IPR016039 (50%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (50%) Thiolase-like (50%)" LIDQVEGALYEVKPDASIPDDDTELLR Pseudomonadati Bacteria Pseudomonadati "GO:0009267 (46.8%) GO:0016036 (0.6%) GO:0042177 (0.6%)" GO:0005737 (51.3%) GO:0043856 (0.6%) "cellular response to starvation (46.8%) cellular response to phosphate starvation (0.6%) negative regulation of protein catabolic process (0.6%)" cytoplasm (51.3%) anti-sigma factor antagonist activity (0.6%) IPR019732 (100%) Sigma-S stabilisation anti-adaptor protein (100%) EAAIQVSNVAIFNAATGK root "GO:0006412 (16.6%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (17%) GO:1990904 (16.5%) GO:0005829 (16.4%)" "GO:0003735 (16.6%) GO:0019843 (16.5%) GO:0000049 (0.1%)" "translation (16.6%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (17%) ribonucleoprotein complex (16.5%) cytosol (16.4%)" "structural constituent of ribosome (16.6%) rRNA binding (16.5%) tRNA binding (0.1%)" "IPR003256 (14.4%) IPR008991 (14.4%) IPR014722 (14.4%)" "Large ribosomal subunit protein uL24 (14.4%) Translation protein SH3-like domain superfamily (14.4%) Large ribosomal subunit protein uL2, domain 2 (14.4%)" AYAAASVLTTAKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) AGLQDPKRPIGSFIFLGTTGVGK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0034605 (19.1%) GO:0042026 (18.5%) GO:0006508 (2.4%)" GO:0005737 (19.1%) "GO:0005524 (19.1%) GO:0016887 (19.1%) GO:0008233 (2.4%)" "cellular response to heat (19.1%) protein refolding (18.5%) proteolysis (2.4%)" cytoplasm (19.1%) "ATP binding (19.1%) ATP hydrolysis activity (19.1%) peptidase activity (2.4%)" "IPR001270 (8.3%) IPR003959 (8.3%) IPR027417 (8.3%)" "ClpA/B family (8.3%) ATPase, AAA-type, core (8.3%) P-loop containing nucleoside triphosphate hydrolase (8.3%)" FFDIGNDHYYYDDFQNEEIIHR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005975 (50%) "GO:0003824 (25%) GO:0016787 (16.7%) GO:0016798 (8.3%)" carbohydrate metabolic process (50%) "catalytic activity (25%) hydrolase activity (16.7%) hydrolase activity, acting on glycosyl bonds (8.3%)" "IPR004300 (33.3%) IPR011330 (33.3%) IPR052046 (33.3%)" "Glycoside hydrolase family 57, N-terminal domain (33.3%) Glycoside hydrolase/deacetylase, beta/alpha-barrel (33.3%) Glycosyl hydrolase family 57 (33.3%)" EILKDETIAVIGYGVQGPGQSLNLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.86 (100%) ketol-acid reductoisomerase (NADP(+)) (100%) "GO:0009097 (22%) GO:0009099 (22%)" "GO:0004455 (22%) GO:0046872 (22%) GO:0016853 (12%)" "isoleucine biosynthetic process (22%) L-valine biosynthetic process (22%)" "ketol-acid reductoisomerase activity (22%) metal ion binding (22%) isomerase activity (12%)" "IPR000506 (16.7%) IPR008927 (16.7%) IPR013023 (16.7%)" "Ketol-acid reductoisomerase, C-terminal (16.7%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.7%) Ketol-acid reductoisomerase (16.7%)" HPEKYPQLTIR root "2.3.1.54 (99.1%) 2.3.1.- (0.8%) 1.17.4.2 (0.1%)" "formate C-acetyltransferase (99.1%) Transferring groups other than amino-acyl groups (0.8%) ribonucleoside-triphosphate reductase (thioredoxin) (0.1%)" "GO:0006006 (20.6%) GO:0005975 (0.2%) GO:0006367 (0%)" "GO:0005829 (34.5%) GO:0005634 (0%) GO:0005737 (0%)" "GO:0008861 (39.8%) GO:0016829 (4.7%) GO:0016746 (0.2%)" "glucose metabolic process (20.6%) carbohydrate metabolic process (0.2%) transcription initiation at RNA polymerase II promoter (0%)" "cytosol (34.5%) nucleus (0%) cytoplasm (0%)" "formate C-acetyltransferase activity (39.8%) lyase activity (4.7%) acyltransferase activity (0.2%)" "IPR001150 (22.3%) IPR050244 (22.3%) IPR019777 (22.3%)" "Glycine radical domain (22.3%) Autonomous Glycyl Radical Cofactor (22.3%) Formate C-acetyltransferase glycine radical, conserved site (22.3%)" LIVNDVECIEPKPLPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.4 (100%) L-arabinose isomerase (100%) GO:0019569 (25%) GO:0005829 (25%) "GO:0008733 (25%) GO:0030145 (25%)" L-arabinose catabolic process to D-xylulose 5-phosphate (25%) cytosol (25%) "L-arabinose isomerase activity (25%) manganese ion binding (25%)" "IPR003762 (14.3%) IPR004216 (14.3%) IPR009015 (14.3%)" "L-arabinose isomerase (14.3%) L-fucose/L-arabinose isomerase, C-terminal (14.3%) L-fucose isomerase, N-terminal/central domain superfamily (14.3%)" KRPGKDLDRIDR root "GO:0006524 (19.9%) GO:0043201 (19.9%) GO:0006355 (19.8%)" "GO:0005829 (19.9%) GO:0005886 (0%) GO:0016020 (0%)" "GO:0043565 (20%) GO:0042802 (0.1%) GO:0000976 (0%)" "alanine catabolic process (19.9%) response to L-leucine (19.9%) regulation of DNA-templated transcription (19.8%)" "cytosol (19.9%) plasma membrane (0%) membrane (0%)" "sequence-specific DNA binding (20%) identical protein binding (0.1%) transcription cis-regulatory region binding (0%)" "IPR036388 (12.6%) IPR000485 (12.6%) IPR036390 (12.6%)" "Winged helix-like DNA-binding domain superfamily (12.6%) AsnC-type HTH domain (12.6%) Winged helix DNA-binding domain superfamily (12.6%)" QNFAQEVINVICHYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.3.3 (100%) N-acetylneuraminate lyase (100%) GO:0005737 (50%) "GO:0016829 (45.1%) GO:0008747 (4.9%)" cytoplasm (50%) "lyase activity (45.1%) N-acetylneuraminate lyase activity (4.9%)" "IPR002220 (51.2%) IPR013785 (48.8%)" "DapA-like (51.2%) Aldolase-type TIM barrel (48.8%)" YRYELATMGCR Bacteria Bacteria 1.17.4.2 (100%) ribonucleoside-triphosphate reductase (thioredoxin) (100%) "GO:0006260 (16.7%) GO:0009265 (16.7%)" GO:0031250 (16.7%) "GO:0004748 (16.7%) GO:0008998 (16.7%) GO:0005524 (16%)" "DNA replication (16.7%) 2'-deoxyribonucleotide biosynthetic process (16.7%)" anaerobic ribonucleoside-triphosphate reductase complex (16.7%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.7%) ribonucleoside-triphosphate reductase (thioredoxin) activity (16.7%) ATP binding (16%)" "IPR012833 (51.1%) IPR005144 (48.9%)" "Ribonucleoside-triphosphate reductase, anaerobic (51.1%) ATP-cone domain (48.9%)" KVINLDKDSEPDIYNAIK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.4%) GO:0005829 (17.4%) "GO:0004612 (17.4%) GO:0005524 (17.4%) GO:0046872 (17.2%)" gluconeogenesis (17.4%) cytosol (17.4%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.4%) ATP binding (17.4%) metal ion binding (17.2%)" "IPR001272 (25.1%) IPR015994 (25.1%) IPR008210 (24.9%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.1%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (25.1%) Phosphoenolpyruvate carboxykinase, N-terminal (24.9%)" ICEHYVTVTQK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 2.5.1.55 (100%) 3-deoxy-8-phosphooctulonate synthase (100%) "GO:0019294 (29.9%) GO:0009103 (3.1%) GO:0046394 (0.2%)" "GO:0005737 (33%) GO:0005829 (0.1%) GO:0032991 (0%)" "GO:0008676 (33.2%) GO:0016740 (0.3%) GO:0042802 (0%)" "keto-3-deoxy-D-manno-octulosonic acid biosynthetic process (29.9%) lipopolysaccharide biosynthetic process (3.1%) carboxylic acid biosynthetic process (0.2%)" "cytoplasm (33%) cytosol (0.1%) protein-containing complex (0%)" "3-deoxy-8-phosphooctulonate synthase activity (33.2%) transferase activity (0.3%) identical protein binding (0%)" "IPR013785 (33.4%) IPR006218 (33.3%) IPR006269 (33.3%)" "Aldolase-type TIM barrel (33.4%) DAHP synthetase I/KDSA (33.3%) 3-deoxy-8-phosphooctulonate synthase (33.3%)" CDELAQIPNEKGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (33.5%) IPR051685 (33%) IPR019734 (30.3%)" "Tetratricopeptide-like helical domain superfamily (33.5%) Ycf3/AcsC/BcsC/TPR Multifunctional (33%) Tetratricopeptide repeat (30.3%)" LTAVSTPGDLLFHIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.- (100%) Peroxidases (100%) GO:0005829 (33.3%) "GO:0004601 (33.3%) GO:0020037 (33.3%)" cytosol (33.3%) "peroxidase activity (33.3%) heme binding (33.3%)" "IPR006314 (25%) IPR011008 (25%) IPR048327 (25%)" "Dyp-type peroxidase (25%) Dimeric alpha-beta barrel (25%) Dyp-type peroxidase, N-terminal domain (25%)" HVMSPAAFEDSAWQCTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0016757 (64.3%) GO:0016798 (28.6%) GO:0016787 (7.1%)" "glycosyltransferase activity (64.3%) hydrolase activity, acting on glycosyl bonds (28.6%) hydrolase activity (7.1%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" TVLEALNTDLVCDAINTAMR Bacteria Bacteria LQVEHLVTEETTGVDLVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "6.3.4.14 (70%) 6.4.1.7 (30%)" "biotin carboxylase (70%) 2-oxoglutarate carboxylase (30%)" GO:2001295 (17.8%) "GO:0005524 (22.2%) GO:0046872 (22.2%) GO:0003989 (15.6%)" malonyl-CoA biosynthetic process (17.8%) "ATP binding (22.2%) metal ion binding (22.2%) acetyl-CoA carboxylase activity (15.6%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" LHVHDENNECGIGDVVEIRECRPLSK root "GO:0006412 (24.4%) GO:0000028 (0.2%) GO:0002181 (0.1%)" "GO:0022627 (24.5%) GO:0005840 (1.3%) GO:0005737 (0.1%)" "GO:0003735 (24.5%) GO:0019843 (24.5%) GO:0008270 (0.1%)" "translation (24.4%) ribosomal small subunit assembly (0.2%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (24.5%) ribosome (1.3%) cytoplasm (0.1%)" "structural constituent of ribosome (24.5%) rRNA binding (24.5%) zinc ion binding (0.1%)" "IPR000266 (25%) IPR012340 (25%) IPR019979 (25%)" "Small ribosomal subunit protein uS17 (25%) Nucleic acid-binding, OB-fold (25%) Small ribosomal subunit protein uS17, conserved site (25%)" RVEIFMYASEQMIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (20%) IPR006665 (20%) IPR036737 (20%)" "Outer membrane protein, bacterial (20%) OmpA-like domain (20%) OmpA-like domain superfamily (20%)" YRNPAIILADGVIGQMMEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.3 (37.5%) 1.2.7.1 (31.3%) 1.2.7.7 (18.8%)" "2-oxoglutarate synthase (37.5%) pyruvate synthase (31.3%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) (18.8%)" "GO:0016491 (76.1%) GO:0019164 (9%) GO:0047553 (8.2%)" "oxidoreductase activity (76.1%) pyruvate synthase activity (9%) 2-oxoglutarate synthase activity (8.2%)" "IPR002880 (20.1%) IPR029061 (20.1%) IPR052368 (20.1%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20.1%) Thiamin diphosphate-binding fold (20.1%) 2-oxoacid oxidoreductase subunit (20.1%)" SIIGDKPINYLIINHMEPDHSGSISLIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.6.3.- (50%) 1.6.3.4 (25%) 2.5.1.26 (25%)" "With oxygen as acceptor (50%) NADH oxidase (H2O-forming) (25%) alkylglycerone-phosphate synthase (25%)" "GO:0009055 (23.7%) GO:0010181 (23.7%) GO:0016491 (23.7%)" "electron transfer activity (23.7%) FMN binding (23.7%) oxidoreductase activity (23.7%)" "IPR036866 (15%) IPR045761 (15%) IPR001279 (14%)" "Ribonuclease Z/Hydroxyacylglutathione hydrolase-like (15%) ODP domain (15%) Metallo-beta-lactamase (14%)" ATELTPEQAAAVKPFDR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0006950 (100%) response to stress (100%) "IPR036275 (20.4%) IPR010854 (20.2%) IPR025543 (20.2%)" "YdgH-like superfamily (20.4%) YdgH/BhsA/McbA-like domain (20.2%) Dodecin-like (20.2%)" IDENNNLVVSMEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" SGELKPGGVIVEPTSGNTGVGLALVAQQR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 4.2.1.22 (100%) cystathionine beta-synthase (100%) "GO:0019343 (16.9%) GO:0006534 (14.3%) GO:0009069 (14.3%)" GO:0005737 (16.9%) "GO:0004122 (18.2%) GO:0016740 (2.6%) GO:0016765 (1.3%)" "cysteine biosynthetic process via cystathionine (16.9%) cysteine metabolic process (14.3%) obsolete serine family amino acid metabolic process (14.3%)" cytoplasm (16.9%) "cystathionine beta-synthase activity (18.2%) transferase activity (2.6%) transferase activity, transferring alkyl or aryl (other than methyl) groups (1.3%)" "IPR001926 (27.9%) IPR036052 (27.9%) IPR050214 (27.9%)" "Tryptophan synthase beta chain-like, PALP domain (27.9%) Tryptophan synthase beta chain-like, PALP domain superfamily (27.9%) Cysteine synthase/Cystathionine beta-synthase (27.9%)" MFELLGFTPER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.12 (100%) aspartate--tRNA ligase (100%) GO:0006422 (20.4%) GO:0005737 (19.3%) "GO:0004815 (20.4%) GO:0005524 (20.4%) GO:0003676 (19%)" aspartyl-tRNA aminoacylation (20.4%) cytoplasm (19.3%) "aspartate-tRNA ligase activity (20.4%) ATP binding (20.4%) nucleic acid binding (19%)" "IPR004364 (9.6%) IPR045864 (9.6%) IPR002312 (9.4%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (9.6%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (9.6%) Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.4%)" ELCESQDDFNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR007139 (100%) Protein of unknown function DUF349 (100%) AIMASDLGLNPNSAGSDIR root "GO:0002184 (33%) GO:0006412 (0.3%)" "GO:0005829 (33%) GO:0005737 (0.3%)" "GO:0043023 (33%) GO:0003746 (0.3%)" "cytoplasmic translational termination (33%) translation (0.3%)" "cytosol (33%) cytoplasm (0.3%)" "ribosomal large subunit binding (33%) translation elongation factor activity (0.3%)" "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" GVYYVADCQADGREK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR021533 (100%) Putative beta-lactamase-inhibitor-like, PepSY-like (100%) DIEKDHLCPCSLLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (11.4%) GO:0005737 (2.9%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (11.4%) cytoplasm (2.9%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" IAQDKNIAVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.15 (100%) glutamate decarboxylase (100%) GO:0006538 (25%) GO:0005829 (25%) "GO:0004351 (25%) GO:0030170 (25%)" L-glutamate catabolic process (25%) cytosol (25%) "glutamate decarboxylase activity (25%) pyridoxal phosphate binding (25%)" "IPR002129 (25%) IPR010107 (25%) IPR015421 (25%)" "Pyridoxal phosphate-dependent decarboxylase (25%) Glutamate decarboxylase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%)" GIKDVVTQPQA Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0034220 (20.4%) GO:0006811 (3.6%) GO:0006974 (0.1%)" "GO:0009279 (23.9%) GO:0046930 (23.9%) GO:0016020 (0.2%)" "GO:0015288 (23.9%) GO:0016740 (3.6%) GO:0015075 (0.1%)" "monoatomic ion transmembrane transport (20.4%) monoatomic ion transport (3.6%) DNA damage response (0.1%)" "cell outer membrane (23.9%) pore complex (23.9%) membrane (0.2%)" "porin activity (23.9%) transferase activity (3.6%) monoatomic ion transmembrane transporter activity (0.1%)" "IPR006665 (12.7%) IPR036737 (12.7%) IPR002368 (12.7%)" "OmpA-like domain (12.7%) OmpA-like domain superfamily (12.7%) Outer membrane protein, OmpA (12.7%)" FCVHLIPETLER root "2.5.1.9 (99.9%) 1.-.-.- (0.1%)" "riboflavin synthase (99.9%) Oxidoreductases (0.1%)" GO:0009231 (33.2%) GO:0005829 (33.1%) "GO:0004746 (33.2%) GO:0016491 (0.3%) GO:0016740 (0.2%)" riboflavin biosynthetic process (33.2%) cytosol (33.1%) "riboflavin synthase activity (33.2%) oxidoreductase activity (0.3%) transferase activity (0.2%)" "IPR026017 (25.1%) IPR001783 (25%) IPR017938 (25%)" "Lumazine-binding domain (25.1%) Lumazine-binding protein (25%) Riboflavin synthase-like beta-barrel (25%)" SLYVDTAPMR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota GO:0005829 (48%) "GO:0005524 (48.1%) GO:0016787 (3.8%)" cytosol (48%) "ATP binding (48.1%) hydrolase activity (3.8%)" "IPR051451 (33.8%) IPR003714 (33.2%) IPR027417 (33%)" "PhoH2-like (33.8%) PhoH-like protein (33.2%) P-loop containing nucleoside triphosphate hydrolase (33%)" LADCSSRNPEECELFLVEGDSAGGSAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (14.6%) GO:0006261 (9.7%) GO:0032259 (0.4%)" "GO:0005694 (10.2%) GO:0005737 (10.2%)" "GO:0003677 (14.6%) GO:0005524 (14.6%) GO:0046872 (10.6%)" "DNA topological change (14.6%) DNA-templated DNA replication (9.7%) methylation (0.4%)" "chromosome (10.2%) cytoplasm (10.2%)" "DNA binding (14.6%) ATP binding (14.6%) metal ion binding (10.6%)" "IPR000565 (8.2%) IPR001241 (8.2%) IPR006171 (8.2%)" "DNA topoisomerase, type IIA, subunit B (8.2%) DNA topoisomerase, type IIA (8.2%) TOPRIM domain (8.2%)" NHIPYYDKTYTGDVHDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" HSLSNAGSFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.2%) "GO:0008184 (33.2%) GO:0030170 (33.2%) GO:0016740 (0.5%)" carbohydrate metabolic process (33.2%) "glycogen phosphorylase activity (33.2%) pyridoxal phosphate binding (33.2%) transferase activity (0.5%)" "IPR052182 (25.7%) IPR000811 (24.9%) IPR011834 (24.9%)" "Glycogen_Maltodextrin_Phosphorylase (25.7%) Glycosyl transferase, family 35 (24.9%) Alpha-glucan phosphorylase (24.9%)" RTEEEIIAQCPWAVQGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0016491 (66.7%) GO:0019164 (33.3%)" "oxidoreductase activity (66.7%) pyruvate synthase activity (33.3%)" "IPR002880 (20%) IPR009014 (20%) IPR029061 (20%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%) Thiamin diphosphate-binding fold (20%)" FTDFINYDKVETYKDFGGIRNEEDYLITETGAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.11.9 (96.8%) 3.4.-.- (3.2%)" "Xaa-Pro aminopeptidase (96.8%) Acting on peptide bonds (peptidases) (3.2%)" GO:0006508 (23.4%) "GO:0005829 (23.4%) GO:0016020 (5.5%)" "GO:0030145 (23.4%) GO:0070006 (23.4%) GO:0004177 (0.8%)" proteolysis (23.4%) "cytosol (23.4%) membrane (5.5%)" "manganese ion binding (23.4%) metalloaminopeptidase activity (23.4%) aminopeptidase activity (0.8%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" IKVYFITIDEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR027848 (100%) Protein of unknown function DUF4494 (100%) HHFDEIHYLDIVDCNAGDHHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.5.1.7 (60%) 1.-.-.- (20%) 1.5.1.43 (20%)" "saccharopine dehydrogenase (NAD(+), L-lysine-forming) (60%) Oxidoreductases (20%) carboxynorspermidine synthase (20%)" "GO:0004754 (60%) GO:0016491 (20%) GO:0102143 (20%)" "saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (60%) oxidoreductase activity (20%) carboxynorspermidine dehydrogenase activity (20%)" "IPR032095 (34.5%) IPR005097 (32.7%) IPR036291 (32.7%)" "Saccharopine dehydrogenase-like, C-terminal (34.5%) Saccharopine dehydrogenase, NADP binding domain (32.7%) NAD(P)-binding domain superfamily (32.7%)" NKNPLIILESCDKQLLGQVCSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0002181 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.2%)" "GO:0003735 (24.9%) GO:0019843 (24.9%)" cytoplasmic translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.2%)" "structural constituent of ribosome (24.9%) rRNA binding (24.9%)" "IPR000702 (20%) IPR019906 (20%) IPR020040 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, bacteria (20%) Large ribosomal subunit protein uL6, alpha-beta domain (20%)" MILPIYVYGQPVLR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.5.1.88 (100%) peptide deformylase (100%) "GO:0043686 (25.3%) GO:0006412 (24.6%)" "GO:0042586 (25.3%) GO:0046872 (24.6%) GO:0016787 (0.2%)" "obsolete co-translational protein modification (25.3%) translation (24.6%)" "peptide deformylase activity (25.3%) metal ion binding (24.6%) hydrolase activity (0.2%)" "IPR023635 (50%) IPR036821 (50%)" "Peptide deformylase (50%) Peptide deformylase superfamily (50%)" QGNALGWATAGGSGFR root "GO:0006412 (20%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0005840 (20.2%) GO:1990904 (19.9%) GO:0022627 (0.1%)" "GO:0003735 (20%) GO:0019843 (19.8%) GO:0070181 (0%)" "translation (20%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (20.2%) ribonucleoprotein complex (19.9%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (20%) rRNA binding (19.8%) small ribosomal subunit rRNA binding (0%)" "IPR001971 (25.1%) IPR036967 (25.1%) IPR018102 (24.9%)" "Small ribosomal subunit protein uS11 (25.1%) Small ribosomal subunit protein uS11 superfamily (25.1%) Small ribosomal subunit protein uS11, conserved site (24.9%)" LGIPVFGIVDTNSDPTNIDFVIPANDDATK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (32.8%) "GO:0022627 (32.8%) GO:0005840 (1.6%)" GO:0003735 (32.8%) translation (32.8%) "cytosolic small ribosomal subunit (32.8%) ribosome (1.6%)" structural constituent of ribosome (32.8%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" VNVLETLKEFNAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (24.6%) "GO:0031419 (25%) GO:0046872 (25%) GO:0004494 (24.6%)" lactate fermentation to propionate and acetate (24.6%) "cobalamin binding (25%) metal ion binding (25%) methylmalonyl-CoA mutase activity (24.6%)" "IPR006099 (25.1%) IPR016176 (25.1%) IPR036724 (25.1%)" "Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25.1%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25.1%) Cobalamin-binding domain superfamily (25.1%)" FAPSPTGFVHIGSLR root "6.1.1.17 (95.2%) 6.1.1.24 (4.8%)" "glutamate--tRNA ligase (95.2%) glutamate--tRNA(Gln) ligase (4.8%)" GO:0006424 (16.7%) "GO:0005737 (16.4%) GO:0005739 (0.3%)" "GO:0000049 (16.7%) GO:0004818 (16.7%) GO:0005524 (16.7%)" glutamyl-tRNA aminoacylation (16.7%) "cytoplasm (16.4%) mitochondrion (0.3%)" "tRNA binding (16.7%) glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR000924 (10.6%) IPR004527 (10.6%) IPR008925 (10.6%)" "Glutamyl/glutaminyl-tRNA synthetase (10.6%) Glutamate-tRNA ligase, bacterial/mitochondrial (10.6%) Aminoacyl-tRNA synthetase, class I, anticodon-binding superfamily (10.6%)" FLSAPEAVEYGLVDSILTHRN Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.4.21.92 (100%) endopeptidase Clp (100%) "GO:0006515 (16.5%) GO:0006508 (0.2%) GO:0009266 (0%)" "GO:0009368 (16.5%) GO:0005737 (16.4%) GO:0005829 (0%)" "GO:0004176 (16.5%) GO:0004252 (16.5%) GO:0051117 (16.5%)" "protein quality control for misfolded or incompletely synthesized proteins (16.5%) proteolysis (0.2%) response to temperature stimulus (0%)" "endopeptidase Clp complex (16.5%) cytoplasm (16.4%) cytosol (0%)" "ATP-dependent peptidase activity (16.5%) serine-type endopeptidase activity (16.5%) ATPase binding (16.5%)" "IPR023562 (20.1%) IPR029045 (20.1%) IPR001907 (20%)" "Clp protease proteolytic subunit /Translocation-enhancing protein TepA (20.1%) ClpP/crotonase-like domain superfamily (20.1%) ATP-dependent Clp protease proteolytic subunit (20%)" VAGEDIQVSAPTTAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0000917 (14.3%) GO:0043093 (14.3%) GO:0051258 (14.3%)" "GO:0005737 (14.3%) GO:0032153 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%)" "division septum assembly (14.3%) FtsZ-dependent cytokinesis (14.3%) protein polymerization (14.3%)" "cytoplasm (14.3%) cell division site (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" LYDTYEVLHKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (50%) GO:0003824 (20.5%) GO:0043758 (15.9%)" "ATP binding (50%) catalytic activity (20.5%) acetate-CoA ligase (ADP-forming) activity (15.9%)" "IPR013815 (19.3%) IPR003781 (18.4%) IPR016102 (18.4%)" "ATP-grasp fold, subdomain 1 (19.3%) CoA-binding (18.4%) Succinyl-CoA synthetase-like (18.4%)" LTNSTQGVLEER Bacteria Bacteria "2.5.1.49 (85.7%) 4.2.99.10 (14.3%)" "O-acetylhomoserine aminocarboxypropyltransferase (85.7%) Transferred entry: 2.5.1.49 (14.3%)" "GO:0006535 (13.7%) GO:0019346 (13.7%) GO:0071269 (13.7%)" GO:0005737 (13.7%) "GO:0003961 (13.7%) GO:0004124 (13.7%) GO:0030170 (13.7%)" "cysteine biosynthetic process from serine (13.7%) transsulfuration (13.7%) L-homocysteine biosynthetic process (13.7%)" cytoplasm (13.7%) "O-acetylhomoserine aminocarboxypropyltransferase activity (13.7%) cysteine synthase activity (13.7%) pyridoxal phosphate binding (13.7%)" "IPR000277 (16.7%) IPR006235 (16.7%) IPR015421 (16.7%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (16.7%) O-acetylhomoserine/O-acetylserine sulfhydrylase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" HYPGDGVVTGYGTIEGR NMVINENYPHSMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GQIGGELCEMPLER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0045259 (19.4%) GO:0005886 (18.4%)" "GO:0005524 (19.4%) GO:0043531 (19.4%) GO:0046933 (19.4%)" "proton-transporting ATP synthase complex (19.4%) plasma membrane (18.4%)" "ATP binding (19.4%) ADP binding (19.4%) proton-transporting ATP synthase activity, rotational mechanism (19.4%)" "IPR000194 (10%) IPR000793 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) ATP synthase, alpha subunit, C-terminal (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" IVYAYAEATVPK Bacteria Bacteria "6.-.-.- (42.9%) 6.4.1.3 (42.9%) 6.4.1.2 (14.3%)" "Ligases (42.9%) propionyl-CoA carboxylase (42.9%) acetyl-CoA carboxylase (14.3%)" "GO:0015977 (21.1%) GO:0006633 (0.2%)" GO:0009317 (21.1%) "GO:0004658 (26.7%) GO:0003989 (21.2%) GO:0016740 (9.8%)" "carbon fixation (21.1%) fatty acid biosynthetic process (0.2%)" acetyl-CoA carboxylase complex (21.1%) "propionyl-CoA carboxylase activity (26.7%) acetyl-CoA carboxylase activity (21.2%) transferase activity (9.8%)" "IPR011763 (20.3%) IPR029045 (20.3%) IPR034733 (20.3%)" "Acetyl-coenzyme A carboxyltransferase, C-terminal (20.3%) ClpP/crotonase-like domain superfamily (20.3%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.3%)" NNSGRDVMLDAPGVLDPAQLDELNLIVDIKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.12 (100%) aspartate--tRNA ligase (100%) GO:0006422 (20%) GO:0005737 (20%) "GO:0003676 (20%) GO:0004815 (20%) GO:0005524 (20%)" aspartyl-tRNA aminoacylation (20%) cytoplasm (20%) "nucleic acid binding (20%) aspartate-tRNA ligase activity (20%) ATP binding (20%)" "IPR002312 (9.1%) IPR004115 (9.1%) IPR004364 (9.1%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.1%) GAD-like domain superfamily (9.1%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.1%)" SLVIHPATTTHSQLNAQELEEQGIKPGTVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.2.99.10 (100%) Transferred entry: 2.5.1.49 (100%) "GO:0006535 (13.8%) GO:0019346 (13.8%) GO:0071269 (13.8%)" GO:0005737 (13.8%) "GO:0003961 (13.8%) GO:0004124 (13.8%) GO:0030170 (13.8%)" "cysteine biosynthetic process from serine (13.8%) transsulfuration (13.8%) L-homocysteine biosynthetic process (13.8%)" cytoplasm (13.8%) "O-acetylhomoserine aminocarboxypropyltransferase activity (13.8%) cysteine synthase activity (13.8%) pyridoxal phosphate binding (13.8%)" "IPR000277 (16.7%) IPR006235 (16.7%) IPR015421 (16.7%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (16.7%) O-acetylhomoserine/O-acetylserine sulfhydrylase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" HEAYAEDAFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.1.1.191 (87.5%) 2.1.1.- (12.5%)" "23S rRNA (cytosine(1962)-C(5))-methyltransferase (87.5%) Methyltransferases (12.5%)" "GO:0032259 (20.4%) GO:0006364 (19.8%)" GO:0005737 (19.8%) "GO:0008168 (20.4%) GO:0003723 (19.8%)" "methylation (20.4%) rRNA processing (19.8%)" cytoplasm (19.8%) "methyltransferase activity (20.4%) RNA binding (19.8%)" "IPR019614 (17%) IPR029063 (17%) IPR002478 (16.5%)" "S-adenosylmethionine-dependent methyltransferase (17%) S-adenosyl-L-methionine-dependent methyltransferase superfamily (17%) PUA domain (16.5%)" AGGGSATLSMGQAAAR root "1.1.1.37 (99.9%) 1.-.-.- (0.1%) 1.1.1.- (0.1%)" "malate dehydrogenase (99.9%) Oxidoreductases (0.1%) With NAD(+) or NADP(+) as acceptor (0.1%)" "GO:0006099 (24.9%) GO:0006108 (23.8%) GO:0019752 (0.9%)" "GO:0005737 (25.1%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0030060 (25.1%) GO:0016491 (0.1%) GO:0016615 (0%)" "tricarboxylic acid cycle (24.9%) malate metabolic process (23.8%) carboxylic acid metabolic process (0.9%)" "cytoplasm (25.1%) cytosol (0%) membrane (0%)" "L-malate dehydrogenase (NAD+) activity (25.1%) oxidoreductase activity (0.1%) malate dehydrogenase activity (0%)" "IPR022383 (13.4%) IPR015955 (13.4%) IPR036291 (13.2%)" "Lactate/malate dehydrogenase, C-terminal (13.4%) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (13.4%) NAD(P)-binding domain superfamily (13.2%)" IGKLPISIPAGVTVTLKDDVVTVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0002181 (24.8%) "GO:0022625 (24.8%) GO:0005840 (0.7%)" "GO:0003735 (24.8%) GO:0019843 (24.8%)" cytoplasmic translation (24.8%) "cytosolic large ribosomal subunit (24.8%) ribosome (0.7%)" "structural constituent of ribosome (24.8%) rRNA binding (24.8%)" "IPR000702 (20%) IPR002358 (20%) IPR019906 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, conserved site (20%) Large ribosomal subunit protein uL6, bacteria (20%)" SESYGQLMDAATGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.14.12 (100%) Xaa-Xaa-Pro tripeptidyl-peptidase (100%) GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001375 (33.3%) IPR011042 (33.3%) IPR029058 (33.3%)" "Peptidase S9, prolyl oligopeptidase, catalytic domain (33.3%) Six-bladed beta-propeller, TolB-like (33.3%) Alpha/Beta hydrolase fold (33.3%)" NLDDRETVTVYTGEASFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.16.1.1 (100%) mercury(II) reductase (100%) "GO:0003955 (30.2%) GO:0016668 (30.2%) GO:0050660 (30.2%)" "NAD(P)H dehydrogenase (quinone) activity (30.2%) oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (30.2%) flavin adenine dinucleotide binding (30.2%)" "IPR001100 (16.7%) IPR004099 (16.7%) IPR012999 (16.7%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (16.7%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (16.7%) Pyridine nucleotide-disulphide oxidoreductase, class I, active site (16.7%)" EHDLISVVGLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" DCNSAQKYWHFIK root 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.4%) GO:0006002 (13.8%)" GO:0005829 (14.4%) "GO:0003872 (14.4%) GO:0005524 (14.4%) GO:0046872 (14.4%)" "response to glucose (14.4%) fructose 6-phosphate metabolic process (13.8%)" cytosol (14.4%) "6-phosphofructokinase activity (14.4%) ATP binding (14.4%) metal ion binding (14.4%)" "IPR000023 (25.2%) IPR011183 (25.2%) IPR035966 (25.2%)" "Phosphofructokinase domain (25.2%) Pyrophosphate-dependent phosphofructokinase PfpB (25.2%) Phosphofructokinase superfamily (25.2%)" VNPVIPEVMNQICYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.2%) IPR008948 (14.2%) IPR018951 (14.2%)" "Fumarate lyase family (14.2%) L-Aspartase-like (14.2%) Fumarase C, C-terminal (14.2%)" KFGEGIFGADKVLSKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (19.9%) GO:0042274 (19.9%)" "GO:0015935 (19.9%) GO:0005840 (0.3%)" "GO:0019843 (20.1%) GO:0003735 (19.9%)" "translation (19.9%) ribosomal small subunit biogenesis (19.9%)" "small ribosomal subunit (19.9%) ribosome (0.3%)" "rRNA binding (20.1%) structural constituent of ribosome (19.9%)" "IPR001912 (16.8%) IPR002942 (16.6%) IPR005709 (16.6%)" "Small ribosomal subunit protein uS4, N-terminal (16.8%) RNA-binding S4 domain (16.6%) Small ribosomal subunit protein uS4, bacteria (16.6%)" DLLPILEPTVQSGRPLLIIAEDIDSEALATLVVNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (18.2%) GO:0005737 (13.6%) "GO:0005524 (18.2%) GO:0016853 (18.2%) GO:0140662 (18.2%)" protein refolding (18.2%) cytoplasm (13.6%) "ATP binding (18.2%) isomerase activity (18.2%) ATP-dependent protein folding chaperone (18.2%)" "IPR001844 (17.8%) IPR002423 (17.8%) IPR027409 (17.8%)" "Chaperonin Cpn60/GroEL (17.8%) Chaperonin Cpn60/GroEL/TCP-1 family (17.8%) GroEL-like apical domain superfamily (17.8%)" VVNDNTPQAAKEPDYLDIPAFLRK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0000917 (14%) GO:0043093 (13.9%) GO:0051258 (13.9%)" "GO:0005737 (14.4%) GO:0032153 (14.4%)" "GO:0005525 (14.5%) GO:0003924 (14.4%)" "division septum assembly (14%) FtsZ-dependent cytokinesis (13.9%) protein polymerization (13.9%)" "cytoplasm (14.4%) cell division site (14.4%)" "GTP binding (14.5%) GTPase activity (14.4%)" "IPR008280 (11.2%) IPR037103 (11.2%) IPR024757 (11.2%)" "Tubulin/FtsZ, C-terminal (11.2%) Tubulin/FtsZ-like, C-terminal domain (11.2%) Cell division protein FtsZ, C-terminal (11.2%)" SGYVGNIIPR root "3.2.1.22 (42.5%) 3.2.1.20 (22.5%) 3.2.1.3 (20%)" "alpha-galactosidase (42.5%) alpha-glucosidase (22.5%) glucan 1,4-alpha-glucosidase (20%)" GO:0005983 (0.2%) "GO:0005886 (0.2%) GO:0042597 (0.2%)" "GO:0030246 (57%) GO:0016787 (36.1%) GO:0004557 (2.9%)" starch catabolic process (0.2%) "plasma membrane (0.2%) periplasmic space (0.2%)" "carbohydrate binding (57%) hydrolase activity (36.1%) alpha-galactosidase activity (2.9%)" "IPR019563 (14.4%) IPR052720 (14.4%) IPR013785 (14.3%)" "Glycosyl-hydrolase 97, catalytic domain (14.4%) Glycosyl Hydrolase Family 97 (14.4%) Aldolase-type TIM barrel (14.3%)" AAGVSVITDGGAPGAGATIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0044718 (2.7%) GO:0009279 (94.6%) GO:0015344 (2.7%) siderophore transmembrane transport (2.7%) cell outer membrane (94.6%) siderophore uptake transmembrane transporter activity (2.7%) "IPR008969 (12.3%) IPR012910 (12.3%) IPR023996 (12.3%)" "Carboxypeptidase-like, regulatory domain superfamily (12.3%) TonB-dependent receptor, plug domain (12.3%) TonB-dependent outer membrane protein, SusC/RagA (12.3%)" QLDGLGPNGETIMDYSIFDAIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016740 (100%) transferase activity (100%) "IPR029044 (97.4%) IPR005835 (2.6%)" "Nucleotide-diphospho-sugar transferases (97.4%) Nucleotidyl transferase domain (2.6%)" FNDSGIVGCLTVTPYYNRPSQEGLYQHFK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "4.3.3.7 (99%) 4.2.1.52 (1%)" "4-hydroxy-tetrahydrodipicolinate synthase (99%) Transferred entry: 4.3.3.7 (1%)" "GO:0009089 (24.4%) GO:0019877 (24.4%) GO:0044281 (0.2%)" GO:0005829 (24.9%) "GO:0008840 (24.9%) GO:0016829 (1%) GO:0042802 (0.2%)" "lysine biosynthetic process via diaminopimelate (24.4%) diaminopimelate biosynthetic process (24.4%) small molecule metabolic process (0.2%)" cytosol (24.9%) "4-hydroxy-tetrahydrodipicolinate synthase activity (24.9%) lyase activity (1%) identical protein binding (0.2%)" "IPR002220 (20.3%) IPR013785 (20.3%) IPR005263 (19.9%)" "DapA-like (20.3%) Aldolase-type TIM barrel (20.3%) 4-hydroxy-tetrahydrodipicolinate synthase, DapA (19.9%)" VSMTNELAYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" KTGAAIHPGYGFLSENADFAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.3.4.14 (80.3%) 6.4.1.7 (12.1%) 6.4.1.1 (4.5%)" "biotin carboxylase (80.3%) 2-oxoglutarate carboxylase (12.1%) pyruvate carboxylase (4.5%)" GO:2001295 (17.8%) "GO:0005524 (21.7%) GO:0046872 (21.4%) GO:0003989 (17.5%)" malonyl-CoA biosynthetic process (17.8%) "ATP binding (21.7%) metal ion binding (21.4%) acetyl-CoA carboxylase activity (17.5%)" "IPR005479 (12.6%) IPR005481 (12.6%) IPR011764 (12.6%)" "Carbamoyl phosphate synthase, ATP-binding domain (12.6%) Biotin carboxylase-like, N-terminal domain (12.6%) Biotin carboxylation domain (12.6%)" ATIGSVGNSDHGLESSGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0002181 (20%) "GO:0015934 (20%) GO:0005840 (0.2%)" "GO:0003735 (20%) GO:0016740 (20%) GO:0019843 (19.3%)" cytoplasmic translation (20%) "large ribosomal subunit (20%) ribosome (0.2%)" "structural constituent of ribosome (20%) transferase activity (20%) rRNA binding (19.3%)" "IPR002171 (11.1%) IPR005880 (11.1%) IPR008991 (11.1%)" "Large ribosomal subunit protein uL2 (11.1%) Large ribosomal subunit protein uL2, bacteria/organella (11.1%) Translation protein SH3-like domain superfamily (11.1%)" AIEKDPMTAYVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.14.- (100%) Dipeptidyl-peptidases and tripeptidyl-peptidases (100%) "GO:0006508 (25%) GO:0043171 (25%)" "GO:0008239 (25%) GO:0070009 (25%)" "proteolysis (25%) peptide catabolic process (25%)" "dipeptidyl-peptidase activity (25%) serine-type aminopeptidase activity (25%)" "IPR009003 (33.3%) IPR019500 (33.3%) IPR043504 (33.3%)" "Peptidase S1, PA clan (33.3%) Peptidase S46 (33.3%) Peptidase S1, PA clan, chymotrypsin-like fold (33.3%)" NAADAAEAIGIGLQAFCIPGSVADDRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR025964 (100%) GGGtGRT protein (100%) AYNKSDLVSK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0030261 (24.6%) GO:0005829 (25.1%) "GO:0003677 (25.3%) GO:0030527 (25.1%)" chromosome condensation (24.6%) cytosol (25.1%) "DNA binding (25.3%) structural constituent of chromatin (25.1%)" "IPR000119 (50%) IPR010992 (50%)" "Histone-like DNA-binding protein (50%) Integration host factor (IHF)-like DNA-binding domain superfamily (50%)" GKGNPEGFVAPVTPGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20.1%) GO:0022625 (20.1%) "GO:0003735 (20.1%) GO:0019843 (20.1%) GO:0000049 (19.7%)" translation (20.1%) cytosolic large ribosomal subunit (20.1%) "structural constituent of ribosome (20.1%) rRNA binding (20.1%) tRNA binding (19.7%)" "IPR000114 (20%) IPR016180 (20%) IPR020798 (20%)" "Large ribosomal subunit protein uL16, bacteria (20%) Large ribosomal subunit protein uL16 domain (20%) Large ribosomal subunit protein uL16, conserved site (20%)" FSDSREFDVLTWR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033104 (100%) type VI protein secretion system complex (100%) IPR041408 (100%) Hemolysin coregulated protein (Hcp) TssD (100%) SSTSGSLEQYQNPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR024311 (25%) IPR025112 (25%) IPR032186 (25%)" "Lipocalin-like domain (25%) Putative carbohydrate metabolism domain (25%) Domain of unknown function DUF5018 (25%)" GYHIILIKPDIFVSTR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.148 (100%) 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (100%) "GO:0016114 (25%) GO:0019288 (25%)" "GO:0005524 (25%) GO:0050515 (25%)" "terpenoid biosynthetic process (25%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (25%)" "ATP binding (25%) 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity (25%)" "IPR004424 (16.8%) IPR006204 (16.8%) IPR014721 (16.8%)" "4-diphosphocytidyl-2C-methyl-D-erythritol kinase (16.8%) GHMP kinase N-terminal domain (16.8%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (16.8%)" MEQGPLTGSYAR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0032790 (25.2%) "GO:0003746 (25.3%) GO:0005525 (25.2%) GO:0003924 (24.2%)" ribosome disassembly (25.2%) "translation elongation factor activity (25.3%) GTP binding (25.2%) GTPase activity (24.2%)" "IPR000640 (7.7%) IPR005517 (7.7%) IPR014721 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translation elongation factor EFG/EF2, domain IV (7.7%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (7.7%)" HNYSIVDEVDSVLIDDAR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (10.1%) GO:0004386 (0.9%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (10.1%) helicase activity (0.9%)" "IPR000185 (7.8%) IPR001650 (7.8%) IPR011115 (7.8%)" "Protein translocase subunit SecA (7.8%) Helicase, C-terminal domain-like (7.8%) SecA DEAD-like, N-terminal (7.8%)" VCLDAVLAAIDEVKDEEWMK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.6%) GO:0006044 (32.6%)" "GO:0004342 (32.6%) GO:0016853 (2.3%)" "carbohydrate metabolic process (32.6%) N-acetylglucosamine metabolic process (32.6%)" "glucosamine-6-phosphate deaminase activity (32.6%) isomerase activity (2.3%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" TNELVGNLFDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) GVLGYTEDAVVSTDFR Pseudomonadati Bacteria Pseudomonadati "1.2.1.- (94.1%) 1.2.1.12 (5.9%)" "With NAD(+) or NADP(+) as acceptor (94.1%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (5.9%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (11.5%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (11.5%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" KNDVTGSVMAIDADK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.5%) IPR008969 (12.5%) IPR012910 (12.5%)" "TonB-dependent receptor-like, beta-barrel (12.5%) Carboxypeptidase-like, regulatory domain superfamily (12.5%) TonB-dependent receptor, plug domain (12.5%)" AYCPYDFSALR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.-.- (100%) Acting on peptide bonds (peptidases) (100%) GO:0006508 (33.3%) "GO:0016805 (33.3%) GO:0070004 (33.3%)" proteolysis (33.3%) "dipeptidase activity (33.3%) cysteine-type exopeptidase activity (33.3%)" IPR005322 (100%) Peptidase C69 (100%) ATLGEISYACEQIVGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20.4%) GO:0005737 (20.4%) "GO:0004494 (20.4%) GO:0031419 (20.4%) GO:0046872 (18.6%)" propionate metabolic process, methylmalonyl pathway (20.4%) cytoplasm (20.4%) "methylmalonyl-CoA mutase activity (20.4%) cobalamin binding (20.4%) metal ion binding (18.6%)" "IPR006099 (17.7%) IPR016176 (17.7%) IPR006098 (16.2%)" "Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (17.7%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (17.7%) Methylmalonyl-CoA mutase, alpha chain, catalytic (16.2%)" IEGEPEEGEIVDVYTSKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.1.- (80%) 2.1.1.191 (20%)" "Methyltransferases (80%) 23S rRNA (cytosine(1962)-C(5))-methyltransferase (20%)" "GO:0006364 (20%) GO:0032259 (20%)" GO:0005737 (20%) "GO:0003723 (20%) GO:0008168 (20%)" "rRNA processing (20%) methylation (20%)" cytoplasm (20%) "RNA binding (20%) methyltransferase activity (20%)" "IPR002478 (16.7%) IPR015947 (16.7%) IPR019614 (16.7%)" "PUA domain (16.7%) PUA-like superfamily (16.7%) S-adenosylmethionine-dependent methyltransferase (16.7%)" TIHDSYEANLTTQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.39 (100%) glycerol-3-phosphate cytidylyltransferase (100%) "GO:0016779 (80%) GO:0047348 (20%)" "nucleotidyltransferase activity (80%) glycerol-3-phosphate cytidylyltransferase activity (20%)" "IPR004821 (33.3%) IPR014729 (33.3%) IPR050385 (33.3%)" "Cytidyltransferase-like domain (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (33.3%) Archaeal FAD synthase (33.3%)" SVANAEQMDR root "GO:0045893 (18.9%) GO:0006355 (1.1%) GO:0000160 (0.3%)" "GO:0005829 (19.9%) GO:0032993 (19.9%) GO:0005737 (0%)" "GO:0000976 (19.9%) GO:0000156 (19.9%) GO:0003677 (0.1%)" "positive regulation of DNA-templated transcription (18.9%) regulation of DNA-templated transcription (1.1%) phosphorelay signal transduction system (0.3%)" "cytosol (19.9%) protein-DNA complex (19.9%) cytoplasm (0%)" "transcription cis-regulatory region binding (19.9%) phosphorelay response regulator activity (19.9%) DNA binding (0.1%)" "IPR001789 (17.1%) IPR011006 (17.1%) IPR039420 (16.9%)" "Signal transduction response regulator, receiver domain (17.1%) CheY-like superfamily (17.1%) Transcriptional regulatory protein WalR-like (16.9%)" ALADANLSTSDIDEVILVGGSTR Sodaliphilus pleomorphus Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Sodaliphilus Sodaliphilus pleomorphus "GO:0005524 (33.3%) GO:0051082 (33.3%) GO:0140662 (33.3%)" "ATP binding (33.3%) unfolded protein binding (33.3%) ATP-dependent protein folding chaperone (33.3%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" VAVFTQGANAEAAK root "GO:0006417 (16.6%) GO:0006412 (16.6%) GO:0000027 (0%)" "GO:0022625 (16.7%) GO:0005840 (0.2%) GO:0005737 (0%)" "GO:0000049 (16.6%) GO:0003735 (16.6%) GO:0019843 (16.6%)" "regulation of translation (16.6%) translation (16.6%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (16.7%) ribosome (0.2%) cytoplasm (0%)" "tRNA binding (16.6%) structural constituent of ribosome (16.6%) rRNA binding (16.6%)" "IPR028364 (16.8%) IPR023674 (16.7%) IPR023673 (16.7%)" "Ribosomal protein uL1/ribosomal biogenesis protein (16.8%) Ribosomal protein uL1-like (16.7%) Large ribosomal subunit protein uL1, conserved site (16.7%)" VVINVFPSLDTSVCAASVRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.11.1.24 (90%) 1.11.1.15 (10%)" "thioredoxin-dependent peroxiredoxin (90%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (10%)" GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" ATQNELETTFNEAQEGIEAAAVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.-.- (100%) Acting on peptide bonds (peptidases) (100%) GO:0006508 (32.6%) "GO:0016805 (34.9%) GO:0070004 (32.6%)" proteolysis (32.6%) "dipeptidase activity (34.9%) cysteine-type exopeptidase activity (32.6%)" IPR005322 (100%) Peptidase C69 (100%) SNRPTDEANGCGYEVNEVLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (51.2%) IPR041662 (48.8%)" "Tetratricopeptide-like helical domain superfamily (51.2%) SusD-like 2 (48.8%)" TWPTTWFVPR Bacteria Bacteria 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.6%) GO:0042355 (16.6%)" GO:0005737 (16.6%) "GO:0008736 (16.6%) GO:0008790 (16.6%) GO:0030145 (16.6%)" "D-arabinose catabolic process (16.6%) L-fucose catabolic process (16.6%)" cytoplasm (16.6%) "L-fucose isomerase activity (16.6%) arabinose isomerase activity (16.6%) manganese ion binding (16.6%)" "IPR004216 (11.2%) IPR005763 (11.2%) IPR015888 (11.2%)" "L-fucose/L-arabinose isomerase, C-terminal (11.2%) L-fucose isomerase (11.2%) L-fucose isomerase, C-terminal (11.2%)" YKLELTNPTVDEVAGWIAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.8%) GO:0005829 (16.8%) "GO:0000049 (16.8%) GO:0004824 (16.8%) GO:0005524 (16.8%)" lysyl-tRNA aminoacylation (16.8%) cytosol (16.8%) "tRNA binding (16.8%) lysine-tRNA ligase activity (16.8%) ATP binding (16.8%)" "IPR004364 (13%) IPR006195 (13%) IPR002313 (12.4%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (13%) Aminoacyl-tRNA synthetase, class II (13%) Lysine-tRNA ligase, class II (12.4%)" EYVVQDGDIMHFR Bacteria Bacteria GO:0005737 (20.2%) "GO:0005524 (20.2%) GO:0016887 (20.2%) GO:0005525 (19.9%)" cytoplasm (20.2%) "ATP binding (20.2%) ATP hydrolysis activity (20.2%) GTP binding (19.9%)" "IPR004095 (10.1%) IPR013029 (10.1%) IPR012675 (10%)" "TGS (10.1%) YchF, C-terminal domain (10.1%) Beta-grasp domain superfamily (10%)" INQLLEEVGALK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002319 (14.3%) IPR004188 (14.3%) IPR004529 (14.3%)" "Phenylalanyl-tRNA synthetase (14.3%) Phenylalanine-tRNA ligase, class II, N-terminal (14.3%) Phenylalanyl-tRNA synthetase, class IIc, alpha subunit (14.3%)" MNKADLISAVAAEAGLSKVDAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0030261 (11.9%) GO:0006270 (10.4%) GO:0006351 (10.4%)" "GO:0005829 (11.9%) GO:1990103 (10.4%) GO:1990178 (10.4%)" "GO:0003677 (11.9%) GO:0030527 (11.9%) GO:0042802 (10.4%)" "chromosome condensation (11.9%) DNA replication initiation (10.4%) DNA-templated transcription (10.4%)" "cytosol (11.9%) DnaA-HU complex (10.4%) HU-DNA complex (10.4%)" "DNA binding (11.9%) structural constituent of chromatin (11.9%) identical protein binding (10.4%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" AAEAAAKAEAEAANAPAEEAPAAEATEAPAEA Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" TYLCDGGTGERFDQPATVGVTYMLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.9%) IPR007121 (7.9%) IPR007645 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) RNA polymerase, beta subunit, conserved site (7.9%) RNA polymerase Rpb2, domain 3 (7.9%)" YNAPYNASYPAQGDKTLTDGIR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) "GO:0005975 (25%) GO:0030203 (25%)" GO:0016020 (25%) GO:0004563 (25%) "carbohydrate metabolic process (25%) glycosaminoglycan metabolic process (25%)" membrane (25%) beta-N-acetylhexosaminidase activity (25%) "IPR015882 (20%) IPR015883 (20%) IPR017853 (20%)" "Beta-hexosaminidase, bacterial type, N-terminal (20%) Glycoside hydrolase family 20, catalytic domain (20%) Glycoside hydrolase superfamily (20%)" AVAAAVAGMSQEAIAELEKNGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.4%) GO:0005737 (14.4%) "GO:0000049 (14.4%) GO:0004822 (14.4%) GO:0005524 (14.4%)" isoleucyl-tRNA aminoacylation (14.4%) cytoplasm (14.4%) "tRNA binding (14.4%) isoleucine-tRNA ligase activity (14.4%) ATP binding (14.4%)" "IPR002300 (12.7%) IPR002301 (12.7%) IPR013155 (12.7%)" "Aminoacyl-tRNA synthetase, class Ia (12.7%) Isoleucine-tRNA ligase (12.7%) Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding (12.7%)" INVIGNGVVLDPILFKEEAESLAASGHDLTK MMDYDDYITDPAIAELREK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003439 (20%) IPR003593 (20%) IPR027417 (20%)" "ABC transporter-like, ATP-binding domain (20%) AAA+ ATPase domain (20%) P-loop containing nucleoside triphosphate hydrolase (20%)" LIDQATAEIVETAK root "GO:0006412 (19%) GO:0000028 (0.2%) GO:0002181 (0.2%)" "GO:0005840 (21%) GO:1990904 (18.8%) GO:0022627 (0.4%)" "GO:0003735 (19.2%) GO:0000049 (18.8%) GO:0001072 (0.2%)" "translation (19%) ribosomal small subunit assembly (0.2%) cytoplasmic translation (0.2%)" "ribosome (21%) ribonucleoprotein complex (18.8%) cytosolic small ribosomal subunit (0.4%)" "structural constituent of ribosome (19.2%) tRNA binding (18.8%) transcription antitermination factor activity, RNA binding (0.2%)" "IPR027486 (24.8%) IPR036838 (24.8%) IPR001848 (24.5%)" "Small ribosomal subunit protein uS10 domain (24.8%) Small ribosomal subunit protein uS10 domain superfamily (24.8%) Small ribosomal subunit protein uS10 (24.5%)" NSGAQLYGVNSIPHTVLVDKDGTIIAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0017004 (25%) GO:0030313 (25%) "GO:0016209 (25%) GO:0016491 (25%)" cytochrome complex assembly (25%) cell envelope (25%) "antioxidant activity (25%) oxidoreductase activity (25%)" "IPR000866 (16.7%) IPR013766 (16.7%) IPR017937 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Thioredoxin, conserved site (16.7%)" LVADLLSVAGIDR Pseudomonadati Bacteria Pseudomonadati 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (19.3%) IPR005946 (19.3%) IPR029057 (19.3%)" "Phosphoribosyltransferase domain (19.3%) Ribose-phosphate pyrophosphokinase (19.3%) Phosphoribosyltransferase-like (19.3%)" FTKPYTSEAAPYFYER Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0046813 (43.5%) GO:0006508 (6.5%)" GO:0009279 (43.5%) GO:0008233 (6.5%) "receptor-mediated virion attachment to host cell (43.5%) proteolysis (6.5%)" cell outer membrane (43.5%) peptidase activity (6.5%) "IPR019734 (25.9%) IPR050498 (25.9%) IPR011990 (25%)" "Tetratricopeptide repeat (25.9%) Photosystem I assembly protein Ycf3 (25.9%) Tetratricopeptide-like helical domain superfamily (25%)" EYKKGDEIAAVVLQVDAERER root "GO:0006412 (24.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.7%) GO:0005840 (0.4%) GO:1990904 (0.1%)" "GO:0003735 (24.8%) GO:0003729 (24.8%) GO:0016491 (0.1%)" "translation (24.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.7%) ribosome (0.4%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.8%) mRNA binding (24.8%) oxidoreductase activity (0.1%)" "IPR003029 (20.2%) IPR012340 (20.2%) IPR050437 (20.2%)" "S1 domain (20.2%) Nucleic acid-binding, OB-fold (20.2%) Small ribosomal subunit protein bS1-like (20.2%)" VKPGGILIYDGYGIINPPTRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.1 (50%) 1.2.7.3 (50%)" "pyruvate synthase (50%) 2-oxoglutarate synthase (50%)" "GO:0016903 (68%) GO:0019164 (16%) GO:0047553 (16%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (68%) pyruvate synthase activity (16%) 2-oxoglutarate synthase activity (16%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" KGIGVPELMEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (24.9%) "GO:0003743 (25.4%) GO:0003924 (24.9%) GO:0005525 (24.9%)" cytoplasm (24.9%) "translation initiation factor activity (25.4%) GTPase activity (24.9%) GTP binding (24.9%)" "IPR000178 (9.1%) IPR000795 (9.1%) IPR005225 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translational (tr)-type GTP-binding domain (9.1%) Small GTP-binding domain (9.1%)" SSMKEEDQPFMTVSIKADKETK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0015031 (33.3%) GO:0005886 (33.3%) GO:0022857 (33.3%) protein transport (33.3%) plasma membrane (33.3%) transmembrane transporter activity (33.3%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) FLNDMFDKGLIER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.3%) GO:0005737 (19.2%) "GO:0005524 (20.3%) GO:0004816 (20.1%) GO:0003676 (19.8%)" asparaginyl-tRNA aminoacylation (20.3%) cytoplasm (19.2%) "ATP binding (20.3%) asparagine-tRNA ligase activity (20.1%) nucleic acid binding (19.8%)" "IPR004364 (14.4%) IPR045864 (14.4%) IPR002312 (14.3%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (14.4%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.4%) Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.3%)" QLSLDRDPHGNVQVSLIETEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.3%) GO:0006002 (14.1%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0047334 (14.3%) GO:0005524 (14.2%)" "response to glucose (14.3%) fructose 6-phosphate metabolic process (14.1%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) diphosphate-fructose-6-phosphate 1-phosphotransferase activity (14.3%) ATP binding (14.2%)" "IPR035966 (25.2%) IPR000023 (25%) IPR011183 (25%)" "Phosphofructokinase superfamily (25.2%) Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%)" FKVGPVPIFYSPYLQLPVGDK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0015920 (24.7%) GO:0043165 (24.7%) GO:0061024 (0.3%)" "GO:0009279 (25.2%) GO:1990351 (25.2%)" "lipopolysaccharide transport (24.7%) Gram-negative-bacterium-type cell outer membrane assembly (24.7%) membrane organization (0.3%)" "cell outer membrane (25.2%) transporter complex (25.2%)" "IPR050218 (25.2%) IPR005653 (25%) IPR007543 (25%)" "Lipopolysaccharide Assembly Protein LptD (25.2%) Organic solvent tolerance-like, N-terminal (25%) LptD, C-terminal (25%)" NVTAGANPMDLK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (20.1%) GO:0009408 (0.1%) GO:0051085 (0%)" "GO:0005737 (11.7%) GO:0009986 (0.1%) GO:0042603 (0.1%)" "GO:0005524 (20.1%) GO:0140662 (20.1%) GO:0016853 (15.7%)" "protein refolding (20.1%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (11.7%) cell surface (0.1%) capsule (0.1%)" "ATP binding (20.1%) ATP-dependent protein folding chaperone (20.1%) isomerase activity (15.7%)" "IPR001844 (17.9%) IPR002423 (17.9%) IPR027413 (17.8%)" "Chaperonin Cpn60/GroEL (17.9%) Chaperonin Cpn60/GroEL/TCP-1 family (17.9%) GroEL-like equatorial domain superfamily (17.8%)" TIPAFEMYTEVLQDAVVDLIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.8.3.- (80%) 3.1.2.1 (20%)" "CoA-transferases (80%) acetyl-CoA hydrolase (20%)" "GO:0006083 (25.3%) GO:0006084 (24%)" "GO:0003986 (25.3%) GO:0008775 (25.3%)" "acetate metabolic process (25.3%) acetyl-CoA metabolic process (24%)" "acetyl-CoA hydrolase activity (25.3%) acetate CoA-transferase activity (25.3%)" "IPR026888 (17%) IPR037171 (17%) IPR038460 (17%)" "Acetyl-CoA hydrolase/transferase, C-terminal domain (17%) NagB/RpiA transferase-like (17%) Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily (17%)" AIVEAAGLKVGDIVK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "3.5.4.- (86.4%) 3.5.99.10 (12.1%) 2.5.1.7 (1.5%)" "In cyclic amidines (86.4%) 2-iminobutanoate/2-iminopropanoate deaminase (12.1%) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (1.5%)" "GO:0009097 (0.4%) GO:0009636 (0.4%) GO:0070207 (0.1%)" "GO:0005829 (49.1%) GO:0016020 (0.1%) GO:0032991 (0.1%)" "GO:0019239 (48.7%) GO:0120242 (0.4%) GO:0120243 (0.4%)" "isoleucine biosynthetic process (0.4%) response to toxic substance (0.4%) protein homotrimerization (0.1%)" "cytosol (49.1%) membrane (0.1%) protein-containing complex (0.1%)" "deaminase activity (48.7%) 2-iminobutanoate deaminase activity (0.4%) 2-iminopropanoate deaminase activity (0.4%)" "IPR006175 (25.2%) IPR035959 (25.2%) IPR006056 (25.1%)" "YjgF/YER057c/UK114 family (25.2%) RutC-like superfamily (25.2%) RidA family (25.1%)" IADKFFCDEEINR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006207 (20.6%) GO:0006221 (20.6%)" GO:0009347 (20.6%) "GO:0046872 (20.6%) GO:0016740 (17.7%)" "'de novo' pyrimidine nucleobase biosynthetic process (20.6%) pyrimidine nucleotide biosynthetic process (20.6%)" aspartate carbamoyltransferase complex (20.6%) "metal ion binding (20.6%) transferase activity (17.7%)" "IPR002801 (20%) IPR020542 (20%) IPR020545 (20%)" "Aspartate transcarbamylase regulatory subunit (20%) Aspartate carbamoyltransferase regulatory subunit, C-terminal (20%) Aspartate carbamoyltransferase regulatory subunit, N-terminal (20%)" GKYPVLAICYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (13.7%) "GO:0016301 (17.4%) GO:0000287 (17.2%) GO:0004743 (17.2%)" response to stress (13.7%) "kinase activity (17.4%) magnesium ion binding (17.2%) pyruvate kinase activity (17.2%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" VLLCGAVLSR root 3.5.2.6 (100%) beta-lactamase (100%) "GO:0030655 (33.3%) GO:0046677 (33.3%) GO:0006310 (0%)" GO:0005634 (0%) "GO:0008800 (33.3%) GO:0003677 (0%) GO:0046872 (0%)" "beta-lactam antibiotic catabolic process (33.3%) response to antibiotic (33.3%) DNA recombination (0%)" nucleus (0%) "beta-lactamase activity (33.3%) DNA binding (0%) metal ion binding (0%)" "IPR012338 (25.2%) IPR000871 (25.2%) IPR045155 (24.9%)" "Beta-lactamase/transpeptidase-like (25.2%) Beta-lactamase, class-A (25.2%) Beta-lactamase class A, catalytic domain (24.9%)" NTTGNVLRPALQIIK Bacteria Bacteria 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0016407 (50%) GO:0008959 (47%) GO:0016746 (3%)" "acetyltransferase activity (50%) phosphate acetyltransferase activity (47%) acyltransferase activity (3%)" "IPR002505 (16.8%) IPR042112 (16.8%) IPR042113 (16.8%)" "Phosphate acetyl/butaryl transferase (16.8%) Phosphate acetyltransferase, domain 2 (16.8%) Phosphate acetyltransferase, domain 1 (16.8%)" LQTMVSHFTIDPSR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006950 (14.3%) GO:1902021 (14.3%)" GO:0005737 (14.3%) "GO:0004017 (14.3%) GO:0004672 (14.3%) GO:0042803 (14.3%)" "response to stress (14.3%) regulation of bacterial-type flagellum-dependent cell motility (14.3%)" cytoplasm (14.3%) "AMP kinase activity (14.3%) protein kinase activity (14.3%) protein homodimerization activity (14.3%)" "IPR006016 (33.7%) IPR014729 (33.7%) IPR006015 (32.7%)" "UspA (33.7%) Rossmann-like alpha/beta/alpha sandwich fold (33.7%) Universal stress protein A family (32.7%)" AYEVLVVVEKPVWERPAGR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR032286 (100%) Protein of unknown function DUF4837 (100%) NATVQMAVVPMLCGSSFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0032790 (20.1%) GO:0005737 (19.2%) "GO:0003746 (20.4%) GO:0003924 (20.1%) GO:0005525 (20.1%)" ribosome disassembly (20.1%) cytoplasm (19.2%) "translation elongation factor activity (20.4%) GTPase activity (20.1%) GTP binding (20.1%)" "IPR000795 (6.3%) IPR004161 (6.3%) IPR005225 (6.3%)" "Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%) Small GTP-binding domain (6.3%)" VNPGSIILSAEMMLR root "1.1.1.42 (99.9%) 1.1.1.41 (0.1%) 1.1.1.- (0%)" "isocitrate dehydrogenase (NADP(+)) (99.9%) isocitrate dehydrogenase (NAD(+)) (0.1%) With NAD(+) or NADP(+) as acceptor (0%)" "GO:0006099 (20.1%) GO:0006097 (19.8%) GO:0006979 (0%)" "GO:0005576 (0%) GO:0005737 (0%) GO:0005829 (0%)" "GO:0004450 (20.1%) GO:0000287 (19.8%) GO:0051287 (19.8%)" "tricarboxylic acid cycle (20.1%) glyoxylate cycle (19.8%) response to oxidative stress (0%)" "extracellular region (0%) cytoplasm (0%) cytosol (0%)" "isocitrate dehydrogenase (NADP+) activity (20.1%) magnesium ion binding (19.8%) NAD binding (19.8%)" "IPR004439 (33.5%) IPR024084 (33.5%) IPR019818 (33%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (33.5%) Isopropylmalate dehydrogenase-like domain (33.5%) Isocitrate/isopropylmalate dehydrogenase, conserved site (33%)" TANEAGMIIPVVITVYQDR Eubacteriales Bacteria Bacillati Bacillota Clostridia Eubacteriales GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (16.7%) IPR006519 (16.7%) IPR020783 (16.7%)" "Ribosomal protein uL11 (16.7%) Large ribosomal subunit protein uL11, bacteria (16.7%) Large ribosomal subunit protein uL11, C-terminal (16.7%)" VLEEGASTLSKEEAGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0008270 (100%) zinc ion binding (100%) "IPR000962 (51.3%) IPR037187 (48.7%)" "Zinc finger, DksA/TraR C4-type (51.3%) DksA, N-terminal domain superfamily (48.7%)" IAQLLDEGSFEELDMFVQHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.-.-.- (100%) Ligases (100%) GO:0015977 (21.1%) GO:0009317 (21.1%) "GO:0004658 (23.3%) GO:0003989 (21.1%) GO:0016740 (11.1%)" carbon fixation (21.1%) acetyl-CoA carboxylase complex (21.1%) "propionyl-CoA carboxylase activity (23.3%) acetyl-CoA carboxylase activity (21.1%) transferase activity (11.1%)" "IPR011762 (20.2%) IPR029045 (20.2%) IPR034733 (20.2%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20.2%) ClpP/crotonase-like domain superfamily (20.2%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.2%)" FVPNSIYYLYSIPEKETNANPNLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" IQEGVNALAGYAEIFQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.-.-.- (50%) 6.4.1.3 (50%)" "Ligases (50%) propionyl-CoA carboxylase (50%)" GO:0015977 (22.2%) GO:0009317 (22.2%) "GO:0004658 (24.3%) GO:0003989 (22.2%) GO:0016740 (9%)" carbon fixation (22.2%) acetyl-CoA carboxylase complex (22.2%) "propionyl-CoA carboxylase activity (24.3%) acetyl-CoA carboxylase activity (22.2%) transferase activity (9%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" LLTDFRSELLDSR root 4.1.1.15 (100%) glutamate decarboxylase (100%) "GO:0006538 (22.1%) GO:0051454 (10.5%)" "GO:0005829 (22.1%) GO:0016020 (0.1%)" "GO:0004351 (22.3%) GO:0030170 (22.1%) GO:0016829 (0.8%)" "L-glutamate catabolic process (22.1%) intracellular pH elevation (10.5%)" "cytosol (22.1%) membrane (0.1%)" "glutamate decarboxylase activity (22.3%) pyridoxal phosphate binding (22.1%) lyase activity (0.8%)" "IPR010107 (22.7%) IPR015424 (22.7%) IPR002129 (22.2%)" "Glutamate decarboxylase (22.7%) Pyridoxal phosphate-dependent transferase (22.7%) Pyridoxal phosphate-dependent decarboxylase (22.2%)" IEEELGDRAVYGYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (17%) "GO:0000015 (17%) GO:0005576 (16.1%) GO:0009986 (15.6%)" "GO:0000287 (17%) GO:0004634 (17%) GO:0016829 (0.5%)" glycolytic process (17%) "phosphopyruvate hydratase complex (17%) extracellular region (16.1%) cell surface (15.6%)" "magnesium ion binding (17%) phosphopyruvate hydratase activity (17%) lyase activity (0.5%)" "IPR000941 (17%) IPR020809 (17%) IPR020810 (17%)" "Enolase (17%) Enolase, conserved site (17%) Enolase, C-terminal TIM barrel domain (17%)" TTAEEIWRDTDGKVDLFVAGVGTGGTVSGVGAGLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.5.1.47 (100%) cysteine synthase (100%) GO:0006535 (45.2%) GO:0005737 (9.7%) GO:0004124 (45.2%) cysteine biosynthetic process from serine (45.2%) cytoplasm (9.7%) cysteine synthase activity (45.2%) "IPR001216 (16.7%) IPR001926 (16.7%) IPR005856 (16.7%)" "Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site (16.7%) Tryptophan synthase beta chain-like, PALP domain (16.7%) Cysteine synthase (16.7%)" ADLAGGNFDELKEHICSR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "3.-.-.- (50%) 3.1.2.6 (50%)" "Hydrolases (50%) hydroxyacylglutathione hydrolase (50%)" "GO:0016787 (50%) GO:0046872 (50%)" "hydrolase activity (50%) metal ion binding (50%)" "IPR001279 (33.3%) IPR036866 (33.3%) IPR051453 (33.3%)" "Metallo-beta-lactamase (33.3%) Ribonuclease Z/Hydroxyacylglutathione hydrolase-like (33.3%) Metallo-Beta-Lactamase Glyoxalase II (33.3%)" YAIDRLGEDVVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.3.5.1 (97.4%) 1.3.5.4 (2.6%)" "succinate dehydrogenase (97.4%) Transferred entry: 1.3.5.1 (2.6%)" GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (15.4%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (15.4%)" "IPR003953 (14.4%) IPR015939 (14.4%) IPR027477 (14.4%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.4%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.4%) Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily (14.4%)" VVKPETAMNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR003489 (50%) IPR036567 (50%)" "Ribosome hibernation promoting factor/RaiA (50%) Ribosome hibernation promotion factor-like (50%)" SIDVDLKNTTEVLTASAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0044281 (33.3%) "GO:0016625 (33.3%) GO:0030976 (33.3%)" small molecule metabolic process (33.3%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (33.3%) thiamine pyrophosphate binding (33.3%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" EGIYVTGFYYPVVPK Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.3.1.29 (99.7%) 2.3.1.50 (0.3%)" "glycine C-acetyltransferase (99.7%) serine C-palmitoyltransferase (0.3%)" "GO:0030148 (13.8%) GO:0019518 (13.8%) GO:0006567 (0.4%)" "GO:0005829 (14.3%) GO:0016020 (13.8%) GO:0005737 (0%)" "GO:0008890 (14.5%) GO:0030170 (14.5%) GO:0004758 (8.2%)" "sphingolipid biosynthetic process (13.8%) L-threonine catabolic process to glycine (13.8%) L-threonine catabolic process (0.4%)" "cytosol (14.3%) membrane (13.8%) cytoplasm (0%)" "glycine C-acetyltransferase activity (14.5%) pyridoxal phosphate binding (14.5%) serine C-palmitoyltransferase activity (8.2%)" "IPR004839 (16.7%) IPR015422 (16.7%) IPR015424 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%) Pyridoxal phosphate-dependent transferase (16.7%)" VETNGGAFEQVNLLYGENPNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.1.3.1 (55.6%) 6.4.1.1 (40.7%) 4.1.1.3 (3.7%)" "methylmalonyl-CoA carboxytransferase (55.6%) pyruvate carboxylase (40.7%) Transferred entry: 4.1.1.112 and 7.2.4.2 (3.7%)" GO:0006094 (18.1%) GO:0005737 (18.1%) "GO:0003824 (35.8%) GO:0004736 (20.5%) GO:0047154 (6.3%)" gluconeogenesis (18.1%) cytoplasm (18.1%) "catalytic activity (35.8%) pyruvate carboxylase activity (20.5%) methylmalonyl-CoA carboxytransferase activity (6.3%)" "IPR013785 (24.4%) IPR000891 (24.3%) IPR003379 (24.1%)" "Aldolase-type TIM barrel (24.4%) Pyruvate carboxyltransferase (24.3%) Carboxylase, conserved domain (24.1%)" DSIKHQAEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (18.2%) GO:0005737 (14.1%) "GO:0005524 (18.2%) GO:0140662 (18.2%) GO:0016853 (17.2%)" protein refolding (18.2%) cytoplasm (14.1%) "ATP binding (18.2%) ATP-dependent protein folding chaperone (18.2%) isomerase activity (17.2%)" "IPR001844 (17.3%) IPR002423 (17.3%) IPR027410 (17.3%)" "Chaperonin Cpn60/GroEL (17.3%) Chaperonin Cpn60/GroEL/TCP-1 family (17.3%) TCP-1-like chaperonin intermediate domain superfamily (17.3%)" LQGDDLVVNFSQTKPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005829 (100%) cytosol (100%) "IPR004375 (50%) IPR037012 (50%)" "NanQ anomerase/TabA/YiaL family (50%) NanQ anomerase/TabA/YiaL superfamily (50%)" IKDAQVEQVTDNNGLAAVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (20%) IPR006665 (20%) IPR036737 (20%)" "Outer membrane protein, bacterial (20%) OmpA-like domain (20%) OmpA-like domain superfamily (20%)" TNFRLELVVKDDKYGYEDGLVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) LMYALQENVAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR021857 (100%) Protein of unknown function DUF3467 (100%) KGSSLVTEMNR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR007139 (100%) Protein of unknown function DUF349 (100%) SVEILGGKIDFVLHSIGMSPNVR Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.3.1.9 (97.6%) 1.3.1.10 (2.4%)" "enoyl-[acyl-carrier-protein] reductase (NADH) (97.6%) enoyl-[acyl-carrier-protein] reductase (NADPH, Si-specific) (2.4%)" GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" VGNIAFNEPGSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.2%) GO:0006044 (32.2%)" "GO:0004342 (32.7%) GO:0016853 (2.8%)" "carbohydrate metabolic process (32.2%) N-acetylglucosamine metabolic process (32.2%)" "glucosamine-6-phosphate deaminase activity (32.7%) isomerase activity (2.8%)" "IPR037171 (14.7%) IPR052960 (14.7%) IPR006148 (14.5%)" "NagB/RpiA transferase-like (14.7%) Glucosamine-6-phosphate deaminase-like (14.7%) Glucosamine/galactosamine-6-phosphate isomerase (14.5%)" SLVHNMVVGVSEGYKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0002181 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.4%)" "GO:0003735 (24.9%) GO:0019843 (24.9%)" cytoplasmic translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.4%)" "structural constituent of ribosome (24.9%) rRNA binding (24.9%)" "IPR000702 (20%) IPR002358 (20%) IPR019906 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, conserved site (20%) Large ribosomal subunit protein uL6, bacteria (20%)" QTGNDLPSLYKETSEGGLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.1.17 (100%) L-serine ammonia-lyase (100%) GO:0006094 (25%) "GO:0003941 (25%) GO:0046872 (25%) GO:0051539 (25%)" gluconeogenesis (25%) "L-serine ammonia-lyase activity (25%) metal ion binding (25%) 4 iron, 4 sulfur cluster binding (25%)" "IPR004644 (20.1%) IPR005130 (20.1%) IPR029009 (20.1%)" "Iron-sulphur-dependent L-serine dehydratase single chain form (20.1%) Serine dehydratase-like, alpha subunit (20.1%) Allosteric substrate binding domain superfamily (20.1%)" LHQKEADIVAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.2%) GO:0017038 (11.2%) GO:0043952 (11%)" "GO:0005886 (11.2%) GO:0005829 (11%) GO:0031522 (11%)" "GO:0005524 (11.2%) GO:0046872 (10.8%) GO:0008564 (0.3%)" "protein targeting (11.2%) protein import (11.2%) protein transport by the Sec complex (11%)" "plasma membrane (11.2%) cytosol (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11.2%) metal ion binding (10.8%) protein-exporting ATPase activity (0.3%)" "IPR000185 (7.9%) IPR014018 (7.9%) IPR020937 (7.9%)" "Protein translocase subunit SecA (7.9%) SecA motor DEAD (7.9%) SecA conserved site (7.9%)" GYHLGNIMNAFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004818 (16.7%) GO:0005524 (16.7%)" glutamyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR000924 (9.9%) IPR004527 (9.9%) IPR008925 (9.9%)" "Glutamyl/glutaminyl-tRNA synthetase (9.9%) Glutamate-tRNA ligase, bacterial/mitochondrial (9.9%) Aminoacyl-tRNA synthetase, class I, anticodon-binding superfamily (9.9%)" ALHQAAAGEMVLSEALTPVLAASLR root 2.7.13.3 (100%) histidine kinase (100%) "GO:0006355 (20.2%) GO:0000160 (19.6%) GO:0042128 (18.6%)" "GO:0005886 (0.4%) GO:0005829 (0.2%) GO:0032993 (0.2%)" "GO:0003677 (20.2%) GO:0000166 (17.4%) GO:0005524 (1.2%)" "regulation of DNA-templated transcription (20.2%) phosphorelay signal transduction system (19.6%) nitrate assimilation (18.6%)" "plasma membrane (0.4%) cytosol (0.2%) protein-DNA complex (0.2%)" "DNA binding (20.2%) nucleotide binding (17.4%) ATP binding (1.2%)" "IPR000792 (16.3%) IPR016032 (16.3%) IPR036388 (16.3%)" "Transcription regulator LuxR, C-terminal (16.3%) Signal transduction response regulator, C-terminal effector (16.3%) Winged helix-like DNA-binding domain superfamily (16.3%)" SSVEALVACMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" KGESEDVVEVFKNQLNANLVYVDATDRFLNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (16.7%) IPR014729 (16.7%) IPR017926 (16.7%)" "GMP synthase, C-terminal (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Glutamine amidotransferase (16.7%)" MIHVVEILASQL Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005829 (50%) GO:0016491 (50%) cytosol (50%) oxidoreductase activity (50%) IPR004017 (100%) Cysteine-rich domain (100%) EAVADSGLDIENEDLNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" LIGDDEHGWDDEGVFNYEGGCYAK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.6%) GO:0005829 (17.6%) "GO:0004612 (17.6%) GO:0005524 (17.6%) GO:0046872 (17.2%)" gluconeogenesis (17.6%) cytosol (17.6%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.6%) ATP binding (17.6%) metal ion binding (17.2%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" VFLMDEPLSNLDAK root "7.5.2.13 (44.6%) 3.6.3.20 (31%) 3.6.3.- (20.8%)" "ABC-type D-xylose/L-arabinose transporter (44.6%) Transferred entry: 7.6.2.10 (31%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (20.8%)" "GO:0008643 (19.6%) GO:0005975 (0%) GO:0006109 (0%)" "GO:0055052 (20%) GO:0043190 (0%) GO:0005737 (0%)" "GO:0005524 (20.3%) GO:0016887 (20%) GO:0140359 (19.8%)" "carbohydrate transport (19.6%) carbohydrate metabolic process (0%) regulation of carbohydrate metabolic process (0%)" "ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing (20%) ATP-binding cassette (ABC) transporter complex (0%) cytoplasm (0%)" "ATP binding (20.3%) ATP hydrolysis activity (20%) ABC-type transporter activity (19.8%)" "IPR047641 (11.1%) IPR027417 (11%) IPR003439 (11%)" "ABC transporter, ATP-binding protein MalK/UgpC-like (11.1%) P-loop containing nucleoside triphosphate hydrolase (11%) ABC transporter-like, ATP-binding domain (11%)" GEPMVIEYNVR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0009113 (20%) GO:0006189 (19.7%) GO:0006164 (0.4%)" "GO:0004637 (20%) GO:0005524 (19.9%) GO:0046872 (19.8%)" "purine nucleobase biosynthetic process (20%) 'de novo' IMP biosynthetic process (19.7%) purine nucleotide biosynthetic process (0.4%)" "phosphoribosylamine-glycine ligase activity (20%) ATP binding (19.9%) metal ion binding (19.8%)" "IPR000115 (11.2%) IPR020561 (11.2%) IPR011054 (11.1%)" "Phosphoribosylglycinamide synthetase (11.2%) Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (11.2%) Rudiment single hybrid motif (11.1%)" FMGETYDQVQKEINRVPYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005737 (23%) GO:0070013 (4.6%)" "GO:0005524 (24.1%) GO:0051082 (24.1%) GO:0140662 (24.1%)" "cytoplasm (23%) intracellular organelle lumen (4.6%)" "ATP binding (24.1%) unfolded protein binding (24.1%) ATP-dependent protein folding chaperone (24.1%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" ADGSSYEADCATHGAPLGGDAYVNTIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.2.1.1 (95.8%) 2.2.1.- (4.2%)" "transketolase (95.8%) Transketolases and transaldolases (4.2%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" DFKDNATVLNEVNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016020 (100%) membrane (100%) "IPR006665 (17.2%) IPR011990 (17.2%) IPR019734 (17.2%)" "OmpA-like domain (17.2%) Tetratricopeptide-like helical domain superfamily (17.2%) Tetratricopeptide repeat (17.2%)" LESYDDASLRKDLENNPEEMLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" MNLSNLKPAEGSTK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) "GO:0022625 (25%) GO:0005840 (0.2%)" "GO:0003735 (25%) GO:0019843 (24.8%)" translation (25%) "cytosolic large ribosomal subunit (25%) ribosome (0.2%)" "structural constituent of ribosome (25%) rRNA binding (24.8%)" "IPR005749 (20%) IPR021131 (20%) IPR030878 (20%)" "Large ribosomal subunit protein uL15, bacteria (20%) Large ribosomal subunit protein uL15/eL18 (20%) Large ribosomal subunit protein uL15 (20%)" EVCLLNQEDIMDAKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006414 (1.3%) GO:0005737 (49.4%) GO:0003746 (49.4%) translational elongation (1.3%) cytoplasm (49.4%) translation elongation factor activity (49.4%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" IFYGEEFVSYLKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "4.1.1.12 (90.9%) 2.6.1.1 (9.1%)" "aspartate 4-decarboxylase (90.9%) aspartate transaminase (9.1%)" GO:0006520 (27.9%) "GO:0030170 (27.9%) GO:0008483 (24.6%) GO:0047688 (11.5%)" amino acid metabolic process (27.9%) "pyridoxal phosphate binding (27.9%) transaminase activity (24.6%) aspartate 4-decarboxylase activity (11.5%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" EMSTNDLVERVEAEVVNYNQMVINHSISPLENPAQIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001854 (33.3%) IPR018254 (33.3%) IPR036049 (33.3%)" "Large ribosomal subunit protein uL29 (33.3%) Large ribosomal subunit protein uL29, conserved site (33.3%) Large ribosomal subunit protein uL29 superfamily (33.3%)" IEPSAEAATGCAYQAYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) LQLIDQLKELCESQDDFNKLYNSFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR007139 (100%) Protein of unknown function DUF349 (100%) ERPEDIVLLFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (33.3%) "GO:0005524 (33.3%) GO:0043565 (33.3%)" regulation of DNA-templated transcription (33.3%) "ATP binding (33.3%) sequence-specific DNA binding (33.3%)" "IPR002078 (12.5%) IPR002197 (12.5%) IPR003593 (12.5%)" "RNA polymerase sigma factor 54 interaction domain (12.5%) DNA binding HTH domain, Fis-type (12.5%) AAA+ ATPase domain (12.5%)" GKVLIIGAGGVGTVVAHK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "1.5.1.43 (44.4%) 1.5.1.7 (44.4%) 1.-.-.- (11.1%)" "carboxynorspermidine synthase (44.4%) saccharopine dehydrogenase (NAD(+), L-lysine-forming) (44.4%) Oxidoreductases (11.1%)" "GO:0102143 (38.9%) GO:0016491 (33.3%) GO:0004754 (27.8%)" "carboxynorspermidine dehydrogenase activity (38.9%) oxidoreductase activity (33.3%) saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (27.8%)" "IPR005097 (33.6%) IPR036291 (33.6%) IPR032095 (32.9%)" "Saccharopine dehydrogenase, NADP binding domain (33.6%) NAD(P)-binding domain superfamily (33.6%) Saccharopine dehydrogenase-like, C-terminal (32.9%)" SVFEEQIMMEAHHMATYGSPEGDDYLSTYVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.3.1.1 (75%) 1.3.98.1 (25%)" "dihydrouracil dehydrogenase (NAD(+)) (75%) dihydroorotate oxidase (fumarate) (25%)" "GO:0006207 (23.9%) GO:0044205 (21.7%) GO:0006222 (2.2%)" GO:0005737 (23.9%) "GO:0004152 (20.7%) GO:0004159 (4.3%) GO:1990663 (3.3%)" "'de novo' pyrimidine nucleobase biosynthetic process (23.9%) 'de novo' UMP biosynthetic process (21.7%) UMP biosynthetic process (2.2%)" cytoplasm (23.9%) "dihydroorotate dehydrogenase activity (20.7%) dihydropyrimidine dehydrogenase (NAD+) activity (4.3%) dihydroorotate dehydrogenase (fumarate) activity (3.3%)" "IPR005720 (25%) IPR012135 (25%) IPR013785 (25%)" "Dihydroorotate dehydrogenase, catalytic (25%) Dihydroorotate dehydrogenase, class 1/ 2 (25%) Aldolase-type TIM barrel (25%)" SAFNFVHACTPIMMR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) GO:0006633 (33.3%) "GO:0004316 (33.3%) GO:0051287 (33.3%)" fatty acid biosynthetic process (33.3%) "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33.3%) NAD binding (33.3%)" "IPR002347 (16.7%) IPR011284 (16.7%) IPR020904 (16.7%)" "Short-chain dehydrogenase/reductase SDR (16.7%) 3-oxoacyl-(acyl-carrier-protein) reductase (16.7%) Short-chain dehydrogenase/reductase, conserved site (16.7%)" SGKGFIEQLTAHCEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (19.9%) GO:0006096 (19.9%)" GO:0005829 (19.9%) "GO:0004619 (19.9%) GO:0030145 (19.9%) GO:0016853 (0.3%)" "glucose catabolic process (19.9%) glycolytic process (19.9%)" cytosol (19.9%) "phosphoglycerate mutase activity (19.9%) manganese ion binding (19.9%) isomerase activity (0.3%)" "IPR005995 (20.1%) IPR011258 (20.1%) IPR036646 (20.1%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.1%) BPG-independent PGAM, N-terminal (20.1%) BPG-independent phosphoglycerate mutase, domain B superfamily (20.1%)" AHYVLMNVEAPQEVIDELETTFR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (24.8%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0022627 (24.8%) GO:0005840 (0.4%) GO:0005737 (0.1%)" "GO:0003735 (24.8%) GO:0070181 (24.8%) GO:0048027 (0.1%)" "translation (24.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (24.8%) ribosome (0.4%) cytoplasm (0.1%)" "structural constituent of ribosome (24.8%) small ribosomal subunit rRNA binding (24.8%) mRNA 5'-UTR binding (0.1%)" "IPR000529 (20%) IPR014717 (20%) IPR020814 (20%)" "Small ribosomal subunit protein bS6 (20%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (20%) Small ribosomal subunit protein bS6, plastid/chloroplast (20%)" SQVQSGILPEHCR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "1.11.1.- (73.9%) 4.99.1.1 (21.7%) 4.98.1.1 (3.2%)" "Peroxidases (73.9%) Transferred entry: 4.98.1.1 (21.7%) protoporphyrin ferrochelatase (3.2%)" "GO:0005829 (32.3%) GO:0005737 (0%)" "GO:0004601 (33.4%) GO:0020037 (32.3%) GO:0016829 (1.7%)" "cytosol (32.3%) cytoplasm (0%)" "peroxidase activity (33.4%) heme binding (32.3%) lyase activity (1.7%)" "IPR048327 (25.3%) IPR011008 (25.1%) IPR006314 (24.9%)" "Dyp-type peroxidase, N-terminal domain (25.3%) Dimeric alpha-beta barrel (25.1%) Dyp-type peroxidase (24.9%)" SSSIVLVAESELTGGAMHYAER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0016208 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) AMP binding (9.1%)" "IPR000023 (16.7%) IPR012003 (16.7%) IPR012828 (16.7%)" "Phosphofructokinase domain (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic (16.7%)" INNPALTAQVLVCVAR Bacteria Bacteria 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0000166 (25%) GO:0047850 (25%) GO:0016491 (0.2%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "nucleotide binding (25%) diaminopimelate dehydrogenase activity (25%) oxidoreductase activity (0.2%)" "IPR000683 (25%) IPR010190 (25%) IPR032094 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Diaminopimelate dehydrogenase, Ddh (25%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25%)" GQVLAKPGTIKPHTKFESEVYILSK root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0046677 (0.1%) GO:0006414 (0%)" "GO:0005829 (20.2%) GO:0032045 (6.9%) GO:0005886 (1.5%)" "GO:0003746 (20.4%) GO:0005525 (20.3%) GO:0003924 (10.3%)" "response to antibiotic (0.1%) translational elongation (0%)" "cytosol (20.2%) guanyl-nucleotide exchange factor complex (6.9%) plasma membrane (1.5%)" "translation elongation factor activity (20.4%) GTP binding (20.3%) GTPase activity (10.3%)" "IPR050055 (12.4%) IPR004160 (12.2%) IPR009001 (12.2%)" "Elongation factor Tu GTPase (12.4%) Translation elongation factor EFTu/EF1A, C-terminal (12.2%) Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (12.2%)" TVAEGVTEYMAWLNRDA root 5.1.3.20 (100%) ADP-glyceromanno-heptose 6-epimerase (100%) "GO:0097171 (22%) GO:0009244 (20.7%) GO:0005975 (5%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0008712 (26.3%) GO:0050661 (25.6%) GO:0016853 (0.2%)" "ADP-L-glycero-beta-D-manno-heptose biosynthetic process (22%) lipopolysaccharide core region biosynthetic process (20.7%) carbohydrate metabolic process (5%)" "cytosol (0%) membrane (0%)" "ADP-glyceromanno-heptose 6-epimerase activity (26.3%) NADP binding (25.6%) isomerase activity (0.2%)" "IPR036291 (33.7%) IPR001509 (33.4%) IPR011912 (32.8%)" "NAD(P)-binding domain superfamily (33.7%) NAD-dependent epimerase/dehydratase (33.4%) ADP-L-glycero-D-manno-heptose-6-epimerase (32.8%)" TLGECEIYDRTAPDEVLER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.29 (100%) glycerate dehydrogenase (100%) "GO:0051287 (50%) GO:0016616 (37.5%) GO:0008465 (9.4%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (37.5%) hydroxypyruvate reductase (NADH) activity (9.4%)" "IPR006139 (20%) IPR006140 (20%) IPR029753 (20%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (20%)" NQFPYPDFLEVQLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (17.6%) GO:0006508 (5.9%)" GO:0000428 (17.6%) "GO:0003677 (17.6%) GO:0003899 (17.6%) GO:0032549 (17.6%)" "DNA-templated transcription (17.6%) proteolysis (5.9%)" DNA-directed RNA polymerase complex (17.6%) "DNA binding (17.6%) DNA-directed RNA polymerase activity (17.6%) ribonucleoside binding (17.6%)" "IPR007642 (7.7%) IPR007644 (7.7%) IPR015712 (7.7%)" "RNA polymerase Rpb2, domain 2 (7.7%) RNA polymerase, beta subunit, protrusion (7.7%) DNA-directed RNA polymerase, subunit 2 (7.7%)" GFDHSIMMIDGIRDER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (50%) GO:0015344 (50%) cell outer membrane (50%) siderophore uptake transmembrane transporter activity (50%) "IPR000531 (20%) IPR012910 (20%) IPR036942 (20%)" "TonB-dependent receptor-like, beta-barrel (20%) TonB-dependent receptor, plug domain (20%) TonB-dependent receptor-like, beta-barrel domain superfamily (20%)" AKPDPSIVNEIVER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.3.18 (100%) phosphoglycolate phosphatase (100%) GO:0006281 (33.3%) GO:0005829 (33.3%) GO:0008967 (33.3%) DNA repair (33.3%) cytosol (33.3%) phosphoglycolate phosphatase activity (33.3%) "IPR006439 (16.7%) IPR023198 (16.7%) IPR023214 (16.7%)" "HAD hydrolase, subfamily IA (16.7%) Phosphoglycolate phosphatase-like, domain 2 (16.7%) HAD superfamily (16.7%)" HSVQNASYENKDPLLIYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0004386 (0.4%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) helicase activity (0.4%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" KMTGAGMMDCK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006414 (0.3%) GO:0005737 (48.6%) GO:0003746 (51.1%) translational elongation (0.3%) cytoplasm (48.6%) translation elongation factor activity (51.1%) "IPR009060 (20.2%) IPR001816 (20%) IPR018101 (20%)" "UBA-like superfamily (20.2%) Translation elongation factor EFTs/EF1B (20%) Translation elongation factor Ts, conserved site (20%)" YAEEAYCISDSPEDTSYLKPEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "6.3.4.14 (90%) 6.4.1.1 (5%) 6.4.1.7 (5%)" "biotin carboxylase (90%) pyruvate carboxylase (5%) 2-oxoglutarate carboxylase (5%)" GO:2001295 (17%) "GO:0005524 (22.3%) GO:0046872 (22.3%) GO:0003989 (16%)" malonyl-CoA biosynthetic process (17%) "ATP binding (22.3%) metal ion binding (22.3%) acetyl-CoA carboxylase activity (16%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" SMLNPGSALLTLSYLGAER root 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) "GO:0006633 (34.5%) GO:0009102 (25.9%) GO:0030497 (0.7%)" "GO:0005829 (0.2%) GO:0016020 (0.2%) GO:0032991 (0.2%)" "GO:0004318 (35.1%) GO:0016491 (0.9%) GO:0042802 (0.7%)" "fatty acid biosynthetic process (34.5%) biotin biosynthetic process (25.9%) fatty acid elongation (0.7%)" "cytosol (0.2%) membrane (0.2%) protein-containing complex (0.2%)" "enoyl-[acyl-carrier-protein] reductase (NADH) activity (35.1%) oxidoreductase activity (0.9%) identical protein binding (0.7%)" "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" EQFELSSYKR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (19.9%) GO:0015935 (0.1%)" "GO:0003735 (20%) GO:0000049 (19%) GO:0003723 (0.9%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (19.9%) small ribosomal subunit (0.1%)" "structural constituent of ribosome (20%) tRNA binding (19%) RNA binding (0.9%)" "IPR001848 (25%) IPR027486 (25%) IPR036838 (25%)" "Small ribosomal subunit protein uS10 (25%) Small ribosomal subunit protein uS10 domain (25%) Small ribosomal subunit protein uS10 domain superfamily (25%)" ALQSSINEDKAH Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales GO:0005829 (100%) cytosol (100%) "IPR009857 (50%) IPR023202 (50%)" "Uncharacterised protein family UPF0352 (50%) YejL-like superfamily (50%)" NAYSSGTMVR Pseudomonadati Bacteria Pseudomonadati 1.12.99.6 (100%) hydrogenase (acceptor) (100%) "GO:0030313 (28.6%) GO:0005886 (3.6%)" "GO:0008901 (32.1%) GO:0016151 (32.1%) GO:0033748 (3.6%)" "cell envelope (28.6%) plasma membrane (3.6%)" "ferredoxin hydrogenase activity (32.1%) nickel cation binding (32.1%) hydrogenase (acceptor) activity (3.6%)" "IPR001501 (25%) IPR018194 (25%) IPR029014 (25%)" "Nickel-dependent hydrogenase, large subunit (25%) Nickel-dependent hydrogenase, large subunit, nickel binding site (25%) [NiFe]-hydrogenase, large subunit (25%)" MVDKVVGATAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" TEAIYADVIKNSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" LFEMEVPEINDGLITIKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006353 (19.6%) GO:0031564 (19.6%)" GO:0005829 (19.6%) "GO:0003723 (19.6%) GO:0003700 (19.4%) GO:0003746 (2%)" "DNA-templated transcription termination (19.6%) transcription antitermination (19.6%)" cytosol (19.6%) "RNA binding (19.6%) DNA-binding transcription factor activity (19.4%) translation elongation factor activity (2%)" "IPR009019 (12.5%) IPR010213 (12.5%) IPR012340 (12.5%)" "K homology domain superfamily, prokaryotic type (12.5%) Transcription factor NusA (12.5%) Nucleic acid-binding, OB-fold (12.5%)" EIGNGFSELNDAEDQAERFQEQVNAK root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.7%) GO:0006418 (0.1%) GO:0034605 (0.1%)" "GO:0005829 (14.7%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0000049 (14.7%) GO:0004824 (14.7%) GO:0005524 (14.7%)" "lysyl-tRNA aminoacylation (14.7%) tRNA aminoacylation for protein translation (0.1%) cellular response to heat (0.1%)" "cytosol (14.7%) cytoplasm (0.1%) membrane (0.1%)" "tRNA binding (14.7%) lysine-tRNA ligase activity (14.7%) ATP binding (14.7%)" "IPR004364 (12.1%) IPR045864 (12.1%) IPR006195 (12%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (12.1%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (12.1%) Aminoacyl-tRNA synthetase, class II (12%)" LYSRDNEHLMDLLNSK Pseudomonadati Bacteria Pseudomonadati GO:0043200 (32.5%) GO:0005829 (32.5%) GO:0043565 (35%) response to amino acid (32.5%) cytosol (32.5%) sequence-specific DNA binding (35%) "IPR011008 (17.2%) IPR019887 (17.2%) IPR000485 (16.1%)" "Dimeric alpha-beta barrel (17.2%) Transcription regulator AsnC/Lrp, ligand binding domain (17.2%) AsnC-type HTH domain (16.1%)" SYDHEVIDQSAK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0006412 (20%) "GO:0005840 (20.1%) GO:1990904 (20%)" "GO:0000049 (20%) GO:0003735 (20%)" translation (20%) "ribosome (20.1%) ribonucleoprotein complex (20%)" "tRNA binding (20%) structural constituent of ribosome (20%)" "IPR001848 (25%) IPR018268 (25%) IPR027486 (25%)" "Small ribosomal subunit protein uS10 (25%) Small ribosomal subunit protein uS10, conserved site (25%) Small ribosomal subunit protein uS10 domain (25%)" SIIESLKNEVQIPAEFR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0016787 (50%) GO:0046961 (50%)" "hydrolase activity (50%) proton-transporting ATPase activity, rotational mechanism (50%)" "IPR024492 (98.2%) IPR002843 (1.8%)" "CT_309/TC_0583-like (98.2%) ATPase, V0 complex, C/D subunit (1.8%)" MSPEAFEESVDAIR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0005506 (100%) iron ion binding (100%) "IPR011978 (33.5%) IPR004027 (33.2%) IPR036255 (33.2%)" "YgfB-like (33.5%) SEC-C motif (33.2%) YgfB-like superfamily (33.2%)" DDTPMFVCGVNEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0006006 (24.8%) "GO:0051287 (25%) GO:0050661 (24.8%) GO:0004365 (13.3%)" glucose metabolic process (24.8%) "NAD binding (25%) NADP binding (24.8%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (13.3%)" "IPR020830 (16.8%) IPR020831 (16.8%) IPR020828 (16.7%)" "Glyceraldehyde 3-phosphate dehydrogenase, active site (16.8%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (16.8%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%)" MKLTLMVLAAGMGSR NMITGAAQMDGAILVCSATDGPMPQTR Bacteria Bacteria 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (14.3%) GO:0032045 (9.7%) GO:0005737 (1.7%)" "GO:0003746 (16.9%) GO:0003924 (16.9%) GO:0005525 (16.9%)" "cytosol (14.3%) guanyl-nucleotide exchange factor complex (9.7%) cytoplasm (1.7%)" "translation elongation factor activity (16.9%) GTPase activity (16.9%) GTP binding (16.9%)" "IPR000795 (8.8%) IPR027417 (8.8%) IPR031157 (8.8%)" "Translational (tr)-type GTP-binding domain (8.8%) P-loop containing nucleoside triphosphate hydrolase (8.8%) Tr-type G domain, conserved site (8.8%)" RAEALKNYLTTNEKVPGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" IVAALLENHQTPEGIRIPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (24.6%) GO:0005737 (24.6%) "GO:0004828 (24.6%) GO:0005524 (24.6%) GO:0016874 (1.6%)" seryl-tRNA aminoacylation (24.6%) cytoplasm (24.6%) "serine-tRNA ligase activity (24.6%) ATP binding (24.6%) ligase activity (1.6%)" "IPR002314 (14.2%) IPR002317 (14.2%) IPR006195 (14.2%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (14.2%) Serine-tRNA ligase, type1 (14.2%) Aminoacyl-tRNA synthetase, class II (14.2%)" ASEPALGAYASK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (62.1%) "GO:0016853 (34.5%) GO:0003755 (3.4%)" plasma membrane (62.1%) "isomerase activity (34.5%) peptidyl-prolyl cis-trans isomerase activity (3.4%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" TSETYSEVVEGMQFDR NLLPIIDDFER Bacteria Bacteria GO:0006457 (16.7%) GO:0005737 (16.7%) "GO:0000774 (16.7%) GO:0042803 (16.7%) GO:0051082 (16.7%)" protein folding (16.7%) cytoplasm (16.7%) "adenyl-nucleotide exchange factor activity (16.7%) protein homodimerization activity (16.7%) unfolded protein binding (16.7%)" "IPR000740 (33.3%) IPR009012 (33.3%) IPR013805 (33.3%)" "GrpE nucleotide exchange factor (33.3%) GrpE nucleotide exchange factor, head (33.3%) GrpE nucleotide exchange factor, coiled-coil (33.3%)" LSKEYDHIKDVNDLPELLK root 3.6.1.1 (100%) inorganic diphosphatase (100%) GO:0006796 (24.9%) "GO:0005737 (24.8%) GO:0005829 (0.1%) GO:0016020 (0%)" "GO:0000287 (24.9%) GO:0004427 (24.9%) GO:0016787 (0.2%)" phosphate-containing compound metabolic process (24.9%) "cytoplasm (24.8%) cytosol (0.1%) membrane (0%)" "magnesium ion binding (24.9%) inorganic diphosphate phosphatase activity (24.9%) hydrolase activity (0.2%)" "IPR008162 (50%) IPR036649 (50%)" "Inorganic pyrophosphatase (50%) Inorganic pyrophosphatase superfamily (50%)" TAPGANDTLTDADALKIMQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0016884 (92.3%) GO:0016740 (7.7%)" "carbon-nitrogen ligase activity, with glutamine as amido-N-donor (92.3%) transferase activity (7.7%)" "IPR003789 (25%) IPR019004 (25%) IPR023168 (25%)" "Aspartyl/glutamyl-tRNA amidotransferase subunit B-like (25%) Uncharacterised protein YqeY/Aim41 (25%) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 (25%)" SVLVEEVDKMMQEKVNEYIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.5%) GO:0043335 (16.5%) GO:0051083 (16.5%)" "GO:0003755 (16.5%) GO:0043022 (16.5%) GO:0044183 (16.5%)" "protein transport (16.5%) protein unfolding (16.5%) 'de novo' cotranslational protein folding (16.5%)" "peptidyl-prolyl cis-trans isomerase activity (16.5%) ribosome binding (16.5%) protein folding chaperone (16.5%)" "IPR005215 (20.3%) IPR008881 (20.3%) IPR036611 (20.3%)" "Trigger factor (20.3%) Trigger factor, ribosome-binding, bacterial (20.3%) Trigger factor ribosome-binding domain superfamily (20.3%)" NIDLKIPFVTAAMDTVTEAK VGDEIEAVVLTLDREER Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (22.9%) IPR012340 (22.9%) IPR035104 (22.9%)" "S1 domain (22.9%) Nucleic acid-binding, OB-fold (22.9%) Ribosomal protein S1-like (22.9%)" QKFNDFQMHIEWQVPTNITGESQSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0016787 (90%) GO:0046872 (10%)" "hydrolase activity (90%) metal ion binding (10%)" IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) TLDVSVVDLTVNLAKPATYAEICAAMK Bacteria Bacteria 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0006006 (24.7%) "GO:0050661 (24.7%) GO:0051287 (24.7%) GO:0004365 (12.9%)" glucose metabolic process (24.7%) "NADP binding (24.7%) NAD binding (24.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (12.9%)" "IPR020829 (17.1%) IPR020831 (17.1%) IPR020830 (16.6%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.1%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.1%) Glyceraldehyde 3-phosphate dehydrogenase, active site (16.6%)" VGEEVQIIGLGAAGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20.5%) "GO:0003746 (20.5%) GO:0003924 (20.5%) GO:0005525 (20.5%)" cytosol (20.5%) "translation elongation factor activity (20.5%) GTPase activity (20.5%) GTP binding (20.5%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" NAGAIISHPFGSVIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "4.2.1.1 (66.7%) 4.2.1.- (33.3%)" "carbonic anhydrase (66.7%) Hydro-lyases (33.3%)" "GO:0004089 (50%) GO:0008270 (50%)" "carbonate dehydratase activity (50%) zinc ion binding (50%)" "IPR001765 (50%) IPR036874 (50%)" "Carbonic anhydrase (50%) Carbonic anhydrase superfamily (50%)" ILREDVQAYVK Bacteria Bacteria "2.3.1.12 (98.7%) 2.3.1.- (1.2%) 2.3.-.- (0.1%)" "dihydrolipoyllysine-residue acetyltransferase (98.7%) Transferring groups other than amino-acyl groups (1.2%) Acyltransferases (0.1%)" "GO:0006086 (20.1%) GO:0006090 (0%) GO:0042867 (0%)" "GO:0005737 (20%) GO:0045254 (19.4%)" "GO:0031405 (20%) GO:0004742 (20%) GO:0016746 (0.3%)" "pyruvate decarboxylation to acetyl-CoA (20.1%) pyruvate metabolic process (0%) pyruvate catabolic process (0%)" "cytoplasm (20%) pyruvate dehydrogenase complex (19.4%)" "lipoic acid binding (20%) dihydrolipoyllysine-residue acetyltransferase activity (20%) acyltransferase activity (0.3%)" "IPR004167 (11.3%) IPR050743 (11.3%) IPR036625 (11.3%)" "Peripheral subunit-binding domain (11.3%) 2-oxoacid dehydrogenase family, E2 component (11.3%) E3-binding domain superfamily (11.3%)" SLKNVDIILNAQTTEVKGDGSK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "1.8.1.- (96.9%) 1.6.4.- (3.1%)" "With NAD(+) or NADP(+) as acceptor (96.9%) With a disulfide as acceptor (3.1%)" "GO:0000302 (14%) GO:0045454 (0%) GO:0006979 (0%)" "GO:0005829 (14.4%) GO:0032991 (14.4%) GO:0009321 (0%)" "GO:0050660 (14.4%) GO:0016668 (14.4%) GO:0051287 (14%)" "response to reactive oxygen species (14%) cell redox homeostasis (0%) response to oxidative stress (0%)" "cytosol (14.4%) protein-containing complex (14.4%) alkyl hydroperoxide reductase complex (0%)" "flavin adenine dinucleotide binding (14.4%) oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (14.4%) NAD binding (14%)" "IPR023753 (11.4%) IPR036188 (11.4%) IPR050097 (11.4%)" "FAD/NAD(P)-binding domain (11.4%) FAD/NAD(P)-binding domain superfamily (11.4%) Ferredoxin--NADP reductase type 2 (11.4%)" DCKGYDKLTK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50%) GO:0046872 (50%)" "alkaline phosphatase activity (50%) metal ion binding (50%)" "IPR001952 (50%) IPR017850 (50%)" "Alkaline phosphatase (50%) Alkaline-phosphatase-like, core domain superfamily (50%)" TFESLPVAPLPNRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.5.1.3 (100%) dihydrofolate reductase (100%) "GO:0006730 (14%) GO:0046452 (14%) GO:0046654 (14%)" GO:0005829 (14%) "GO:0004146 (14%) GO:0050661 (14%) GO:0016301 (1.8%)" "one-carbon metabolic process (14%) dihydrofolate metabolic process (14%) tetrahydrofolate biosynthetic process (14%)" cytosol (14%) "dihydrofolate reductase activity (14%) NADP binding (14%) kinase activity (1.8%)" "IPR001796 (33.3%) IPR012259 (33.3%) IPR024072 (33.3%)" "Dihydrofolate reductase domain (33.3%) Dihydrofolate reductase (33.3%) Dihydrofolate reductase-like domain superfamily (33.3%)" RPGSVGACATPSR Bacteria Bacteria GO:0006412 (25%) "GO:0022625 (25%) GO:0005840 (0.2%)" "GO:0003735 (25%) GO:0019843 (24.8%)" translation (25%) "cytosolic large ribosomal subunit (25%) ribosome (0.2%)" "structural constituent of ribosome (25%) rRNA binding (24.8%)" "IPR009000 (25.1%) IPR019927 (25.1%) IPR000597 (24.9%)" "Translation protein, beta-barrel domain superfamily (25.1%) Large ribosomal subunit protein uL3, bacteria/organella (25.1%) Large ribosomal subunit protein uL3 (24.9%)" KEGVDVSITGNSTNPTR Bacteria Bacteria IPR025964 (100%) GGGtGRT protein (100%) GGVILYPTDTIWGIGCDATNPEAVKR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.87 (100%) L-threonylcarbamoyladenylate synthase (100%) "GO:0006450 (14.7%) GO:0008033 (14.7%)" GO:0005737 (14.7%) "GO:0000049 (14.7%) GO:0003725 (14.7%) GO:0016779 (12.1%)" "regulation of translational fidelity (14.7%) tRNA processing (14.7%)" cytoplasm (14.7%) "tRNA binding (14.7%) double-stranded RNA binding (14.7%) nucleotidyltransferase activity (12.1%)" "IPR006070 (33.3%) IPR017945 (33.3%) IPR050156 (33.3%)" "Threonylcarbamoyl-AMP synthase-like domain (33.3%) DHBP synthase RibB-like alpha/beta domain superfamily (33.3%) Threonylcarbamoyl-AMP synthase, SUA5 (33.3%)" LATEMASENAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" RQEITHTNAEMAADSIRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) GO:0044550 (50%) "GO:0016746 (44.4%) GO:0033818 (5.6%)" secondary metabolite biosynthetic process (50%) "acyltransferase activity (44.4%) beta-ketoacyl-acyl-carrier-protein synthase III activity (5.6%)" "IPR013747 (50%) IPR016039 (50%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (50%) Thiolase-like (50%)" FLRPNLTHSMDLYYGAWAVLDPTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" LQVEHPITEEVVGVDLVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.3.4.14 (88.5%) 6.4.1.2 (7.9%) 6.4.1.7 (2.9%)" "biotin carboxylase (88.5%) acetyl-CoA carboxylase (7.9%) 2-oxoglutarate carboxylase (2.9%)" GO:2001295 (16.2%) "GO:0005524 (22.7%) GO:0046872 (22.7%) GO:0003989 (16.9%)" malonyl-CoA biosynthetic process (16.2%) "ATP binding (22.7%) metal ion binding (22.7%) acetyl-CoA carboxylase activity (16.9%)" "IPR005479 (12.9%) IPR011761 (12.9%) IPR011764 (12.9%)" "Carbamoyl phosphate synthase, ATP-binding domain (12.9%) ATP-grasp fold (12.9%) Biotin carboxylation domain (12.9%)" IGSYNPNTNPATVDLNFER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" RGGKKEEESGMVTGPVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" MLNELDRDFEVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.1.1.13 (100%) methionine synthase (100%) GO:0032259 (33.3%) GO:0005829 (33.3%) GO:0008705 (33.3%) methylation (33.3%) cytosol (33.3%) methionine synthase activity (33.3%) "IPR004223 (33.3%) IPR037010 (33.3%) IPR050554 (33.3%)" "Vitamin B12-dependent methionine synthase, activation domain (33.3%) Vitamin B12-dependent methionine synthase, activation domain superfamily (33.3%) Methionine Synthase/Corrinoid (33.3%)" IRPVVSIESVIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0016903 (92.9%) GO:0019164 (7.1%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (92.9%) pyruvate synthase activity (7.1%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" AILLTAQENNSPVILGVSEGAGK Bacillota Bacteria Bacillati Bacillota "4.1.2.13 (91.9%) 4.1.2.29 (8.1%)" "fructose-bisphosphate aldolase (91.9%) 5-dehydro-2-deoxyphosphogluconate aldolase (8.1%)" "GO:0006096 (24.5%) GO:0030388 (24.5%)" "GO:0004332 (24.5%) GO:0008270 (24.5%) GO:0047441 (2%)" "glycolytic process (24.5%) fructose 1,6-bisphosphate metabolic process (24.5%)" "fructose-bisphosphate aldolase activity (24.5%) zinc ion binding (24.5%) 5-dehydro-2-deoxyphosphogluconate aldolase activity (2%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" INNENLDESR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR002931 (33.9%) IPR038765 (33.9%) IPR008969 (30.5%)" "Transglutaminase-like (33.9%) Papain-like cysteine peptidase superfamily (33.9%) Carboxypeptidase-like, regulatory domain superfamily (30.5%)" VDALGHVDRPIPTMLNYATHIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" LGGDSPYMGMR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" SYDHNLVDKSAEK Pseudomonadati Bacteria Pseudomonadati GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%) GO:0015935 (0%)" "GO:0003735 (20%) GO:0000049 (19.4%) GO:0003723 (0.6%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%) small ribosomal subunit (0%)" "structural constituent of ribosome (20%) tRNA binding (19.4%) RNA binding (0.6%)" "IPR001848 (25.1%) IPR027486 (25.1%) IPR036838 (25%)" "Small ribosomal subunit protein uS10 (25.1%) Small ribosomal subunit protein uS10 domain (25.1%) Small ribosomal subunit protein uS10 domain superfamily (25%)" VGLLRPITLWPFPSK Bacteria Bacteria "1.2.7.7 (53.3%) 1.2.7.3 (26.7%) 1.2.7.1 (13.3%)" "3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) (53.3%) 2-oxoglutarate synthase (26.7%) pyruvate synthase (13.3%)" "GO:0016491 (60.5%) GO:0043807 (23.3%) GO:0047553 (9.3%)" "oxidoreductase activity (60.5%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity (23.3%) 2-oxoglutarate synthase activity (9.3%)" "IPR002880 (20%) IPR009014 (20%) IPR029061 (20%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%) Thiamin diphosphate-binding fold (20%)" GILKPGATIIEPTSGNTGVGLAFVSASK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.5.1.47 (100%) cysteine synthase (100%) GO:0006535 (44.4%) GO:0005737 (11.1%) GO:0004124 (44.4%) cysteine biosynthetic process from serine (44.4%) cytoplasm (11.1%) cysteine synthase activity (44.4%) "IPR001216 (16.7%) IPR001926 (16.7%) IPR005856 (16.7%)" "Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site (16.7%) Tryptophan synthase beta chain-like, PALP domain (16.7%) Cysteine synthase (16.7%)" LYPANATTNSSHGVTSIDAIMPVLER root 3.5.2.3 (100%) dihydroorotase (100%) "GO:0006207 (19.9%) GO:0044205 (19.9%) GO:0006221 (0.1%)" "GO:0005829 (19.9%) GO:0005737 (0.1%)" "GO:0004151 (19.9%) GO:0008270 (19.4%) GO:0046872 (0.5%)" "'de novo' pyrimidine nucleobase biosynthetic process (19.9%) 'de novo' UMP biosynthetic process (19.9%) pyrimidine nucleotide biosynthetic process (0.1%)" "cytosol (19.9%) cytoplasm (0.1%)" "dihydroorotase activity (19.9%) zinc ion binding (19.4%) metal ion binding (0.5%)" "IPR004721 (25.5%) IPR002195 (25.4%) IPR032466 (25.2%)" "Dihydroorotase homodimeric type (25.5%) Dihydroorotase, conserved site (25.4%) Metal-dependent hydrolase (25.2%)" WVFTLHNPSVMPFLQYADKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.15.5 (100%) peptidyl-dipeptidase Dcp (100%) GO:0006508 (19.2%) GO:0005829 (19.2%) "GO:0004180 (19.2%) GO:0004222 (19.2%) GO:0046872 (19.2%)" proteolysis (19.2%) cytosol (19.2%) "carboxypeptidase activity (19.2%) metalloendopeptidase activity (19.2%) metal ion binding (19.2%)" "IPR001567 (20%) IPR024077 (20%) IPR024079 (20%)" "Peptidase M3A/M3B catalytic domain (20%) Neurolysin/Thimet oligopeptidase, domain 2 (20%) Metallopeptidase, catalytic domain superfamily (20%)" LSWSSEEVDEKLK root "1.4.1.4 (66.7%) 1.4.1.3 (33.3%)" "glutamate dehydrogenase (NADP(+)) (66.7%) glutamate dehydrogenase [NAD(P)(+)] (33.3%)" GO:0006537 (25.3%) GO:0005829 (25.3%) "GO:0004354 (25.3%) GO:0000166 (24.1%)" glutamate biosynthetic process (25.3%) cytosol (25.3%) "glutamate dehydrogenase (NADP+) activity (25.3%) nucleotide binding (24.1%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" FAADAIMEAADAGIR Bacteria Bacteria "6.2.1.5 (94.3%) 6.2.1.9 (4.7%) 6.2.1.- (0.9%)" "succinate--CoA ligase (ADP-forming) (94.3%) malate--CoA ligase (4.7%) Acid--thiol ligases (0.9%)" GO:0006099 (19.7%) GO:0009361 (19.7%) "GO:0000166 (19.7%) GO:0004775 (19.7%) GO:0004776 (19.7%)" tricarboxylic acid cycle (19.7%) succinate-CoA ligase complex (ADP-forming) (19.7%) "nucleotide binding (19.7%) succinate-CoA ligase (ADP-forming) activity (19.7%) succinate-CoA ligase (GDP-forming) activity (19.7%)" "IPR003781 (15%) IPR005811 (15%) IPR016102 (15%)" "CoA-binding (15%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (15%) Succinyl-CoA synthetase-like (15%)" GCLETYCSATGVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (66.7%) GO:0004340 (33.3%)" "kinase activity (66.7%) glucokinase activity (33.3%)" "IPR000600 (33.4%) IPR049874 (33.4%) IPR043129 (33.2%)" "ROK family (33.4%) ROK, conserved site (33.4%) ATPase, nucleotide binding domain (33.2%)" TTEWSATALMPNSYPGSDEVYKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.23 (100%) beta-galactosidase (100%) "GO:0006004 (24.7%) GO:0016139 (24.7%)" GO:0005764 (24.7%) "GO:0004560 (24.7%) GO:0004565 (1.2%)" "fucose metabolic process (24.7%) glycoside catabolic process (24.7%)" lysosome (24.7%) "alpha-L-fucosidase activity (24.7%) beta-galactosidase activity (1.2%)" "IPR000421 (25%) IPR000933 (25%) IPR008979 (25%)" "Coagulation factor 5/8, C-terminal domain (25%) Glycoside hydrolase, family 29 (25%) Galactose-binding-like domain superfamily (25%)" DHTQPYELGENESHLCLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0019243 (31.6%) GO:0005737 (31.6%) "GO:0004462 (31.6%) GO:0051213 (5.3%)" methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (31.6%) cytoplasm (31.6%) "lactoylglutathione lyase activity (31.6%) dioxygenase activity (5.3%)" "IPR004360 (33.3%) IPR029068 (33.3%) IPR037523 (33.3%)" "Glyoxalase/fosfomycin resistance/dioxygenase domain (33.3%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (33.3%) Vicinal oxygen chelate (VOC), core domain (33.3%)" IVELELNADEK Pseudomonadati Bacteria Pseudomonadati 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25.5%) GO:0006099 (24.5%)" "GO:0004459 (25.5%) GO:0030060 (24.5%)" "lactate metabolic process (25.5%) tricarboxylic acid cycle (24.5%)" "L-lactate dehydrogenase (NAD+) activity (25.5%) L-malate dehydrogenase (NAD+) activity (24.5%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR011275 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 3 (16.7%)" YFRPAEVEQLLGDPTK Bacteria Bacteria 4.2.1.47 (100%) GDP-mannose 4,6-dehydratase (100%) GO:0042351 (33.9%) "GO:0008446 (33.9%) GO:0070401 (31.5%) GO:0016829 (0.7%)" 'de novo' GDP-L-fucose biosynthetic process (33.9%) "GDP-mannose 4,6-dehydratase activity (33.9%) NADP+ binding (31.5%) lyase activity (0.7%)" "IPR006368 (33.4%) IPR016040 (33.4%) IPR036291 (33.2%)" "GDP-mannose 4,6-dehydratase (33.4%) NAD(P)-binding domain (33.4%) NAD(P)-binding domain superfamily (33.2%)" GQGIVLNEPSVVAIRQDR root "GO:0000902 (25.1%) GO:0008360 (25.1%) GO:0043093 (0.1%)" "GO:0005737 (25.1%) GO:0005856 (0.1%) GO:0005886 (0.1%)" "GO:0005524 (24.4%) GO:0042802 (0%)" "cell morphogenesis (25.1%) regulation of cell shape (25.1%) FtsZ-dependent cytokinesis (0.1%)" "cytoplasm (25.1%) cytoskeleton (0.1%) plasma membrane (0.1%)" "ATP binding (24.4%) identical protein binding (0%)" "IPR056546 (33.3%) IPR043129 (33.3%) IPR004753 (33%)" "MreB/MamK-like (33.3%) ATPase, nucleotide binding domain (33.3%) Cell shape determining protein MreB (33%)" IVQAMKDVPVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.3%) GO:0009090 (17.3%) GO:0009088 (13.5%)" GO:0005829 (17.3%) "GO:0004072 (17.3%) GO:0005524 (17.3%)" "lysine biosynthetic process via diaminopimelate (17.3%) homoserine biosynthetic process (17.3%) threonine biosynthetic process (13.5%)" cytosol (17.3%) "aspartate kinase activity (17.3%) ATP binding (17.3%)" "IPR001048 (14.6%) IPR036393 (14.6%) IPR045865 (14.6%)" "Aspartate/glutamate/uridylate kinase (14.6%) Acetylglutamate kinase-like superfamily (14.6%) ACT-like domain (14.6%)" GIASMHCSANTDK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.7%) GO:0005829 (17.7%) "GO:0004612 (17.7%) GO:0005524 (17.7%) GO:0046872 (17.2%)" gluconeogenesis (17.7%) cytosol (17.7%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.7%) ATP binding (17.7%) metal ion binding (17.2%)" "IPR001272 (25.1%) IPR013035 (25.1%) IPR008210 (24.7%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.1%) Phosphoenolpyruvate carboxykinase, C-terminal (25.1%) Phosphoenolpyruvate carboxykinase, N-terminal (24.7%)" SSFQSPSYVSIEMIAAAMGGKPFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (34.6%) "GO:0016616 (30.8%) GO:0016615 (29.8%) GO:0030060 (4.8%)" malate metabolic process (34.6%) "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (30.8%) malate dehydrogenase activity (29.8%) L-malate dehydrogenase (NAD+) activity (4.8%)" "IPR015955 (17%) IPR022383 (17%) IPR001236 (16.5%)" "Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (17%) Lactate/malate dehydrogenase, C-terminal (17%) Lactate/malate dehydrogenase, N-terminal (16.5%)" ELAPNFTQSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.4%) "GO:0022627 (20.4%) GO:0005840 (0.3%)" "GO:0003735 (20.4%) GO:0019843 (20.4%) GO:0003729 (18.3%)" translation (20.4%) "cytosolic small ribosomal subunit (20.4%) ribosome (0.3%)" "structural constituent of ribosome (20.4%) rRNA binding (20.4%) mRNA binding (18.3%)" "IPR001351 (11.2%) IPR004044 (11.2%) IPR005704 (11.2%)" "Small ribosomal subunit protein uS3, C-terminal (11.2%) K Homology domain, type 2 (11.2%) Small ribosomal subunit protein uS3, bacteria (11.2%)" SNVMVIDPETKQPTR Bacillati Bacteria Bacillati GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (19.3%) GO:0003723 (0.7%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (19.3%) RNA binding (0.7%)" "IPR003256 (14.6%) IPR008991 (14.6%) IPR014722 (14.6%)" "Large ribosomal subunit protein uL24 (14.6%) Translation protein SH3-like domain superfamily (14.6%) Large ribosomal subunit protein uL2, domain 2 (14.6%)" VQDEVEIVGLADEPR Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20%) "GO:0000287 (20%) GO:0003746 (20%) GO:0003924 (20%)" cytosol (20%) "magnesium ion binding (20%) translation elongation factor activity (20%) GTPase activity (20%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" FADVACAGPLLAAELDALGK root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.6%) GO:0006094 (16.6%) GO:0008615 (0%)" "GO:0005829 (16.6%) GO:0005737 (0%)" "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "glycolytic process (16.6%) gluconeogenesis (16.6%) pyridoxine biosynthetic process (0%)" "cytosol (16.6%) cytoplasm (0%)" "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (25.2%) IPR015824 (25.2%) IPR036043 (25.2%)" "Phosphoglycerate kinase (25.2%) Phosphoglycerate kinase, N-terminal (25.2%) Phosphoglycerate kinase superfamily (25.2%)" YEIFSEIKPNPTVSNVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.77 (100%) lactaldehyde reductase (100%) "GO:0004022 (38.3%) GO:0046872 (38.3%) GO:0008912 (23.3%)" "alcohol dehydrogenase (NAD+) activity (38.3%) metal ion binding (38.3%) lactaldehyde reductase activity (23.3%)" "IPR001670 (20%) IPR013460 (20%) IPR018211 (20%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (20%) Lactaldehyde reductase (20%) Alcohol dehydrogenase, iron-type, conserved site (20%)" ALSYEYALDLYR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" EGQNLDFVGGAE Bacteria Bacteria "GO:0006412 (19.9%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (20.3%) GO:1990904 (19.8%) GO:0022625 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.9%)" "translation (19.9%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (20.3%) ribonucleoprotein complex (19.8%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%)" "IPR012677 (25%) IPR012678 (25%) IPR013025 (25%)" "Nucleotide-binding alpha-beta plait domain superfamily (25%) Ribosomal protein uL23/eL15/eS24 core domain superfamily (25%) Large ribosomal subunit protein uL23-like (25%)" AGHRPIALVGGATGMIGDPSMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.8%) GO:0005829 (16.8%) "GO:0003723 (16.8%) GO:0004831 (16.8%) GO:0005524 (16.8%)" tyrosyl-tRNA aminoacylation (16.8%) cytosol (16.8%) "RNA binding (16.8%) tyrosine-tRNA ligase activity (16.8%) ATP binding (16.8%)" "IPR001412 (12.6%) IPR002305 (12.6%) IPR002307 (12.6%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.6%) Aminoacyl-tRNA synthetase, class Ic (12.6%) Tyrosine-tRNA ligase (12.6%)" NVAFALATLAGTISK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.2.1 (100%) argininosuccinate lyase (100%) "GO:0042450 (32.9%) GO:0006526 (1.3%)" GO:0005829 (32.9%) GO:0004056 (32.9%) "L-arginine biosynthetic process via ornithine (32.9%) L-arginine biosynthetic process (1.3%)" cytosol (32.9%) argininosuccinate lyase activity (32.9%) "IPR000362 (16.7%) IPR008948 (16.7%) IPR009049 (16.7%)" "Fumarate lyase family (16.7%) L-Aspartase-like (16.7%) Argininosuccinate lyase (16.7%)" LSKENSEIYASLPEGVAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" ELGCPNPQIVLHLDHGDTFETCK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.6%) GO:0030388 (24.6%)" GO:0016020 (1.5%) "GO:0004332 (24.6%) GO:0008270 (24.6%)" "glycolytic process (24.6%) fructose 1,6-bisphosphate metabolic process (24.6%)" membrane (1.5%) "fructose-bisphosphate aldolase activity (24.6%) zinc ion binding (24.6%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" MNLGQIFEAVLGWAGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (18%) GO:0006508 (5%)" GO:0000428 (18%) "GO:0003677 (18%) GO:0003899 (18%) GO:0032549 (18%)" "DNA-templated transcription (18%) proteolysis (5%)" DNA-directed RNA polymerase complex (18%) "DNA binding (18%) DNA-directed RNA polymerase activity (18%) ribonucleoside binding (18%)" "IPR007120 (7.6%) IPR007121 (7.6%) IPR007641 (7.6%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.6%) RNA polymerase, beta subunit, conserved site (7.6%) RNA polymerase Rpb2, domain 7 (7.6%)" KDVNPDEAVAIGAAVQGGVLTGDVK root "GO:0006260 (0.1%) GO:0042026 (0.1%) GO:0051085 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0005524 (25.5%) GO:0140662 (25.5%) GO:0051082 (24.2%)" "DNA replication (0.1%) protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytosol (0.1%) cytoplasm (0%) plasma membrane (0%)" "ATP binding (25.5%) ATP-dependent protein folding chaperone (25.5%) unfolded protein binding (24.2%)" "IPR013126 (17%) IPR018181 (16.9%) IPR043129 (16.9%)" "Heat shock protein 70 family (17%) Heat shock protein 70, conserved site (16.9%) ATPase, nucleotide binding domain (16.9%)" KGTTLQGDLK root 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0019430 (0.1%) GO:0006801 (0.1%) GO:0006979 (0.1%)" "GO:0005737 (33%) GO:0005829 (0.1%)" "GO:0004784 (33%) GO:0030145 (31.8%) GO:0046872 (1.1%)" "removal of superoxide radicals (0.1%) superoxide metabolic process (0.1%) response to oxidative stress (0.1%)" "cytoplasm (33%) cytosol (0.1%)" "superoxide dismutase activity (33%) manganese ion binding (31.8%) metal ion binding (1.1%)" "IPR001189 (16.7%) IPR036314 (16.7%) IPR036324 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, C-terminal domain superfamily (16.7%) Manganese/iron superoxide dismutase, N-terminal domain superfamily (16.7%)" ANATAPAINVIESDKDYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0009408 (100%) response to heat (100%) "IPR002068 (33.6%) IPR008978 (33.6%) IPR031107 (31.9%)" "Alpha crystallin/Hsp20 domain (33.6%) HSP20-like chaperone (33.6%) Small heat shock protein (31.9%)" AELEAIHFFDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.3.3 (100%) N-acetylneuraminate lyase (100%) GO:0005737 (50%) "GO:0016829 (41.4%) GO:0008747 (8.6%)" cytoplasm (50%) "lyase activity (41.4%) N-acetylneuraminate lyase activity (8.6%)" "IPR002220 (50%) IPR013785 (50%)" "DapA-like (50%) Aldolase-type TIM barrel (50%)" IMFPMIISVEEVR root "2.7.3.9 (99.9%) 2.7.-.- (0.1%)" "phosphoenolpyruvate--protein phosphotransferase (99.9%) Transferring phosphorus-containing groups (0.1%)" "GO:0009401 (19.9%) GO:0015764 (0.1%)" "GO:0005737 (19.9%) GO:0005829 (0%)" "GO:0008965 (20.2%) GO:0016301 (19.9%) GO:0046872 (19.9%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (19.9%) N-acetylglucosamine transport (0.1%)" "cytoplasm (19.9%) cytosol (0%)" "phosphoenolpyruvate-protein phosphotransferase activity (20.2%) kinase activity (19.9%) metal ion binding (19.9%)" "IPR000121 (8.5%) IPR015813 (8.5%) IPR040442 (8.5%)" "PEP-utilising enzyme, C-terminal (8.5%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (8.5%) Pyruvate kinase-like domain superfamily (8.5%)" LGDASLSEGLEQHLLGLK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (47.1%) GO:0019288 (0.4%) GO:0042026 (0.4%)" "GO:0005737 (0.4%) GO:0005829 (0.4%)" "GO:0003755 (47.5%) GO:0016853 (1.7%) GO:0046872 (0.4%)" "protein folding (47.1%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (0.4%) protein refolding (0.4%)" "cytoplasm (0.4%) cytosol (0.4%)" "peptidyl-prolyl cis-trans isomerase activity (47.5%) isomerase activity (1.7%) metal ion binding (0.4%)" "IPR001179 (33.5%) IPR046357 (33.5%) IPR048261 (32.7%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (33.5%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.5%) PPIase chaperone SlpA/SlyD-like, insertion domain superfamily (32.7%)" GAFTEAEAEAKFEAWK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" YAIASDKKDFIVATESGILHEMR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.5.1.72 (100%) quinolinate synthase (100%) GO:0034628 (20%) GO:0005829 (20%) "GO:0008987 (20%) GO:0046872 (20%) GO:0051539 (20%)" 'de novo' NAD+ biosynthetic process from L-aspartate (20%) cytosol (20%) "quinolinate synthetase A activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR003473 (33.3%) IPR023066 (33.3%) IPR036094 (33.3%)" "Quinolinate synthetase A (33.3%) Quinolinate synthase A, type 2 (33.3%) Quinolinate synthetase A superfamily (33.3%)" IFCLPDDENAENYIDKYNDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (46.9%) IPR024302 (46.9%) IPR041662 (6.3%)" "Tetratricopeptide-like helical domain superfamily (46.9%) SusD-like (46.9%) SusD-like 2 (6.3%)" LIEMADESVKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.1.- (100%) Transaminases (100%) GO:0006520 (28.1%) "GO:0030170 (28.1%) GO:0008483 (27%) GO:0016829 (15.7%)" amino acid metabolic process (28.1%) "pyridoxal phosphate binding (28.1%) transaminase activity (27%) lyase activity (15.7%)" "IPR004838 (14.4%) IPR004839 (14.4%) IPR015421 (14.4%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (14.4%) Aminotransferase, class I/classII, large domain (14.4%) Pyridoxal phosphate-dependent transferase, major domain (14.4%)" RAYYHETPEILK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%) GO:0019563 (16.5%)" "GO:0005829 (16.5%) GO:0016020 (0.4%)" GO:0004807 (16.5%) "gluconeogenesis (16.5%) glycolytic process (16.5%) glycerol catabolic process (16.5%)" "cytosol (16.5%) membrane (0.4%)" triose-phosphate isomerase activity (16.5%) "IPR000652 (20.1%) IPR013785 (20.1%) IPR035990 (20.1%)" "Triosephosphate isomerase (20.1%) Aldolase-type TIM barrel (20.1%) Triosephosphate isomerase superfamily (20.1%)" IADKTFDSHLFTGTGK root "2.8.1.10 (99.7%) 4.1.99.19 (0.3%)" "thiazole synthase (99.7%) 2-iminoacetate synthase (0.3%)" "GO:0009229 (31.3%) GO:0009228 (5.4%)" "GO:0005737 (30.3%) GO:0005829 (0.1%) GO:1902508 (0.1%)" "GO:1990107 (26.3%) GO:0016783 (5.2%) GO:0016829 (0.5%)" "thiamine diphosphate biosynthetic process (31.3%) thiamine biosynthetic process (5.4%)" "cytoplasm (30.3%) cytosol (0.1%) 2-iminoacetate synthase complex (0.1%)" "thiazole synthase activity (26.3%) sulfurtransferase activity (5.2%) lyase activity (0.5%)" "IPR013785 (33%) IPR033983 (33%) IPR008867 (32.8%)" "Aldolase-type TIM barrel (33%) Thiazole synthase ThiG (33%) Thiazole synthase (32.8%)" NFFNHIDIKK root 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (12.4%) GO:0005737 (1.4%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (12.4%) cytoplasm (1.4%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" QVIQFIDLSLITK root "1.16.-.- (99.6%) 1.16.3.1 (0.4%)" "Oxidizing metal ions (99.6%) ferroxidase (0.4%)" "GO:0006879 (14.3%) GO:0030261 (14.3%) GO:0006950 (0%)" "GO:0005737 (14.3%) GO:0009295 (13.2%) GO:0016020 (0%)" "GO:0008199 (14.7%) GO:0016722 (14.7%) GO:0003677 (14.4%)" "intracellular iron ion homeostasis (14.3%) chromosome condensation (14.3%) response to stress (0%)" "cytoplasm (14.3%) nucleoid (13.2%) membrane (0%)" "ferric iron binding (14.7%) oxidoreductase activity, acting on metal ions (14.7%) DNA binding (14.4%)" "IPR002177 (16.7%) IPR008331 (16.7%) IPR009078 (16.7%)" "DNA-binding protein Dps (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like superfamily (16.7%)" GISYGDGVIPDGVFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0009279 (100%) cell outer membrane (100%) "IPR008969 (14.3%) IPR012910 (14.3%) IPR023996 (14.3%)" "Carboxypeptidase-like, regulatory domain superfamily (14.3%) TonB-dependent receptor, plug domain (14.3%) TonB-dependent outer membrane protein, SusC/RagA (14.3%)" IFGPTAGAAQLEGSK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0009113 (19.8%) GO:0006189 (19%) GO:0006164 (0.9%)" "GO:0004637 (19.8%) GO:0005524 (19.8%) GO:0046872 (19.8%)" "purine nucleobase biosynthetic process (19.8%) 'de novo' IMP biosynthetic process (19%) purine nucleotide biosynthetic process (0.9%)" "phosphoribosylamine-glycine ligase activity (19.8%) ATP binding (19.8%) metal ion binding (19.8%)" "IPR000115 (10.2%) IPR011761 (10.2%) IPR020561 (10.2%)" "Phosphoribosylglycinamide synthetase (10.2%) ATP-grasp fold (10.2%) Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (10.2%)" AIANIETLMNSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25.3%) GO:0016301 (25.3%) GO:0050242 (25.3%)" "ATP binding (25.3%) kinase activity (25.3%) pyruvate, phosphate dikinase activity (25.3%)" "IPR002192 (10.4%) IPR010121 (10.4%) IPR013815 (10.4%)" "Pyruvate phosphate dikinase, AMP/ATP-binding (10.4%) Pyruvate, phosphate dikinase (10.4%) ATP-grasp fold, subdomain 1 (10.4%)" TTEETKFQPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0044281 (33.3%) "GO:0016625 (33.3%) GO:0030976 (33.3%)" small molecule metabolic process (33.3%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (33.3%) thiamine pyrophosphate binding (33.3%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" LQAFEGVVIAIR root "GO:0006412 (32.9%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (32.9%) GO:0005840 (0.6%) GO:0005829 (0.1%)" "GO:0003735 (33%) GO:0016740 (0.1%) GO:0016301 (0%)" "translation (32.9%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (32.9%) ribosome (0.6%) cytosol (0.1%)" "structural constituent of ribosome (33%) transferase activity (0.1%) kinase activity (0%)" "IPR001857 (25%) IPR008991 (25%) IPR038657 (25%)" "Large ribosomal subunit protein bL19 (25%) Translation protein SH3-like domain superfamily (25%) Large ribosomal subunit protein bL19 superfamily (25%)" TVYGKPLVYLDNGATTQKPR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.8.1.7 (100%) cysteine desulfurase (100%) GO:0006534 (32.4%) "GO:0030170 (32.4%) GO:0031071 (32.4%) GO:0008483 (1.9%)" cysteine metabolic process (32.4%) "pyridoxal phosphate binding (32.4%) cysteine desulfurase activity (32.4%) transaminase activity (1.9%)" "IPR000192 (16.7%) IPR010970 (16.7%) IPR015421 (16.7%)" "Aminotransferase class V domain (16.7%) Cysteine desulfurase, SufS (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" SQNYHNVYNPATSFMQPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.7%) GO:0006516 (19.7%)" GO:0005829 (19.7%) "GO:0000224 (19.7%) GO:0030246 (19.7%) GO:0016798 (1.3%)" "carbohydrate metabolic process (19.7%) glycoprotein catabolic process (19.7%)" cytosol (19.7%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.7%) carbohydrate binding (19.7%) hydrolase activity, acting on glycosyl bonds (1.3%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" VINAATDVAHAATLSDEDVAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.24.- (100%) Metalloendopeptidases (100%) GO:0051603 (25%) GO:0016020 (25%) "GO:0004222 (25%) GO:0046872 (25%)" proteolysis involved in protein catabolic process (25%) membrane (25%) "metalloendopeptidase activity (25%) metal ion binding (25%)" "IPR001915 (50%) IPR051156 (50%)" "Peptidase M48 (50%) Mitochondrial and Outer Membrane Metalloprotease (50%)" TGKYDAVIALGTVIR root "2.5.1.78 (99%) 1.1.1.193 (0.3%) 1.1.1.302 (0.3%)" "6,7-dimethyl-8-ribityllumazine synthase (99%) 5-amino-6-(5-phosphoribosylamino)uracil reductase (0.3%) 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase (0.3%)" "GO:0009231 (24.2%) GO:0006353 (0.1%) GO:0009228 (0.1%)" "GO:0009349 (24.2%) GO:0005829 (24.1%) GO:0005737 (0.1%)" "GO:0000906 (24.2%) GO:0016874 (1.7%) GO:0016740 (0.4%)" "riboflavin biosynthetic process (24.2%) DNA-templated transcription termination (0.1%) thiamine biosynthetic process (0.1%)" "riboflavin synthase complex (24.2%) cytosol (24.1%) cytoplasm (0.1%)" "6,7-dimethyl-8-ribityllumazine synthase activity (24.2%) ligase activity (1.7%) transferase activity (0.4%)" "IPR002180 (32.6%) IPR034964 (32.6%) IPR036467 (32.6%)" "Lumazine/riboflavin synthase (32.6%) Lumazine synthase (32.6%) Lumazine/riboflavin synthase superfamily (32.6%)" YTAQDWEGFQELVSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR011990 (49.2%) IPR019734 (47.8%) IPR013105 (3.1%)" "Tetratricopeptide-like helical domain superfamily (49.2%) Tetratricopeptide repeat (47.8%) Tetratricopeptide repeat 2 (3.1%)" VAQNPDVFTDIMIASR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.-.-.- (33.3%) 1.5.1.43 (33.3%) 1.5.1.7 (33.3%)" "Oxidoreductases (33.3%) carboxynorspermidine synthase (33.3%) saccharopine dehydrogenase (NAD(+), L-lysine-forming) (33.3%)" "GO:0004754 (33.3%) GO:0016491 (33.3%) GO:0102143 (33.3%)" "saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (33.3%) oxidoreductase activity (33.3%) carboxynorspermidine dehydrogenase activity (33.3%)" "IPR005097 (33.3%) IPR032095 (33.3%) IPR036291 (33.3%)" "Saccharopine dehydrogenase, NADP binding domain (33.3%) Saccharopine dehydrogenase-like, C-terminal (33.3%) NAD(P)-binding domain superfamily (33.3%)" AIVEVIHQVLR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.2.1.41 (100%) glutamate-5-semialdehyde dehydrogenase (100%) GO:0055129 (25%) GO:0005737 (25%) "GO:0004350 (25%) GO:0050661 (25%)" L-proline biosynthetic process (25%) cytoplasm (25%) "glutamate-5-semialdehyde dehydrogenase activity (25%) NADP binding (25%)" "IPR000965 (16.4%) IPR012134 (16.4%) IPR016161 (16.4%)" "GPR domain (16.4%) Glutamate-5-semialdehyde dehydrogenase (16.4%) Aldehyde/histidinol dehydrogenase (16.4%)" ALNGLQELNLLELHRK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006355 (50%) GO:0003677 (50%) regulation of DNA-templated transcription (50%) DNA binding (50%) "IPR000595 (16.7%) IPR012318 (16.7%) IPR014710 (16.7%)" "Cyclic nucleotide-binding domain (16.7%) Crp-type HTH domain (16.7%) RmlC-like jelly roll fold (16.7%)" KFGEAIFGADK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006412 (19.7%) GO:0042274 (19.7%)" "GO:0015935 (19.7%) GO:0005840 (0.5%) GO:0016020 (0.5%)" "GO:0019843 (20.2%) GO:0003735 (19.7%)" "translation (19.7%) ribosomal small subunit biogenesis (19.7%)" "small ribosomal subunit (19.7%) ribosome (0.5%) membrane (0.5%)" "rRNA binding (20.2%) structural constituent of ribosome (19.7%)" "IPR001912 (17.2%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (17.2%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Homininae Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Euarchontoglires Primates Haplorrhini Simiiformes Hominoidea Hominidae Homininae "GO:0031424 (5.3%) GO:0045109 (5.3%) GO:0051290 (5.3%)" "GO:0005829 (13.7%) GO:0045095 (13.7%) GO:0005886 (9.5%)" "GO:0030280 (5.3%) GO:0046982 (5.3%) GO:0030246 (4.2%)" "keratinization (5.3%) intermediate filament organization (5.3%) protein heterotetramerization (5.3%)" "cytosol (13.7%) keratin filament (13.7%) plasma membrane (9.5%)" "structural constituent of skin epidermis (5.3%) protein heterodimerization activity (5.3%) carbohydrate binding (4.2%)" "IPR003054 (20.3%) IPR032444 (20.3%) IPR032449 (20.3%)" "Keratin, type II (20.3%) Keratin type II head (20.3%) Keratin type II cytoskeletal 1, tail (20.3%)" TPMFVMGVNNESYTSDMQFVSNASCTTNCLAPIAK ACEAECPKLVSISNIAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.3.5.1 (50%) 1.3.99.1 (50%)" "succinate dehydrogenase (50%) Deleted entry (50%)" "GO:0009060 (23.7%) GO:0022904 (23.7%)" "GO:0009055 (23.7%) GO:0051537 (23.7%) GO:0008177 (1.7%)" "aerobic respiration (23.7%) respiratory electron transport chain (23.7%)" "electron transfer activity (23.7%) 2 iron, 2 sulfur cluster binding (23.7%) succinate dehydrogenase (quinone) activity (1.7%)" "IPR009051 (15%) IPR017896 (15%) IPR006058 (14%)" "Alpha-helical ferredoxin (15%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (15%) 2Fe-2S ferredoxin, iron-sulphur binding site (14%)" TALLTSALKDGISSQGGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.4.24.- (57.1%) 3.4.-.- (42.9%)" "Metalloendopeptidases (57.1%) Acting on peptide bonds (peptidases) (42.9%)" GO:0051603 (25.4%) GO:0016020 (25.4%) "GO:0004222 (25.4%) GO:0046872 (23.7%)" proteolysis involved in protein catabolic process (25.4%) membrane (25.4%) "metalloendopeptidase activity (25.4%) metal ion binding (23.7%)" "IPR001915 (50%) IPR051156 (50%)" "Peptidase M48 (50%) Mitochondrial and Outer Membrane Metalloprotease (50%)" FQGGPNAGHTLEFNGEKYVLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (15.7%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (15.7%)" "IPR001114 (14.4%) IPR027417 (14.4%) IPR033128 (14.4%)" "Adenylosuccinate synthetase (14.4%) P-loop containing nucleoside triphosphate hydrolase (14.4%) Adenylosuccinate synthase, active site (14.4%)" LLGTSAWYAPGAAGAYVVESIIHNQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (26.3%) GO:0006099 (23.5%)" "GO:0004459 (26.3%) GO:0030060 (23%) GO:0016491 (0.5%)" "lactate metabolic process (26.3%) tricarboxylic acid cycle (23.5%)" "L-lactate dehydrogenase (NAD+) activity (26.3%) L-malate dehydrogenase (NAD+) activity (23%) oxidoreductase activity (0.5%)" "IPR015955 (17.2%) IPR022383 (17.2%) IPR001236 (16.9%)" "Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (17.2%) Lactate/malate dehydrogenase, C-terminal (17.2%) Lactate/malate dehydrogenase, N-terminal (16.9%)" IILAYEPVWAIGTGK root "5.3.1.1 (98.9%) 2.7.2.3 (1.1%)" "triose-phosphate isomerase (98.9%) phosphoglycerate kinase (1.1%)" "GO:0006094 (16.5%) GO:0006096 (16.5%) GO:0019563 (16.3%)" "GO:0005829 (16.5%) GO:0016020 (0.4%)" "GO:0004807 (16.5%) GO:0004618 (0.2%) GO:0005524 (0.2%)" "gluconeogenesis (16.5%) glycolytic process (16.5%) glycerol catabolic process (16.3%)" "cytosol (16.5%) membrane (0.4%)" "triose-phosphate isomerase activity (16.5%) phosphoglycerate kinase activity (0.2%) ATP binding (0.2%)" "IPR000652 (20.3%) IPR020861 (20.3%) IPR013785 (20.2%)" "Triosephosphate isomerase (20.3%) Triosephosphate isomerase, active site (20.3%) Aldolase-type TIM barrel (20.2%)" LSTIHIEEYECEAR Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.7%) IPR007121 (7.7%) IPR007642 (7.7%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.7%) RNA polymerase, beta subunit, conserved site (7.7%) RNA polymerase Rpb2, domain 2 (7.7%)" DTETDSRLDGLSDAFSVFR root 1.3.5.1 (100%) succinate dehydrogenase (100%) "GO:0022904 (12.5%) GO:0006099 (12.4%) GO:0009060 (0.2%)" "GO:0005743 (0.1%) GO:0005886 (0.1%) GO:0016020 (0.1%)" "GO:0046872 (12.4%) GO:0051537 (12.4%) GO:0051538 (12.4%)" "respiratory electron transport chain (12.5%) tricarboxylic acid cycle (12.4%) aerobic respiration (0.2%)" "mitochondrial inner membrane (0.1%) plasma membrane (0.1%) membrane (0.1%)" "metal ion binding (12.4%) 2 iron, 2 sulfur cluster binding (12.4%) 3 iron, 4 sulfur cluster binding (12.4%)" "IPR009051 (11.4%) IPR050573 (11.4%) IPR004489 (11.3%)" "Alpha-helical ferredoxin (11.4%) Succinate Dehydrogenase/Fumarate Reductase Iron-Sulfur (11.4%) Succinate dehydrogenase/fumarate reductase iron-sulphur protein (11.3%)" ISVAEYNAACR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.4%) GO:0005737 (14.1%) "GO:0004822 (14.5%) GO:0005524 (14.5%) GO:0002161 (14.2%)" isoleucyl-tRNA aminoacylation (14.4%) cytoplasm (14.1%) "isoleucine-tRNA ligase activity (14.5%) ATP binding (14.5%) aminoacyl-tRNA deacylase activity (14.2%)" "IPR002300 (12.8%) IPR023586 (12.8%) IPR014729 (12.7%)" "Aminoacyl-tRNA synthetase, class Ia (12.8%) Isoleucine-tRNA ligase, type 2 (12.8%) Rossmann-like alpha/beta/alpha sandwich fold (12.7%)" EDLLKGNAAIAEEFGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.37 (93.3%) 1.1.1.- (6.7%)" "malate dehydrogenase (93.3%) With NAD(+) or NADP(+) as acceptor (6.7%)" "GO:0006108 (33%) GO:0006099 (1.3%) GO:0019752 (0.3%)" GO:0005737 (1.3%) "GO:0016615 (29.8%) GO:0016616 (29.8%) GO:0030060 (4.4%)" "malate metabolic process (33%) tricarboxylic acid cycle (1.3%) carboxylic acid metabolic process (0.3%)" cytoplasm (1.3%) "malate dehydrogenase activity (29.8%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (29.8%) L-malate dehydrogenase (NAD+) activity (4.4%)" "IPR001236 (17.1%) IPR036291 (17.1%) IPR001557 (16.5%)" "Lactate/malate dehydrogenase, N-terminal (17.1%) NAD(P)-binding domain superfamily (17.1%) L-lactate/malate dehydrogenase (16.5%)" KIIVDTYGGK root 2.5.1.6 (100%) methionine adenosyltransferase (100%) "GO:0006556 (16.7%) GO:0006730 (16.7%)" "GO:0005737 (16.3%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0004478 (16.7%) GO:0005524 (16.7%) GO:0000287 (16.1%)" "S-adenosylmethionine biosynthetic process (16.7%) one-carbon metabolic process (16.7%)" "cytoplasm (16.3%) cytosol (0%) membrane (0%)" "methionine adenosyltransferase activity (16.7%) ATP binding (16.7%) magnesium ion binding (16.1%)" "IPR002133 (16.7%) IPR022630 (16.7%) IPR022631 (16.7%)" "S-adenosylmethionine synthetase (16.7%) S-adenosylmethionine synthetase, C-terminal (16.7%) S-adenosylmethionine synthetase, conserved site (16.7%)" VKPFYRQEDLEGLKTTEGLPGEFPYVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (24.5%) "GO:0004494 (25.5%) GO:0031419 (25.5%) GO:0046872 (24.5%)" lactate fermentation to propionate and acetate (24.5%) "methylmalonyl-CoA mutase activity (25.5%) cobalamin binding (25.5%) metal ion binding (24.5%)" "IPR006099 (25.5%) IPR016176 (25.5%) IPR004608 (24.5%)" "Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25.5%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25.5%) Methylmalonyl-CoA mutase, small subunit (24.5%)" MNVGDKAPELLGINEKGEEVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) "GO:0034599 (25%) GO:0045454 (25%)" GO:0005737 (25%) GO:0008379 (25%) "cellular response to oxidative stress (25%) cell redox homeostasis (25%)" cytoplasm (25%) thioredoxin peroxidase activity (25%) "IPR000866 (20%) IPR013766 (20%) IPR024706 (20%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (20%) Thioredoxin domain (20%) Peroxiredoxin, AhpC-type (20%)" NALLENVTVAADGKIDFADK Prevotellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.5%) GO:0005829 (17.5%) "GO:0004612 (17.5%) GO:0005524 (17.5%) GO:0046872 (17.5%)" gluconeogenesis (17.5%) cytosol (17.5%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.5%) ATP binding (17.5%) metal ion binding (17.5%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" LYNDGLGFRYEFPQQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.2.1.22 (60%) 3.2.1.20 (40%)" "alpha-galactosidase (60%) alpha-glucosidase (40%)" "GO:0030246 (58.2%) GO:0016787 (34.1%) GO:0004557 (4.4%)" "carbohydrate binding (58.2%) hydrolase activity (34.1%) alpha-galactosidase activity (4.4%)" "IPR013785 (14%) IPR014718 (14%) IPR017853 (14%)" "Aldolase-type TIM barrel (14%) Glycoside hydrolase-type carbohydrate-binding (14%) Glycoside hydrolase superfamily (14%)" FGDVANPLLVSVR Bacteria Bacteria 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25.6%) GO:0016301 (25.6%) GO:0050242 (25.6%)" "ATP binding (25.6%) kinase activity (25.6%) pyruvate, phosphate dikinase activity (25.6%)" "IPR002192 (10.8%) IPR010121 (10.8%) IPR013815 (10.8%)" "Pyruvate phosphate dikinase, AMP/ATP-binding (10.8%) Pyruvate, phosphate dikinase (10.8%) ATP-grasp fold, subdomain 1 (10.8%)" GKNVVLIDDIVDTAGTITK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.2%) GO:0006164 (11.2%) GO:0009156 (10.9%)" "GO:0002189 (11.2%) GO:0005737 (11.2%)" "GO:0000287 (11.2%) GO:0004749 (11.2%) GO:0016301 (11.2%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.2%) purine nucleotide biosynthetic process (11.2%) ribonucleoside monophosphate biosynthetic process (10.9%)" "ribose phosphate diphosphokinase complex (11.2%) cytoplasm (11.2%)" "magnesium ion binding (11.2%) ribose phosphate diphosphokinase activity (11.2%) kinase activity (11.2%)" "IPR000836 (20.2%) IPR005946 (20.2%) IPR029057 (20.2%)" "Phosphoribosyltransferase domain (20.2%) Ribose-phosphate pyrophosphokinase (20.2%) Phosphoribosyltransferase-like (20.2%)" QLIVWNPEAEEILGGYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.- (50%) 2.3.2.- (50%)" "Transferring groups other than amino-acyl groups (50%) Aminoacyltransferases (50%)" GO:0006629 (50%) GO:0016746 (50%) lipid metabolic process (50%) acyltransferase activity (50%) "IPR016181 (50%) IPR052351 (50%)" "Acyl-CoA N-acyltransferase (50%) L-ornithine N(alpha)-acyltransferase (50%)" ALYWLQVGAQPTDTTR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (49.3%) IPR023803 (49.3%) IPR020592 (1.5%)" "Small ribosomal subunit protein bS16 (49.3%) Small ribosomal subunit protein bS16 domain superfamily (49.3%) Small ribosomal subunit protein bS16, conserved site (1.5%)" TISSVVNSFFGTNALSQFMDQTNPLAEITHKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.9%) GO:0006508 (2.4%)" GO:0000428 (19.9%) "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (15.4%)" "DNA-templated transcription (19.9%) proteolysis (2.4%)" DNA-directed RNA polymerase complex (19.9%) "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (15.4%)" "IPR007645 (9.9%) IPR015712 (7.6%) IPR007120 (7.5%)" "RNA polymerase Rpb2, domain 3 (9.9%) DNA-directed RNA polymerase, subunit 2 (7.6%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.5%)" NAPFRAPLIITVVAK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.-.-.- (100%) Oxidoreductases (100%) GO:0005829 (0.4%) "GO:0016491 (99%) GO:0000166 (0.2%) GO:0010181 (0.2%)" cytosol (0.4%) "oxidoreductase activity (99%) nucleotide binding (0.2%) FMN binding (0.2%)" "IPR029479 (25.1%) IPR052530 (25.1%) IPR000415 (25%)" "Nitroreductase (25.1%) NAD(P)H nitroreductase (25.1%) Nitroreductase-like (25%)" AKDLETKIEPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" INHSISPMDNPSQIKQQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001854 (50%) IPR036049 (50%)" "Large ribosomal subunit protein uL29 (50%) Large ribosomal subunit protein uL29 superfamily (50%)" ANAIAPGFIITDMTAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) "GO:0006633 (32.1%) GO:0006629 (1.2%) GO:0032787 (1.2%)" "GO:0004316 (32.1%) GO:0051287 (32.1%) GO:0016491 (1.2%)" "fatty acid biosynthetic process (32.1%) lipid metabolic process (1.2%) monocarboxylic acid metabolic process (1.2%)" "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (32.1%) NAD binding (32.1%) oxidoreductase activity (1.2%)" "IPR002347 (16.8%) IPR020904 (16.8%) IPR036291 (16.8%)" "Short-chain dehydrogenase/reductase SDR (16.8%) Short-chain dehydrogenase/reductase, conserved site (16.8%) NAD(P)-binding domain superfamily (16.8%)" KLLPTCYGCFD Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.5%) "GO:0005829 (16.5%) GO:0005960 (16.5%)" "GO:0004375 (16.5%) GO:0016594 (16.5%) GO:0030170 (16.5%)" glycine decarboxylation via glycine cleavage system (16.5%) "cytosol (16.5%) glycine cleavage complex (16.5%)" "glycine dehydrogenase (decarboxylating) activity (16.5%) glycine binding (16.5%) pyridoxal phosphate binding (16.5%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" METTKPSFQDVLEFVR root GO:1903066 (0.2%) "GO:0005829 (99%) GO:0005886 (0.2%) GO:0051286 (0.2%)" "GO:0015297 (0.2%) GO:0042910 (0.2%)" regulation of protein localization to cell tip (0.2%) "cytosol (99%) plasma membrane (0.2%) cell tip (0.2%)" "antiporter activity (0.2%) xenobiotic transmembrane transporter activity (0.2%)" "IPR007458 (50.5%) IPR053375 (49.3%) IPR002528 (0.1%)" "Protein of unknown function DUF496 (50.5%) UPF0265 domain-containing protein (49.3%) Multi antimicrobial extrusion protein (0.1%)" GGMLTNFPTIR Bacteria Bacteria GO:0006412 (33.3%) "GO:0022627 (33.2%) GO:0005840 (0.3%)" GO:0003735 (33.3%) translation (33.3%) "cytosolic small ribosomal subunit (33.2%) ribosome (0.3%)" structural constituent of ribosome (33.3%) "IPR001865 (25.1%) IPR023591 (25.1%) IPR005706 (25.1%)" "Small ribosomal subunit protein uS2 (25.1%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.1%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.1%)" TREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNR root "7.1.2.2 (95.3%) 3.6.3.14 (4.5%) 3.6.1.15 (0.1%)" "H(+)-transporting two-sector ATPase (95.3%) Transferred entry: 7.1.2.2 (4.5%) nucleoside-triphosphate phosphatase (0.1%)" GO:0042777 (0%) "GO:0045259 (24.5%) GO:0005886 (20.4%) GO:0016020 (0%)" "GO:0005524 (24.5%) GO:0046933 (24.5%) GO:0016787 (4.8%)" proton motive force-driven plasma membrane ATP synthesis (0%) "proton-transporting ATP synthase complex (24.5%) plasma membrane (20.4%) membrane (0%)" "ATP binding (24.5%) proton-transporting ATP synthase activity, rotational mechanism (24.5%) hydrolase activity (4.8%)" "IPR000194 (11.9%) IPR050053 (11.9%) IPR027417 (11.9%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11.9%) ATPase alpha/beta chains (11.9%) P-loop containing nucleoside triphosphate hydrolase (11.9%)" IFNCGYAANQAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" TMGKPPVDDDIPAEEQVR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "3.1.3.18 (99.4%) 6.1.1.2 (0.6%)" "phosphoglycolate phosphatase (99.4%) tryptophan--tRNA ligase (0.6%)" "GO:0006281 (16.8%) GO:0005975 (16.2%) GO:0046295 (15.7%)" GO:0005829 (17%) "GO:0008967 (17.2%) GO:0046872 (16.3%) GO:0016787 (0.3%)" "DNA repair (16.8%) carbohydrate metabolic process (16.2%) glycolate biosynthetic process (15.7%)" cytosol (17%) "phosphoglycolate phosphatase activity (17.2%) metal ion binding (16.3%) hydrolase activity (0.3%)" "IPR023198 (16.9%) IPR036412 (16.7%) IPR050155 (16.6%)" "Phosphoglycolate phosphatase-like, domain 2 (16.9%) HAD-like superfamily (16.7%) HAD-like hydrolase superfamily (16.6%)" AIKPVNEADAEKMMEILIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" HAFHSHILTK Pseudomonadati Bacteria Pseudomonadati GO:0006412 (33.2%) "GO:0022625 (33.2%) GO:0005840 (0.2%)" "GO:0003735 (33.2%) GO:0016779 (0.2%)" translation (33.2%) "cytosolic large ribosomal subunit (33.2%) ribosome (0.2%)" "structural constituent of ribosome (33.2%) nucleotidyltransferase activity (0.2%)" "IPR001706 (25%) IPR018265 (25%) IPR021137 (25%)" "Large ribosomal subunit protein bL35 (25%) Large ribosomal subunit protein bL35, conserved site (25%) Large ribosomal subunit protein bL35-like (25%)" YAADMLLADVYMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" INHLIFTNIEMLQHNIEVVTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.7.1.162 (50%) 3.1.6.- (50%)" "N-acetylhexosamine 1-kinase (50%) Sulfuric ester hydrolases (50%)" "GO:0016740 (81.8%) GO:0016301 (9.1%) GO:0016787 (9.1%)" "transferase activity (81.8%) kinase activity (9.1%) hydrolase activity (9.1%)" "IPR002575 (33.3%) IPR011009 (33.3%) IPR050249 (33.3%)" "Aminoglycoside phosphotransferase (33.3%) Protein kinase-like domain superfamily (33.3%) Pseudomonas-type Homoserine Kinase (33.3%)" YTEYQQEQANLPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" ASKYPSMEEAMPEIYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25.3%) GO:0016301 (25.3%) GO:0050242 (25.3%)" "ATP binding (25.3%) kinase activity (25.3%) pyruvate, phosphate dikinase activity (25.3%)" "IPR002192 (10.4%) IPR010121 (10.4%) IPR008279 (10.1%)" "Pyruvate phosphate dikinase, AMP/ATP-binding (10.4%) Pyruvate, phosphate dikinase (10.4%) PEP-utilising enzyme, mobile domain (10.1%)" NGAPIIALNDSGGAR Bacteria Bacteria 6.-.-.- (100%) Ligases (100%) GO:0015977 (22.8%) GO:0009317 (22.8%) "GO:0004658 (23.8%) GO:0003989 (22.8%) GO:0016740 (7.9%)" carbon fixation (22.8%) acetyl-CoA carboxylase complex (22.8%) "propionyl-CoA carboxylase activity (23.8%) acetyl-CoA carboxylase activity (22.8%) transferase activity (7.9%)" "IPR011762 (20.1%) IPR029045 (20.1%) IPR034733 (20.1%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20.1%) ClpP/crotonase-like domain superfamily (20.1%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.1%)" ALEGTGVPLIADGGLR root 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (19.9%)" "GO:0005737 (0%) GO:0005886 (0%)" "GO:0003938 (20%) GO:0046872 (20%) GO:0000166 (19.6%)" "GMP biosynthetic process (20%) GTP biosynthetic process (19.9%)" "cytoplasm (0%) plasma membrane (0%)" "IMP dehydrogenase activity (20%) metal ion binding (20%) nucleotide binding (19.6%)" "IPR001093 (16.7%) IPR005990 (16.7%) IPR015875 (16.7%)" "IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%) IMP dehydrogenase / GMP reductase, conserved site (16.7%)" VMIHQPMGGAQGQASDIEITAR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.4.21.92 (100%) endopeptidase Clp (100%) GO:0006515 (16.6%) "GO:0005737 (16.6%) GO:0009368 (16.6%) GO:0016020 (0.5%)" "GO:0004176 (16.6%) GO:0004252 (16.6%) GO:0051117 (16.6%)" protein quality control for misfolded or incompletely synthesized proteins (16.6%) "cytoplasm (16.6%) endopeptidase Clp complex (16.6%) membrane (0.5%)" "ATP-dependent peptidase activity (16.6%) serine-type endopeptidase activity (16.6%) ATPase binding (16.6%)" "IPR001907 (30%) IPR023562 (30%) IPR029045 (30%)" "ATP-dependent Clp protease proteolytic subunit (30%) Clp protease proteolytic subunit /Translocation-enhancing protein TepA (30%) ClpP/crotonase-like domain superfamily (30%)" QIIIATGEGAK root "1.8.1.- (92.2%) 1.11.1.15 (4.3%) 1.-.-.- (0.9%)" "With NAD(+) or NADP(+) as acceptor (92.2%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (4.3%) Oxidoreductases (0.9%)" "GO:0000302 (13.9%) GO:0045454 (0%) GO:0006979 (0%)" "GO:0005829 (14.3%) GO:0032991 (14.3%) GO:0009321 (0%)" "GO:0016668 (14.3%) GO:0050660 (14.1%) GO:0051287 (13.9%)" "response to reactive oxygen species (13.9%) cell redox homeostasis (0%) response to oxidative stress (0%)" "cytosol (14.3%) protein-containing complex (14.3%) alkyl hydroperoxide reductase complex (0%)" "oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (14.3%) flavin adenine dinucleotide binding (14.1%) NAD binding (13.9%)" "IPR036188 (11.7%) IPR023753 (11.7%) IPR050097 (11.6%)" "FAD/NAD(P)-binding domain superfamily (11.7%) FAD/NAD(P)-binding domain (11.7%) Ferredoxin--NADP reductase type 2 (11.6%)" ILKGEGVGLSYMGIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) "GO:0006633 (20%) GO:0044550 (20%)" GO:0005737 (20%) "GO:0004315 (20%) GO:0033818 (20%)" "fatty acid biosynthetic process (20%) secondary metabolite biosynthetic process (20%)" cytoplasm (20%) "3-oxoacyl-[acyl-carrier-protein] synthase activity (20%) beta-ketoacyl-acyl-carrier-protein synthase III activity (20%)" "IPR004655 (25%) IPR013747 (25%) IPR013751 (25%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III (25%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (25%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (25%)" ELTGLGLKEAKDMVDSAPSAIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" GAYEITPFYATDER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.1.3.13 (100%) dTDP-4-dehydrorhamnose 3,5-epimerase (100%) "GO:0000271 (25%) GO:0019305 (25%)" GO:0005829 (25%) GO:0008830 (25%) "polysaccharide biosynthetic process (25%) dTDP-rhamnose biosynthetic process (25%)" cytosol (25%) dTDP-4-dehydrorhamnose 3,5-epimerase activity (25%) "IPR000888 (33.3%) IPR011051 (33.3%) IPR014710 (33.3%)" "dTDP-4-dehydrorhamnose 3,5-epimerase-like (33.3%) RmlC-like cupin domain superfamily (33.3%) RmlC-like jelly roll fold (33.3%)" MVDKVVGATAKDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" SATGQPITTYTSQYRNPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (33.3%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (33.3%)" "IPR003741 (12.7%) IPR004452 (12.7%) IPR009051 (12.7%)" "LUD domain (12.7%) L-lactate oxidation iron-sulfur protein LutB/LldF (12.7%) Alpha-helical ferredoxin (12.7%)" AKPVLLEPIMKVEVETPEENTGDVIGDLSR root 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0032790 (16.9%) GO:0006414 (0%)" "GO:0005737 (15.8%) GO:0005829 (0.1%) GO:0005739 (0%)" "GO:0003746 (17.3%) GO:0005525 (16.9%) GO:0003924 (16.2%)" "ribosome disassembly (16.9%) translational elongation (0%)" "cytoplasm (15.8%) cytosol (0.1%) mitochondrion (0%)" "translation elongation factor activity (17.3%) GTP binding (16.9%) GTPase activity (16.2%)" "IPR000640 (6.4%) IPR035647 (6.4%) IPR014721 (6.4%)" "Elongation factor EFG, domain V-like (6.4%) EF-G domain III/V-like (6.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.4%)" YSSGIELNAVQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19%) GO:0006164 (1.2%)" GO:0005737 (20.1%) "GO:0004642 (20.1%) GO:0046872 (19.6%) GO:0005524 (19.5%)" "'de novo' IMP biosynthetic process (19%) purine nucleotide biosynthetic process (1.2%)" cytoplasm (20.1%) "phosphoribosylformylglycinamidine synthase activity (20.1%) metal ion binding (19.6%) ATP binding (19.5%)" "IPR010918 (11.3%) IPR036676 (11.3%) IPR036921 (11.3%)" "PurM-like, C-terminal domain (11.3%) PurM-like, C-terminal domain superfamily (11.3%) PurM-like, N-terminal domain superfamily (11.3%)" FLTDTRDMLVER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" HKATLLGLGLR Pseudomonadati Bacteria Pseudomonadati "GO:0006412 (33%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (32.4%) GO:0005840 (0.8%) GO:0015934 (0.6%)" GO:0003735 (33%) "translation (33%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (32.4%) ribosome (0.8%) large ribosomal subunit (0.6%)" structural constituent of ribosome (33%) "IPR005996 (25.1%) IPR016082 (25.1%) IPR036919 (25.1%)" "Large ribosomal subunit protein uL30, bacteria (25.1%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (25.1%) Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily (25.1%)" ALGAKPQINAEEEIRR Bacteria Bacteria 6.3.1.5 (100%) NAD(+) synthase (100%) "GO:0009435 (14.1%) GO:0006974 (0.1%) GO:0034355 (0.1%)" "GO:0005737 (14.1%) GO:0005829 (0.1%)" "GO:0008795 (14.5%) GO:0003952 (14.2%) GO:0004359 (14.2%)" "NAD+ biosynthetic process (14.1%) DNA damage response (0.1%) NAD+ biosynthetic process via the salvage pathway (0.1%)" "cytoplasm (14.1%) cytosol (0.1%)" "NAD+ synthase activity (14.5%) NAD+ synthase (glutamine-hydrolyzing) activity (14.2%) glutaminase activity (14.2%)" "IPR003694 (25.3%) IPR014729 (25.3%) IPR022310 (25.3%)" "NAD(+) synthetase (25.3%) Rossmann-like alpha/beta/alpha sandwich fold (25.3%) NAD/GMP synthase (25.3%)" LSDQEIEQTLQAFEAR root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (35.3%) GO:0042026 (0.2%)" "GO:0030313 (14.5%) GO:0042597 (13.1%) GO:0030288 (0.2%)" "GO:0003755 (35.5%) GO:0016853 (1.1%) GO:0044183 (0.2%)" "protein folding (35.3%) protein refolding (0.2%)" "cell envelope (14.5%) periplasmic space (13.1%) outer membrane-bounded periplasmic space (0.2%)" "peptidyl-prolyl cis-trans isomerase activity (35.5%) isomerase activity (1.1%) protein folding chaperone (0.2%)" "IPR000774 (25.2%) IPR036944 (25.2%) IPR046357 (24.9%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25.2%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25.2%) Peptidyl-prolyl cis-trans isomerase domain superfamily (24.9%)" KQEYVIETHDQYPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR021474 (100%) Protein of unknown function DUF3127 (100%) MGNLKELASMIPGVGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) "GO:0048500 (19.3%) GO:0005786 (0.6%)" "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (20%)" SRP-dependent cotranslational protein targeting to membrane (20%) "signal recognition particle (19.3%) signal recognition particle, endoplasmic reticulum targeting (0.6%)" "GTPase activity (20%) GTP binding (20%) 7S RNA binding (20%)" "IPR004125 (11.3%) IPR022941 (11.3%) IPR036891 (11.3%)" "Signal recognition particle, SRP54 subunit, M-domain (11.3%) Signal recognition particle, SRP54 subunit (11.3%) Signal recognition particle, SRP54 subunit, M-domain superfamily (11.3%)" YDLPQVYHPVSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.1.1 (100%) asparaginase (100%) GO:0009066 (50%) GO:0004067 (50%) obsolete aspartate family amino acid metabolic process (50%) asparaginase activity (50%) "IPR006033 (10%) IPR006034 (10%) IPR020827 (10%)" "Type I L-asparaginase family (10%) Asparaginase/glutaminase-like (10%) Asparaginase/glutaminase, active site 1 (10%)" VEISSDSHPFYTGK Bacilli Bacteria Bacillati Bacillota Bacilli GO:0006412 (24.9%) "GO:0005840 (25.2%) GO:1990904 (24.9%)" GO:0003735 (24.9%) translation (24.9%) "ribosome (25.2%) ribonucleoprotein complex (24.9%)" structural constituent of ribosome (24.9%) "IPR002150 (25%) IPR027493 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL31 type A/B (25%) Large ribosomal subunit protein bL31 type B (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" GITYTNFGPGMSMGHTVAVK Bacteria Bacteria 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0047850 (25%) GO:0000166 (24.8%) GO:0008839 (0.1%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "diaminopimelate dehydrogenase activity (25%) nucleotide binding (24.8%) 4-hydroxy-tetrahydrodipicolinate reductase (0.1%)" "IPR010190 (25.1%) IPR032094 (25.1%) IPR036291 (25%)" "Diaminopimelate dehydrogenase, Ddh (25.1%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25.1%) NAD(P)-binding domain superfamily (25%)" VGIVYNYANASDLPAK root 3.5.1.1 (100%) asparaginase (100%) "GO:0006528 (32.8%) GO:0006530 (0.2%) GO:0051289 (0.1%)" "GO:0042597 (32.3%) GO:0030313 (0.6%) GO:0030288 (0.1%)" "GO:0004067 (33.6%) GO:0016787 (0.3%) GO:0042802 (0.1%)" "asparagine metabolic process (32.8%) L-asparagine catabolic process (0.2%) protein homotetramerization (0.1%)" "periplasmic space (32.3%) cell envelope (0.6%) outer membrane-bounded periplasmic space (0.1%)" "asparaginase activity (33.6%) hydrolase activity (0.3%) identical protein binding (0.1%)" "IPR006034 (11.3%) IPR036152 (11.3%) IPR027474 (11.2%)" "Asparaginase/glutaminase-like (11.3%) Asparaginase/glutaminase-like superfamily (11.3%) L-asparaginase, N-terminal (11.2%)" IGIQPGHIHKPGK root 6.2.1.5 (100%) succinate--CoA ligase (ADP-forming) (100%) GO:0006099 (19.8%) "GO:0009361 (19.8%) GO:0005739 (0.9%) GO:0005737 (0.2%)" "GO:0004775 (19.8%) GO:0004776 (19.8%) GO:0000166 (19.1%)" tricarboxylic acid cycle (19.8%) "succinate-CoA ligase complex (ADP-forming) (19.8%) mitochondrion (0.9%) cytoplasm (0.2%)" "succinate-CoA ligase (ADP-forming) activity (19.8%) succinate-CoA ligase (GDP-forming) activity (19.8%) nucleotide binding (19.1%)" "IPR016102 (14.9%) IPR003781 (14.5%) IPR036291 (14.5%)" "Succinyl-CoA synthetase-like (14.9%) CoA-binding (14.5%) NAD(P)-binding domain superfamily (14.5%)" TFEAYKSEHIQER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.5%) GO:0044210 (11.5%)" "GO:0005829 (11.5%) GO:0097268 (11.5%)" "GO:0003883 (11.5%) GO:0005524 (11.5%) GO:0042802 (11.5%)" "pyrimidine nucleobase biosynthetic process (11.5%) 'de novo' CTP biosynthetic process (11.5%)" "cytosol (11.5%) cytoophidium (11.5%)" "CTP synthase activity (11.5%) ATP binding (11.5%) identical protein binding (11.5%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" HISPEWIEKVNEIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) GO:0042777 (23.6%) "GO:0005524 (23.6%) GO:0046933 (23.6%) GO:0046961 (23.6%)" proton motive force-driven plasma membrane ATP synthesis (23.6%) "ATP binding (23.6%) proton-transporting ATP synthase activity, rotational mechanism (23.6%) proton-transporting ATPase activity, rotational mechanism (23.6%)" "IPR000194 (14.3%) IPR004100 (14.3%) IPR020003 (14.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (14.3%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (14.3%)" MKEIDWANLSFGYMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (19.9%) GO:0009098 (19.9%) GO:0009099 (19.9%)" "GO:0004084 (18.3%) GO:0052654 (5.1%) GO:0052655 (5.1%)" "isoleucine biosynthetic process (19.9%) L-leucine biosynthetic process (19.9%) L-valine biosynthetic process (19.9%)" "branched-chain-amino-acid transaminase activity (18.3%) L-leucine-2-oxoglutarate transaminase activity (5.1%) L-valine-2-oxoglutarate transaminase activity (5.1%)" "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" LVEPERIFTFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (25.6%) GO:0005829 (24.8%) "GO:0004354 (25.6%) GO:0000166 (23.9%)" glutamate biosynthetic process (25.6%) cytosol (24.8%) "glutamate dehydrogenase (NADP+) activity (25.6%) nucleotide binding (23.9%)" "IPR006097 (12.8%) IPR046346 (12.8%) IPR050724 (12.8%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.8%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (12.8%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (12.8%)" IVEESPSPFITPELRQEMGEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.3.4.14 (87%) 6.4.1.2 (13%)" "biotin carboxylase (87%) acetyl-CoA carboxylase (13%)" GO:2001295 (13.9%) "GO:0005524 (24.4%) GO:0046872 (24.4%) GO:0003989 (15%)" malonyl-CoA biosynthetic process (13.9%) "ATP binding (24.4%) metal ion binding (24.4%) acetyl-CoA carboxylase activity (15%)" "IPR005479 (13.3%) IPR011761 (13.3%) IPR011764 (13.3%)" "Carbamoyl phosphate synthase, ATP-binding domain (13.3%) ATP-grasp fold (13.3%) Biotin carboxylation domain (13.3%)" SGADFFEVVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.3%) GO:0005737 (18.9%) "GO:0003746 (20.4%) GO:0005525 (20.3%) GO:0003924 (20.1%)" ribosome disassembly (20.3%) cytoplasm (18.9%) "translation elongation factor activity (20.4%) GTP binding (20.3%) GTPase activity (20.1%)" "IPR027417 (6.4%) IPR000795 (6.3%) IPR005225 (6.3%)" "P-loop containing nucleoside triphosphate hydrolase (6.4%) Translational (tr)-type GTP-binding domain (6.3%) Small GTP-binding domain (6.3%)" EGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNR root "7.1.2.2 (95.1%) 3.6.3.14 (4.7%) 3.6.1.15 (0.1%)" "H(+)-transporting two-sector ATPase (95.1%) Transferred entry: 7.1.2.2 (4.7%) nucleoside-triphosphate phosphatase (0.1%)" GO:0042777 (0%) "GO:0045259 (24.5%) GO:0005886 (20.3%) GO:0016020 (0%)" "GO:0005524 (24.5%) GO:0046933 (24.5%) GO:0016787 (4.8%)" proton motive force-driven plasma membrane ATP synthesis (0%) "proton-transporting ATP synthase complex (24.5%) plasma membrane (20.3%) membrane (0%)" "ATP binding (24.5%) proton-transporting ATP synthase activity, rotational mechanism (24.5%) hydrolase activity (4.8%)" "IPR000194 (12%) IPR050053 (12%) IPR027417 (12%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (12%) ATPase alpha/beta chains (12%) P-loop containing nucleoside triphosphate hydrolase (12%)" SCMGLTGCGTIDELR root 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (20.3%) GO:0006177 (18.9%) GO:0009411 (0.1%)" "GO:0005737 (0.1%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0046872 (20.5%) GO:0003938 (20.3%) GO:0000166 (17.7%)" "GTP biosynthetic process (20.3%) GMP biosynthetic process (18.9%) response to UV (0.1%)" "cytoplasm (0.1%) cytosol (0.1%) plasma membrane (0.1%)" "metal ion binding (20.5%) IMP dehydrogenase activity (20.3%) nucleotide binding (17.7%)" "IPR001093 (17.6%) IPR013785 (17.6%) IPR005990 (17.3%)" "IMP dehydrogenase/GMP reductase (17.6%) Aldolase-type TIM barrel (17.6%) Inosine-5'-monophosphate dehydrogenase (17.3%)" ELTECVEDMLEPTVGYSQDYGHANK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" GRPSSNIYGGQIR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0033104 (100%) type VI protein secretion system complex (100%) IPR041408 (100%) Hemolysin coregulated protein (Hcp) TssD (100%) DNLVTKPDPIPYPSTK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR025632 (100%) Protein of unknown function DUF4290 (100%) RHEAWITLEK root "GO:0006412 (24.7%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.7%) GO:0005840 (0.6%) GO:0005737 (0%)" "GO:0003729 (24.7%) GO:0003735 (24.7%) GO:0016491 (0.1%)" "translation (24.7%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.7%) ribosome (0.6%) cytoplasm (0%)" "mRNA binding (24.7%) structural constituent of ribosome (24.7%) oxidoreductase activity (0.1%)" "IPR012340 (20.2%) IPR035104 (20.2%) IPR003029 (20.2%)" "Nucleic acid-binding, OB-fold (20.2%) Ribosomal protein S1-like (20.2%) S1 domain (20.2%)" AYDFFEQYLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" DTMGGLFTLDPRPITDEEILHIFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.1 (66.7%) 1.1.1.202 (33.3%)" "alcohol dehydrogenase (66.7%) 1,3-propanediol dehydrogenase (33.3%)" "GO:0004022 (48.3%) GO:0046872 (48.3%) GO:0047516 (3.4%)" "alcohol dehydrogenase (NAD+) activity (48.3%) metal ion binding (48.3%) 1,3-propanediol dehydrogenase activity (3.4%)" "IPR001670 (33.3%) IPR039697 (33.3%) IPR056798 (33.3%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (33.3%) Iron-type alcohol dehydrogenase-like (33.3%) Fe-containing alcohol dehydrogenase-like, C-terminal (33.3%)" AILDFNGSGLSVLEVSHR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.8%) GO:0008615 (19.8%)" GO:0005737 (19.8%) "GO:0004648 (19.8%) GO:0030170 (19.8%) GO:0008483 (1.2%)" "L-serine biosynthetic process (19.8%) pyridoxine biosynthetic process (19.8%)" cytoplasm (19.8%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.8%) pyridoxal phosphate binding (19.8%) transaminase activity (1.2%)" "IPR000192 (20%) IPR015421 (20%) IPR015422 (20%)" "Aminotransferase class V domain (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" VKEAQAAAEQLK root "GO:0022900 (19.9%) GO:0006508 (0.2%) GO:0071555 (0.2%)" "GO:0042597 (19.5%) GO:0005829 (0.2%)" "GO:0005506 (19.9%) GO:0009055 (19.9%) GO:0020037 (19.9%)" "electron transport chain (19.9%) proteolysis (0.2%) cell wall organization (0.2%)" "periplasmic space (19.5%) cytosol (0.2%)" "iron ion binding (19.9%) electron transfer activity (19.9%) heme binding (19.9%)" "IPR009155 (47.7%) IPR010980 (47.7%) IPR000713 (0.4%)" "Cytochrome b562 (47.7%) Cytochrome c/b562 (47.7%) Mur ligase, N-terminal catalytic domain (0.4%)" GLLPDRFCILGAAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.49 (100%) glucose-6-phosphate dehydrogenase (NADP(+)) (100%) "GO:0006006 (20%) GO:0009051 (20%)" GO:0005829 (20%) "GO:0004345 (20%) GO:0050661 (20%)" "glucose metabolic process (20%) pentose-phosphate shunt, oxidative branch (20%)" cytosol (20%) "glucose-6-phosphate dehydrogenase activity (20%) NADP binding (20%)" "IPR001282 (20%) IPR019796 (20%) IPR022674 (20%)" "Glucose-6-phosphate dehydrogenase (20%) Glucose-6-phosphate dehydrogenase, active site (20%) Glucose-6-phosphate dehydrogenase, NAD-binding (20%)" AVDANNALDGEGPFSPER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.7 (100%) butyrate kinase (100%) GO:0006083 (20%) GO:0005737 (20%) "GO:0005524 (20%) GO:0008776 (20%) GO:0047761 (20%)" acetate metabolic process (20%) cytoplasm (20%) "ATP binding (20%) acetate kinase activity (20%) butyrate kinase activity (20%)" "IPR000890 (25%) IPR011245 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Butyrate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" IIGDNTDKHCQAYFSYDSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (75.5%) 1.2.7.- (20.4%) 1.2.1.51 (4.1%)" "pyruvate synthase (75.5%) With an iron-sulfur protein as acceptor (20.4%) pyruvate dehydrogenase (NADP(+)) (4.1%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (11.6%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.6%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (11.6%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.6%)" "IPR002869 (7.8%) IPR009014 (7.8%) IPR019752 (7.8%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.8%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (7.8%)" RSDIEIVAINDLLDADYMAYMLK root "1.2.1.- (81%) 1.2.1.12 (19%)" "With NAD(+) or NADP(+) as acceptor (81%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (19%)" "GO:0072524 (19.5%) GO:0006006 (18.5%) GO:0006096 (0.6%)" "GO:0005737 (0.5%) GO:0005576 (0.1%) GO:0005829 (0.1%)" "GO:0051287 (20.8%) GO:0050661 (18.5%) GO:0004365 (14.2%)" "pyridine-containing compound metabolic process (19.5%) glucose metabolic process (18.5%) glycolytic process (0.6%)" "cytoplasm (0.5%) extracellular region (0.1%) cytosol (0.1%)" "NAD binding (20.8%) NADP binding (18.5%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (14.2%)" "IPR020828 (17.3%) IPR020831 (17.3%) IPR036291 (17.3%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17.3%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.3%) NAD(P)-binding domain superfamily (17.3%)" GVIVSVGGQIPNNLAMK Pseudomonadati Bacteria Pseudomonadati "6.3.5.5 (80.7%) 6.3.4.16 (19.3%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (80.7%) carbamoyl-phosphate synthase (ammonia) (19.3%)" "GO:0006541 (14%) GO:0006221 (11.9%) GO:0006526 (11.8%)" GO:0005737 (14%) "GO:0004088 (14%) GO:0005524 (14%) GO:0046872 (13.9%)" "glutamine metabolic process (14%) pyrimidine nucleotide biosynthetic process (11.9%) L-arginine biosynthetic process (11.8%)" cytoplasm (14%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14%) ATP binding (14%) metal ion binding (13.9%)" "IPR005479 (10.1%) IPR005480 (10.1%) IPR011761 (10.1%)" "Carbamoyl phosphate synthase, ATP-binding domain (10.1%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10.1%) ATP-grasp fold (10.1%)" MDALELLINRR root 1.-.-.- (100%) Oxidoreductases (100%) GO:0005829 (0.6%) "GO:0016491 (98.8%) GO:0010181 (0.3%) GO:0042803 (0.3%)" cytosol (0.6%) "oxidoreductase activity (98.8%) FMN binding (0.3%) protein homodimerization activity (0.3%)" "IPR029479 (25.2%) IPR052530 (25.2%) IPR000415 (25.2%)" "Nitroreductase (25.2%) NAD(P)H nitroreductase (25.2%) Nitroreductase-like (25.2%)" DIYAIVPDDFHGVTPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (25%) IPR022615 (25%) IPR056147 (25%)" "Na(+)-translocating NADH-quinone reductase subunit A (25%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (25%) NqrA, N-terminal barrel-sandwich hybrid domain (25%)" MDADVPLVVPEVNPEDALNRPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000319 (16.7%) IPR000534 (16.7%) IPR005986 (16.7%)" "Aspartate-semialdehyde dehydrogenase, conserved site (16.7%) Semialdehyde dehydrogenase, NAD-binding (16.7%) Aspartate-semialdehyde dehydrogenase, beta-type (16.7%)" NGDIYPTHGIGPIANCMDINR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.2.1.49 (100%) alpha-N-acetylgalactosaminidase (100%) "GO:0000166 (50%) GO:0016798 (37.5%) GO:0008456 (12.5%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (37.5%) alpha-N-acetylgalactosaminidase activity (12.5%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" HVMSPAPFEDSAWQCTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.4.1.320 (50%) 2.4.1.- (25%) 2.4.1.319 (25%)" "1,4-beta-mannosyl-N-acetylglucosamine phosphorylase (50%) Hexosyltransferases (25%) beta-1,4-mannooligosaccharide phosphorylase (25%)" "GO:0016757 (76.7%) GO:0016798 (13.3%) GO:0016787 (10%)" "glycosyltransferase activity (76.7%) hydrolase activity, acting on glycosyl bonds (13.3%) hydrolase activity (10%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" LTQPIKDINIIGNGPK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 3.4.-.- (100%) Acting on peptide bonds (peptidases) (100%) GO:0006508 (33.3%) GO:0005829 (33.3%) GO:0008237 (33.3%) proteolysis (33.3%) cytosol (33.3%) metallopeptidase activity (33.3%) "IPR036059 (13.9%) IPR045569 (13.9%) IPR051463 (13.9%)" "Metalloprotease TldD/PmbA superfamily (13.9%) Metalloprotease TldD/E, C-terminal domain (13.9%) Peptidase U62 metalloprotease (13.9%)" IMSSLEAKHPGESEYLQAVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.4.1.4 (72.7%) 1.4.1.2 (27.3%)" "glutamate dehydrogenase (NADP(+)) (72.7%) glutamate dehydrogenase (27.3%)" GO:0006537 (25.6%) GO:0005829 (25.6%) "GO:0004354 (25.6%) GO:0000166 (22.5%) GO:0004352 (0.7%)" glutamate biosynthetic process (25.6%) cytosol (25.6%) "glutamate dehydrogenase (NADP+) activity (25.6%) nucleotide binding (22.5%) glutamate dehydrogenase (NAD+) activity (0.7%)" "IPR006095 (11.2%) IPR006097 (11.2%) IPR033524 (11.2%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.2%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.2%) Leu/Phe/Val dehydrogenases active site (11.2%)" EGEPTQSVADQEAIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" VGEKVEEVKGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR024623 (100%) Uncharacterised protein family YtxH (100%) TIYGDLDPTTGNITLGPGER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003439 (20%) IPR003593 (20%) IPR027417 (20%)" "ABC transporter-like, ATP-binding domain (20%) AAA+ ATPase domain (20%) P-loop containing nucleoside triphosphate hydrolase (20%)" ELLERVDAEVAAYDQKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001854 (50%) IPR036049 (50%)" "Large ribosomal subunit protein uL29 (50%) Large ribosomal subunit protein uL29 superfamily (50%)" ARFWMTFGQEYLTHLR Pseudomonadati Bacteria Pseudomonadati "1.5.1.7 (53.6%) 1.5.1.43 (32.1%) 1.-.-.- (10.7%)" "saccharopine dehydrogenase (NAD(+), L-lysine-forming) (53.6%) carboxynorspermidine synthase (32.1%) Oxidoreductases (10.7%)" "GO:0004754 (42.1%) GO:0102143 (31.6%) GO:0016491 (24.6%)" "saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (42.1%) carboxynorspermidine dehydrogenase activity (31.6%) oxidoreductase activity (24.6%)" "IPR032095 (34.1%) IPR005097 (33%) IPR036291 (32.9%)" "Saccharopine dehydrogenase-like, C-terminal (34.1%) Saccharopine dehydrogenase, NADP binding domain (33%) NAD(P)-binding domain superfamily (32.9%)" SQEAVQEAINLAQSR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0034605 (19.6%) GO:0042026 (19.6%) GO:0006508 (1.1%)" GO:0005737 (19.6%) "GO:0005524 (19.6%) GO:0016887 (19.6%) GO:0008233 (1.1%)" "cellular response to heat (19.6%) protein refolding (19.6%) proteolysis (1.1%)" cytoplasm (19.6%) "ATP binding (19.6%) ATP hydrolysis activity (19.6%) peptidase activity (1.1%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" YNPALEAEGKNPFTLDSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (77.3%) 1.2.7.- (22.7%)" "pyruvate synthase (77.3%) With an iron-sulfur protein as acceptor (22.7%)" "GO:0006979 (14.7%) GO:0022900 (14.5%) GO:0044281 (11.8%)" "GO:0030976 (14.7%) GO:0005506 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.7%) electron transport chain (14.5%) small molecule metabolic process (11.8%)" "thiamine pyrophosphate binding (14.7%) iron ion binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR011766 (7.8%) IPR017896 (7.8%) IPR017900 (7.8%)" "Thiamine pyrophosphate enzyme, TPP-binding (7.8%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (7.8%) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (7.8%)" YFYSEGYEDRFAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" VLSMYQDPEQRETEIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (51.1%) IPR019734 (48.9%)" "Tetratricopeptide-like helical domain superfamily (51.1%) Tetratricopeptide repeat (48.9%)" RGSFVYVTPNTNFVSVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR025347 (100%) Protein of unknown function DUF4251 (100%) TVTGGYAQSDAQGQMNK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0009279 (50%) GO:0044384 (50%)" "cell outer membrane (50%) host outer membrane (50%)" "IPR000758 (25.5%) IPR051723 (25.5%) IPR011250 (25.2%)" "Virulence-related outer membrane protein (25.5%) Bacterial Outer Membrane Invasion-Related Protein (25.5%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (25.2%)" TSELKASYPPYFISK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "5.4.2.10 (71.4%) 5.4.2.2 (28.6%)" "phosphoglucosamine mutase (71.4%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (28.6%)" "GO:0005975 (13.7%) GO:0006048 (13.7%) GO:0009252 (13.7%)" GO:0005829 (13.7%) "GO:0000287 (13.7%) GO:0004615 (13.7%) GO:0008966 (13.7%)" "carbohydrate metabolic process (13.7%) UDP-N-acetylglucosamine biosynthetic process (13.7%) peptidoglycan biosynthetic process (13.7%)" cytosol (13.7%) "magnesium ion binding (13.7%) phosphomannomutase activity (13.7%) phosphoglucosamine mutase activity (13.7%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" YKEVLADPNEPIRLNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.99.- (96.9%) 5.4.99.22 (3.1%)" "Transferring other groups (96.9%) 23S rRNA pseudouridine(2605) synthase (3.1%)" "GO:0000455 (32%) GO:0001522 (1%) GO:0006364 (1%)" "GO:0003723 (33%) GO:0120159 (32%) GO:0009982 (1%)" "enzyme-directed rRNA pseudouridine synthesis (32%) pseudouridine synthesis (1%) rRNA processing (1%)" "RNA binding (33%) rRNA pseudouridine synthase activity (32%) pseudouridine synthase activity (1%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" EVLISIEDIYNQHPEFEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.4.1.4 (82.4%) 1.4.1.2 (17.6%)" "glutamate dehydrogenase (NADP(+)) (82.4%) glutamate dehydrogenase (17.6%)" GO:0006537 (25.3%) "GO:0005829 (25.3%) GO:0009986 (0.4%)" "GO:0004354 (25.3%) GO:0000166 (22.7%) GO:0004352 (0.8%)" glutamate biosynthetic process (25.3%) "cytosol (25.3%) cell surface (0.4%)" "glutamate dehydrogenase (NADP+) activity (25.3%) nucleotide binding (22.7%) glutamate dehydrogenase (NAD+) activity (0.8%)" "IPR046346 (11.4%) IPR006097 (11.3%) IPR033524 (11.3%)" "Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.4%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.3%) Leu/Phe/Val dehydrogenases active site (11.3%)" EKPWGTNHAVLMGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016740 (100%) transferase activity (100%) IPR029044 (100%) Nucleotide-diphospho-sugar transferases (100%) SVQPHDGAEDGGNSR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" RIDQMEAEAESHSFGK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0009271 (48%) GO:0006355 (0.4%) GO:0009408 (0.4%)" "GO:0005829 (48%) GO:0005886 (1.2%) GO:0005667 (0.4%)" "GO:0005543 (0.4%) GO:0042802 (0.4%)" "phage shock (48%) regulation of DNA-templated transcription (0.4%) response to heat (0.4%)" "cytosol (48%) plasma membrane (1.2%) transcription regulator complex (0.4%)" "phospholipid binding (0.4%) identical protein binding (0.4%)" "IPR007157 (51.6%) IPR014319 (48.4%)" "PspA/VIPP1 (51.6%) Phage shock protein, PspA (48.4%)" ASGHVDAFNDPLIDNKDSK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.7%) GO:0015966 (12.2%) GO:0044281 (0.3%)" "GO:0005737 (12.7%) GO:0070062 (12.2%) GO:1990742 (12.2%)" "GO:0004820 (12.7%) GO:0005524 (12.6%) GO:0004081 (12.2%)" "glycyl-tRNA aminoacylation (12.7%) diadenosine tetraphosphate biosynthetic process (12.2%) small molecule metabolic process (0.3%)" "cytoplasm (12.7%) extracellular exosome (12.2%) microvesicle (12.2%)" "glycine-tRNA ligase activity (12.7%) ATP binding (12.6%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.2%)" "IPR027031 (11.3%) IPR045864 (11.2%) IPR002314 (11.1%)" "Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 (11.3%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.2%) Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%)" IMIDPELAGVEIEHKVEEAPVTTKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" IAGFADKATGSASFNQTLSEKR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006811 (21.9%) "GO:0009279 (23.3%) GO:0046930 (21.9%) GO:0016020 (11%)" GO:0015288 (21.9%) monoatomic ion transport (21.9%) "cell outer membrane (23.3%) pore complex (21.9%) membrane (11%)" porin activity (21.9%) "IPR006665 (18.1%) IPR050330 (18.1%) IPR027385 (17.4%)" "OmpA-like domain (18.1%) Bacterial Outer Membrane Structural/Functional (18.1%) Outer membrane protein, beta-barrel domain (17.4%)" SNIVGKPMATLMMQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.5.1.5 (50%) 3.5.4.9 (50%)" "methylenetetrahydrofolate dehydrogenase (NADP(+)) (50%) methenyltetrahydrofolate cyclohydrolase (50%)" "GO:0035999 (15.2%) GO:0000105 (13.1%) GO:0006164 (13.1%)" GO:0005829 (15.2%) "GO:0004477 (15.2%) GO:0004488 (15.2%)" "tetrahydrofolate interconversion (15.2%) L-histidine biosynthetic process (13.1%) purine nucleotide biosynthetic process (13.1%)" cytosol (15.2%) "methenyltetrahydrofolate cyclohydrolase activity (15.2%) methylenetetrahydrofolate dehydrogenase (NADP+) activity (15.2%)" "IPR000672 (16.7%) IPR020630 (16.7%) IPR020631 (16.7%)" "Tetrahydrofolate dehydrogenase/cyclohydrolase (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (16.7%)" RLVDVSHDVIINEEDCGTLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) GO:0000428 (17%) "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (15.2%)" DNA-templated transcription (16.9%) DNA-directed RNA polymerase complex (17%) "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (15.2%)" "IPR007081 (9.2%) IPR045867 (9.2%) IPR007083 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.2%) DNA-directed RNA polymerase, subunit beta-prime (9.2%) RNA polymerase Rpb1, domain 4 (9.1%)" PAGLFASTMGK Coriobacteriales Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales 2.7.11.- (100%) Protein-serine/threonine kinases (100%) GO:0009401 (47.2%) GO:0005737 (47.2%) GO:0016740 (5.6%) phosphoenolpyruvate-dependent sugar phosphotransferase system (47.2%) cytoplasm (47.2%) transferase activity (5.6%) "IPR000032 (33.3%) IPR035895 (33.3%) IPR050399 (33.3%)" "Phosphocarrier protein HPr-like (33.3%) HPr-like superfamily (33.3%) Phosphocarrier protein HPr (33.3%)" KNTSYEIFYAALETVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.7%) "GO:0015935 (20.7%) GO:0005840 (0.2%)" "GO:0003735 (20.7%) GO:0019843 (20.7%) GO:0000049 (16.9%)" translation (20.7%) "small ribosomal subunit (20.7%) ribosome (0.2%)" "structural constituent of ribosome (20.7%) rRNA binding (20.7%) tRNA binding (16.9%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" YFDELMNTHDLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (63.9%) IPR019734 (36.1%)" "Tetratricopeptide-like helical domain superfamily (63.9%) Tetratricopeptide repeat (36.1%)" AKQTAIEQDGVIVEALSNAMFR VGDDVPTVQNPEYFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (17.6%) GO:0006164 (3.7%)" GO:0005737 (21.3%) "GO:0004642 (21.3%) GO:0005524 (18.1%) GO:0046872 (18.1%)" "'de novo' IMP biosynthetic process (17.6%) purine nucleotide biosynthetic process (3.7%)" cytoplasm (21.3%) "phosphoribosylformylglycinamidine synthase activity (21.3%) ATP binding (18.1%) metal ion binding (18.1%)" "IPR010918 (12%) IPR036676 (12%) IPR029062 (11.7%)" "PurM-like, C-terminal domain (12%) PurM-like, C-terminal domain superfamily (12%) Class I glutamine amidotransferase-like (11.7%)" HISPEWIEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) GO:0042777 (23.6%) "GO:0005524 (23.6%) GO:0046933 (23.6%) GO:0046961 (23.6%)" proton motive force-driven plasma membrane ATP synthesis (23.6%) "ATP binding (23.6%) proton-transporting ATP synthase activity, rotational mechanism (23.6%) proton-transporting ATPase activity, rotational mechanism (23.6%)" "IPR000194 (14.3%) IPR004100 (14.3%) IPR020003 (14.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (14.3%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (14.3%)" KGDTVYVNSGEDKGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (19.9%) "GO:0005840 (20.3%) GO:1990904 (19.9%)" "GO:0003735 (19.9%) GO:0019843 (19.9%)" translation (19.9%) "ribosome (20.3%) ribonucleoprotein complex (19.9%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%)" "IPR003256 (16.7%) IPR005824 (16.7%) IPR008991 (16.7%)" "Large ribosomal subunit protein uL24 (16.7%) KOW (16.7%) Translation protein SH3-like domain superfamily (16.7%)" THDKAVAPTMAICPNCGAWHIYHTVCGECGYYR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (33.3%) GO:0015934 (33.3%) GO:0003735 (33.3%) translation (33.3%) large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR002677 (33.3%) IPR011332 (33.3%) IPR044957 (33.3%)" "Large ribosomal subunit protein bL32 (33.3%) Zinc-binding ribosomal protein (33.3%) Large ribosomal subunit protein bL32, bacteria (33.3%)" NRETIYADYIFK Bacteria Bacteria 3.5.3.6 (100%) arginine deiminase (100%) GO:0019546 (33.9%) GO:0005737 (32.1%) GO:0016990 (33.9%) L-arginine deiminase pathway (33.9%) cytoplasm (32.1%) arginine deiminase activity (33.9%) IPR003876 (100%) Arginine deiminase (100%) WNDRVYLSYTGYPGGQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (19.9%) GO:0017148 (19.9%)" "GO:0022625 (19.9%) GO:0005840 (0.4%)" "GO:0003729 (19.9%) GO:0003735 (19.9%)" "translation (19.9%) negative regulation of translation (19.9%)" "cytosolic large ribosomal subunit (19.9%) ribosome (0.4%)" "mRNA binding (19.9%) structural constituent of ribosome (19.9%)" "IPR005822 (25.5%) IPR005823 (25.5%) IPR036899 (25.5%)" "Large ribosomal subunit protein uL13 (25.5%) Large ribosomal subunit protein uL13, bacteria (25.5%) Large ribosomal subunit protein uL13 superfamily (25.5%)" VESVKPEQEVEKTEEKDDNLFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.3%) IPR000795 (8.3%) IPR004161 (8.3%)" "Translation initiation factor IF-2, bacterial-like (8.3%) Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" ELGFDSYEFPQTPSLIIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016020 (100%) membrane (100%) "IPR006665 (17.3%) IPR011990 (17.3%) IPR019734 (17.3%)" "OmpA-like domain (17.3%) Tetratricopeptide-like helical domain superfamily (17.3%) Tetratricopeptide repeat (17.3%)" AGIPTEHFQGYTTLNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.51 (100%) alpha-L-fucosidase (100%) "GO:0006004 (25%) GO:0016139 (25%)" GO:0005764 (25%) GO:0004560 (25%) "fucose metabolic process (25%) glycoside catabolic process (25%)" lysosome (25%) alpha-L-fucosidase activity (25%) "IPR000933 (33.3%) IPR016286 (33.3%) IPR017853 (33.3%)" "Glycoside hydrolase, family 29 (33.3%) Alpha-L-fucosidase, metazoa-type (33.3%) Glycoside hydrolase superfamily (33.3%)" MGKGEYDFSEMYIVHQTYLDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006508 (20%) GO:0009636 (20%) GO:0043418 (20%)" GO:0005737 (20%) GO:0070005 (20%) "proteolysis (20%) response to toxic substance (20%) homocysteine catabolic process (20%)" cytoplasm (20%) cysteine-type aminopeptidase activity (20%) "IPR000169 (33.3%) IPR004134 (33.3%) IPR038765 (33.3%)" "Cysteine peptidase, cysteine active site (33.3%) Peptidase C1B, bleomycin hydrolase (33.3%) Papain-like cysteine peptidase superfamily (33.3%)" YNTLGGVCLNVGCIPSK root 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) "GO:0006103 (20.7%) GO:0006979 (19.2%) GO:0006090 (0.1%)" "GO:0005737 (18%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0004148 (20.7%) GO:0050660 (20.7%) GO:0016491 (0.2%)" "2-oxoglutarate metabolic process (20.7%) response to oxidative stress (19.2%) pyruvate metabolic process (0.1%)" "cytoplasm (18%) cytosol (0%) plasma membrane (0%)" "dihydrolipoyl dehydrogenase (NADH) activity (20.7%) flavin adenine dinucleotide binding (20.7%) oxidoreductase activity (0.2%)" "IPR012999 (12.8%) IPR023753 (12.8%) IPR036188 (12.8%)" "Pyridine nucleotide-disulphide oxidoreductase, class I, active site (12.8%) FAD/NAD(P)-binding domain (12.8%) FAD/NAD(P)-binding domain superfamily (12.8%)" NIQDELGAGQEDEIDELRQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.21.53 (100%) endopeptidase La (100%) "GO:0006515 (12.4%) GO:0034605 (12.4%)" GO:0005737 (12.4%) "GO:0004176 (12.4%) GO:0004252 (12.4%) GO:0005524 (12.4%)" "protein quality control for misfolded or incompletely synthesized proteins (12.4%) cellular response to heat (12.4%)" cytoplasm (12.4%) "ATP-dependent peptidase activity (12.4%) serine-type endopeptidase activity (12.4%) ATP binding (12.4%)" "IPR003111 (7.1%) IPR003593 (7.1%) IPR003959 (7.1%)" "Lon protease, N-terminal domain (7.1%) AAA+ ATPase domain (7.1%) ATPase, AAA-type, core (7.1%)" NLLDKIDQLIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.1.3.11 (100%) fructose-bisphosphatase (100%) GO:0006094 (50%) GO:0042132 (50%) gluconeogenesis (50%) fructose 1,6-bisphosphate 1-phosphatase activity (50%) "IPR009164 (50%) IPR029052 (50%)" "Fructose-1,6-bisphosphatase class 3 (50%) Metallo-dependent phosphatase-like (50%)" AMQDAGLSNSDIDEVILVGGSSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005524 (33.3%) GO:0051082 (33.3%) GO:0140662 (33.3%)" "ATP binding (33.3%) unfolded protein binding (33.3%) ATP-dependent protein folding chaperone (33.3%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" NQAQYIANILDHDITFGVGPAGTGK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria GO:0005829 (47.9%) "GO:0005524 (47.9%) GO:0016787 (4.2%)" cytosol (47.9%) "ATP binding (47.9%) hydrolase activity (4.2%)" "IPR003714 (33.4%) IPR051451 (33.4%) IPR027417 (33.3%)" "PhoH-like protein (33.4%) PhoH2-like (33.4%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" YHEAFNKFEPALPDTQTTEAVNALLEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (25%) GO:0016052 (25%)" GO:0005737 (25%) GO:0004139 (25%) "deoxyribonucleotide catabolic process (25%) carbohydrate catabolic process (25%)" cytoplasm (25%) deoxyribose-phosphate aldolase activity (25%) "IPR002915 (33.3%) IPR011343 (33.3%) IPR013785 (33.3%)" "DeoC/FbaB/LacD aldolase (33.3%) Deoxyribose-phosphate aldolase (33.3%) Aldolase-type TIM barrel (33.3%)" TLLGADDKGGVAAIVASMQYLKDHPEIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.11.4 (100%) tripeptide aminopeptidase (100%) "GO:0006508 (16.7%) GO:0043171 (16.7%)" GO:0005829 (16.7%) "GO:0008237 (16.7%) GO:0008270 (16.7%) GO:0045148 (16.7%)" "proteolysis (16.7%) peptide catabolic process (16.7%)" cytosol (16.7%) "metallopeptidase activity (16.7%) zinc ion binding (16.7%) tripeptide aminopeptidase activity (16.7%)" "IPR001261 (20%) IPR002933 (20%) IPR010161 (20%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%) Peptidase M20 (20%) Peptidase M20B, tripeptide aminopeptidase (20%)" DMAGVGRPAMLGQLTK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.1.3.1 (100%) methylmalonyl-CoA carboxytransferase (100%) GO:0006094 (5%) GO:0005737 (5%) "GO:0003824 (75%) GO:0047154 (10%) GO:0004736 (5%)" gluconeogenesis (5%) cytoplasm (5%) "catalytic activity (75%) methylmalonyl-CoA carboxytransferase activity (10%) pyruvate carboxylase activity (5%)" "IPR000891 (25%) IPR003379 (25%) IPR013785 (25%)" "Pyruvate carboxyltransferase (25%) Carboxylase, conserved domain (25%) Aldolase-type TIM barrel (25%)" ELDKVAEEFIRDHGAVPTFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.11.18 (100%) methionyl aminopeptidase (100%) GO:0006508 (20.1%) GO:0005829 (20.1%) "GO:0004239 (20.1%) GO:0070006 (20.1%) GO:0046914 (19.5%)" proteolysis (20.1%) cytosol (20.1%) "initiator methionyl aminopeptidase activity (20.1%) metalloaminopeptidase activity (20.1%) transition metal ion binding (19.5%)" "IPR000994 (25%) IPR001714 (25%) IPR002467 (25%)" "Peptidase M24 (25%) Peptidase M24, methionine aminopeptidase (25%) Peptidase M24A, methionine aminopeptidase, subfamily 1 (25%)" SEEIFAEVIKNSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" AKGYDLVIVDTAGR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) "GO:0048500 (19.4%) GO:0005786 (0.5%)" "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (19.8%)" SRP-dependent cotranslational protein targeting to membrane (20%) "signal recognition particle (19.4%) signal recognition particle, endoplasmic reticulum targeting (0.5%)" "GTPase activity (20%) GTP binding (20%) 7S RNA binding (19.8%)" "IPR000897 (11.2%) IPR022941 (11.2%) IPR027417 (11.2%)" "Signal recognition particle, SRP54 subunit, GTPase domain (11.2%) Signal recognition particle, SRP54 subunit (11.2%) P-loop containing nucleoside triphosphate hydrolase (11.2%)" ALCEITGFDFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.3%) IPR008948 (14.3%) IPR018951 (14.3%)" "Fumarate lyase family (14.3%) L-Aspartase-like (14.3%) Fumarase C, C-terminal (14.3%)" LSEAMKDCTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.3.1 (100%) citrate (Si)-synthase (100%) "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (25%) "GO:0036440 (21.7%) GO:0046912 (3.3%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (25%) "citrate synthase activity (21.7%) acyltransferase activity, acyl groups converted into alkyl on transfer (3.3%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" AVVVTSGTTSEVLLNKLNEEQKMNMR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006865 (32.5%) GO:0015813 (0.3%) GO:0070778 (0.3%)" "GO:0005576 (32.5%) GO:0030288 (32.5%) GO:0016020 (0.3%)" "GO:0016595 (0.3%) GO:0070335 (0.3%)" "amino acid transport (32.5%) L-glutamate transmembrane transport (0.3%) L-aspartate transmembrane transport (0.3%)" "extracellular region (32.5%) outer membrane-bounded periplasmic space (32.5%) membrane (0.3%)" "glutamate binding (0.3%) aspartate binding (0.3%)" "IPR001638 (50%) IPR051455 (50%)" "Solute-binding protein family 3/N-terminal domain of MltF (50%) Bacterial solute-binding protein 3 (50%)" EVANVNDAENKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" DGNVTDVDFEEVK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae "GO:0005737 (17.5%) GO:0070013 (6.3%)" "GO:0005524 (25.4%) GO:0051082 (25.4%) GO:0140662 (25.4%)" "cytoplasm (17.5%) intracellular organelle lumen (6.3%)" "ATP binding (25.4%) unfolded protein binding (25.4%) ATP-dependent protein folding chaperone (25.4%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" AHLSTFDQENPLLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (12.5%) IPR004739 (12.5%) IPR014729 (12.5%)" "GMP synthase, C-terminal (12.5%) GMP synthase, glutamine amidotransferase (12.5%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" MKAEAEANAEADKKER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0042026 (0.2%) GO:0051085 (0.2%)" "GO:0005524 (33.1%) GO:0140662 (33.1%) GO:0051082 (32.7%)" "protein refolding (0.2%) obsolete chaperone cofactor-dependent protein refolding (0.2%)" "ATP binding (33.1%) ATP-dependent protein folding chaperone (33.1%) unfolded protein binding (32.7%)" "IPR013126 (16.8%) IPR029047 (16.8%) IPR029048 (16.8%)" "Heat shock protein 70 family (16.8%) Heat shock protein 70kD, peptide-binding domain superfamily (16.8%) Heat shock protein 70kD, C-terminal domain superfamily (16.8%)" IIAVEPAESPVLSGGAPGPHK Spumella elongata Eukaryota Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella elongata 2.5.1.47 (100%) cysteine synthase (100%) GO:0006535 (33.3%) GO:0005737 (33.3%) GO:0004124 (33.3%) cysteine biosynthetic process from serine (33.3%) cytoplasm (33.3%) cysteine synthase activity (33.3%) "IPR001216 (16.7%) IPR001926 (16.7%) IPR005856 (16.7%)" "Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site (16.7%) Tryptophan synthase beta chain-like, PALP domain (16.7%) Cysteine synthase (16.7%)" CPPEDQSVANLSGGER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.6.1.- (100%) In phosphorus-containing anhydrides (100%) "GO:0006412 (12.6%) GO:0045900 (12.6%)" GO:0005737 (12.6%) "GO:0000049 (12.6%) GO:0005524 (12.6%) GO:0016887 (12.6%)" "translation (12.6%) negative regulation of translational elongation (12.6%)" cytoplasm (12.6%) "tRNA binding (12.6%) ATP binding (12.6%) ATP hydrolysis activity (12.6%)" "IPR003439 (16.7%) IPR003593 (16.7%) IPR017871 (16.7%)" "ABC transporter-like, ATP-binding domain (16.7%) AAA+ ATPase domain (16.7%) ABC transporter-like, conserved site (16.7%)" DYSNIDNAPEEKER Campylobacter hominis ATCC BAA-381 Bacteria Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter hominis Campylobacter hominis ATCC BAA-381 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytosol (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" ALDEVLPVAFSIVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (10.8%) GO:0004386 (0.3%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (10.8%) helicase activity (0.3%)" "IPR000185 (7.8%) IPR011115 (7.8%) IPR014001 (7.8%)" "Protein translocase subunit SecA (7.8%) SecA DEAD-like, N-terminal (7.8%) Helicase superfamily 1/2, ATP-binding domain (7.8%)" HTNIKPQVDKYTFPNGNSIFLLAEGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.13.2.1 (100%) adenosylhomocysteinase (100%) "GO:0006730 (20%) GO:0033353 (20%) GO:0071269 (20%)" GO:0005829 (20%) GO:0004013 (20%) "one-carbon metabolic process (20%) S-adenosylmethionine cycle (20%) L-homocysteine biosynthetic process (20%)" cytosol (20%) adenosylhomocysteinase activity (20%) "IPR000043 (20%) IPR015878 (20%) IPR020082 (20%)" "Adenosylhomocysteinase-like (20%) S-adenosyl-L-homocysteine hydrolase, NAD binding domain (20%) S-adenosyl-L-homocysteine hydrolase, conserved site (20%)" IEPVMHIIDIAFK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.11.4 (100%) tripeptide aminopeptidase (100%) "GO:0006508 (16.7%) GO:0043171 (15.7%) GO:0006518 (0.9%)" GO:0005829 (16.7%) "GO:0008237 (16.7%) GO:0008270 (16.7%) GO:0045148 (16.7%)" "proteolysis (16.7%) peptide catabolic process (15.7%) peptide metabolic process (0.9%)" cytosol (16.7%) "metallopeptidase activity (16.7%) zinc ion binding (16.7%) tripeptide aminopeptidase activity (16.7%)" "IPR001261 (20%) IPR002933 (20%) IPR010161 (20%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%) Peptidase M20 (20%) Peptidase M20B, tripeptide aminopeptidase (20%)" ATGSIIESSLDKGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006413 (0.1%) GO:0005737 (25%) "GO:0003743 (25.1%) GO:0005525 (25%) GO:0003924 (24.9%)" translational initiation (0.1%) cytoplasm (25%) "translation initiation factor activity (25.1%) GTP binding (25%) GTPase activity (24.9%)" "IPR009000 (9.1%) IPR015760 (9.1%) IPR044145 (9.1%)" "Translation protein, beta-barrel domain superfamily (9.1%) Translation initiation factor IF- 2 (9.1%) Translation initiation factor IF-2, domain II (9.1%)" AGFMESNPYKDFAPGDYTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004822 (14.3%)" isoleucyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) isoleucine-tRNA ligase activity (14.3%)" "IPR002300 (12.5%) IPR002301 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class Ia (12.5%) Isoleucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" VINLDKESEPDIFNAIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.3%) GO:0005829 (17.3%) "GO:0004612 (17.3%) GO:0005524 (17.3%) GO:0046872 (17.3%)" gluconeogenesis (17.3%) cytosol (17.3%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.3%) ATP binding (17.3%) metal ion binding (17.3%)" "IPR001272 (25.4%) IPR008210 (25.4%) IPR013035 (25.4%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.4%) Phosphoenolpyruvate carboxykinase, N-terminal (25.4%) Phosphoenolpyruvate carboxykinase, C-terminal (25.4%)" ALLESEQDPEMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0016149 (50%) cytoplasm (50%) translation release factor activity, codon specific (50%) "IPR000352 (20%) IPR004373 (20%) IPR005139 (20%)" "Peptide chain release factor class I (20%) Peptide chain release factor 1 (20%) Peptide chain release factor (20%)" IVIAYEPVWAIGTGK root "5.3.1.1 (99.6%) 2.7.2.3 (0.2%) 2.7.7.9 (0.1%)" "triose-phosphate isomerase (99.6%) phosphoglycerate kinase (0.2%) UTP--glucose-1-phosphate uridylyltransferase (0.1%)" "GO:0006096 (16.4%) GO:0006094 (16.3%) GO:0019563 (16.1%)" "GO:0005829 (16.1%) GO:0020015 (0.3%) GO:0016020 (0.2%)" "GO:0004807 (16.7%) GO:0003755 (0.2%) GO:0005524 (0.1%)" "glycolytic process (16.4%) gluconeogenesis (16.3%) glycerol catabolic process (16.1%)" "cytosol (16.1%) glycosome (0.3%) membrane (0.2%)" "triose-phosphate isomerase activity (16.7%) peptidyl-prolyl cis-trans isomerase activity (0.2%) ATP binding (0.1%)" "IPR000652 (20%) IPR020861 (20%) IPR013785 (20%)" "Triosephosphate isomerase (20%) Triosephosphate isomerase, active site (20%) Aldolase-type TIM barrel (20%)" KILKVDPFQVLDQNGVGQLVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.7.9.1 (99.4%) 2.7.-.- (0.6%)" "pyruvate, phosphate dikinase (99.4%) Transferring phosphorus-containing groups (0.6%)" "GO:0050242 (25.3%) GO:0016301 (25.2%) GO:0046872 (24.7%)" "pyruvate, phosphate dikinase activity (25.3%) kinase activity (25.2%) metal ion binding (24.7%)" "IPR000121 (10.1%) IPR010121 (10.1%) IPR015813 (10.1%)" "PEP-utilising enzyme, C-terminal (10.1%) Pyruvate, phosphate dikinase (10.1%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (10.1%)" GLVHFSYGMVELPEGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.19 (100%) arginine--tRNA ligase (100%) GO:0006420 (25%) GO:0005737 (24.6%) "GO:0004814 (25%) GO:0005524 (25%) GO:0016874 (0.5%)" arginyl-tRNA aminoacylation (25%) cytoplasm (24.6%) "arginine-tRNA ligase activity (25%) ATP binding (25%) ligase activity (0.5%)" "IPR001278 (12.7%) IPR035684 (12.7%) IPR014729 (12.6%)" "Arginine-tRNA ligase (12.7%) Arginyl-tRNA synthetase, catalytic core domain (12.7%) Rossmann-like alpha/beta/alpha sandwich fold (12.6%)" TYDPLEVTLDEAIELILAKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.6.2.1 (95.7%) 5.99.1.2 (4.3%)" "DNA topoisomerase (95.7%) Transferred entry: 5.6.2.1 (4.3%)" GO:0006265 (25%) "GO:0003677 (25%) GO:0003917 (25%) GO:0046872 (25%)" DNA topological change (25%) "DNA binding (25%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25%) metal ion binding (25%)" "IPR000380 (7.1%) IPR003601 (7.1%) IPR003602 (7.1%)" "DNA topoisomerase, type IA (7.1%) DNA topoisomerase, type IA, domain 2 (7.1%) DNA topoisomerase, type IA, DNA-binding domain (7.1%)" VNFDQLLEAGVHFGHLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" QDDNVQDADFEEVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0005524 (33.3%) GO:0051082 (33.3%) GO:0140662 (33.3%)" "ATP binding (33.3%) unfolded protein binding (33.3%) ATP-dependent protein folding chaperone (33.3%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" TLADEILPQLRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR011990 (50.7%) IPR019734 (47.9%) IPR013105 (0.5%)" "Tetratricopeptide-like helical domain superfamily (50.7%) Tetratricopeptide repeat (47.9%) Tetratricopeptide repeat 2 (0.5%)" VGLYTSPHIVDFR root "6.3.2.17 (51.5%) 6.3.2.12 (47.1%) 6.3.2.- (1.3%)" "tetrahydrofolate synthase (51.5%) dihydrofolate synthase (47.1%) Acid--amino-acid ligases (peptide synthases) (1.3%)" GO:0046656 (15.4%) "GO:0005737 (16.9%) GO:0016020 (0.1%)" "GO:0004326 (16.9%) GO:0005524 (16.9%) GO:0008841 (16.9%)" folic acid biosynthetic process (15.4%) "cytoplasm (16.9%) membrane (0.1%)" "tetrahydrofolylpolyglutamate synthase activity (16.9%) ATP binding (16.9%) dihydrofolate synthase activity (16.9%)" "IPR001645 (16.9%) IPR036565 (16.9%) IPR013221 (16.8%)" "Folylpolyglutamate synthetase (16.9%) Mur-like, catalytic domain superfamily (16.9%) Mur ligase, central (16.8%)" ADIDYALAEALTK Bacteria Bacteria GO:0006412 (20.1%) GO:0022627 (20.1%) "GO:0003735 (20.1%) GO:0019843 (19.8%) GO:0003729 (19.4%)" translation (20.1%) cytosolic small ribosomal subunit (20.1%) "structural constituent of ribosome (20.1%) rRNA binding (19.8%) mRNA binding (19.4%)" "IPR001351 (11.3%) IPR005704 (11.3%) IPR009019 (11.3%)" "Small ribosomal subunit protein uS3, C-terminal (11.3%) Small ribosomal subunit protein uS3, bacteria (11.3%) K homology domain superfamily, prokaryotic type (11.3%)" TTANADPILYQIGEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (16.7%) "GO:0000287 (16.7%) GO:0004743 (16.7%) GO:0005524 (16.7%)" response to stress (16.7%) "magnesium ion binding (16.7%) pyruvate kinase activity (16.7%) ATP binding (16.7%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" IAIVNMGSLFQQVAQK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0050821 (24%) GO:0061077 (1.4%) GO:0006457 (0.2%)" "GO:0005829 (24%) GO:0042597 (23.6%) GO:0030288 (0.2%)" "GO:0051082 (24%) GO:0003677 (1.6%) GO:0001530 (0.2%)" "protein stabilization (24%) obsolete chaperone-mediated protein folding (1.4%) protein folding (0.2%)" "cytosol (24%) periplasmic space (23.6%) outer membrane-bounded periplasmic space (0.2%)" "unfolded protein binding (24%) DNA binding (1.6%) lipopolysaccharide binding (0.2%)" "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" MDKLIDDLIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.2.19 (100%) nicotinate-nucleotide diphosphorylase (carboxylating) (100%) "GO:0009435 (25%) GO:0034213 (25%)" GO:0005737 (25%) GO:0004514 (25%) "NAD+ biosynthetic process (25%) quinolinate catabolic process (25%)" cytoplasm (25%) nicotinate-nucleotide diphosphorylase (carboxylating) activity (25%) "IPR002638 (14.3%) IPR004393 (14.3%) IPR013785 (14.3%)" "Quinolinate phosphoribosyl transferase, C-terminal (14.3%) Nicotinate-nucleotide pyrophosphorylase (14.3%) Aldolase-type TIM barrel (14.3%)" GGTPYGATTIAGGDGSR root 1.6.5.2 (100%) NAD(P)H dehydrogenase (quinone) (100%) GO:0006979 (0%) "GO:0016020 (16.1%) GO:0005829 (0%) GO:0032991 (0%)" "GO:0010181 (16.1%) GO:0050660 (15.5%) GO:0050661 (15.5%)" response to oxidative stress (0%) "membrane (16.1%) cytosol (0%) protein-containing complex (0%)" "FMN binding (16.1%) flavin adenine dinucleotide binding (15.5%) NADP binding (15.5%)" "IPR029039 (20.3%) IPR010089 (20.2%) IPR008254 (20%)" "Flavoprotein-like superfamily (20.3%) Flavoprotein WrbA-like (20.2%) Flavodoxin/nitric oxide synthase (20%)" GLIDSSDLPLNVSR root "GO:0006457 (0.1%) GO:0006974 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (18.8%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0005524 (19.9%) GO:0016887 (19.9%) GO:0051082 (19.9%)" "protein folding (0.1%) DNA damage response (0.1%) response to heat (0.1%)" "cytoplasm (18.8%) cytosol (0.1%) plasma membrane (0.1%)" "ATP binding (19.9%) ATP hydrolysis activity (19.9%) unfolded protein binding (19.9%)" "IPR001404 (15.4%) IPR020568 (15.4%) IPR020575 (14.3%)" "Heat shock protein Hsp90 family (15.4%) Ribosomal protein uS5 domain 2-type superfamily (15.4%) Heat shock protein Hsp90, N-terminal (14.3%)" VMDMPEGIAGIPQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.1.- (100%) Transaminases (100%) GO:0006520 (27.8%) "GO:0030170 (27.8%) GO:0008483 (26.6%) GO:0016829 (16.5%)" amino acid metabolic process (27.8%) "pyridoxal phosphate binding (27.8%) transaminase activity (26.6%) lyase activity (16.5%)" "IPR004838 (14.4%) IPR004839 (14.4%) IPR015421 (14.4%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (14.4%) Aminotransferase, class I/classII, large domain (14.4%) Pyridoxal phosphate-dependent transferase, major domain (14.4%)" EAGASGFITKPINLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0000160 (100%) phosphorelay signal transduction system (100%) "IPR001789 (33.3%) IPR011006 (33.3%) IPR050595 (33.3%)" "Signal transduction response regulator, receiver domain (33.3%) CheY-like superfamily (33.3%) Bacterial response regulator (33.3%)" IVDIASEEKDKATQDFLWGFVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.3%) GO:0006879 (14.3%)" GO:0005829 (14.3%) "GO:0004322 (14.3%) GO:0008198 (14.3%) GO:0008199 (14.3%)" "iron ion transport (14.3%) intracellular iron ion homeostasis (14.3%)" cytosol (14.3%) "ferroxidase activity (14.3%) ferrous iron binding (14.3%) ferric iron binding (14.3%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" GGLSFNLGDIIIPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) GO:0000428 (17%) "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (15.4%)" DNA-templated transcription (17%) DNA-directed RNA polymerase complex (17%) "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (15.4%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" ALEHVENLELQNMLRDEADQMSCVLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005737 (50%) GO:0016149 (50%) cytoplasm (50%) translation release factor activity, codon specific (50%) "IPR000352 (25%) IPR004374 (25%) IPR005139 (25%)" "Peptide chain release factor class I (25%) Peptide chain release factor 2 (25%) Peptide chain release factor (25%)" SGSIINMASVVGVHGNAGQANYSASK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) GO:0006633 (33.3%) "GO:0004316 (33.3%) GO:0051287 (33.3%)" fatty acid biosynthetic process (33.3%) "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33.3%) NAD binding (33.3%)" "IPR002347 (16.7%) IPR011284 (16.7%) IPR020904 (16.7%)" "Short-chain dehydrogenase/reductase SDR (16.7%) 3-oxoacyl-(acyl-carrier-protein) reductase (16.7%) Short-chain dehydrogenase/reductase, conserved site (16.7%)" YCVIKLPSGEVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0002181 (19.9%) "GO:0015934 (19.9%) GO:0005840 (0.2%)" "GO:0003735 (19.9%) GO:0016740 (19.9%) GO:0019843 (18.5%)" cytoplasmic translation (19.9%) "large ribosomal subunit (19.9%) ribosome (0.2%)" "structural constituent of ribosome (19.9%) transferase activity (19.9%) rRNA binding (18.5%)" "IPR002171 (11.1%) IPR005880 (11.1%) IPR008991 (11.1%)" "Large ribosomal subunit protein uL2 (11.1%) Large ribosomal subunit protein uL2, bacteria/organella (11.1%) Translation protein SH3-like domain superfamily (11.1%)" DAIPTQSVLTITSNVVYGKK Bacteria Bacteria 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (29.3%) GO:0044814 (0.2%)" "GO:0005829 (32.6%) GO:0016020 (0.2%)" "GO:0008861 (32.6%) GO:0016829 (4.3%) GO:0016746 (0.6%)" "glucose metabolic process (29.3%) pyruvate fermentation via PFL (0.2%)" "cytosol (32.6%) membrane (0.2%)" "formate C-acetyltransferase activity (32.6%) lyase activity (4.3%) acyltransferase activity (0.6%)" "IPR004184 (20.7%) IPR050244 (20.7%) IPR001150 (20.1%)" "Pyruvate formate lyase domain (20.7%) Autonomous Glycyl Radical Cofactor (20.7%) Glycine radical domain (20.1%)" NSALTSTGLVPFMER Pseudomonadati Bacteria Pseudomonadati 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (19.9%) GO:0009263 (17.9%)" "GO:0004748 (20.7%) GO:0031419 (20.7%) GO:0005524 (17.9%)" "DNA biosynthetic process (19.9%) deoxyribonucleotide biosynthetic process (17.9%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.7%) cobalamin binding (20.7%) ATP binding (17.9%)" "IPR000788 (26%) IPR050862 (26%) IPR013344 (25.6%)" "Ribonucleotide reductase large subunit, C-terminal (26%) Ribonucleoside diphosphate reductase class-2 (26%) Ribonucleotide reductase, adenosylcobalamin-dependent (25.6%)" TFGMEGLFR root "1.2.4.1 (99.9%) 1.-.-.- (0%) 1.2.1.- (0%)" "pyruvate dehydrogenase (acetyl-transferring) (99.9%) Oxidoreductases (0%) With NAD(+) or NADP(+) as acceptor (0%)" "GO:0006086 (0%) GO:0042867 (0%)" "GO:0045254 (0%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0004739 (39.4%) GO:0000287 (34.7%) GO:0046872 (14.5%)" "pyruvate decarboxylation to acetyl-CoA (0%) pyruvate catabolic process (0%)" "pyruvate dehydrogenase complex (0%) cytosol (0%) membrane (0%)" "pyruvate dehydrogenase (acetyl-transferring) activity (39.4%) magnesium ion binding (34.7%) metal ion binding (14.5%)" "IPR041621 (12.5%) IPR051157 (12.5%) IPR029061 (12.5%)" "Pyruvate dehydrogenase E1 component, middle domain (12.5%) Pyruvate Dehydrogenase/Transketolase (12.5%) Thiamin diphosphate-binding fold (12.5%)" FASYELVPSDVQDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.1%) "GO:0003746 (25.4%) GO:0005525 (25.1%) GO:0003924 (24.4%)" ribosome disassembly (25.1%) "translation elongation factor activity (25.4%) GTP binding (25.1%) GTPase activity (24.4%)" "IPR000640 (7.6%) IPR005517 (7.6%) IPR009000 (7.6%)" "Elongation factor EFG, domain V-like (7.6%) Translation elongation factor EFG/EF2, domain IV (7.6%) Translation protein, beta-barrel domain superfamily (7.6%)" VKEYLEADIKNSDLGEYVSQVLIPTEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006353 (20%) GO:0006354 (20%) GO:0031564 (20%)" GO:0005829 (20%) "DNA-templated transcription termination (20%) DNA-templated transcription elongation (20%) transcription antitermination (20%)" cytosol (20%) "IPR001062 (12.5%) IPR005824 (12.5%) IPR006645 (12.5%)" "Transcription antitermination protein, NusG (12.5%) KOW (12.5%) NusG-like, N-terminal (12.5%)" AEQLINEALTNPETK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" NTGGFDMIGSGR root 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.5%) GO:0006002 (14.3%) GO:0015979 (0.1%)" "GO:0005829 (14.5%) GO:0016020 (0.1%)" "GO:0003872 (14.5%) GO:0046872 (14.3%) GO:0005524 (13.8%)" "response to glucose (14.5%) fructose 6-phosphate metabolic process (14.3%) photosynthesis (0.1%)" "cytosol (14.5%) membrane (0.1%)" "6-phosphofructokinase activity (14.5%) metal ion binding (14.3%) ATP binding (13.8%)" "IPR035966 (25.1%) IPR000023 (24.9%) IPR022953 (24.8%)" "Phosphofructokinase superfamily (25.1%) Phosphofructokinase domain (24.9%) ATP-dependent 6-phosphofructokinase (24.8%)" ALIDDLMGVYDKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016740 (100%) transferase activity (100%) "IPR011990 (57.1%) IPR019734 (38.1%) IPR013105 (4.8%)" "Tetratricopeptide-like helical domain superfamily (57.1%) Tetratricopeptide repeat (38.1%) Tetratricopeptide repeat 2 (4.8%)" GAHIYAEIVGYGATSDGADMVAPSGEGAVR root 2.3.1.41 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase I (100%) "GO:0006633 (33.2%) GO:1903966 (0%)" "GO:0005829 (33.1%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0004315 (33.2%) GO:0016746 (0.3%) GO:0022857 (0%)" "fatty acid biosynthetic process (33.2%) monounsaturated fatty acid biosynthetic process (0%)" "cytosol (33.1%) cytoplasm (0.1%) membrane (0%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (33.2%) acyltransferase activity (0.3%) transmembrane transporter activity (0%)" "IPR000794 (16.7%) IPR020841 (16.7%) IPR014031 (16.7%)" "Beta-ketoacyl synthase (16.7%) Polyketide synthase, beta-ketoacyl synthase domain (16.7%) Beta-ketoacyl synthase, C-terminal (16.7%)" GTVEVKDGDNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR025150 (50%) IPR053850 (50%)" "Glycoside hydrolase 123, catalytic domain (50%) Glycoside hydrolase 123, N-terminal domain (50%)" ILMLGGTPANKYSDYLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0008199 (43.8%) GO:0016722 (43.8%) GO:0003677 (12.5%)" "ferric iron binding (43.8%) oxidoreductase activity, acting on metal ions (43.8%) DNA binding (12.5%)" "IPR002177 (20%) IPR008331 (20%) IPR009078 (20%)" "DNA-binding protein Dps (20%) Ferritin/DPS domain (20%) Ferritin-like superfamily (20%)" KIIVCEYCGR Bacteroidota Bacteria Pseudomonadati Bacteroidota "IPR003743 (49.8%) IPR052376 (49.7%) IPR056003 (0.5%)" "C4-type zinc ribbon domain (49.8%) Oxidative Scavengers and Glycosyltransferases (49.7%) CT398-like coiled coil hairpin domain (0.5%)" ITESEFLWQHNQDPMAVDKLAEGIRK root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (24.9%) GO:0006098 (24.2%) GO:0009052 (0.2%)" "GO:0005829 (24.6%) GO:0016020 (0.2%)" "GO:0004801 (25.1%) GO:0016740 (0.7%) GO:0016744 (0.2%)" "carbohydrate metabolic process (24.9%) pentose-phosphate shunt (24.2%) pentose-phosphate shunt, non-oxidative branch (0.2%)" "cytosol (24.6%) membrane (0.2%)" "transaldolase activity (25.1%) transferase activity (0.7%) transketolase or transaldolase activity (0.2%)" "IPR013785 (25.9%) IPR001585 (25.8%) IPR018225 (24.2%)" "Aldolase-type TIM barrel (25.9%) Transaldolase/Fructose-6-phosphate aldolase (25.8%) Transaldolase, active site (24.2%)" MQVSPMDCTGCGNCADICPAK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0006979 (16.7%) GO:0022900 (16.7%)" "GO:0005506 (16.7%) GO:0030976 (16.7%) GO:0051539 (16.7%)" "response to oxidative stress (16.7%) electron transport chain (16.7%)" "iron ion binding (16.7%) thiamine pyrophosphate binding (16.7%) 4 iron, 4 sulfur cluster binding (16.7%)" "IPR002869 (7.9%) IPR009014 (7.9%) IPR011766 (7.9%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.9%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.9%) Thiamine pyrophosphate enzyme, TPP-binding (7.9%)" FRENPLTEIAGSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (23.9%) GO:0006166 (23.9%)" "GO:0000287 (23.9%) GO:0008973 (23.9%) GO:0004614 (4.3%)" "carbohydrate metabolic process (23.9%) purine ribonucleoside salvage (23.9%)" "magnesium ion binding (23.9%) phosphopentomutase activity (23.9%) phosphoglucomutase activity (4.3%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" KIGEYDIIIGGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0009055 (98.4%) GO:0016491 (1.6%)" "electron transfer activity (98.4%) oxidoreductase activity (1.6%)" "IPR000049 (20%) IPR012255 (20%) IPR014729 (20%)" "Electron transfer flavoprotein, beta-subunit, conserved site (20%) Electron transfer flavoprotein, beta subunit (20%) Rossmann-like alpha/beta/alpha sandwich fold (20%)" TVGEQLSNQFAVGLAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20.9%) GO:0000428 (20.9%) "GO:0003677 (20.9%) GO:0003899 (20.9%) GO:0032549 (16.6%)" DNA-templated transcription (20.9%) DNA-directed RNA polymerase complex (20.9%) "DNA binding (20.9%) DNA-directed RNA polymerase activity (20.9%) ribonucleoside binding (16.6%)" "IPR007645 (9.7%) IPR010243 (7.7%) IPR015712 (7.7%)" "RNA polymerase Rpb2, domain 3 (9.7%) DNA-directed RNA polymerase beta subunit, bacterial-type (7.7%) DNA-directed RNA polymerase, subunit 2 (7.7%)" SGTRKEELLTTQEELQK root "3.6.4.- (99.8%) 3.6.1.15 (0.2%)" "Acting on ATP; involved in cellular and subcellular movement (99.8%) nucleoside-triphosphate phosphatase (0.2%)" GO:0006353 (14.4%) "GO:0005829 (13.6%) GO:0016020 (0%)" "GO:0003723 (14.4%) GO:0005524 (14.4%) GO:0008186 (14.4%)" DNA-templated transcription termination (14.4%) "cytosol (13.6%) membrane (0%)" "RNA binding (14.4%) ATP binding (14.4%) ATP-dependent activity, acting on RNA (14.4%)" "IPR004665 (10.3%) IPR027417 (10.3%) IPR000194 (10.2%)" "Transcription termination factor Rho (10.3%) P-loop containing nucleoside triphosphate hydrolase (10.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.2%)" NQGEEIAELHKEVDKLQAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005975 (50%) "GO:0003824 (25%) GO:0016787 (25%)" carbohydrate metabolic process (50%) "catalytic activity (25%) hydrolase activity (25%)" "IPR004300 (33.3%) IPR011330 (33.3%) IPR052046 (33.3%)" "Glycoside hydrolase family 57, N-terminal domain (33.3%) Glycoside hydrolase/deacetylase, beta/alpha-barrel (33.3%) Glycosyl hydrolase family 57 (33.3%)" LVADHLIAANLAGHDSHGIGMIPSYVR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.1.1.- (86.6%) 1.1.1.37 (6%) 1.1.1.27 (4.5%)" "With NAD(+) or NADP(+) as acceptor (86.6%) malate dehydrogenase (6%) L-lactate dehydrogenase (4.5%)" "GO:0005829 (0.6%) GO:0016020 (0.6%)" "GO:0016491 (91.7%) GO:0030060 (3%) GO:0004459 (1.8%)" "cytosol (0.6%) membrane (0.6%)" "oxidoreductase activity (91.7%) L-malate dehydrogenase (NAD+) activity (3%) L-lactate dehydrogenase (NAD+) activity (1.8%)" "IPR003767 (25%) IPR036111 (25%) IPR043144 (25%)" "Malate/L-lactate dehydrogenase-like (25%) Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily (25%) Malate/L-sulfolactate/L-lactate dehydrogenase-like, alpha-helical domain (25%)" EVEIGGPSVNPVR Pseudomonadati Bacteria Pseudomonadati "3.6.3.14 (95.5%) 3.6.3.15 (4.5%)" "Transferred entry: 7.1.2.2 (95.5%) Transferred entry: 7.2.2.1 (4.5%)" "GO:0046034 (29.4%) GO:1902600 (29.4%) GO:0006811 (3.7%)" "GO:0005524 (32.9%) GO:0016787 (4.6%)" "ATP metabolic process (29.4%) proton transmembrane transport (29.4%) monoatomic ion transport (3.7%)" "ATP binding (32.9%) hydrolase activity (4.6%)" "IPR022879 (20.5%) IPR027417 (20.5%) IPR000194 (20.4%)" "V-type ATP synthase regulatory subunit B/beta (20.5%) P-loop containing nucleoside triphosphate hydrolase (20.5%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.4%)" IREHDLISVVGLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" AGVTPYCDLSLNGLTIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.4 (100%) leucine--tRNA ligase (100%) GO:0006429 (20%) GO:0005829 (20%) "GO:0002161 (20%) GO:0004823 (20%) GO:0005524 (20%)" leucyl-tRNA aminoacylation (20%) cytosol (20%) "aminoacyl-tRNA deacylase activity (20%) leucine-tRNA ligase activity (20%) ATP binding (20%)" "IPR001412 (12.5%) IPR002302 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Leucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" VVSWYDNEWGYSNK Bacteria Bacteria "1.2.1.- (91.8%) 1.2.1.12 (8.2%)" "With NAD(+) or NADP(+) as acceptor (91.8%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (8.2%)" "GO:0006006 (19.7%) GO:0006096 (11.2%)" "GO:0005737 (9.5%) GO:0005829 (0.2%)" "GO:0051287 (19.7%) GO:0050661 (19.7%) GO:0004365 (13.4%)" "glucose metabolic process (19.7%) glycolytic process (11.2%)" "cytoplasm (9.5%) cytosol (0.2%)" "NAD binding (19.7%) NADP binding (19.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (13.4%)" "IPR020829 (16.9%) IPR020831 (16.9%) IPR020830 (16.6%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.9%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (16.9%) Glyceraldehyde 3-phosphate dehydrogenase, active site (16.6%)" MQTIDNFNFAGKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" TEAIYADVIK Pseudomonadati Bacteria Pseudomonadati "2.7.2.3 (63.6%) 7.4.2.8 (27.3%) 3.5.1.25 (9.1%)" "phosphoglycerate kinase (63.6%) protein-secreting ATPase (27.3%) N-acetylglucosamine-6-phosphate deacetylase (9.1%)" "GO:0006094 (9.7%) GO:0006096 (9.7%) GO:0006605 (4.2%)" "GO:0005829 (13.9%) GO:0005886 (4.2%) GO:0031522 (4.2%)" "GO:0005524 (13.9%) GO:0004618 (9.7%) GO:0043531 (9.7%)" "gluconeogenesis (9.7%) glycolytic process (9.7%) protein targeting (4.2%)" "cytosol (13.9%) plasma membrane (4.2%) cell envelope Sec protein transport complex (4.2%)" "ATP binding (13.9%) phosphoglycerate kinase activity (9.7%) ADP binding (9.7%)" "IPR001576 (10.9%) IPR015824 (10.9%) IPR036043 (10.9%)" "Phosphoglycerate kinase (10.9%) Phosphoglycerate kinase, N-terminal (10.9%) Phosphoglycerate kinase superfamily (10.9%)" VKGEWDKIKK root "GO:1990451 (46.3%) GO:0071468 (2.7%) GO:0061077 (0.5%)" GO:0030288 (48.4%) "GO:0042802 (0.5%) GO:0042803 (0.5%) GO:0044183 (0.5%)" "cellular stress response to acidic pH (46.3%) cellular response to acidic pH (2.7%) obsolete chaperone-mediated protein folding (0.5%)" outer membrane-bounded periplasmic space (48.4%) "identical protein binding (0.5%) protein homodimerization activity (0.5%) protein folding chaperone (0.5%)" "IPR010486 (25.3%) IPR036831 (25.3%) IPR038303 (25.3%)" "HNS-dependent expression A/B (25.3%) HNS-dependent expression A superfamily (25.3%) HNS-dependent expression A/B superfamily (25.3%)" TVVVEGCEEKLAPLDLIR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0005829 (100%) cytosol (100%) IPR017704 (100%) Putative selenium-binding protein YdfZ (100%) VAEKAVEEGASITLSNTPVAVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" EVLDENYKGEVIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0033539 (33.3%) "GO:0009055 (33.3%) GO:0050660 (33.3%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (33.3%) "electron transfer activity (33.3%) flavin adenine dinucleotide binding (33.3%)" "IPR001308 (16.7%) IPR014729 (16.7%) IPR014730 (16.7%)" "Electron transfer flavoprotein alpha subunit/FixB (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.7%)" SNEAAPASSLTDKER Bifidobacterium adolescentis Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium adolescentis 3.1.11.6 (100%) exodeoxyribonuclease VII (100%) GO:0006308 (25%) "GO:0005829 (25%) GO:0009318 (25%)" GO:0008855 (25%) DNA catabolic process (25%) "cytosol (25%) exodeoxyribonuclease VII complex (25%)" exodeoxyribonuclease VII activity (25%) "IPR003761 (50%) IPR037004 (50%)" "Exonuclease VII, small subunit (50%) Exonuclease VII, small subunit superfamily (50%)" NQADVECEDGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" EVLEAFAACNDLAPLHNPANLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" ANNDLMAPVYKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" TLEKDGYEAVQLGFQEKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" AWIISYKDECFDK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.1.1.173 (100%) 23S rRNA (guanine(2445)-N(2))-methyltransferase (100%) "GO:0003723 (33.3%) GO:0070043 (33.3%) GO:0008990 (28.2%)" "RNA binding (33.3%) rRNA (guanine-N7-)-methyltransferase activity (33.3%) rRNA (guanine-N2-)-methyltransferase activity (28.2%)" "IPR000241 (16.7%) IPR002052 (16.7%) IPR004114 (16.7%)" "Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain (16.7%) DNA methylase, N-6 adenine-specific, conserved site (16.7%) THUMP domain (16.7%)" FLSELTAAEGLER root "1.2.4.2 (99.7%) 1.2.4.- (0.3%)" "oxoglutarate dehydrogenase (succinyl-transferring) (99.7%) With a disulfide as acceptor (0.3%)" "GO:0006099 (19.8%) GO:0006103 (0.1%)" "GO:0005829 (19.8%) GO:0045252 (19.8%) GO:0005737 (0.1%)" "GO:0030976 (19.8%) GO:0004591 (19.8%) GO:0016491 (0.5%)" "tricarboxylic acid cycle (19.8%) 2-oxoglutarate metabolic process (0.1%)" "cytosol (19.8%) oxoglutarate dehydrogenase complex (19.8%) cytoplasm (0.1%)" "thiamine pyrophosphate binding (19.8%) oxoglutarate dehydrogenase (succinyl-transferring) activity (19.8%) oxidoreductase activity (0.5%)" "IPR011603 (15.2%) IPR029061 (15.2%) IPR032106 (14.5%)" "2-oxoglutarate dehydrogenase E1 component (15.2%) Thiamin diphosphate-binding fold (15.2%) 2-oxoglutarate dehydrogenase E1 component, N-terminal domain (14.5%)" VVNIPSFSVKPGQIVGVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" IGSETGDFDIKDVCDCLCEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.6.1.8 (96%) 3.6.1.9 (4%)" "ATP diphosphatase (96%) nucleotide diphosphatase (4%)" "GO:0006203 (12.5%) GO:0006950 (12.5%) GO:0046047 (12.5%)" "GO:0047429 (11.5%) GO:0047693 (1%)" "dGTP catabolic process (12.5%) response to stress (12.5%) TTP catabolic process (12.5%)" "nucleoside triphosphate diphosphatase activity (11.5%) ATP diphosphatase activity (1%)" "IPR004518 (25%) IPR011551 (25%) IPR048011 (25%)" "NTP pyrophosphohydrolase MazG-like domain (25%) NTP pyrophosphohydrolase MazG (25%) MazG-like, C-terminal domain (25%)" YRPETDMADLDNFDAAK root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.6%) GO:0006418 (0.1%) GO:0034605 (0.1%)" "GO:0005829 (14.6%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0000049 (14.6%) GO:0004824 (14.6%) GO:0005524 (14.6%)" "lysyl-tRNA aminoacylation (14.6%) tRNA aminoacylation for protein translation (0.1%) cellular response to heat (0.1%)" "cytosol (14.6%) cytoplasm (0.1%) membrane (0.1%)" "tRNA binding (14.6%) lysine-tRNA ligase activity (14.6%) ATP binding (14.6%)" "IPR004364 (11.8%) IPR045864 (11.8%) IPR006195 (11.7%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (11.8%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.8%) Aminoacyl-tRNA synthetase, class II (11.7%)" RLPLTPEAVDMLTDCGHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.1 (100%) alanine dehydrogenase (100%) GO:0042853 (33.3%) GO:0005886 (33.3%) GO:0000286 (33.3%) L-alanine catabolic process (33.3%) plasma membrane (33.3%) alanine dehydrogenase activity (33.3%) "IPR007698 (23.8%) IPR007886 (23.8%) IPR008141 (23.8%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (23.8%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (23.8%) Alanine dehydrogenase (23.8%)" VLDVCDALERGDYETVGQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" NSSIVLVAESEVTGGAMGVAER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0016208 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) AMP binding (9.1%)" "IPR000023 (16.7%) IPR012003 (16.7%) IPR012828 (16.7%)" "Phosphofructokinase domain (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic (16.7%)" LIDLLNRPQITIENIAGHIPAFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0002098 (25%) GO:0030488 (25%)" GO:0005829 (25%) GO:0050660 (25%) "tRNA wobble uridine modification (25%) tRNA methylation (25%)" cytosol (25%) flavin adenine dinucleotide binding (25%) "IPR002218 (11.1%) IPR004416 (11.1%) IPR020595 (11.1%)" "tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related (11.1%) tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (11.1%) MnmG-related, conserved site (11.1%)" FGVPFVGEPVTFTGWYK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR024311 (25%) IPR025112 (25%) IPR032186 (25%)" "Lipocalin-like domain (25%) Putative carbohydrate metabolism domain (25%) Domain of unknown function DUF5018 (25%)" AAIEYAILHQLPSVTLVHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.42 (100%) isocitrate dehydrogenase (NADP(+)) (100%) "GO:0006097 (20%) GO:0006099 (20%)" "GO:0000287 (20%) GO:0004450 (20%) GO:0051287 (20%)" "glyoxylate cycle (20%) tricarboxylic acid cycle (20%)" "magnesium ion binding (20%) isocitrate dehydrogenase (NADP+) activity (20%) NAD binding (20%)" "IPR004439 (33.3%) IPR019818 (33.3%) IPR024084 (33.3%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (33.3%) Isocitrate/isopropylmalate dehydrogenase, conserved site (33.3%) Isopropylmalate dehydrogenase-like domain (33.3%)" VGESVGSFYGYKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.6%) IPR012910 (12.6%) IPR023996 (12.6%)" "TonB-dependent receptor-like, beta-barrel (12.6%) TonB-dependent receptor, plug domain (12.6%) TonB-dependent outer membrane protein, SusC/RagA (12.6%)" NLVYTPHIYVVDLVIDGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.8%) "GO:0022625 (24.8%) GO:0005840 (0.6%)" "GO:0003735 (24.8%) GO:0008097 (24.8%)" translation (24.8%) "cytosolic large ribosomal subunit (24.8%) ribosome (0.6%)" "structural constituent of ribosome (24.8%) 5S rRNA binding (24.8%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" SKLSDQEIEQTLQAFEAR root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (35.4%) GO:0042026 (0.2%)" "GO:0030313 (14.3%) GO:0042597 (13.2%) GO:0030288 (0.2%)" "GO:0003755 (35.5%) GO:0016853 (1.1%) GO:0044183 (0.2%)" "protein folding (35.4%) protein refolding (0.2%)" "cell envelope (14.3%) periplasmic space (13.2%) outer membrane-bounded periplasmic space (0.2%)" "peptidyl-prolyl cis-trans isomerase activity (35.5%) isomerase activity (1.1%) protein folding chaperone (0.2%)" "IPR000774 (25.2%) IPR036944 (25.2%) IPR046357 (24.9%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25.2%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25.2%) Peptidyl-prolyl cis-trans isomerase domain superfamily (24.9%)" VYELTAGKNPGDVNIR Collinsella aerofaciens Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella aerofaciens 3.5.3.6 (100%) arginine deiminase (100%) GO:0019546 (33.3%) GO:0005737 (33.3%) GO:0016990 (33.3%) L-arginine deiminase pathway (33.3%) cytoplasm (33.3%) arginine deiminase activity (33.3%) IPR003876 (100%) Arginine deiminase (100%) ALKDRDYIEFWGIEPNPTIETLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (25%) IPR018211 (25%) IPR044731 (25%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (25%) Alcohol dehydrogenase, iron-type, conserved site (25%) Butanol dehydrogenase-like (25%)" YNPALEAEGKNPFTLDSKEPNWDDFKGFLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "1.2.7.1 (70%) 1.2.7.- (30%)" "pyruvate synthase (70%) With an iron-sulfur protein as acceptor (30%)" "GO:0006979 (15.2%) GO:0022900 (15.2%) GO:0044281 (8.6%)" "GO:0005506 (15.2%) GO:0030976 (15.2%) GO:0051539 (15.2%)" "response to oxidative stress (15.2%) electron transport chain (15.2%) small molecule metabolic process (8.6%)" "iron ion binding (15.2%) thiamine pyrophosphate binding (15.2%) 4 iron, 4 sulfur cluster binding (15.2%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" ELASLAEIFVNDAFGTAHR Clostridia Bacteria Bacillati Bacillota Clostridia "2.7.2.3 (94.5%) 5.3.1.1 (5.5%)" "phosphoglycerate kinase (94.5%) triose-phosphate isomerase (5.5%)" "GO:0006094 (16.4%) GO:0006096 (16.4%)" GO:0005829 (16.4%) "GO:0004618 (16.4%) GO:0005524 (16.4%) GO:0043531 (16.4%)" "gluconeogenesis (16.4%) glycolytic process (16.4%)" cytosol (16.4%) "phosphoglycerate kinase activity (16.4%) ATP binding (16.4%) ADP binding (16.4%)" "IPR001576 (23.8%) IPR015824 (23.8%) IPR036043 (23.8%)" "Phosphoglycerate kinase (23.8%) Phosphoglycerate kinase, N-terminal (23.8%) Phosphoglycerate kinase superfamily (23.8%)" DGNKDVAVVVAGDK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola SYEDRGDQFK Pseudomonadati Bacteria Pseudomonadati 6.3.2.9 (100%) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase (100%) "GO:0008360 (14.3%) GO:0051301 (14.3%) GO:0009252 (14.1%)" GO:0005737 (14.3%) "GO:0005524 (14.3%) GO:0008764 (14.3%) GO:0016874 (0.2%)" "regulation of cell shape (14.3%) cell division (14.3%) peptidoglycan biosynthetic process (14.1%)" cytoplasm (14.3%) "ATP binding (14.3%) UDP-N-acetylmuramoylalanine-D-glutamate ligase activity (14.3%) ligase activity (0.2%)" "IPR005762 (20.2%) IPR036615 (20.2%) IPR013221 (19.8%)" "UDP-N-acetylmuramoylalanine-D-glutamate ligase MurD (20.2%) Mur ligase, C-terminal domain superfamily (20.2%) Mur ligase, central (19.8%)" ATSHFIEGEKVSDEPVNIDWTNR KTLEEAGAEVELK Pseudomonadati Bacteria Pseudomonadati GO:0006412 (25%) "GO:0022625 (24.8%) GO:0005840 (0.5%)" "GO:0003735 (25%) GO:0003729 (24.8%)" translation (25%) "cytosolic large ribosomal subunit (24.8%) ribosome (0.5%)" "structural constituent of ribosome (25%) mRNA binding (24.8%)" "IPR013823 (20.2%) IPR014719 (20.2%) IPR000206 (20%)" "Large ribosomal subunit protein bL12, C-terminal (20.2%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20.2%) Large ribosomal subunit protein bL12 (20%)" TESTEGDKEGKKESR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" AGLNDKQNEGMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR032276 (100%) Protein of unknown function DUF4836 (100%) VSFTPEQIRDNAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (16.7%) GO:0006417 (16.7%)" GO:0015934 (16.7%) "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" "translation (16.7%) regulation of translation (16.7%)" large ribosomal subunit (16.7%) "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR002143 (16.7%) IPR005878 (16.7%) IPR016095 (16.7%)" "Large ribosomal subunit protein uL1 (16.7%) Large ribosomal subunit protein uL1, bacteria (16.7%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" RNDIQIVGINDLCPVDYLAYMLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0006006 (24.7%) "GO:0051287 (25.2%) GO:0050661 (24.7%) GO:0016620 (13.3%)" glucose metabolic process (24.7%) "NAD binding (25.2%) NADP binding (24.7%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (13.3%)" "IPR020828 (16.9%) IPR020831 (16.9%) IPR020830 (16.7%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.9%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (16.9%) Glyceraldehyde 3-phosphate dehydrogenase, active site (16.7%)" IAEQEGIAEDGYR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "3.9.1.- (90.2%) 3.-.-.- (3.3%) 3.6.1.17 (3.3%)" "Acting on phosphorus-nitrogen bonds (90.2%) Hydrolases (3.3%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (3.3%)" GO:0055130 (0.3%) "GO:0005737 (0.3%) GO:0005829 (0.3%)" "GO:0016787 (47.2%) GO:0000166 (43.9%) GO:0003824 (7%)" D-alanine catabolic process (0.3%) "cytoplasm (0.3%) cytosol (0.3%)" "hydrolase activity (47.2%) nucleotide binding (43.9%) catalytic activity (7%)" "IPR001310 (25.1%) IPR011146 (25.1%) IPR036265 (25.1%)" "Histidine triad (HIT) protein (25.1%) HIT-like domain (25.1%) HIT-like superfamily (25.1%)" LIITNYPEGQVEEMEAVNNPEDPSAGTHTIEFSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (25%) GO:0005829 (25%) "GO:0004819 (25%) GO:0005524 (25%)" glutaminyl-tRNA aminoacylation (25%) cytosol (25%) "glutamine-tRNA ligase activity (25%) ATP binding (25%)" "IPR001412 (10.2%) IPR004514 (10.2%) IPR020058 (10.2%)" "Aminoacyl-tRNA synthetase, class I, conserved site (10.2%) Glutamine-tRNA synthetase (10.2%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (10.2%)" AAEDFEFADVDHLGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "5.4.2.10 (71.4%) 5.4.2.2 (28.6%)" "phosphoglucosamine mutase (71.4%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (28.6%)" "GO:0005975 (13.7%) GO:0006048 (13.7%) GO:0009252 (13.7%)" GO:0005829 (13.7%) "GO:0000287 (13.7%) GO:0004615 (13.7%) GO:0008966 (13.7%)" "carbohydrate metabolic process (13.7%) UDP-N-acetylglucosamine biosynthetic process (13.7%) peptidoglycan biosynthetic process (13.7%)" cytosol (13.7%) "magnesium ion binding (13.7%) phosphomannomutase activity (13.7%) phosphoglucosamine mutase activity (13.7%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" KENVHILNGNAEDLEAECANYEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.4%) GO:0006043 (14.4%) GO:0006046 (14.4%)" "GO:0005829 (12.7%) GO:0005737 (0.8%)" "GO:0004342 (14.4%) GO:0042802 (14.4%)" "carbohydrate metabolic process (14.4%) glucosamine catabolic process (14.4%) N-acetylglucosamine catabolic process (14.4%)" "cytosol (12.7%) cytoplasm (0.8%)" "glucosamine-6-phosphate deaminase activity (14.4%) identical protein binding (14.4%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" RAENGMIYDPVTIK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (20.3%) GO:0006177 (20.1%)" "GO:0003938 (20.3%) GO:0046872 (20.1%) GO:0000166 (19.1%)" "GTP biosynthetic process (20.3%) GMP biosynthetic process (20.1%)" "IMP dehydrogenase activity (20.3%) metal ion binding (20.1%) nucleotide binding (19.1%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" LSDYGIKESDLDALVEPIDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (25%) IPR018211 (25%) IPR044731 (25%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (25%) Alcohol dehydrogenase, iron-type, conserved site (25%) Butanol dehydrogenase-like (25%)" IHVTYLDEELKEHDEWVEGYLAR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.5.1.88 (100%) peptide deformylase (100%) "GO:0006412 (25%) GO:0043686 (25%)" "GO:0042586 (25%) GO:0046872 (25%)" "translation (25%) obsolete co-translational protein modification (25%)" "peptide deformylase activity (25%) metal ion binding (25%)" "IPR023635 (50%) IPR036821 (50%)" "Peptide deformylase (50%) Peptide deformylase superfamily (50%)" GKEEEFAFLELLEER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005975 (25.2%) GO:0006099 (25.2%)" GO:0005829 (24.3%) "GO:0036440 (24.3%) GO:0046912 (0.9%)" "carbohydrate metabolic process (25.2%) tricarboxylic acid cycle (25.2%)" cytosol (24.3%) "citrate synthase activity (24.3%) acyltransferase activity, acyl groups converted into alkyl on transfer (0.9%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" YRDPDYSAKDLAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0003700 (50%) GO:0043565 (50%)" "DNA-binding transcription factor activity (50%) sequence-specific DNA binding (50%)" "IPR009057 (50%) IPR018060 (50%)" "Homedomain-like superfamily (50%) AraC-like, DNA binding HTH domain (50%)" QGLFGEILHGTCGYEHDLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.49 (100%) alpha-N-acetylgalactosaminidase (100%) "GO:0000166 (50%) GO:0016798 (42.9%) GO:0008456 (7.1%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (42.9%) alpha-N-acetylgalactosaminidase activity (7.1%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" TFNLNNMGDGSHTR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (100%) cell outer membrane (100%) "IPR012944 (33.8%) IPR033985 (33.8%) IPR011990 (32.4%)" "RagB/SusD domain (33.8%) SusD-like, N-terminal (33.8%) Tetratricopeptide-like helical domain superfamily (32.4%)" TTFIINEEGIVTNIIGPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) "GO:0034599 (25%) GO:0045454 (25%)" GO:0005737 (25%) GO:0008379 (25%) "cellular response to oxidative stress (25%) cell redox homeostasis (25%)" cytoplasm (25%) thioredoxin peroxidase activity (25%) "IPR000866 (20%) IPR013766 (20%) IPR024706 (20%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (20%) Thioredoxin domain (20%) Peroxiredoxin, AhpC-type (20%)" AQMNFGGVVENVMTREEFPLEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.86 (100%) ketol-acid reductoisomerase (NADP(+)) (100%) "GO:0009097 (21.4%) GO:0009099 (21.4%)" "GO:0004455 (21.4%) GO:0046872 (21.4%) GO:0016853 (14.3%)" "isoleucine biosynthetic process (21.4%) L-valine biosynthetic process (21.4%)" "ketol-acid reductoisomerase activity (21.4%) metal ion binding (21.4%) isomerase activity (14.3%)" "IPR000506 (16.7%) IPR008927 (16.7%) IPR013023 (16.7%)" "Ketol-acid reductoisomerase, C-terminal (16.7%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.7%) Ketol-acid reductoisomerase (16.7%)" IVAALLENNQTPEGIR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.11 (100%) serine--tRNA ligase (100%) "GO:0006434 (24.8%) GO:0006412 (0.1%) GO:0006418 (0.1%)" "GO:0005737 (24.7%) GO:0005829 (0.1%)" "GO:0004828 (24.9%) GO:0005524 (24.9%) GO:0016874 (0.2%)" "seryl-tRNA aminoacylation (24.8%) translation (0.1%) tRNA aminoacylation for protein translation (0.1%)" "cytoplasm (24.7%) cytosol (0.1%)" "serine-tRNA ligase activity (24.9%) ATP binding (24.9%) ligase activity (0.2%)" "IPR045864 (13.8%) IPR002314 (13.8%) IPR006195 (13.8%)" "Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (13.8%) Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (13.8%) Aminoacyl-tRNA synthetase, class II (13.8%)" AAGYEPGKDVMIGMDCASSEFYHDGIYDYTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.3%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.4%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.3%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.4%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" FTIISDEVDDFVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR012912 (50%) IPR024047 (50%)" "Plasmid pRiA4b, Orf3-like domain (50%) MM3350-like superfamily (50%)" AMFIIAGNPECAEELKAAGIENFIHVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" VAGEDIQVSAPTTAKQPANQPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0000917 (14.3%) GO:0043093 (14.3%) GO:0051258 (14.3%)" "GO:0005737 (14.3%) GO:0032153 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%)" "division septum assembly (14.3%) FtsZ-dependent cytokinesis (14.3%) protein polymerization (14.3%)" "cytoplasm (14.3%) cell division site (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" NGYTLDNLTYFIGHQANMR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) "GO:0006633 (30.2%) GO:0044550 (30.2%)" "GO:0004315 (30.2%) GO:0033818 (9.3%)" "fatty acid biosynthetic process (30.2%) secondary metabolite biosynthetic process (30.2%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (30.2%) beta-ketoacyl-acyl-carrier-protein synthase III activity (9.3%)" "IPR013747 (33.3%) IPR013751 (33.3%) IPR016039 (33.3%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (33.3%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (33.3%) Thiolase-like (33.3%)" AQPVDLTQAAENSLHAVVHIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.4.21.107 (75%) 3.4.21.- (25%)" "peptidase Do (75%) Serine endopeptidases (25%)" GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001478 (22.1%) IPR001940 (22.1%) IPR009003 (22.1%)" "PDZ domain (22.1%) Peptidase S1C (22.1%) Peptidase S1, PA clan (22.1%)" GGTTHLGLPVFNTVR root "6.2.1.5 (99.2%) 6.2.1.4 (0.7%) 6.2.1.- (0.1%)" "succinate--CoA ligase (ADP-forming) (99.2%) succinate--CoA ligase (GDP-forming) (0.7%) Acid--thiol ligases (0.1%)" "GO:0006099 (19.9%) GO:0006104 (0%)" "GO:0009361 (19.9%) GO:0005739 (0.2%) GO:0005829 (0%)" "GO:0004775 (19.9%) GO:0004776 (19.9%) GO:0000166 (19.7%)" "tricarboxylic acid cycle (19.9%) succinyl-CoA metabolic process (0%)" "succinate-CoA ligase complex (ADP-forming) (19.9%) mitochondrion (0.2%) cytosol (0%)" "succinate-CoA ligase (ADP-forming) activity (19.9%) succinate-CoA ligase (GDP-forming) activity (19.9%) nucleotide binding (19.7%)" "IPR003781 (14.5%) IPR036291 (14.5%) IPR016102 (14.3%)" "CoA-binding (14.5%) NAD(P)-binding domain superfamily (14.5%) Succinyl-CoA synthetase-like (14.3%)" TFAEKPAEFDPR Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.4%) GO:0030388 (24.4%) GO:0005975 (0.5%)" GO:0016020 (0.5%) "GO:0008270 (24.9%) GO:0004332 (24.4%) GO:0016829 (0.5%)" "glycolytic process (24.4%) fructose 1,6-bisphosphate metabolic process (24.4%) carbohydrate metabolic process (0.5%)" membrane (0.5%) "zinc ion binding (24.9%) fructose-bisphosphate aldolase activity (24.4%) lyase activity (0.5%)" "IPR000771 (25.1%) IPR013785 (25.1%) IPR050246 (25.1%)" "Fructose-bisphosphate aldolase, class-II (25.1%) Aldolase-type TIM barrel (25.1%) Class II Fructose-bisphosphate Aldolase (25.1%)" AGADRVELYTEPYATAYPKDPAAAVAPFVEAAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.6.99.2 (100%) pyridoxine 5'-phosphate synthase (100%) GO:0008615 (33.3%) GO:0005829 (33.3%) GO:0033856 (33.3%) pyridoxine biosynthetic process (33.3%) cytosol (33.3%) pyridoxine 5'-phosphate synthase activity (33.3%) "IPR004569 (33.3%) IPR013785 (33.3%) IPR036130 (33.3%)" "Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ (33.3%) Aldolase-type TIM barrel (33.3%) Pyridoxine 5'-phosphate synthase (33.3%)" NVIITLTDLHLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR032574 (100%) Protein of unknown function DUF4924 (100%) MWELIDADLPFLHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.48 (100%) uridine/cytidine kinase (100%) "GO:0005524 (50%) GO:0016301 (40%) GO:0004849 (10%)" "ATP binding (50%) kinase activity (40%) uridine kinase activity (10%)" "IPR006083 (32.3%) IPR018163 (32.3%) IPR027417 (32.3%)" "Phosphoribulokinase/uridine kinase (32.3%) Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily (32.3%) P-loop containing nucleoside triphosphate hydrolase (32.3%)" VTEMVAGDIGATVK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" KMAEYGTNVVGGTSPGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.2.1.5 (96.3%) 6.2.1.- (3.7%)" "succinate--CoA ligase (ADP-forming) (96.3%) Acid--thiol ligases (3.7%)" GO:0006099 (19.8%) GO:0009361 (19.8%) "GO:0000166 (19.8%) GO:0004775 (19.8%) GO:0004776 (19.8%)" tricarboxylic acid cycle (19.8%) succinate-CoA ligase complex (ADP-forming) (19.8%) "nucleotide binding (19.8%) succinate-CoA ligase (ADP-forming) activity (19.8%) succinate-CoA ligase (GDP-forming) activity (19.8%)" "IPR003781 (14.3%) IPR005810 (14.3%) IPR005811 (14.3%)" "CoA-binding (14.3%) Succinyl-CoA ligase, alpha subunit (14.3%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.3%)" ENGDLERIPSKVENGQVVFK Streptococcus Bacteria Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus "GO:0005576 (51.1%) GO:0016020 (48.9%)" "extracellular region (51.1%) membrane (48.9%)" "IPR019931 (15.5%) IPR031792 (14.8%) IPR038349 (14.8%)" "LPXTG cell wall anchor domain (15.5%) Surface antigen, GAG-binding domain (14.8%) Surface antigen, GAG-binding domain superfamily (14.8%)" EGVEKGNEEAQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0033178 (48.4%) "GO:0046961 (48.4%) GO:0016787 (3.1%)" proton-transporting two-sector ATPase complex, catalytic domain (48.4%) "proton-transporting ATPase activity, rotational mechanism (48.4%) hydrolase activity (3.1%)" IPR002842 (100%) V-type ATPase subunit E (100%) SDREASEGCVLAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (49.2%) GO:0003746 (50.8%) cytoplasm (49.2%) translation elongation factor activity (50.8%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" AAYSSGKPAIGVGAGNTPVVIDETADIKR root "1.1.1.1 (53.3%) 1.2.1.10 (46.7%)" "alcohol dehydrogenase (53.3%) acetaldehyde dehydrogenase (acetylating) (46.7%)" "GO:0015976 (15.3%) GO:0006066 (15.3%) GO:0006115 (0%)" "GO:0005737 (0.1%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0046872 (19.9%) GO:0008774 (18.3%) GO:0004022 (18.1%)" "carbon utilization (15.3%) alcohol metabolic process (15.3%) ethanol biosynthetic process (0%)" "cytoplasm (0.1%) cytosol (0%) membrane (0%)" "metal ion binding (19.9%) acetaldehyde dehydrogenase (acetylating) activity (18.3%) alcohol dehydrogenase (NAD+) activity (18.1%)" "IPR015590 (12.1%) IPR016161 (12.1%) IPR016162 (12.1%)" "Aldehyde dehydrogenase domain (12.1%) Aldehyde/histidinol dehydrogenase (12.1%) Aldehyde dehydrogenase, N-terminal (12.1%)" IELLEPTSPESTIAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.1.99.1 (98%) 5.1.99.- (2%)" "methylmalonyl-CoA epimerase (98%) Acting on other compounds (2%)" GO:0046491 (47.9%) "GO:0004493 (47.9%) GO:0051213 (2.1%) GO:0016829 (1.4%)" L-methylmalonyl-CoA metabolic process (47.9%) "methylmalonyl-CoA epimerase activity (47.9%) dioxygenase activity (2.1%) lyase activity (1.4%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" AYAAASVLTTAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) DFSGIRNEEDYLITENGAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25.7%) GO:0005829 (24.3%) "GO:0030145 (24.3%) GO:0070006 (24.3%) GO:0004177 (1.4%)" proteolysis (25.7%) cytosol (24.3%) "manganese ion binding (24.3%) metalloaminopeptidase activity (24.3%) aminopeptidase activity (1.4%)" "IPR000994 (20.4%) IPR036005 (20.4%) IPR052433 (20.4%)" "Peptidase M24 (20.4%) Creatinase/aminopeptidase-like (20.4%) Xaa-Pro dipeptidase-like (20.4%)" KAVEAFVDTVSNELK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" PTDKLNIAGVGIGGMGNANLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (92.9%) GO:0050112 (7.1%)" "nucleotide binding (92.9%) inositol 2-dehydrogenase (NAD+) activity (7.1%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" ALVSADITVNK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.2%) GO:0035999 (14.9%) GO:0032259 (11.8%)" "GO:0005829 (15.2%) GO:0005737 (0.1%)" "GO:0004372 (15.2%) GO:0030170 (15.2%) GO:0008168 (11.8%)" "glycine biosynthetic process from serine (15.2%) tetrahydrofolate interconversion (14.9%) methylation (11.8%)" "cytosol (15.2%) cytoplasm (0.1%)" "glycine hydroxymethyltransferase activity (15.2%) pyridoxal phosphate binding (15.2%) methyltransferase activity (11.8%)" "IPR015421 (14.3%) IPR015422 (14.3%) IPR015424 (14.3%)" "Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%) Pyridoxal phosphate-dependent transferase (14.3%)" YRNQQGAVASR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 3.5.4.13 (100%) dCTP deaminase (100%) "GO:0006229 (20.6%) GO:0015949 (20.6%) GO:0006226 (15.7%)" "GO:0005829 (0.2%) GO:0032991 (0.2%)" "GO:0008829 (20.8%) GO:0000166 (20.4%) GO:0016787 (0.8%)" "dUTP biosynthetic process (20.6%) nucleobase-containing small molecule interconversion (20.6%) dUMP biosynthetic process (15.7%)" "cytosol (0.2%) protein-containing complex (0.2%)" "dCTP deaminase activity (20.8%) nucleotide binding (20.4%) hydrolase activity (0.8%)" "IPR036157 (33.6%) IPR011962 (33.3%) IPR033704 (33%)" "dUTPase-like superfamily (33.6%) dCTP deaminase (33.3%) dUTPase, trimeric (33%)" VLPIYQSTTFKYETSEQMAR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "2.5.1.49 (50%) 4.4.1.11 (50%)" "O-acetylhomoserine aminocarboxypropyltransferase (50%) methionine gamma-lyase (50%)" "GO:0006535 (13.9%) GO:0019346 (13.9%) GO:0071269 (13.9%)" GO:0005737 (13.9%) "GO:0003961 (13.9%) GO:0004124 (13.9%) GO:0030170 (13.9%)" "cysteine biosynthetic process from serine (13.9%) transsulfuration (13.9%) L-homocysteine biosynthetic process (13.9%)" cytoplasm (13.9%) "O-acetylhomoserine aminocarboxypropyltransferase activity (13.9%) cysteine synthase activity (13.9%) pyridoxal phosphate binding (13.9%)" "IPR000277 (20%) IPR006235 (20%) IPR015421 (20%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (20%) O-acetylhomoserine/O-acetylserine sulfhydrylase (20%) Pyridoxal phosphate-dependent transferase, major domain (20%)" HMIMSGEYDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "7.2.1.1 (98.8%) 1.6.5.- (1.2%)" "NADH:ubiquinone reductase (Na(+)-transporting) (98.8%) With a quinone or similar compound as acceptor (1.2%)" GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (23.9%) IPR022615 (23.8%) IPR056148 (23.8%)" "Na(+)-translocating NADH-quinone reductase subunit A (23.9%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (23.8%) NqrA, second alpha/beta domain (23.8%)" GLPIPVVITVYADR root "GO:0006412 (24.8%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (24.7%) GO:0005840 (0.4%) GO:0005829 (0.1%)" "GO:0003735 (24.8%) GO:0070180 (24.7%) GO:0019843 (0.1%)" "translation (24.8%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.7%) ribosome (0.4%) cytosol (0.1%)" "structural constituent of ribosome (24.8%) large ribosomal subunit rRNA binding (24.7%) rRNA binding (0.1%)" "IPR000911 (14.7%) IPR036796 (14.7%) IPR020784 (14.7%)" "Ribosomal protein uL11 (14.7%) Large ribosomal subunit protein uL11, N-terminal domain superfamily (14.7%) Large ribosomal subunit protein uL11, N-terminal (14.7%)" ATLSAIKNPDAMTDYLMAIVGAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" IAMIAPNIILNIIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006207 (21.7%) GO:0006221 (21.7%)" GO:0009347 (21.7%) "GO:0046872 (21.7%) GO:0016740 (13%)" "'de novo' pyrimidine nucleobase biosynthetic process (21.7%) pyrimidine nucleotide biosynthetic process (21.7%)" aspartate carbamoyltransferase complex (21.7%) "metal ion binding (21.7%) transferase activity (13%)" "IPR002801 (20%) IPR020542 (20%) IPR020545 (20%)" "Aspartate transcarbamylase regulatory subunit (20%) Aspartate carbamoyltransferase regulatory subunit, C-terminal (20%) Aspartate carbamoyltransferase regulatory subunit, N-terminal (20%)" ALLLEIKPDQMFVAGDLADPHGTHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.1%) GO:0006044 (32.1%)" "GO:0004342 (32.1%) GO:0016853 (3.6%)" "carbohydrate metabolic process (32.1%) N-acetylglucosamine metabolic process (32.1%)" "glucosamine-6-phosphate deaminase activity (32.1%) isomerase activity (3.6%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" TSNHHDVVLNWLKEHA Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.11.1.24 (96.7%) 1.11.1.15 (2.2%) 1.11.1.- (1.1%)" "thioredoxin-dependent peroxiredoxin (96.7%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (2.2%) Peroxidases (1.1%)" "GO:0034599 (24.4%) GO:0045454 (24.4%) GO:0006979 (0.3%)" "GO:0005737 (24.4%) GO:0005829 (0.3%)" "GO:0008379 (24.4%) GO:0004601 (1.4%) GO:0032843 (0.3%)" "cellular response to oxidative stress (24.4%) cell redox homeostasis (24.4%) response to oxidative stress (0.3%)" "cytoplasm (24.4%) cytosol (0.3%)" "thioredoxin peroxidase activity (24.4%) peroxidase activity (1.4%) hydroperoxide reductase activity (0.3%)" "IPR036249 (20.8%) IPR000866 (20.3%) IPR050924 (20.3%)" "Thioredoxin-like superfamily (20.8%) Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (20.3%) Thiol-specific peroxidase BCP/PrxQ (20.3%)" AQVPGFRPGMVPMSLVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.5%) GO:0043335 (16.5%) GO:0051083 (16.5%)" "GO:0003755 (16.5%) GO:0043022 (16.5%) GO:0044183 (16.5%)" "protein transport (16.5%) protein unfolding (16.5%) 'de novo' cotranslational protein folding (16.5%)" "peptidyl-prolyl cis-trans isomerase activity (16.5%) ribosome binding (16.5%) protein folding chaperone (16.5%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" RKEILLGTNQYPNFNEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" EVFLPAFDELKDCLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.2.1 (100%) argininosuccinate lyase (100%) "GO:0042450 (32.9%) GO:0006526 (1.3%)" GO:0005829 (32.9%) GO:0004056 (32.9%) "L-arginine biosynthetic process via ornithine (32.9%) L-arginine biosynthetic process (1.3%)" cytosol (32.9%) argininosuccinate lyase activity (32.9%) "IPR000362 (16.7%) IPR008948 (16.7%) IPR009049 (16.7%)" "Fumarate lyase family (16.7%) L-Aspartase-like (16.7%) Argininosuccinate lyase (16.7%)" IGKEMQLFMFSDTVGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004829 (16.7%) GO:0005524 (16.7%)" threonyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) threonine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" GETQSLTSVTLGTKLDEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%) GO:0006401 (0.1%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%) RNA catabolic process (0.1%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8%) IPR012162 (8%) IPR015847 (8%)" "Exoribonuclease, phosphorolytic domain 1 (8%) Polyribonucleotide nucleotidyltransferase (8%) Exoribonuclease, phosphorolytic domain 2 (8%)" VEDVDAENVAMKYEAWGWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" AMGGQIGLSICEDDKLDLAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" WCPGCGDHFFLASLHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.3 (70%) 1.2.-.- (30%)" "2-oxoglutarate synthase (70%) Acting on the aldehyde or oxo group of donors (30%)" GO:0044281 (32.9%) "GO:0030976 (33.6%) GO:0016625 (31.4%) GO:0047553 (2.1%)" small molecule metabolic process (32.9%) "thiamine pyrophosphate binding (33.6%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (31.4%) 2-oxoglutarate synthase activity (2.1%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" YYQGTPSPVK root "1.1.1.42 (99.9%) 1.1.1.- (0.1%)" "isocitrate dehydrogenase (NADP(+)) (99.9%) With NAD(+) or NADP(+) as acceptor (0.1%)" "GO:0006099 (21.3%) GO:0006097 (18%) GO:0006979 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004450 (21.3%) GO:0000287 (18%) GO:0051287 (18%)" "tricarboxylic acid cycle (21.3%) glyoxylate cycle (18%) response to oxidative stress (0%)" "cytoplasm (0%) cytosol (0%)" "isocitrate dehydrogenase (NADP+) activity (21.3%) magnesium ion binding (18%) NAD binding (18%)" "IPR004439 (35.2%) IPR024084 (35.2%) IPR019818 (29.7%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (35.2%) Isopropylmalate dehydrogenase-like domain (35.2%) Isocitrate/isopropylmalate dehydrogenase, conserved site (29.7%)" IVKPVYEAVKEWDEPVAIAVLPDHPTPCELR Phocaeicola acetigenes Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola acetigenes 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) GNFDPTYLTHAAR Pseudomonadati Bacteria Pseudomonadati "GO:0006089 (32.9%) GO:1903457 (0.4%)" "GO:0046872 (33.2%) GO:0051539 (32.9%) GO:0004459 (0.4%)" "lactate metabolic process (32.9%) lactate catabolic process (0.4%)" "metal ion binding (33.2%) 4 iron, 4 sulfur cluster binding (32.9%) L-lactate dehydrogenase (NAD+) activity (0.4%)" "IPR003741 (14%) IPR004452 (14%) IPR017896 (14%)" "LUD domain (14%) L-lactate oxidation iron-sulfur protein LutB/LldF (14%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14%)" VLDLIAHMASVNC Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0006006 (24.4%) "GO:0050661 (24.4%) GO:0051287 (24.4%) GO:0016620 (14.1%)" glucose metabolic process (24.4%) "NADP binding (24.4%) NAD binding (24.4%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (14.1%)" "IPR020829 (17.5%) IPR020831 (17.5%) IPR006424 (16.3%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.5%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.5%) Glyceraldehyde-3-phosphate dehydrogenase, type I (16.3%)" KVSPHVTNVVEVDVTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0005737 (33.3%) "GO:0016407 (33.3%) GO:0031405 (33.3%)" cytoplasm (33.3%) "acetyltransferase activity (33.3%) lipoic acid binding (33.3%)" "IPR000089 (12.5%) IPR001078 (12.5%) IPR003016 (12.5%)" "Biotin/lipoyl attachment (12.5%) 2-oxoacid dehydrogenase acyltransferase, catalytic domain (12.5%) 2-oxo acid dehydrogenase, lipoyl-binding site (12.5%)" NEGAVTAPTAGLHFSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.99.17 (100%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (100%) "GO:0002099 (32.8%) GO:0008616 (1.6%)" GO:0005737 (32.8%) GO:0051075 (32.8%) "tRNA wobble guanine modification (32.8%) tRNA queuosine(34) biosynthetic process (1.6%)" cytoplasm (32.8%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity (32.8%) "IPR003699 (25%) IPR036100 (25%) IPR042118 (25%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA (25%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily (25%) QueA, domain 1 (25%)" LTDRPTGHYDVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0051539 (34.8%) GO:0003824 (32.6%) GO:0046872 (32.6%)" "4 iron, 4 sulfur cluster binding (34.8%) catalytic activity (32.6%) metal ion binding (32.6%)" "IPR013785 (34.8%) IPR007197 (32.6%) IPR040084 (32.6%)" "Aldolase-type TIM barrel (34.8%) Radical SAM (32.6%) GTPase Obg (32.6%)" NVGSFDNEDPTIGSGMVGAPACGDVMK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales GO:0016226 (25%) GO:0005737 (25%) "GO:0005506 (25%) GO:0051536 (25%)" iron-sulfur cluster assembly (25%) cytoplasm (25%) "iron ion binding (25%) iron-sulfur cluster binding (25%)" "IPR002871 (50%) IPR011339 (50%)" "NIF system FeS cluster assembly, NifU, N-terminal (50%) Iron-sulfur cluster assembly scaffold protein IscU (50%)" AAFPLEWLHDSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" EMILAENAEGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0016301 (25.2%) GO:0050242 (25.2%) GO:0046872 (24.9%)" "kinase activity (25.2%) pyruvate, phosphate dikinase activity (25.2%) metal ion binding (24.9%)" "IPR000121 (10.1%) IPR010121 (10.1%) IPR015813 (10.1%)" "PEP-utilising enzyme, C-terminal (10.1%) Pyruvate, phosphate dikinase (10.1%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (10.1%)" VMMIDEPAILDQAIAR root "3.1.3.23 (96.2%) 3.1.3.- (3.8%)" "sugar-phosphatase (96.2%) Phosphoric monoester hydrolases (3.8%)" GO:0016311 (0.4%) GO:0005829 (32.6%) "GO:0000287 (32.6%) GO:0016791 (24.9%) GO:0050308 (8.4%)" dephosphorylation (0.4%) cytosol (32.6%) "magnesium ion binding (32.6%) phosphatase activity (24.9%) sugar-phosphatase activity (8.4%)" "IPR023214 (25.6%) IPR036412 (25.6%) IPR006379 (25.1%)" "HAD superfamily (25.6%) HAD-like superfamily (25.6%) HAD-superfamily hydrolase, subfamily IIB (25.1%)" AEFYSEVLTIVVDGKEIK root "GO:0006412 (24.3%) GO:0000027 (0.2%) GO:0002181 (0.2%)" "GO:0022625 (24.3%) GO:0005840 (0.7%) GO:0005737 (0.2%)" "GO:0003735 (24.5%) GO:0008097 (24.5%)" "translation (24.3%) ribosomal large subunit assembly (0.2%) cytoplasmic translation (0.2%)" "cytosolic large ribosomal subunit (24.3%) ribosome (0.7%) cytoplasm (0.2%)" "structural constituent of ribosome (24.5%) 5S rRNA binding (24.5%)" "IPR011035 (20%) IPR020056 (20%) IPR020930 (20%)" "Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (20%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (20%) Large ribosomal subunit protein uL5, bacteria (20%)" KVVINVFPSLDTSVCAASVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.11.1.24 (88.9%) 1.11.1.15 (11.1%)" "thioredoxin-dependent peroxiredoxin (88.9%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (11.1%)" GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" VRPAMDVNTNETCPTCFGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.1.26.- (50%) 3.1.4.- (50%)" "Endoribonucleases producing 5'-phosphomonoesters (50%) Phosphoric diester hydrolases (50%)" GO:0006364 (16.7%) GO:0005737 (16.7%) "GO:0003723 (16.7%) GO:0004540 (16.7%) GO:0016787 (16.7%)" rRNA processing (16.7%) cytoplasm (16.7%) "RNA binding (16.7%) RNA nuclease activity (16.7%) hydrolase activity (16.7%)" "IPR003029 (25%) IPR004659 (25%) IPR012340 (25%)" "S1 domain (25%) Ribonuclease E/G (25%) Nucleic acid-binding, OB-fold (25%)" AETHNFPTTVEPFNGASTGTGGEIRDR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19%) GO:0006164 (1.1%)" GO:0005737 (20.1%) "GO:0004642 (20.1%) GO:0005524 (19.7%) GO:0046872 (19.4%)" "'de novo' IMP biosynthetic process (19%) purine nucleotide biosynthetic process (1.1%)" cytoplasm (20.1%) "phosphoribosylformylglycinamidine synthase activity (20.1%) ATP binding (19.7%) metal ion binding (19.4%)" "IPR036921 (11.4%) IPR010918 (11.2%) IPR036676 (11.2%)" "PurM-like, N-terminal domain superfamily (11.4%) PurM-like, C-terminal domain (11.2%) PurM-like, C-terminal domain superfamily (11.2%)" VVDVLTPNYDVVTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0004019 (16.7%) GO:0005525 (16.7%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) adenylosuccinate synthase activity (16.7%) GTP binding (16.7%)" "IPR001114 (14.3%) IPR018220 (14.3%) IPR027417 (14.3%)" "Adenylosuccinate synthetase (14.3%) Adenylosuccinate synthase, GTP-binding site (14.3%) P-loop containing nucleoside triphosphate hydrolase (14.3%)" NIDKGIFPQAFCK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.3.1 (100%) phosphoribosylformylglycinamidine cyclo-ligase (100%) "GO:0006189 (16.7%) GO:0046084 (16.7%)" GO:0005829 (16.7%) "GO:0004637 (16.7%) GO:0004641 (16.7%) GO:0005524 (16.6%)" "'de novo' IMP biosynthetic process (16.7%) adenine biosynthetic process (16.7%)" cytosol (16.7%) "phosphoribosylamine-glycine ligase activity (16.7%) phosphoribosylformylglycinamidine cyclo-ligase activity (16.7%) ATP binding (16.6%)" "IPR036921 (20.1%) IPR004733 (20%) IPR016188 (20%)" "PurM-like, N-terminal domain superfamily (20.1%) Phosphoribosylformylglycinamidine cyclo-ligase (20%) PurM-like, N-terminal domain (20%)" NYLDHNDLFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.7%) GO:0006516 (19.7%)" GO:0005829 (19.7%) "GO:0000224 (19.7%) GO:0030246 (19.7%) GO:0016798 (1.3%)" "carbohydrate metabolic process (19.7%) glycoprotein catabolic process (19.7%)" cytosol (19.7%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.7%) carbohydrate binding (19.7%) hydrolase activity, acting on glycosyl bonds (1.3%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" AGFYVGHTEAICTGSLAGHNAAR Romboutsia ilealis Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Romboutsia Romboutsia ilealis "GO:0002098 (33.3%) GO:0030488 (33.3%)" GO:0050660 (33.3%) "tRNA wobble uridine modification (33.3%) tRNA methylation (33.3%)" flavin adenine dinucleotide binding (33.3%) "IPR002218 (33.3%) IPR036188 (33.3%) IPR040131 (33.3%)" "tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related (33.3%) FAD/NAD(P)-binding domain superfamily (33.3%) MnmG, N-terminal domain (33.3%)" GKGNVEYWVALIQPGK root "GO:0006412 (19.9%) GO:0002181 (0%) GO:0000027 (0%)" "GO:0022625 (19.9%) GO:0005840 (0.2%) GO:0005737 (0%)" "GO:0003735 (20%) GO:0019843 (20%) GO:0000049 (19.8%)" "translation (19.9%) cytoplasmic translation (0%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (19.9%) ribosome (0.2%) cytoplasm (0%)" "structural constituent of ribosome (20%) rRNA binding (20%) tRNA binding (19.8%)" "IPR000114 (19.9%) IPR016180 (19.9%) IPR047873 (19.9%)" "Large ribosomal subunit protein uL16, bacteria (19.9%) Large ribosomal subunit protein uL16 domain (19.9%) Large ribosomal subunit protein uL16 (19.9%)" IGRGPGSGLGGTSTR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (25.1%) "GO:0022625 (25.1%) GO:0005840 (0.1%)" "GO:0003735 (25.1%) GO:0019843 (24.7%)" translation (25.1%) "cytosolic large ribosomal subunit (25.1%) ribosome (0.1%)" "structural constituent of ribosome (25.1%) rRNA binding (24.7%)" "IPR005749 (20.2%) IPR036227 (20.2%) IPR021131 (20%)" "Large ribosomal subunit protein uL15, bacteria (20.2%) Large ribosomal subunit protein uL15/eL18 superfamily (20.2%) Large ribosomal subunit protein uL15/eL18 (20%)" ILSQFIEHSGRPVFSMEAATR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.1.3.11 (100%) N-succinylornithine carbamoyltransferase (100%) "GO:0019240 (25%) GO:0042450 (25%)" "GO:0004585 (25%) GO:0016597 (25%)" "citrulline biosynthetic process (25%) L-arginine biosynthetic process via ornithine (25%)" "ornithine carbamoyltransferase activity (25%) amino acid binding (25%)" "IPR006130 (20%) IPR006131 (20%) IPR006132 (20%)" "Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20%)" QLLHLMIHSLYSNKEIFLR root "GO:0006457 (0%) GO:0006974 (0%) GO:0009408 (0%)" "GO:0005737 (19.7%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0005524 (20%) GO:0016887 (20%) GO:0051082 (20%)" "protein folding (0%) DNA damage response (0%) response to heat (0%)" "cytoplasm (19.7%) cytosol (0%) plasma membrane (0%)" "ATP binding (20%) ATP hydrolysis activity (20%) unfolded protein binding (20%)" "IPR001404 (14.5%) IPR020575 (14.5%) IPR019805 (14.5%)" "Heat shock protein Hsp90 family (14.5%) Heat shock protein Hsp90, N-terminal (14.5%) Heat shock protein Hsp90, conserved site (14.5%)" LYQSYTGSPAEEITELPSSGSNRR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005524 (66.7%) GO:0016740 (33.3%)" "ATP binding (66.7%) transferase activity (33.3%)" "IPR002575 (25%) IPR005337 (25%) IPR011009 (25%)" "Aminoglycoside phosphotransferase (25%) RapZ-like family (25%) Protein kinase-like domain superfamily (25%)" KQAQEAVSAQATR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (26.7%) IPR005706 (26.7%) IPR023591 (26.7%)" "Small ribosomal subunit protein uS2 (26.7%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (26.7%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (26.7%)" QMKDVLGANACPVVIPIGAEESFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR027417 (6.6%) IPR000640 (6.2%) IPR000795 (6.2%)" "P-loop containing nucleoside triphosphate hydrolase (6.6%) Elongation factor EFG, domain V-like (6.2%) Translational (tr)-type GTP-binding domain (6.2%)" LVTDKDLSMSFLPMTHIFEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.2.1.3 (100%) long-chain-fatty-acid--CoA ligase (100%) GO:0016020 (50%) GO:0004467 (50%) membrane (50%) long-chain fatty acid-CoA ligase activity (50%) "IPR000873 (33.3%) IPR020845 (33.3%) IPR042099 (33.3%)" "AMP-dependent synthetase/ligase domain (33.3%) AMP-binding, conserved site (33.3%) ANL, N-terminal domain (33.3%)" YFDDPSTITEEEIMVAIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" MLIPTVDKFWR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.1%) IPR002933 (33.1%) IPR011650 (33.1%)" "Peptidase M20C, Xaa-His dipeptidase (33.1%) Peptidase M20 (33.1%) Peptidase M20, dimerisation domain (33.1%)" NALHLFPAPDSGWSPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.6.5.- (54.5%) 2.7.-.- (27.3%) 3.6.-.- (18.2%)" "Acting on GTP; involved in cellular and subcellular movement (54.5%) Transferring phosphorus-containing groups (27.3%) Acting on acid anhydrides (18.2%)" GO:0005737 (30.3%) "GO:0003924 (30.3%) GO:0005525 (30.3%) GO:0016301 (4.5%)" cytoplasm (30.3%) "GTPase activity (30.3%) GTP binding (30.3%) kinase activity (4.5%)" "IPR005129 (50%) IPR027417 (50%)" "SIMIBI class G3E GTPase, ArgK/MeaB (50%) P-loop containing nucleoside triphosphate hydrolase (50%)" HIALVAHDHCK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 4.2.3.3 (100%) methylglyoxal synthase (100%) "GO:0019242 (33.1%) GO:0034214 (0%)" GO:0005829 (33.1%) "GO:0008929 (33.2%) GO:0016829 (0.5%) GO:0042802 (0%)" "methylglyoxal biosynthetic process (33.1%) protein hexamerization (0%)" cytosol (33.1%) "methylglyoxal synthase activity (33.2%) lyase activity (0.5%) identical protein binding (0%)" "IPR036914 (25.2%) IPR004363 (25.1%) IPR011607 (24.9%)" "Methylglyoxal synthase-like domain superfamily (25.2%) Methylglyoxal synthase (25.1%) Methylglyoxal synthase-like domain (24.9%)" FMLSDGASAVLLQNQPGKEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) GO:0044550 (50%) "GO:0016746 (43.8%) GO:0033818 (6.3%)" secondary metabolite biosynthetic process (50%) "acyltransferase activity (43.8%) beta-ketoacyl-acyl-carrier-protein synthase III activity (6.3%)" "IPR013747 (50%) IPR016039 (50%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (50%) Thiolase-like (50%)" CITNISLFVPYAK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae GO:0016740 (100%) transferase activity (100%) "IPR011990 (50.8%) IPR019734 (44.1%) IPR013105 (5.1%)" "Tetratricopeptide-like helical domain superfamily (50.8%) Tetratricopeptide repeat (44.1%) Tetratricopeptide repeat 2 (5.1%)" EIYANLDFFKDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" IGIDGLWNVLEVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.103 (85.7%) 5.1.3.- (14.3%)" "L-threonine 3-dehydrogenase (85.7%) Acting on carbohydrates and derivatives (14.3%)" GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" EVKRDIDIMPFAITKADNGDAWVEVK Pasteurellaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae "GO:0005524 (34%) GO:0140662 (34%) GO:0051082 (32%)" "ATP binding (34%) ATP-dependent protein folding chaperone (34%) unfolded protein binding (32%)" "IPR013126 (17.3%) IPR043129 (17.3%) IPR012725 (16.3%)" "Heat shock protein 70 family (17.3%) ATPase, nucleotide binding domain (17.3%) Chaperone DnaK (16.3%)" LDDIASDGIELVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (16.9%) GO:0006098 (16.9%) GO:0042182 (15.4%)" GO:0005737 (16.9%) "GO:0004801 (16.9%) GO:0016832 (16.9%)" "carbohydrate metabolic process (16.9%) pentose-phosphate shunt (16.9%) ketone catabolic process (15.4%)" cytoplasm (16.9%) "transaldolase activity (16.9%) aldehyde-lyase activity (16.9%)" "IPR001585 (16.7%) IPR004731 (16.7%) IPR013785 (16.7%)" "Transaldolase/Fructose-6-phosphate aldolase (16.7%) Transaldolase type 3B/Fructose-6-phosphate aldolase (16.7%) Aldolase-type TIM barrel (16.7%)" VIVHVGSCCVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.3.3 (100%) N-acetylneuraminate lyase (100%) GO:0005737 (49.7%) "GO:0016829 (43.5%) GO:0008747 (6.8%)" cytoplasm (49.7%) "lyase activity (43.5%) N-acetylneuraminate lyase activity (6.8%)" "IPR002220 (50%) IPR013785 (50%)" "DapA-like (50%) Aldolase-type TIM barrel (50%)" LMNVTGDPIDGMAQLTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0005886 (22.2%) GO:0045259 (22.2%)" "GO:0005524 (22.2%) GO:0046933 (22.2%) GO:0016787 (8.3%)" "plasma membrane (22.2%) proton-transporting ATP synthase complex (22.2%)" "ATP binding (22.2%) proton-transporting ATP synthase activity, rotational mechanism (22.2%) hydrolase activity (8.3%)" "IPR000194 (10%) IPR003593 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" VEISSDSHPFYTGR Bacteria Bacteria GO:0006412 (24.9%) "GO:0005840 (25.3%) GO:1990904 (24.9%) GO:0016020 (0.1%)" GO:0003735 (24.9%) translation (24.9%) "ribosome (25.3%) ribonucleoprotein complex (24.9%) membrane (0.1%)" structural constituent of ribosome (24.9%) "IPR002150 (25%) IPR034704 (25%) IPR042105 (25%)" "Large ribosomal subunit protein bL31 type A/B (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%) Large ribosomal subunit protein bL31 superfamily (25%)" LGIVKPWNSTWFANTK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (19.9%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (19.9%) GO:0005840 (0.5%) GO:0005737 (0%)" "GO:0019843 (20%) GO:0003735 (19.9%) GO:0003729 (19.5%)" "translation (19.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (19.9%) ribosome (0.5%) cytoplasm (0%)" "rRNA binding (20%) structural constituent of ribosome (19.9%) mRNA binding (19.5%)" "IPR009019 (11.3%) IPR015946 (11.3%) IPR004044 (11.3%)" "K homology domain superfamily, prokaryotic type (11.3%) K homology domain-like, alpha/beta (11.3%) K Homology domain, type 2 (11.3%)" SNKQIYAQVIDDTTGK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR004389 (33.8%) IPR005484 (33.8%) IPR057268 (32.5%)" "Large ribosomal subunit protein uL18, bacteria (33.8%) Large ribosomal subunit protein uL18, bacterial/plantae/animalia (33.8%) Large ribosomal subunit protein uL18 (32.5%)" FQLATGQLENTAR Bacillota Bacteria Bacillati Bacillota GO:0006412 (33.2%) "GO:0022625 (33.2%) GO:0005840 (0.3%) GO:1990904 (0%)" GO:0003735 (33.2%) translation (33.2%) "cytosolic large ribosomal subunit (33.2%) ribosome (0.3%) ribonucleoprotein complex (0%)" structural constituent of ribosome (33.2%) "IPR001854 (25.2%) IPR050063 (25.2%) IPR036049 (25.2%)" "Large ribosomal subunit protein uL29 (25.2%) Universal ribosomal protein uL29 (25.2%) Large ribosomal subunit protein uL29 superfamily (25.2%)" DHTEAYELGENESHLCFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.4.1.5 (100%) lactoylglutathione lyase (100%) GO:0019243 (6.7%) GO:0005737 (6.7%) "GO:0016829 (33.3%) GO:0051213 (33.3%) GO:0004462 (20%)" methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (6.7%) cytoplasm (6.7%) "lyase activity (33.3%) dioxygenase activity (33.3%) lactoylglutathione lyase activity (20%)" "IPR004360 (27.7%) IPR029068 (27.7%) IPR037523 (27.7%)" "Glyoxalase/fosfomycin resistance/dioxygenase domain (27.7%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (27.7%) Vicinal oxygen chelate (VOC), core domain (27.7%)" RKWNPAMAPYIFMER Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (33.3%) "GO:0022627 (33.3%) GO:0005840 (0.2%)" GO:0003735 (33.3%) translation (33.3%) "cytosolic small ribosomal subunit (33.3%) ribosome (0.2%)" structural constituent of ribosome (33.3%) "IPR001865 (25.2%) IPR005706 (25.2%) IPR023591 (25.2%)" "Small ribosomal subunit protein uS2 (25.2%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.2%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.2%)" KKQDIGKPFVIALPGGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.4%) GO:0006044 (32.4%)" "GO:0004342 (32.4%) GO:0016853 (2.7%)" "carbohydrate metabolic process (32.4%) N-acetylglucosamine metabolic process (32.4%)" "glucosamine-6-phosphate deaminase activity (32.4%) isomerase activity (2.7%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" VTVDPENVTTTTLTVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005975 (50%) GO:0004553 (50%) carbohydrate metabolic process (50%) hydrolase activity, hydrolyzing O-glycosyl compounds (50%) "IPR013320 (45.8%) IPR013728 (45.8%) IPR006558 (8.3%)" "Concanavalin A-like lectin/glucanase domain superfamily (45.8%) BT_3987-like, N-terminal domain (45.8%) LamG-like jellyroll fold (8.3%)" NMFALLNKPGYEEESK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (19.8%) IPR018189 (19.8%) IPR035482 (19.8%)" "Phosphoglucose isomerase (PGI) (19.8%) Phosphoglucose isomerase, conserved site (19.8%) Phosphoglucose isomerase, SIS domain 2 (19.8%)" DLENNTIEVMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR004154 (11.3%) IPR004499 (11.3%) IPR036621 (11.3%)" "Anticodon-binding (11.3%) Proline-tRNA ligase, class IIa, archaeal-type (11.3%) Anticodon-binding domain superfamily (11.3%)" YVLTANAPETKDNDFTWK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0004825 (16.7%) GO:0005524 (16.7%) GO:0046872 (16.6%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "methionine-tRNA ligase activity (16.7%) ATP binding (16.7%) metal ion binding (16.6%)" "IPR015413 (8.4%) IPR023458 (8.4%) IPR014729 (8.4%)" "Methionyl/Leucyl tRNA synthetase (8.4%) Methionine-tRNA ligase, type 1 (8.4%) Rossmann-like alpha/beta/alpha sandwich fold (8.4%)" VIEKTDEYLLCEVQNEATLGNRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (16.7%) "GO:0000287 (16.7%) GO:0004743 (16.7%) GO:0005524 (16.7%)" response to stress (16.7%) "magnesium ion binding (16.7%) pyruvate kinase activity (16.7%) ATP binding (16.7%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" TLAEGQNVEFEIQDGQK root "GO:0010468 (0.2%) GO:0000917 (0.1%) GO:0006508 (0.1%)" "GO:0005829 (48.7%) GO:0005737 (0.4%) GO:0005886 (0.1%)" "GO:0003677 (28.4%) GO:0003676 (21%) GO:0001072 (0.1%)" "regulation of gene expression (0.2%) division septum assembly (0.1%) proteolysis (0.1%)" "cytosol (48.7%) cytoplasm (0.4%) plasma membrane (0.1%)" "DNA binding (28.4%) nucleic acid binding (21%) transcription antitermination factor activity, RNA binding (0.1%)" "IPR002059 (16.7%) IPR012340 (16.7%) IPR050181 (16.6%)" "Cold-shock protein Csp, DNA-binding (16.7%) Nucleic acid-binding, OB-fold (16.7%) Cold shock domain-containing protein (16.6%)" LIKVEDIIAPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005829 (33.3%) "GO:0003677 (33.3%) GO:0003700 (33.3%)" cytosol (33.3%) "DNA binding (33.3%) DNA-binding transcription factor activity (33.3%)" "IPR000595 (16.7%) IPR012318 (16.7%) IPR014710 (16.7%)" "Cyclic nucleotide-binding domain (16.7%) Crp-type HTH domain (16.7%) RmlC-like jelly roll fold (16.7%)" AQAIIENCAHPDYK Bacteria Bacteria "2.8.3.- (94.7%) 3.1.2.1 (5.3%)" "CoA-transferases (94.7%) acetyl-CoA hydrolase (5.3%)" "GO:0006083 (25.1%) GO:0006084 (24.6%)" "GO:0003986 (25.1%) GO:0008775 (25.1%)" "acetate metabolic process (25.1%) acetyl-CoA metabolic process (24.6%)" "acetyl-CoA hydrolase activity (25.1%) acetate CoA-transferase activity (25.1%)" "IPR026888 (16.8%) IPR037171 (16.8%) IPR038460 (16.8%)" "Acetyl-CoA hydrolase/transferase, C-terminal domain (16.8%) NagB/RpiA transferase-like (16.8%) Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily (16.8%)" TKKEDDDALNANVAGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" MAHMPAELFR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.5.2.3 (81.8%) 3.5.2.5 (18.2%)" "dihydroorotase (81.8%) allantoinase (18.2%)" GO:0006145 (21.4%) GO:0005737 (21.4%) "GO:0004038 (21.4%) GO:0046872 (21.4%) GO:0004151 (14.3%)" purine nucleobase catabolic process (21.4%) cytoplasm (21.4%) "allantoinase activity (21.4%) metal ion binding (21.4%) dihydroorotase activity (14.3%)" "IPR002195 (20%) IPR006680 (20%) IPR011059 (20%)" "Dihydroorotase, conserved site (20%) Amidohydrolase-related (20%) Metal-dependent hydrolase, composite domain superfamily (20%)" TQEVFMAMPEVSGMEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" ATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDR Bacteria Bacteria "GO:0034220 (17.8%) GO:0006811 (6.8%) GO:0006974 (0.1%)" "GO:0009279 (24.7%) GO:0046930 (24.7%) GO:0016020 (0.1%)" "GO:0015288 (24.7%) GO:0015075 (0.1%) GO:0042802 (0.1%)" "monoatomic ion transmembrane transport (17.8%) monoatomic ion transport (6.8%) DNA damage response (0.1%)" "cell outer membrane (24.7%) pore complex (24.7%) membrane (0.1%)" "porin activity (24.7%) monoatomic ion transmembrane transporter activity (0.1%) identical protein binding (0.1%)" "IPR002368 (12.9%) IPR006664 (12.9%) IPR006665 (12.9%)" "Outer membrane protein, OmpA (12.9%) Outer membrane protein, bacterial (12.9%) OmpA-like domain (12.9%)" TLALLQAELPLKK root "2.1.1.198 (99.9%) 2.1.1.- (0.1%)" "16S rRNA (cytidine(1402)-2'-O)-methyltransferase (99.9%) Methyltransferases (0.1%)" "GO:0032259 (3%) GO:0006364 (1%)" GO:0005737 (46.9%) "GO:0070677 (46%) GO:0008168 (3.1%) GO:0042803 (0.1%)" "methylation (3%) rRNA processing (1%)" cytoplasm (46.9%) "rRNA (cytosine-2'-O-)-methyltransferase activity (46%) methyltransferase activity (3.1%) protein homodimerization activity (0.1%)" "IPR053910 (14.5%) IPR014776 (14.4%) IPR008189 (14.3%)" "RsmI, HTH domain (14.5%) Tetrapyrrole methylase, subdomain 2 (14.4%) rRNA small subunit methyltransferase I (14.3%)" HANLPVLVVR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006950 (14.3%) GO:1902021 (14.3%)" GO:0005737 (14.3%) "GO:0004017 (14.3%) GO:0004672 (14.3%) GO:0042803 (14.3%)" "response to stress (14.3%) regulation of bacterial-type flagellum-dependent cell motility (14.3%)" cytoplasm (14.3%) "AMP kinase activity (14.3%) protein kinase activity (14.3%) protein homodimerization activity (14.3%)" "IPR006015 (33.3%) IPR006016 (33.3%) IPR014729 (33.3%)" "Universal stress protein A family (33.3%) UspA (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (33.3%)" FCPVNEIPDGWEGLDIGPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" ILGEALADFIAFSSPEAIILFGGLAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (69.2%) GO:0004340 (30.8%)" "kinase activity (69.2%) glucokinase activity (30.8%)" "IPR000600 (33.7%) IPR049874 (33.7%) IPR043129 (32.7%)" "ROK family (33.7%) ROK, conserved site (33.7%) ATPase, nucleotide binding domain (32.7%)" KANVIAGEAGGITQHIGAYNVK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0005737 (24.9%) "GO:0003743 (24.9%) GO:0003924 (24.9%) GO:0005525 (24.9%)" cytoplasm (24.9%) "translation initiation factor activity (24.9%) GTPase activity (24.9%) GTP binding (24.9%)" "IPR000178 (9.1%) IPR000795 (9.1%) IPR005225 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translational (tr)-type GTP-binding domain (9.1%) Small GTP-binding domain (9.1%)" ARVPFMNFFDGFR Pseudomonadati Bacteria Pseudomonadati "1.2.7.1 (68.8%) 1.2.7.- (31.3%)" "pyruvate synthase (68.8%) With an iron-sulfur protein as acceptor (31.3%)" "GO:0006979 (15.1%) GO:0022900 (15.1%) GO:0044281 (9.7%)" "GO:0005506 (15.1%) GO:0051539 (15.1%) GO:0030976 (13.9%)" "response to oxidative stress (15.1%) electron transport chain (15.1%) small molecule metabolic process (9.7%)" "iron ion binding (15.1%) 4 iron, 4 sulfur cluster binding (15.1%) thiamine pyrophosphate binding (13.9%)" "IPR002869 (7.8%) IPR002880 (7.8%) IPR009014 (7.8%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.8%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.8%)" LGRKPLWCGDTGPEVVQR root "GO:0006281 (28.2%) GO:0005975 (0.3%) GO:0010212 (0.3%)" "GO:0005737 (31.4%) GO:0005829 (0.3%) GO:0060187 (0.3%)" "GO:0046872 (31.7%) GO:0016787 (6.5%) GO:0005524 (0.3%)" "DNA repair (28.2%) carbohydrate metabolic process (0.3%) response to ionizing radiation (0.3%)" "cytoplasm (31.4%) cytosol (0.3%) cell pole (0.3%)" "metal ion binding (31.7%) hydrolase activity (6.5%) ATP binding (0.3%)" "IPR002678 (48.1%) IPR036069 (48.1%) IPR003778 (0.5%)" "DUF34/NIF3 (48.1%) DUF34/NIF3 superfamily (48.1%) Carboxyltransferase domain, subdomain A and B (0.5%)" YTAQDWEGFKELVSASNLQDKDLVLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (51.4%) IPR019734 (48.6%)" "Tetratricopeptide-like helical domain superfamily (51.4%) Tetratricopeptide repeat (48.6%)" AVIGVGAENCADK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" RANAVTEVFVNK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006811 (25%) "GO:0009279 (25%) GO:0046930 (25%)" GO:0015288 (25%) monoatomic ion transport (25%) "cell outer membrane (25%) pore complex (25%)" porin activity (25%) "IPR006664 (19.6%) IPR006665 (19.6%) IPR011250 (19.6%)" "Outer membrane protein, bacterial (19.6%) OmpA-like domain (19.6%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (19.6%)" MVFFDELKDR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR002931 (36.5%) IPR038765 (36.5%) IPR008969 (27%)" "Transglutaminase-like (36.5%) Papain-like cysteine peptidase superfamily (36.5%) Carboxypeptidase-like, regulatory domain superfamily (27%)" IHGVNYSISSACATSAHCIGNAVEQIQLGK root 2.3.1.41 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase I (100%) "GO:0006633 (33.1%) GO:1903966 (0.1%)" "GO:0005829 (33.1%) GO:0016020 (0.1%)" "GO:0004315 (33.1%) GO:0016746 (0.4%) GO:0022857 (0.1%)" "fatty acid biosynthetic process (33.1%) monounsaturated fatty acid biosynthetic process (0.1%)" "cytosol (33.1%) membrane (0.1%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (33.1%) acyltransferase activity (0.4%) transmembrane transporter activity (0.1%)" "IPR000794 (16.8%) IPR014030 (16.8%) IPR016039 (16.8%)" "Beta-ketoacyl synthase (16.8%) Beta-ketoacyl synthase-like, N-terminal (16.8%) Thiolase-like (16.8%)" TIPYEILTSISPR Bacteroidota Bacteria Pseudomonadati Bacteroidota 5.1.1.1 (100%) alanine racemase (100%) GO:0030632 (19.9%) GO:0005829 (3.7%) "GO:0008784 (19.9%) GO:0030170 (19.9%) GO:0005524 (18.3%)" D-alanine biosynthetic process (19.9%) cytosol (3.7%) "alanine racemase activity (19.9%) pyridoxal phosphate binding (19.9%) ATP binding (18.3%)" "IPR000821 (10.6%) IPR009006 (10.6%) IPR011079 (10.6%)" "Alanine racemase (10.6%) Alanine racemase/group IV decarboxylase, C-terminal (10.6%) Alanine racemase, C-terminal (10.6%)" DIIKNNPDSFR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae "4.1.2.- (83.1%) 4.1.2.22 (10.8%) 4.1.2.9 (6.2%)" "Aldehyde-lyases (83.1%) fructose-6-phosphate phosphoketolase (10.8%) phosphoketolase (6.2%)" GO:0005975 (33%) "GO:0000287 (33%) GO:0016832 (30.4%) GO:0047905 (2.3%)" carbohydrate metabolic process (33%) "magnesium ion binding (33%) aldehyde-lyase activity (30.4%) fructose-6-phosphate phosphoketolase activity (2.3%)" "IPR005593 (15.1%) IPR029061 (15.1%) IPR009014 (12.4%)" "Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase (15.1%) Thiamin diphosphate-binding fold (15.1%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.4%)" IGAGPIPIETSEGWLLIYHGVLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0016757 (66.7%) GO:0016798 (26.7%) GO:0016787 (6.7%)" "glycosyltransferase activity (66.7%) hydrolase activity, acting on glycosyl bonds (26.7%) hydrolase activity (6.7%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" FGQVDAIAGVATGAIPQGALVADALNLPFVYVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25.1%) GO:0044205 (25.1%) GO:0006222 (0.3%)" "GO:0004588 (25.1%) GO:0000287 (24.2%) GO:0016757 (0.3%)" "pyrimidine nucleobase biosynthetic process (25.1%) 'de novo' UMP biosynthetic process (25.1%) UMP biosynthetic process (0.3%)" "orotate phosphoribosyltransferase activity (25.1%) magnesium ion binding (24.2%) glycosyltransferase activity (0.3%)" "IPR000836 (25%) IPR004467 (25%) IPR023031 (25%)" "Phosphoribosyltransferase domain (25%) Orotate phosphoribosyl transferase domain (25%) Orotate phosphoribosyltransferase (25%)" TGNEAQISIDSNSKPDYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.86 (98.3%) 1.1.1.- (1.7%)" "ketol-acid reductoisomerase (NADP(+)) (98.3%) With NAD(+) or NADP(+) as acceptor (1.7%)" "GO:0009097 (21%) GO:0009099 (21%)" GO:0070013 (0.7%) "GO:0004455 (21%) GO:0046872 (20.3%) GO:0016853 (16%)" "isoleucine biosynthetic process (21%) L-valine biosynthetic process (21%)" intracellular organelle lumen (0.7%) "ketol-acid reductoisomerase activity (21%) metal ion binding (20.3%) isomerase activity (16%)" "IPR000506 (17%) IPR008927 (17%) IPR013328 (17%)" "Ketol-acid reductoisomerase, C-terminal (17%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (17%) 6-phosphogluconate dehydrogenase, domain 2 (17%)" VILPDPVFNDQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (20.2%) GO:0000028 (0.2%)" "GO:0015935 (20%) GO:0005840 (0.2%) GO:0022627 (0.2%)" "GO:0003735 (20.2%) GO:0019843 (20.2%) GO:0000049 (18.7%)" "translation (20.2%) ribosomal small subunit assembly (0.2%)" "small ribosomal subunit (20%) ribosome (0.2%) cytosolic small ribosomal subunit (0.2%)" "structural constituent of ribosome (20.2%) rRNA binding (20.2%) tRNA binding (18.7%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" GRYAVGQGPMWVVVNAH Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 3.1.1.31 (100%) 6-phosphogluconolactonase (100%) "GO:0006006 (25.1%) GO:0009051 (23.1%) GO:0006098 (0.2%)" GO:0005829 (25.2%) "GO:0017057 (25.2%) GO:0016787 (0.9%) GO:0016853 (0.2%)" "glucose metabolic process (25.1%) pentose-phosphate shunt, oxidative branch (23.1%) pentose-phosphate shunt (0.2%)" cytosol (25.2%) "6-phosphogluconolactonase activity (25.2%) hydrolase activity (0.9%) isomerase activity (0.2%)" "IPR019405 (20.3%) IPR050282 (20.3%) IPR015943 (20.2%)" "Lactonase, 7-bladed beta-propeller (20.3%) Cycloisomerase 2 (20.3%) WD40/YVTN repeat-like-containing domain superfamily (20.2%)" SAQEYFTDGITASVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (51.2%) IPR041662 (48.8%)" "Tetratricopeptide-like helical domain superfamily (51.2%) SusD-like 2 (48.8%)" TFVKRDPQEAER root "GO:0006413 (0.1%) GO:0009409 (0%) GO:0061077 (0%)" "GO:0005829 (19.9%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0003743 (21.1%) GO:0005525 (19.9%) GO:0003924 (19.8%)" "translational initiation (0.1%) response to cold (0%) obsolete chaperone-mediated protein folding (0%)" "cytosol (19.9%) cytoplasm (0.1%) membrane (0%)" "translation initiation factor activity (21.1%) GTP binding (19.9%) GTPase activity (19.8%)" "IPR013575 (7.5%) IPR006847 (7.4%) IPR009061 (7.4%)" "Initiation factor 2 associated domain, bacterial (7.5%) Translation initiation factor IF-2, N-terminal (7.4%) Putative DNA-binding domain superfamily (7.4%)" ATTDKAEAVAMYPGVQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0005829 (18.7%) GO:0015935 (18.7%) GO:0005840 (1.3%)" "GO:0003735 (20%) GO:0070181 (18.7%) GO:0019843 (1.3%)" translation (20%) "cytosol (18.7%) small ribosomal subunit (18.7%) ribosome (1.3%)" "structural constituent of ribosome (20%) small ribosomal subunit rRNA binding (18.7%) rRNA binding (1.3%)" "IPR002583 (50%) IPR036510 (50%)" "Small ribosomal subunit protein bS20 (50%) Small ribosomal subunit protein bS20 superfamily (50%)" NILPVLLEARK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.1.1 (100%) asparaginase (100%) GO:0006528 (33.3%) "GO:0042597 (31%) GO:0030313 (2.4%)" GO:0004067 (33.3%) asparagine metabolic process (33.3%) "periplasmic space (31%) cell envelope (2.4%)" asparaginase activity (33.3%) "IPR004550 (11.3%) IPR006034 (11.3%) IPR027473 (11.3%)" "L-asparaginase, type II (11.3%) Asparaginase/glutaminase-like (11.3%) L-asparaginase, C-terminal (11.3%)" VVIIEDLVSTGGSSLK Bacteria Bacteria 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (26.6%) GO:0044205 (26.6%)" "GO:0004588 (26.6%) GO:0000287 (20.2%)" "pyrimidine nucleobase biosynthetic process (26.6%) 'de novo' UMP biosynthetic process (26.6%)" "orotate phosphoribosyltransferase activity (26.6%) magnesium ion binding (20.2%)" "IPR000836 (25.2%) IPR023031 (25.2%) IPR029057 (25.2%)" "Phosphoribosyltransferase domain (25.2%) Orotate phosphoribosyltransferase (25.2%) Phosphoribosyltransferase-like (25.2%)" VVGQDDAVQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0034605 (19.7%) GO:0006508 (10.6%)" GO:0005737 (19.7%) "GO:0005524 (19.7%) GO:0016887 (19.7%) GO:0008233 (10.6%)" "cellular response to heat (19.7%) proteolysis (10.6%)" cytoplasm (19.7%) "ATP binding (19.7%) ATP hydrolysis activity (19.7%) peptidase activity (10.6%)" "IPR001270 (8.8%) IPR003593 (8.8%) IPR003959 (8.8%)" "ClpA/B family (8.8%) AAA+ ATPase domain (8.8%) ATPase, AAA-type, core (8.8%)" YLIELINSKADVDDIDHLSNRR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (19.9%) GO:0000428 (20.1%) "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (19.9%)" DNA-templated transcription (19.9%) DNA-directed RNA polymerase complex (20.1%) "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (19.9%)" "IPR007642 (7.8%) IPR007645 (7.8%) IPR015712 (7.8%)" "RNA polymerase Rpb2, domain 2 (7.8%) RNA polymerase Rpb2, domain 3 (7.8%) DNA-directed RNA polymerase, subunit 2 (7.8%)" KKVEELAEILQANGINAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.6.2.4 (94.2%) 3.6.4.12 (3.8%) 3.6.1.- (1.9%)" "DNA 3'-5' helicase (94.2%) DNA helicase (3.8%) In phosphorus-containing anhydrides (1.9%)" "GO:0006260 (8.3%) GO:0006281 (8.3%) GO:0006310 (8.3%)" "GO:0005737 (8.3%) GO:0030894 (8.3%) GO:0043590 (8.3%)" "GO:0016787 (8.4%) GO:0003677 (8.3%) GO:0009378 (8.3%)" "DNA replication (8.3%) DNA repair (8.3%) DNA recombination (8.3%)" "cytoplasm (8.3%) replisome (8.3%) bacterial nucleoid (8.3%)" "hydrolase activity (8.4%) DNA binding (8.3%) four-way junction helicase activity (8.3%)" "IPR001650 (7.2%) IPR002121 (7.2%) IPR004589 (7.2%)" "Helicase, C-terminal domain-like (7.2%) HRDC domain (7.2%) DNA helicase, ATP-dependent, RecQ type (7.2%)" DVAVVGCSVDSEYSHFSWLQMPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" ALGQNVLTSVKPSQLMVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) "GO:0048500 (18.6%) GO:0005786 (1.4%)" "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (20%)" SRP-dependent cotranslational protein targeting to membrane (20%) "signal recognition particle (18.6%) signal recognition particle, endoplasmic reticulum targeting (1.4%)" "GTPase activity (20%) GTP binding (20%) 7S RNA binding (20%)" "IPR000897 (11.1%) IPR003593 (11.1%) IPR004125 (11.1%)" "Signal recognition particle, SRP54 subunit, GTPase domain (11.1%) AAA+ ATPase domain (11.1%) Signal recognition particle, SRP54 subunit, M-domain (11.1%)" FLLHYNFPPYSTGEAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.4%) GO:0006402 (14.4%)" GO:0005829 (14.4%) "GO:0000175 (14.4%) GO:0003723 (14.4%) GO:0004654 (14.4%)" "RNA processing (14.4%) mRNA catabolic process (14.4%)" cytosol (14.4%) "3'-5'-RNA exonuclease activity (14.4%) RNA binding (14.4%) polyribonucleotide nucleotidyltransferase activity (14.4%)" "IPR001247 (7.9%) IPR012162 (7.9%) IPR015847 (7.9%)" "Exoribonuclease, phosphorolytic domain 1 (7.9%) Polyribonucleotide nucleotidyltransferase (7.9%) Exoribonuclease, phosphorolytic domain 2 (7.9%)" VAMQDATAQMALLQFMNAGK Pseudomonadati Bacteria Pseudomonadati 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) "GO:0005829 (20%) GO:0005739 (0.1%)" "GO:0003994 (20%) GO:0051539 (20%) GO:0046872 (19.9%)" tricarboxylic acid cycle (20%) "cytosol (20%) mitochondrion (0.1%)" "aconitate hydratase activity (20%) 4 iron, 4 sulfur cluster binding (20%) metal ion binding (19.9%)" "IPR001030 (11.2%) IPR050926 (11.2%) IPR015931 (11.2%)" "Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.2%) Aconitase/IPM Isomerase (11.2%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (11.2%)" ESVPDCYADLGYR Pseudomonadati Bacteria Pseudomonadati 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20.3%) GO:0009263 (17.9%)" "GO:0004748 (20.6%) GO:0031419 (20.6%) GO:0005524 (17.9%)" "DNA biosynthetic process (20.3%) deoxyribonucleotide biosynthetic process (17.9%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.6%) cobalamin binding (20.6%) ATP binding (17.9%)" "IPR000788 (25.8%) IPR013344 (25.8%) IPR050862 (25.8%)" "Ribonucleotide reductase large subunit, C-terminal (25.8%) Ribonucleotide reductase, adenosylcobalamin-dependent (25.8%) Ribonucleoside diphosphate reductase class-2 (25.8%)" SKGFGFVEMPNDEEGNAAIAALNEKEIDGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0003723 (100%) RNA binding (100%) "IPR000504 (20%) IPR012677 (20%) IPR035979 (20%)" "RNA recognition motif domain (20%) Nucleotide-binding alpha-beta plait domain superfamily (20%) RNA-binding domain superfamily (20%)" EGDVVIFFNYR Bacteroidota Bacteria Pseudomonadati Bacteroidota "5.4.2.12 (99.7%) 5.4.2.1 (0.3%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (99.7%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.3%)" "GO:0006007 (20%) GO:0006096 (20%) GO:0005975 (0.1%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%) GO:0016853 (0.2%)" "glucose catabolic process (20%) glycolytic process (20%) carbohydrate metabolic process (0.1%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%) isomerase activity (0.2%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" AVEEGASITLSNTPVAVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" CVGILTSGGDAPGMNAAIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0016208 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) AMP binding (9.1%)" "IPR000023 (16.7%) IPR012003 (16.7%) IPR012828 (16.7%)" "Phosphofructokinase domain (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic (16.7%)" NVVLIDDIVDTAGTITK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0016301 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) kinase activity (11.1%)" "IPR000836 (20%) IPR005946 (20%) IPR029057 (20%)" "Phosphoribosyltransferase domain (20%) Ribose-phosphate pyrophosphokinase (20%) Phosphoribosyltransferase-like (20%)" KLQEFASYNDNLEEVFENR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (25.1%) GO:0000428 (24.7%) "GO:0003677 (25.1%) GO:0003899 (25.1%)" DNA-templated transcription (25.1%) DNA-directed RNA polymerase complex (24.7%) "DNA binding (25.1%) DNA-directed RNA polymerase activity (25.1%)" "IPR006110 (63.9%) IPR036161 (36.1%)" "RNA polymerase, subunit omega/Rpo6/RPB6 (63.9%) RPB6/omega subunit-like superfamily (36.1%)" GIDEFYAQCEK Bacteria Bacteria 4.2.1.20 (100%) tryptophan synthase (100%) "GO:0000162 (0.2%) GO:0009073 (0.2%)" "GO:0005829 (48.8%) GO:0005737 (0.2%)" "GO:0004834 (49%) GO:0016829 (1.4%) GO:0060090 (0.2%)" "L-tryptophan biosynthetic process (0.2%) aromatic amino acid family biosynthetic process (0.2%)" "cytosol (48.8%) cytoplasm (0.2%)" "tryptophan synthase activity (49%) lyase activity (1.4%) molecular adaptor activity (0.2%)" "IPR002028 (25.1%) IPR011060 (25.1%) IPR013785 (25.1%)" "Tryptophan synthase, alpha chain (25.1%) Ribulose-phosphate binding barrel (25.1%) Aldolase-type TIM barrel (25.1%)" VGSILEEDNQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.4.24.- (60%) 3.4.24.55 (40%)" "Metalloendopeptidases (60%) pitrilysin (40%)" GO:0006508 (33.5%) "GO:0004222 (33%) GO:0046872 (33%) GO:0008233 (0.5%)" proteolysis (33.5%) "metalloendopeptidase activity (33%) metal ion binding (33%) peptidase activity (0.5%)" "IPR011765 (20.2%) IPR001431 (19.9%) IPR007863 (19.9%)" "Peptidase M16, N-terminal (20.2%) Peptidase M16, zinc-binding site (19.9%) Peptidase M16, C-terminal (19.9%)" NKYTLIDFWASWCGPCRK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0017004 (26.7%) GO:0030313 (26.7%) "GO:0016209 (23.3%) GO:0016491 (23.3%)" cytochrome complex assembly (26.7%) cell envelope (26.7%) "antioxidant activity (23.3%) oxidoreductase activity (23.3%)" "IPR013766 (16.8%) IPR017937 (16.8%) IPR036249 (16.8%)" "Thioredoxin domain (16.8%) Thioredoxin, conserved site (16.8%) Thioredoxin-like superfamily (16.8%)" ACGISGYLLGVNPFNQPGVEAYKK Bacteria Bacteria 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.2%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.2%)" "IPR001672 (19.9%) IPR018189 (19.9%) IPR035482 (19.9%)" "Phosphoglucose isomerase (PGI) (19.9%) Phosphoglucose isomerase, conserved site (19.9%) Phosphoglucose isomerase, SIS domain 2 (19.9%)" HSSGGGSRGGSSSGGGYGSGGGGSSSVK Simiiformes Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Euarchontoglires Primates Haplorrhini Simiiformes "GO:0031424 (8.4%) GO:0045109 (8.4%) GO:0003334 (5.3%)" "GO:0005829 (11.5%) GO:0045095 (9.9%) GO:0005615 (7.6%)" "GO:0030280 (8.4%) GO:0008092 (5.3%) GO:0005200 (0.8%)" "keratinization (8.4%) intermediate filament organization (8.4%) keratinocyte development (5.3%)" "cytosol (11.5%) keratin filament (9.9%) extracellular space (7.6%)" "structural constituent of skin epidermis (8.4%) cytoskeletal protein binding (5.3%) structural constituent of cytoskeleton (0.8%)" "IPR018039 (26.3%) IPR039008 (26.3%) IPR032444 (24.6%)" "Intermediate filament protein, conserved site (26.3%) Intermediate filament, rod domain (26.3%) Keratin type II head (24.6%)" ADPNTPIEVVAETVNELIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0005737 (50%) GO:0016020 (43.8%)" GO:0016491 (6.3%) "cytoplasm (50%) membrane (43.8%)" oxidoreductase activity (6.3%) "IPR006311 (25%) IPR023210 (25%) IPR036812 (25%)" "Twin-arginine translocation pathway, signal sequence (25%) NADP-dependent oxidoreductase domain (25%) NAD(P)-dependent oxidoreductase domain superfamily (25%)" NIPDELIPIAHHWLILHGR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.2.99.18 (100%) DNA-(apurinic or apyrimidinic site) lyase (100%) GO:0006285 (16.2%) "GO:0003677 (16.2%) GO:0019104 (16.2%) GO:0046872 (16.2%)" base-excision repair, AP site formation (16.2%) "DNA binding (16.2%) DNA N-glycosylase activity (16.2%) metal ion binding (16.2%)" "IPR000445 (16.7%) IPR003265 (16.7%) IPR003651 (16.7%)" "Helix-hairpin-helix motif (16.7%) HhH-GPD domain (16.7%) Endonuclease III-like, iron-sulphur cluster loop motif (16.7%)" ALVSVFHKDGLDEILK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (22.2%) IPR011607 (22.2%) IPR036914 (22.2%)" "Bifunctional purine biosynthesis protein PurH-like (22.2%) Methylglyoxal synthase-like domain (22.2%) Methylglyoxal synthase-like domain superfamily (22.2%)" SMSGVDSPEDIERAEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.7.7.38 (100%) 3-deoxy-manno-octulosonate cytidylyltransferase (100%) GO:0009103 (33.3%) GO:0005829 (33.3%) GO:0008690 (33.3%) lipopolysaccharide biosynthetic process (33.3%) cytosol (33.3%) 3-deoxy-manno-octulosonate cytidylyltransferase activity (33.3%) "IPR003329 (33.3%) IPR004528 (33.3%) IPR029044 (33.3%)" "Acylneuraminate cytidylyltransferase (33.3%) 3-deoxy-D-manno-octulosonate cytidylyltransferase (33.3%) Nucleotide-diphospho-sugar transferases (33.3%)" AMAGCPVTVR Pseudomonadati Bacteria Pseudomonadati 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" IPTDIYESVEEGANHIACEIAQVIRDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (31.1%) GO:0006044 (31.1%)" "GO:0004342 (31.1%) GO:0016853 (6.6%)" "carbohydrate metabolic process (31.1%) N-acetylglucosamine metabolic process (31.1%)" "glucosamine-6-phosphate deaminase activity (31.1%) isomerase activity (6.6%)" "IPR003737 (14.3%) IPR004547 (14.3%) IPR006148 (14.3%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.3%) Glucosamine-6-phosphate isomerase (14.3%) Glucosamine/galactosamine-6-phosphate isomerase (14.3%)" YMPELEAYFHYR root "3.1.-.- (97.9%) 3.1.15.- (2.1%)" "Acting on ester bonds (97.9%) Exonucleases active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters (2.1%)" "GO:0006259 (24.9%) GO:0006401 (0%)" "GO:0005737 (24.5%) GO:0005829 (0.1%) GO:0016020 (0%)" "GO:0000175 (25%) GO:0003676 (25%) GO:0016787 (0.2%)" "DNA metabolic process (24.9%) RNA catabolic process (0%)" "cytoplasm (24.5%) cytosol (0.1%) membrane (0%)" "3'-5'-RNA exonuclease activity (25%) nucleic acid binding (25%) hydrolase activity (0.2%)" "IPR013520 (25%) IPR022894 (25%) IPR012337 (24.9%)" "Ribonuclease H-like domain (25%) Oligoribonuclease (25%) Ribonuclease H-like superfamily (24.9%)" TVWTDPINAQEFAAGLIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0000166 (100%) nucleotide binding (100%) "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" GMVHDMMPGTEELLAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.9%) GO:0005829 (16.9%) "GO:0003723 (16.9%) GO:0004831 (16.9%) GO:0005524 (16.9%)" tyrosyl-tRNA aminoacylation (16.9%) cytosol (16.9%) "RNA binding (16.9%) tyrosine-tRNA ligase activity (16.9%) ATP binding (16.9%)" "IPR001412 (12.5%) IPR002305 (12.5%) IPR002307 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Aminoacyl-tRNA synthetase, class Ic (12.5%) Tyrosine-tRNA ligase (12.5%)" AQAPTTASGDPVVTRPAASTTQGAVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.1.70 (100%) Transferred entry: 7.2.4.5 (100%) GO:0016829 (100%) lyase activity (100%) "IPR000089 (25%) IPR001882 (25%) IPR011053 (25%)" "Biotin/lipoyl attachment (25%) Biotin-binding site (25%) Single hybrid motif (25%)" GTDYREIEIDGQYCKAPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0051539 (100%) 4 iron, 4 sulfur cluster binding (100%) "IPR007160 (33.3%) IPR017896 (33.3%) IPR050157 (33.3%)" "Domain of unknown function DUF362 (33.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (33.3%) Photosystem I iron-sulfur center (33.3%)" LHILGVMEQAINAPR root 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.4%) GO:0006396 (13.8%) GO:0006401 (0%)" "GO:0005829 (14.4%) GO:0016020 (0%) GO:1990061 (0%)" "GO:0000175 (14.4%) GO:0003723 (14.4%) GO:0004654 (14.4%)" "mRNA catabolic process (14.4%) RNA processing (13.8%) RNA catabolic process (0%)" "cytosol (14.4%) membrane (0%) bacterial degradosome (0%)" "3'-5'-RNA exonuclease activity (14.4%) RNA binding (14.4%) polyribonucleotide nucleotidyltransferase activity (14.4%)" "IPR012162 (7.8%) IPR027408 (7.8%) IPR036345 (7.8%)" "Polyribonucleotide nucleotidyltransferase (7.8%) PNPase/RNase PH domain superfamily (7.8%) Exoribonuclease, PH domain 2 superfamily (7.8%)" VDGKPLTELIGTDALTKDQWAEIQTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (37.5%) "GO:0016615 (25%) GO:0016616 (25%) GO:0030060 (12.5%)" malate metabolic process (37.5%) "malate dehydrogenase activity (25%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (25%) L-malate dehydrogenase (NAD+) activity (12.5%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" AKLPNEEKTALEIWKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (22.1%) GO:0015935 (22.1%) "GO:0003735 (22.1%) GO:0019843 (22.1%) GO:0000049 (11.7%)" translation (22.1%) small ribosomal subunit (22.1%) "structural constituent of ribosome (22.1%) rRNA binding (22.1%) tRNA binding (11.7%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" YFTTQADATHFSGCK Pseudomonadati Bacteria Pseudomonadati "3.2.1.22 (68%) 3.2.1.- (16%) 3.2.1.0 (16%)" "alpha-galactosidase (68%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (16%) Unknown (16%)" GO:0005886 (1%) "GO:0004557 (65.6%) GO:0016798 (33.3%)" plasma membrane (1%) "alpha-galactosidase activity (65.6%) hydrolase activity, acting on glycosyl bonds (33.3%)" "IPR011050 (24.9%) IPR012334 (24.9%) IPR056441 (24.7%)" "Pectin lyase fold/virulence factor (24.9%) Pectin lyase fold (24.9%) GLAA-B, beta-barrel domain II (24.7%)" QYPIVSIEDGLDESDWDGFAYQTK root "4.2.1.11 (99.8%) 6.3.4.2 (0.2%)" "phosphopyruvate hydratase (99.8%) CTP synthase (glutamine hydrolyzing) (0.2%)" "GO:0006096 (16.7%) GO:0006396 (0%) GO:0006401 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (15.9%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.1%)" "glycolytic process (16.7%) RNA processing (0%) RNA catabolic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (15.9%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.1%)" "IPR000941 (16.8%) IPR020810 (16.8%) IPR036849 (16.8%)" "Enolase (16.8%) Enolase, C-terminal TIM barrel domain (16.8%) Enolase-like, C-terminal domain superfamily (16.8%)" VCPAEQEIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.5.1 (100%) pyruvate dehydrogenase (quinone) (100%) "GO:0019752 (22.9%) GO:0044281 (2.1%)" "GO:0000287 (25%) GO:0030976 (25%) GO:0003824 (18.8%)" "carboxylic acid metabolic process (22.9%) small molecule metabolic process (2.1%)" "magnesium ion binding (25%) thiamine pyrophosphate binding (25%) catalytic activity (18.8%)" "IPR000399 (11.2%) IPR011766 (11.2%) IPR012001 (11.2%)" "TPP-binding enzyme, conserved site (11.2%) Thiamine pyrophosphate enzyme, TPP-binding (11.2%) Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (11.2%)" FGSFDMLAENNREQLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.4.24.- (85.7%) 3.4.24.71 (14.3%)" "Metalloendopeptidases (85.7%) endothelin-converting enzyme 1 (14.3%)" GO:0016485 (25.2%) GO:0005886 (25.2%) "GO:0004222 (25.2%) GO:0046872 (24.5%)" protein processing (25.2%) plasma membrane (25.2%) "metalloendopeptidase activity (25.2%) metal ion binding (24.5%)" "IPR000718 (20.2%) IPR008753 (20.2%) IPR042089 (20.2%)" "Peptidase M13 (20.2%) Peptidase M13, N-terminal domain (20.2%) Peptidase M13, domain 2 (20.2%)" GFAFAEMPNAAEAQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003723 (100%) RNA binding (100%) "IPR000504 (25%) IPR012677 (25%) IPR035979 (25%)" "RNA recognition motif domain (25%) Nucleotide-binding alpha-beta plait domain superfamily (25%) RNA-binding domain superfamily (25%)" STDYEYKYEAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (30%) IPR039565 (29.3%) IPR017689 (24.3%)" "Tetratricopeptide-like helical domain superfamily (30%) Outer membrane lipoprotein BamD-like (29.3%) Outer membrane protein assembly factor BamD (24.3%)" ALHEVGPYDPQLK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (25%)" GO:0005737 (25%) GO:0004801 (25%) "carbohydrate metabolic process (25%) pentose-phosphate shunt (25%)" cytoplasm (25%) transaldolase activity (25%) "IPR001585 (25%) IPR004732 (25%) IPR013785 (25%)" "Transaldolase/Fructose-6-phosphate aldolase (25%) Transaldolase type 2 (25%) Aldolase-type TIM barrel (25%)" VNFASTKNPLEYPDFLEVQLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (19.9%) GO:0000428 (20.2%) "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (19.7%)" DNA-templated transcription (19.9%) DNA-directed RNA polymerase complex (20.2%) "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (19.7%)" "IPR007644 (8%) IPR007642 (7.9%) IPR015712 (7.9%)" "RNA polymerase, beta subunit, protrusion (8%) RNA polymerase Rpb2, domain 2 (7.9%) DNA-directed RNA polymerase, subunit 2 (7.9%)" VIFNPADITGLITLLYSGLKPSQVTTLAALDSTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.37 (85.7%) 1.1.1.- (14.3%)" "malate dehydrogenase (85.7%) With NAD(+) or NADP(+) as acceptor (14.3%)" "GO:0006108 (33.7%) GO:0006099 (0.7%) GO:0019752 (0.3%)" GO:0005737 (0.7%) "GO:0016615 (30.3%) GO:0016616 (30.3%) GO:0030060 (4%)" "malate metabolic process (33.7%) tricarboxylic acid cycle (0.7%) carboxylic acid metabolic process (0.3%)" cytoplasm (0.7%) "malate dehydrogenase activity (30.3%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (30.3%) L-malate dehydrogenase (NAD+) activity (4%)" "IPR001236 (16.8%) IPR036291 (16.8%) IPR010945 (16.6%)" "Lactate/malate dehydrogenase, N-terminal (16.8%) NAD(P)-binding domain superfamily (16.8%) Malate dehydrogenase, type 2 (16.6%)" EKGYEVYAACANTGGFSEEQLKQNEENAYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.5 (100%) argininosuccinate synthase (100%) "GO:0000050 (16.3%) GO:0000053 (16.3%) GO:0006526 (16.3%)" GO:0005737 (16.3%) "GO:0004055 (16.3%) GO:0005524 (16.3%) GO:0016740 (2.2%)" "urea cycle (16.3%) argininosuccinate metabolic process (16.3%) L-arginine biosynthetic process (16.3%)" cytoplasm (16.3%) "argininosuccinate synthase activity (16.3%) ATP binding (16.3%) transferase activity (2.2%)" "IPR001518 (14.5%) IPR014729 (14.5%) IPR048267 (14.5%)" "Argininosuccinate synthase (14.5%) Rossmann-like alpha/beta/alpha sandwich fold (14.5%) Arginosuccinate synthase-like, N-terminal domain (14.5%)" AIAAIPEMHELNIGHAIIGR root "2.6.99.2 (99.7%) 2.7.8.7 (0.3%)" "pyridoxine 5'-phosphate synthase (99.7%) holo-[acyl-carrier-protein] synthase (0.3%)" "GO:0008615 (33.1%) GO:0006281 (0%) GO:0006310 (0%)" "GO:0005829 (33%) GO:0005737 (0%)" "GO:0033856 (33.1%) GO:0016740 (0.3%) GO:0000287 (0.1%)" "pyridoxine biosynthetic process (33.1%) DNA repair (0%) DNA recombination (0%)" "cytosol (33%) cytoplasm (0%)" "pyridoxine 5'-phosphate synthase activity (33.1%) transferase activity (0.3%) magnesium ion binding (0.1%)" "IPR004569 (33.2%) IPR013785 (33.2%) IPR036130 (33.2%)" "Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ (33.2%) Aldolase-type TIM barrel (33.2%) Pyridoxine 5'-phosphate synthase (33.2%)" KAQEAGITTVVFDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.2%)" "GO:0003735 (24.9%) GO:0008097 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.2%)" "structural constituent of ribosome (24.9%) 5S rRNA binding (24.9%)" "IPR005484 (33.9%) IPR004389 (33.5%) IPR057268 (32.6%)" "Large ribosomal subunit protein uL18, bacterial/plantae/animalia (33.9%) Large ribosomal subunit protein uL18, bacteria (33.5%) Large ribosomal subunit protein uL18 (32.6%)" DIISEILHSDKWLTLVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis TDMFNPLNSTK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR024311 (25%) IPR025112 (25%) IPR032186 (25%)" "Lipocalin-like domain (25%) Putative carbohydrate metabolism domain (25%) Domain of unknown function DUF5018 (25%)" RTHYGIGNNSPISDNEIHEIIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0034599 (33.3%) GO:0005737 (33.3%) GO:0016491 (33.3%) cellular response to oxidative stress (33.3%) cytoplasm (33.3%) oxidoreductase activity (33.3%) "IPR000415 (33.3%) IPR029479 (33.3%) IPR033877 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase Frm2/Hbn1-like (33.3%)" QIYHCNEGHAALINAQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0030170 (33.3%) GO:0008184 (32.4%) GO:0004645 (0.9%)" carbohydrate metabolic process (33.3%) "pyridoxal phosphate binding (33.3%) glycogen phosphorylase activity (32.4%) 1,4-alpha-oligoglucan phosphorylase activity (0.9%)" "IPR011834 (25.2%) IPR024517 (25.2%) IPR052182 (25.2%)" "Alpha-glucan phosphorylase (25.2%) Glycogen phosphorylase, domain of unknown function DUF3417 (25.2%) Glycogen_Maltodextrin_Phosphorylase (25.2%)" AQGAYIHNLSPFWDHYWK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0000166 (50%) GO:0016798 (50%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (50%)" "IPR000683 (25%) IPR036291 (25%) IPR049303 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) NAD(P)-binding domain superfamily (25%) Glycosyl hydrolase 109, C-terminal domain (25%)" IATLVAEFNKDANAQIENGNK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0003677 (50%) GO:0030527 (50%)" "DNA binding (50%) structural constituent of chromatin (50%)" IPR010886 (100%) Histone H1-like Hc1 (100%) ANVLVVPCLEVGNISYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0008959 (54.1%) GO:0016407 (45.9%)" "phosphate acetyltransferase activity (54.1%) acetyltransferase activity (45.9%)" "IPR002505 (16.7%) IPR004614 (16.7%) IPR012147 (16.7%)" "Phosphate acetyl/butaryl transferase (16.7%) Phosphate acetyltransferase (16.7%) Phosphate acetyl/butyryltransferase (16.7%)" LSAYKEDLKKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.18 (100%) 5-(carboxyamino)imidazole ribonucleotide mutase (100%) GO:0006189 (27.8%) GO:0016020 (27.8%) "GO:0034023 (27.8%) GO:0016829 (16.7%)" 'de novo' IMP biosynthetic process (27.8%) membrane (27.8%) "5-(carboxyamino)imidazole ribonucleotide mutase activity (27.8%) lyase activity (16.7%)" "IPR000031 (33.3%) IPR024694 (33.3%) IPR033747 (33.3%)" "PurE domain (33.3%) PurE, prokaryotic type (33.3%) Class I PurE (33.3%)" GKTVVVEGCEEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0005829 (100%) cytosol (100%) IPR017704 (100%) Putative selenium-binding protein YdfZ (100%) AVVMEVPVVLEGHAEGVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" AATHDVLAGLTAR root "GO:0006352 (25.2%) GO:0009408 (0%) GO:0045892 (0%)" "GO:0005737 (24.3%) GO:0000345 (0%) GO:0005829 (0%)" "GO:0003677 (25.1%) GO:0016987 (25.1%) GO:0003700 (0.1%)" "DNA-templated transcription initiation (25.2%) response to heat (0%) negative regulation of DNA-templated transcription (0%)" "cytoplasm (24.3%) cytosolic DNA-directed RNA polymerase complex (0%) cytosol (0%)" "DNA binding (25.1%) sigma factor activity (25.1%) DNA-binding transcription factor activity (0.1%)" "IPR013324 (6.8%) IPR036388 (6.8%) IPR050239 (6.8%)" "RNA polymerase sigma factor, region 3/4-like (6.8%) Winged helix-like DNA-binding domain superfamily (6.8%) Sigma-70 factor family, RNA polymerase initiation factors (6.8%)" VWAYQDGKPTLPVKPDCDAPAGVDYDMWLGPAPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (78.6%) GO:0050112 (21.4%)" "nucleotide binding (78.6%) inositol 2-dehydrogenase (NAD+) activity (21.4%)" "IPR000683 (25%) IPR036291 (25%) IPR043906 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) NAD(P)-binding domain superfamily (25%) Gfo/Idh/MocA-like oxidoreductase, bacterial type, C-terminal (25%)" AFLPIYDFSYEMTTLLSPDER root "GO:0006281 (0.1%) GO:0006950 (0.1%) GO:0009306 (0.1%)" "GO:0005737 (98.5%) GO:0016020 (0.1%)" "GO:0003677 (0.1%) GO:0003700 (0.1%) GO:0003908 (0.1%)" "DNA repair (0.1%) response to stress (0.1%) protein secretion (0.1%)" "cytoplasm (98.5%) membrane (0.1%)" "DNA binding (0.1%) DNA-binding transcription factor activity (0.1%) methylated-DNA-[protein]-cysteine S-methyltransferase activity (0.1%)" "IPR006016 (97.8%) IPR006015 (0.6%) IPR000595 (0.1%)" "UspA (97.8%) Universal stress protein A family (0.6%) Cyclic nucleotide-binding domain (0.1%)" IGEVYEADPDGKPIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.13.3 (100%) histidine kinase (100%) GO:0016020 (42.1%) "GO:0000155 (42.1%) GO:0005524 (15.8%)" membrane (42.1%) "phosphorelay sensor kinase activity (42.1%) ATP binding (15.8%)" "IPR000014 (10%) IPR003594 (10%) IPR003661 (10%)" "PAS domain (10%) Histidine kinase/HSP90-like ATPase domain (10%) Signal transduction histidine kinase, dimerisation/phosphoacceptor domain (10%)" GQYAENHQLSPDIEVYNTPEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.21.- (100%) Serine endopeptidases (100%) GO:0006508 (33.3%) GO:0005737 (33.3%) GO:0008236 (33.3%) proteolysis (33.3%) cytoplasm (33.3%) serine-type peptidase activity (33.3%) "IPR005151 (14.9%) IPR012393 (14.9%) IPR028204 (14.9%)" "Tail specific protease (14.9%) Tricorn protease (14.9%) Tricorn protease C1 domain (14.9%)" TQQNDESDYSNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006811 (20%) "GO:0009279 (20%) GO:0046930 (20%)" "GO:0015159 (20%) GO:0015288 (20%)" monoatomic ion transport (20%) "cell outer membrane (20%) pore complex (20%)" "polysaccharide transmembrane transporter activity (20%) porin activity (20%)" "IPR003715 (25%) IPR019554 (25%) IPR049712 (25%)" "Polysaccharide export protein, N-terminal domain (25%) Soluble ligand binding domain (25%) Polysaccharide export protein (25%)" VYYNLNMGPEFEEIEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" MGIGDVTQPLAPAVIEAMHK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.83 (100%) LL-diaminopimelate aminotransferase (100%) "GO:0033362 (32%) GO:0009089 (1.3%)" "GO:0010285 (33.3%) GO:0030170 (33.3%)" "lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway (32%) lysine biosynthetic process via diaminopimelate (1.3%)" "L,L-diaminopimelate aminotransferase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004839 (20%) IPR015421 (20%) IPR015422 (20%)" "Aminotransferase, class I/classII, large domain (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" SAMLSIFTTPSTAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" AVTHEVIDKEELGGAQVHSGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (22.2%) GO:0009317 (22.2%) "GO:0003989 (22.2%) GO:0004658 (22.2%) GO:0016740 (11.1%)" carbon fixation (22.2%) acetyl-CoA carboxylase complex (22.2%) "acetyl-CoA carboxylase activity (22.2%) propionyl-CoA carboxylase activity (22.2%) transferase activity (11.1%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" VALALYPVSMK root "IPR008323 (86.1%) IPR036086 (13.9%)" "Uncharacterised conserved protein UCP033563 (86.1%) ParB/Sulfiredoxin superfamily (13.9%)" NLRQEAMLEEMLKDPQVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.14.- (100%) Dipeptidyl-peptidases and tripeptidyl-peptidases (100%) "GO:0006508 (25%) GO:0043171 (25%)" "GO:0008239 (25%) GO:0070009 (25%)" "proteolysis (25%) peptide catabolic process (25%)" "dipeptidyl-peptidase activity (25%) serine-type aminopeptidase activity (25%)" "IPR009003 (33.3%) IPR019500 (33.3%) IPR043504 (33.3%)" "Peptidase S1, PA clan (33.3%) Peptidase S46 (33.3%) Peptidase S1, PA clan, chymotrypsin-like fold (33.3%)" IAFEEAEHAAK root "1.11.1.1 (96.1%) 1.14.12.17 (2.6%) 1.14.13.81 (1.3%)" "NADH peroxidase (96.1%) nitric oxide dioxygenase (2.6%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (1.3%)" "GO:0005506 (49.2%) GO:0016491 (24.5%) GO:0004601 (15%)" "iron ion binding (49.2%) oxidoreductase activity (24.5%) peroxidase activity (15%)" "IPR009040 (12.6%) IPR003251 (12.6%) IPR052773 (12.6%)" "Ferritin-like diiron domain (12.6%) Rubrerythrin, diiron-binding domain (12.6%) Anaerobic Bacterial Peroxidase-Related (12.6%)" ALHTAYYCFGTSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis AGVEVDDRGFIR root 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) "GO:0006103 (20.3%) GO:0006979 (19.8%) GO:0006090 (0%)" "GO:0005737 (18.7%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0004148 (20.3%) GO:0050660 (20.3%) GO:0016491 (0.2%)" "2-oxoglutarate metabolic process (20.3%) response to oxidative stress (19.8%) pyruvate metabolic process (0%)" "cytoplasm (18.7%) cytosol (0%) plasma membrane (0%)" "dihydrolipoyl dehydrogenase (NADH) activity (20.3%) flavin adenine dinucleotide binding (20.3%) oxidoreductase activity (0.2%)" "IPR023753 (12.8%) IPR036188 (12.8%) IPR050151 (12.8%)" "FAD/NAD(P)-binding domain (12.8%) FAD/NAD(P)-binding domain superfamily (12.8%) Class-I pyridine nucleotide-disulfide oxidoreductase (12.8%)" ELFNTEGSLYTSPGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" SKNEVIADIIALLQSPAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" LQSEKAENAPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.6.2.1 (100%) DNA topoisomerase (100%) GO:0006265 (25%) "GO:0003677 (25%) GO:0003917 (25%) GO:0046872 (25%)" DNA topological change (25%) "DNA binding (25%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25%) metal ion binding (25%)" "IPR000380 (7.1%) IPR003601 (7.1%) IPR003602 (7.1%)" "DNA topoisomerase, type IA (7.1%) DNA topoisomerase, type IA, domain 2 (7.1%) DNA topoisomerase, type IA, DNA-binding domain (7.1%)" AYYHETPEILK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%) GO:0019563 (16.5%)" "GO:0005829 (16.5%) GO:0016020 (0.4%)" GO:0004807 (16.5%) "gluconeogenesis (16.5%) glycolytic process (16.5%) glycerol catabolic process (16.5%)" "cytosol (16.5%) membrane (0.4%)" triose-phosphate isomerase activity (16.5%) "IPR000652 (20.1%) IPR013785 (20.1%) IPR035990 (20.1%)" "Triosephosphate isomerase (20.1%) Aldolase-type TIM barrel (20.1%) Triosephosphate isomerase superfamily (20.1%)" SEGNAIYLIDDEKTIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (24.6%) "GO:0005829 (24.6%) GO:0005739 (1.4%)" "GO:0004830 (24.6%) GO:0005524 (24.6%)" tryptophanyl-tRNA aminoacylation (24.6%) "cytosol (24.6%) mitochondrion (1.4%)" "tryptophan-tRNA ligase activity (24.6%) ATP binding (24.6%)" "IPR002305 (17.3%) IPR002306 (17.3%) IPR014729 (17.3%)" "Aminoacyl-tRNA synthetase, class Ic (17.3%) Tryptophan-tRNA ligase (17.3%) Rossmann-like alpha/beta/alpha sandwich fold (17.3%)" AVVETPEGDVIAIR Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.3.1.- (94.7%) 2.3.1.12 (2.6%) 2.3.1.61 (2.6%)" "Transferring groups other than amino-acyl groups (94.7%) dihydrolipoyllysine-residue acetyltransferase (2.6%) dihydrolipoyllysine-residue succinyltransferase (2.6%)" GO:0005737 (33.3%) "GO:0031405 (33.3%) GO:0016407 (32.4%) GO:0004742 (1%)" cytoplasm (33.3%) "lipoic acid binding (33.3%) acetyltransferase activity (32.4%) dihydrolipoyllysine-residue acetyltransferase activity (1%)" "IPR001078 (12.6%) IPR004167 (12.6%) IPR023213 (12.6%)" "2-oxoacid dehydrogenase acyltransferase, catalytic domain (12.6%) Peripheral subunit-binding domain (12.6%) Chloramphenicol acetyltransferase-like domain superfamily (12.6%)" FGNEFPLLIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (33.1%) "GO:0004476 (33.4%) GO:0008270 (33.4%)" carbohydrate metabolic process (33.1%) "mannose-6-phosphate isomerase activity (33.4%) zinc ion binding (33.4%)" "IPR046457 (16.8%) IPR051804 (16.8%) IPR011051 (16.6%)" "Phosphomannose isomerase type I, catalytic domain (16.8%) Carbohydrate Metabolism Regulated Kinase/Isomerase (16.8%) RmlC-like cupin domain superfamily (16.6%)" SVVTGVEMFRK root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0.1%) GO:0032790 (0%) GO:0070125 (0%)" "GO:0005829 (17.8%) GO:0032045 (5.3%) GO:0005737 (0.4%)" "GO:0003746 (18.3%) GO:0005525 (18.2%) GO:0003924 (17.9%)" "translational elongation (0.1%) ribosome disassembly (0%) mitochondrial translational elongation (0%)" "cytosol (17.8%) guanyl-nucleotide exchange factor complex (5.3%) cytoplasm (0.4%)" "translation elongation factor activity (18.3%) GTP binding (18.2%) GTPase activity (17.9%)" "IPR004161 (8.5%) IPR009000 (8.5%) IPR050055 (8.5%)" "Translation elongation factor EFTu-like, domain 2 (8.5%) Translation protein, beta-barrel domain superfamily (8.5%) Elongation factor Tu GTPase (8.5%)" VVETYFKDLDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae TIQIVPHITDEIKR Pseudomonadati Bacteria Pseudomonadati 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.1%) GO:0044210 (11.1%)" "GO:0005829 (11.1%) GO:0097268 (11.1%)" "GO:0003883 (11.1%) GO:0004359 (11.1%) GO:0005524 (11.1%)" "pyrimidine nucleobase biosynthetic process (11.1%) 'de novo' CTP biosynthetic process (11.1%)" "cytosol (11.1%) cytoophidium (11.1%)" "CTP synthase activity (11.1%) glutaminase activity (11.1%) ATP binding (11.1%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" MKQEGGSVGSQATATDAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015159 (100%) polysaccharide transmembrane transporter activity (100%) "IPR003715 (33.3%) IPR019554 (33.3%) IPR049712 (33.3%)" "Polysaccharide export protein, N-terminal domain (33.3%) Soluble ligand binding domain (33.3%) Polysaccharide export protein (33.3%)" IWDVLVDPARK root "2.4.99.17 (99.8%) 5.-.-.- (0.2%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase (99.8%) Isomerases (0.2%)" "GO:0002099 (33.2%) GO:0008616 (0.2%)" "GO:0005737 (33.2%) GO:0016020 (0.1%)" "GO:0051075 (33.2%) GO:0016853 (0%) GO:0016740 (0%)" "tRNA wobble guanine modification (33.2%) tRNA queuosine(34) biosynthetic process (0.2%)" "cytoplasm (33.2%) membrane (0.1%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity (33.2%) isomerase activity (0%) transferase activity (0%)" "IPR003699 (25.1%) IPR036100 (25%) IPR042118 (25%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA (25.1%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily (25%) QueA, domain 1 (25%)" EHGTQHSDAILTR root "1.2.1.41 (99.6%) 1.-.-.- (0.4%)" "glutamate-5-semialdehyde dehydrogenase (99.6%) Oxidoreductases (0.4%)" "GO:0055129 (22.6%) GO:0006561 (6.3%) GO:0044780 (0.1%)" "GO:0005737 (20.6%) GO:0005829 (0.1%) GO:0009424 (0.1%)" "GO:0004350 (28.7%) GO:0050661 (20.7%) GO:0016491 (0.8%)" "L-proline biosynthetic process (22.6%) obsolete proline biosynthetic process (6.3%) bacterial-type flagellum assembly (0.1%)" "cytoplasm (20.6%) cytosol (0.1%) bacterial-type flagellum hook (0.1%)" "glutamate-5-semialdehyde dehydrogenase activity (28.7%) NADP binding (20.7%) oxidoreductase activity (0.8%)" "IPR020593 (15.9%) IPR016161 (15.8%) IPR016163 (15.8%)" "Gamma-glutamyl phosphate reductase GPR, conserved site (15.9%) Aldehyde/histidinol dehydrogenase (15.8%) Aldehyde dehydrogenase, C-terminal (15.8%)" EILLLDDDGNELLLPK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006353 (19.4%) GO:0031564 (19.4%)" GO:0005829 (19.4%) "GO:0003700 (19.4%) GO:0003723 (19.4%) GO:0000166 (3%)" "DNA-templated transcription termination (19.4%) transcription antitermination (19.4%)" cytosol (19.4%) "DNA-binding transcription factor activity (19.4%) RNA binding (19.4%) nucleotide binding (3%)" "IPR009019 (11.6%) IPR010213 (11.6%) IPR012340 (11.6%)" "K homology domain superfamily, prokaryotic type (11.6%) Transcription factor NusA (11.6%) Nucleic acid-binding, OB-fold (11.6%)" AGAANAALLAAQILATHDKELHQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "5.4.99.18 (88.7%) 4.1.1.21 (10.6%) 6.3.4.18 (0.7%)" "5-(carboxyamino)imidazole ribonucleotide mutase (88.7%) phosphoribosylaminoimidazole carboxylase (10.6%) 5-(carboxyamino)imidazole ribonucleotide synthase (0.7%)" GO:0006189 (35.8%) GO:0005829 (0.6%) "GO:0034023 (34.6%) GO:0016829 (22%) GO:0004638 (3.1%)" 'de novo' IMP biosynthetic process (35.8%) cytosol (0.6%) "5-(carboxyamino)imidazole ribonucleotide mutase activity (34.6%) lyase activity (22%) phosphoribosylaminoimidazole carboxylase activity (3.1%)" "IPR000031 (33.2%) IPR024694 (33%) IPR033747 (31.9%)" "PurE domain (33.2%) PurE, prokaryotic type (33%) Class I PurE (31.9%)" GTLHWLSCNHCLPAEVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (24.6%) GO:0005829 (24.6%) "GO:0004819 (24.6%) GO:0005524 (24.6%) GO:0016874 (1.5%)" glutaminyl-tRNA aminoacylation (24.6%) cytosol (24.6%) "glutamine-tRNA ligase activity (24.6%) ATP binding (24.6%) ligase activity (1.5%)" "IPR000924 (10.1%) IPR004514 (10.1%) IPR011035 (10.1%)" "Glutamyl/glutaminyl-tRNA synthetase (10.1%) Glutamine-tRNA synthetase (10.1%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (10.1%)" CTYFAVIDKLQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (64.8%) IPR019734 (35.2%)" "Tetratricopeptide-like helical domain superfamily (64.8%) Tetratricopeptide repeat (35.2%)" IDPVGACVGMR root "2.7.7.8 (50%) 5.4.99.25 (50%)" "polyribonucleotide nucleotidyltransferase (50%) tRNA pseudouridine(55) synthase (50%)" "GO:0006353 (16.4%) GO:0031564 (16.4%) GO:0006281 (0%)" "GO:0005829 (16.4%) GO:0005737 (0%) GO:0005840 (0%)" "GO:0003723 (16.4%) GO:0003700 (16.2%) GO:0000166 (16.1%)" "DNA-templated transcription termination (16.4%) transcription antitermination (16.4%) DNA repair (0%)" "cytosol (16.4%) cytoplasm (0%) ribosome (0%)" "RNA binding (16.4%) DNA-binding transcription factor activity (16.2%) nucleotide binding (16.1%)" "IPR025249 (8.6%) IPR030842 (8.6%) IPR009019 (8.6%)" "Transcription factor NusA, first KH domain (8.6%) Transcription factor NusA, prokaryotes (8.6%) K homology domain superfamily, prokaryotic type (8.6%)" AGLEDYFIEQER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016853 (100%) isomerase activity (100%) "IPR006311 (20%) IPR013022 (20%) IPR019546 (20%)" "Twin-arginine translocation pathway, signal sequence (20%) Xylose isomerase-like, TIM barrel domain (20%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (20%)" EVPADAYYGVHTLR root "4.3.1.1 (99.8%) 4.-.-.- (0.2%)" "aspartate ammonia-lyase (99.8%) Lyases (0.2%)" "GO:0006531 (20.7%) GO:0006099 (19%) GO:0006533 (0%)" "GO:0005829 (20.7%) GO:0016020 (0%)" "GO:0008797 (20.7%) GO:0042802 (18.3%) GO:0016829 (0.3%)" "aspartate metabolic process (20.7%) tricarboxylic acid cycle (19%) L-aspartate catabolic process (0%)" "cytosol (20.7%) membrane (0%)" "aspartate ammonia-lyase activity (20.7%) identical protein binding (18.3%) lyase activity (0.3%)" "IPR008948 (13%) IPR024083 (13%) IPR051546 (13%)" "L-Aspartase-like (13%) Fumarase/histidase, N-terminal (13%) Class-II Aspartate Ammonia-Lyase (13%)" MREEDPTWEVEQSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" LVKENGTVVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0016787 (50%) GO:0046872 (50%)" "hydrolase activity (50%) metal ion binding (50%)" IPR039461 (100%) Peptidase family M49 (100%) SRPYLFSNSVAPAIIGASLEMFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (13.8%) GO:0030148 (13.8%)" "GO:0005829 (13.8%) GO:0016020 (13.8%)" "GO:0008890 (13.8%) GO:0030170 (13.8%) GO:0004758 (9.2%)" "L-threonine catabolic process to glycine (13.8%) sphingolipid biosynthetic process (13.8%)" "cytosol (13.8%) membrane (13.8%)" "glycine C-acetyltransferase activity (13.8%) pyridoxal phosphate binding (13.8%) serine C-palmitoyltransferase activity (9.2%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" VAWCTGGGQSFIDSAAR root 3.5.4.16 (100%) GTP cyclohydrolase I (100%) "GO:0006281 (27.5%) GO:0005975 (0.1%) GO:0010212 (0.1%)" "GO:0005737 (29.7%) GO:0005829 (0.1%) GO:0060187 (0.1%)" "GO:0046872 (29.7%) GO:0016787 (12.7%) GO:0003934 (0.1%)" "DNA repair (27.5%) carbohydrate metabolic process (0.1%) response to ionizing radiation (0.1%)" "cytoplasm (29.7%) cytosol (0.1%) cell pole (0.1%)" "metal ion binding (29.7%) hydrolase activity (12.7%) GTP cyclohydrolase I activity (0.1%)" "IPR002678 (49.7%) IPR036069 (49.7%) IPR003778 (0.1%)" "DUF34/NIF3 (49.7%) DUF34/NIF3 superfamily (49.7%) Carboxyltransferase domain, subdomain A and B (0.1%)" VGFGSGVIISK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.4.21.107 (67.5%) 3.4.21.- (22.5%) 3.4.21.108 (10%)" "peptidase Do (67.5%) Serine endopeptidases (22.5%) HtrA2 peptidase (10%)" GO:0006508 (45.8%) "GO:0042597 (1.2%) GO:0030313 (0.8%)" "GO:0004252 (45.8%) GO:0003676 (3.5%) GO:0016740 (2.7%)" proteolysis (45.8%) "periplasmic space (1.2%) cell envelope (0.8%)" "serine-type endopeptidase activity (45.8%) nucleic acid binding (3.5%) transferase activity (2.7%)" "IPR001940 (19.4%) IPR009003 (19.4%) IPR001478 (19%)" "Peptidase S1C (19.4%) Peptidase S1, PA clan (19.4%) PDZ domain (19%)" NSFNIASMSFDPEIIFNNIKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" GTQTDGHAYIPAAVEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.2.13 (100%) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (100%) "GO:0008360 (12.8%) GO:0051301 (12.8%) GO:0009252 (12.1%)" GO:0005737 (12.8%) "GO:0005524 (12.8%) GO:0008765 (12.8%) GO:0000287 (12.1%)" "regulation of cell shape (12.8%) cell division (12.8%) peptidoglycan biosynthetic process (12.1%)" cytoplasm (12.8%) "ATP binding (12.8%) UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity (12.8%) magnesium ion binding (12.1%)" "IPR000713 (14.5%) IPR005761 (14.5%) IPR013221 (14.5%)" "Mur ligase, N-terminal catalytic domain (14.5%) UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (14.5%) Mur ligase, central (14.5%)" ALEAFFSSVTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" MYTIQTNASGTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae DRVDDALCATR root 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.4%) "GO:0005737 (15.8%) GO:0005739 (0.1%)" "GO:0005524 (17.4%) GO:0140662 (17.4%) GO:0016853 (16.2%)" protein refolding (17.4%) "cytoplasm (15.8%) mitochondrion (0.1%)" "ATP binding (17.4%) ATP-dependent protein folding chaperone (17.4%) isomerase activity (16.2%)" "IPR001844 (17%) IPR002423 (17%) IPR027413 (16.7%)" "Chaperonin Cpn60/GroEL (17%) Chaperonin Cpn60/GroEL/TCP-1 family (17%) GroEL-like equatorial domain superfamily (16.7%)" VRFPETSSFGVKPVSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.42 (100%) isocitrate dehydrogenase (NADP(+)) (100%) "GO:0006099 (20.2%) GO:0006097 (19.3%)" "GO:0004450 (20.2%) GO:0000287 (19.3%) GO:0051287 (19.3%)" "tricarboxylic acid cycle (20.2%) glyoxylate cycle (19.3%)" "isocitrate dehydrogenase (NADP+) activity (20.2%) magnesium ion binding (19.3%) NAD binding (19.3%)" "IPR004439 (33.8%) IPR024084 (33.8%) IPR019818 (32.4%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (33.8%) Isopropylmalate dehydrogenase-like domain (33.8%) Isocitrate/isopropylmalate dehydrogenase, conserved site (32.4%)" VMIVDEQTGR root "7.4.2.8 (99.7%) 7.4.2.4 (0.3%)" "protein-secreting ATPase (99.7%) chloroplast protein-transporting ATPase (0.3%)" "GO:0006605 (12.2%) GO:0017038 (12.2%) GO:0043952 (12.1%)" "GO:0005829 (12.2%) GO:0005886 (12.2%) GO:0031522 (12.1%)" "GO:0005524 (12.2%) GO:0046872 (1.9%) GO:0004386 (0.4%)" "protein targeting (12.2%) protein import (12.2%) protein transport by the Sec complex (12.1%)" "cytosol (12.2%) plasma membrane (12.2%) cell envelope Sec protein transport complex (12.1%)" "ATP binding (12.2%) metal ion binding (1.9%) helicase activity (0.4%)" "IPR000185 (8.3%) IPR011115 (8.3%) IPR014018 (8.3%)" "Protein translocase subunit SecA (8.3%) SecA DEAD-like, N-terminal (8.3%) SecA motor DEAD (8.3%)" MKITDLKPTIVWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" WPGGMLTNFPTIRK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (33.2%) "GO:0022627 (33.1%) GO:0005840 (0.4%)" GO:0003735 (33.2%) translation (33.2%) "cytosolic small ribosomal subunit (33.1%) ribosome (0.4%)" structural constituent of ribosome (33.2%) "IPR001865 (25.1%) IPR023591 (25.1%) IPR005706 (25.1%)" "Small ribosomal subunit protein uS2 (25.1%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.1%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.1%)" DQGLSLYQLLQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (24.5%) GO:0006166 (24.5%)" "GO:0008973 (24.5%) GO:0000287 (22.4%) GO:0004614 (4.1%)" "carbohydrate metabolic process (24.5%) purine ribonucleoside salvage (24.5%)" "phosphopentomutase activity (24.5%) magnesium ion binding (22.4%) phosphoglucomutase activity (4.1%)" "IPR005843 (13%) IPR005846 (13%) IPR016055 (13%)" "Alpha-D-phosphohexomutase, C-terminal (13%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (13%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (13%)" ADDYFAHDETHVMQVECVDNLLDMGHGVNLVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0000166 (25%) GO:0047850 (25%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "nucleotide binding (25%) diaminopimelate dehydrogenase activity (25%)" "IPR000683 (25%) IPR010190 (25%) IPR032094 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Diaminopimelate dehydrogenase, Ddh (25%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25%)" AAELGYVDEIIEPSITR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (24%) GO:0009317 (24%) "GO:0003989 (24%) GO:0004658 (24%) GO:0016740 (4%)" carbon fixation (24%) acetyl-CoA carboxylase complex (24%) "acetyl-CoA carboxylase activity (24%) propionyl-CoA carboxylase activity (24%) transferase activity (4%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" FGFAPEYILPHDSYLINLGHPEEEGLTK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.1.21.2 (100%) deoxyribonuclease IV (100%) GO:0006284 (16.7%) "GO:0003677 (16.7%) GO:0003906 (16.7%) GO:0008081 (16.7%)" base-excision repair (16.7%) "DNA binding (16.7%) DNA-(apurinic or apyrimidinic site) endonuclease activity (16.7%) phosphoric diester hydrolase activity (16.7%)" "IPR001719 (25%) IPR013022 (25%) IPR018246 (25%)" "AP endonuclease 2 (25%) Xylose isomerase-like, TIM barrel domain (25%) AP endonuclease 2, zinc binding site (25%)" GIAAALVEATYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0016740 (100%) transferase activity (100%) "IPR016181 (33.3%) IPR031165 (33.3%) IPR045057 (33.3%)" "Acyl-CoA N-acyltransferase (33.3%) Yjdj-type Gcn5-related N-acetyltransferase (33.3%) Gcn5-related N-acetyltransferase (33.3%)" TVLIMELINNIAK root "7.1.2.2 (100%) 3.6.3.14 (0%)" "H(+)-transporting two-sector ATPase (100%) Transferred entry: 7.1.2.2 (0%)" "GO:0042776 (16.5%) GO:0006754 (0%) GO:1902600 (0%)" "GO:0045259 (16.6%) GO:0005739 (16.5%) GO:0009535 (15.8%)" "GO:0005524 (16.7%) GO:0046933 (16.6%) GO:0016887 (0.2%)" "proton motive force-driven mitochondrial ATP synthesis (16.5%) ATP biosynthetic process (0%) proton transmembrane transport (0%)" "proton-transporting ATP synthase complex (16.6%) mitochondrion (16.5%) chloroplast thylakoid membrane (15.8%)" "ATP binding (16.7%) proton-transporting ATP synthase activity, rotational mechanism (16.6%) ATP hydrolysis activity (0.2%)" "IPR050053 (10.2%) IPR000194 (10.2%) IPR027417 (10.2%)" "ATPase alpha/beta chains (10.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.2%) P-loop containing nucleoside triphosphate hydrolase (10.2%)" ITADLKGVPFEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25.5%) "GO:0004494 (25.5%) GO:0031419 (25.5%) GO:0046872 (23.6%)" lactate fermentation to propionate and acetate (25.5%) "methylmalonyl-CoA mutase activity (25.5%) cobalamin binding (25.5%) metal ion binding (23.6%)" "IPR004608 (25.5%) IPR006099 (25.5%) IPR016176 (25.5%)" "Methylmalonyl-CoA mutase, small subunit (25.5%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25.5%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25.5%)" GMDITHAIEDQIDLSNVLKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.2.14 (100%) amidophosphoribosyltransferase (100%) "GO:0016757 (72.7%) GO:0004044 (27.3%)" "glycosyltransferase activity (72.7%) amidophosphoribosyltransferase activity (27.3%)" "IPR017932 (33.3%) IPR029055 (33.3%) IPR029057 (33.3%)" "Glutamine amidotransferase type 2 domain (33.3%) Nucleophile aminohydrolases, N-terminal (33.3%) Phosphoribosyltransferase-like (33.3%)" AFDQIDNAPEEKAR root "3.6.5.3 (99.9%) 1.97.1.4 (0.1%)" "protein-synthesizing GTPase (99.9%) [formate-C-acetyltransferase]-activating enzyme (0.1%)" "GO:0006414 (0%) GO:0046677 (0%) GO:0032790 (0%)" "GO:0005829 (18%) GO:0032045 (8.6%) GO:0005886 (0.6%)" "GO:0003746 (18.2%) GO:0003924 (18.1%) GO:0005525 (18.1%)" "translational elongation (0%) response to antibiotic (0%) ribosome disassembly (0%)" "cytosol (18%) guanyl-nucleotide exchange factor complex (8.6%) plasma membrane (0.6%)" "translation elongation factor activity (18.2%) GTPase activity (18.1%) GTP binding (18.1%)" "IPR000795 (11.9%) IPR050055 (11.9%) IPR027417 (11.9%)" "Translational (tr)-type GTP-binding domain (11.9%) Elongation factor Tu GTPase (11.9%) P-loop containing nucleoside triphosphate hydrolase (11.9%)" IMLDAPYTKPDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (13.4%) GO:0006526 (13.4%) GO:0006541 (13.4%)" GO:0005737 (13.4%) "GO:0004088 (13.4%) GO:0005524 (13.4%) GO:0046872 (13.4%)" "pyrimidine nucleotide biosynthetic process (13.4%) L-arginine biosynthetic process (13.4%) glutamine metabolic process (13.4%)" cytoplasm (13.4%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.4%) ATP binding (13.4%) metal ion binding (13.4%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" TVEAIVASAPDGAIFNNAGQVLNHTLYFLQFAPKPAKNEPAGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.15.1.1 (100%) superoxide dismutase (100%) GO:0005737 (33.3%) "GO:0004784 (33.3%) GO:0046872 (33.3%)" cytoplasm (33.3%) "superoxide dismutase activity (33.3%) metal ion binding (33.3%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" MTYSHEVEHMCVVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006879 (25%) GO:0005737 (25%) "GO:0008198 (25%) GO:0051537 (25%)" intracellular iron ion homeostasis (25%) cytoplasm (25%) "ferrous iron binding (25%) 2 iron, 2 sulfur cluster binding (25%)" ELKELGCAGPDYHYTVFR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006629 (50%) "GO:0008081 (47.2%) GO:0008889 (2.8%)" lipid metabolic process (50%) "phosphoric diester hydrolase activity (47.2%) glycerophosphodiester phosphodiesterase activity (2.8%)" "IPR017946 (50%) IPR030395 (50%)" "PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily (50%) Glycerophosphodiester phosphodiesterase domain (50%)" LLDNAAADLAAISGQK root "GO:0006412 (16.6%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (17.1%) GO:1990904 (16.4%) GO:0005829 (0.1%)" "GO:0003735 (16.6%) GO:0000049 (16.4%) GO:0019843 (16.4%)" "translation (16.6%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (17.1%) ribonucleoprotein complex (16.4%) cytosol (0.1%)" "structural constituent of ribosome (16.6%) tRNA binding (16.4%) rRNA binding (16.4%)" "IPR022803 (17%) IPR031310 (17%) IPR002132 (17%)" "Large ribosomal subunit protein uL5 domain superfamily (17%) Large ribosomal subunit protein uL5, N-terminal (17%) Large ribosomal subunit protein uL5 (17%)" FGGNLGTTGSLAFLFDHK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006355 (32.5%) GO:0005829 (33.8%) GO:0003677 (33.8%) regulation of DNA-templated transcription (32.5%) cytosol (33.8%) DNA binding (33.8%) "IPR002876 (16.7%) IPR017856 (16.7%) IPR026564 (16.7%)" "Transcriptional regulator TACO1-like (16.7%) Integrase-like, N-terminal (16.7%) Transcriptional regulator TACO1-like, domain 3 (16.7%)" VYLRPETAQGIFVNFLNVQK root "6.1.1.14 (99.7%) 3.1.1.96 (0.3%)" "glycine--tRNA ligase (99.7%) D-aminoacyl-tRNA deacylase (0.3%)" "GO:0006426 (12.7%) GO:0015966 (12.2%) GO:0044281 (0.3%)" "GO:0005737 (12.7%) GO:0070062 (12.2%) GO:1990742 (12.2%)" "GO:0004820 (12.7%) GO:0005524 (12.7%) GO:0004081 (12.2%)" "glycyl-tRNA aminoacylation (12.7%) diadenosine tetraphosphate biosynthetic process (12.2%) small molecule metabolic process (0.3%)" "cytoplasm (12.7%) extracellular exosome (12.2%) microvesicle (12.2%)" "glycine-tRNA ligase activity (12.7%) ATP binding (12.7%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.2%)" "IPR002314 (11.2%) IPR006195 (11.2%) IPR027031 (11.2%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.2%) Aminoacyl-tRNA synthetase, class II (11.2%) Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 (11.2%)" IINEPTAAALAYGLDKKQND Alistipes dispar Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Rikenellaceae Alistipes Alistipes dispar GO:0005737 (25%) "GO:0005524 (25%) GO:0051082 (25%) GO:0140662 (25%)" cytoplasm (25%) "ATP binding (25%) unfolded protein binding (25%) ATP-dependent protein folding chaperone (25%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" AHHYPSELSGGQQQR root "3.1.11.- (37%) 3.6.1.15 (29.6%) 3.6.1.3 (29.6%)" "Exodeoxyribonucleases producing 5'-phosphomonoesters (37%) nucleoside-triphosphate phosphatase (29.6%) Deleted entry (29.6%)" "GO:0046677 (0.5%) GO:0006865 (0.1%) GO:0006868 (0%)" "GO:0005886 (24.7%) GO:0043190 (0.1%) GO:0016020 (0%)" "GO:0005524 (25.4%) GO:0016887 (24.9%) GO:0015424 (23.6%)" "response to antibiotic (0.5%) amino acid transport (0.1%) glutamine transport (0%)" "plasma membrane (24.7%) ATP-binding cassette (ABC) transporter complex (0.1%) membrane (0%)" "ATP binding (25.4%) ATP hydrolysis activity (24.9%) ABC-type amino acid transporter activity (23.6%)" "IPR003439 (16.8%) IPR027417 (16.8%) IPR017871 (16.6%)" "ABC transporter-like, ATP-binding domain (16.8%) P-loop containing nucleoside triphosphate hydrolase (16.8%) ABC transporter-like, conserved site (16.6%)" LFNKGVADFSR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "7.2.1.1 (94.4%) 1.6.5.- (5.6%)" "NADH:ubiquinone reductase (Na(+)-transporting) (94.4%) With a quinone or similar compound as acceptor (5.6%)" GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (21%) IPR022615 (21%) IPR056147 (21%)" "Na(+)-translocating NADH-quinone reductase subunit A (21%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (21%) NqrA, N-terminal barrel-sandwich hybrid domain (21%)" NLKQNYTGLFQAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR049273 (50%) IPR053996 (50%)" "DUF3829-like, N-terminal domain (50%) DUF3829-like, C-terminal domain (50%)" LQEEWLTELLKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (51.7%) IPR041662 (48.3%)" "Tetratricopeptide-like helical domain superfamily (51.7%) SusD-like 2 (48.3%)" YLEMAEGYCTR Bacteria Bacteria ITGVIPVDLAVEQMKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (72.2%) 1.2.7.- (16.7%) 1.2.1.51 (11.1%)" "pyruvate synthase (72.2%) With an iron-sulfur protein as acceptor (16.7%) pyruvate dehydrogenase (NADP(+)) (11.1%)" "GO:0006979 (14.7%) GO:0022900 (14.5%) GO:0044281 (11.8%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.7%) electron transport chain (14.5%) small molecule metabolic process (11.8%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.8%) IPR050722 (7.8%) IPR011766 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%) Thiamine pyrophosphate enzyme, TPP-binding (7.7%)" TAYPIELGTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004826 (16.7%) GO:0005524 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) phenylalanine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002319 (14.5%) IPR004188 (14.5%) IPR045864 (14.5%)" "Phenylalanyl-tRNA synthetase (14.5%) Phenylalanine-tRNA ligase, class II, N-terminal (14.5%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.5%)" FIVSSTGLFSHLQAISR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006271 (16.7%) "GO:0005737 (16.7%) GO:0009360 (16.7%)" "GO:0003677 (16.7%) GO:0003887 (16.7%) GO:0008408 (16.7%)" DNA strand elongation involved in DNA replication (16.7%) "cytoplasm (16.7%) DNA polymerase III complex (16.7%)" "DNA binding (16.7%) DNA-directed DNA polymerase activity (16.7%) 3'-5' exonuclease activity (16.7%)" "IPR001001 (20%) IPR022634 (20%) IPR022635 (20%)" "DNA polymerase III, beta sliding clamp (20%) DNA polymerase III, beta sliding clamp, N-terminal (20%) DNA polymerase III, beta sliding clamp, C-terminal (20%)" FEMDYNKDIDKDLIGPEYLPAWEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (16.7%) GO:0005886 (16.7%) "GO:0009055 (16.7%) GO:0016655 (16.7%) GO:0046872 (16.7%)" sodium ion transport (16.7%) plasma membrane (16.7%) "electron transfer activity (16.7%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (16.7%) metal ion binding (16.7%)" "IPR001041 (10%) IPR001433 (10%) IPR001709 (10%)" "2Fe-2S ferredoxin-type iron-sulfur binding domain (10%) Oxidoreductase FAD/NAD(P)-binding (10%) Flavoprotein pyridine nucleotide cytochrome reductase (10%)" GTVIDHIPAQIGFK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006207 (21.3%) GO:0006221 (21.1%)" "GO:0009347 (21.3%) GO:0005737 (0.1%)" "GO:0046872 (20.7%) GO:0016740 (15.1%) GO:0008270 (0.2%)" "'de novo' pyrimidine nucleobase biosynthetic process (21.3%) pyrimidine nucleotide biosynthetic process (21.1%)" "aspartate carbamoyltransferase complex (21.3%) cytoplasm (0.1%)" "metal ion binding (20.7%) transferase activity (15.1%) zinc ion binding (0.2%)" "IPR020545 (20.3%) IPR036793 (20.3%) IPR002801 (20%)" "Aspartate carbamoyltransferase regulatory subunit, N-terminal (20.3%) Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily (20.3%) Aspartate transcarbamylase regulatory subunit (20%)" AITNMGGTMR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.9%) GO:0044210 (11.9%) GO:0006241 (0.2%)" "GO:0005829 (11.9%) GO:0097268 (10.8%)" "GO:0003883 (11.9%) GO:0005524 (11.9%) GO:0042802 (11.9%)" "pyrimidine nucleobase biosynthetic process (11.9%) 'de novo' CTP biosynthetic process (11.9%) CTP biosynthetic process (0.2%)" "cytosol (11.9%) cytoophidium (10.8%)" "CTP synthase activity (11.9%) ATP binding (11.9%) identical protein binding (11.9%)" "IPR029062 (17%) IPR004468 (16.8%) IPR017926 (16.8%)" "Class I glutamine amidotransferase-like (17%) CTP synthase (16.8%) Glutamine amidotransferase (16.8%)" SKVAGEDIQVSAPTTAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0000917 (14.3%) GO:0043093 (14.3%) GO:0051258 (14.3%)" "GO:0005737 (14.3%) GO:0032153 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%)" "division septum assembly (14.3%) FtsZ-dependent cytokinesis (14.3%) protein polymerization (14.3%)" "cytoplasm (14.3%) cell division site (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" ATIVMCLLSDAAVMSVWPTIKPCLTQGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.1.1.86 (100%) ketol-acid reductoisomerase (NADP(+)) (100%) "GO:0009097 (20%) GO:0009099 (20%)" "GO:0004455 (20%) GO:0016853 (20%) GO:0046872 (20%)" "isoleucine biosynthetic process (20%) L-valine biosynthetic process (20%)" "ketol-acid reductoisomerase activity (20%) isomerase activity (20%) metal ion binding (20%)" "IPR000506 (16.7%) IPR008927 (16.7%) IPR013023 (16.7%)" "Ketol-acid reductoisomerase, C-terminal (16.7%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.7%) Ketol-acid reductoisomerase (16.7%)" AVEVSEEITETPAEETIVEKPTENASK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR007139 (100%) Protein of unknown function DUF349 (100%) LLANQEEGTQIR root "GO:0016226 (24.7%) GO:0051604 (24.7%) GO:0006979 (0%)" GO:0005829 (0%) "GO:0051539 (24.8%) GO:0005506 (24.7%) GO:0046872 (0.8%)" "iron-sulfur cluster assembly (24.7%) protein maturation (24.7%) response to oxidative stress (0%)" cytosol (0%) "4 iron, 4 sulfur cluster binding (24.8%) iron ion binding (24.7%) metal ion binding (0.8%)" "IPR035903 (20.4%) IPR000361 (20.1%) IPR034904 (19.9%)" "HesB-like domain superfamily (20.4%) Core domain, A-type assembly protein ATAP (20.1%) Fe-S cluster assembly domain superfamily (19.9%)" LIADHQQNTVIIMGPGHGGPAGTAQSYLDGTYTETFPK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 4.1.2.22 (100%) fructose-6-phosphate phosphoketolase (100%) GO:0005975 (33.3%) "GO:0000287 (33.3%) GO:0016832 (26.7%) GO:0047905 (6.7%)" carbohydrate metabolic process (33.3%) "magnesium ion binding (33.3%) aldehyde-lyase activity (26.7%) fructose-6-phosphate phosphoketolase activity (6.7%)" "IPR005593 (14.3%) IPR009014 (14.3%) IPR018969 (14.3%)" "Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase (14.3%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (14.3%) Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal (14.3%)" SMEDQNSTSDDTPATK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005886 (100%) plasma membrane (100%) "IPR035965 (36.4%) IPR038062 (36.4%) IPR012312 (27.3%)" "PAS domain superfamily (36.4%) ScdA-like, N-terminal domain superfamily (36.4%) Hemerythrin-like (27.3%)" ATLGEVGNAEHMLR root "GO:0002181 (17.2%) GO:0000027 (0%) GO:0006412 (0%)" "GO:0015934 (16%) GO:0005829 (13.3%) GO:0005840 (1.4%)" "GO:0003735 (17.3%) GO:0016740 (16.1%) GO:0019843 (15.6%)" "cytoplasmic translation (17.2%) ribosomal large subunit assembly (0%) translation (0%)" "large ribosomal subunit (16%) cytosol (13.3%) ribosome (1.4%)" "structural constituent of ribosome (17.3%) transferase activity (16.1%) rRNA binding (15.6%)" "IPR002171 (11.6%) IPR008991 (11.6%) IPR014722 (11.6%)" "Large ribosomal subunit protein uL2 (11.6%) Translation protein SH3-like domain superfamily (11.6%) Large ribosomal subunit protein uL2, domain 2 (11.6%)" TRELHTSQALDAINYEVLDDYR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (16.7%) IPR014628 (16.7%) IPR014710 (16.7%)" "RmlC-like cupin domain superfamily (16.7%) Mannose-6-phosphate isomerase, Firmicutes type, short form (16.7%) RmlC-like jelly roll fold (16.7%)" SADIRPGITLACTECKER Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0006412 (20%) "GO:0005737 (20%) GO:0005840 (20%) GO:1990904 (20%)" GO:0003735 (20%) translation (20%) "cytoplasm (20%) ribosome (20%) ribonucleoprotein complex (20%)" structural constituent of ribosome (20%) "IPR001705 (25%) IPR011332 (25%) IPR018264 (25%)" "Large ribosomal subunit protein bL33 (25%) Zinc-binding ribosomal protein (25%) Large ribosomal subunit protein bL33, conserved site (25%)" NYGDTLLEDSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20%) GO:0022627 (20%) "GO:0003729 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) cytosolic small ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001351 (11.2%) IPR004044 (11.2%) IPR004087 (11.2%)" "Small ribosomal subunit protein uS3, C-terminal (11.2%) K Homology domain, type 2 (11.2%) K Homology domain (11.2%)" SWDRVNEALEKDEIIK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.1%) "GO:0022627 (23.3%) GO:1990904 (1.3%) GO:0005737 (0.9%)" "GO:0003729 (24.6%) GO:0003735 (24.6%) GO:0004654 (0.4%)" translation (24.1%) "cytosolic small ribosomal subunit (23.3%) ribonucleoprotein complex (1.3%) cytoplasm (0.9%)" "mRNA binding (24.6%) structural constituent of ribosome (24.6%) polyribonucleotide nucleotidyltransferase activity (0.4%)" "IPR003029 (23.8%) IPR012340 (23.8%) IPR035104 (23.8%)" "S1 domain (23.8%) Nucleic acid-binding, OB-fold (23.8%) Ribosomal protein S1-like (23.8%)" IMDMATELGAPVIGLNDSGGAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (24%) GO:0009317 (24%) "GO:0003989 (24%) GO:0004658 (24%) GO:0016740 (4%)" carbon fixation (24%) acetyl-CoA carboxylase complex (24%) "acetyl-CoA carboxylase activity (24%) propionyl-CoA carboxylase activity (24%) transferase activity (4%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" YSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAK root "4.2.1.11 (99.8%) 6.3.4.2 (0.2%)" "phosphopyruvate hydratase (99.8%) CTP synthase (glutamine hydrolyzing) (0.2%)" "GO:0006096 (16.7%) GO:0006396 (0%) GO:0006401 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" "glycolytic process (16.7%) RNA processing (0%) RNA catabolic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.7%) IPR020810 (16.7%) IPR036849 (16.7%)" "Enolase (16.7%) Enolase, C-terminal TIM barrel domain (16.7%) Enolase-like, C-terminal domain superfamily (16.7%)" TKPHVNVGTIGHVDHGKTTLTAAITTVLAK Bacteria Bacteria "3.6.5.3 (99.9%) 1.97.1.4 (0.1%)" "protein-synthesizing GTPase (99.9%) [formate-C-acetyltransferase]-activating enzyme (0.1%)" "GO:0006414 (0.1%) GO:0046677 (0%)" "GO:0005829 (18.7%) GO:0032045 (6.9%) GO:0005886 (0.7%)" "GO:0003746 (19.8%) GO:0003924 (19.6%) GO:0005525 (19.6%)" "translational elongation (0.1%) response to antibiotic (0%)" "cytosol (18.7%) guanyl-nucleotide exchange factor complex (6.9%) plasma membrane (0.7%)" "translation elongation factor activity (19.8%) GTPase activity (19.6%) GTP binding (19.6%)" "IPR000795 (13.7%) IPR050055 (13.7%) IPR027417 (13.7%)" "Translational (tr)-type GTP-binding domain (13.7%) Elongation factor Tu GTPase (13.7%) P-loop containing nucleoside triphosphate hydrolase (13.7%)" SAICFEAQHFPDTPNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.1.3.3 (96.4%) 5.1.3.- (3.6%)" "aldose 1-epimerase (96.4%) Acting on carbohydrates and derivatives (3.6%)" "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (20%) IPR011013 (20%) IPR014718 (20%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (20%) Galactose mutarotase-like domain superfamily (20%) Glycoside hydrolase-type carbohydrate-binding (20%)" QLQELGIQPDVLVLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.8%) GO:0044210 (11.8%)" "GO:0005829 (11.8%) GO:0097268 (11.8%)" "GO:0003883 (11.8%) GO:0005524 (11.8%) GO:0042802 (11.8%)" "pyrimidine nucleobase biosynthetic process (11.8%) 'de novo' CTP biosynthetic process (11.8%)" "cytosol (11.8%) cytoophidium (11.8%)" "CTP synthase activity (11.8%) ATP binding (11.8%) identical protein binding (11.8%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" CDSLIYNSNDNIVVLPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.13 (100%) mannose-1-phosphate guanylyltransferase (100%) GO:0009298 (30.4%) "GO:0004475 (30.4%) GO:0005525 (30.4%) GO:0008928 (4.3%)" GDP-mannose biosynthetic process (30.4%) "mannose-1-phosphate guanylyltransferase (GTP) activity (30.4%) GTP binding (30.4%) mannose-1-phosphate guanylyltransferase (GDP) activity (4.3%)" "IPR005835 (25%) IPR029044 (25%) IPR049577 (25%)" "Nucleotidyl transferase domain (25%) Nucleotide-diphospho-sugar transferases (25%) GDP-mannose pyrophosphorylase, N-terminal domain (25%)" EVLKEADPELQIVAFKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0005737 (48.4%) GO:0003746 (51.6%) cytoplasm (48.4%) translation elongation factor activity (51.6%) "IPR001816 (20.5%) IPR014039 (20.5%) IPR036402 (20.5%)" "Translation elongation factor EFTs/EF1B (20.5%) Translation elongation factor EFTs/EF1B, dimerisation (20.5%) Elongation factor Ts, dimerisation domain superfamily (20.5%)" VLNDKWGITDGLMTTVHSTTATQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0006006 (24.9%) "GO:0050661 (24.9%) GO:0051287 (24.9%) GO:0004365 (13.9%)" glucose metabolic process (24.9%) "NADP binding (24.9%) NAD binding (24.9%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (13.9%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" KGEDVVNKNYAAVDRGGEYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (72.5%) 1.2.7.- (22.5%) 1.2.1.51 (5%)" "pyruvate synthase (72.5%) With an iron-sulfur protein as acceptor (22.5%) pyruvate dehydrogenase (NADP(+)) (5%)" "GO:0006979 (14.7%) GO:0022900 (14.6%) GO:0044281 (11.6%)" "GO:0005506 (14.6%) GO:0051539 (14.6%) GO:0030976 (14.5%)" "response to oxidative stress (14.7%) electron transport chain (14.6%) small molecule metabolic process (11.6%)" "iron ion binding (14.6%) 4 iron, 4 sulfur cluster binding (14.6%) thiamine pyrophosphate binding (14.5%)" "IPR002869 (7.8%) IPR050722 (7.8%) IPR011895 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%) Pyruvate-flavodoxin oxidoreductase (7.7%)" LSKENAEIYASLPEGVAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" VSDPKEVVELDQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.6%) "GO:0022627 (23.8%) GO:0005840 (1.3%) GO:1990904 (0.8%)" "GO:0003729 (24.6%) GO:0003735 (24.6%) GO:0004654 (0.2%)" translation (24.6%) "cytosolic small ribosomal subunit (23.8%) ribosome (1.3%) ribonucleoprotein complex (0.8%)" "mRNA binding (24.6%) structural constituent of ribosome (24.6%) polyribonucleotide nucleotidyltransferase activity (0.2%)" "IPR003029 (24.9%) IPR012340 (24.9%) IPR035104 (24.9%)" "S1 domain (24.9%) Nucleic acid-binding, OB-fold (24.9%) Ribosomal protein S1-like (24.9%)" VILNPAPAQPLSAALLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.7.1.15 (88.9%) 2.7.1.229 (11.1%)" "ribokinase (88.9%) deoxyribokinase (11.1%)" "GO:0019303 (17.8%) GO:0006014 (2.2%)" GO:0005829 (20%) "GO:0004747 (20%) GO:0005524 (20%) GO:0046872 (20%)" "D-ribose catabolic process (17.8%) D-ribose metabolic process (2.2%)" cytosol (20%) "ribokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR002139 (20%) IPR002173 (20%) IPR011611 (20%)" "Ribokinase/fructokinase (20%) Carbohydrate/purine kinase, PfkB, conserved site (20%) Carbohydrate kinase PfkB (20%)" EAGVQEADFLANVDKLSEDAFDDQCTGANPR root "1.1.1.1 (64.7%) 1.2.1.10 (35.3%)" "alcohol dehydrogenase (64.7%) acetaldehyde dehydrogenase (acetylating) (35.3%)" "GO:0015976 (18.3%) GO:0006066 (18.2%) GO:0006115 (0.1%)" "GO:0005829 (0.3%) GO:0016020 (0.1%)" "GO:0046872 (20.3%) GO:0008774 (19.1%) GO:0004022 (16.9%)" "carbon utilization (18.3%) alcohol metabolic process (18.2%) ethanol biosynthetic process (0.1%)" "cytosol (0.3%) membrane (0.1%)" "metal ion binding (20.3%) acetaldehyde dehydrogenase (acetylating) activity (19.1%) alcohol dehydrogenase (NAD+) activity (16.9%)" "IPR039697 (10.5%) IPR056798 (10.4%) IPR018211 (10.3%)" "Iron-type alcohol dehydrogenase-like (10.5%) Fe-containing alcohol dehydrogenase-like, C-terminal (10.4%) Alcohol dehydrogenase, iron-type, conserved site (10.3%)" ALYNIIPEKLTINVSHLGLGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" QFPNIDNAYMELGTNR root "GO:0006865 (22.6%) GO:0006868 (0%) GO:1903803 (0%)" "GO:0016020 (25.6%) GO:0030288 (25.2%) GO:0042597 (0.6%)" "GO:0015276 (25.6%) GO:0016597 (0.1%) GO:0016787 (0%)" "amino acid transport (22.6%) glutamine transport (0%) L-glutamine import across plasma membrane (0%)" "membrane (25.6%) outer membrane-bounded periplasmic space (25.2%) periplasmic space (0.6%)" "ligand-gated monoatomic ion channel activity (25.6%) amino acid binding (0.1%) hydrolase activity (0%)" "IPR001638 (25.4%) IPR001320 (25%) IPR044132 (24.9%)" "Solute-binding protein family 3/N-terminal domain of MltF (25.4%) Ionotropic glutamate receptor, C-terminal (25%) Glutamine-binding periplasmic protein GlnH, type 2 periplasmic binding protein fold (24.9%)" LEEDEDVQNVYTNMKPADNEGEE Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006355 (33.3%) GO:0005829 (33.3%) GO:0003677 (33.3%) regulation of DNA-templated transcription (33.3%) cytosol (33.3%) DNA binding (33.3%) "IPR002876 (16.7%) IPR017856 (16.7%) IPR026564 (16.7%)" "Transcriptional regulator TACO1-like (16.7%) Integrase-like, N-terminal (16.7%) Transcriptional regulator TACO1-like, domain 3 (16.7%)" VAPALSDKTFWLYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) GO:0009263 (25%) GO:0005971 (25%) "GO:0004748 (25%) GO:0005524 (25%)" deoxyribonucleotide biosynthetic process (25%) ribonucleoside-diphosphate reductase complex (25%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (25%) ATP binding (25%)" "IPR000788 (16.7%) IPR005144 (16.7%) IPR008926 (16.7%)" "Ribonucleotide reductase large subunit, C-terminal (16.7%) ATP-cone domain (16.7%) Ribonucleotide reductase R1 subunit, N-terminal (16.7%)" GGALVDFPDFTR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.2.1.49 (75%) 3.2.1.- (25%)" "alpha-N-acetylgalactosaminidase (75%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (25%)" "GO:0000166 (50%) GO:0016798 (46.6%) GO:0008456 (3.4%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (46.6%) alpha-N-acetylgalactosaminidase activity (3.4%)" "IPR000683 (17.6%) IPR006311 (17.6%) IPR036291 (17.6%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (17.6%) Twin-arginine translocation pathway, signal sequence (17.6%) NAD(P)-binding domain superfamily (17.6%)" SIPSGIFQGGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (16.2%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (16.2%)" "IPR001114 (14.4%) IPR027417 (14.4%) IPR042109 (14.4%)" "Adenylosuccinate synthetase (14.4%) P-loop containing nucleoside triphosphate hydrolase (14.4%) Adenylosuccinate synthetase, domain 1 (14.4%)" HYKSPAFDSIMAETLK root "GO:0015833 (20.7%) GO:0015031 (18.5%) GO:0006857 (0.2%)" "GO:0030288 (20.6%) GO:0043190 (18.2%) GO:0005886 (0.2%)" "GO:1904680 (20.7%) GO:1900750 (0.2%)" "peptide transport (20.7%) protein transport (18.5%) oligopeptide transport (0.2%)" "outer membrane-bounded periplasmic space (20.6%) ATP-binding cassette (ABC) transporter complex (18.2%) plasma membrane (0.2%)" "peptide transmembrane transporter activity (20.7%) oligopeptide binding (0.2%)" "IPR039424 (26.5%) IPR000914 (26.3%) IPR030678 (23.3%)" "Solute-binding protein family 5 (26.5%) Solute-binding protein family 5 domain (26.3%) Peptide/nickel binding protein, MppA-type (23.3%)" GSQFRQPLIEFSGACAGCGETPYIK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae "1.2.7.1 (92.3%) 1.2.7.- (7.7%)" "pyruvate synthase (92.3%) With an iron-sulfur protein as acceptor (7.7%)" "GO:0006979 (16.7%) GO:0022900 (16.7%)" "GO:0005506 (16.7%) GO:0030976 (16.7%) GO:0051539 (16.7%)" "response to oxidative stress (16.7%) electron transport chain (16.7%)" "iron ion binding (16.7%) thiamine pyrophosphate binding (16.7%) 4 iron, 4 sulfur cluster binding (16.7%)" "IPR002869 (7.8%) IPR009014 (7.8%) IPR011766 (7.8%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.8%) Thiamine pyrophosphate enzyme, TPP-binding (7.8%)" MYPNDEVANLNAAAVSLTKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" KLTEQYLETVTK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" WMFPLAEKEMVR Bacteria Bacteria 2.3.1.234 (100%) N(6)-L-threonylcarbamoyladenine synthase (100%) "GO:0002949 (38.6%) GO:0006508 (4.5%)" GO:0005829 (38.6%) "GO:0016740 (6.8%) GO:0016746 (6.8%) GO:0008233 (4.5%)" "tRNA threonylcarbamoyladenosine modification (38.6%) proteolysis (4.5%)" cytosol (38.6%) "transferase activity (6.8%) acyltransferase activity (6.8%) peptidase activity (4.5%)" "IPR000905 (33.3%) IPR022496 (33.3%) IPR043129 (33.3%)" "Gcp-like domain (33.3%) tRNA threonylcarbamoyl adenosine modification protein TsaB (33.3%) ATPase, nucleotide binding domain (33.3%)" LTLNYEIIGKSDEEIANLAATDPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" MWIHGLQQLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.4 (100%) L-arabinose isomerase (100%) GO:0019569 (25.1%) GO:0005829 (25.1%) "GO:0008733 (25.1%) GO:0030145 (24.8%)" L-arabinose catabolic process to D-xylulose 5-phosphate (25.1%) cytosol (25.1%) "L-arabinose isomerase activity (25.1%) manganese ion binding (24.8%)" "IPR003762 (14.4%) IPR009015 (14.4%) IPR038583 (14.4%)" "L-arabinose isomerase (14.4%) L-fucose isomerase, N-terminal/central domain superfamily (14.4%) L-arabinose isomerase, N-terminal domain superfamily (14.4%)" YATQQAILEDIVSSLHVQGFRK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.5.2.10 (100%) creatininase (100%) GO:0009231 (31.8%) "GO:0016811 (31.8%) GO:0046872 (31.8%) GO:0047789 (4.5%)" riboflavin biosynthetic process (31.8%) "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (31.8%) metal ion binding (31.8%) creatininase activity (4.5%)" "IPR003785 (50%) IPR024087 (50%)" "Creatininase/formamide hydrolase (50%) Creatininase-like superfamily (50%)" AVNYSGAGTIEFLVDKNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "6.3.4.14 (86.5%) 6.4.1.2 (13.5%)" "biotin carboxylase (86.5%) acetyl-CoA carboxylase (13.5%)" GO:2001295 (15.1%) "GO:0005524 (23.5%) GO:0046872 (23.5%) GO:0003989 (16.8%)" malonyl-CoA biosynthetic process (15.1%) "ATP binding (23.5%) metal ion binding (23.5%) acetyl-CoA carboxylase activity (16.8%)" "IPR005479 (13.3%) IPR011761 (13.3%) IPR011764 (13.3%)" "Carbamoyl phosphate synthase, ATP-binding domain (13.3%) ATP-grasp fold (13.3%) Biotin carboxylation domain (13.3%)" FGGPSVKDEK root 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (48.5%) GO:1903810 (0.3%)" "GO:0030288 (49.1%) GO:0030313 (0.9%) GO:0016020 (0.3%)" "GO:0016597 (0.3%) GO:0016787 (0.3%)" "amino acid transport (48.5%) L-histidine import across plasma membrane (0.3%)" "outer membrane-bounded periplasmic space (49.1%) cell envelope (0.9%) membrane (0.3%)" "amino acid binding (0.3%) hydrolase activity (0.3%)" "IPR001638 (34.9%) IPR005768 (32.7%) IPR018313 (32.5%)" "Solute-binding protein family 3/N-terminal domain of MltF (34.9%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (32.7%) Solute-binding protein family 3, conserved site (32.5%)" TLVPQIIEELKK root 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (19.9%) "GO:0005737 (19.2%) GO:0005739 (0.8%)" "GO:0004494 (19.9%) GO:0031419 (19.9%) GO:0046872 (19.9%)" propionate metabolic process, methylmalonyl pathway (19.9%) "cytoplasm (19.2%) mitochondrion (0.8%)" "methylmalonyl-CoA mutase activity (19.9%) cobalamin binding (19.9%) metal ion binding (19.9%)" "IPR006158 (16.7%) IPR006159 (16.7%) IPR036724 (16.7%)" "Cobalamin (vitamin B12)-binding domain (16.7%) Methylmalonyl-CoA mutase, C-terminal (16.7%) Cobalamin-binding domain superfamily (16.7%)" KIDEIFDLRPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.5.1.6 (100%) methionine adenosyltransferase (100%) "GO:0006556 (17%) GO:0006730 (17%)" GO:0005737 (14.9%) "GO:0004478 (17%) GO:0005524 (17%) GO:0000287 (14.7%)" "S-adenosylmethionine biosynthetic process (17%) one-carbon metabolic process (17%)" cytoplasm (14.9%) "methionine adenosyltransferase activity (17%) ATP binding (17%) magnesium ion binding (14.7%)" "IPR002133 (16.8%) IPR022630 (16.8%) IPR022631 (16.8%)" "S-adenosylmethionine synthetase (16.8%) S-adenosylmethionine synthetase, C-terminal (16.8%) S-adenosylmethionine synthetase, conserved site (16.8%)" GIHTLEHLFAGFMR root 4.4.1.21 (100%) S-ribosylhomocysteine lyase (100%) "GO:0009372 (33%) GO:0019284 (0.1%) GO:2000145 (0%)" GO:0005829 (0.1%) "GO:0005506 (33%) GO:0043768 (33%) GO:0016829 (0.4%)" "quorum sensing (33%) L-methionine salvage from S-adenosylmethionine (0.1%) regulation of cell motility (0%)" cytosol (0.1%) "iron ion binding (33%) S-ribosylhomocysteine lyase activity (33%) lyase activity (0.4%)" "IPR003815 (33.3%) IPR011249 (33.3%) IPR037005 (33.3%)" "S-ribosylhomocysteinase (LuxS) (33.3%) Metalloenzyme, LuxS/M16 peptidase-like (33.3%) S-ribosylhomocysteinase (LuxS) superfamily (33.3%)" GSPTCELVYK Pseudomonadati Bacteria Pseudomonadati "1.3.8.1 (54.3%) 1.3.99.- (31.4%) 1.3.8.- (11.4%)" "short-chain acyl-CoA dehydrogenase (54.3%) With other acceptors (31.4%) With a flavin as acceptor (11.4%)" "GO:0050660 (49.8%) GO:0003995 (31.5%) GO:0016627 (15.8%)" "flavin adenine dinucleotide binding (49.8%) acyl-CoA dehydrogenase activity (31.5%) oxidoreductase activity, acting on the CH-CH group of donors (15.8%)" "IPR009075 (9.4%) IPR052166 (9.4%) IPR006091 (9.4%)" "Acyl-CoA dehydrogenase/oxidase, C-terminal (9.4%) Diverse substrate specificity acyl-CoA dehydrogenase (9.4%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.4%)" LNNTLAENREGNTTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (52.4%) IPR019734 (47.6%)" "Tetratricopeptide-like helical domain superfamily (52.4%) Tetratricopeptide repeat (47.6%)" GVTELSVSQVEPIKEVEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.24.- (100%) Metalloendopeptidases (100%) GO:0016485 (25.2%) GO:0005886 (25.2%) "GO:0004222 (25.2%) GO:0046872 (24.3%)" protein processing (25.2%) plasma membrane (25.2%) "metalloendopeptidase activity (25.2%) metal ion binding (24.3%)" "IPR000718 (20.2%) IPR008753 (20.2%) IPR024079 (20.2%)" "Peptidase M13 (20.2%) Peptidase M13, N-terminal domain (20.2%) Metallopeptidase, catalytic domain superfamily (20.2%)" FIEQDPEGQYGLEAAFR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.8%) GO:0006352 (0%) GO:0006412 (0%)" "GO:0000428 (20.2%) GO:0005829 (0%) GO:0000345 (0%)" "GO:0003899 (19.9%) GO:0003677 (19.9%) GO:0032549 (19.6%)" "DNA-templated transcription (19.8%) DNA-templated transcription initiation (0%) translation (0%)" "DNA-directed RNA polymerase complex (20.2%) cytosol (0%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA-directed RNA polymerase activity (19.9%) DNA binding (19.9%) ribonucleoside binding (19.6%)" "IPR007644 (8.1%) IPR015712 (8%) IPR007642 (8%)" "RNA polymerase, beta subunit, protrusion (8.1%) DNA-directed RNA polymerase, subunit 2 (8%) RNA polymerase Rpb2, domain 2 (8%)" VTDKDIQINIFEVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0022627 (20%) GO:0005840 (0.3%)" "GO:0003735 (20%) GO:0019843 (20%) GO:0003729 (19.7%)" translation (20%) "cytosolic small ribosomal subunit (20%) ribosome (0.3%)" "structural constituent of ribosome (20%) rRNA binding (20%) mRNA binding (19.7%)" "IPR001351 (11.2%) IPR004044 (11.2%) IPR004087 (11.2%)" "Small ribosomal subunit protein uS3, C-terminal (11.2%) K Homology domain, type 2 (11.2%) K Homology domain (11.2%)" TFNMIVLGGLLK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0016903 (95.5%) GO:0019164 (4.5%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (95.5%) pyruvate synthase activity (4.5%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" KLVIDPLYLGCLIIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0008959 (55.6%) GO:0016407 (44.4%)" "phosphate acetyltransferase activity (55.6%) acetyltransferase activity (44.4%)" "IPR002505 (16.7%) IPR004614 (16.7%) IPR012147 (16.7%)" "Phosphate acetyl/butaryl transferase (16.7%) Phosphate acetyltransferase (16.7%) Phosphate acetyl/butyryltransferase (16.7%)" IKTVSESPIPTDGIPNVTILDGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016810 (100%) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (100%) "IPR006680 (25%) IPR011059 (25%) IPR032466 (25%)" "Amidohydrolase-related (25%) Metal-dependent hydrolase, composite domain superfamily (25%) Metal-dependent hydrolase (25%)" ALVHYAQVTGYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.16.1.1 (100%) mercury(II) reductase (100%) "GO:0003955 (30%) GO:0016668 (30%) GO:0050660 (30%)" "NAD(P)H dehydrogenase (quinone) activity (30%) oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (30%) flavin adenine dinucleotide binding (30%)" "IPR001100 (16.7%) IPR004099 (16.7%) IPR012999 (16.7%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (16.7%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (16.7%) Pyridine nucleotide-disulphide oxidoreductase, class I, active site (16.7%)" ARNEQDGGDLVYFQGHISPGVYAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 1.2.4.1 (100%) pyruvate dehydrogenase (acetyl-transferring) (100%) GO:0042867 (0.3%) "GO:0005829 (0.3%) GO:0016020 (0.3%) GO:0045254 (0.3%)" "GO:0000287 (45.1%) GO:0004739 (38.6%) GO:0016491 (13.5%)" pyruvate catabolic process (0.3%) "cytosol (0.3%) membrane (0.3%) pyruvate dehydrogenase complex (0.3%)" "magnesium ion binding (45.1%) pyruvate dehydrogenase (acetyl-transferring) activity (38.6%) oxidoreductase activity (13.5%)" "IPR029061 (13.4%) IPR051157 (13.4%) IPR005474 (12.7%)" "Thiamin diphosphate-binding fold (13.4%) Pyruvate Dehydrogenase/Transketolase (13.4%) Transketolase, N-terminal (12.7%)" EMDLFMFSDTVGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.6%) GO:0005737 (16.3%) "GO:0000049 (16.6%) GO:0004829 (16.6%) GO:0005524 (16.6%)" threonyl-tRNA aminoacylation (16.6%) cytoplasm (16.3%) "tRNA binding (16.6%) threonine-tRNA ligase activity (16.6%) ATP binding (16.6%)" "IPR006195 (7.8%) IPR012947 (7.8%) IPR018163 (7.8%)" "Aminoacyl-tRNA synthetase, class II (7.8%) Threonyl/alanyl tRNA synthetase, SAD (7.8%) Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily (7.8%)" IGTGPSSSHTMGPR root 4.3.1.17 (100%) L-serine ammonia-lyase (100%) GO:0006094 (25%) "GO:0003941 (25%) GO:0046872 (25%) GO:0051539 (25%)" gluconeogenesis (25%) "L-serine ammonia-lyase activity (25%) metal ion binding (25%) 4 iron, 4 sulfur cluster binding (25%)" "IPR005131 (20.1%) IPR029009 (20.1%) IPR051318 (20.1%)" "Serine dehydratase beta chain (20.1%) Allosteric substrate binding domain superfamily (20.1%) Iron-sulphur-dependent L-serine dehydratase (20.1%)" IKEELANMNYLVEDWGGK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.4%) IPR000795 (8.4%) IPR005225 (8.4%)" "Translation initiation factor IF-2, bacterial-like (8.4%) Translational (tr)-type GTP-binding domain (8.4%) Small GTP-binding domain (8.4%)" GTHFNPVDLVCAVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" TTFAGLTLKNPVIISSSGLTNSAAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.3.1.1 (94.7%) 1.3.98.1 (5.3%)" "dihydrouracil dehydrogenase (NAD(+)) (94.7%) dihydroorotate oxidase (fumarate) (5.3%)" "GO:0006210 (13.5%) GO:0006212 (13.5%) GO:0044205 (11.9%)" GO:0005737 (14.3%) "GO:0002058 (13.5%) GO:0004152 (13.5%) GO:0050661 (13.5%)" "thymine catabolic process (13.5%) uracil catabolic process (13.5%) 'de novo' UMP biosynthetic process (11.9%)" cytoplasm (14.3%) "uracil binding (13.5%) dihydroorotate dehydrogenase activity (13.5%) NADP binding (13.5%)" "IPR005720 (32.8%) IPR012135 (32.8%) IPR013785 (32.8%)" "Dihydroorotate dehydrogenase, catalytic (32.8%) Dihydroorotate dehydrogenase, class 1/ 2 (32.8%) Aldolase-type TIM barrel (32.8%)" SDPYFVNDETHVK Bacteria Bacteria 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0000166 (25%) GO:0047850 (25%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "nucleotide binding (25%) diaminopimelate dehydrogenase activity (25%)" "IPR000683 (25%) IPR010190 (25%) IPR032094 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Diaminopimelate dehydrogenase, Ddh (25%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25%)" IIPPVVFSLEEALEYIKEDEYVEVTPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0009409 (10%) GO:0010467 (9.5%) GO:0000027 (9%)" "GO:0005829 (10.5%) GO:1990904 (10.5%)" "GO:0003924 (10.5%) GO:0005525 (10.5%) GO:0000049 (9%)" "response to cold (10%) gene expression (9.5%) ribosomal large subunit assembly (9%)" "cytosol (10.5%) ribonucleoprotein complex (10.5%)" "GTPase activity (10.5%) GTP binding (10.5%) tRNA binding (9%)" "IPR000640 (7.1%) IPR035647 (7.1%) IPR035651 (7.1%)" "Elongation factor EFG, domain V-like (7.1%) EF-G domain III/V-like (7.1%) BipA, domain V (7.1%)" QIVTLTYPHIGNVGTNDADEESSQVHAQGLVIR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006526 (14.6%) GO:0006207 (14.2%) GO:0006541 (14.2%)" "GO:0005951 (0.6%) GO:0005737 (0.1%) GO:0005829 (0.1%)" "GO:0005524 (16%) GO:0004088 (15.4%) GO:0004359 (7.3%)" "L-arginine biosynthetic process (14.6%) 'de novo' pyrimidine nucleobase biosynthetic process (14.2%) glutamine metabolic process (14.2%)" "carbamoyl-phosphate synthase complex (0.6%) cytoplasm (0.1%) cytosol (0.1%)" "ATP binding (16%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (15.4%) glutaminase activity (7.3%)" "IPR002474 (15.4%) IPR036480 (15.4%) IPR029062 (14.4%)" "Carbamoyl-phosphate synthase small subunit, N-terminal domain (15.4%) Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily (15.4%) Class I glutamine amidotransferase-like (14.4%)" FTPEQCHIDPATGR Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (25%) GO:0030388 (25%)" "GO:0004332 (25%) GO:0008270 (25%)" "glycolytic process (25%) fructose 1,6-bisphosphate metabolic process (25%)" "fructose-bisphosphate aldolase activity (25%) zinc ion binding (25%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" ILDPRPWLYQTPEQILIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" IGDIGYAIQQYCESHSYGVVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.11.18 (100%) methionyl aminopeptidase (100%) GO:0006508 (20.1%) GO:0005829 (20.1%) "GO:0004239 (20.1%) GO:0070006 (20.1%) GO:0046914 (19.7%)" proteolysis (20.1%) cytosol (20.1%) "initiator methionyl aminopeptidase activity (20.1%) metalloaminopeptidase activity (20.1%) transition metal ion binding (19.7%)" "IPR000994 (25%) IPR001714 (25%) IPR002467 (25%)" "Peptidase M24 (25%) Peptidase M24, methionine aminopeptidase (25%) Peptidase M24A, methionine aminopeptidase, subfamily 1 (25%)" AASSHTGAIASSDSAVEALFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.- (66.7%) 6.2.1.34 (33.3%)" "Transferring groups other than amino-acyl groups (66.7%) trans-feruloyl-CoA synthase (33.3%)" "GO:0005524 (34.8%) GO:0046872 (28.1%) GO:0043758 (25.6%)" "ATP binding (34.8%) metal ion binding (28.1%) acetate-CoA ligase (ADP-forming) activity (25.6%)" "IPR016102 (15.4%) IPR032875 (15.4%) IPR003781 (15.3%)" "Succinyl-CoA synthetase-like (15.4%) Succinyl-CoA synthetase-like, flavodoxin domain (15.4%) CoA-binding (15.3%)" VLNDDSVDPEMGFDTHPHQNMEVISIPLKGYLR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.13.11.24 (100%) quercetin 2,3-dioxygenase (100%) "GO:0046872 (83.3%) GO:0008127 (16.7%)" "metal ion binding (83.3%) quercetin 2,3-dioxygenase activity (16.7%)" "IPR003829 (20%) IPR011051 (20%) IPR012093 (20%)" "Pirin, N-terminal domain (20%) RmlC-like cupin domain superfamily (20%) Pirin (20%)" VAGYGVTDLEKGNLAAAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016787 (100%) hydrolase activity (100%) "IPR001466 (20%) IPR005180 (20%) IPR012338 (20%)" "Beta-lactamase-related (20%) Domain of unknown function DUF302 (20%) Beta-lactamase/transpeptidase-like (20%)" ITGVIPVDLAIEQMKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (75%) 1.2.7.- (25%)" "pyruvate synthase (75%) With an iron-sulfur protein as acceptor (25%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (13.2%)" "GO:0005506 (14.5%) GO:0051539 (14.5%) GO:0030976 (14.2%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (13.2%)" "iron ion binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%) thiamine pyrophosphate binding (14.2%)" "IPR002869 (7.8%) IPR011895 (7.8%) IPR017896 (7.8%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Pyruvate-flavodoxin oxidoreductase (7.8%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (7.8%)" GTQAQFIMEK root "2.7.4.3 (99.9%) 2.7.4.- (0.1%)" "adenylate kinase (99.9%) Phosphotransferases with a phosphate group as acceptor (0.1%)" "GO:0044209 (22.8%) GO:0009123 (0.1%) GO:0009132 (0.1%)" "GO:0005737 (25.4%) GO:0005829 (0.1%) GO:0005758 (0%)" "GO:0005524 (25.4%) GO:0004017 (25.4%) GO:0016301 (0.3%)" "AMP salvage (22.8%) nucleoside monophosphate metabolic process (0.1%) nucleoside diphosphate metabolic process (0.1%)" "cytoplasm (25.4%) cytosol (0.1%) mitochondrial intermembrane space (0%)" "ATP binding (25.4%) AMP kinase activity (25.4%) kinase activity (0.3%)" "IPR027417 (20.1%) IPR000850 (20.1%) IPR033690 (19.9%)" "P-loop containing nucleoside triphosphate hydrolase (20.1%) Adenylate kinase/UMP-CMP kinase (20.1%) Adenylate kinase, conserved site (19.9%)" VKELIQTNPAQASEEAAQLLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0051301 (50%) GO:0009579 (50%) cell division (50%) thylakoid (50%) "IPR011990 (38.2%) IPR019734 (38.2%) IPR051685 (23.6%)" "Tetratricopeptide-like helical domain superfamily (38.2%) Tetratricopeptide repeat (38.2%) Ycf3/AcsC/BcsC/TPR Multifunctional (23.6%)" TLASYADCYINDAFGTAHRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%)" GO:0005829 (16.5%) "GO:0004618 (16.5%) GO:0005524 (16.5%) GO:0043531 (16.5%)" "gluconeogenesis (16.5%) glycolytic process (16.5%)" cytosol (16.5%) "phosphoglycerate kinase activity (16.5%) ATP binding (16.5%) ADP binding (16.5%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" KWNPSMAPYIFMER Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (32.8%) "GO:0022627 (32.8%) GO:0005840 (1.5%)" GO:0003735 (32.8%) translation (32.8%) "cytosolic small ribosomal subunit (32.8%) ribosome (1.5%)" structural constituent of ribosome (32.8%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" GAEFTRIPNDEKDLTPEQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006355 (33.3%) GO:0005829 (33.3%) GO:0003677 (33.3%) regulation of DNA-templated transcription (33.3%) cytosol (33.3%) DNA binding (33.3%) "IPR002876 (16.7%) IPR017856 (16.7%) IPR026564 (16.7%)" "Transcriptional regulator TACO1-like (16.7%) Integrase-like, N-terminal (16.7%) Transcriptional regulator TACO1-like, domain 3 (16.7%)" MAEYGTNVVGGTSPGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.2.1.5 (96.3%) 6.2.1.- (3.7%)" "succinate--CoA ligase (ADP-forming) (96.3%) Acid--thiol ligases (3.7%)" GO:0006099 (19.8%) GO:0009361 (19.8%) "GO:0000166 (19.8%) GO:0004775 (19.8%) GO:0004776 (19.8%)" tricarboxylic acid cycle (19.8%) succinate-CoA ligase complex (ADP-forming) (19.8%) "nucleotide binding (19.8%) succinate-CoA ligase (ADP-forming) activity (19.8%) succinate-CoA ligase (GDP-forming) activity (19.8%)" "IPR003781 (14.3%) IPR005810 (14.3%) IPR005811 (14.3%)" "CoA-binding (14.3%) Succinyl-CoA ligase, alpha subunit (14.3%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.3%)" KVGDVAEITIPQGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006354 (20.2%) GO:0032784 (20.2%)" "GO:0003677 (20.2%) GO:0070063 (20.2%) GO:0003746 (19.4%)" "DNA-templated transcription elongation (20.2%) regulation of DNA-templated transcription elongation (20.2%)" "DNA binding (20.2%) RNA polymerase binding (20.2%) translation elongation factor activity (19.4%)" "IPR001437 (12.5%) IPR006359 (12.5%) IPR018151 (12.5%)" "Transcription elongation factor, GreA/GreB, C-terminal (12.5%) Transcription elongation factor GreA (12.5%) Transcription elongation factor, GreA/GreB, conserved site (12.5%)" VREGKGDFGYNAR Bacteroidota Bacteria Pseudomonadati Bacteroidota 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.9%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (15.1%) GO:1990220 (0.1%)" "GO:0005524 (17.9%) GO:0140662 (17.9%) GO:0016853 (15.8%)" "protein refolding (17.9%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (15.1%) GroEL-GroES complex (0.1%)" "ATP binding (17.9%) ATP-dependent protein folding chaperone (17.9%) isomerase activity (15.8%)" "IPR001844 (17%) IPR002423 (17%) IPR027413 (16.8%)" "Chaperonin Cpn60/GroEL (17%) Chaperonin Cpn60/GroEL/TCP-1 family (17%) GroEL-like equatorial domain superfamily (16.8%)" EQTVTVRDPFAEIFGDIFGNGGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.21.- (50%) 3.4.21.107 (50%)" "Serine endopeptidases (50%) peptidase Do (50%)" GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001478 (23.7%) IPR001940 (23.7%) IPR009003 (23.7%)" "PDZ domain (23.7%) Peptidase S1C (23.7%) Peptidase S1, PA clan (23.7%)" AKSEEIEHSNQDLDER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" VLTGDSPFAANALGK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "3.5.1.124 (46.8%) 3.1.2.- (38.8%) 3.5.1.- (9.4%)" "protein deglycase (46.8%) Thiolester hydrolases (38.8%) In linear amides (9.4%)" "GO:0019243 (14.5%) GO:0006281 (13.4%) GO:0030091 (9.1%)" GO:0005737 (14.5%) "GO:0019172 (15.1%) GO:0036524 (13.6%) GO:0008270 (9.1%)" "methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (14.5%) DNA repair (13.4%) protein repair (9.1%)" cytoplasm (14.5%) "glyoxalase III activity (15.1%) protein deglycase activity (13.6%) zinc ion binding (9.1%)" "IPR029062 (33.9%) IPR050325 (32.3%) IPR017283 (30%)" "Class I glutamine amidotransferase-like (33.9%) Protein/nucleic acid deglycase (32.3%) Protein/nucleic acid deglycase HchA (30%)" EVHAFVSEPSYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.2.1 (100%) DNA topoisomerase (100%) GO:0006265 (25.3%) "GO:0003677 (25.3%) GO:0003917 (25.3%) GO:0046872 (24.2%)" DNA topological change (25.3%) "DNA binding (25.3%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25.3%) metal ion binding (24.2%)" "IPR000380 (7.3%) IPR003602 (7.3%) IPR013497 (7.3%)" "DNA topoisomerase, type IA (7.3%) DNA topoisomerase, type IA, DNA-binding domain (7.3%) DNA topoisomerase, type IA, central (7.3%)" LMQDNPSISIELPLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0016787 (100%) hydrolase activity (100%) "IPR001466 (20%) IPR005180 (20%) IPR012338 (20%)" "Beta-lactamase-related (20%) Domain of unknown function DUF302 (20%) Beta-lactamase/transpeptidase-like (20%)" STPKDHGLENLIEGELRPGMK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25.8%) GO:0044205 (25.8%) GO:0006222 (0.2%)" "GO:0004588 (25.8%) GO:0000287 (22.3%) GO:0016757 (0.2%)" "pyrimidine nucleobase biosynthetic process (25.8%) 'de novo' UMP biosynthetic process (25.8%) UMP biosynthetic process (0.2%)" "orotate phosphoribosyltransferase activity (25.8%) magnesium ion binding (22.3%) glycosyltransferase activity (0.2%)" "IPR000836 (25.1%) IPR023031 (25.1%) IPR029057 (25.1%)" "Phosphoribosyltransferase domain (25.1%) Orotate phosphoribosyltransferase (25.1%) Phosphoribosyltransferase-like (25.1%)" LHKEVSVEVPFEVVSE Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000244 (14.3%) IPR009027 (14.3%) IPR020069 (14.3%)" "Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.3%) Large ribosomal subunit protein bL9, C-terminal (14.3%)" HYAHVDCPGHADYVK root "3.6.5.3 (99.9%) 1.97.1.4 (0%) 2.7.11.1 (0%)" "protein-synthesizing GTPase (99.9%) [formate-C-acetyltransferase]-activating enzyme (0%) non-specific serine/threonine protein kinase (0%)" "GO:0070125 (1.9%) GO:0006414 (0%) GO:0009658 (0%)" "GO:0005829 (13.7%) GO:0032045 (7.7%) GO:0005739 (1.9%)" "GO:0003746 (17.3%) GO:0005525 (17.2%) GO:0003924 (17.2%)" "mitochondrial translational elongation (1.9%) translational elongation (0%) chloroplast organization (0%)" "cytosol (13.7%) guanyl-nucleotide exchange factor complex (7.7%) mitochondrion (1.9%)" "translation elongation factor activity (17.3%) GTP binding (17.2%) GTPase activity (17.2%)" "IPR000795 (9.2%) IPR050055 (9.1%) IPR027417 (9.1%)" "Translational (tr)-type GTP-binding domain (9.2%) Elongation factor Tu GTPase (9.1%) P-loop containing nucleoside triphosphate hydrolase (9.1%)" MFTINAEVRK root "GO:0006412 (24.8%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (24.6%) GO:0005840 (0.5%) GO:1990904 (0.2%)" "GO:0003735 (24.8%) GO:0008097 (24.7%) GO:0019843 (0%)" "translation (24.8%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.6%) ribosome (0.5%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (24.8%) 5S rRNA binding (24.7%) rRNA binding (0%)" "IPR011035 (20.1%) IPR020056 (20.1%) IPR029751 (20.1%)" "Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (20.1%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (20.1%) Large ribosomal subunit protein bL25, L25 domain (20.1%)" GSSSGGGYSSGSSSYGSGGR Simiiformes Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Euarchontoglires Primates Haplorrhini Simiiformes "GO:0031424 (8%) GO:0045109 (8%) GO:0003334 (5.6%)" "GO:0005829 (11.2%) GO:0045095 (9.6%) GO:0005615 (7.2%)" "GO:0030280 (8%) GO:0008092 (5.6%) GO:0005200 (0.8%)" "keratinization (8%) intermediate filament organization (8%) keratinocyte development (5.6%)" "cytosol (11.2%) keratin filament (9.6%) extracellular space (7.2%)" "structural constituent of skin epidermis (8%) cytoskeletal protein binding (5.6%) structural constituent of cytoskeleton (0.8%)" "IPR018039 (26.4%) IPR039008 (26.4%) IPR032444 (24.5%)" "Intermediate filament protein, conserved site (26.4%) Intermediate filament, rod domain (26.4%) Keratin type II head (24.5%)" VGELSYEGLELINAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" VIGIDEHLVIPNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.1.25.- (100%) Site-specific endodeoxyribonucleases specific for altered bases (100%) "GO:0006289 (11.3%) GO:0006281 (1.5%)" "GO:0005737 (12.8%) GO:0009380 (11.3%)" "GO:0003677 (12.8%) GO:0004518 (12.8%) GO:0005524 (12.8%)" "nucleotide-excision repair (11.3%) DNA repair (1.5%)" "cytoplasm (12.8%) excinuclease repair complex (11.3%)" "DNA binding (12.8%) nuclease activity (12.8%) ATP binding (12.8%)" "IPR027417 (15.3%) IPR041102 (15.3%) IPR041552 (15.3%)" "P-loop containing nucleoside triphosphate hydrolase (15.3%) UvrA, interaction domain (15.3%) UvrA DNA-binding domain (15.3%)" RLEQVALPMIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.24 (100%) glucose-1-phosphate thymidylyltransferase (100%) "GO:0008879 (50%) GO:0046872 (50%)" "glucose-1-phosphate thymidylyltransferase activity (50%) metal ion binding (50%)" "IPR005835 (33.3%) IPR005907 (33.3%) IPR029044 (33.3%)" "Nucleotidyl transferase domain (33.3%) Glucose-1-phosphate thymidylyltransferase, short form (33.3%) Nucleotide-diphospho-sugar transferases (33.3%)" GSNLVEIVSTCSSGWK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.3 (64.7%) 1.2.7.1 (23.5%) 1.2.-.- (5.9%)" "2-oxoglutarate synthase (64.7%) pyruvate synthase (23.5%) Acting on the aldehyde or oxo group of donors (5.9%)" GO:0044281 (29.3%) "GO:0030976 (34.6%) GO:0016625 (27.7%) GO:0047553 (5.3%)" small molecule metabolic process (29.3%) "thiamine pyrophosphate binding (34.6%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (27.7%) 2-oxoglutarate synthase activity (5.3%)" "IPR029061 (33.5%) IPR051457 (33.5%) IPR011766 (33%)" "Thiamin diphosphate-binding fold (33.5%) 2-oxoacid:ferredoxin oxidoreductase (33.5%) Thiamine pyrophosphate enzyme, TPP-binding (33%)" DLHSGHFGGAVANPINVLCGMLSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.13.- (62.5%) 3.5.1.18 (37.5%)" "Dipeptidases (62.5%) succinyl-diaminopimelate desuccinylase (37.5%)" "GO:0046872 (49.3%) GO:0016787 (39.7%) GO:0009014 (5.5%)" "metal ion binding (49.3%) hydrolase activity (39.7%) succinyl-diaminopimelate desuccinylase activity (5.5%)" "IPR002933 (33.3%) IPR011650 (33.3%) IPR051458 (33.3%)" "Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%) Cytosolic and Metallo Dipeptidase (33.3%)" MSIGLPCYVSATPNGILELLKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.5.4.9 (50%) 1.5.1.5 (49.6%) 6.3.4.3 (0.4%)" "methenyltetrahydrofolate cyclohydrolase (50%) methylenetetrahydrofolate dehydrogenase (NADP(+)) (49.6%) formate--tetrahydrofolate ligase (0.4%)" "GO:0035999 (14.4%) GO:0000105 (14%) GO:0006164 (14%)" GO:0005829 (14.4%) "GO:0004477 (14.4%) GO:0004488 (14.4%) GO:0004329 (0.1%)" "tetrahydrofolate interconversion (14.4%) L-histidine biosynthetic process (14%) purine nucleotide biosynthetic process (14%)" cytosol (14.4%) "methenyltetrahydrofolate cyclohydrolase activity (14.4%) methylenetetrahydrofolate dehydrogenase (NADP+) activity (14.4%) formate-tetrahydrofolate ligase activity (0.1%)" "IPR000672 (16.7%) IPR020631 (16.7%) IPR020630 (16.6%)" "Tetrahydrofolate dehydrogenase/cyclohydrolase (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (16.6%)" VVAGVANALAHK root "GO:0042744 (7.6%) GO:0030185 (0.4%) GO:0042542 (0.4%)" "GO:0005833 (9%) GO:0031838 (7.7%) GO:0072562 (7.3%)" "GO:0019825 (9.2%) GO:0020037 (9.2%) GO:0046872 (9.2%)" "hydrogen peroxide catabolic process (7.6%) nitric oxide transport (0.4%) response to hydrogen peroxide (0.4%)" "hemoglobin complex (9%) haptoglobin-hemoglobin complex (7.7%) blood microparticle (7.3%)" "oxygen binding (9.2%) heme binding (9.2%) metal ion binding (9.2%)" "IPR000971 (20.2%) IPR009050 (20.2%) IPR012292 (20.2%)" "Globin (20.2%) Globin-like superfamily (20.2%) Globin/Protoglobin (20.2%)" AGGIAAFIDAEHAFDRFYAAK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006281 (13.3%) GO:0006310 (13.3%) GO:0009432 (10%)" "GO:0005829 (13.3%) GO:0005737 (0.1%)" "GO:0003697 (13.3%) GO:0005524 (13.3%) GO:0140664 (13.3%)" "DNA repair (13.3%) DNA recombination (13.3%) SOS response (10%)" "cytosol (13.3%) cytoplasm (0.1%)" "single-stranded DNA binding (13.3%) ATP binding (13.3%) ATP-dependent DNA damage sensor activity (13.3%)" "IPR013765 (12%) IPR020588 (12%) IPR027417 (12%)" "DNA recombination and repair protein RecA (12%) DNA recombination and repair protein RecA-like, ATP-binding domain (12%) P-loop containing nucleoside triphosphate hydrolase (12%)" VFANRAEAEQTLAALTEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0005829 (100%) cytosol (100%) "IPR005272 (50%) IPR035571 (50%)" "Protein of unknown function DUF406 (50%) UPF0234-like, C-terminal (50%)" GLAHFLEHMAFDGSR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006508 (33.3%) "GO:0004222 (33.3%) GO:0046872 (33.3%)" proteolysis (33.3%) "metalloendopeptidase activity (33.3%) metal ion binding (33.3%)" "IPR001431 (20%) IPR007863 (20%) IPR011249 (20%)" "Peptidase M16, zinc-binding site (20%) Peptidase M16, C-terminal (20%) Metalloenzyme, LuxS/M16 peptidase-like (20%)" VQHGIYIGTQGPTFETPAEYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.4.2.1 (100%) purine-nucleoside phosphorylase (100%) GO:0009116 (33.3%) GO:0005737 (33.3%) GO:0004731 (33.3%) nucleoside metabolic process (33.3%) cytoplasm (33.3%) purine-nucleoside phosphorylase activity (33.3%) "IPR000845 (25%) IPR011268 (25%) IPR011270 (25%)" "Nucleoside phosphorylase domain (25%) Purine nucleoside phosphorylase (25%) Purine nucleoside phosphorylase I, inosine/guanosine-specific (25%)" ACEMECPK Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.3.5.1 (45.5%) 1.3.5.4 (27.3%) 1.3.99.1 (27.3%)" "succinate dehydrogenase (45.5%) Transferred entry: 1.3.5.1 (27.3%) Deleted entry (27.3%)" "GO:0009060 (24.1%) GO:0022904 (24.1%)" "GO:0009055 (24.1%) GO:0051537 (23.7%) GO:0016491 (1.8%)" "aerobic respiration (24.1%) respiratory electron transport chain (24.1%)" "electron transfer activity (24.1%) 2 iron, 2 sulfur cluster binding (23.7%) oxidoreductase activity (1.8%)" "IPR009051 (14.3%) IPR017896 (14.3%) IPR012675 (14.1%)" "Alpha-helical ferredoxin (14.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14.3%) Beta-grasp domain superfamily (14.1%)" VDEAAEALKQIAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25.1%) IPR005706 (25.1%) IPR023591 (25.1%)" "Small ribosomal subunit protein uS2 (25.1%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.1%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.1%)" LGLTQITYAEEILNVDKEAGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009055 (100%) electron transfer activity (100%) "IPR000049 (20%) IPR012255 (20%) IPR014729 (20%)" "Electron transfer flavoprotein, beta-subunit, conserved site (20%) Electron transfer flavoprotein, beta subunit (20%) Rossmann-like alpha/beta/alpha sandwich fold (20%)" VDQAYEYPSGMEVVANYTFADAAGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0046872 (100%) metal ion binding (100%) IPR049279 (100%) DUF3108-like (100%) ITAVFQPHLYTR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.2.8 (100%) UDP-N-acetylmuramate--L-alanine ligase (100%) "GO:0009252 (12.8%) GO:0008360 (12.5%) GO:0051301 (12.5%)" "GO:0005737 (12.5%) GO:0016020 (9.5%) GO:0005886 (0.3%)" "GO:0005524 (13.3%) GO:0008763 (12.8%) GO:0016881 (0.5%)" "peptidoglycan biosynthetic process (12.8%) regulation of cell shape (12.5%) cell division (12.5%)" "cytoplasm (12.5%) membrane (9.5%) plasma membrane (0.3%)" "ATP binding (13.3%) UDP-N-acetylmuramate-L-alanine ligase activity (12.8%) acid-amino acid ligase activity (0.5%)" "IPR004101 (14.4%) IPR036565 (14.4%) IPR036615 (14.4%)" "Mur ligase, C-terminal (14.4%) Mur-like, catalytic domain superfamily (14.4%) Mur ligase, C-terminal domain superfamily (14.4%)" QNISGERPEIKPILTKEEILDAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR011703 (25%) IPR027417 (25%) IPR041628 (25%)" "ATPase, AAA-3 (25%) P-loop containing nucleoside triphosphate hydrolase (25%) ChlI/MoxR, AAA lid domain (25%)" VILIGNVGKDPEVR Pseudomonadati Bacteria Pseudomonadati "GO:0006260 (29.7%) GO:0006281 (5.8%) GO:0006310 (5.8%)" GO:0009295 (29%) GO:0003697 (29.7%) "DNA replication (29.7%) DNA repair (5.8%) DNA recombination (5.8%)" nucleoid (29%) single-stranded DNA binding (29.7%) "IPR000424 (33.3%) IPR011344 (33.3%) IPR012340 (33.3%)" "Primosome PriB/single-strand DNA-binding (33.3%) Single-stranded DNA-binding protein (33.3%) Nucleic acid-binding, OB-fold (33.3%)" EAKDQENPAQFLADKEAEYTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.-.-.- (100%) Ligases (100%) GO:0015977 (20.9%) GO:0009317 (20.9%) "GO:0003989 (20.9%) GO:0004658 (20.9%) GO:0016740 (13.4%)" carbon fixation (20.9%) acetyl-CoA carboxylase complex (20.9%) "acetyl-CoA carboxylase activity (20.9%) propionyl-CoA carboxylase activity (20.9%) transferase activity (13.4%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" LELHCASQPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0051539 (100%) 4 iron, 4 sulfur cluster binding (100%) "IPR007160 (33.3%) IPR017896 (33.3%) IPR050157 (33.3%)" "Domain of unknown function DUF362 (33.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (33.3%) Photosystem I iron-sulfur center (33.3%)" ALVEAGVKPCGLGAR root 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (14.5%) GO:0032259 (11.7%) GO:0006546 (0.8%)" "GO:0005829 (15.4%) GO:0005960 (15.2%) GO:0005739 (0%)" "GO:0004047 (15.3%) GO:0008483 (15.3%) GO:0008168 (11.7%)" "glycine decarboxylation via glycine cleavage system (14.5%) methylation (11.7%) glycine catabolic process (0.8%)" "cytosol (15.4%) glycine cleavage complex (15.2%) mitochondrion (0%)" "aminomethyltransferase activity (15.3%) transaminase activity (15.3%) methyltransferase activity (11.7%)" "IPR006222 (14.5%) IPR027266 (14.5%) IPR028896 (14.5%)" "GCVT, N-terminal domain (14.5%) Aminomethyltransferase superfamily (14.5%) Aminomethyltransferase-like (14.5%)" MQEIQDIQER root GO:0050821 (25%) "GO:0005829 (25%) GO:0005737 (12.5%) GO:0005874 (12.5%)" GO:0051082 (25%) protein stabilization (25%) "cytosol (25%) cytoplasm (12.5%) microtubule (12.5%)" unfolded protein binding (25%) "IPR005632 (28.6%) IPR024930 (28.6%) IPR000938 (14.3%)" "Chaperone protein Skp (28.6%) Skp domain superfamily (28.6%) CAP Gly-rich domain (14.3%)" IISLADIAMYTNDSEVPLRDVLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR041218 (25%) IPR049280 (25%) IPR049281 (25%)" "Domain of unknown function DUF5606 (25%) Domain of unknown function DUF6852 (25%) BVU_3817-like, C-terminal domain superfamily (25%)" TFESLFAELSEK Actinomycetes Bacteria Bacillati Actinomycetota Actinomycetes 3.6.1.31 (100%) phosphoribosyl-ATP diphosphatase (100%) GO:0000105 (25%) GO:0005737 (25%) "GO:0004636 (25%) GO:0005524 (25%)" L-histidine biosynthetic process (25%) cytoplasm (25%) "phosphoribosyl-ATP diphosphatase activity (25%) ATP binding (25%)" "IPR008179 (50%) IPR021130 (50%)" "Phosphoribosyl-ATP pyrophosphohydrolase (50%) Phosphoribosyl-ATP pyrophosphohydrolase-like (50%)" DNTTIVNGAGAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.1%) GO:0005737 (16.1%) "GO:0005524 (17.1%) GO:0140662 (17.1%) GO:0016853 (16.5%)" protein refolding (17.1%) cytoplasm (16.1%) "ATP binding (17.1%) ATP-dependent protein folding chaperone (17.1%) isomerase activity (16.5%)" "IPR001844 (16.9%) IPR002423 (16.9%) IPR027409 (16.6%)" "Chaperonin Cpn60/GroEL (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%) GroEL-like apical domain superfamily (16.6%)" LGGAEAVGPILQGMAAPVNDLSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0016407 (54.2%) GO:0008959 (45.8%)" "acetyltransferase activity (54.2%) phosphate acetyltransferase activity (45.8%)" "IPR002505 (16.7%) IPR004614 (16.7%) IPR012147 (16.7%)" "Phosphate acetyl/butaryl transferase (16.7%) Phosphate acetyltransferase (16.7%) Phosphate acetyl/butyryltransferase (16.7%)" SVNVSDSKLEGVKVDSYELGWR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0044718 (24.5%) GO:0019271 (0.4%)" GO:0009279 (25.6%) "GO:0015344 (24.9%) GO:0038023 (24.5%) GO:0047091 (0.2%)" "siderophore transmembrane transport (24.5%) aerobactin transport (0.4%)" cell outer membrane (25.6%) "siderophore uptake transmembrane transporter activity (24.9%) signaling receptor activity (24.5%) L-lysine 6-monooxygenase (NADPH) activity (0.2%)" "IPR000531 (14.2%) IPR036942 (14.2%) IPR039426 (13.8%)" "TonB-dependent receptor-like, beta-barrel (14.2%) TonB-dependent receptor-like, beta-barrel domain superfamily (14.2%) TonB-dependent receptor-like (13.8%)" NAGFAATNAAEWAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (16.7%) IPR006099 (16.7%) IPR006158 (16.7%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-binding domain (16.7%)" LVDIVEPTEKTVDALMR root "GO:0006412 (19.9%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0005840 (20.1%) GO:1990904 (19.8%) GO:0015935 (0.1%)" "GO:0003735 (19.9%) GO:0000049 (19.8%) GO:0003723 (0.1%)" "translation (19.9%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (20.1%) ribonucleoprotein complex (19.8%) small ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) tRNA binding (19.8%) RNA binding (0.1%)" "IPR027486 (25%) IPR001848 (25%) IPR036838 (25%)" "Small ribosomal subunit protein uS10 domain (25%) Small ribosomal subunit protein uS10 (25%) Small ribosomal subunit protein uS10 domain superfamily (25%)" QAITAAGSGCK root "1.8.1.9 (99.6%) 4.3.1.9 (0.4%)" "thioredoxin-disulfide reductase (NADPH) (99.6%) glucosaminate ammonia-lyase (0.4%)" "GO:0019430 (32.8%) GO:0045454 (0.3%) GO:0097237 (0.2%)" GO:0005737 (32.8%) "GO:0004791 (33%) GO:0016491 (0.5%) GO:0016829 (0.2%)" "removal of superoxide radicals (32.8%) cell redox homeostasis (0.3%) cellular response to toxic substance (0.2%)" cytoplasm (32.8%) "thioredoxin-disulfide reductase (NADPH) activity (33%) oxidoreductase activity (0.5%) lyase activity (0.2%)" "IPR023753 (20.1%) IPR036188 (20.1%) IPR050097 (20.1%)" "FAD/NAD(P)-binding domain (20.1%) FAD/NAD(P)-binding domain superfamily (20.1%) Ferredoxin--NADP reductase type 2 (20.1%)" IFTPGDKADVLVAMNPAALK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.-.- (33.3%) 1.2.7.11 (33.3%) 1.2.7.3 (33.3%)" "Acting on the aldehyde or oxo group of donors (33.3%) 2-oxoacid oxidoreductase (ferredoxin) (33.3%) 2-oxoglutarate synthase (33.3%)" GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.6%) IPR002880 (12.6%) IPR009014 (12.6%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.6%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.6%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.6%)" NLPCTVIEVGPCVVTQIK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" IVNEPTAASLAYGLDK root 1.3.1.74 (100%) 2-alkenal reductase [NAD(P)(+)] (100%) GO:0016226 (0.5%) "GO:0005737 (9.3%) GO:0070013 (0.9%) GO:0009507 (0.5%)" "GO:0005524 (29.8%) GO:0140662 (29.8%) GO:0051082 (28.2%)" iron-sulfur cluster assembly (0.5%) "cytoplasm (9.3%) intracellular organelle lumen (0.9%) chloroplast (0.5%)" "ATP binding (29.8%) ATP-dependent protein folding chaperone (29.8%) unfolded protein binding (28.2%)" "IPR013126 (17%) IPR018181 (17%) IPR043129 (17%)" "Heat shock protein 70 family (17%) Heat shock protein 70, conserved site (17%) ATPase, nucleotide binding domain (17%)" VLEHLENSDTEDFNLAGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (50%) GO:0004356 (50%) glutamine biosynthetic process (50%) glutamine synthetase activity (50%) "IPR008146 (14.4%) IPR008147 (14.4%) IPR022147 (14.4%)" "Glutamine synthetase, catalytic domain (14.4%) Glutamine synthetase, N-terminal domain (14.4%) Glutamine synthetase type III N-terminal (14.4%)" KGEGIHHIAFAVPDVQAALNEAEEKGVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (42.9%) "GO:0004493 (42.9%) GO:0016829 (7.1%) GO:0051213 (7.1%)" L-methylmalonyl-CoA metabolic process (42.9%) "methylmalonyl-CoA epimerase activity (42.9%) lyase activity (7.1%) dioxygenase activity (7.1%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" KSTAESIVYSALETLAQR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0015935 (19.5%) GO:0005840 (0.7%) GO:1990904 (0.2%)" "GO:0003735 (19.8%) GO:0019843 (19.6%) GO:0000049 (19.5%)" "translation (19.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "small ribosomal subunit (19.5%) ribosome (0.7%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (19.8%) rRNA binding (19.6%) tRNA binding (19.5%)" "IPR023798 (20.1%) IPR036823 (20.1%) IPR000235 (20%)" "Small ribosomal subunit protein uS7 domain (20.1%) Small ribosomal subunit protein uS7 domain superfamily (20.1%) Small ribosomal subunit protein uS7 (20%)" HENKPDMLTCAQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.4.13.- (75%) 3.5.1.- (25%)" "Dipeptidases (75%) In linear amides (25%)" "GO:0046872 (50%) GO:0016787 (35%) GO:0016805 (15%)" "metal ion binding (50%) hydrolase activity (35%) dipeptidase activity (15%)" "IPR002933 (33.3%) IPR011650 (33.3%) IPR051458 (33.3%)" "Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%) Cytosolic and Metallo Dipeptidase (33.3%)" SFTPANQEMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.2.14 (100%) amidophosphoribosyltransferase (100%) "GO:0009113 (20.2%) GO:0006189 (16.7%) GO:0006164 (3.6%)" "GO:0004044 (20.2%) GO:0046872 (19.6%) GO:0051536 (19.6%)" "purine nucleobase biosynthetic process (20.2%) 'de novo' IMP biosynthetic process (16.7%) purine nucleotide biosynthetic process (3.6%)" "amidophosphoribosyltransferase activity (20.2%) metal ion binding (19.6%) iron-sulfur cluster binding (19.6%)" "IPR000836 (20%) IPR005854 (20%) IPR017932 (20%)" "Phosphoribosyltransferase domain (20%) Amidophosphoribosyltransferase (20%) Glutamine amidotransferase type 2 domain (20%)" AEQAIVEACEEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004829 (16.7%) GO:0005524 (16.7%)" threonyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) threonine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" LFSEFAPVSTEEWMAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" FYQPDIDVEKMEHTSGDVFSNASDLSTTLR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.3.1.1 (100%) dihydrouracil dehydrogenase (NAD(+)) (100%) "GO:0006210 (13.9%) GO:0006212 (13.9%) GO:0044205 (11.9%)" GO:0005737 (13.9%) "GO:0002058 (13.9%) GO:0050661 (13.9%) GO:0004152 (12.9%)" "thymine catabolic process (13.9%) uracil catabolic process (13.9%) 'de novo' UMP biosynthetic process (11.9%)" cytoplasm (13.9%) "uracil binding (13.9%) NADP binding (13.9%) dihydroorotate dehydrogenase activity (12.9%)" "IPR005720 (33.3%) IPR012135 (33.3%) IPR013785 (33.3%)" "Dihydroorotate dehydrogenase, catalytic (33.3%) Dihydroorotate dehydrogenase, class 1/ 2 (33.3%) Aldolase-type TIM barrel (33.3%)" TWVEDFVDEDTGEVVSIER Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.5%) GO:0006508 (1.4%)" GO:0000428 (19.5%) "GO:0003677 (19.5%) GO:0003899 (19.5%) GO:0032549 (19.3%)" "DNA-templated transcription (19.5%) proteolysis (1.4%)" DNA-directed RNA polymerase complex (19.5%) "DNA binding (19.5%) DNA-directed RNA polymerase activity (19.5%) ribonucleoside binding (19.3%)" "IPR007120 (7.7%) IPR007121 (7.7%) IPR007641 (7.7%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.7%) RNA polymerase, beta subunit, conserved site (7.7%) RNA polymerase Rpb2, domain 7 (7.7%)" LDEKIVDDVLDQHRER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.4%) GO:0006402 (14.4%)" GO:0005829 (14.4%) "GO:0000175 (14.4%) GO:0003723 (14.4%) GO:0004654 (14.4%)" "RNA processing (14.4%) mRNA catabolic process (14.4%)" cytosol (14.4%) "3'-5'-RNA exonuclease activity (14.4%) RNA binding (14.4%) polyribonucleotide nucleotidyltransferase activity (14.4%)" "IPR001247 (7.8%) IPR012162 (7.8%) IPR015847 (7.8%)" "Exoribonuclease, phosphorolytic domain 1 (7.8%) Polyribonucleotide nucleotidyltransferase (7.8%) Exoribonuclease, phosphorolytic domain 2 (7.8%)" IGDLLAQLEGTCLVTR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.7.1 (33.3%) 1.2.7.11 (33.3%) 1.2.7.3 (33.3%)" "pyruvate synthase (33.3%) 2-oxoacid oxidoreductase (ferredoxin) (33.3%) 2-oxoglutarate synthase (33.3%)" GO:0044281 (32.1%) "GO:0030976 (34%) GO:0016625 (32.1%) GO:0019164 (1.9%)" small molecule metabolic process (32.1%) "thiamine pyrophosphate binding (34%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (32.1%) pyruvate synthase activity (1.9%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" ECMENGHNYFSVASGGGTGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR025964 (100%) GGGtGRT protein (100%) NDEKDLTPEQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006355 (33.3%) GO:0005829 (33.3%) GO:0003677 (33.3%) regulation of DNA-templated transcription (33.3%) cytosol (33.3%) DNA binding (33.3%) "IPR002876 (16.7%) IPR017856 (16.7%) IPR026564 (16.7%)" "Transcriptional regulator TACO1-like (16.7%) Integrase-like, N-terminal (16.7%) Transcriptional regulator TACO1-like, domain 3 (16.7%)" FFPGYVLVQMVMNDASWHLVR root "GO:0031564 (20.1%) GO:0006354 (19.9%) GO:0006353 (19.7%)" "GO:0005829 (20.1%) GO:0005840 (0%) GO:0005886 (0%)" "GO:0003735 (0%) GO:0008320 (0%) GO:0016491 (0%)" "transcription antitermination (20.1%) DNA-templated transcription elongation (19.9%) DNA-templated transcription termination (19.7%)" "cytosol (20.1%) ribosome (0%) plasma membrane (0%)" "structural constituent of ribosome (0%) protein transmembrane transporter activity (0%) oxidoreductase activity (0%)" "IPR006645 (11.2%) IPR036735 (11.2%) IPR043425 (11.2%)" "NusG-like, N-terminal (11.2%) NusG, N-terminal domain superfamily (11.2%) NusG-like (11.2%)" ATEKADMLYAEIDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.8%) GO:0008615 (19.8%)" GO:0005737 (19.8%) "GO:0004648 (19.8%) GO:0030170 (19.8%) GO:0008483 (0.9%)" "L-serine biosynthetic process (19.8%) pyridoxine biosynthetic process (19.8%)" cytoplasm (19.8%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.8%) pyridoxal phosphate binding (19.8%) transaminase activity (0.9%)" "IPR000192 (20%) IPR015421 (20%) IPR015422 (20%)" "Aminotransferase class V domain (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" GNEAIAHAAIR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "1.2.7.7 (54.3%) 1.2.7.1 (18.1%) 1.2.7.3 (17%)" "3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) (54.3%) pyruvate synthase (18.1%) 2-oxoglutarate synthase (17%)" "GO:0016491 (73.5%) GO:0043807 (16.6%) GO:0019164 (6%)" "oxidoreductase activity (73.5%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity (16.6%) pyruvate synthase activity (6%)" "IPR002880 (20.1%) IPR052368 (20.1%) IPR029061 (20.1%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20.1%) 2-oxoacid oxidoreductase subunit (20.1%) Thiamin diphosphate-binding fold (20.1%)" SMEVIADALSGFNHSKYPWIEWDQSSMSGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" WIVQAGYPSKDIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR006311 (20%) IPR013022 (20%) IPR019546 (20%)" "Twin-arginine translocation pathway, signal sequence (20%) Xylose isomerase-like, TIM barrel domain (20%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (20%)" ITGVIPVDLAVEQMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (72.2%) 1.2.7.- (16.7%) 1.2.1.51 (11.1%)" "pyruvate synthase (72.2%) With an iron-sulfur protein as acceptor (16.7%) pyruvate dehydrogenase (NADP(+)) (11.1%)" "GO:0006979 (14.7%) GO:0022900 (14.5%) GO:0044281 (11.8%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.7%) electron transport chain (14.5%) small molecule metabolic process (11.8%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.8%) IPR050722 (7.8%) IPR011766 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%) Thiamine pyrophosphate enzyme, TPP-binding (7.7%)" FGANAILAVSLANAK root "4.2.1.11 (99.9%) 6.3.4.2 (0.1%)" "phosphopyruvate hydratase (99.9%) CTP synthase (glutamine hydrolyzing) (0.1%)" "GO:0006096 (16.7%) GO:0006396 (0%) GO:0006401 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (15.9%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" "glycolytic process (16.7%) RNA processing (0%) RNA catabolic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (15.9%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020811 (16.8%) IPR029017 (16.8%)" "Enolase (16.8%) Enolase, N-terminal (16.8%) Enolase-like, N-terminal (16.8%)" AHLPEGVYAGGLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR011542 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufD (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" ASDTFGWNLDLASIAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" YGENEDVTGAVAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (25%) IPR018211 (25%) IPR044731 (25%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (25%) Alcohol dehydrogenase, iron-type, conserved site (25%) Butanol dehydrogenase-like (25%)" DLNNCWAVVAEGIQTVLRR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (20.7%) GO:0044208 (20.7%) GO:0006188 (13.8%)" "GO:0004018 (34.5%) GO:0070626 (10.3%)" "'de novo' IMP biosynthetic process (20.7%) 'de novo' AMP biosynthetic process (20.7%) IMP biosynthetic process (13.8%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (34.5%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (10.3%)" "IPR000362 (12.5%) IPR004769 (12.5%) IPR008948 (12.5%)" "Fumarate lyase family (12.5%) Adenylosuccinate lyase (12.5%) L-Aspartase-like (12.5%)" RGEPAIFGVNQVIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" TEHMFFEADKIK Bacteria Bacteria 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" KLQLVGVGYR root "2.3.2.27 (50%) 3.1.1.- (50%)" "RING-type E3 ubiquitin transferase (50%) Carboxylic ester hydrolases (50%)" "GO:0002181 (21.3%) GO:0006412 (2.7%) GO:0009793 (0.2%)" "GO:0022625 (21.4%) GO:0005840 (3%) GO:1990904 (2.7%)" "GO:0003735 (24%) GO:0019843 (24%) GO:0003729 (0.2%)" "cytoplasmic translation (21.3%) translation (2.7%) embryo development ending in seed dormancy (0.2%)" "cytosolic large ribosomal subunit (21.4%) ribosome (3%) ribonucleoprotein complex (2.7%)" "structural constituent of ribosome (24%) rRNA binding (24%) mRNA binding (0.2%)" "IPR020040 (19.9%) IPR019906 (19.9%) IPR036789 (19.9%)" "Large ribosomal subunit protein uL6, alpha-beta domain (19.9%) Large ribosomal subunit protein uL6, bacteria (19.9%) Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily (19.9%)" GSLPIALDEVITDGHKR root "1.1.1.1 (53.9%) 1.2.1.10 (45.9%) 1.-.-.- (0.2%)" "alcohol dehydrogenase (53.9%) acetaldehyde dehydrogenase (acetylating) (45.9%) Oxidoreductases (0.2%)" "GO:0015976 (15.3%) GO:0006066 (15.2%) GO:0006115 (0%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0046872 (23%) GO:0004022 (20.8%) GO:0008774 (18.8%)" "carbon utilization (15.3%) alcohol metabolic process (15.2%) ethanol biosynthetic process (0%)" "cytosol (0%) membrane (0%)" "metal ion binding (23%) alcohol dehydrogenase (NAD+) activity (20.8%) acetaldehyde dehydrogenase (acetylating) activity (18.8%)" "IPR001670 (11.1%) IPR016162 (11.1%) IPR016163 (10.8%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (11.1%) Aldehyde dehydrogenase, N-terminal (11.1%) Aldehyde dehydrogenase, C-terminal (10.8%)" TKHNVIDIMEEQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.6%) GO:0044210 (11.6%)" "GO:0005829 (11.6%) GO:0097268 (10.6%)" "GO:0003883 (11.6%) GO:0005524 (11.6%) GO:0042802 (11.6%)" "pyrimidine nucleobase biosynthetic process (11.6%) 'de novo' CTP biosynthetic process (11.6%)" "cytosol (11.6%) cytoophidium (10.6%)" "CTP synthase activity (11.6%) ATP binding (11.6%) identical protein binding (11.6%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" KANVIAGEAGGITQHIGAYHVTLEDGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (9.1%) IPR000795 (9.1%) IPR005225 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translational (tr)-type GTP-binding domain (9.1%) Small GTP-binding domain (9.1%)" DFGLGDSVEYLPELQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR024492 (100%) CT_309/TC_0583-like (100%) AMEHSQPPIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002319 (14.3%) IPR004188 (14.3%) IPR004529 (14.3%)" "Phenylalanyl-tRNA synthetase (14.3%) Phenylalanine-tRNA ligase, class II, N-terminal (14.3%) Phenylalanyl-tRNA synthetase, class IIc, alpha subunit (14.3%)" KNGSFLLNTIWEGEELAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (73.5%) 1.2.7.- (23.5%) 1.2.1.51 (2.9%)" "pyruvate synthase (73.5%) With an iron-sulfur protein as acceptor (23.5%) pyruvate dehydrogenase (NADP(+)) (2.9%)" "GO:0006979 (14.8%) GO:0022900 (14.7%) GO:0044281 (11.3%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.4%)" "response to oxidative stress (14.8%) electron transport chain (14.7%) small molecule metabolic process (11.3%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.4%)" "IPR002869 (7.8%) IPR019752 (7.8%) IPR050722 (7.8%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%)" AADVETLGDLVQFNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) "GO:0000428 (16.9%) GO:0005737 (16%)" "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0046983 (16.4%)" DNA-templated transcription (16.8%) "DNA-directed RNA polymerase complex (16.9%) cytoplasm (16%)" "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) protein dimerization activity (16.4%)" "IPR011260 (17.2%) IPR011263 (16.8%) IPR036603 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (17.2%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) RNA polymerase, RBP11-like subunit (16.7%)" TNFDLSQHEK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.6%) GO:0015966 (12.3%) GO:0044281 (0.3%)" "GO:0005737 (12.6%) GO:0070062 (12.3%) GO:1990742 (12.3%)" "GO:0004820 (12.6%) GO:0005524 (12.6%) GO:0004081 (12.3%)" "glycyl-tRNA aminoacylation (12.6%) diadenosine tetraphosphate biosynthetic process (12.3%) small molecule metabolic process (0.3%)" "cytoplasm (12.6%) extracellular exosome (12.3%) microvesicle (12.3%)" "glycine-tRNA ligase activity (12.6%) ATP binding (12.6%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.3%)" "IPR004154 (11.2%) IPR027031 (11.2%) IPR006195 (11.2%)" "Anticodon-binding (11.2%) Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 (11.2%) Aminoacyl-tRNA synthetase, class II (11.2%)" GLAIDTALPSGEEFPR root "GO:0051274 (25.1%) GO:0007155 (0%) GO:0032049 (0%)" "GO:0030288 (25%) GO:0005886 (0.1%) GO:0016020 (0.1%)" "GO:0030246 (24.9%) GO:0003824 (24.8%) GO:0016758 (0.1%)" "beta-glucan biosynthetic process (25.1%) cell adhesion (0%) cardiolipin biosynthetic process (0%)" "outer membrane-bounded periplasmic space (25%) plasma membrane (0.1%) membrane (0.1%)" "carbohydrate binding (24.9%) catalytic activity (24.8%) hexosyltransferase activity (0.1%)" "IPR007444 (14.5%) IPR014438 (14.5%) IPR011013 (14.4%)" "Glucan biosynthesis, periplasmic, MdoG C-terminal (14.5%) Glucan biosynthesis protein MdoG/MdoD (14.5%) Galactose mutarotase-like domain superfamily (14.4%)" VGDTVEVYIENQEDKKGQLVLSHR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.6%) "GO:0022627 (23.5%) GO:0005840 (1.8%) GO:1990904 (1.1%)" "GO:0003729 (24.6%) GO:0003735 (24.6%)" translation (24.6%) "cytosolic small ribosomal subunit (23.5%) ribosome (1.8%) ribonucleoprotein complex (1.1%)" "mRNA binding (24.6%) structural constituent of ribosome (24.6%)" "IPR003029 (24.8%) IPR012340 (24.8%) IPR035104 (24.8%)" "S1 domain (24.8%) Nucleic acid-binding, OB-fold (24.8%) Ribosomal protein S1-like (24.8%)" YSVSDMINR root 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (8.5%) GO:0030388 (8.5%) GO:0061621 (8.5%)" "GO:0005945 (8.5%) GO:0005737 (0%) GO:0005829 (0%)" "GO:0003872 (8.6%) GO:0005524 (8.5%) GO:0046872 (8.5%)" "fructose 6-phosphate metabolic process (8.5%) fructose 1,6-bisphosphate metabolic process (8.5%) canonical glycolysis (8.5%)" "6-phosphofructokinase complex (8.5%) cytoplasm (0%) cytosol (0%)" "6-phosphofructokinase activity (8.6%) ATP binding (8.5%) metal ion binding (8.5%)" "IPR035966 (17%) IPR000023 (17%) IPR022953 (16.9%)" "Phosphofructokinase superfamily (17%) Phosphofructokinase domain (17%) ATP-dependent 6-phosphofructokinase (16.9%)" MTHDNKLQVEAIKR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006207 (21.1%) GO:0006221 (20.7%)" "GO:0009347 (21.1%) GO:0005737 (0.1%)" "GO:0046872 (19.8%) GO:0016740 (16.4%) GO:0008270 (0.6%)" "'de novo' pyrimidine nucleobase biosynthetic process (21.1%) pyrimidine nucleotide biosynthetic process (20.7%)" "aspartate carbamoyltransferase complex (21.1%) cytoplasm (0.1%)" "metal ion binding (19.8%) transferase activity (16.4%) zinc ion binding (0.6%)" "IPR020545 (20.3%) IPR036793 (20.3%) IPR002801 (20%)" "Aspartate carbamoyltransferase regulatory subunit, N-terminal (20.3%) Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily (20.3%) Aspartate transcarbamylase regulatory subunit (20%)" QSLANVEALLTAAGATFADVVK Collinsella aerofaciens Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella aerofaciens "3.5.99.10 (75%) 3.5.4.- (25%)" "2-iminobutanoate/2-iminopropanoate deaminase (75%) In cyclic amidines (25%)" GO:0005829 (50%) "GO:0120241 (30%) GO:0019239 (20%)" cytosol (50%) "2-iminobutanoate/2-iminopropanoate deaminase (30%) deaminase activity (20%)" "IPR006056 (25%) IPR006175 (25%) IPR019897 (25%)" "RidA family (25%) YjgF/YER057c/UK114 family (25%) RidA, conserved site (25%)" GEREPVTEAER root "GO:0007059 (25%) GO:0044010 (25%) GO:0051276 (25%)" GO:0005829 (25%) "chromosome segregation (25%) single-species biofilm formation (25%) chromosome organization (25%)" cytosol (25%) IPR007335 (100%) Protein of unknown function DUF413 (100%) KTTEIRPIWIETDCLPGPHGSAIFTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8.3%) IPR003029 (8.3%) IPR004087 (8.3%)" "Exoribonuclease, phosphorolytic domain 1 (8.3%) S1 domain (8.3%) K Homology domain (8.3%)" AGLKPLLGFDVWEHAYYLDYQNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.15.1.1 (100%) superoxide dismutase (100%) GO:0005737 (33.3%) "GO:0004784 (33.3%) GO:0046872 (33.3%)" cytoplasm (33.3%) "superoxide dismutase activity (33.3%) metal ion binding (33.3%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" TLAMDDGVNYTAGLPIVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.262 (100%) 4-hydroxythreonine-4-phosphate dehydrogenase (100%) "GO:0046872 (33.3%) GO:0051287 (33.3%) GO:0016491 (17.9%)" "metal ion binding (33.3%) NAD binding (33.3%) oxidoreductase activity (17.9%)" IPR005255 (100%) PdxA family (100%) KVGMTRIFTEDGVSIPVTVIEVEANR root "GO:0006412 (24.8%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (24.8%) GO:0005840 (0.6%) GO:0005737 (0%)" "GO:0003735 (24.8%) GO:0019843 (24.8%)" "translation (24.8%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.8%) ribosome (0.6%) cytoplasm (0%)" "structural constituent of ribosome (24.8%) rRNA binding (24.8%)" "IPR009000 (25.1%) IPR019927 (25.1%) IPR000597 (24.7%)" "Translation protein, beta-barrel domain superfamily (25.1%) Large ribosomal subunit protein uL3, bacteria/organella (25.1%) Large ribosomal subunit protein uL3 (24.7%)" ALFGETISNPSLEVLDIEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.5.1.49 (42.9%) 4.4.1.11 (42.9%) 2.5.1.48 (14.3%)" "O-acetylhomoserine aminocarboxypropyltransferase (42.9%) methionine gamma-lyase (42.9%) cystathionine gamma-synthase (14.3%)" "GO:0019346 (13.9%) GO:0071269 (13.9%) GO:0006535 (13.7%)" GO:0005737 (13.7%) "GO:0004124 (13.9%) GO:0030170 (13.9%) GO:0003961 (13.7%)" "transsulfuration (13.9%) L-homocysteine biosynthetic process (13.9%) cysteine biosynthetic process from serine (13.7%)" cytoplasm (13.7%) "cysteine synthase activity (13.9%) pyridoxal phosphate binding (13.9%) O-acetylhomoserine aminocarboxypropyltransferase activity (13.7%)" "IPR000277 (20%) IPR006235 (20%) IPR015421 (20%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (20%) O-acetylhomoserine/O-acetylserine sulfhydrylase (20%) Pyridoxal phosphate-dependent transferase, major domain (20%)" AETAEKYGDEQVKQWR root "5.4.2.11 (99.5%) 5.4.2.- (0.3%) 5.4.2.1 (0.1%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (99.5%) Phosphotransferases (phosphomutases) (0.3%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.1%)" "GO:0006096 (33.1%) GO:0006094 (33%) GO:0061621 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004619 (32.8%) GO:0016868 (0.4%) GO:0016853 (0.3%)" "glycolytic process (33.1%) gluconeogenesis (33%) canonical glycolysis (0%)" "cytoplasm (0%) cytosol (0%)" "phosphoglycerate mutase activity (32.8%) intramolecular phosphotransferase activity (0.4%) isomerase activity (0.3%)" "IPR005952 (25.2%) IPR013078 (25.1%) IPR029033 (25.1%)" "Phosphoglycerate mutase 1 (25.2%) Histidine phosphatase superfamily, clade-1 (25.1%) Histidine phosphatase superfamily (25.1%)" NIDINMILLNNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.3 (72.7%) 1.2.-.- (18.2%) 1.2.7.11 (9.1%)" "2-oxoglutarate synthase (72.7%) Acting on the aldehyde or oxo group of donors (18.2%) 2-oxoacid oxidoreductase (ferredoxin) (9.1%)" GO:0044281 (32.9%) "GO:0030976 (33.4%) GO:0016625 (31.7%) GO:0047553 (1.7%)" small molecule metabolic process (32.9%) "thiamine pyrophosphate binding (33.4%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (31.7%) 2-oxoglutarate synthase activity (1.7%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" TMEAENMHYPLHLGVTEAGDGEDGRIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.17.7.3 (100%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (100%) "GO:0016114 (17.1%) GO:0019288 (17.1%)" "GO:0005506 (17.1%) GO:0046429 (17.1%) GO:0051539 (17.1%)" "terpenoid biosynthetic process (17.1%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.1%)" "iron ion binding (17.1%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.1%) 4 iron, 4 sulfur cluster binding (17.1%)" "IPR004588 (25%) IPR011005 (25%) IPR017178 (25%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25%) Dihydropteroate synthase-like superfamily (25%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (25%)" MAEEHDADLVEISPNAVPPVCR Phocaeicola salanitronis DSM 18170 Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola salanitronis Phocaeicola salanitronis DSM 18170 GO:0032790 (20%) "GO:0005829 (20%) GO:0016020 (20%)" "GO:0003743 (20%) GO:0043022 (20%)" ribosome disassembly (20%) "cytosol (20%) membrane (20%)" "translation initiation factor activity (20%) ribosome binding (20%)" "IPR001288 (16.7%) IPR019813 (16.7%) IPR019814 (16.7%)" "Translation initiation factor 3 (16.7%) Translation initiation factor 3, conserved site (16.7%) Translation initiation factor 3, N-terminal (16.7%)" VHVATYQAASGAGAAAMDELYEQYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000319 (16.7%) IPR000534 (16.7%) IPR005986 (16.7%)" "Aspartate-semialdehyde dehydrogenase, conserved site (16.7%) Semialdehyde dehydrogenase, NAD-binding (16.7%) Aspartate-semialdehyde dehydrogenase, beta-type (16.7%)" QNDAYAIANLAGNFGWAAQAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) ALILCSPSNPTGSVYTKEELAGLAAVLAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" ISSLIVSNVIKDAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.7.2.4 (55.6%) 1.1.1.3 (44.4%)" "aspartate kinase (55.6%) homoserine dehydrogenase (44.4%)" "GO:0009086 (11.1%) GO:0009088 (11.1%) GO:0009089 (11.1%)" "GO:0004072 (11.1%) GO:0004412 (11.1%) GO:0005524 (11.1%)" "methionine biosynthetic process (11.1%) threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%)" "aspartate kinase activity (11.1%) homoserine dehydrogenase activity (11.1%) ATP binding (11.1%)" "IPR001048 (7.1%) IPR001341 (7.1%) IPR001342 (7.1%)" "Aspartate/glutamate/uridylate kinase (7.1%) Aspartate kinase (7.1%) Homoserine dehydrogenase, catalytic (7.1%)" HKANLTAQINK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0005829 (19.7%) GO:0015935 (19.7%) GO:0005840 (0.6%)" "GO:0003735 (19.9%) GO:0070181 (19.8%) GO:0003723 (0%)" "translation (19.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosol (19.7%) small ribosomal subunit (19.7%) ribosome (0.6%)" "structural constituent of ribosome (19.9%) small ribosomal subunit rRNA binding (19.8%) RNA binding (0%)" "IPR036510 (50.1%) IPR002583 (49.9%)" "Small ribosomal subunit protein bS20 superfamily (50.1%) Small ribosomal subunit protein bS20 (49.9%)" MYAGFATAEESNKR Bacillota Bacteria Bacillati Bacillota "5.4.99.2 (77.8%) 5.4.99.- (22.2%)" "methylmalonyl-CoA mutase (77.8%) Transferring other groups (22.2%)" "GO:0004494 (50%) GO:0031419 (50%)" "methylmalonyl-CoA mutase activity (50%) cobalamin binding (50%)" "IPR006098 (33.3%) IPR006099 (33.3%) IPR016176 (33.3%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (33.3%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (33.3%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (33.3%)" LISGVDVWLNTPTRPLEASGTSGEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" RTGCQEIEAYFLASDYAYRQEPSAEAAVGLGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (43.5%) IPR019734 (43.5%) IPR013105 (13%)" "Tetratricopeptide-like helical domain superfamily (43.5%) Tetratricopeptide repeat (43.5%) Tetratricopeptide repeat 2 (13%)" VVDAGNDNVMITER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.5.1.55 (100%) 3-deoxy-8-phosphooctulonate synthase (100%) GO:0009103 (25%) GO:0005737 (37.5%) GO:0008676 (37.5%) lipopolysaccharide biosynthetic process (25%) cytoplasm (37.5%) 3-deoxy-8-phosphooctulonate synthase activity (37.5%) "IPR006218 (33.3%) IPR006269 (33.3%) IPR013785 (33.3%)" "DAHP synthetase I/KDSA (33.3%) 3-deoxy-8-phosphooctulonate synthase (33.3%) Aldolase-type TIM barrel (33.3%)" VDKATAGTEVYVAGVRPSVSDTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) LFDMDSKEVIAQGGIEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" HQQHFEALKETEQHNLDQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR007139 (100%) Protein of unknown function DUF349 (100%) RGQTAFVSSNTNFVMLNGQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR025347 (100%) Protein of unknown function DUF4251 (100%) GALSAVVADSR root "GO:0006412 (24.9%) GO:0006417 (0.1%) GO:0002181 (0%)" "GO:0015934 (22.2%) GO:0005840 (3%) GO:1990904 (2.6%)" "GO:0070180 (24.7%) GO:0003735 (22.3%) GO:0019843 (0.2%)" "translation (24.9%) regulation of translation (0.1%) cytoplasmic translation (0%)" "large ribosomal subunit (22.2%) ribosome (3%) ribonucleoprotein complex (2.6%)" "large ribosomal subunit rRNA binding (24.7%) structural constituent of ribosome (22.3%) rRNA binding (0.2%)" "IPR001790 (20.5%) IPR043141 (20.5%) IPR047865 (20.4%)" "Large ribosomal subunit protein uL10 (20.5%) Large ribosomal subunit protein uL10-like domain superfamily (20.5%) Large ribosomal subunit protein uL10, bacteria/organella (20.4%)" LYPFTFKPILK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (32.4%) "GO:0004476 (32.4%) GO:0008270 (32.4%) GO:0016853 (2.7%)" carbohydrate metabolic process (32.4%) "mannose-6-phosphate isomerase activity (32.4%) zinc ion binding (32.4%) isomerase activity (2.7%)" "IPR011051 (18.3%) IPR014710 (18.3%) IPR014628 (16.9%)" "RmlC-like cupin domain superfamily (18.3%) RmlC-like jelly roll fold (18.3%) Mannose-6-phosphate isomerase, Firmicutes type, short form (16.9%)" LAEEDPTFR root 5.6.2.4 (100%) DNA 3'-5' helicase (100%) "GO:0032790 (20.1%) GO:0006412 (0.1%) GO:0070125 (0%)" "GO:0005737 (19.6%) GO:0005739 (0%) GO:0005829 (0%)" "GO:0005525 (20.1%) GO:0003746 (20.1%) GO:0003924 (19.7%)" "ribosome disassembly (20.1%) translation (0.1%) mitochondrial translational elongation (0%)" "cytoplasm (19.6%) mitochondrion (0%) cytosol (0%)" "GTP binding (20.1%) translation elongation factor activity (20.1%) GTPase activity (19.7%)" "IPR041095 (6.3%) IPR035647 (6.3%) IPR009022 (6.3%)" "Elongation Factor G, domain II (6.3%) EF-G domain III/V-like (6.3%) Elongation factor G, domain III (6.3%)" IISNNGDLVAEAYSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) FNEFRTECMHCIAQAGGQIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" GMSKEEAEAASPLMNEAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.19 (100%) arginine--tRNA ligase (100%) GO:0006420 (25%) GO:0005737 (25%) "GO:0004814 (25%) GO:0005524 (25%)" arginyl-tRNA aminoacylation (25%) cytoplasm (25%) "arginine-tRNA ligase activity (25%) ATP binding (25%)" "IPR001278 (12.5%) IPR001412 (12.5%) IPR005148 (12.5%)" "Arginine-tRNA ligase (12.5%) Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Arginyl tRNA synthetase N-terminal domain (12.5%)" KIGMTSVFSAEGK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.5%)" "GO:0003735 (24.9%) GO:0019843 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.5%)" "structural constituent of ribosome (24.9%) rRNA binding (24.9%)" "IPR009000 (25.8%) IPR000597 (25.5%) IPR019927 (25.5%)" "Translation protein, beta-barrel domain superfamily (25.8%) Large ribosomal subunit protein uL3 (25.5%) Large ribosomal subunit protein uL3, bacteria/organella (25.5%)" MQMAQDVSSMVLALRR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.5%) GO:0005737 (13.9%) "GO:0000049 (14.5%) GO:0004822 (14.5%) GO:0005524 (14.5%)" isoleucyl-tRNA aminoacylation (14.5%) cytoplasm (13.9%) "tRNA binding (14.5%) isoleucine-tRNA ligase activity (14.5%) ATP binding (14.5%)" "IPR002300 (12.6%) IPR009080 (12.6%) IPR013155 (12.6%)" "Aminoacyl-tRNA synthetase, class Ia (12.6%) Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (12.6%) Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding (12.6%)" HTTTVVYNYGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GAALNAVQIAEYLIK Bacteria Bacteria 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0019877 (11.1%) GO:0009088 (11%) GO:0009089 (11%)" "GO:0046983 (11.2%) GO:0004073 (11.1%) GO:0050661 (11.1%)" "diaminopimelate biosynthetic process (11.1%) threonine biosynthetic process (11%) lysine biosynthetic process via diaminopimelate (11%)" "protein dimerization activity (11.2%) aspartate-semialdehyde dehydrogenase activity (11.1%) NADP binding (11.1%)" "IPR012280 (19.1%) IPR000534 (18.8%) IPR005986 (18.8%)" "Semialdehyde dehydrogenase, dimerisation domain (19.1%) Semialdehyde dehydrogenase, NAD-binding (18.8%) Aspartate-semialdehyde dehydrogenase, beta-type (18.8%)" ESVSAYEAQVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" AVALKEAMEPEFK root 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.2%) GO:0035999 (14.9%) GO:0032259 (11.2%)" "GO:0005829 (15.2%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0004372 (15.2%) GO:0030170 (15.2%) GO:0008168 (11.2%)" "glycine biosynthetic process from serine (15.2%) tetrahydrofolate interconversion (14.9%) methylation (11.2%)" "cytosol (15.2%) cytoplasm (0.1%) membrane (0%)" "glycine hydroxymethyltransferase activity (15.2%) pyridoxal phosphate binding (15.2%) methyltransferase activity (11.2%)" "IPR015424 (14.4%) IPR039429 (14.4%) IPR049943 (14.4%)" "Pyridoxal phosphate-dependent transferase (14.4%) Serine hydroxymethyltransferase-like domain (14.4%) Serine hydroxymethyltransferase-like (14.4%)" VVIDLSAAYDLTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.4%) GO:0006044 (32.4%)" "GO:0004342 (32.4%) GO:0016853 (2.7%)" "carbohydrate metabolic process (32.4%) N-acetylglucosamine metabolic process (32.4%)" "glucosamine-6-phosphate deaminase activity (32.4%) isomerase activity (2.7%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" ITESEFLWQHNQDPMAVDKLAEGIR root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (24.9%) GO:0006098 (24.2%) GO:0009052 (0.2%)" "GO:0005829 (24.6%) GO:0016020 (0.2%)" "GO:0004801 (25.1%) GO:0016740 (0.7%) GO:0016744 (0.2%)" "carbohydrate metabolic process (24.9%) pentose-phosphate shunt (24.2%) pentose-phosphate shunt, non-oxidative branch (0.2%)" "cytosol (24.6%) membrane (0.2%)" "transaldolase activity (25.1%) transferase activity (0.7%) transketolase or transaldolase activity (0.2%)" "IPR013785 (25.9%) IPR001585 (25.8%) IPR018225 (24.2%)" "Aldolase-type TIM barrel (25.9%) Transaldolase/Fructose-6-phosphate aldolase (25.8%) Transaldolase, active site (24.2%)" AEGDLSENGGYQAAR Actinomycetes Bacteria Bacillati Actinomycetota Actinomycetes "GO:0006354 (20.1%) GO:0032784 (20.1%)" "GO:0003677 (20.1%) GO:0070063 (20.1%) GO:0003746 (19.4%)" "DNA-templated transcription elongation (20.1%) regulation of DNA-templated transcription elongation (20.1%)" "DNA binding (20.1%) RNA polymerase binding (20.1%) translation elongation factor activity (19.4%)" "IPR001437 (14.3%) IPR018151 (14.3%) IPR022691 (14.3%)" "Transcription elongation factor, GreA/GreB, C-terminal (14.3%) Transcription elongation factor, GreA/GreB, conserved site (14.3%) Transcription elongation factor, GreA/GreB, N-terminal (14.3%)" IMECVPNFSEGR Bacteria Bacteria "2.1.2.5 (99.1%) 4.3.1.4 (0.9%)" "glutamate formimidoyltransferase (99.1%) formimidoyltetrahydrofolate cyclodeaminase (0.9%)" "GO:0019556 (16.7%) GO:0019557 (16.7%) GO:0006547 (3.9%)" "GO:0005737 (20.6%) GO:0005814 (0.2%)" "GO:0005542 (20.8%) GO:0030409 (16.5%) GO:0016740 (4.5%)" "L-histidine catabolic process to glutamate and formamide (16.7%) L-histidine catabolic process to glutamate and formate (16.7%) L-histidine metabolic process (3.9%)" "cytoplasm (20.6%) centriole (0.2%)" "folic acid binding (20.8%) glutamate formimidoyltransferase activity (16.5%) transferase activity (4.5%)" "IPR004227 (14.3%) IPR012886 (14.3%) IPR022384 (14.3%)" "Formiminotransferase catalytic domain (14.3%) Formiminotransferase, N-terminal subdomain (14.3%) Formiminotransferase catalytic domain superfamily (14.3%)" MRHYEIVFMVHPDQSEQVPGMIER Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (24.8%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (24.7%) GO:0005840 (0.5%) GO:1990904 (0.1%)" "GO:0003735 (24.9%) GO:0070181 (24.7%) GO:0019843 (0.2%)" "translation (24.8%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.7%) ribosome (0.5%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.9%) small ribosomal subunit rRNA binding (24.7%) rRNA binding (0.2%)" "IPR035980 (20.7%) IPR000529 (20.6%) IPR014717 (20.6%)" "Small ribosomal subunit protein bS6 superfamily (20.7%) Small ribosomal subunit protein bS6 (20.6%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (20.6%)" FHFHCQYDEKDSIGKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.7%) GO:0015966 (12.1%) GO:0044281 (0.5%)" "GO:0005737 (12.7%) GO:0070062 (12.1%) GO:1990742 (12.1%)" "GO:0004820 (12.7%) GO:0005524 (12.7%) GO:0004081 (12.1%)" "glycyl-tRNA aminoacylation (12.7%) diadenosine tetraphosphate biosynthetic process (12.1%) small molecule metabolic process (0.5%)" "cytoplasm (12.7%) extracellular exosome (12.1%) microvesicle (12.1%)" "glycine-tRNA ligase activity (12.7%) ATP binding (12.7%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.1%)" "IPR004154 (11.2%) IPR027031 (11.2%) IPR036621 (11.2%)" "Anticodon-binding (11.2%) Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 (11.2%) Anticodon-binding domain superfamily (11.2%)" VNDVLVFNPNTAYEGNAVEMASLLKIDKEAAAEVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.3%) GO:0043335 (16.3%) GO:0051083 (16.3%)" "GO:0003755 (16.3%) GO:0043022 (16.3%) GO:0044183 (16.3%)" "protein transport (16.3%) protein unfolding (16.3%) 'de novo' cotranslational protein folding (16.3%)" "peptidyl-prolyl cis-trans isomerase activity (16.3%) ribosome binding (16.3%) protein folding chaperone (16.3%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" GLAQGTDVSFGSFGLK root "GO:0006412 (19.7%) GO:0000027 (0.2%) GO:0002181 (0.2%)" "GO:0022625 (19.7%) GO:0005840 (1.5%) GO:0005737 (0.2%)" "GO:0003735 (19.8%) GO:0019843 (19.8%) GO:0000049 (18.7%)" "translation (19.7%) ribosomal large subunit assembly (0.2%) cytoplasmic translation (0.2%)" "cytosolic large ribosomal subunit (19.7%) ribosome (1.5%) cytoplasm (0.2%)" "structural constituent of ribosome (19.8%) rRNA binding (19.8%) tRNA binding (18.7%)" "IPR000114 (20.3%) IPR036920 (20.3%) IPR047873 (20.3%)" "Large ribosomal subunit protein uL16, bacteria (20.3%) Large ribosomal subunit protein uL16 superfamily (20.3%) Large ribosomal subunit protein uL16 (20.3%)" HAQEEMTHMQR Pseudomonadati Bacteria Pseudomonadati "1.16.3.2 (99.3%) 1.16.3.1 (0.7%)" "bacterial non-heme ferritin (99.3%) ferroxidase (0.7%)" "GO:0006879 (14.3%) GO:0006826 (14.2%) GO:0006974 (0%)" "GO:0005829 (14.2%) GO:0005737 (0%)" "GO:0008199 (14.4%) GO:0004322 (14.2%) GO:0008198 (14.2%)" "intracellular iron ion homeostasis (14.3%) iron ion transport (14.2%) DNA damage response (0%)" "cytosol (14.2%) cytoplasm (0%)" "ferric iron binding (14.4%) ferroxidase activity (14.2%) ferrous iron binding (14.2%)" "IPR008331 (16.7%) IPR009040 (16.7%) IPR009078 (16.7%)" "Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%) Ferritin-like superfamily (16.7%)" EVCLLNQEDIMDAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006414 (1.3%) GO:0005737 (49.4%) GO:0003746 (49.4%) translational elongation (1.3%) cytoplasm (49.4%) translation elongation factor activity (49.4%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" GCTLQPNSGAAGEYTGLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" GFGFITPEDGSKDVFVHFSAIQTNGFK root "GO:0010468 (0.2%) GO:0008610 (0.1%) GO:0031564 (0.1%)" "GO:0005829 (48.6%) GO:0005737 (0.4%) GO:0005886 (0.1%)" "GO:0003677 (41.1%) GO:0003676 (8.1%) GO:0001072 (0.1%)" "regulation of gene expression (0.2%) lipid biosynthetic process (0.1%) transcription antitermination (0.1%)" "cytosol (48.6%) cytoplasm (0.4%) plasma membrane (0.1%)" "DNA binding (41.1%) nucleic acid binding (8.1%) transcription antitermination factor activity, RNA binding (0.1%)" "IPR002059 (16.7%) IPR011129 (16.7%) IPR012340 (16.7%)" "Cold-shock protein Csp, DNA-binding (16.7%) Cold-shock domain (16.7%) Nucleic acid-binding, OB-fold (16.7%)" GVTGMDEQAVSTSMK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0046872 (100%) metal ion binding (100%) "IPR000421 (33.3%) IPR008979 (33.3%) IPR013728 (33.3%)" "Coagulation factor 5/8, C-terminal domain (33.3%) Galactose-binding-like domain superfamily (33.3%) BT_3987-like, N-terminal domain (33.3%)" GNADLAIYR root "3.2.1.23 (92.9%) 3.2.1.17 (7.1%)" "beta-galactosidase (92.9%) lysozyme (7.1%)" "GO:0005990 (20.3%) GO:0006355 (1.6%) GO:0009253 (1.6%)" "GO:0009341 (20.3%) GO:0016020 (6.3%) GO:0005576 (1.6%)" "GO:0004565 (20.3%) GO:0030246 (20.3%) GO:0003796 (1.6%)" "lactose catabolic process (20.3%) regulation of DNA-templated transcription (1.6%) peptidoglycan catabolic process (1.6%)" "beta-galactosidase complex (20.3%) membrane (6.3%) extracellular region (1.6%)" "beta-galactosidase activity (20.3%) carbohydrate binding (20.3%) lysozyme activity (1.6%)" "IPR017853 (6.6%) IPR004199 (6.1%) IPR006101 (6.1%)" "Glycoside hydrolase superfamily (6.6%) Beta galactosidase small chain/ domain 5 (6.1%) Glycoside hydrolase, family 2 (6.1%)" VADGTGSAASSIGEVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR053994 (100%) NigD-like, OB domain (100%) STLLNALLNEDKAIVSDIHGTTR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 3.6.-.- (100%) Acting on acid anhydrides (100%) "GO:0002098 (14.3%) GO:0030488 (14.3%)" "GO:0005829 (14.3%) GO:0009507 (0.4%)" "GO:0003924 (14.3%) GO:0005525 (14.3%) GO:0046872 (14.3%)" "tRNA wobble uridine modification (14.3%) tRNA methylation (14.3%)" "cytosol (14.3%) chloroplast (0.4%)" "GTPase activity (14.3%) GTP binding (14.3%) metal ion binding (14.3%)" "IPR004520 (11.2%) IPR005225 (11.2%) IPR006073 (11.2%)" "tRNA modification GTPase MnmE (11.2%) Small GTP-binding domain (11.2%) GTP binding domain (11.2%)" LFVVDTFCGANEATR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.1%) GO:0005829 (17.1%) "GO:0004612 (17.1%) GO:0005524 (17.1%) GO:0046872 (17.1%)" gluconeogenesis (17.1%) cytosol (17.1%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.1%) ATP binding (17.1%) metal ion binding (17.1%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" AICIDFGIAAAHGGVCNLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (24.8%) GO:0005829 (24.8%) "GO:0004819 (24.8%) GO:0005524 (24.8%) GO:0016874 (0.9%)" glutaminyl-tRNA aminoacylation (24.8%) cytosol (24.8%) "glutamine-tRNA ligase activity (24.8%) ATP binding (24.8%) ligase activity (0.9%)" "IPR000924 (10.2%) IPR004514 (10.2%) IPR011035 (10.2%)" "Glutamyl/glutaminyl-tRNA synthetase (10.2%) Glutamine-tRNA synthetase (10.2%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (10.2%)" ILHPTCILPAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.6%) GO:0009090 (17.6%) GO:0009088 (12.5%)" GO:0005829 (17.6%) "GO:0004072 (17.6%) GO:0005524 (17.3%)" "lysine biosynthetic process via diaminopimelate (17.6%) homoserine biosynthetic process (17.6%) threonine biosynthetic process (12.5%)" cytosol (17.6%) "aspartate kinase activity (17.6%) ATP binding (17.3%)" "IPR001048 (14.3%) IPR054352 (14.3%) IPR001341 (14%)" "Aspartate/glutamate/uridylate kinase (14.3%) Aspartokinase, ACT domain (14.3%) Aspartate kinase (14%)" KGEISALMNDFR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002319 (14.3%) IPR004188 (14.3%) IPR004529 (14.3%)" "Phenylalanyl-tRNA synthetase (14.3%) Phenylalanine-tRNA ligase, class II, N-terminal (14.3%) Phenylalanyl-tRNA synthetase, class IIc, alpha subunit (14.3%)" LTDKINIPFHIAEDPLHAVAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0000902 (25.1%) GO:0008360 (25.1%) GO:0043093 (0.3%)" "GO:0005737 (25.1%) GO:0005856 (0.3%) GO:0005886 (0.3%)" GO:0005524 (23.7%) "cell morphogenesis (25.1%) regulation of cell shape (25.1%) FtsZ-dependent cytokinesis (0.3%)" "cytoplasm (25.1%) cytoskeleton (0.3%) plasma membrane (0.3%)" ATP binding (23.7%) "IPR004753 (33.3%) IPR043129 (33.3%) IPR056546 (33.3%)" "Cell shape determining protein MreB (33.3%) ATPase, nucleotide binding domain (33.3%) MreB/MamK-like (33.3%)" EMNIADYDAELWQAMEQEK root 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15%) GO:0035999 (14.4%) GO:0032259 (11.4%)" "GO:0005829 (15%) GO:0016020 (0.1%) GO:0005737 (0%)" "GO:0004372 (15.1%) GO:0030170 (15%) GO:0008168 (11.4%)" "glycine biosynthetic process from serine (15%) tetrahydrofolate interconversion (14.4%) methylation (11.4%)" "cytosol (15%) membrane (0.1%) cytoplasm (0%)" "glycine hydroxymethyltransferase activity (15.1%) pyridoxal phosphate binding (15%) methyltransferase activity (11.4%)" "IPR015424 (14.6%) IPR039429 (14.5%) IPR015421 (14.5%)" "Pyridoxal phosphate-dependent transferase (14.6%) Serine hydroxymethyltransferase-like domain (14.5%) Pyridoxal phosphate-dependent transferase, major domain (14.5%)" AAQYVASHPGEVCPAK root "1.11.1.26 (95.7%) 1.11.1.15 (2.6%) 1.11.1.24 (1.5%)" "NADH-dependent peroxiredoxin (95.7%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (2.6%) thioredoxin-dependent peroxiredoxin (1.5%)" "GO:0006979 (14.8%) GO:0042744 (14.8%) GO:0045454 (14.8%)" "GO:0005829 (14.8%) GO:0005737 (0%) GO:0009321 (0%)" "GO:0008379 (14.8%) GO:0102039 (10.6%) GO:0004601 (0.1%)" "response to oxidative stress (14.8%) hydrogen peroxide catabolic process (14.8%) cell redox homeostasis (14.8%)" "cytosol (14.8%) cytoplasm (0%) alkyl hydroperoxide reductase complex (0%)" "thioredoxin peroxidase activity (14.8%) NADH-dependent peroxiredoxin activity (10.6%) peroxidase activity (0.1%)" "IPR019479 (14.5%) IPR036249 (14.5%) IPR050217 (14.4%)" "Peroxiredoxin, C-terminal (14.5%) Thioredoxin-like superfamily (14.5%) Thiol-specific antioxidant peroxiredoxin (14.4%)" AAAKEVQEQMAEQLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.1.23 (100%) orotidine-5'-phosphate decarboxylase (100%) "GO:0006207 (32.4%) GO:0044205 (32.4%)" "GO:0004590 (32.4%) GO:0016829 (2.9%)" "'de novo' pyrimidine nucleobase biosynthetic process (32.4%) 'de novo' UMP biosynthetic process (32.4%)" "orotidine-5'-phosphate decarboxylase activity (32.4%) lyase activity (2.9%)" "IPR001754 (25%) IPR011060 (25%) IPR011995 (25%)" "Orotidine 5'-phosphate decarboxylase domain (25%) Ribulose-phosphate binding barrel (25%) Orotidine 5'-phosphate decarboxylase, type 2 (25%)" LKEINEDACNADKQELDLLKQNFYK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR007139 (100%) Protein of unknown function DUF349 (100%) TGTSDYNMGLSEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (33.3%) "GO:0015288 (33.3%) GO:0030247 (33.3%)" cell outer membrane (33.3%) "porin activity (33.3%) polysaccharide binding (33.3%)" "IPR006665 (25%) IPR006690 (25%) IPR036737 (25%)" "OmpA-like domain (25%) Outer membrane protein, OmpA-like, conserved site (25%) OmpA-like domain superfamily (25%)" NDYNSNVVQAYFDQKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR041662 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like 2 (50%)" IVGLEIGADDYIPKPFNPR root "GO:0045893 (15.6%) GO:0006355 (4.4%) GO:0000160 (0%)" "GO:0005829 (19.9%) GO:0032993 (19.9%) GO:0005737 (0%)" "GO:0000156 (19.9%) GO:0000976 (19.9%) GO:0000987 (0.1%)" "positive regulation of DNA-templated transcription (15.6%) regulation of DNA-templated transcription (4.4%) phosphorelay signal transduction system (0%)" "cytosol (19.9%) protein-DNA complex (19.9%) cytoplasm (0%)" "phosphorelay response regulator activity (19.9%) transcription cis-regulatory region binding (19.9%) cis-regulatory region sequence-specific DNA binding (0.1%)" "IPR001789 (16.8%) IPR011006 (16.8%) IPR039420 (16.8%)" "Signal transduction response regulator, receiver domain (16.8%) CheY-like superfamily (16.8%) Transcriptional regulatory protein WalR-like (16.8%)" VDGTKPVAEVR root 2.7.4.3 (100%) adenylate kinase (100%) "GO:0044209 (22.6%) GO:0006172 (0.2%) GO:0009123 (0.2%)" "GO:0005737 (24.3%) GO:0005829 (0.2%) GO:0016020 (0.2%)" "GO:0004017 (25.4%) GO:0005524 (24.7%) GO:0016301 (0.9%)" "AMP salvage (22.6%) ADP biosynthetic process (0.2%) nucleoside monophosphate metabolic process (0.2%)" "cytoplasm (24.3%) cytosol (0.2%) membrane (0.2%)" "AMP kinase activity (25.4%) ATP binding (24.7%) kinase activity (0.9%)" "IPR027417 (20.4%) IPR000850 (20.3%) IPR007862 (19.9%)" "P-loop containing nucleoside triphosphate hydrolase (20.4%) Adenylate kinase/UMP-CMP kinase (20.3%) Adenylate kinase, active site lid domain (19.9%)" AMIGNNVSHSKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (24.9%) "GO:0005840 (25.2%) GO:1990904 (24.9%)" GO:0003735 (24.9%) translation (24.9%) "ribosome (25.2%) ribonucleoprotein complex (24.9%)" structural constituent of ribosome (24.9%) "IPR001383 (25%) IPR026569 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL28, bacteria (25%) Large ribosomal subunit protein bL28 (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" IIITEIPYLVNKAELIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006261 (12.5%) GO:0006265 (12.5%)" "GO:0005694 (12.5%) GO:0005737 (12.5%) GO:0009330 (12.5%)" "GO:0003677 (12.5%) GO:0005524 (12.5%) GO:0034335 (12.5%)" "DNA-templated DNA replication (12.5%) DNA topological change (12.5%)" "chromosome (12.5%) cytoplasm (12.5%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.5%)" "DNA binding (12.5%) ATP binding (12.5%) DNA negative supercoiling activity (12.5%)" "IPR002205 (12.5%) IPR005743 (12.5%) IPR006691 (12.5%)" "DNA topoisomerase, type IIA, domain A (12.5%) DNA gyrase, subunit A (12.5%) DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.5%)" GPIFANFVLADEINRAPAK root "3.6.3.- (92%) 3.-.-.- (4%) 6.6.1.1 (4%)" "Acting on acid anhydrides; catalyzing transmembrane movement of substances (92%) Hydrolases (4%) magnesium chelatase (4%)" GO:0006355 (0.1%) "GO:0005524 (49.9%) GO:0016887 (49.9%) GO:0016851 (0.1%)" regulation of DNA-templated transcription (0.1%) "ATP binding (49.9%) ATP hydrolysis activity (49.9%) magnesium chelatase activity (0.1%)" "IPR011703 (25%) IPR050764 (25%) IPR027417 (25%)" "ATPase, AAA-3 (25%) CbbQ/NirQ/NorQ/GpvN (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" SLINNMVVGCSEGYKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0002181 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" cytoplasmic translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000702 (20%) IPR002358 (20%) IPR019906 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, conserved site (20%) Large ribosomal subunit protein uL6, bacteria (20%)" WGITDGLMTTVHSTTATQK Bacteria Bacteria 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (24.2%) GO:0006096 (2.7%)" "GO:0050661 (24.2%) GO:0051287 (24.2%) GO:0004365 (12.6%)" "glucose metabolic process (24.2%) glycolytic process (2.7%)" "NADP binding (24.2%) NAD binding (24.2%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (12.6%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" IVVTGVEMFR Bacillota Bacteria Bacillati Bacillota 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (22.5%) "GO:0003746 (22.5%) GO:0005525 (22.5%) GO:0003924 (18.9%)" cytosol (22.5%) "translation elongation factor activity (22.5%) GTP binding (22.5%) GTPase activity (18.9%)" "IPR004161 (9.2%) IPR009000 (9.2%) IPR050055 (9.2%)" "Translation elongation factor EFTu-like, domain 2 (9.2%) Translation protein, beta-barrel domain superfamily (9.2%) Elongation factor Tu GTPase (9.2%)" ITEFLVNFGNSLGLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" TGVVTSNKMDK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (24.7%) "GO:0022627 (24.7%) GO:0005840 (1.2%)" "GO:0003735 (24.7%) GO:0019843 (24.7%)" translation (24.7%) "cytosolic small ribosomal subunit (24.7%) ribosome (1.2%)" "structural constituent of ribosome (24.7%) rRNA binding (24.7%)" "IPR000266 (25%) IPR012340 (25%) IPR019979 (25%)" "Small ribosomal subunit protein uS17 (25%) Nucleic acid-binding, OB-fold (25%) Small ribosomal subunit protein uS17, conserved site (25%)" HMHGFGSHTYSFINNKNER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" GO:0005737 (16.7%) "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16.7%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" cytoplasm (16.7%) "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16.7%)" "IPR002226 (12.5%) IPR010582 (12.5%) IPR011614 (12.5%)" "Catalase haem-binding site (12.5%) Catalase immune-responsive domain (12.5%) Catalase core domain (12.5%)" AGGKTQTAPVATPQELADYDAIIFGTPTR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.6.5.2 (100%) NAD(P)H dehydrogenase (quinone) (100%) GO:0006979 (0.2%) "GO:0016020 (15.8%) GO:0005829 (0.2%) GO:0032991 (0.2%)" "GO:0010181 (16%) GO:0050660 (14.7%) GO:0050661 (14.7%)" response to oxidative stress (0.2%) "membrane (15.8%) cytosol (0.2%) protein-containing complex (0.2%)" "FMN binding (16%) flavin adenine dinucleotide binding (14.7%) NADP binding (14.7%)" "IPR005025 (20.3%) IPR008254 (20.3%) IPR010089 (20.3%)" "NADPH-dependent FMN reductase-like domain (20.3%) Flavodoxin/nitric oxide synthase (20.3%) Flavoprotein WrbA-like (20.3%)" YGNAFYEEEEGEEPATCQLEDGNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0043093 (33.3%) "GO:0009898 (33.3%) GO:0032153 (33.3%)" FtsZ-dependent cytokinesis (33.3%) "cytoplasmic side of plasma membrane (33.3%) cell division site (33.3%)" "IPR003494 (25%) IPR020823 (25%) IPR043129 (25%)" "SHS2 domain inserted in FtsA (25%) Cell division protein FtsA (25%) ATPase, nucleotide binding domain (25%)" FEFRPLEPGFGITVGNALR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.8%) GO:0005737 (16.6%)" "GO:0003899 (16.7%) GO:0046983 (16.7%) GO:0003677 (16.5%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.6%)" "DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%) DNA binding (16.5%)" "IPR011262 (16.8%) IPR011263 (16.8%) IPR036603 (16.7%)" "DNA-directed RNA polymerase, insert domain (16.8%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) RNA polymerase, RBP11-like subunit (16.7%)" AVFSTPLNEVAVVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000297 (25%) IPR027304 (25%) IPR046357 (25%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (25%) Trigger factor/SurA domain superfamily (25%) Peptidyl-prolyl cis-trans isomerase domain superfamily (25%)" THIDGGSMFNTPPVLPIYSAMQTLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.8%) GO:0008615 (19.8%)" GO:0005737 (19.8%) "GO:0004648 (19.8%) GO:0030170 (19.8%) GO:0008483 (1.2%)" "L-serine biosynthetic process (19.8%) pyridoxine biosynthetic process (19.8%)" cytoplasm (19.8%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.8%) pyridoxal phosphate binding (19.8%) transaminase activity (1.2%)" "IPR000192 (20%) IPR015421 (20%) IPR015422 (20%)" "Aminotransferase class V domain (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" EVSANIIDQCVAQGVPFAR root "1.3.5.1 (99.5%) 1.3.5.4 (0.5%)" "succinate dehydrogenase (99.5%) Transferred entry: 1.3.5.1 (0.5%)" GO:0009061 (18.6%) GO:0005886 (18.6%) "GO:0009055 (18.6%) GO:0050660 (18.6%) GO:0000104 (15.1%)" anaerobic respiration (18.6%) plasma membrane (18.6%) "electron transfer activity (18.6%) flavin adenine dinucleotide binding (18.6%) succinate dehydrogenase activity (15.1%)" "IPR003953 (14.3%) IPR030664 (14.3%) IPR011280 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%)" FCKPQGLVITDSDSFGEKDLEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.2.-.- (100%) Acting on the aldehyde or oxo group of donors (100%) GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.5%) IPR002880 (12.5%) IPR009014 (12.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" AGVVAIFGPGTSVAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (16.7%) IPR006099 (16.7%) IPR006158 (16.7%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-binding domain (16.7%)" QSCEAAVAAIQKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" LVKPWVGGYTGKDPLDNTYTR root "GO:0015833 (20.7%) GO:0015031 (18.6%) GO:0006857 (0.1%)" "GO:0030288 (20.5%) GO:0043190 (18.3%) GO:0005886 (0.1%)" "GO:1904680 (20.7%) GO:1900750 (0.1%)" "peptide transport (20.7%) protein transport (18.6%) oligopeptide transport (0.1%)" "outer membrane-bounded periplasmic space (20.5%) ATP-binding cassette (ABC) transporter complex (18.3%) plasma membrane (0.1%)" "peptide transmembrane transporter activity (20.7%) oligopeptide binding (0.1%)" "IPR039424 (26.3%) IPR000914 (26.1%) IPR030678 (23.6%)" "Solute-binding protein family 5 (26.3%) Solute-binding protein family 5 domain (26.1%) Peptide/nickel binding protein, MppA-type (23.6%)" VNAEYVEAFTKGEVK root "7.1.2.2 (94.3%) 3.6.3.14 (5.2%) 3.6.3.- (0.4%)" "H(+)-transporting two-sector ATPase (94.3%) Transferred entry: 7.1.2.2 (5.2%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (0.4%)" "GO:0015986 (0.2%) GO:0042777 (0.1%)" "GO:0045259 (18.6%) GO:0005886 (17.8%) GO:0005739 (0.1%)" "GO:0005524 (18.6%) GO:0046933 (18.6%) GO:0043531 (18.5%)" "proton motive force-driven ATP synthesis (0.2%) proton motive force-driven plasma membrane ATP synthesis (0.1%)" "proton-transporting ATP synthase complex (18.6%) plasma membrane (17.8%) mitochondrion (0.1%)" "ATP binding (18.6%) proton-transporting ATP synthase activity, rotational mechanism (18.6%) ADP binding (18.5%)" "IPR000194 (10.3%) IPR005294 (10.3%) IPR027417 (10.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.3%) ATP synthase, F1 complex, alpha subunit (10.3%) P-loop containing nucleoside triphosphate hydrolase (10.3%)" ALTDGYNYGNNIHASVSTYR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 1.2.-.- (100%) Acting on the aldehyde or oxo group of donors (100%) GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.5%) IPR002880 (12.5%) IPR009014 (12.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" HTNALFTIK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (24.8%) "GO:0022625 (24.8%) GO:0005840 (0.7%)" "GO:0003735 (24.8%) GO:0008097 (24.8%)" translation (24.8%) "cytosolic large ribosomal subunit (24.8%) ribosome (0.7%)" "structural constituent of ribosome (24.8%) 5S rRNA binding (24.8%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" GMPVSNFLSEEKLQEVAAATMVGGATLTK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25%) GO:0006099 (25%)" "GO:0004459 (25%) GO:0030060 (25%)" "lactate metabolic process (25%) tricarboxylic acid cycle (25%)" "L-lactate dehydrogenase (NAD+) activity (25%) L-malate dehydrogenase (NAD+) activity (25%)" "IPR001236 (17.5%) IPR011275 (17.5%) IPR022383 (17.5%)" "Lactate/malate dehydrogenase, N-terminal (17.5%) Malate dehydrogenase, type 3 (17.5%) Lactate/malate dehydrogenase, C-terminal (17.5%)" DALLENVTVDGEGKIDFADK Heminiphilus faecis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Heminiphilus Heminiphilus faecis 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) KIDSTVSAHGIA Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) "GO:0004314 (95.8%) GO:0016746 (4.2%)" "[acyl-carrier-protein] S-malonyltransferase activity (95.8%) acyltransferase activity (4.2%)" "IPR001227 (14.3%) IPR004410 (14.3%) IPR014043 (14.3%)" "Acyl transferase domain superfamily (14.3%) Malonyl CoA-acyl carrier protein transacylase, FabD-type (14.3%) Acyl transferase domain (14.3%)" ILNTFNPTAPGTYISK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "2.7.2.4 (54.5%) 1.1.1.3 (45.5%)" "aspartate kinase (54.5%) homoserine dehydrogenase (45.5%)" "GO:0009086 (11.1%) GO:0009088 (11.1%) GO:0009089 (11.1%)" "GO:0004072 (11.1%) GO:0004412 (11.1%) GO:0005524 (11.1%)" "methionine biosynthetic process (11.1%) threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%)" "aspartate kinase activity (11.1%) homoserine dehydrogenase activity (11.1%) ATP binding (11.1%)" "IPR001048 (7.3%) IPR001341 (7.3%) IPR001342 (7.3%)" "Aspartate/glutamate/uridylate kinase (7.3%) Aspartate kinase (7.3%) Homoserine dehydrogenase, catalytic (7.3%)" IAAGQPLSIKQEEVHVR root 6.3.4.14 (100%) biotin carboxylase (100%) "GO:0006633 (17.3%) GO:2001295 (13.2%) GO:0045717 (0.2%)" "GO:0005737 (0.2%) GO:0005829 (0.2%) GO:0009317 (0.2%)" "GO:0005524 (18.8%) GO:0046872 (18.5%) GO:0004075 (13.2%)" "fatty acid biosynthetic process (17.3%) malonyl-CoA biosynthetic process (13.2%) negative regulation of fatty acid biosynthetic process (0.2%)" "cytoplasm (0.2%) cytosol (0.2%) acetyl-CoA carboxylase complex (0.2%)" "ATP binding (18.8%) metal ion binding (18.5%) biotin carboxylase activity (13.2%)" "IPR051602 (10.5%) IPR011764 (10.4%) IPR005479 (10.3%)" "Acetyl-CoA Carboxylase Biotin Carboxylase Component (10.5%) Biotin carboxylation domain (10.4%) Carbamoyl phosphate synthase, ATP-binding domain (10.3%)" AINALANPTTNSYKR root 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (15%) GO:0019740 (15%) GO:0009314 (0%)" "GO:0005737 (15%) GO:0016020 (14.9%) GO:0005829 (0%)" "GO:0004356 (15%) GO:0005524 (12.5%) GO:0046872 (12.5%)" "glutamine biosynthetic process (15%) nitrogen utilization (15%) response to radiation (0%)" "cytoplasm (15%) membrane (14.9%) cytosol (0%)" "glutamine synthetase activity (15%) ATP binding (12.5%) metal ion binding (12.5%)" "IPR008146 (14.1%) IPR014746 (14.1%) IPR027303 (12.7%)" "Glutamine synthetase, catalytic domain (14.1%) Glutamine synthetase/guanido kinase, catalytic domain (14.1%) Glutamine synthetase, glycine-rich site (12.7%)" GEKEYLQAVK Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.4.1.4 (87.5%) 1.4.1.2 (12.5%)" "glutamate dehydrogenase (NADP(+)) (87.5%) glutamate dehydrogenase (12.5%)" GO:0006537 (25.5%) "GO:0005829 (25%) GO:0009986 (0.5%)" "GO:0004354 (25.5%) GO:0000166 (23.1%) GO:0004352 (0.5%)" glutamate biosynthetic process (25.5%) "cytosol (25%) cell surface (0.5%)" "glutamate dehydrogenase (NADP+) activity (25.5%) nucleotide binding (23.1%) glutamate dehydrogenase (NAD+) activity (0.5%)" "IPR006097 (12.4%) IPR046346 (12.4%) IPR050724 (12.4%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.4%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (12.4%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (12.4%)" VMDALWANRPHTLIDASGLEVGLPDR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "5.4.2.12 (97.9%) 5.4.2.- (1.4%) 5.4.2.1 (0.7%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (97.9%) Phosphotransferases (phosphomutases) (1.4%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.7%)" "GO:0006007 (20%) GO:0006096 (19.3%) GO:0005975 (0.1%)" "GO:0005829 (20%) GO:0005737 (0.1%)" "GO:0004619 (20%) GO:0030145 (20%) GO:0016853 (0.3%)" "glucose catabolic process (20%) glycolytic process (19.3%) carbohydrate metabolic process (0.1%)" "cytosol (20%) cytoplasm (0.1%)" "phosphoglycerate mutase activity (20%) manganese ion binding (20%) isomerase activity (0.3%)" "IPR005995 (20.2%) IPR006124 (20.2%) IPR017850 (20.2%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.2%) Metalloenzyme (20.2%) Alkaline-phosphatase-like, core domain superfamily (20.2%)" NCATHGAPLGGDAYINTIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" TTIYHIDFSFDNLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (19.9%) GO:0005737 (19.9%) "GO:0004642 (19.9%) GO:0005524 (19.9%) GO:0046872 (19.9%)" 'de novo' IMP biosynthetic process (19.9%) cytoplasm (19.9%) "phosphoribosylformylglycinamidine synthase activity (19.9%) ATP binding (19.9%) metal ion binding (19.9%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" IGFNPDEEIGEGAHKFDVQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.11.4 (95.7%) 3.4.11.- (4.3%)" "tripeptide aminopeptidase (95.7%) Aminopeptidases (4.3%)" "GO:0006508 (16.7%) GO:0043171 (15.9%) GO:0006518 (0.8%)" GO:0005829 (16.7%) "GO:0008237 (16.7%) GO:0008270 (16.7%) GO:0045148 (16.7%)" "proteolysis (16.7%) peptide catabolic process (15.9%) peptide metabolic process (0.8%)" cytosol (16.7%) "metallopeptidase activity (16.7%) zinc ion binding (16.7%) tripeptide aminopeptidase activity (16.7%)" "IPR001261 (20%) IPR002933 (20%) IPR010161 (20%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%) Peptidase M20 (20%) Peptidase M20B, tripeptide aminopeptidase (20%)" GGSGGGGGGSSGGRGSGGGSSGGSIGGR Simiiformes Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Euarchontoglires Primates Haplorrhini Simiiformes "GO:0031424 (8.1%) GO:0045109 (8.1%) GO:0001867 (5%)" "GO:0045095 (10.9%) GO:0005615 (7.4%) GO:0005829 (5.8%)" "GO:0030280 (8.5%) GO:0030246 (5%) GO:0046982 (5%)" "keratinization (8.1%) intermediate filament organization (8.1%) complement activation, lectin pathway (5%)" "keratin filament (10.9%) extracellular space (7.4%) cytosol (5.8%)" "structural constituent of skin epidermis (8.5%) carbohydrate binding (5%) protein heterodimerization activity (5%)" "IPR003054 (20.1%) IPR018039 (20.1%) IPR032449 (20.1%)" "Keratin, type II (20.1%) Intermediate filament protein, conserved site (20.1%) Keratin type II cytoskeletal 1, tail (20.1%)" QHVPVFVTDEMVGHKLGEFAPTR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0000028 (16.1%) GO:0006412 (16.1%) GO:0002181 (0.1%)" "GO:0005737 (16%) GO:0015935 (14.3%) GO:0005840 (2.7%)" "GO:0003735 (16.2%) GO:0019843 (14.5%) GO:0003723 (1.7%)" "ribosomal small subunit assembly (16.1%) translation (16.1%) cytoplasmic translation (0.1%)" "cytoplasm (16%) small ribosomal subunit (14.3%) ribosome (2.7%)" "structural constituent of ribosome (16.2%) rRNA binding (14.5%) RNA binding (1.7%)" "IPR002222 (25.7%) IPR020934 (25.7%) IPR023575 (25.7%)" "Small ribosomal subunit protein uS19 (25.7%) Small ribosomal subunit protein uS19, conserved site (25.7%) Small ribosomal subunit protein uS19, superfamily (25.7%)" TDIYESVEEGANHIACEIAQVIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (31.1%) GO:0006044 (31.1%)" "GO:0004342 (31.1%) GO:0016853 (6.6%)" "carbohydrate metabolic process (31.1%) N-acetylglucosamine metabolic process (31.1%)" "glucosamine-6-phosphate deaminase activity (31.1%) isomerase activity (6.6%)" "IPR003737 (14.3%) IPR004547 (14.3%) IPR006148 (14.3%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.3%) Glucosamine-6-phosphate isomerase (14.3%) Glucosamine/galactosamine-6-phosphate isomerase (14.3%)" YGKQEDGYVNYVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006537 (26.1%) GO:0005829 (23.9%) "GO:0004354 (26.1%) GO:0000166 (23.9%)" glutamate biosynthetic process (26.1%) cytosol (23.9%) "glutamate dehydrogenase (NADP+) activity (26.1%) nucleotide binding (23.9%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" QSLGGLIEAYEAVARR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) "GO:0006189 (20.2%) GO:0009236 (18.4%) GO:0006164 (0.5%)" "GO:0005829 (18.7%) GO:0016020 (0.2%)" "GO:0005524 (20.7%) GO:0004639 (20.5%) GO:0016874 (0.8%)" "'de novo' IMP biosynthetic process (20.2%) cobalamin biosynthetic process (18.4%) purine nucleotide biosynthetic process (0.5%)" "cytosol (18.7%) membrane (0.2%)" "ATP binding (20.7%) phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (20.5%) ligase activity (0.8%)" "IPR028923 (21.5%) IPR018236 (20.5%) IPR050089 (19.5%)" "SAICAR synthetase/ADE2, N-terminal (21.5%) SAICAR synthetase, conserved site (20.5%) SAICAR synthetase (19.5%)" TGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSR Bacteria Bacteria "7.1.2.2 (93%) 3.6.3.14 (4.7%) 7.2.2.1 (2.3%)" "H(+)-transporting two-sector ATPase (93%) Transferred entry: 7.1.2.2 (4.7%) Na(+)-transporting two-sector ATPase (2.3%)" "GO:0005886 (21.6%) GO:0045259 (21.6%)" "GO:0005524 (21.6%) GO:0046933 (21.6%) GO:0016787 (11.6%)" "plasma membrane (21.6%) proton-transporting ATP synthase complex (21.6%)" "ATP binding (21.6%) proton-transporting ATP synthase activity, rotational mechanism (21.6%) hydrolase activity (11.6%)" "IPR000194 (10%) IPR003593 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" CIAGSVADDRK Bacteria Bacteria IPR025964 (100%) GGGtGRT protein (100%) ATSTVTGGYAQSDAQGQMNK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0009279 (50%) GO:0044384 (50%)" "cell outer membrane (50%) host outer membrane (50%)" "IPR000758 (25.5%) IPR051723 (25.5%) IPR011250 (25.2%)" "Virulence-related outer membrane protein (25.5%) Bacterial Outer Membrane Invasion-Related Protein (25.5%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (25.2%)" FRLPASMNQVEYFGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.9%) IPR006103 (7.9%) IPR011013 (7.9%)" "Beta galactosidase small chain/ domain 5 (7.9%) Glycoside hydrolase family 2, catalytic domain (7.9%) Galactose mutarotase-like domain superfamily (7.9%)" TANIALLNYADGEKR Bacteria Bacteria GO:0002181 (20%) GO:0015934 (20%) "GO:0003735 (20%) GO:0016740 (20%) GO:0019843 (19.2%)" cytoplasmic translation (20%) large ribosomal subunit (20%) "structural constituent of ribosome (20%) transferase activity (20%) rRNA binding (19.2%)" "IPR002171 (11.1%) IPR005880 (11.1%) IPR008991 (11.1%)" "Large ribosomal subunit protein uL2 (11.1%) Large ribosomal subunit protein uL2, bacteria/organella (11.1%) Translation protein SH3-like domain superfamily (11.1%)" ATPPFHYQHMFPLGPDKTEYYLLTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (19.2%) "GO:0046872 (20.5%) GO:0051539 (20.5%) GO:0004333 (19.2%)" tricarboxylic acid cycle (19.2%) "metal ion binding (20.5%) 4 iron, 4 sulfur cluster binding (20.5%) fumarate hydratase activity (19.2%)" "IPR004646 (17.4%) IPR051208 (17.4%) IPR004647 (16.3%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (17.4%) Class-I Fumarase/Tartrate Dehydratase (17.4%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.3%)" AAEEAEANALFEQAVQALK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR025347 (100%) Protein of unknown function DUF4251 (100%) RIVNEPTAASLAYGLDKTNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005737 (23.2%) GO:0070013 (2.7%)" "GO:0005524 (25%) GO:0140662 (25%) GO:0051082 (24.1%)" "cytoplasm (23.2%) intracellular organelle lumen (2.7%)" "ATP binding (25%) ATP-dependent protein folding chaperone (25%) unfolded protein binding (24.1%)" "IPR013126 (17%) IPR018181 (17%) IPR043129 (17%)" "Heat shock protein 70 family (17%) Heat shock protein 70, conserved site (17%) ATPase, nucleotide binding domain (17%)" HGYELVNADGEKIGEVTSGTMSPMRK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (15.4%) GO:0032259 (11.1%)" "GO:0005829 (15.4%) GO:0005960 (15.4%)" "GO:0004047 (15.4%) GO:0008483 (15.4%) GO:0008168 (11.1%)" "glycine decarboxylation via glycine cleavage system (15.4%) methylation (11.1%)" "cytosol (15.4%) glycine cleavage complex (15.4%)" "aminomethyltransferase activity (15.4%) transaminase activity (15.4%) methyltransferase activity (11.1%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" VVFSNLQDKFAVTELFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.6%) IPR036373 (33.6%) IPR047859 (32.8%)" "Large ribosomal subunit protein bL17 (33.6%) Large ribosomal subunit protein bL17 superfamily (33.6%) Large ribosomal subunit protein bL17, conserved site (32.8%)" LVSWYDNETGYSNKVLDLIAHISK root "1.2.1.- (86.5%) 1.2.1.12 (13.5%)" "With NAD(+) or NADP(+) as acceptor (86.5%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (13.5%)" "GO:0006006 (19.6%) GO:0072524 (19.3%) GO:0006096 (0.3%)" "GO:0005737 (0.2%) GO:0005576 (0%) GO:0005829 (0%)" "GO:0051287 (19.7%) GO:0050661 (19.6%) GO:0004365 (16.1%)" "glucose metabolic process (19.6%) pyridine-containing compound metabolic process (19.3%) glycolytic process (0.3%)" "cytoplasm (0.2%) extracellular region (0%) cytosol (0%)" "NAD binding (19.7%) NADP binding (19.6%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (16.1%)" "IPR020831 (17.3%) IPR020829 (17.2%) IPR020830 (16.5%)" "Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.3%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.2%) Glyceraldehyde 3-phosphate dehydrogenase, active site (16.5%)" VVDKEGNLCPDAQHLIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) "GO:0004553 (41.7%) GO:0004565 (8.3%)" carbohydrate metabolic process (50%) "hydrolase activity, hydrolyzing O-glycosyl compounds (41.7%) beta-galactosidase activity (8.3%)" "IPR006102 (7.8%) IPR006103 (7.8%) IPR006104 (7.8%)" "Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.8%) Glycoside hydrolase family 2, catalytic domain (7.8%) Glycosyl hydrolases family 2, sugar binding domain (7.8%)" GVSEETTTGVHR root "3.13.2.1 (89%) 3.3.1.1 (10.6%) 3.13.1.9 (0.2%)" "adenosylhomocysteinase (89%) Transferred entry: 3.13.2.1 (10.6%) S-inosyl-L-homocysteine hydrolase (0.2%)" "GO:0033353 (20.6%) GO:0006730 (20.4%) GO:0071269 (17.1%)" "GO:0005829 (20.6%) GO:0016020 (0%) GO:0005743 (0%)" "GO:0004013 (20.6%) GO:0016802 (0.1%) GO:0016787 (0%)" "S-adenosylmethionine cycle (20.6%) one-carbon metabolic process (20.4%) L-homocysteine biosynthetic process (17.1%)" "cytosol (20.6%) membrane (0%) mitochondrial inner membrane (0%)" "adenosylhomocysteinase activity (20.6%) trialkylsulfonium hydrolase activity (0.1%) hydrolase activity (0%)" "IPR000043 (20%) IPR042172 (19.9%) IPR020082 (19.9%)" "Adenosylhomocysteinase-like (20%) Adenosylhomocysteinase-like superfamily (19.9%) S-adenosyl-L-homocysteine hydrolase, conserved site (19.9%)" GRLNVPSLEGPIADELKSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005524 (50%) GO:0003824 (31.3%) GO:0016874 (18.8%)" "ATP binding (50%) catalytic activity (31.3%) ligase activity (18.8%)" "IPR003781 (20%) IPR013815 (20%) IPR016102 (20%)" "CoA-binding (20%) ATP-grasp fold, subdomain 1 (20%) Succinyl-CoA synthetase-like (20%)" DALLENVTVAADGK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.4%) GO:0005829 (17.4%) "GO:0004612 (17.4%) GO:0005524 (17.4%) GO:0046872 (16.8%)" gluconeogenesis (17.4%) cytosol (17.4%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.4%) ATP binding (17.4%) metal ion binding (16.8%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" CHEHINNVLAIPGNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.2.1.49 (75%) 3.2.1.- (25%)" "alpha-N-acetylgalactosaminidase (75%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (25%)" "GO:0000166 (50%) GO:0016798 (44.7%) GO:0008456 (5.3%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (44.7%) alpha-N-acetylgalactosaminidase activity (5.3%)" "IPR000683 (17.4%) IPR006311 (17.4%) IPR036291 (17.4%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (17.4%) Twin-arginine translocation pathway, signal sequence (17.4%) NAD(P)-binding domain superfamily (17.4%)" LKDGDEIKGNQVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006281 (12.9%) GO:0006310 (12.9%) GO:0009432 (11.3%)" GO:0005829 (12.9%) "GO:0003697 (12.9%) GO:0005524 (12.9%) GO:0140664 (12.9%)" "DNA repair (12.9%) DNA recombination (12.9%) SOS response (11.3%)" cytosol (12.9%) "single-stranded DNA binding (12.9%) ATP binding (12.9%) ATP-dependent DNA damage sensor activity (12.9%)" "IPR013765 (11.6%) IPR020584 (11.6%) IPR020587 (11.6%)" "DNA recombination and repair protein RecA (11.6%) DNA recombination/repair protein RecA, conserved site (11.6%) DNA recombination and repair protein RecA, monomer-monomer interface (11.6%)" CFDAANAAAEEKVEAVRK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.- (50%) 5.4.2.2 (50%)" "Phosphotransferases (phosphomutases) (50%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (50%)" "GO:0005975 (23.9%) GO:0006166 (23.9%)" "GO:0000287 (23.9%) GO:0008973 (23.9%) GO:0004614 (4.2%)" "carbohydrate metabolic process (23.9%) purine ribonucleoside salvage (23.9%)" "magnesium ion binding (23.9%) phosphopentomutase activity (23.9%) phosphoglucomutase activity (4.2%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" KVDAFLGKVNAETPVANDILAAAQDVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) RSTIFPNMIGLTIAVHNGR root "GO:0000028 (16.6%) GO:0006412 (16.6%) GO:0002181 (0%)" "GO:0005737 (16.6%) GO:0015935 (16.5%) GO:0005840 (0.3%)" "GO:0003735 (16.6%) GO:0019843 (16.6%) GO:0000049 (0.1%)" "ribosomal small subunit assembly (16.6%) translation (16.6%) cytoplasmic translation (0%)" "cytoplasm (16.6%) small ribosomal subunit (16.5%) ribosome (0.3%)" "structural constituent of ribosome (16.6%) rRNA binding (16.6%) tRNA binding (0.1%)" "IPR002222 (24.8%) IPR023575 (24.8%) IPR005732 (24.8%)" "Small ribosomal subunit protein uS19 (24.8%) Small ribosomal subunit protein uS19, superfamily (24.8%) Small ribosomal subunit protein uS19, bacteria (24.8%)" YDNINLLAHAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR024492 (100%) CT_309/TC_0583-like (100%) IMMEVIRDMGVEK root "4.1.2.4 (99.6%) 4.-.-.- (0.4%)" "deoxyribose-phosphate aldolase (99.6%) Lyases (0.4%)" "GO:0009264 (20.2%) GO:0016052 (20.1%) GO:0006018 (18.5%)" "GO:0005737 (20%) GO:0005829 (0.2%) GO:0016020 (0.1%)" "GO:0004139 (20.2%) GO:0016829 (0.3%) GO:0004645 (0.1%)" "deoxyribonucleotide catabolic process (20.2%) carbohydrate catabolic process (20.1%) 2-deoxyribose 1-phosphate catabolic process (18.5%)" "cytoplasm (20%) cytosol (0.2%) membrane (0.1%)" "deoxyribose-phosphate aldolase activity (20.2%) lyase activity (0.3%) 1,4-alpha-oligoglucan phosphorylase activity (0.1%)" "IPR011343 (25.3%) IPR013785 (25.3%) IPR002915 (25.2%)" "Deoxyribose-phosphate aldolase (25.3%) Aldolase-type TIM barrel (25.3%) DeoC/FbaB/LacD aldolase (25.2%)" EGLNVLQYFISTHGAR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (15.3%) GO:0005975 (0%) GO:0006352 (0%)" "GO:0000428 (15.4%) GO:0005829 (8.7%) GO:0031981 (0%)" "GO:0003899 (15.3%) GO:0003677 (15.3%) GO:0000287 (14.5%)" "DNA-templated transcription (15.3%) carbohydrate metabolic process (0%) DNA-templated transcription initiation (0%)" "DNA-directed RNA polymerase complex (15.4%) cytosol (8.7%) nuclear lumen (0%)" "DNA-directed RNA polymerase activity (15.3%) DNA binding (15.3%) magnesium ion binding (14.5%)" "IPR007081 (9.2%) IPR045867 (9.2%) IPR007083 (9.2%)" "RNA polymerase Rpb1, domain 5 (9.2%) DNA-directed RNA polymerase, subunit beta-prime (9.2%) RNA polymerase Rpb1, domain 4 (9.2%)" LALMEGPDFPIALGVIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.3 (77.8%) 1.2.-.- (22.2%)" "2-oxoglutarate synthase (77.8%) Acting on the aldehyde or oxo group of donors (22.2%)" GO:0044281 (32.6%) "GO:0030976 (33.5%) GO:0016625 (32%) GO:0047553 (1.6%)" small molecule metabolic process (32.6%) "thiamine pyrophosphate binding (33.5%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (32%) 2-oxoglutarate synthase activity (1.6%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" ESGLLGLTEVTSDCR root "2.7.2.1 (99.5%) 2.7.2.15 (0.4%) 2.7.2.- (0.1%)" "acetate kinase (99.5%) propionate kinase (0.4%) Phosphotransferases with a carboxy group as acceptor (0.1%)" "GO:0006083 (16.7%) GO:0006085 (16.4%) GO:0006082 (0%)" "GO:0005829 (16.7%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0008776 (16.7%) GO:0005524 (16.5%) GO:0000287 (16.4%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.4%) organic acid metabolic process (0%)" "cytosol (16.7%) cytoplasm (0%) membrane (0%)" "acetate kinase activity (16.7%) ATP binding (16.5%) magnesium ion binding (16.4%)" "IPR000890 (25.2%) IPR043129 (25.2%) IPR004372 (24.9%)" "Aliphatic acid kinase, short-chain (25.2%) ATPase, nucleotide binding domain (25.2%) Acetate/propionate kinase (24.9%)" DVYHCNEGHAALCNVQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0030170 (33.3%) GO:0008184 (32.5%) GO:0004645 (0.9%)" carbohydrate metabolic process (33.3%) "pyridoxal phosphate binding (33.3%) glycogen phosphorylase activity (32.5%) 1,4-alpha-oligoglucan phosphorylase activity (0.9%)" "IPR011834 (25.2%) IPR024517 (25.2%) IPR052182 (25.2%)" "Alpha-glucan phosphorylase (25.2%) Glycogen phosphorylase, domain of unknown function DUF3417 (25.2%) Glycogen_Maltodextrin_Phosphorylase (25.2%)" ALIEAELEQQKKDIISKLEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.1%) "GO:0022627 (22.6%) GO:0005737 (1.5%) GO:0005840 (1.5%)" "GO:0003729 (24.1%) GO:0003735 (24.1%) GO:0004654 (0.5%)" translation (24.1%) "cytosolic small ribosomal subunit (22.6%) cytoplasm (1.5%) ribosome (1.5%)" "mRNA binding (24.1%) structural constituent of ribosome (24.1%) polyribonucleotide nucleotidyltransferase activity (0.5%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" GLDEYKDEDGNIIYG Bacteroides salyersiae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides salyersiae 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" KYTQEEVEELVAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20.3%) GO:0009263 (18.8%)" "GO:0004748 (20.3%) GO:0031419 (20.3%) GO:0005524 (18.8%)" "DNA biosynthetic process (20.3%) deoxyribonucleotide biosynthetic process (18.8%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.3%) cobalamin binding (20.3%) ATP binding (18.8%)" "IPR000788 (25.5%) IPR013344 (25.5%) IPR050862 (25.5%)" "Ribonucleotide reductase large subunit, C-terminal (25.5%) Ribonucleotide reductase, adenosylcobalamin-dependent (25.5%) Ribonucleoside diphosphate reductase class-2 (25.5%)" GGFILAHWDGTPETEDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.1%) IPR004154 (11.1%) IPR004499 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Anticodon-binding (11.1%) Proline-tRNA ligase, class IIa, archaeal-type (11.1%)" LANNDRDVYQYAQTILEMTIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.2.1.5 (95.5%) 6.2.1.- (4.5%)" "succinate--CoA ligase (ADP-forming) (95.5%) Acid--thiol ligases (4.5%)" "GO:0006099 (13.2%) GO:0006104 (13.2%)" "GO:0005829 (13.2%) GO:0042709 (13.2%)" "GO:0000287 (13.2%) GO:0004775 (13.2%) GO:0005524 (13.2%)" "tricarboxylic acid cycle (13.2%) succinyl-CoA metabolic process (13.2%)" "cytosol (13.2%) succinate-CoA ligase complex (13.2%)" "magnesium ion binding (13.2%) succinate-CoA ligase (ADP-forming) activity (13.2%) ATP binding (13.2%)" "IPR005809 (16.7%) IPR005811 (16.7%) IPR013650 (16.7%)" "Succinate--CoA ligase-like, beta subunit (16.7%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (16.7%) ATP-grasp fold, succinyl-CoA synthetase-type (16.7%)" GYDHEVVDQSAK Coriobacteriales Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0000049 (20%) GO:0003735 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "tRNA binding (20%) structural constituent of ribosome (20%)" "IPR001848 (25%) IPR018268 (25%) IPR027486 (25%)" "Small ribosomal subunit protein uS10 (25%) Small ribosomal subunit protein uS10, conserved site (25%) Small ribosomal subunit protein uS10 domain (25%)" TILEALNTDLVCDAINTAMR root "GO:0016226 (32.7%) GO:0006879 (0.5%)" GO:0005737 (0.5%) "GO:0005506 (32.7%) GO:0051536 (32.7%) GO:0008198 (0.5%)" "iron-sulfur cluster assembly (32.7%) intracellular iron ion homeostasis (0.5%)" cytoplasm (0.5%) "iron ion binding (32.7%) iron-sulfur cluster binding (32.7%) ferrous iron binding (0.5%)" IPR002871 (100%) NIF system FeS cluster assembly, NifU, N-terminal (100%) SEVFHSDEGLKEFVR Bacteroidota Bacteria Pseudomonadati Bacteroidota 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (13.2%) GO:0006261 (11.8%)" "GO:0005694 (11.8%) GO:0005737 (11.8%)" "GO:0003677 (13.2%) GO:0005524 (13.2%) GO:0034335 (11.8%)" "DNA topological change (13.2%) DNA-templated DNA replication (11.8%)" "chromosome (11.8%) cytoplasm (11.8%)" "DNA binding (13.2%) ATP binding (13.2%) DNA negative supercoiling activity (11.8%)" "IPR000565 (7.9%) IPR001241 (7.9%) IPR006171 (7.9%)" "DNA topoisomerase, type IIA, subunit B (7.9%) DNA topoisomerase, type IIA (7.9%) TOPRIM domain (7.9%)" LFELEVPEINDGLITIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006353 (19.5%) GO:0031564 (19.5%)" GO:0005829 (19.5%) "GO:0003700 (19.5%) GO:0003723 (19.5%) GO:0000166 (2.3%)" "DNA-templated transcription termination (19.5%) transcription antitermination (19.5%)" cytosol (19.5%) "DNA-binding transcription factor activity (19.5%) RNA binding (19.5%) nucleotide binding (2.3%)" "IPR009019 (11.7%) IPR010213 (11.7%) IPR012340 (11.7%)" "K homology domain superfamily, prokaryotic type (11.7%) Transcription factor NusA (11.7%) Nucleic acid-binding, OB-fold (11.7%)" KVVIVGCGAQGLNQGLNMR root "1.1.1.86 (99.8%) 1.1.1.169 (0.1%) 1.-.-.- (0.1%)" "ketol-acid reductoisomerase (NADP(+)) (99.8%) 2-dehydropantoate 2-reductase (0.1%) Oxidoreductases (0.1%)" "GO:0009097 (17.4%) GO:0009099 (17.4%) GO:0000002 (0%)" "GO:0005829 (17.3%) GO:0032991 (0%) GO:0042645 (0%)" "GO:0004455 (17.4%) GO:0000287 (16.3%) GO:0016853 (13.1%)" "isoleucine biosynthetic process (17.4%) L-valine biosynthetic process (17.4%) obsolete mitochondrial genome maintenance (0%)" "cytosol (17.3%) protein-containing complex (0%) mitochondrial nucleoid (0%)" "ketol-acid reductoisomerase activity (17.4%) magnesium ion binding (16.3%) isomerase activity (13.1%)" "IPR013023 (16.8%) IPR013116 (16.8%) IPR036291 (16.8%)" "Ketol-acid reductoisomerase (16.8%) Ketol-acid reductoisomerase, N-terminal (16.8%) NAD(P)-binding domain superfamily (16.8%)" IGLFDMILLK Pseudomonadati Bacteria Pseudomonadati 2.4.2.19 (100%) nicotinate-nucleotide diphosphorylase (carboxylating) (100%) "GO:0009435 (24.9%) GO:0034213 (24.9%) GO:0051301 (0.1%)" GO:0005737 (24.9%) "GO:0004514 (24.9%) GO:0016757 (0.1%)" "NAD+ biosynthetic process (24.9%) quinolinate catabolic process (24.9%) cell division (0.1%)" cytoplasm (24.9%) "nicotinate-nucleotide diphosphorylase (carboxylating) activity (24.9%) glycosyltransferase activity (0.1%)" "IPR002638 (14.3%) IPR027277 (14.3%) IPR013785 (14.3%)" "Quinolinate phosphoribosyl transferase, C-terminal (14.3%) Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD (14.3%) Aldolase-type TIM barrel (14.3%)" TVTNEEVGKEELGGAQTHSGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "6.4.1.2 (50%) 6.4.1.3 (50%)" "acetyl-CoA carboxylase (50%) propionyl-CoA carboxylase (50%)" GO:0015977 (19.2%) GO:0009317 (19.2%) "GO:0004658 (31.5%) GO:0003989 (20.5%) GO:0016740 (9.6%)" carbon fixation (19.2%) acetyl-CoA carboxylase complex (19.2%) "propionyl-CoA carboxylase activity (31.5%) acetyl-CoA carboxylase activity (20.5%) transferase activity (9.6%)" "IPR011762 (20.2%) IPR029045 (20.2%) IPR034733 (20.2%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20.2%) ClpP/crotonase-like domain superfamily (20.2%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.2%)" LTKENSDLYASLPEGVAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.4%) GO:0006002 (13.8%)" GO:0005829 (14.4%) "GO:0003872 (14.4%) GO:0005524 (14.4%) GO:0046872 (14.4%)" "response to glucose (14.4%) fructose 6-phosphate metabolic process (13.8%)" cytosol (14.4%) "6-phosphofructokinase activity (14.4%) ATP binding (14.4%) metal ion binding (14.4%)" "IPR000023 (25.3%) IPR011183 (25.3%) IPR035966 (25.3%)" "Phosphofructokinase domain (25.3%) Pyrophosphate-dependent phosphofructokinase PfpB (25.3%) Phosphofructokinase superfamily (25.3%)" FKDEAGEGYLLDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" SQLEEAGATVELK Bacteria Bacteria GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.5%)" "GO:0003729 (24.9%) GO:0003735 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.5%)" "mRNA binding (24.9%) structural constituent of ribosome (24.9%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" TVRPGSVTQIELK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR008964 (50%) IPR013783 (50%)" "Invasin/intimin cell-adhesion fragments (50%) Immunoglobulin-like fold (50%)" MEECKKPIFPILPSIVTAGPEVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005524 (52.9%) GO:0003824 (29.4%) GO:0016874 (17.6%)" "ATP binding (52.9%) catalytic activity (29.4%) ligase activity (17.6%)" "IPR013815 (22%) IPR003781 (19.5%) IPR016102 (19.5%)" "ATP-grasp fold, subdomain 1 (22%) CoA-binding (19.5%) Succinyl-CoA synthetase-like (19.5%)" GNAAIAEEFGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.37 (93.3%) 1.1.1.- (6.7%)" "malate dehydrogenase (93.3%) With NAD(+) or NADP(+) as acceptor (6.7%)" "GO:0006108 (33%) GO:0006099 (1.3%) GO:0019752 (0.3%)" GO:0005737 (1.3%) "GO:0016615 (29.8%) GO:0016616 (29.8%) GO:0030060 (4.4%)" "malate metabolic process (33%) tricarboxylic acid cycle (1.3%) carboxylic acid metabolic process (0.3%)" cytoplasm (1.3%) "malate dehydrogenase activity (29.8%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (29.8%) L-malate dehydrogenase (NAD+) activity (4.4%)" "IPR001236 (17.1%) IPR036291 (17.1%) IPR001557 (16.5%)" "Lactate/malate dehydrogenase, N-terminal (17.1%) NAD(P)-binding domain superfamily (17.1%) L-lactate/malate dehydrogenase (16.5%)" GTVHHPGENVGIGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001684 (50%) IPR018261 (50%)" "Large ribosomal subunit protein bL27 (50%) Large ribosomal subunit protein bL27, conserved site (50%)" KILADGGSIIIGSHLGRPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" MLYPFTFKPILK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (32.4%) "GO:0004476 (32.4%) GO:0008270 (32.4%) GO:0016853 (2.7%)" carbohydrate metabolic process (32.4%) "mannose-6-phosphate isomerase activity (32.4%) zinc ion binding (32.4%) isomerase activity (2.7%)" "IPR011051 (18.3%) IPR014710 (18.3%) IPR014628 (16.9%)" "RmlC-like cupin domain superfamily (18.3%) RmlC-like jelly roll fold (18.3%) Mannose-6-phosphate isomerase, Firmicutes type, short form (16.9%)" NDAGERIPVDVK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0051085 (0.7%) GO:0005737 (13.7%) "GO:0005524 (17.1%) GO:0044183 (17.1%) GO:0046872 (17.1%)" obsolete chaperone cofactor-dependent protein refolding (0.7%) cytoplasm (13.7%) "ATP binding (17.1%) protein folding chaperone (17.1%) metal ion binding (17.1%)" "IPR011032 (27.2%) IPR020818 (27.2%) IPR037124 (27.2%)" "GroES-like superfamily (27.2%) GroES chaperonin family (27.2%) GroES chaperonin superfamily (27.2%)" IKPFKNQAFK root "1.11.1.26 (97.8%) 1.11.1.15 (1.6%) 1.11.1.24 (0.4%)" "NADH-dependent peroxiredoxin (97.8%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (1.6%) thioredoxin-dependent peroxiredoxin (0.4%)" "GO:0006979 (14.6%) GO:0042744 (14.6%) GO:0045454 (14.6%)" "GO:0005829 (14.6%) GO:0016020 (0.1%) GO:0005737 (0%)" "GO:0008379 (14.6%) GO:0102039 (11.7%) GO:0004601 (0.3%)" "response to oxidative stress (14.6%) hydrogen peroxide catabolic process (14.6%) cell redox homeostasis (14.6%)" "cytosol (14.6%) membrane (0.1%) cytoplasm (0%)" "thioredoxin peroxidase activity (14.6%) NADH-dependent peroxiredoxin activity (11.7%) peroxidase activity (0.3%)" "IPR036249 (14.5%) IPR000866 (14.4%) IPR050217 (14.4%)" "Thioredoxin-like superfamily (14.5%) Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (14.4%) Thiol-specific antioxidant peroxiredoxin (14.4%)" VNLVTLTNYEAVLDSALK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25%) GO:0044205 (25%)" "GO:0000287 (25%) GO:0004588 (25%)" "pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" "magnesium ion binding (25%) orotate phosphoribosyltransferase activity (25%)" "IPR000836 (25%) IPR004467 (25%) IPR023031 (25%)" "Phosphoribosyltransferase domain (25%) Orotate phosphoribosyl transferase domain (25%) Orotate phosphoribosyltransferase (25%)" LTITATADEVVVTIKENSGTK NMITGAAQMDGGILVIAATDGPMPQTR Candidatus Limenecus avicola Bacteria Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Candidatus Limenecus Candidatus Limenecus avicola 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20%) "GO:0000287 (20%) GO:0003746 (20%) GO:0003924 (20%)" cytosol (20%) "magnesium ion binding (20%) translation elongation factor activity (20%) GTPase activity (20%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" NSLTLPKEEVEALIADGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004818 (16.7%) GO:0005524 (16.7%)" glutamyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR000924 (10%) IPR001412 (10%) IPR004527 (10%)" "Glutamyl/glutaminyl-tRNA synthetase (10%) Aminoacyl-tRNA synthetase, class I, conserved site (10%) Glutamate-tRNA ligase, bacterial/mitochondrial (10%)" LKNENGLEYTAGQISCANGAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" TIGIVGNQPAFLAGVLDIDASDKAAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (21.7%) GO:0009317 (21.7%) "GO:0003989 (21.7%) GO:0004658 (21.7%) GO:0016740 (13%)" carbon fixation (21.7%) acetyl-CoA carboxylase complex (21.7%) "acetyl-CoA carboxylase activity (21.7%) propionyl-CoA carboxylase activity (21.7%) transferase activity (13%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" TDLSGNNTQAEAPQPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (10.9%) GO:0017038 (10.9%) GO:0043952 (10.9%)" "GO:0005829 (10.9%) GO:0005886 (10.9%) GO:0031522 (10.9%)" "GO:0005524 (10.9%) GO:0046872 (10.9%) GO:0008564 (1.6%)" "protein targeting (10.9%) protein import (10.9%) protein transport by the Sec complex (10.9%)" "cytosol (10.9%) plasma membrane (10.9%) cell envelope Sec protein transport complex (10.9%)" "ATP binding (10.9%) metal ion binding (10.9%) protein-exporting ATPase activity (1.6%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" KYVKDHDLGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.4 (100%) leucine--tRNA ligase (100%) GO:0006429 (20%) GO:0005829 (20%) "GO:0002161 (20%) GO:0004823 (20%) GO:0005524 (20%)" leucyl-tRNA aminoacylation (20%) cytosol (20%) "aminoacyl-tRNA deacylase activity (20%) leucine-tRNA ligase activity (20%) ATP binding (20%)" "IPR001412 (12.5%) IPR002302 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Leucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" IQYLDDLNKLVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" KGSSLQQGFQKPAQAVNR root "GO:0006413 (0.1%) GO:0009409 (0%) GO:0061077 (0%)" "GO:0005829 (20%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0003743 (20.9%) GO:0005525 (20%) GO:0003924 (19.8%)" "translational initiation (0.1%) response to cold (0%) obsolete chaperone-mediated protein folding (0%)" "cytosol (20%) cytoplasm (0.1%) membrane (0%)" "translation initiation factor activity (20.9%) GTP binding (20%) GTPase activity (19.8%)" "IPR006847 (7.4%) IPR015760 (7.3%) IPR027417 (7.3%)" "Translation initiation factor IF-2, N-terminal (7.4%) Translation initiation factor IF- 2 (7.3%) P-loop containing nucleoside triphosphate hydrolase (7.3%)" GISYETATFPWAASGR root "1.8.1.4 (99.8%) 1.-.-.- (0.1%) 1.8.1.7 (0.1%)" "dihydrolipoyl dehydrogenase (99.8%) Oxidoreductases (0.1%) glutathione-disulfide reductase (0.1%)" "GO:0006103 (20.3%) GO:0006979 (20.1%) GO:0006090 (0%)" "GO:0005737 (18.4%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0004148 (20.3%) GO:0050660 (20.3%) GO:0016491 (0.2%)" "2-oxoglutarate metabolic process (20.3%) response to oxidative stress (20.1%) pyruvate metabolic process (0%)" "cytoplasm (18.4%) cytosol (0%) plasma membrane (0%)" "dihydrolipoyl dehydrogenase (NADH) activity (20.3%) flavin adenine dinucleotide binding (20.3%) oxidoreductase activity (0.2%)" "IPR004099 (12.8%) IPR016156 (12.8%) IPR050151 (12.8%)" "Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.8%) FAD/NAD-linked reductase, dimerisation domain superfamily (12.8%) Class-I pyridine nucleotide-disulfide oxidoreductase (12.8%)" EVINKLPMEFAVEAQK root GO:0016226 (99.8%) GO:1990229 (0.2%) iron-sulfur cluster assembly (99.8%) iron-sulfur cluster assembly complex (0.2%) "IPR055346 (20.1%) IPR000825 (20.1%) IPR037284 (20.1%)" "SUF system FeS cluster assembly, SufBD (20.1%) SUF system FeS cluster assembly, SufBD core domain (20.1%) SUF system FeS cluster assembly, SufBD superfamily (20.1%)" TGVGGGVMGVMPGVMGIAAFAPPLDDAGNSVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" AAYNAAIDKFEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016740 (100%) transferase activity (100%) "IPR011990 (44.8%) IPR019734 (44.8%) IPR013105 (10.3%)" "Tetratricopeptide-like helical domain superfamily (44.8%) Tetratricopeptide repeat (44.8%) Tetratricopeptide repeat 2 (10.3%)" LASNSLIEAVVYADAAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.3.16 (100%) L-aspartate oxidase (100%) "GO:0034628 (34.2%) GO:0006508 (0.2%)" GO:0005737 (31.2%) "GO:0008734 (34.2%) GO:0016491 (0.2%)" "'de novo' NAD+ biosynthetic process from L-aspartate (34.2%) proteolysis (0.2%)" cytoplasm (31.2%) "L-aspartate oxidase activity (34.2%) oxidoreductase activity (0.2%)" "IPR003953 (16.7%) IPR005288 (16.7%) IPR015939 (16.7%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (16.7%) L-aspartate oxidase (16.7%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (16.7%)" VIMLAAVVAALVSCQSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR007298 (100%) Copper resistance lipoprotein NlpE (100%) SEFITVARPYAK root 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0015986 (0.2%) GO:0042777 (0.2%)" "GO:0005886 (29.4%) GO:0045259 (29.4%) GO:0012505 (0.2%)" "GO:0046933 (29.6%) GO:0016787 (10.8%) GO:0046961 (0.2%)" "proton motive force-driven ATP synthesis (0.2%) proton motive force-driven plasma membrane ATP synthesis (0.2%)" "plasma membrane (29.4%) proton-transporting ATP synthase complex (29.4%) endomembrane system (0.2%)" "proton-transporting ATP synthase activity, rotational mechanism (29.6%) hydrolase activity (10.8%) proton-transporting ATPase activity, rotational mechanism (0.2%)" "IPR026015 (33.4%) IPR000711 (33.2%) IPR020781 (32.7%)" "F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily (33.4%) ATPase, OSCP/delta subunit (33.2%) ATPase, OSCP/delta subunit, conserved site (32.7%)" KVVMGEGDDSQVSFEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0000977 (50%) GO:0032422 (50%)" "RNA polymerase II transcription regulatory region sequence-specific DNA binding (50%) purine-rich negative regulatory element binding (50%)" IPR006628 (100%) Purine-rich element binding protein family (100%) VGIVAVHLYRPFSAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (69.6%) 1.2.7.- (21.7%) 1.2.1.51 (8.7%)" "pyruvate synthase (69.6%) With an iron-sulfur protein as acceptor (21.7%) pyruvate dehydrogenase (NADP(+)) (8.7%)" "GO:0006979 (14.8%) GO:0022900 (14.8%) GO:0044281 (11.5%)" "GO:0005506 (14.8%) GO:0051539 (14.8%) GO:0030976 (14.5%)" "response to oxidative stress (14.8%) electron transport chain (14.8%) small molecule metabolic process (11.5%)" "iron ion binding (14.8%) 4 iron, 4 sulfur cluster binding (14.8%) thiamine pyrophosphate binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" ASDVLLNGGKSESYAIVPDYYNGILPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (20%) IPR011053 (20%) IPR022615 (20%)" "Na(+)-translocating NADH-quinone reductase subunit A (20%) Single hybrid motif (20%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (20%)" LKSYDHNLVDK Pseudomonadati Bacteria Pseudomonadati GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%) GO:0015935 (0%)" "GO:0003735 (20%) GO:0000049 (19.5%) GO:0003723 (0.5%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%) small ribosomal subunit (0%)" "structural constituent of ribosome (20%) tRNA binding (19.5%) RNA binding (0.5%)" "IPR001848 (25%) IPR027486 (25%) IPR036838 (25%)" "Small ribosomal subunit protein uS10 (25%) Small ribosomal subunit protein uS10 domain (25%) Small ribosomal subunit protein uS10 domain superfamily (25%)" TYPASQLQASGENVGLPDGQMGNSEVGHLNIGAGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" IHEMTALLVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.22 (100%) histidine decarboxylase (100%) "GO:0006520 (47.4%) GO:0006547 (2.6%)" "GO:0016831 (44.7%) GO:0004398 (5.3%)" "amino acid metabolic process (47.4%) L-histidine metabolic process (2.6%)" "carboxy-lyase activity (44.7%) histidine decarboxylase activity (5.3%)" "IPR016104 (76%) IPR016105 (20%) IPR003427 (4%)" "Pyruvoyl-dependent histidine/arginine decarboxylase (76%) Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain (20%) Histidine decarboxylase proenzyme (4%)" IAYEPVWAIGTGK root "5.3.1.1 (99.1%) 4.2.3.3 (0.5%) 2.7.2.3 (0.2%)" "triose-phosphate isomerase (99.1%) methylglyoxal synthase (0.5%) phosphoglycerate kinase (0.2%)" "GO:0006096 (16%) GO:0006094 (16%) GO:0046166 (15.8%)" "GO:0005829 (15.8%) GO:0016020 (0.1%) GO:0020015 (0.1%)" "GO:0004807 (16.2%) GO:0008929 (1.6%) GO:0016829 (0.8%)" "glycolytic process (16%) gluconeogenesis (16%) glyceraldehyde-3-phosphate biosynthetic process (15.8%)" "cytosol (15.8%) membrane (0.1%) glycosome (0.1%)" "triose-phosphate isomerase activity (16.2%) methylglyoxal synthase activity (1.6%) lyase activity (0.8%)" "IPR000652 (20.2%) IPR020861 (20.2%) IPR013785 (20.1%)" "Triosephosphate isomerase (20.2%) Triosephosphate isomerase, active site (20.2%) Aldolase-type TIM barrel (20.1%)" GAFGEAEAEAKFEAWK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" SLQTLLGHGR Pseudomonadati Bacteria Pseudomonadati 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (49.7%) "GO:0004332 (49.7%) GO:0016829 (0.6%)" glycolytic process (49.7%) "fructose-bisphosphate aldolase activity (49.7%) lyase activity (0.6%)" "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" VNLMDAASPDSDTPVAFGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.1.13 (100%) glutamate synthase (NADPH) (100%) "GO:0051536 (49.1%) GO:0016491 (34.5%) GO:0004355 (14.5%)" "iron-sulfur cluster binding (49.1%) oxidoreductase activity (34.5%) glutamate synthase (NADPH) activity (14.5%)" "IPR001433 (10%) IPR006004 (10%) IPR009051 (10%)" "Oxidoreductase FAD/NAD(P)-binding (10%) Sulfide dehydrogenase subunit alpha-like (10%) Alpha-helical ferredoxin (10%)" ANINPAHVDSEDHMESNMAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005737 (48.9%) GO:0003746 (51.1%) cytoplasm (48.9%) translation elongation factor activity (51.1%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" MRLEFSIYR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "1.3.5.1 (99.4%) 1.3.5.4 (0.6%)" "succinate dehydrogenase (99.4%) Transferred entry: 1.3.5.1 (0.6%)" "GO:0022904 (12.7%) GO:0006099 (12.6%) GO:0009060 (0.2%)" "GO:0005886 (0.1%) GO:0016020 (0.1%)" "GO:0009055 (12.7%) GO:0051539 (12.1%) GO:0046872 (12.1%)" "respiratory electron transport chain (12.7%) tricarboxylic acid cycle (12.6%) aerobic respiration (0.2%)" "plasma membrane (0.1%) membrane (0.1%)" "electron transfer activity (12.7%) 4 iron, 4 sulfur cluster binding (12.1%) metal ion binding (12.1%)" "IPR012675 (11.3%) IPR036010 (11.3%) IPR001041 (11.3%)" "Beta-grasp domain superfamily (11.3%) 2Fe-2S ferredoxin-like superfamily (11.3%) 2Fe-2S ferredoxin-type iron-sulfur binding domain (11.3%)" LMAAELYKPFIIRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) GO:0000428 (17%) "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (15.5%)" DNA-templated transcription (17%) DNA-directed RNA polymerase complex (17%) "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (15.5%)" "IPR000722 (9.2%) IPR006592 (9.2%) IPR007080 (9.2%)" "RNA polymerase, alpha subunit (9.2%) RNA polymerase, N-terminal (9.2%) RNA polymerase Rpb1, domain 1 (9.2%)" FFIDTANIDQIR root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (17%) GO:0006098 (16.4%) GO:0042182 (16.2%)" GO:0005737 (17%) "GO:0016832 (17%) GO:0004801 (16.4%)" "carbohydrate metabolic process (17%) pentose-phosphate shunt (16.4%) ketone catabolic process (16.2%)" cytoplasm (17%) "aldehyde-lyase activity (17%) transaldolase activity (16.4%)" "IPR001585 (16.8%) IPR013785 (16.8%) IPR018225 (16.8%)" "Transaldolase/Fructose-6-phosphate aldolase (16.8%) Aldolase-type TIM barrel (16.8%) Transaldolase, active site (16.8%)" YHQVSTDEVYGSLGAEGYFHETTPLCPHSPYSASK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.46 (100%) dTDP-glucose 4,6-dehydratase (100%) GO:0009225 (50%) GO:0008460 (50%) nucleotide-sugar metabolic process (50%) dTDP-glucose 4,6-dehydratase activity (50%) "IPR016040 (33.8%) IPR036291 (33.8%) IPR005888 (32.4%)" "NAD(P)-binding domain (33.8%) NAD(P)-binding domain superfamily (33.8%) dTDP-glucose 4,6-dehydratase (32.4%)" IMVNAHEAVRPTGLCR Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.2.1.22 (45.1%) 3.2.1.3 (27.5%) 3.2.1.- (13.7%)" "alpha-galactosidase (45.1%) glucan 1,4-alpha-glucosidase (27.5%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (13.7%)" GO:0016020 (0.1%) "GO:0030246 (59.1%) GO:0016787 (33.7%) GO:0004557 (2.8%)" membrane (0.1%) "carbohydrate binding (59.1%) hydrolase activity (33.7%) alpha-galactosidase activity (2.8%)" "IPR019563 (14.4%) IPR052720 (14.4%) IPR013785 (14.3%)" "Glycosyl-hydrolase 97, catalytic domain (14.4%) Glycosyl Hydrolase Family 97 (14.4%) Aldolase-type TIM barrel (14.3%)" GLINDPHMDNSFQINDGLR Pseudomonadati Bacteria Pseudomonadati 2.5.1.54 (100%) 3-deoxy-7-phosphoheptulonate synthase (100%) "GO:0008652 (17.2%) GO:0009073 (17.2%) GO:0009423 (14.6%)" "GO:0005737 (17.2%) GO:0005829 (0%)" "GO:0003849 (17.2%) GO:0042802 (16.5%) GO:0016740 (0.1%)" "amino acid biosynthetic process (17.2%) aromatic amino acid family biosynthetic process (17.2%) chorismate biosynthetic process (14.6%)" "cytoplasm (17.2%) cytosol (0%)" "3-deoxy-7-phosphoheptulonate synthase activity (17.2%) identical protein binding (16.5%) transferase activity (0.1%)" "IPR006218 (33.3%) IPR006219 (33.3%) IPR013785 (33.3%)" "DAHP synthetase I/KDSA (33.3%) DAHP synthase, class 1 (33.3%) Aldolase-type TIM barrel (33.3%)" AHPDVFNILLQVLDDGR root "3.6.1.15 (50%) 6.2.1.5 (50%)" "nucleoside-triphosphate phosphatase (50%) succinate--CoA ligase (ADP-forming) (50%)" "GO:0034605 (18.1%) GO:0042026 (14.7%) GO:0006508 (3.3%)" "GO:0005737 (12%) GO:0005829 (6.1%) GO:0009536 (0%)" "GO:0005524 (18.1%) GO:0016887 (18.1%) GO:0042802 (6.1%)" "cellular response to heat (18.1%) protein refolding (14.7%) proteolysis (3.3%)" "cytoplasm (12%) cytosol (6.1%) plastid (0%)" "ATP binding (18.1%) ATP hydrolysis activity (18.1%) identical protein binding (6.1%)" "IPR003959 (8.5%) IPR050130 (8.5%) IPR027417 (8.5%)" "ATPase, AAA-type, core (8.5%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.5%) P-loop containing nucleoside triphosphate hydrolase (8.5%)" MIKPAISNLIWGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR032573 (100%) Protein of unknown function DUF4925 (100%) GAQEAHEAIRPTYISNDEISGTAQEKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.6.2.1 (100%) DNA topoisomerase (100%) GO:0006265 (25%) "GO:0003677 (25%) GO:0003917 (25%) GO:0046872 (25%)" DNA topological change (25%) "DNA binding (25%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25%) metal ion binding (25%)" "IPR000380 (7.1%) IPR003601 (7.1%) IPR003602 (7.1%)" "DNA topoisomerase, type IA (7.1%) DNA topoisomerase, type IA, domain 2 (7.1%) DNA topoisomerase, type IA, DNA-binding domain (7.1%)" GALENPETKDDAK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae GO:0016740 (100%) transferase activity (100%) "IPR011990 (35.7%) IPR019734 (35.7%) IPR051685 (28.6%)" "Tetratricopeptide-like helical domain superfamily (35.7%) Tetratricopeptide repeat (35.7%) Ycf3/AcsC/BcsC/TPR Multifunctional (28.6%)" KRPAMYIGDISVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.6.2.2 (98%) 5.99.1.3 (2%)" "DNA topoisomerase (ATP-hydrolyzing) (98%) Transferred entry: 5.6.2.2 (2%)" "GO:0006265 (12.9%) GO:0006261 (11.5%) GO:0032259 (0.3%)" "GO:0005694 (12.1%) GO:0005737 (11.5%)" "GO:0003677 (12.9%) GO:0005524 (12.9%) GO:0046872 (12.6%)" "DNA topological change (12.9%) DNA-templated DNA replication (11.5%) methylation (0.3%)" "chromosome (12.1%) cytoplasm (11.5%)" "DNA binding (12.9%) ATP binding (12.9%) metal ion binding (12.6%)" "IPR000565 (7.5%) IPR001241 (7.5%) IPR003594 (7.5%)" "DNA topoisomerase, type IIA, subunit B (7.5%) DNA topoisomerase, type IIA (7.5%) Histidine kinase/HSP90-like ATPase domain (7.5%)" SPVILQVSK root "4.1.2.13 (99%) 4.1.2.- (1%)" "fructose-bisphosphate aldolase (99%) Aldehyde-lyases (1%)" "GO:0006096 (23%) GO:0030388 (22%) GO:0005975 (2.9%)" GO:0016020 (0.1%) "GO:0008270 (26%) GO:0004332 (23%) GO:0016832 (3%)" "glycolytic process (23%) fructose 1,6-bisphosphate metabolic process (22%) carbohydrate metabolic process (2.9%)" membrane (0.1%) "zinc ion binding (26%) fructose-bisphosphate aldolase activity (23%) aldehyde-lyase activity (3%)" "IPR000771 (26%) IPR013785 (26%) IPR050246 (25.9%)" "Fructose-bisphosphate aldolase, class-II (26%) Aldolase-type TIM barrel (26%) Class II Fructose-bisphosphate Aldolase (25.9%)" VTITDVAAEGK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "2.1.1.190 (71.5%) 2.1.1.- (17.7%) 2.1.1.189 (10.8%)" "23S rRNA (uracil(1939)-C(5))-methyltransferase (71.5%) Methyltransferases (17.7%) 23S rRNA (uracil(747)-C(5))-methyltransferase (10.8%)" "GO:0070475 (49.3%) GO:0032259 (0.7%)" "GO:0070041 (49.3%) GO:0008168 (0.7%)" "rRNA base methylation (49.3%) methylation (0.7%)" "rRNA (uridine-C5-)-methyltransferase activity (49.3%) methyltransferase activity (0.7%)" "IPR002792 (16.8%) IPR010280 (16.8%) IPR012340 (16.8%)" "TRAM domain (16.8%) (Uracil-5)-methyltransferase family (16.8%) Nucleic acid-binding, OB-fold (16.8%)" DGTFIEKFESGGVSPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR015943 (58.3%) IPR031815 (41.7%)" "WD40/YVTN repeat-like-containing domain superfamily (58.3%) Protein of unknown function DUF5074 (41.7%)" ALQEGDKVSLIGFGTFSVAER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0030261 (12.2%) GO:0006270 (10.2%) GO:0006351 (10.2%)" "GO:0005829 (12.2%) GO:1990103 (10.2%) GO:1990178 (10.2%)" "GO:0003677 (12.2%) GO:0030527 (12.2%) GO:0042802 (10.2%)" "chromosome condensation (12.2%) DNA replication initiation (10.2%) DNA-templated transcription (10.2%)" "cytosol (12.2%) DnaA-HU complex (10.2%) HU-DNA complex (10.2%)" "DNA binding (12.2%) structural constituent of chromatin (12.2%) identical protein binding (10.2%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" FNNGEEGGER Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (32.4%) "GO:0003723 (32.4%) GO:0120159 (32.4%) GO:0016829 (2.9%)" enzyme-directed rRNA pseudouridine synthesis (32.4%) "RNA binding (32.4%) rRNA pseudouridine synthase activity (32.4%) lyase activity (2.9%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" ITGVIPVDQAVEQMKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.1 (70.6%) 1.2.7.- (29.4%)" "pyruvate synthase (70.6%) With an iron-sulfur protein as acceptor (29.4%)" "GO:0006979 (14.9%) GO:0022900 (14.9%) GO:0044281 (10.4%)" "GO:0005506 (14.9%) GO:0030976 (14.9%) GO:0051539 (14.9%)" "response to oxidative stress (14.9%) electron transport chain (14.9%) small molecule metabolic process (10.4%)" "iron ion binding (14.9%) thiamine pyrophosphate binding (14.9%) 4 iron, 4 sulfur cluster binding (14.9%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" KAEAGELCVSSISVDCATTLKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (24.5%) "GO:0022625 (22.4%) GO:0005840 (2%) GO:1990904 (2%)" "GO:0003735 (24.5%) GO:0019843 (24.5%)" translation (24.5%) "cytosolic large ribosomal subunit (22.4%) ribosome (2%) ribonucleoprotein complex (2%)" "structural constituent of ribosome (24.5%) rRNA binding (24.5%)" "IPR001063 (26.1%) IPR036394 (26.1%) IPR005727 (23.9%)" "Large ribosomal subunit protein uL22 (26.1%) Ribosomal protein uL22 superfamily (26.1%) Large ribosomal subunit protein uL22, bacterial/chloroplast-type (23.9%)" MLNVVIFGAPGSGK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.4.3 (100%) adenylate kinase (100%) GO:0044209 (23.9%) GO:0005737 (23.9%) "GO:0004017 (26.1%) GO:0005524 (26.1%)" AMP salvage (23.9%) cytoplasm (23.9%) "AMP kinase activity (26.1%) ATP binding (26.1%)" "IPR000850 (32.9%) IPR027417 (32.9%) IPR033690 (32.9%)" "Adenylate kinase/UMP-CMP kinase (32.9%) P-loop containing nucleoside triphosphate hydrolase (32.9%) Adenylate kinase, conserved site (32.9%)" DVKEAVKEINPDTDSLGSRG Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis FFESESLTEDEMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.2%) "GO:0003746 (25.2%) GO:0005525 (25.2%) GO:0003924 (24.5%)" ribosome disassembly (25.2%) "translation elongation factor activity (25.2%) GTP binding (25.2%) GTPase activity (24.5%)" "IPR009000 (7.8%) IPR027417 (7.8%) IPR000640 (7.6%)" "Translation protein, beta-barrel domain superfamily (7.8%) P-loop containing nucleoside triphosphate hydrolase (7.8%) Elongation factor EFG, domain V-like (7.6%)" FKGEESTAEIGDNNIIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.129 (100%) acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (100%) "GO:0009245 (31%) GO:0008610 (2.4%)" GO:0016020 (31%) "GO:0008780 (33.3%) GO:0046872 (2.4%)" "lipid A biosynthetic process (31%) lipid biosynthetic process (2.4%)" membrane (31%) "acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity (33.3%) metal ion binding (2.4%)" "IPR001451 (20%) IPR010137 (20%) IPR011004 (20%)" "Hexapeptide repeat (20%) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (20%) Trimeric LpxA-like superfamily (20%)" TSDTIVSYGER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.3 (50.2%) 2.7.2.4 (49.8%)" "homoserine dehydrogenase (50.2%) aspartate kinase (49.8%)" "GO:0009088 (11.1%) GO:0009086 (11%) GO:0009089 (11%)" GO:0005829 (0.1%) "GO:0004072 (11.2%) GO:0004412 (11.2%) GO:0005524 (11.2%)" "threonine biosynthetic process (11.1%) methionine biosynthetic process (11%) lysine biosynthetic process via diaminopimelate (11%)" cytosol (0.1%) "aspartate kinase activity (11.2%) homoserine dehydrogenase activity (11.2%) ATP binding (11.2%)" "IPR001048 (7.3%) IPR001341 (7.3%) IPR005106 (7.3%)" "Aspartate/glutamate/uridylate kinase (7.3%) Aspartate kinase (7.3%) Aspartate/homoserine dehydrogenase, NAD-binding (7.3%)" GYDLEDIAHALLKEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.3.1 (100%) citrate (Si)-synthase (100%) "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (25%) "GO:0036440 (22.2%) GO:0046912 (2.8%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (25%) "citrate synthase activity (22.2%) acyltransferase activity, acyl groups converted into alkyl on transfer (2.8%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" MGNMTGAYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" TKPWGTNHAVMMGADVIQEPFAVINCDDFYGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.1.13 (100%) glutamate synthase (NADPH) (100%) "GO:0016740 (92.9%) GO:0004355 (7.1%)" "transferase activity (92.9%) glutamate synthase (NADPH) activity (7.1%)" IPR029044 (100%) Nucleotide-diphospho-sugar transferases (100%) INGFTYVQTEFDYFTGELK Bacteria Bacteria IPR025964 (100%) GGGtGRT protein (100%) AKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPK root 2.5.1.6 (100%) methionine adenosyltransferase (100%) "GO:0006556 (16.9%) GO:0006730 (16.1%) GO:0033353 (0%)" "GO:0005737 (16%) GO:0005829 (0.1%)" "GO:0004478 (16.9%) GO:0005524 (16.9%) GO:0000287 (15.9%)" "S-adenosylmethionine biosynthetic process (16.9%) one-carbon metabolic process (16.1%) S-adenosylmethionine cycle (0%)" "cytoplasm (16%) cytosol (0.1%)" "methionine adenosyltransferase activity (16.9%) ATP binding (16.9%) magnesium ion binding (15.9%)" "IPR002133 (16.9%) IPR022628 (16.9%) IPR022636 (16.9%)" "S-adenosylmethionine synthetase (16.9%) S-adenosylmethionine synthetase, N-terminal (16.9%) S-adenosylmethionine synthetase superfamily (16.9%)" VALENAASIAGMFLTTECVIAEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17%) GO:0005737 (16.3%) "GO:0005524 (17%) GO:0140662 (17%) GO:0016853 (16.3%)" protein refolding (17%) cytoplasm (16.3%) "ATP binding (17%) ATP-dependent protein folding chaperone (17%) isomerase activity (16.3%)" "IPR001844 (17.3%) IPR002423 (17.3%) IPR027413 (17.3%)" "Chaperonin Cpn60/GroEL (17.3%) Chaperonin Cpn60/GroEL/TCP-1 family (17.3%) GroEL-like equatorial domain superfamily (17.3%)" TLTEMMYSPVQQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.99.- (100%) With other acceptors (100%) "GO:0016491 (33.3%) GO:0046872 (33.3%) GO:0051539 (33.3%)" "oxidoreductase activity (33.3%) metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (33.3%)" "IPR007197 (16.7%) IPR013785 (16.7%) IPR023867 (16.7%)" "Radical SAM (16.7%) Aldolase-type TIM barrel (16.7%) Anaerobic sulphatase maturase, radical SAM (16.7%)" LAQMQQLSHQDDDSAAAAALAAQTGER root 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0017038 (10.8%) GO:0006605 (10.7%) GO:0043952 (10.6%)" "GO:0005886 (10.7%) GO:0005829 (10.6%) GO:0031522 (10.6%)" "GO:0005524 (10.7%) GO:0046872 (10.6%) GO:0008564 (2.6%)" "protein import (10.8%) protein targeting (10.7%) protein transport by the Sec complex (10.6%)" "plasma membrane (10.7%) cytosol (10.6%) cell envelope Sec protein transport complex (10.6%)" "ATP binding (10.7%) metal ion binding (10.6%) protein-exporting ATPase activity (2.6%)" "IPR004027 (8.3%) IPR011116 (8.1%) IPR036266 (8.1%)" "SEC-C motif (8.3%) SecA Wing/Scaffold (8.1%) SecA, Wing/Scaffold superfamily (8.1%)" EILGNEWLNKDLFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (25%) GO:0016052 (25%)" GO:0005737 (25%) GO:0004139 (25%) "deoxyribonucleotide catabolic process (25%) carbohydrate catabolic process (25%)" cytoplasm (25%) deoxyribose-phosphate aldolase activity (25%) "IPR002915 (33.3%) IPR011343 (33.3%) IPR013785 (33.3%)" "DeoC/FbaB/LacD aldolase (33.3%) Deoxyribose-phosphate aldolase (33.3%) Aldolase-type TIM barrel (33.3%)" SDFVSEVDGKPTALYVLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (16.7%) IPR011013 (16.7%) IPR014718 (16.7%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (16.7%) Galactose mutarotase-like domain superfamily (16.7%) Glycoside hydrolase-type carbohydrate-binding (16.7%)" AGETYNIGGHNEKK root "4.2.1.46 (99.8%) 4.2.1.47 (0.2%)" "dTDP-glucose 4,6-dehydratase (99.8%) GDP-mannose 4,6-dehydratase (0.2%)" "GO:0009225 (42.8%) GO:1901137 (11.7%) GO:0000271 (0.3%)" GO:0005829 (0.1%) "GO:0008460 (43.5%) GO:0016829 (0.2%) GO:0000166 (0.1%)" "nucleotide-sugar metabolic process (42.8%) carbohydrate derivative biosynthetic process (11.7%) polysaccharide biosynthetic process (0.3%)" cytosol (0.1%) "dTDP-glucose 4,6-dehydratase activity (43.5%) lyase activity (0.2%) nucleotide binding (0.1%)" "IPR036291 (33.6%) IPR016040 (33.5%) IPR005888 (32.7%)" "NAD(P)-binding domain superfamily (33.6%) NAD(P)-binding domain (33.5%) dTDP-glucose 4,6-dehydratase (32.7%)" YQFKDPYTGEEEEILIENTETR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (49.2%) "GO:0016149 (49.2%) GO:0003747 (0.8%) GO:0016787 (0.8%)" cytoplasm (49.2%) "translation release factor activity, codon specific (49.2%) translation release factor activity (0.8%) hydrolase activity (0.8%)" "IPR000352 (25.2%) IPR045853 (25.2%) IPR004374 (24.8%)" "Peptide chain release factor class I (25.2%) Peptide chain release factor class I superfamily (25.2%) Peptide chain release factor 2 (24.8%)" DAYTPWMSVFTEAPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" SRDDLQAVMAMVR root "GO:0006974 (0.5%) GO:0042542 (0.5%)" GO:0005829 (48.6%) "GO:0000166 (48.6%) GO:0000049 (0.5%) GO:0005524 (0.5%)" "DNA damage response (0.5%) response to hydrogen peroxide (0.5%)" cytosol (48.6%) "nucleotide binding (48.6%) tRNA binding (0.5%) ATP binding (0.5%)" "IPR007551 (25.5%) IPR035571 (25.5%) IPR036183 (25.5%)" "Nucleotide-binding protein YajQ/Smlt4090-like (25.5%) UPF0234-like, C-terminal (25.5%) YajQ-like superfamily (25.5%)" ALNDNNLEELRQIIVDEEIACPISGTK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.4%) GO:0015966 (12.4%)" "GO:0005737 (12.4%) GO:0070062 (12.4%) GO:1990742 (12.4%)" "GO:0004081 (12.4%) GO:0004820 (12.4%) GO:0005524 (12.4%)" "glycyl-tRNA aminoacylation (12.4%) diadenosine tetraphosphate biosynthetic process (12.4%)" "cytoplasm (12.4%) extracellular exosome (12.4%) microvesicle (12.4%)" "bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.4%) glycine-tRNA ligase activity (12.4%) ATP binding (12.4%)" "IPR002314 (11.1%) IPR002315 (11.1%) IPR004154 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Glycyl-tRNA synthetase (11.1%) Anticodon-binding (11.1%)" TEFLFMDRDALPTEEEQFAAYK root 2.7.3.9 (100%) phosphoenolpyruvate--protein phosphotransferase (100%) "GO:0009401 (19.9%) GO:0015764 (0.1%)" "GO:0005737 (19.8%) GO:0005829 (0%)" "GO:0008965 (20%) GO:0016301 (20%) GO:0046872 (20%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (19.9%) N-acetylglucosamine transport (0.1%)" "cytoplasm (19.8%) cytosol (0%)" "phosphoenolpyruvate-protein phosphotransferase activity (20%) kinase activity (20%) metal ion binding (20%)" "IPR000121 (8.4%) IPR015813 (8.4%) IPR040442 (8.4%)" "PEP-utilising enzyme, C-terminal (8.4%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (8.4%) Pyruvate kinase-like domain superfamily (8.4%)" EFTVNVVKPGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.2 (66.7%) 5.4.2.- (26.7%) 5.4.2.8 (6.7%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (66.7%) Phosphotransferases (phosphomutases) (26.7%) phosphomannomutase (6.7%)" "GO:0005975 (23.8%) GO:0006166 (23.8%)" "GO:0000287 (23.8%) GO:0008973 (23.8%) GO:0004614 (4.4%)" "carbohydrate metabolic process (23.8%) purine ribonucleoside salvage (23.8%)" "magnesium ion binding (23.8%) phosphopentomutase activity (23.8%) phosphoglucomutase activity (4.4%)" "IPR005841 (12.6%) IPR005844 (12.6%) IPR005845 (12.6%)" "Alpha-D-phosphohexomutase superfamily (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.6%)" QLIDLALLQNNMLKGEALTNFVKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (4.8%) "GO:0005524 (23.1%) GO:0016887 (23.1%) GO:0051082 (23.1%)" cytoplasm (4.8%) "ATP binding (23.1%) ATP hydrolysis activity (23.1%) unfolded protein binding (23.1%)" "IPR001404 (19.9%) IPR019805 (19.9%) IPR020568 (19.9%)" "Heat shock protein Hsp90 family (19.9%) Heat shock protein Hsp90, conserved site (19.9%) Ribosomal protein uS5 domain 2-type superfamily (19.9%)" YIDYKDPEFLKK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (25%) "GO:0022627 (25%) GO:0005840 (0.1%)" "GO:0003735 (25%) GO:0070181 (25%)" translation (25%) "cytosolic small ribosomal subunit (25%) ribosome (0.1%)" "structural constituent of ribosome (25%) small ribosomal subunit rRNA binding (25%)" "IPR001648 (33.3%) IPR018275 (33.3%) IPR036870 (33.3%)" "Small ribosomal subunit protein bS18 (33.3%) Small ribosomal subunit protein bS18, conserved site (33.3%) Small ribosomal subunit protein bS18 superfamily (33.3%)" ITLKPGETQTVSFPIDIEALK Bacteria Bacteria 3.2.1.21 (100%) beta-glucosidase (100%) "GO:0009251 (30.4%) GO:0005975 (3.4%) GO:0031222 (0.2%)" "GO:0042597 (29.8%) GO:0030288 (0.2%)" "GO:0008422 (34.3%) GO:0016798 (1.1%) GO:0009044 (0.2%)" "glucan catabolic process (30.4%) carbohydrate metabolic process (3.4%) arabinan catabolic process (0.2%)" "periplasmic space (29.8%) outer membrane-bounded periplasmic space (0.2%)" "beta-glucosidase activity (34.3%) hydrolase activity, acting on glycosyl bonds (1.1%) xylan 1,4-beta-xylosidase activity (0.2%)" "IPR013783 (11.8%) IPR026891 (11.8%) IPR036881 (11.5%)" "Immunoglobulin-like fold (11.8%) Fibronectin type III-like domain (11.8%) Glycoside hydrolase family 3 C-terminal domain superfamily (11.5%)" TIVSGIAQHYKPEELVGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) "GO:0005829 (16.5%) GO:0005737 (0.2%) GO:0016020 (0.2%)" "GO:0000049 (16.7%) GO:0004825 (16.7%) GO:0005524 (16.7%)" methionyl-tRNA aminoacylation (16.7%) "cytosol (16.5%) cytoplasm (0.2%) membrane (0.2%)" "tRNA binding (16.7%) methionine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002547 (8.5%) IPR041872 (8.5%) IPR004495 (8.4%)" "tRNA-binding domain (8.5%) Methionyl-tRNA synthetase, anticodon-binding domain (8.5%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.4%)" HTTQSVFDVTNLNSLPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.1.1 (100%) asparaginase (100%) GO:0006528 (33.3%) "GO:0042597 (31.6%) GO:0030313 (1.8%)" GO:0004067 (33.3%) asparagine metabolic process (33.3%) "periplasmic space (31.6%) cell envelope (1.8%)" asparaginase activity (33.3%) "IPR004550 (11.2%) IPR006034 (11.2%) IPR027473 (11.2%)" "L-asparaginase, type II (11.2%) Asparaginase/glutaminase-like (11.2%) L-asparaginase, C-terminal (11.2%)" LITTEGVEVTPDSNGPTSLFFFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" GTPTQPGTESPYR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.18 (100%) glutamine--tRNA ligase (100%) "GO:0006425 (24.3%) GO:0006424 (2.7%)" GO:0005829 (24.3%) "GO:0004819 (24.3%) GO:0005524 (24.3%)" "glutaminyl-tRNA aminoacylation (24.3%) glutamyl-tRNA aminoacylation (2.7%)" cytosol (24.3%) "glutamine-tRNA ligase activity (24.3%) ATP binding (24.3%)" "IPR004514 (10%) IPR020058 (10%) IPR020059 (10%)" "Glutamine-tRNA synthetase (10%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (10%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain (10%)" IGLPYIQVDPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (24.8%) GO:0006084 (24.8%)" "GO:0003986 (24.8%) GO:0008775 (24.8%) GO:0016740 (0.3%)" "acetate metabolic process (24.8%) acetyl-CoA metabolic process (24.8%)" "acetyl-CoA hydrolase activity (24.8%) acetate CoA-transferase activity (24.8%) transferase activity (0.3%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" SYMAEWNTIGFVPFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR007139 (100%) Protein of unknown function DUF349 (100%) KSELEQIISETKQDEEKLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" SVLQVLHIPDER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.5.1.88 (100%) peptide deformylase (100%) "GO:0043686 (25%) GO:0006412 (24.3%)" GO:0005829 (0.1%) "GO:0042586 (25.2%) GO:0046872 (24.9%) GO:0016787 (0.3%)" "obsolete co-translational protein modification (25%) translation (24.3%)" cytosol (0.1%) "peptide deformylase activity (25.2%) metal ion binding (24.9%) hydrolase activity (0.3%)" "IPR023635 (50.1%) IPR036821 (49.9%)" "Peptide deformylase (50.1%) Peptide deformylase superfamily (49.9%)" VYTSAVPDMDYISGANKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR025272 (100%) Antitoxin SocA-like, Panacea domain (100%) RIPELPIFCDPSHIGGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.5 (100%) chorismate mutase (100%) GO:0046417 (48.3%) "GO:0004106 (48.3%) GO:0003849 (3.4%)" chorismate metabolic process (48.3%) "chorismate mutase activity (48.3%) 3-deoxy-7-phosphoheptulonate synthase activity (3.4%)" "IPR002701 (16.7%) IPR006218 (16.7%) IPR013785 (16.7%)" "Chorismate mutase II, prokaryotic-type (16.7%) DAHP synthetase I/KDSA (16.7%) Aldolase-type TIM barrel (16.7%)" SDEEIANLAATDPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" WAQLAGVSEEER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" ITANKYVAVTYDLNVGEGEERELMEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0042026 (33.3%) GO:0005737 (33.3%) GO:0003755 (33.3%) protein refolding (33.3%) cytoplasm (33.3%) peptidyl-prolyl cis-trans isomerase activity (33.3%) "IPR001179 (43.8%) IPR046357 (43.8%) IPR048261 (12.5%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (43.8%) Peptidyl-prolyl cis-trans isomerase domain superfamily (43.8%) PPIase chaperone SlpA/SlyD-like, insertion domain superfamily (12.5%)" LKDAYPGTTVTLLTMGPGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0009055 (100%) electron transfer activity (100%) "IPR000049 (20%) IPR012255 (20%) IPR014729 (20%)" "Electron transfer flavoprotein, beta-subunit, conserved site (20%) Electron transfer flavoprotein, beta subunit (20%) Rossmann-like alpha/beta/alpha sandwich fold (20%)" AALIDCLAPDRR Bacteria Bacteria "GO:0034220 (22%) GO:0006811 (2.5%) GO:0006974 (0%)" "GO:0009279 (24.7%) GO:0046930 (24.6%) GO:0016020 (0.1%)" "GO:0015288 (24.6%) GO:0016740 (1.2%) GO:0015075 (0%)" "monoatomic ion transmembrane transport (22%) monoatomic ion transport (2.5%) DNA damage response (0%)" "cell outer membrane (24.7%) pore complex (24.6%) membrane (0.1%)" "porin activity (24.6%) transferase activity (1.2%) monoatomic ion transmembrane transporter activity (0%)" "IPR006665 (12.7%) IPR036737 (12.7%) IPR050330 (12.6%)" "OmpA-like domain (12.7%) OmpA-like domain superfamily (12.7%) Bacterial Outer Membrane Structural/Functional (12.6%)" LIHEKGEVVEAYHTAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.14 (100%) biotin carboxylase (100%) GO:2001295 (13.8%) "GO:0005524 (24.1%) GO:0046872 (24.1%) GO:0003989 (13.8%)" malonyl-CoA biosynthetic process (13.8%) "ATP binding (24.1%) metal ion binding (24.1%) acetyl-CoA carboxylase activity (13.8%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" AAGYELGKDITLAMDCAASEFYK root "4.2.1.11 (99.9%) 6.3.4.2 (0.1%)" "phosphopyruvate hydratase (99.9%) CTP synthase (glutamine hydrolyzing) (0.1%)" "GO:0006096 (16.7%) GO:0006396 (0%) GO:0006401 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (15.9%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" "glycolytic process (16.7%) RNA processing (0%) RNA catabolic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (15.9%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020810 (16.8%) IPR036849 (16.8%)" "Enolase (16.8%) Enolase, C-terminal TIM barrel domain (16.8%) Enolase-like, C-terminal domain superfamily (16.8%)" GISLLDAFGAANDVLK root 3.4.24.- (100%) Metalloendopeptidases (100%) "GO:0000917 (14.1%) GO:0043093 (13.8%) GO:0051258 (13.8%)" "GO:0005737 (14.4%) GO:0032153 (14.4%) GO:0005886 (0%)" "GO:0003924 (14.4%) GO:0005525 (14.4%) GO:0016787 (0%)" "division septum assembly (14.1%) FtsZ-dependent cytokinesis (13.8%) protein polymerization (13.8%)" "cytoplasm (14.4%) cell division site (14.4%) plasma membrane (0%)" "GTPase activity (14.4%) GTP binding (14.4%) hydrolase activity (0%)" "IPR045061 (11.3%) IPR036525 (11.2%) IPR003008 (11.2%)" "Tubulin-like protein FtsZ/CetZ (11.3%) Tubulin/FtsZ, GTPase domain superfamily (11.2%) Tubulin/FtsZ, GTPase domain (11.2%)" HLGPDMDVPAGDIGVGGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.4.1.4 (78.9%) 1.4.1.2 (21.1%)" "glutamate dehydrogenase (NADP(+)) (78.9%) glutamate dehydrogenase (21.1%)" GO:0006537 (25.8%) GO:0005829 (25.8%) "GO:0004354 (25.8%) GO:0000166 (21.7%) GO:0004352 (0.6%)" glutamate biosynthetic process (25.8%) cytosol (25.8%) "glutamate dehydrogenase (NADP+) activity (25.8%) nucleotide binding (21.7%) glutamate dehydrogenase (NAD+) activity (0.6%)" "IPR006097 (11.3%) IPR046346 (11.3%) IPR050724 (11.3%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.3%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.3%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.3%)" AGTSAPEFTLVKGDLSNYTLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" IEDTDSNRFVPGAEEYILESFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) GO:0005829 (16.7%) "GO:0004818 (16.7%) GO:0005524 (16.7%) GO:0000049 (16.6%)" glutamyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%) tRNA binding (16.6%)" "IPR000924 (9.7%) IPR014729 (9.7%) IPR020058 (9.7%)" "Glutamyl/glutaminyl-tRNA synthetase (9.7%) Rossmann-like alpha/beta/alpha sandwich fold (9.7%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (9.7%)" ECCHGDLLECADDRADLAK Metazoa Eukaryota Metazoa "GO:0051902 (2.8%) GO:0072732 (2.8%) GO:0009267 (0.5%)" "GO:0072562 (9.5%) GO:0005737 (8%) GO:0005615 (5.8%)" "GO:0046872 (15.6%) GO:0008289 (12.8%) GO:1903981 (10.2%)" "negative regulation of mitochondrial depolarization (2.8%) cellular response to calcium ion starvation (2.8%) cellular response to starvation (0.5%)" "blood microparticle (9.5%) cytoplasm (8%) extracellular space (5.8%)" "metal ion binding (15.6%) lipid binding (12.8%) enterobactin binding (10.2%)" "IPR000264 (21.2%) IPR014760 (21.2%) IPR020858 (21.2%)" "ALB/AFP/VDB (21.2%) Serum albumin, N-terminal (21.2%) Serum albumin-like (21.2%)" MTNETTQSSATSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.-.- (100%) Glycosylases (100%) "GO:0008932 (82.4%) GO:0016798 (17.6%)" "lytic endotransglycosylase activity (82.4%) hydrolase activity, acting on glycosyl bonds (17.6%)" "IPR018392 (33.3%) IPR028082 (33.3%) IPR036779 (33.3%)" "LysM domain (33.3%) Periplasmic binding protein-like I (33.3%) LysM domain superfamily (33.3%)" KANAQAEQPQTNYKKPDDATLR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "1.8.4.11 (50%) 1.8.4.12 (50%)" "peptide-methionine (S)-S-oxide reductase (50%) peptide-methionine (R)-S-oxide reductase (50%)" "GO:0006979 (17.7%) GO:0030091 (17.7%)" GO:0005737 (17.7%) "GO:0008113 (17.7%) GO:0033743 (17.7%) GO:0033744 (11.4%)" "response to oxidative stress (17.7%) protein repair (17.7%)" cytoplasm (17.7%) "peptide-methionine (S)-S-oxide reductase activity (17.7%) peptide-methionine (R)-S-oxide reductase activity (17.7%) L-methionine (S)-S-oxide reductase activity (11.4%)" "IPR002569 (20%) IPR002579 (20%) IPR011057 (20%)" "Peptide methionine sulphoxide reductase MsrA domain (20%) Peptide methionine sulphoxide reductase MrsB domain (20%) Mss4-like superfamily (20%)" DNSSDGGGNTASNYGK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 3.2.1.1 (100%) alpha-amylase (100%) GO:0005975 (27.5%) GO:0016020 (13.7%) "GO:0004556 (27.5%) GO:0043169 (27.5%) GO:0030246 (2%)" carbohydrate metabolic process (27.5%) membrane (13.7%) "alpha-amylase activity (27.5%) cation binding (27.5%) carbohydrate binding (2%)" "IPR006046 (12.8%) IPR006047 (12.8%) IPR013780 (12.8%)" "Alpha amylase (12.8%) Glycosyl hydrolase family 13, catalytic domain (12.8%) Glycosyl hydrolase, all-beta (12.8%)" ISHLTEHLK root GO:0006412 (25.3%) GO:0022627 (25.3%) "GO:0003735 (25.3%) GO:0019843 (24.2%)" translation (25.3%) cytosolic small ribosomal subunit (25.3%) "structural constituent of ribosome (25.3%) rRNA binding (24.2%)" "IPR000589 (33.3%) IPR005290 (33.3%) IPR009068 (33.2%)" "Small ribosomal subunit protein uS15 (33.3%) Small ribosomal subunit protein uS15, bacteria (33.3%) uS15/NS1, RNA-binding domain superfamily (33.2%)" QLNIPVTINACPIVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.2.1 (100%) pantoate--beta-alanine ligase (AMP-forming) (100%) GO:0015940 (25%) GO:0005829 (25%) "GO:0004592 (25%) GO:0005524 (25%)" pantothenate biosynthetic process (25%) cytosol (25%) "pantoate-beta-alanine ligase activity (25%) ATP binding (25%)" "IPR003721 (33.3%) IPR014729 (33.3%) IPR042176 (33.3%)" "Pantoate-beta-alanine ligase (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (33.3%) Pantoate-beta-alanine ligase, C-terminal domain (33.3%)" FDGEVAVEDGALVVNGNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0016620 (12.5%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (12.5%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" INPNALIIGFGRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0030170 (33.3%) GO:0008184 (32.9%) GO:0004645 (0.4%)" carbohydrate metabolic process (33.3%) "pyridoxal phosphate binding (33.3%) glycogen phosphorylase activity (32.9%) 1,4-alpha-oligoglucan phosphorylase activity (0.4%)" "IPR011834 (25.2%) IPR052182 (25.2%) IPR000811 (24.9%)" "Alpha-glucan phosphorylase (25.2%) Glycogen_Maltodextrin_Phosphorylase (25.2%) Glycosyl transferase, family 35 (24.9%)" FSSVWSVGNSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) "GO:0005524 (47.2%) GO:0003824 (18.9%) GO:0043758 (15.1%)" "ATP binding (47.2%) catalytic activity (18.9%) acetate-CoA ligase (ADP-forming) activity (15.1%)" "IPR003781 (18.7%) IPR016102 (18.7%) IPR032875 (18.7%)" "CoA-binding (18.7%) Succinyl-CoA synthetase-like (18.7%) Succinyl-CoA synthetase-like, flavodoxin domain (18.7%)" YIVITGNADSPLAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.13 (100%) arabinose-5-phosphate isomerase (100%) GO:1901135 (39.5%) "GO:0097367 (39.5%) GO:0016853 (16.3%) GO:0019146 (4.7%)" carbohydrate derivative metabolic process (39.5%) "carbohydrate derivative binding (39.5%) isomerase activity (16.3%) arabinose-5-phosphate isomerase activity (4.7%)" "IPR001347 (34%) IPR046348 (34%) IPR035474 (32%)" "SIS domain (34%) SIS domain superfamily (34%) KpsF-like, SIS domain (32%)" FQQTILLPENVEKDKISAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" ATTWYPADRDYFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR004216 (11.2%) IPR005763 (11.2%) IPR015888 (11.2%)" "L-fucose/L-arabinose isomerase, C-terminal (11.2%) L-fucose isomerase (11.2%) L-fucose isomerase, C-terminal (11.2%)" NVGTPFGHIVIAIQSSLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (23.9%) GO:0044208 (23.9%) GO:0006188 (6%)" "GO:0004018 (29.9%) GO:0070626 (16.4%)" "'de novo' IMP biosynthetic process (23.9%) 'de novo' AMP biosynthetic process (23.9%) IMP biosynthetic process (6%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (29.9%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (16.4%)" "IPR000362 (12.5%) IPR004769 (12.5%) IPR008948 (12.5%)" "Fumarate lyase family (12.5%) Adenylosuccinate lyase (12.5%) L-Aspartase-like (12.5%)" RAHSIAAQGGINAAK root "1.3.5.1 (98.5%) 1.3.5.4 (1.4%) 1.3.99.1 (0.1%)" "succinate dehydrogenase (98.5%) Transferred entry: 1.3.5.1 (1.4%) Deleted entry (0.1%)" "GO:0009061 (18.7%) GO:0006108 (0%) GO:0006633 (0%)" "GO:0005886 (18.7%) GO:0005829 (0%) GO:0009317 (0%)" "GO:0009055 (18.7%) GO:0050660 (18.7%) GO:0000104 (14.5%)" "anaerobic respiration (18.7%) malate metabolic process (0%) fatty acid biosynthetic process (0%)" "plasma membrane (18.7%) cytosol (0%) acetyl-CoA carboxylase complex (0%)" "electron transfer activity (18.7%) flavin adenine dinucleotide binding (18.7%) succinate dehydrogenase activity (14.5%)" "IPR003953 (14.4%) IPR030664 (14.4%) IPR036188 (14.4%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.4%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (14.4%) FAD/NAD(P)-binding domain superfamily (14.4%)" GGQEVDKLKEELKK root "GO:0006412 (20.1%) GO:0002181 (0%)" "GO:0022627 (20.1%) GO:0005840 (0.1%) GO:0015934 (0%)" "GO:0003735 (20.1%) GO:0019843 (20.1%) GO:0003729 (19.5%)" "translation (20.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (20.1%) ribosome (0.1%) large ribosomal subunit (0%)" "structural constituent of ribosome (20.1%) rRNA binding (20.1%) mRNA binding (19.5%)" "IPR004044 (11.1%) IPR009019 (11.1%) IPR001351 (11.1%)" "K Homology domain, type 2 (11.1%) K homology domain superfamily, prokaryotic type (11.1%) Small ribosomal subunit protein uS3, C-terminal (11.1%)" TFCAHAPGAVEPLQSAIK root "7.1.1.- (84.5%) 1.6.5.11 (8.3%) 1.6.5.9 (5.6%)" "Hydron translocation or charge separation linked to oxidoreductase reactions (84.5%) Transferred entry: 1.6.5.9 (8.3%) NADH:ubiquinone reductase (non-electrogenic) (5.6%)" "GO:0045333 (0.3%) GO:0009060 (0%) GO:0015980 (0%)" "GO:0005886 (0.4%) GO:0016020 (0.2%) GO:0030964 (0%)" "GO:0051539 (16.9%) GO:0008137 (16.6%) GO:0010181 (16.6%)" "cellular respiration (0.3%) aerobic respiration (0%) energy derivation by oxidation of organic compounds (0%)" "plasma membrane (0.4%) membrane (0.2%) NADH dehydrogenase complex (0%)" "4 iron, 4 sulfur cluster binding (16.9%) NADH dehydrogenase (ubiquinone) activity (16.6%) FMN binding (16.6%)" "IPR019575 (17.1%) IPR037207 (17%) IPR001949 (16.8%)" "NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain (17.1%) NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily (17%) NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site (16.8%)" VFNELQHTITGWPGGKPNADDTYRPER Hymenobacter Bacteria Pseudomonadati Bacteroidota Cytophagia Cytophagales Hymenobacteraceae Hymenobacter 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (31.6%) GO:0006046 (31.6%) GO:0019262 (5.3%)" GO:0004342 (31.6%) "carbohydrate metabolic process (31.6%) N-acetylglucosamine catabolic process (31.6%) N-acetylneuraminate catabolic process (5.3%)" glucosamine-6-phosphate deaminase activity (31.6%) "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" MVAHAQTSEWNMTVYDAHVNLLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" REFYEKPTTER root "GO:0006412 (24.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0005840 (25.1%) GO:1990904 (24.8%) GO:0022627 (0.1%)" "GO:0003735 (24.9%) GO:0016787 (0.2%) GO:0019843 (0%)" "translation (24.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "ribosome (25.1%) ribonucleoprotein complex (24.8%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (24.9%) hydrolase activity (0.2%) rRNA binding (0%)" "IPR001911 (33.6%) IPR038380 (33.6%) IPR018278 (32.8%)" "Small ribosomal subunit protein bS21 (33.6%) Small ribosomal subunit protein bS21 superfamily (33.6%) Small ribosomal subunit protein bS21, conserved site (32.8%)" IAIDLLHQGMIDEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" DNTSGCTAEACSLRDGYQALQAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) "GO:0034599 (25%) GO:0045454 (25%)" GO:0005737 (25%) GO:0008379 (25%) "cellular response to oxidative stress (25%) cell redox homeostasis (25%)" cytoplasm (25%) thioredoxin peroxidase activity (25%) "IPR000866 (20%) IPR013766 (20%) IPR024706 (20%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (20%) Thioredoxin domain (20%) Peroxiredoxin, AhpC-type (20%)" AIYVQHLQQVEE Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001911 (50%) IPR038380 (50%)" "Small ribosomal subunit protein bS21 (50%) Small ribosomal subunit protein bS21 superfamily (50%)" WDASPELPGALEFAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (33.3%) "GO:0008448 (33.3%) GO:0046872 (33.3%)" N-acetylglucosamine catabolic process (33.3%) "N-acetylglucosamine-6-phosphate deacetylase activity (33.3%) metal ion binding (33.3%)" "IPR003764 (25%) IPR006680 (25%) IPR011059 (25%)" "N-acetylglucosamine-6-phosphate deacetylase (25%) Amidohydrolase-related (25%) Metal-dependent hydrolase, composite domain superfamily (25%)" TDVYENMHAAGVVDPAKVTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.5%) GO:0005737 (15.5%) "GO:0005524 (17.5%) GO:0140662 (17.5%) GO:0016853 (16.5%)" protein refolding (17.5%) cytoplasm (15.5%) "ATP binding (17.5%) ATP-dependent protein folding chaperone (17.5%) isomerase activity (16.5%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" GGVGHDLSHIRPK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20%) GO:0009263 (18.2%)" "GO:0004748 (20.6%) GO:0031419 (20.6%) GO:0005524 (18.2%)" "DNA biosynthetic process (20%) deoxyribonucleotide biosynthetic process (18.2%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.6%) cobalamin binding (20.6%) ATP binding (18.2%)" "IPR000788 (25.8%) IPR050862 (25.8%) IPR013344 (25.6%)" "Ribonucleotide reductase large subunit, C-terminal (25.8%) Ribonucleoside diphosphate reductase class-2 (25.8%) Ribonucleotide reductase, adenosylcobalamin-dependent (25.6%)" TDQYGGSVENR root "1.-.-.- (56.5%) 1.3.1.- (41.1%) 2.7.11.1 (1.2%)" "Oxidoreductases (56.5%) With NAD(+) or NADP(+) as acceptor (41.1%) non-specific serine/threonine protein kinase (1.2%)" "GO:0006805 (0%) GO:0018937 (0%) GO:0046256 (0%)" "GO:0005829 (30.5%) GO:0005886 (0.1%) GO:0016020 (0%)" "GO:0010181 (33.9%) GO:0016628 (29.3%) GO:0016491 (3.7%)" "xenobiotic metabolic process (0%) nitroglycerin metabolic process (0%) 2,4,6-trinitrotoluene catabolic process (0%)" "cytosol (30.5%) plasma membrane (0.1%) membrane (0%)" "FMN binding (33.9%) oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (29.3%) oxidoreductase activity (3.7%)" "IPR001155 (32.7%) IPR013785 (32.6%) IPR045247 (31.9%)" "NADH:flavin oxidoreductase/NADH oxidase, N-terminal (32.7%) Aldolase-type TIM barrel (32.6%) Oxidoreductase Oye-like (31.9%)" RVLALDMGALVAGAK root "GO:0034605 (17.1%) GO:0042026 (15.3%) GO:0006508 (0.6%)" "GO:0005829 (14.7%) GO:0005737 (2.4%) GO:0005759 (0%)" "GO:0005524 (17.1%) GO:0016887 (17.1%) GO:0042802 (14.7%)" "cellular response to heat (17.1%) protein refolding (15.3%) proteolysis (0.6%)" "cytosol (14.7%) cytoplasm (2.4%) mitochondrial matrix (0%)" "ATP binding (17.1%) ATP hydrolysis activity (17.1%) identical protein binding (14.7%)" "IPR027417 (8.6%) IPR050130 (8.6%) IPR003959 (8.6%)" "P-loop containing nucleoside triphosphate hydrolase (8.6%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%) ATPase, AAA-type, core (8.6%)" AFAGADTLATSYAIATAIRK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) "GO:0009055 (94.5%) GO:0016491 (3.6%) GO:0003677 (0.9%)" "electron transfer activity (94.5%) oxidoreductase activity (3.6%) DNA binding (0.9%)" "IPR012255 (20.2%) IPR014729 (20.2%) IPR014730 (20.2%)" "Electron transfer flavoprotein, beta subunit (20.2%) Rossmann-like alpha/beta/alpha sandwich fold (20.2%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (20.2%)" EDLKPHAPR root 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8.1%) IPR003029 (8.1%) IPR012162 (8.1%)" "Exoribonuclease, phosphorolytic domain 1 (8.1%) S1 domain (8.1%) Polyribonucleotide nucleotidyltransferase (8.1%)" MREIADKVGAILMIDMAHPAGLIAAGLLDNPVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.4%) GO:0035999 (15.4%) GO:0032259 (11.4%)" GO:0005829 (15.4%) "GO:0004372 (15.4%) GO:0030170 (15.4%) GO:0008168 (11.4%)" "glycine biosynthetic process from serine (15.4%) tetrahydrofolate interconversion (15.4%) methylation (11.4%)" cytosol (15.4%) "glycine hydroxymethyltransferase activity (15.4%) pyridoxal phosphate binding (15.4%) methyltransferase activity (11.4%)" "IPR001085 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Serine hydroxymethyltransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" VVNQIKDDFGSVDILVNNAGITK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) GO:0006633 (33.3%) "GO:0004316 (33.3%) GO:0051287 (33.3%)" fatty acid biosynthetic process (33.3%) "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33.3%) NAD binding (33.3%)" "IPR002347 (16.7%) IPR011284 (16.7%) IPR020904 (16.7%)" "Short-chain dehydrogenase/reductase SDR (16.7%) 3-oxoacyl-(acyl-carrier-protein) reductase (16.7%) Short-chain dehydrogenase/reductase, conserved site (16.7%)" EHNDANVLSMPGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.3.1.6 (100%) ribose-5-phosphate isomerase (100%) "GO:0009052 (33.3%) GO:0019316 (33.3%)" GO:0004751 (33.3%) "pentose-phosphate shunt, non-oxidative branch (33.3%) D-allose catabolic process (33.3%)" ribose-5-phosphate isomerase activity (33.3%) "IPR003500 (33.3%) IPR004785 (33.3%) IPR036569 (33.3%)" "Sugar-phosphate isomerase, RpiB/LacA/LacB family (33.3%) Ribose 5-phosphate isomerase B (33.3%) Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily (33.3%)" GLHSAFTVR root 2.1.1.228 (100%) tRNA (guanine(37)-N(1))-methyltransferase (100%) "GO:0006412 (33%) GO:0002939 (0%) GO:0006364 (0%)" "GO:0022625 (32.9%) GO:0005840 (0.5%) GO:0005829 (0.1%)" "GO:0003735 (33%) GO:0043022 (0%) GO:0052906 (0%)" "translation (33%) tRNA N1-guanine methylation (0%) rRNA processing (0%)" "cytosolic large ribosomal subunit (32.9%) ribosome (0.5%) cytosol (0.1%)" "structural constituent of ribosome (33%) ribosome binding (0%) tRNA (guanine(37)-N1)-methyltransferase activity (0%)" "IPR001857 (25.1%) IPR008991 (25.1%) IPR038657 (25.1%)" "Large ribosomal subunit protein bL19 (25.1%) Translation protein SH3-like domain superfamily (25.1%) Large ribosomal subunit protein bL19 superfamily (25.1%)" AHFGFNMPILYNAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "1.1.1.79 (50.2%) 1.1.1.81 (49.4%) 1.1.1.215 (0.4%)" "glyoxylate reductase (NADP(+)) (50.2%) hydroxypyruvate reductase (49.4%) gluconate 2-dehydrogenase (0.4%)" "GO:0019521 (0.1%) GO:0046181 (0.1%)" "GO:0005829 (18.6%) GO:0005886 (17.2%)" "GO:0030267 (18.6%) GO:0051287 (18.6%) GO:0016618 (10.9%)" "D-gluconate metabolic process (0.1%) ketogluconate catabolic process (0.1%)" "cytosol (18.6%) plasma membrane (17.2%)" "glyoxylate reductase (NADPH) activity (18.6%) NAD binding (18.6%) hydroxypyruvate reductase [NAD(P)H] activity (10.9%)" "IPR036291 (17%) IPR050223 (17%) IPR006140 (16.8%)" "NAD(P)-binding domain superfamily (17%) D-isomer specific 2-hydroxyacid dehydrogenase (17%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (16.8%)" YVLEALQAAPDFEIAGVVRR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (24.8%) GO:0019877 (24.8%)" "GO:0000166 (25.2%) GO:0047850 (24.8%) GO:0016491 (0.3%)" "lysine biosynthetic process via diaminopimelate (24.8%) diaminopimelate biosynthetic process (24.8%)" "nucleotide binding (25.2%) diaminopimelate dehydrogenase activity (24.8%) oxidoreductase activity (0.3%)" "IPR000683 (25.2%) IPR036291 (25.2%) IPR010190 (24.8%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25.2%) NAD(P)-binding domain superfamily (25.2%) Diaminopimelate dehydrogenase, Ddh (24.8%)" EAEAYTNEVQPR root 3.4.24.- (100%) Metalloendopeptidases (100%) "GO:0006508 (30.3%) GO:0051301 (1.4%) GO:0009408 (0.1%)" "GO:0016020 (37.7%) GO:0005829 (0.1%) GO:0098796 (0.1%)" GO:0008233 (30.3%) "proteolysis (30.3%) cell division (1.4%) response to heat (0.1%)" "membrane (37.7%) cytosol (0.1%) membrane protein complex (0.1%)" peptidase activity (30.3%) "IPR010201 (17%) IPR050710 (16.9%) IPR001107 (16.9%)" "HflK (17%) Band 7/mec-2 domain-containing protein (16.9%) Band 7 domain (16.9%)" ALVIIGGDDSNTNACVLAEYYAAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.3%) GO:0006002 (14.2%)" "GO:0005829 (14.3%) GO:0005737 (0.1%)" "GO:0003872 (14.3%) GO:0046872 (14.3%) GO:0047334 (14.2%)" "response to glucose (14.3%) fructose 6-phosphate metabolic process (14.2%)" "cytosol (14.3%) cytoplasm (0.1%)" "6-phosphofructokinase activity (14.3%) metal ion binding (14.3%) diphosphate-fructose-6-phosphate 1-phosphotransferase activity (14.2%)" "IPR000023 (25.2%) IPR022953 (25%) IPR035966 (25%)" "Phosphofructokinase domain (25.2%) ATP-dependent 6-phosphofructokinase (25%) Phosphofructokinase superfamily (25%)" SLLQQTFDRFNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.13 (100%) mannose-1-phosphate guanylyltransferase (100%) GO:0009298 (30.5%) "GO:0004475 (30.5%) GO:0005525 (30.5%) GO:0016853 (5.9%)" GDP-mannose biosynthetic process (30.5%) "mannose-1-phosphate guanylyltransferase (GTP) activity (30.5%) GTP binding (30.5%) isomerase activity (5.9%)" "IPR005835 (25%) IPR029044 (25%) IPR049577 (25%)" "Nucleotidyl transferase domain (25%) Nucleotide-diphospho-sugar transferases (25%) GDP-mannose pyrophosphorylase, N-terminal domain (25%)" RIVNEPTAAALAYGLDK root "3.6.4.10 (99%) 3.6.4.- (0.6%) 1.3.1.74 (0.3%)" "non-chaperonin molecular chaperone ATPase (99%) Acting on ATP; involved in cellular and subcellular movement (0.6%) 2-alkenal reductase [NAD(P)(+)] (0.3%)" "GO:0006986 (1.7%) GO:0006616 (0.9%) GO:0036503 (0.8%)" "GO:0005788 (3.9%) GO:0005737 (1.2%) GO:0097691 (0.9%)" "GO:0005524 (27.2%) GO:0140662 (27.2%) GO:0051082 (21.5%)" "response to unfolded protein (1.7%) SRP-dependent cotranslational protein targeting to membrane, translocation (0.9%) ERAD pathway (0.8%)" "endoplasmic reticulum lumen (3.9%) cytoplasm (1.2%) bacterial extracellular vesicle (0.9%)" "ATP binding (27.2%) ATP-dependent protein folding chaperone (27.2%) unfolded protein binding (21.5%)" "IPR013126 (16.9%) IPR018181 (16.9%) IPR043129 (16.8%)" "Heat shock protein 70 family (16.9%) Heat shock protein 70, conserved site (16.9%) ATPase, nucleotide binding domain (16.8%)" IWLKPDVMAQYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0009636 (20.4%) GO:0005886 (29.6%) "GO:0042910 (29.6%) GO:0015562 (20.4%)" response to toxic substance (20.4%) plasma membrane (29.6%) "xenobiotic transmembrane transporter activity (29.6%) efflux transmembrane transporter activity (20.4%)" "IPR001036 (30.9%) IPR027463 (30.9%) IPR004764 (21.1%)" "Acriflavin resistance protein (30.9%) Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains (30.9%) Multidrug resistance protein MdtF-like (21.1%)" EREFAFLELLEER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.3.1 (100%) citrate (Si)-synthase (100%) "GO:0005975 (24.9%) GO:0006099 (24.9%)" GO:0005829 (24.9%) "GO:0036440 (22.3%) GO:0046912 (2.6%) GO:0016746 (0.4%)" "carbohydrate metabolic process (24.9%) tricarboxylic acid cycle (24.9%)" cytosol (24.9%) "citrate synthase activity (22.3%) acyltransferase activity, acyl groups converted into alkyl on transfer (2.6%) acyltransferase activity (0.4%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" AANAGGVSVSGLEMTQNAQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006537 (25.7%) GO:0005829 (24.3%) "GO:0004354 (25.7%) GO:0000166 (24.3%)" glutamate biosynthetic process (25.7%) cytosol (24.3%) "glutamate dehydrogenase (NADP+) activity (25.7%) nucleotide binding (24.3%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" NNGETAVVIVPDHGNSGISLGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50%) GO:0046872 (50%)" "alkaline phosphatase activity (50%) metal ion binding (50%)" "IPR001952 (50%) IPR017850 (50%)" "Alkaline phosphatase (50%) Alkaline-phosphatase-like, core domain superfamily (50%)" AKPIRENIEFDDFMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004825 (16.7%) GO:0005524 (16.7%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) methionine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR001412 (8.3%) IPR002547 (8.3%) IPR004495 (8.3%)" "Aminoacyl-tRNA synthetase, class I, conserved site (8.3%) tRNA-binding domain (8.3%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.3%)" VFAENFPIADTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.6%) GO:0006508 (0.8%)" GO:0000428 (19.8%) "GO:0003899 (19.7%) GO:0003677 (19.6%) GO:0032549 (19.4%)" "DNA-templated transcription (19.6%) proteolysis (0.8%)" DNA-directed RNA polymerase complex (19.8%) "DNA-directed RNA polymerase activity (19.7%) DNA binding (19.6%) ribonucleoside binding (19.4%)" "IPR007644 (7.9%) IPR007642 (7.9%) IPR015712 (7.9%)" "RNA polymerase, beta subunit, protrusion (7.9%) RNA polymerase Rpb2, domain 2 (7.9%) DNA-directed RNA polymerase, subunit 2 (7.9%)" IGVGAENCADKESGAYTGEVSAAMVASTGAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0019563 (16.6%)" GO:0005829 (16.6%) "GO:0004807 (16.6%) GO:0016853 (0.3%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) glycerol catabolic process (16.6%)" cytosol (16.6%) "triose-phosphate isomerase activity (16.6%) isomerase activity (0.3%)" "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" IDGRPVFVYAYDFTAHGGSLSETNAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.4.1.3 (100%) propionyl-CoA carboxylase (100%) GO:0015977 (20.1%) GO:0009317 (20.1%) "GO:0004658 (29.9%) GO:0003989 (20.1%) GO:0016740 (9.8%)" carbon fixation (20.1%) acetyl-CoA carboxylase complex (20.1%) "propionyl-CoA carboxylase activity (29.9%) acetyl-CoA carboxylase activity (20.1%) transferase activity (9.8%)" "IPR011762 (20.4%) IPR029045 (20.4%) IPR034733 (20.4%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20.4%) ClpP/crotonase-like domain superfamily (20.4%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.4%)" DSFVRLPYTEGIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20%) GO:0005737 (20%) "GO:0003676 (20%) GO:0004816 (20%) GO:0005524 (20%)" asparaginyl-tRNA aminoacylation (20%) cytoplasm (20%) "nucleic acid binding (20%) asparagine-tRNA ligase activity (20%) ATP binding (20%)" "IPR002312 (14.3%) IPR004364 (14.3%) IPR004365 (14.3%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.3%) Aminoacyl-tRNA synthetase, class II (D/K/N) (14.3%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (14.3%)" LVDLPGYGYAEVPEEMKR root "GO:0000917 (24.8%) GO:0051301 (0.1%)" "GO:0005829 (24.9%) GO:0016020 (0%)" "GO:0005525 (24.9%) GO:0046872 (24.9%) GO:0016787 (0.3%)" "division septum assembly (24.8%) cell division (0.1%)" "cytosol (24.9%) membrane (0%)" "GTP binding (24.9%) metal ion binding (24.9%) hydrolase activity (0.3%)" "IPR027417 (25%) IPR019987 (25%) IPR030393 (25%)" "P-loop containing nucleoside triphosphate hydrolase (25%) GTP-binding protein, ribosome biogenesis, YsxC (25%) EngB-type guanine nucleotide-binding (G) domain (25%)" LLKEYKEEIPALK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" SITNQSPVSDEEIER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0034599 (33.3%) GO:0005737 (33.3%) GO:0016491 (33.3%) cellular response to oxidative stress (33.3%) cytoplasm (33.3%) oxidoreductase activity (33.3%) "IPR000415 (33.3%) IPR029479 (33.3%) IPR033877 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase Frm2/Hbn1-like (33.3%)" SVVTGVEMFR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0.1%) GO:0032790 (0%) GO:0070125 (0%)" "GO:0005829 (17.8%) GO:0032045 (5.3%) GO:0005737 (0.4%)" "GO:0003746 (18.3%) GO:0005525 (18.2%) GO:0003924 (17.9%)" "translational elongation (0.1%) ribosome disassembly (0%) mitochondrial translational elongation (0%)" "cytosol (17.8%) guanyl-nucleotide exchange factor complex (5.3%) cytoplasm (0.4%)" "translation elongation factor activity (18.3%) GTP binding (18.2%) GTPase activity (17.9%)" "IPR004161 (8.5%) IPR009000 (8.5%) IPR050055 (8.5%)" "Translation elongation factor EFTu-like, domain 2 (8.5%) Translation protein, beta-barrel domain superfamily (8.5%) Elongation factor Tu GTPase (8.5%)" SIGILTSGGDAPGMNAAIR Bacteria Bacteria 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0016208 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) AMP binding (9.1%)" "IPR000023 (16.7%) IPR012003 (16.7%) IPR012828 (16.7%)" "Phosphofructokinase domain (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic (16.7%)" ISSKEEESIVLTTTECSVLVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" HVGGVAEYR root 1.7.1.7 (100%) GMP reductase (100%) "GO:0006163 (19.7%) GO:0006144 (2.3%) GO:0009117 (0.3%)" "GO:1902560 (20.2%) GO:0005829 (14.7%) GO:0005737 (0.1%)" "GO:0003920 (20.9%) GO:0046872 (20.8%) GO:0016491 (0.5%)" "purine nucleotide metabolic process (19.7%) purine nucleobase metabolic process (2.3%) nucleotide metabolic process (0.3%)" "GMP reductase complex (20.2%) cytosol (14.7%) cytoplasm (0.1%)" "GMP reductase activity (20.9%) metal ion binding (20.8%) oxidoreductase activity (0.5%)" "IPR001093 (20.3%) IPR050139 (20.3%) IPR013785 (20.2%)" "IMP dehydrogenase/GMP reductase (20.3%) Guanosine monophosphate reductase (20.3%) Aldolase-type TIM barrel (20.2%)" TFWSDLRIPGEANELNVELEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (16.8%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (16.8%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" KIEIPEPTADEVK IYSLPEMHGTGIGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0006508 (14.3%) "GO:0016747 (71.4%) GO:0008233 (14.3%)" proteolysis (14.3%) "acyltransferase activity, transferring groups other than amino-acyl groups (71.4%) peptidase activity (14.3%)" "IPR000182 (50%) IPR016181 (50%)" "GNAT domain (50%) Acyl-CoA N-acyltransferase (50%)" SESATNFNNR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" KATPFASQMAAETAAK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001971 (25%) IPR018102 (25%) IPR019981 (25%)" "Small ribosomal subunit protein uS11 (25%) Small ribosomal subunit protein uS11, conserved site (25%) Small ribosomal subunit protein uS11, bacteria (25%)" GADRHEMDPDGGYVVSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.2%) IPR006101 (7.2%) IPR006103 (7.2%)" "Beta galactosidase small chain/ domain 5 (7.2%) Glycoside hydrolase, family 2 (7.2%) Glycoside hydrolase family 2, catalytic domain (7.2%)" AAQTVTCPNCGAPALPHMACPSCGSFR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (33.3%) GO:0015934 (33.3%) GO:0003735 (33.3%) translation (33.3%) large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR002677 (33.3%) IPR011332 (33.3%) IPR044957 (33.3%)" "Large ribosomal subunit protein bL32 (33.3%) Zinc-binding ribosomal protein (33.3%) Large ribosomal subunit protein bL32, bacteria (33.3%)" TELNELLDIINKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.1.12 (100%) prephenate dehydrogenase (100%) GO:0006571 (25%) "GO:0004665 (25%) GO:0008977 (25%) GO:0070403 (25%)" L-tyrosine biosynthetic process (25%) "prephenate dehydrogenase (NADP+) activity (25%) prephenate dehydrogenase (NAD+) activity (25%) NAD+ binding (25%)" "IPR003099 (20%) IPR008927 (20%) IPR036291 (20%)" "Prephenate dehydrogenase (20%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (20%) NAD(P)-binding domain superfamily (20%)" NLDKVDFEELRGLEGIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "1.12.7.2 (60%) 1.12.-.- (20%) 1.12.1.3 (20%)" "ferredoxin hydrogenase (60%) Acting on hydrogen as donors (20%) hydrogen dehydrogenase (NADP(+)) (20%)" "GO:0005506 (24.5%) GO:0008901 (24.5%) GO:0051537 (24.5%)" "iron ion binding (24.5%) ferredoxin hydrogenase activity (24.5%) 2 iron, 2 sulfur cluster binding (24.5%)" "IPR001041 (7.7%) IPR003149 (7.7%) IPR004108 (7.7%)" "2Fe-2S ferredoxin-type iron-sulfur binding domain (7.7%) Iron hydrogenase, small subunit (7.7%) Iron hydrogenase, large subunit, C-terminal (7.7%)" NVHLSGGVGIGGVLEPLQANPTIIEDNCFIGAR root 2.3.1.117 (100%) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (100%) "GO:0019877 (20%) GO:0009089 (19.9%) GO:0009085 (0.2%)" "GO:0005737 (19.7%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0008666 (20%) GO:0016779 (19.9%) GO:0016746 (0.2%)" "diaminopimelate biosynthetic process (20%) lysine biosynthetic process via diaminopimelate (19.9%) lysine biosynthetic process (0.2%)" "cytoplasm (19.7%) cytosol (0%) membrane (0%)" "2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity (20%) nucleotidyltransferase activity (19.9%) acyltransferase activity (0.2%)" "IPR001451 (16.8%) IPR011004 (16.8%) IPR005664 (16.6%)" "Hexapeptide repeat (16.8%) Trimeric LpxA-like superfamily (16.8%) Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family (16.6%)" STGSEYPYVDLYYTKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR027304 (33.3%) IPR046357 (33.3%) IPR052029 (33.3%)" "Trigger factor/SurA domain superfamily (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) Periplasmic chaperone PpiD (33.3%)" LGGIVFTPDEVLNALK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.7.1 (42.9%) 1.2.7.7 (28.6%) 1.2.7.11 (14.3%)" "pyruvate synthase (42.9%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) (28.6%) 2-oxoacid oxidoreductase (ferredoxin) (14.3%)" "GO:0016491 (77.3%) GO:0019164 (13.6%) GO:0043807 (9.1%)" "oxidoreductase activity (77.3%) pyruvate synthase activity (13.6%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity (9.1%)" "IPR002880 (20%) IPR009014 (20%) IPR029061 (20%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%) Thiamin diphosphate-binding fold (20%)" GGYAIPAFNFNNMEQMQAIIK Bacteria Bacteria "4.1.2.13 (98%) 4.1.2.- (2%)" "fructose-bisphosphate aldolase (98%) Aldehyde-lyases (2%)" "GO:0006096 (24.6%) GO:0030388 (24.6%) GO:0005975 (0.4%)" GO:0016020 (0.2%) "GO:0008270 (25%) GO:0004332 (24.8%) GO:0016829 (0.2%)" "glycolytic process (24.6%) fructose 1,6-bisphosphate metabolic process (24.6%) carbohydrate metabolic process (0.4%)" membrane (0.2%) "zinc ion binding (25%) fructose-bisphosphate aldolase activity (24.8%) lyase activity (0.2%)" "IPR000771 (25.1%) IPR013785 (25.1%) IPR050246 (25.1%)" "Fructose-bisphosphate aldolase, class-II (25.1%) Aldolase-type TIM barrel (25.1%) Class II Fructose-bisphosphate Aldolase (25.1%)" AYLMEFAGEESAEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0016149 (50%) cytoplasm (50%) translation release factor activity, codon specific (50%) "IPR000352 (25%) IPR004374 (25%) IPR005139 (25%)" "Peptide chain release factor class I (25%) Peptide chain release factor 2 (25%) Peptide chain release factor (25%)" ITELGIYPAVDPLESTSR root "7.1.2.2 (98.6%) 3.6.3.14 (1.4%)" "H(+)-transporting two-sector ATPase (98.6%) Transferred entry: 7.1.2.2 (1.4%)" "GO:0045259 (22.8%) GO:0005886 (22.1%)" "GO:0005524 (22.8%) GO:0046933 (22.8%) GO:0016787 (8.8%)" "proton-transporting ATP synthase complex (22.8%) plasma membrane (22.1%)" "ATP binding (22.8%) proton-transporting ATP synthase activity, rotational mechanism (22.8%) hydrolase activity (8.8%)" "IPR020003 (10.1%) IPR050053 (10.1%) IPR055190 (10.1%)" "ATPase, alpha/beta subunit, nucleotide-binding domain, active site (10.1%) ATPase alpha/beta chains (10.1%) ATP synthase A/B type, C-terminal domain (10.1%)" GAIDHNIPLITNAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.3.5.5 (78.2%) 6.3.4.16 (21.8%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (78.2%) carbamoyl-phosphate synthase (ammonia) (21.8%)" "GO:0006541 (14.4%) GO:0006221 (11.2%) GO:0006526 (11.2%)" GO:0005737 (14.4%) "GO:0004088 (14.4%) GO:0005524 (14.4%) GO:0046872 (14.2%)" "glutamine metabolic process (14.4%) pyrimidine nucleotide biosynthetic process (11.2%) L-arginine biosynthetic process (11.2%)" cytoplasm (14.4%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14.4%) ATP binding (14.4%) metal ion binding (14.2%)" "IPR011607 (10.2%) IPR036914 (10.2%) IPR005479 (10.1%)" "Methylglyoxal synthase-like domain (10.2%) Methylglyoxal synthase-like domain superfamily (10.2%) Carbamoyl phosphate synthase, ATP-binding domain (10.1%)" EQVEEESTAKEIVDQLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.3%) GO:0006879 (14.3%)" GO:0005829 (14.3%) "GO:0004322 (14.3%) GO:0008198 (14.3%) GO:0008199 (14.3%)" "iron ion transport (14.3%) intracellular iron ion homeostasis (14.3%)" cytosol (14.3%) "ferroxidase activity (14.3%) ferrous iron binding (14.3%) ferric iron binding (14.3%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" EATSDLTGER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.86 (92.1%) 1.1.1.- (7.9%)" "ketol-acid reductoisomerase (NADP(+)) (92.1%) With NAD(+) or NADP(+) as acceptor (7.9%)" "GO:0009097 (21%) GO:0009099 (21%)" GO:0070013 (0.2%) "GO:0004455 (21%) GO:0046872 (20.8%) GO:0016853 (15.9%)" "isoleucine biosynthetic process (21%) L-valine biosynthetic process (21%)" intracellular organelle lumen (0.2%) "ketol-acid reductoisomerase activity (21%) metal ion binding (20.8%) isomerase activity (15.9%)" "IPR000506 (16.7%) IPR013023 (16.7%) IPR013116 (16.7%)" "Ketol-acid reductoisomerase, C-terminal (16.7%) Ketol-acid reductoisomerase (16.7%) Ketol-acid reductoisomerase, N-terminal (16.7%)" IIIAYEPVWAIGTGK root "5.3.1.1 (98.9%) 2.7.2.3 (1.1%)" "triose-phosphate isomerase (98.9%) phosphoglycerate kinase (1.1%)" "GO:0006094 (16.5%) GO:0006096 (16.5%) GO:0019563 (16.3%)" "GO:0005829 (16.5%) GO:0016020 (0.4%)" "GO:0004807 (16.5%) GO:0004618 (0.2%) GO:0005524 (0.2%)" "gluconeogenesis (16.5%) glycolytic process (16.5%) glycerol catabolic process (16.3%)" "cytosol (16.5%) membrane (0.4%)" "triose-phosphate isomerase activity (16.5%) phosphoglycerate kinase activity (0.2%) ATP binding (0.2%)" "IPR000652 (20.3%) IPR020861 (20.3%) IPR013785 (20.2%)" "Triosephosphate isomerase (20.3%) Triosephosphate isomerase, active site (20.3%) Aldolase-type TIM barrel (20.2%)" KYPNPLSEQELFDLFDHFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20.3%) GO:0009263 (18.9%)" "GO:0004748 (20.3%) GO:0031419 (20.3%) GO:0005524 (18.9%)" "DNA biosynthetic process (20.3%) deoxyribonucleotide biosynthetic process (18.9%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.3%) cobalamin binding (20.3%) ATP binding (18.9%)" "IPR000788 (25.4%) IPR013344 (25.4%) IPR050862 (25.4%)" "Ribonucleotide reductase large subunit, C-terminal (25.4%) Ribonucleotide reductase, adenosylcobalamin-dependent (25.4%) Ribonucleoside diphosphate reductase class-2 (25.4%)" LGFVLDHHVYFQPPYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016747 (100%) acyltransferase activity, transferring groups other than amino-acyl groups (100%) "IPR000182 (50%) IPR016181 (50%)" "GNAT domain (50%) Acyl-CoA N-acyltransferase (50%)" VEGVGYSQYNESETPEQNRR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (20%) IPR006665 (20%) IPR036737 (20%)" "Outer membrane protein, bacterial (20%) OmpA-like domain (20%) OmpA-like domain superfamily (20%)" NGIHIIDLHK root GO:0006412 (33.2%) "GO:0022627 (33.2%) GO:0005840 (0.2%)" "GO:0003735 (33.2%) GO:0003723 (0.1%)" translation (33.2%) "cytosolic small ribosomal subunit (33.2%) ribosome (0.2%)" "structural constituent of ribosome (33.2%) RNA binding (0.1%)" "IPR001865 (25.1%) IPR005706 (25.1%) IPR023591 (25.1%)" "Small ribosomal subunit protein uS2 (25.1%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.1%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.1%)" FFADPDQPFNQVMAMVALR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (31.7%) GO:1902600 (31.7%)" "GO:0005524 (31.7%) GO:0016787 (4.9%)" "ATP metabolic process (31.7%) proton transmembrane transport (31.7%)" "ATP binding (31.7%) hydrolase activity (4.9%)" "IPR000194 (20.1%) IPR004100 (20.1%) IPR022879 (20.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (20.1%) V-type ATP synthase regulatory subunit B/beta (20.1%)" NNDTVHDFEKDPIETYIDGEWVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25.6%) IPR002933 (25.6%) IPR011650 (25.6%)" "Peptidase M20C, Xaa-His dipeptidase (25.6%) Peptidase M20 (25.6%) Peptidase M20, dimerisation domain (25.6%)" EGVYDSTLFHR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR002130 (25%) IPR020892 (25%) IPR029000 (25%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (25%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (25%) Cyclophilin-like domain superfamily (25%)" MKSYIAKPADVQR Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae "GO:0006412 (20%) GO:0017148 (20%)" GO:0022625 (20%) "GO:0003729 (20%) GO:0003735 (20%)" "translation (20%) negative regulation of translation (20%)" cytosolic large ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%)" "IPR005822 (33.3%) IPR005823 (33.3%) IPR036899 (33.3%)" "Large ribosomal subunit protein uL13 (33.3%) Large ribosomal subunit protein uL13, bacteria (33.3%) Large ribosomal subunit protein uL13 superfamily (33.3%)" RSYDIAPNALSEDDPRNPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.2.11 (94.4%) 5.4.2.1 (5.6%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (94.4%) Transferred entry: 5.4.2.11 and 5.4.2.12 (5.6%)" "GO:0006094 (33.3%) GO:0006096 (33.3%)" GO:0004619 (33.3%) "gluconeogenesis (33.3%) glycolytic process (33.3%)" phosphoglycerate mutase activity (33.3%) "IPR001345 (25%) IPR005952 (25%) IPR013078 (25%)" "Phosphoglycerate/bisphosphoglycerate mutase, active site (25%) Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%)" QKEFSELEEAYSQAIKEGVQK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) GO:0017004 (25.4%) GO:0030313 (25.4%) "GO:0016209 (23.9%) GO:0016491 (23.9%) GO:0004601 (1.4%)" cytochrome complex assembly (25.4%) cell envelope (25.4%) "antioxidant activity (23.9%) oxidoreductase activity (23.9%) peroxidase activity (1.4%)" "IPR000866 (16.7%) IPR013766 (16.7%) IPR017937 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Thioredoxin, conserved site (16.7%)" DGSADLYQLLAGLAVACR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.3.1.2 (71.8%) 6.3.1.- (28.2%)" "glutamine synthetase (71.8%) Acid--ammonia (or amine) ligases (amide synthases) (28.2%)" "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" "GO:0004356 (20%) GO:0016874 (0.1%)" "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" "glutamine synthetase activity (20%) ligase activity (0.1%)" "IPR008146 (25.1%) IPR014746 (25.1%) IPR008147 (24.9%)" "Glutamine synthetase, catalytic domain (25.1%) Glutamine synthetase/guanido kinase, catalytic domain (25.1%) Glutamine synthetase, N-terminal domain (24.9%)" KAFGGIKDNLVALFINSGTADCESLQGIYGPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) FGGESVLAGSIIVR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (20.6%) GO:1902626 (18.5%) GO:0000027 (0%)" "GO:0022625 (20.7%) GO:0005840 (0.6%) GO:0005737 (0%)" "GO:0003735 (20.7%) GO:0043022 (18.5%) GO:0000049 (0%)" "translation (20.6%) assembly of large subunit precursor of preribosome (18.5%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (20.7%) ribosome (0.6%) cytoplasm (0%)" "structural constituent of ribosome (20.7%) ribosome binding (18.5%) tRNA binding (0%)" "IPR001684 (50.1%) IPR018261 (49.9%)" "Large ribosomal subunit protein bL27 (50.1%) Large ribosomal subunit protein bL27, conserved site (49.9%)" ADFNFGDGLR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium IPR008769 (100%) Poly granule associated (100%) NLGSLGDQVNVK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.9%) GO:0002181 (0%) GO:0032259 (0%)" "GO:0005840 (20.2%) GO:1990904 (19.9%) GO:0022625 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.9%) GO:0008168 (0%)" "translation (19.9%) cytoplasmic translation (0%) methylation (0%)" "ribosome (20.2%) ribonucleoprotein complex (19.9%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%) methyltransferase activity (0%)" "IPR009027 (14.4%) IPR020070 (14.4%) IPR036935 (14.4%)" "Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.4%) Large ribosomal subunit protein bL9, N-terminal (14.4%) Large ribosomal subunit protein bL9, N-terminal domain superfamily (14.4%)" MMTIDKFNFAGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" YMVQPWMPVNDKTTLDDLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016853 (100%) isomerase activity (100%) "IPR006311 (25%) IPR013022 (25%) IPR036237 (25%)" "Twin-arginine translocation pathway, signal sequence (25%) Xylose isomerase-like, TIM barrel domain (25%) Xylose isomerase-like superfamily (25%)" KIGFEGGQMPLQR root GO:0006412 (25.2%) "GO:0022625 (25.2%) GO:0005840 (0%)" "GO:0003735 (25.2%) GO:0019843 (24.3%)" translation (25.2%) "cytosolic large ribosomal subunit (25.2%) ribosome (0%)" "structural constituent of ribosome (25.2%) rRNA binding (24.3%)" "IPR005749 (20.4%) IPR030878 (20.3%) IPR021131 (20.3%)" "Large ribosomal subunit protein uL15, bacteria (20.4%) Large ribosomal subunit protein uL15 (20.3%) Large ribosomal subunit protein uL15/eL18 (20.3%)" SYGNFINLDEFFHGTHK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.16 (100%) cysteine--tRNA ligase (100%) GO:0006423 (20%) GO:0005829 (20%) "GO:0004817 (20%) GO:0005524 (20%) GO:0008270 (20%)" cysteinyl-tRNA aminoacylation (20%) cytosol (20%) "cysteine-tRNA ligase activity (20%) ATP binding (20%) zinc ion binding (20%)" "IPR009080 (14.3%) IPR014729 (14.3%) IPR015273 (14.3%)" "Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (14.3%) Rossmann-like alpha/beta/alpha sandwich fold (14.3%) Cysteinyl-tRNA synthetase, class Ia, DALR (14.3%)" VGLNYVSCSPFRVPIAR root "2.7.9.1 (99.8%) 2.7.-.- (0.2%)" "pyruvate, phosphate dikinase (99.8%) Transferring phosphorus-containing groups (0.2%)" GO:0015979 (0%) GO:0005737 (0.6%) "GO:0050242 (25.9%) GO:0016301 (25%) GO:0046872 (24.3%)" photosynthesis (0%) cytoplasm (0.6%) "pyruvate, phosphate dikinase activity (25.9%) kinase activity (25%) metal ion binding (24.3%)" "IPR000121 (10.4%) IPR010121 (10.4%) IPR015813 (10.3%)" "PEP-utilising enzyme, C-terminal (10.4%) Pyruvate, phosphate dikinase (10.4%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (10.3%)" AVGLYHMVDEAGGDDKVLCVPADVR Bacteria Bacteria 3.6.1.1 (100%) inorganic diphosphatase (100%) GO:0006796 (25%) GO:0005737 (25%) "GO:0000287 (25%) GO:0004427 (25%)" phosphate-containing compound metabolic process (25%) cytoplasm (25%) "magnesium ion binding (25%) inorganic diphosphate phosphatase activity (25%)" "IPR008162 (50%) IPR036649 (50%)" "Inorganic pyrophosphatase (50%) Inorganic pyrophosphatase superfamily (50%)" MQELEDQEMAESK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006413 (0.4%) GO:0005737 (24.9%) "GO:0003743 (24.9%) GO:0003924 (24.9%) GO:0005525 (24.9%)" translational initiation (0.4%) cytoplasm (24.9%) "translation initiation factor activity (24.9%) GTPase activity (24.9%) GTP binding (24.9%)" "IPR000178 (9.1%) IPR000795 (9.1%) IPR005225 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translational (tr)-type GTP-binding domain (9.1%) Small GTP-binding domain (9.1%)" VLEEGANTLSKEETTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006355 (0.9%) GO:0008270 (99.1%) regulation of DNA-templated transcription (0.9%) zinc ion binding (99.1%) "IPR000962 (54.5%) IPR037187 (45.5%)" "Zinc finger, DksA/TraR C4-type (54.5%) DksA, N-terminal domain superfamily (45.5%)" KDVFMGVDELQVGMR root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0042026 (24.9%) GO:0009408 (0%) GO:0050821 (0%)" "GO:0005737 (24.8%) GO:0005829 (0.1%)" "GO:0003755 (24.9%) GO:0046872 (24.8%) GO:0016853 (0.4%)" "protein refolding (24.9%) response to heat (0%) protein stabilization (0%)" "cytoplasm (24.8%) cytosol (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (24.9%) metal ion binding (24.8%) isomerase activity (0.4%)" "IPR046357 (33.4%) IPR048261 (33.4%) IPR001179 (33.2%)" "Peptidyl-prolyl cis-trans isomerase domain superfamily (33.4%) PPIase chaperone SlpA/SlyD-like, insertion domain superfamily (33.4%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (33.2%)" NAAVLAQALIDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (14.9%) GO:0035999 (14.9%) GO:0032259 (12.6%)" GO:0005829 (14.9%) "GO:0004372 (14.9%) GO:0030170 (14.9%) GO:0008168 (12.6%)" "glycine biosynthetic process from serine (14.9%) tetrahydrofolate interconversion (14.9%) methylation (12.6%)" cytosol (14.9%) "glycine hydroxymethyltransferase activity (14.9%) pyridoxal phosphate binding (14.9%) methyltransferase activity (12.6%)" "IPR001085 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Serine hydroxymethyltransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" ANFYLDTPELK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.99.- (100%) With other acceptors (100%) "GO:0050660 (49.3%) GO:0003995 (46.3%) GO:0016491 (1.5%)" "flavin adenine dinucleotide binding (49.3%) acyl-CoA dehydrogenase activity (46.3%) oxidoreductase activity (1.5%)" "IPR009100 (9.3%) IPR013786 (9.3%) IPR037069 (9.3%)" "Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily (9.3%) Acyl-CoA dehydrogenase/oxidase, N-terminal (9.3%) Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily (9.3%)" SQSKEYQNSIIPTGAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25.4%) GO:0005829 (25.4%) "GO:0004802 (25.4%) GO:0046872 (23.7%)" pentose-phosphate shunt (25.4%) cytosol (25.4%) "transketolase activity (25.4%) metal ion binding (23.7%)" "IPR009014 (13%) IPR033247 (13%) IPR055152 (13%)" "Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (13%) Transketolase family (13%) Transketolase-like, C-terminal domain (13%)" LAMENMSTPTALILSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.2.1.1 (95.7%) 2.2.1.- (4.3%)" "transketolase (95.7%) Transketolases and transaldolases (4.3%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" VGGNYAASLVAGEIAHSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (18.2%) GO:0009098 (18.2%) GO:0009099 (18.2%)" GO:0004084 (27.3%) "isoleucine biosynthetic process (18.2%) L-leucine biosynthetic process (18.2%) L-valine biosynthetic process (18.2%)" branched-chain-amino-acid transaminase activity (27.3%) "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" TYDAHRDGFVIAGGGGMVVVEELEHALAR root 2.3.1.41 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase I (100%) "GO:0006633 (33.2%) GO:1903966 (0.1%)" "GO:0005829 (33.2%) GO:0016020 (0.1%)" "GO:0004315 (33.2%) GO:0016746 (0.2%) GO:0022857 (0.1%)" "fatty acid biosynthetic process (33.2%) monounsaturated fatty acid biosynthetic process (0.1%)" "cytosol (33.2%) membrane (0.1%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (33.2%) acyltransferase activity (0.2%) transmembrane transporter activity (0.1%)" "IPR000794 (16.7%) IPR014030 (16.7%) IPR020841 (16.7%)" "Beta-ketoacyl synthase (16.7%) Beta-ketoacyl synthase-like, N-terminal (16.7%) Polyketide synthase, beta-ketoacyl synthase domain (16.7%)" AGEVTAAIAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0006412 (16.8%) GO:0042254 (15.9%)" "GO:0005737 (16.4%) GO:0015935 (16.4%) GO:0005840 (0.4%)" "GO:0003735 (16.8%) GO:0019843 (16.5%) GO:0003723 (0.3%)" "translation (16.8%) ribosome biogenesis (15.9%)" "cytoplasm (16.4%) small ribosomal subunit (16.4%) ribosome (0.4%)" "structural constituent of ribosome (16.8%) rRNA binding (16.5%) RNA binding (0.3%)" "IPR000851 (14.4%) IPR005324 (14.4%) IPR013810 (14.3%)" "Small ribosomal subunit protein uS5 (14.4%) Small ribosomal subunit protein uS5, C-terminal (14.4%) Small ribosomal subunit protein uS5, N-terminal (14.3%)" DSLPEGVYNDQFK root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.5%) GO:0006418 (0.1%) GO:0034605 (0.1%)" "GO:0005829 (14.5%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0000049 (14.5%) GO:0004824 (14.5%) GO:0005524 (14.5%)" "lysyl-tRNA aminoacylation (14.5%) tRNA aminoacylation for protein translation (0.1%) cellular response to heat (0.1%)" "cytosol (14.5%) cytoplasm (0.1%) membrane (0.1%)" "tRNA binding (14.5%) lysine-tRNA ligase activity (14.5%) ATP binding (14.5%)" "IPR004365 (11.6%) IPR012340 (11.6%) IPR044136 (11.5%)" "OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.6%) Nucleic acid-binding, OB-fold (11.6%) Lysine-tRNA ligase, class II, N-terminal (11.5%)" TGCDSLAISIGTSHGAYKFTPEQCHIDPATGR Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (25%) GO:0030388 (25%)" "GO:0004332 (25%) GO:0008270 (25%)" "glycolytic process (25%) fructose 1,6-bisphosphate metabolic process (25%)" "fructose-bisphosphate aldolase activity (25%) zinc ion binding (25%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" TLIGAGSYGWGPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR008969 (14.3%) IPR012910 (14.3%) IPR023996 (14.3%)" "Carboxypeptidase-like, regulatory domain superfamily (14.3%) TonB-dependent receptor, plug domain (14.3%) TonB-dependent outer membrane protein, SusC/RagA (14.3%)" SQNVSNIIQLGGTILK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0046872 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) metal ion binding (9.1%)" "IPR000023 (16.7%) IPR012003 (16.7%) IPR012828 (16.7%)" "Phosphofructokinase domain (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic (16.7%)" NVGKDAMNADGTINR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0009055 (95.8%) GO:0016491 (4.2%)" "electron transfer activity (95.8%) oxidoreductase activity (4.2%)" "IPR000049 (20%) IPR012255 (20%) IPR014729 (20%)" "Electron transfer flavoprotein, beta-subunit, conserved site (20%) Electron transfer flavoprotein, beta subunit (20%) Rossmann-like alpha/beta/alpha sandwich fold (20%)" LGIPTALTNDANAAAVGEMTYGAAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (81.8%) GO:0004340 (18.2%)" "kinase activity (81.8%) glucokinase activity (18.2%)" "IPR000600 (33.3%) IPR043129 (33.3%) IPR049874 (33.3%)" "ROK family (33.3%) ATPase, nucleotide binding domain (33.3%) ROK, conserved site (33.3%)" KAELTAQFGNTPVDTGNPK Collinsella Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella GO:0006412 (25%) GO:0022627 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000589 (33.3%) IPR005290 (33.3%) IPR009068 (33.3%)" "Small ribosomal subunit protein uS15 (33.3%) Small ribosomal subunit protein uS15, bacteria (33.3%) uS15/NS1, RNA-binding domain superfamily (33.3%)" ERILALLDKNSFHEYDMFVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0015977 (23.1%) GO:0009317 (23.1%) "GO:0003989 (23.1%) GO:0004658 (23.1%) GO:0016740 (3.8%)" carbon fixation (23.1%) acetyl-CoA carboxylase complex (23.1%) "acetyl-CoA carboxylase activity (23.1%) propionyl-CoA carboxylase activity (23.1%) transferase activity (3.8%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" AKESAPAAAAPAAQPALAAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.3.1.61 (98.6%) 2.3.1.- (1.4%)" "dihydrolipoyllysine-residue succinyltransferase (98.6%) Transferring groups other than amino-acyl groups (1.4%)" "GO:0006099 (19.4%) GO:0033512 (18.9%) GO:0006554 (0.3%)" "GO:0005829 (19.4%) GO:0045252 (19.2%) GO:0005737 (0.8%)" "GO:0004149 (20%) GO:0031405 (0.8%) GO:0016407 (0.6%)" "tricarboxylic acid cycle (19.4%) L-lysine catabolic process to acetyl-CoA via saccharopine (18.9%) lysine catabolic process (0.3%)" "cytosol (19.4%) oxoglutarate dehydrogenase complex (19.2%) cytoplasm (0.8%)" "dihydrolipoyllysine-residue succinyltransferase activity (20%) lipoic acid binding (0.8%) acetyltransferase activity (0.6%)" "IPR004167 (11.3%) IPR036625 (11.3%) IPR000089 (11.1%)" "Peripheral subunit-binding domain (11.3%) E3-binding domain superfamily (11.3%) Biotin/lipoyl attachment (11.1%)" AVATDGPGTVEILK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.3 (66.7%) 1.2.-.- (33.3%)" "2-oxoglutarate synthase (66.7%) Acting on the aldehyde or oxo group of donors (33.3%)" GO:0044281 (32%) "GO:0030976 (34%) GO:0016625 (30%) GO:0047553 (4%)" small molecule metabolic process (32%) "thiamine pyrophosphate binding (34%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (30%) 2-oxoglutarate synthase activity (4%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" KAAGLDTASGEPNKKK Bacillota Bacteria Bacillati Bacillota GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (15.3%) IPR006519 (15.3%) IPR020783 (15.3%)" "Ribosomal protein uL11 (15.3%) Large ribosomal subunit protein uL11, bacteria (15.3%) Large ribosomal subunit protein uL11, C-terminal (15.3%)" AENQYYGTGRR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (24.8%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (24.8%) GO:0005840 (0.4%) GO:0005737 (0.1%)" "GO:0003735 (24.9%) GO:0003723 (24.7%) GO:0000049 (0.1%)" "translation (24.8%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.8%) ribosome (0.4%) cytoplasm (0.1%)" "structural constituent of ribosome (24.9%) RNA binding (24.7%) tRNA binding (0.1%)" "IPR014721 (20.1%) IPR000754 (20.1%) IPR020568 (20.1%)" "Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (20.1%) Small ribosomal subunit protein uS9 (20.1%) Ribosomal protein uS5 domain 2-type superfamily (20.1%)" TIDISAVSFHK Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.3.1.9 (99.4%) 1.3.1.10 (0.6%)" "enoyl-[acyl-carrier-protein] reductase (NADH) (99.4%) enoyl-[acyl-carrier-protein] reductase (NADPH, Si-specific) (0.6%)" "GO:0006633 (49.7%) GO:0032259 (0.3%)" "GO:0004318 (49.7%) GO:0008168 (0.3%)" "fatty acid biosynthetic process (49.7%) methylation (0.3%)" "enoyl-[acyl-carrier-protein] reductase (NADH) activity (49.7%) methyltransferase activity (0.3%)" "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" FKIEPNEDVHVHDLIR Bacteria Bacteria 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.8%) GO:0005829 (16.8%) "GO:0004818 (16.8%) GO:0005524 (16.8%) GO:0000049 (16.4%)" glutamyl-tRNA aminoacylation (16.8%) cytosol (16.8%) "glutamate-tRNA ligase activity (16.8%) ATP binding (16.8%) tRNA binding (16.4%)" "IPR014729 (10.1%) IPR020058 (10.1%) IPR049940 (10.1%)" "Rossmann-like alpha/beta/alpha sandwich fold (10.1%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (10.1%) Glutamyl-Q tRNA(Asp) synthetase/Glutamate--tRNA ligase (10.1%)" QKAGSIINMASVVGVHGNAGQANYSASK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) GO:0006633 (33%) "GO:0004316 (33%) GO:0051287 (33%) GO:0016491 (1.1%)" fatty acid biosynthetic process (33%) "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33%) NAD binding (33%) oxidoreductase activity (1.1%)" "IPR002347 (16.7%) IPR011284 (16.7%) IPR020904 (16.7%)" "Short-chain dehydrogenase/reductase SDR (16.7%) 3-oxoacyl-(acyl-carrier-protein) reductase (16.7%) Short-chain dehydrogenase/reductase, conserved site (16.7%)" DNWEIVGKPQSQEAYGCMLR root "GO:0006865 (33.2%) GO:0015813 (0.1%) GO:0070778 (0.1%)" "GO:0005576 (33.2%) GO:0030288 (33.1%) GO:0016020 (0.1%)" "GO:0016595 (0.1%) GO:0070335 (0.1%)" "amino acid transport (33.2%) L-glutamate transmembrane transport (0.1%) L-aspartate transmembrane transport (0.1%)" "extracellular region (33.2%) outer membrane-bounded periplasmic space (33.1%) membrane (0.1%)" "glutamate binding (0.1%) aspartate binding (0.1%)" "IPR051455 (50.2%) IPR001638 (49.8%)" "Bacterial solute-binding protein 3 (50.2%) Solute-binding protein family 3/N-terminal domain of MltF (49.8%)" PVSTGCEGLRGNKLIDCLAPDR KMLFHTDTPLLVIDSKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR006015 (33.3%) IPR006016 (33.3%) IPR014729 (33.3%)" "Universal stress protein A family (33.3%) UspA (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (33.3%)" ARVEDALHATR root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.3%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (16.6%) GO:1990220 (0%) GO:0016020 (0%)" "GO:0140662 (17.3%) GO:0005524 (17.3%) GO:0016853 (16.9%)" "protein refolding (17.3%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (16.6%) GroEL-GroES complex (0%) membrane (0%)" "ATP-dependent protein folding chaperone (17.3%) ATP binding (17.3%) isomerase activity (16.9%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR027409 (16.6%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) GroEL-like apical domain superfamily (16.6%)" HVEFPQGATLEQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006004 (25%) GO:0016139 (25%)" GO:0005764 (25%) GO:0004560 (25%) "fucose metabolic process (25%) glycoside catabolic process (25%)" lysosome (25%) alpha-L-fucosidase activity (25%) "IPR000421 (25%) IPR000933 (25%) IPR008979 (25%)" "Coagulation factor 5/8, C-terminal domain (25%) Glycoside hydrolase, family 29 (25%) Galactose-binding-like domain superfamily (25%)" ALQAGTSHFLGQNFGK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.1%) IPR004154 (11.1%) IPR004499 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Anticodon-binding (11.1%) Proline-tRNA ligase, class IIa, archaeal-type (11.1%)" LDKDQLIAGVQDAFADK root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (34.3%) GO:0042026 (0.1%)" "GO:0030313 (26.8%) GO:0042597 (4.1%) GO:0030288 (0.1%)" "GO:0003755 (34.1%) GO:0016853 (0.6%) GO:0044183 (0.1%)" "protein folding (34.3%) protein refolding (0.1%)" "cell envelope (26.8%) periplasmic space (4.1%) outer membrane-bounded periplasmic space (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (34.1%) isomerase activity (0.6%) protein folding chaperone (0.1%)" "IPR000774 (25.2%) IPR036944 (25.2%) IPR046357 (24.8%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25.2%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25.2%) Peptidyl-prolyl cis-trans isomerase domain superfamily (24.8%)" ILIYHFMLFSDEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.8%) GO:0005737 (16.4%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.4%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011263 (16.8%) IPR011260 (16.8%) IPR036603 (16.8%)" "DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) RNA polymerase, alpha subunit, C-terminal (16.8%) RNA polymerase, RBP11-like subunit (16.8%)" IGRNEPCPCGSGKK root 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0017038 (11%) GO:0006605 (11%) GO:0043952 (10.9%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (10.9%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (0.4%)" "protein import (11%) protein targeting (11%) protein transport by the Sec complex (10.9%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (10.9%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (0.4%)" "IPR004027 (11.8%) IPR011116 (7.3%) IPR036266 (7.3%)" "SEC-C motif (11.8%) SecA Wing/Scaffold (7.3%) SecA, Wing/Scaffold superfamily (7.3%)" ISKTEYISCPSCGR Pseudomonadati Bacteria Pseudomonadati "1.17.7.3 (76.1%) 1.17.7.1 (23.9%)" "(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (76.1%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) (23.9%)" "GO:0016114 (17.3%) GO:0019288 (17.3%)" "GO:0046429 (17.3%) GO:0051539 (17.3%) GO:0005506 (17%)" "terpenoid biosynthetic process (17.3%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.3%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.3%) 4 iron, 4 sulfur cluster binding (17.3%) iron ion binding (17%)" "IPR004588 (25.2%) IPR045854 (25.1%) IPR011005 (24.9%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25.2%) Nitrite and sulphite reductase 4Fe-4S domain-like superfamily (25.1%) Dihydropteroate synthase-like superfamily (24.9%)" RLPISNWNAGNLIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" EAMDTHGYGMSSVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (14.7%) GO:0030148 (14.7%)" "GO:0005829 (14.7%) GO:0016020 (14.7%)" "GO:0008890 (14.7%) GO:0030170 (14.7%) GO:0016874 (6.4%)" "L-threonine catabolic process to glycine (14.7%) sphingolipid biosynthetic process (14.7%)" "cytosol (14.7%) membrane (14.7%)" "glycine C-acetyltransferase activity (14.7%) pyridoxal phosphate binding (14.7%) ligase activity (6.4%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" MYVVGETTGDHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.4%) GO:0006164 (0.8%)" GO:0005737 (20.1%) "GO:0004642 (20.1%) GO:0005524 (19.5%) GO:0046872 (19.5%)" "'de novo' IMP biosynthetic process (19.4%) purine nucleotide biosynthetic process (0.8%)" cytoplasm (20.1%) "phosphoribosylformylglycinamidine synthase activity (20.1%) ATP binding (19.5%) metal ion binding (19.5%)" "IPR010918 (11.2%) IPR029062 (11.2%) IPR036676 (11.2%)" "PurM-like, C-terminal domain (11.2%) Class I glutamine amidotransferase-like (11.2%) PurM-like, C-terminal domain superfamily (11.2%)" TLDEMAQDTWHWQSR Bacteria Bacteria "5.1.3.2 (99.8%) 5.1.3.7 (0.2%)" "UDP-glucose 4-epimerase (99.8%) UDP-N-acetylglucosamine 4-epimerase (0.2%)" "GO:0006012 (32.5%) GO:0005996 (0.6%) GO:0005975 (0.1%)" "GO:0005829 (33%) GO:0005737 (0.1%)" "GO:0003978 (33%) GO:0016853 (0.4%) GO:0016829 (0.1%)" "galactose metabolic process (32.5%) monosaccharide metabolic process (0.6%) carbohydrate metabolic process (0.1%)" "cytosol (33%) cytoplasm (0.1%)" "UDP-glucose 4-epimerase activity (33%) isomerase activity (0.4%) lyase activity (0.1%)" "IPR036291 (33.6%) IPR005886 (33%) IPR001509 (26.7%)" "NAD(P)-binding domain superfamily (33.6%) UDP-glucose 4-epimerase (33%) NAD-dependent epimerase/dehydratase (26.7%)" ADDNEETIKKR root "2.7.4.3 (71.4%) 2.7.4.6 (27.9%) 2.7.4.- (0.7%)" "adenylate kinase (71.4%) nucleoside-diphosphate kinase (27.9%) Phosphotransferases with a phosphate group as acceptor (0.7%)" "GO:0046034 (7.3%) GO:0044209 (6.9%) GO:0006172 (6.5%)" "GO:0005737 (15.8%) GO:0016020 (0.3%) GO:0005829 (0.1%)" "GO:0005524 (18.1%) GO:0004017 (15%) GO:0004550 (6.9%)" "ATP metabolic process (7.3%) AMP salvage (6.9%) ADP biosynthetic process (6.5%)" "cytoplasm (15.8%) membrane (0.3%) cytosol (0.1%)" "ATP binding (18.1%) AMP kinase activity (15%) nucleoside diphosphate kinase activity (6.9%)" "IPR000850 (25.6%) IPR033690 (25.3%) IPR027417 (25%)" "Adenylate kinase/UMP-CMP kinase (25.6%) Adenylate kinase, conserved site (25.3%) P-loop containing nucleoside triphosphate hydrolase (25%)" IEVENFPAFILVDNK Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.9%) IPR004647 (16.9%) IPR020557 (16.9%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.9%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.9%) Fumarate lyase, conserved site (16.9%)" SVCISINEVVCHGIPDDAK root 3.4.11.18 (100%) methionyl aminopeptidase (100%) GO:0006508 (19.8%) GO:0005829 (20%) "GO:0070006 (20%) GO:0004239 (19.9%) GO:0005506 (19.3%)" proteolysis (19.8%) cytosol (20%) "metalloaminopeptidase activity (20%) initiator methionyl aminopeptidase activity (19.9%) iron ion binding (19.3%)" "IPR000994 (25.1%) IPR036005 (25.1%) IPR001714 (25%)" "Peptidase M24 (25.1%) Creatinase/aminopeptidase-like (25.1%) Peptidase M24, methionine aminopeptidase (25%)" TENLYILPASQTR root "GO:0051782 (16.6%) GO:0000917 (15.9%) GO:0032506 (0.3%)" "GO:0005829 (16.7%) GO:0009898 (16.7%) GO:0005886 (0.1%)" "GO:0005524 (16.7%) GO:0016887 (16.7%) GO:0016787 (0.1%)" "negative regulation of cell division (16.6%) division septum assembly (15.9%) cytokinetic process (0.3%)" "cytosol (16.7%) cytoplasmic side of plasma membrane (16.7%) plasma membrane (0.1%)" "ATP binding (16.7%) ATP hydrolysis activity (16.7%) hydrolase activity (0.1%)" "IPR050625 (20.3%) IPR027417 (20.3%) IPR010223 (20%)" "ParA/MinD ATPase (20.3%) P-loop containing nucleoside triphosphate hydrolase (20.3%) ATP binding protein MinD (20%)" VELEPTVEPIVEPEPIKEKPKKEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0043093 (33.3%) "GO:0009898 (33.3%) GO:0032153 (33.3%)" FtsZ-dependent cytokinesis (33.3%) "cytoplasmic side of plasma membrane (33.3%) cell division site (33.3%)" "IPR003494 (25%) IPR020823 (25%) IPR043129 (25%)" "SHS2 domain inserted in FtsA (25%) Cell division protein FtsA (25%) ATPase, nucleotide binding domain (25%)" HYVANTDNPTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (45.8%) IPR024302 (45.8%) IPR041662 (8.3%)" "Tetratricopeptide-like helical domain superfamily (45.8%) SusD-like (45.8%) SusD-like 2 (8.3%)" ADFNVPLDGTTITDDGRIK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (25.2%) IPR015824 (25%) IPR036043 (25%)" "Phosphoglycerate kinase (25.2%) Phosphoglycerate kinase, N-terminal (25%) Phosphoglycerate kinase superfamily (25%)" VIFMDIPSAEMTK Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.1.1.22 (96.4%) 1.1.1.- (3.6%)" "UDP-glucose 6-dehydrogenase (96.4%) With NAD(+) or NADP(+) as acceptor (3.6%)" "GO:0000271 (26.1%) GO:0006065 (21.8%)" "GO:0003979 (26.1%) GO:0051287 (26.1%)" "polysaccharide biosynthetic process (26.1%) UDP-glucuronate biosynthetic process (21.8%)" "UDP-glucose 6-dehydrogenase activity (26.1%) NAD binding (26.1%)" "IPR008927 (12.5%) IPR014026 (12.5%) IPR017476 (12.5%)" "6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (12.5%) UDP-glucose/GDP-mannose dehydrogenase, dimerisation (12.5%) UDP-glucose/GDP-mannose dehydrogenase (12.5%)" SNTEIADLFLPIVESHGIQTTHAYVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004818 (16.7%) GO:0005524 (16.7%)" glutamyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR000924 (10%) IPR001412 (10%) IPR004527 (10%)" "Glutamyl/glutaminyl-tRNA synthetase (10%) Aminoacyl-tRNA synthetase, class I, conserved site (10%) Glutamate-tRNA ligase, bacterial/mitochondrial (10%)" TLIPQIIEELKK root 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) "GO:0005737 (19.7%) GO:0005739 (0.3%)" "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) "cytoplasm (19.7%) mitochondrion (0.3%)" "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006158 (16.7%) IPR006159 (16.7%) IPR036724 (16.7%)" "Cobalamin (vitamin B12)-binding domain (16.7%) Methylmalonyl-CoA mutase, C-terminal (16.7%) Cobalamin-binding domain superfamily (16.7%)" SDVQGEFEEHAEEER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006879 (20%) GO:0005829 (20%) "GO:0004322 (20%) GO:0008199 (20%) GO:0020037 (20%)" intracellular iron ion homeostasis (20%) cytosol (20%) "ferroxidase activity (20%) ferric iron binding (20%) heme binding (20%)" "IPR008331 (16.7%) IPR009040 (16.7%) IPR009078 (16.7%)" "Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%) Ferritin-like superfamily (16.7%)" VNVDLYKEYAGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.2%) GO:0005737 (14.2%) "GO:0000049 (14.2%) GO:0002161 (14.2%) GO:0004822 (14.2%)" isoleucyl-tRNA aminoacylation (14.2%) cytoplasm (14.2%) "tRNA binding (14.2%) aminoacyl-tRNA deacylase activity (14.2%) isoleucine-tRNA ligase activity (14.2%)" "IPR002300 (12.5%) IPR002301 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class Ia (12.5%) Isoleucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" VNAALENEEIIKGYIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.8%) "GO:0022627 (24.3%) GO:0005840 (0.9%) GO:1990904 (0.4%)" "GO:0003729 (24.8%) GO:0003735 (24.8%)" translation (24.8%) "cytosolic small ribosomal subunit (24.3%) ribosome (0.9%) ribonucleoprotein complex (0.4%)" "mRNA binding (24.8%) structural constituent of ribosome (24.8%)" "IPR003029 (24.9%) IPR012340 (24.9%) IPR035104 (24.9%)" "S1 domain (24.9%) Nucleic acid-binding, OB-fold (24.9%) Ribosomal protein S1-like (24.9%)" EKLDEIIEVLPGMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.2.17 (100%) ATP phosphoribosyltransferase (100%) GO:0000105 (20%) GO:0005737 (20%) "GO:0000287 (20%) GO:0003879 (20%) GO:0005524 (20%)" L-histidine biosynthetic process (20%) cytoplasm (20%) "magnesium ion binding (20%) ATP phosphoribosyltransferase activity (20%) ATP binding (20%)" "IPR001348 (14.3%) IPR011322 (14.3%) IPR013115 (14.3%)" "ATP phosphoribosyltransferase HisG (14.3%) Nitrogen regulatory PII-like, alpha/beta (14.3%) Histidine biosynthesis HisG, C-terminal (14.3%)" SVYLEGEYGESDLCIGVPVILGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006099 (24.9%) GO:0006089 (24.3%) GO:0019752 (0.6%)" GO:0005737 (0.6%) "GO:0030060 (24.9%) GO:0004459 (24.3%) GO:0016491 (0.6%)" "tricarboxylic acid cycle (24.9%) lactate metabolic process (24.3%) carboxylic acid metabolic process (0.6%)" cytoplasm (0.6%) "L-malate dehydrogenase (NAD+) activity (24.9%) L-lactate dehydrogenase (NAD+) activity (24.3%) oxidoreductase activity (0.6%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR011275 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 3 (16.7%)" VVVIEDLISTGGSSLK root "2.4.2.10 (99.2%) 4.1.1.23 (0.3%) 6.3.4.16 (0.3%)" "orotate phosphoribosyltransferase (99.2%) orotidine-5'-phosphate decarboxylase (0.3%) carbamoyl-phosphate synthase (ammonia) (0.3%)" "GO:0019856 (24.9%) GO:0044205 (24.8%) GO:0006222 (0.2%)" GO:0005951 (0.1%) "GO:0004588 (25%) GO:0000287 (24.3%) GO:0004088 (0.1%)" "pyrimidine nucleobase biosynthetic process (24.9%) 'de novo' UMP biosynthetic process (24.8%) UMP biosynthetic process (0.2%)" carbamoyl-phosphate synthase complex (0.1%) "orotate phosphoribosyltransferase activity (25%) magnesium ion binding (24.3%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (0.1%)" "IPR000836 (24.3%) IPR023031 (24.3%) IPR029057 (24.3%)" "Phosphoribosyltransferase domain (24.3%) Orotate phosphoribosyltransferase (24.3%) Phosphoribosyltransferase-like (24.3%)" KDENGTVTEVYCEYDPNTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (24.7%) GO:0005829 (24.7%) "GO:0004819 (24.7%) GO:0005524 (24.7%) GO:0016874 (1.3%)" glutaminyl-tRNA aminoacylation (24.7%) cytosol (24.7%) "glutamine-tRNA ligase activity (24.7%) ATP binding (24.7%) ligase activity (1.3%)" "IPR000924 (10.1%) IPR004514 (10.1%) IPR011035 (10.1%)" "Glutamyl/glutaminyl-tRNA synthetase (10.1%) Glutamine-tRNA synthetase (10.1%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (10.1%)" VGEDGPTHEPVEQEAQIR Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.2.1.1 (97.5%) 2.2.1.- (2.5%)" "transketolase (97.5%) Transketolases and transaldolases (2.5%)" GO:0006098 (24.9%) "GO:0005829 (24.9%) GO:0016020 (0.4%)" "GO:0004802 (24.9%) GO:0046872 (24.7%) GO:0047896 (0.3%)" pentose-phosphate shunt (24.9%) "cytosol (24.9%) membrane (0.4%)" "transketolase activity (24.9%) metal ion binding (24.7%) formaldehyde transketolase activity (0.3%)" "IPR005475 (12.8%) IPR020826 (12.8%) IPR033247 (12.8%)" "Transketolase-like, pyrimidine-binding domain (12.8%) Transketolase binding site (12.8%) Transketolase family (12.8%)" HMNSSEMIEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.- (100%) Hydro-lyases (100%) "GO:0004089 (50%) GO:0008270 (50%)" "carbonate dehydratase activity (50%) zinc ion binding (50%)" "IPR001765 (50%) IPR036874 (50%)" "Carbonic anhydrase (50%) Carbonic anhydrase superfamily (50%)" CGAWHIYHTVCGECGYYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0015934 (33.3%) GO:0003735 (33.3%) translation (33.3%) large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR002677 (33.3%) IPR011332 (33.3%) IPR044957 (33.3%)" "Large ribosomal subunit protein bL32 (33.3%) Zinc-binding ribosomal protein (33.3%) Large ribosomal subunit protein bL32, bacteria (33.3%)" DVYDAIQDLQEDAKDLAHHAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR024623 (100%) Uncharacterised protein family YtxH (100%) EGLPEEEIIAYSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR006015 (33.9%) IPR006016 (33.9%) IPR014729 (30.5%)" "Universal stress protein A family (33.9%) UspA (33.9%) Rossmann-like alpha/beta/alpha sandwich fold (30.5%)" LAADAWVMVDKETLVHKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.8.2.3 (100%) sulfide-cytochrome-c reductase (flavocytochrome c) (100%) GO:0070221 (29.2%) "GO:0070224 (29.2%) GO:0071949 (29.2%) GO:0070225 (12.5%)" sulfide oxidation, using sulfide:quinone oxidoreductase (29.2%) "sulfide:quinone oxidoreductase activity (29.2%) FAD binding (29.2%) sulfide dehydrogenase activity (12.5%)" "IPR006311 (25%) IPR015904 (25%) IPR023753 (25%)" "Twin-arginine translocation pathway, signal sequence (25%) Sulphide quinone-reductase (25%) FAD/NAD(P)-binding domain (25%)" SNFLEAGPFNEMVVMGVLAVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (94.7%) GO:0050112 (5.3%)" "nucleotide binding (94.7%) inositol 2-dehydrogenase (NAD+) activity (5.3%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" AITSSAGNQTPEK root "3.2.-.- (98.1%) 3.2.2.3 (1.6%) 3.2.2.1 (0.3%)" "Glycosylases (98.1%) uridine nucleosidase (1.6%) purine nucleosidase (0.3%)" "GO:0006152 (16.9%) GO:0006206 (15.9%) GO:0015949 (15.9%)" "GO:0005829 (16.9%) GO:0016020 (0%) GO:0032991 (0%)" "GO:0008477 (16.9%) GO:0045437 (16.9%) GO:0016787 (0.1%)" "purine nucleoside catabolic process (16.9%) pyrimidine nucleobase metabolic process (15.9%) nucleobase-containing small molecule interconversion (15.9%)" "cytosol (16.9%) membrane (0%) protein-containing complex (0%)" "purine nucleosidase activity (16.9%) uridine nucleosidase activity (16.9%) hydrolase activity (0.1%)" "IPR001910 (20.2%) IPR023186 (20.2%) IPR036452 (20.2%)" "Inosine/uridine-preferring nucleoside hydrolase domain (20.2%) Inosine/uridine-preferring nucleoside hydrolase (20.2%) Ribonucleoside hydrolase-like (20.2%)" YRLEKEDPIDILEVDNTAVRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (16.7%) IPR006099 (16.7%) IPR006158 (16.7%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-binding domain (16.7%)" DVATLKDPVDYATLCK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.4.1.21 (100%) starch synthase (100%) "GO:0016757 (93.8%) GO:0009011 (6.3%)" "glycosyltransferase activity (93.8%) alpha-1,4-glucan glucosyltransferase (ADP-glucose donor) activity (6.3%)" IPR013534 (100%) Starch synthase, catalytic domain (100%) MKATNAVIGGEGNGGVIYPASHYGR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "5.4.2.10 (79.3%) 5.4.2.2 (17.2%) 5.4.2.8 (3.4%)" "phosphoglucosamine mutase (79.3%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (17.2%) phosphomannomutase (3.4%)" "GO:0005975 (13.9%) GO:0006048 (13.9%) GO:0009252 (13.9%)" GO:0005829 (13.9%) "GO:0000287 (13.9%) GO:0004615 (13.9%) GO:0008966 (13.9%)" "carbohydrate metabolic process (13.9%) UDP-N-acetylglucosamine biosynthetic process (13.9%) peptidoglycan biosynthetic process (13.9%)" cytosol (13.9%) "magnesium ion binding (13.9%) phosphomannomutase activity (13.9%) phosphoglucosamine mutase activity (13.9%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" GTEYEAFGGNKPFHTTLLPFTR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.2.1.22 (100%) alpha-galactosidase (100%) "GO:0030246 (64.8%) GO:0016787 (33.3%) GO:0004557 (1.9%)" "carbohydrate binding (64.8%) hydrolase activity (33.3%) alpha-galactosidase activity (1.9%)" "IPR013785 (14%) IPR014718 (14%) IPR017853 (14%)" "Aldolase-type TIM barrel (14%) Glycoside hydrolase-type carbohydrate-binding (14%) Glycoside hydrolase superfamily (14%)" KLAVSQEELAEIAAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009117 (50%) GO:0003824 (50%) nucleotide metabolic process (50%) catalytic activity (50%) "IPR001310 (33.3%) IPR011146 (33.3%) IPR036265 (33.3%)" "Histidine triad (HIT) protein (33.3%) HIT-like domain (33.3%) HIT-like superfamily (33.3%)" QQNDDNEIIVSASR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0044718 (25.1%) GO:0009279 (25.1%) "GO:0015344 (25.1%) GO:0038023 (24.2%) GO:0047091 (0.4%)" siderophore transmembrane transport (25.1%) cell outer membrane (25.1%) "siderophore uptake transmembrane transporter activity (25.1%) signaling receptor activity (24.2%) L-lysine 6-monooxygenase (NADPH) activity (0.4%)" "IPR012910 (14.6%) IPR037066 (14.6%) IPR039426 (14.6%)" "TonB-dependent receptor, plug domain (14.6%) TonB-dependent receptor, plug domain superfamily (14.6%) TonB-dependent receptor-like (14.6%)" EGEATLAPSLDLVGK root "1.11.1.26 (97.7%) 1.11.1.15 (1.3%) 1.11.1.24 (0.8%)" "NADH-dependent peroxiredoxin (97.7%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (1.3%) thioredoxin-dependent peroxiredoxin (0.8%)" "GO:0006979 (14.7%) GO:0042744 (14.7%) GO:0045454 (14.7%)" "GO:0005829 (14.7%) GO:0016020 (0%) GO:0005737 (0%)" "GO:0008379 (14.7%) GO:0102039 (11.5%) GO:0051920 (0.1%)" "response to oxidative stress (14.7%) hydrogen peroxide catabolic process (14.7%) cell redox homeostasis (14.7%)" "cytosol (14.7%) membrane (0%) cytoplasm (0%)" "thioredoxin peroxidase activity (14.7%) NADH-dependent peroxiredoxin activity (11.5%) peroxiredoxin activity (0.1%)" "IPR019479 (14.4%) IPR036249 (14.4%) IPR050217 (14.3%)" "Peroxiredoxin, C-terminal (14.4%) Thioredoxin-like superfamily (14.4%) Thiol-specific antioxidant peroxiredoxin (14.3%)" GQLSELGAVNVMTGVYTGR FAVLKEQGLTPVLCIGETEAENEAGKTEEVCAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0019563 (16.6%)" "GO:0005829 (16.6%) GO:0016020 (0%)" "GO:0004807 (16.6%) GO:0016853 (0.3%) GO:0042802 (0%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) glycerol catabolic process (16.6%)" "cytosol (16.6%) membrane (0%)" "triose-phosphate isomerase activity (16.6%) isomerase activity (0.3%) identical protein binding (0%)" "IPR000652 (20.1%) IPR013785 (20.1%) IPR035990 (20.1%)" "Triosephosphate isomerase (20.1%) Aldolase-type TIM barrel (20.1%) Triosephosphate isomerase superfamily (20.1%)" SIITLLGEDAEREGLLKTPER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.4.16 (100%) GTP cyclohydrolase I (100%) "GO:0006729 (14.2%) GO:0006730 (14.2%) GO:0046654 (14.2%)" GO:0005737 (14.2%) "GO:0003934 (14.2%) GO:0005525 (14.2%) GO:0008270 (14.2%)" "tetrahydrobiopterin biosynthetic process (14.2%) one-carbon metabolic process (14.2%) tetrahydrofolate biosynthetic process (14.2%)" cytoplasm (14.2%) "GTP cyclohydrolase I activity (14.2%) GTP binding (14.2%) zinc ion binding (14.2%)" "IPR001474 (20%) IPR018234 (20%) IPR020602 (20%)" "GTP cyclohydrolase I (20%) GTP cyclohydrolase I, conserved site (20%) GTP cyclohydrolase I domain (20%)" GTQESDLPYSFSKDEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0006516 (20%) GO:0005975 (18.7%)" GO:0005829 (20%) "GO:0000224 (20%) GO:0030246 (16%) GO:0016798 (5.3%)" "glycoprotein catabolic process (20%) carbohydrate metabolic process (18.7%)" cytosol (20%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (20%) carbohydrate binding (16%) hydrolase activity, acting on glycosyl bonds (5.3%)" "IPR012939 (18.1%) IPR050883 (18.1%) IPR005887 (16.9%)" "Glycosyl hydrolase family 92 (18.1%) Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (18.1%) Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.9%)" RSTIFPSFVGHTIAVHDGR Clostridia Bacteria Bacillati Bacillota Clostridia "GO:0006412 (16.7%) GO:0000028 (16.5%)" "GO:0005737 (16.5%) GO:0015935 (16.5%) GO:0005840 (0.2%)" "GO:0003735 (16.7%) GO:0019843 (16.5%)" "translation (16.7%) ribosomal small subunit assembly (16.5%)" "cytoplasm (16.5%) small ribosomal subunit (16.5%) ribosome (0.2%)" "structural constituent of ribosome (16.7%) rRNA binding (16.5%)" "IPR002222 (25.2%) IPR023575 (25.2%) IPR005732 (24.8%)" "Small ribosomal subunit protein uS19 (25.2%) Small ribosomal subunit protein uS19, superfamily (25.2%) Small ribosomal subunit protein uS19, bacteria (24.8%)" ENIVTTNQSTDMEAASR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" LLFALQDNIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR021857 (100%) Protein of unknown function DUF3467 (100%) SEIDSLPTELDIVR Clostridia Bacteria Bacillati Bacillota Clostridia "GO:0034605 (20%) GO:0042026 (20%)" GO:0005737 (20%) "GO:0005524 (20%) GO:0016887 (20%)" "cellular response to heat (20%) protein refolding (20%)" cytoplasm (20%) "ATP binding (20%) ATP hydrolysis activity (20%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" IIGDEVTLQVFSGTEGIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (32.9%) GO:1902600 (32.9%)" "GO:0005524 (32.9%) GO:0016787 (1.4%)" "ATP metabolic process (32.9%) proton transmembrane transport (32.9%)" "ATP binding (32.9%) hydrolase activity (1.4%)" "IPR000194 (20.2%) IPR004100 (20.2%) IPR022879 (20.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (20.2%) V-type ATP synthase regulatory subunit B/beta (20.2%)" SIGATTLDEYQK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0034605 (19.4%) GO:0042026 (18.5%) GO:0006508 (2%)" GO:0005737 (19.4%) "GO:0005524 (19.4%) GO:0016887 (19.4%) GO:0008233 (2%)" "cellular response to heat (19.4%) protein refolding (18.5%) proteolysis (2%)" cytoplasm (19.4%) "ATP binding (19.4%) ATP hydrolysis activity (19.4%) peptidase activity (2%)" "IPR018368 (8.4%) IPR027417 (8.4%) IPR050130 (8.4%)" "ClpA/B, conserved site 1 (8.4%) P-loop containing nucleoside triphosphate hydrolase (8.4%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.4%)" EAEAYPGPSLVIAYAPCINHGLK Bacteria Bacteria "1.2.7.1 (78.6%) 1.2.1.51 (10.7%) 1.2.7.- (10.7%)" "pyruvate synthase (78.6%) pyruvate dehydrogenase (NADP(+)) (10.7%) With an iron-sulfur protein as acceptor (10.7%)" "GO:0006979 (15.5%) GO:0022900 (15.1%) GO:0044281 (9.7%)" "GO:0005506 (15.1%) GO:0051539 (15.1%) GO:0030976 (13.5%)" "response to oxidative stress (15.5%) electron transport chain (15.1%) small molecule metabolic process (9.7%)" "iron ion binding (15.1%) 4 iron, 4 sulfur cluster binding (15.1%) thiamine pyrophosphate binding (13.5%)" "IPR029061 (8%) IPR050722 (8%) IPR002869 (7.8%)" "Thiamin diphosphate-binding fold (8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (8%) Pyruvate-flavodoxin oxidoreductase, central domain (7.8%)" MGAEVFHALKEVLK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (17%) IPR020809 (17%) IPR020810 (17%)" "Enolase (17%) Enolase, conserved site (17%) Enolase, C-terminal TIM barrel domain (17%)" TIWVDDNYFNAR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (17%) IPR001867 (17%) IPR011006 (17%)" "Signal transduction response regulator, receiver domain (17%) OmpR/PhoB-type DNA-binding domain (17%) CheY-like superfamily (17%)" TNDPMPLFVKPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.-.- (95%) 3.4.13.- (5%)" "Acting on peptide bonds (peptidases) (95%) Dipeptidases (5%)" GO:0006508 (32.7%) "GO:0016805 (34.5%) GO:0070004 (32.7%)" proteolysis (32.7%) "dipeptidase activity (34.5%) cysteine-type exopeptidase activity (32.7%)" IPR005322 (100%) Peptidase C69 (100%) LLDVIGDLALIGKPIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.5.1.108 (51%) 4.2.1.59 (48.5%) 4.2.1.- (0.5%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase (51%) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (48.5%) Hydro-lyases (0.5%)" "GO:0009245 (14.5%) GO:0006633 (14.1%)" "GO:0016020 (14.5%) GO:0005737 (14.1%)" "GO:0103117 (14.5%) GO:0046872 (14.1%) GO:0019171 (12.9%)" "lipid A biosynthetic process (14.5%) fatty acid biosynthetic process (14.1%)" "membrane (14.5%) cytoplasm (14.1%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.5%) metal ion binding (14.1%) (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (12.9%)" "IPR004463 (14.5%) IPR011334 (14.5%) IPR020568 (14.5%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.5%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.5%) Ribosomal protein uS5 domain 2-type superfamily (14.5%)" AMLQDIATLTGGTVISEEIGMELEKATLEDLGQAK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (16.9%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (16.8%) GO:1990220 (0.1%) GO:0005829 (0%)" "GO:0140662 (16.9%) GO:0005524 (16.9%) GO:0016853 (16.8%)" "protein refolding (16.9%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (16.8%) GroEL-GroES complex (0.1%) cytosol (0%)" "ATP-dependent protein folding chaperone (16.9%) ATP binding (16.9%) isomerase activity (16.8%)" "IPR001844 (16.8%) IPR027409 (16.8%) IPR002423 (16.8%)" "Chaperonin Cpn60/GroEL (16.8%) GroEL-like apical domain superfamily (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%)" KLDMVPVECVVR Bacteria Bacteria 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) "GO:0006189 (20.1%) GO:0009236 (18.5%) GO:0006164 (0.2%)" "GO:0005829 (19.9%) GO:0016020 (0.1%)" "GO:0004639 (20.3%) GO:0005524 (20.3%) GO:0016874 (0.5%)" "'de novo' IMP biosynthetic process (20.1%) cobalamin biosynthetic process (18.5%) purine nucleotide biosynthetic process (0.2%)" "cytosol (19.9%) membrane (0.1%)" "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (20.3%) ATP binding (20.3%) ligase activity (0.5%)" "IPR018236 (20.8%) IPR028923 (20.8%) IPR050089 (20.3%)" "SAICAR synthetase, conserved site (20.8%) SAICAR synthetase/ADE2, N-terminal (20.8%) SAICAR synthetase (20.3%)" VAIKGPLTTPVGGGIR root "1.1.1.42 (99.9%) 1.1.1.- (0.1%) 1.1.1.41 (0.1%)" "isocitrate dehydrogenase (NADP(+)) (99.9%) With NAD(+) or NADP(+) as acceptor (0.1%) isocitrate dehydrogenase (NAD(+)) (0.1%)" "GO:0006099 (21%) GO:0006097 (18.5%) GO:0006979 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004450 (21%) GO:0000287 (18.4%) GO:0051287 (18.4%)" "tricarboxylic acid cycle (21%) glyoxylate cycle (18.5%) response to oxidative stress (0%)" "cytoplasm (0%) cytosol (0%)" "isocitrate dehydrogenase (NADP+) activity (21%) magnesium ion binding (18.4%) NAD binding (18.4%)" "IPR004439 (34.7%) IPR024084 (34.7%) IPR019818 (30.6%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (34.7%) Isopropylmalate dehydrogenase-like domain (34.7%) Isocitrate/isopropylmalate dehydrogenase, conserved site (30.6%)" MENEELIKQVTEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.- (50%) 5.4.2.2 (50%)" "Phosphotransferases (phosphomutases) (50%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (50%)" "GO:0005975 (24%) GO:0006166 (24%)" "GO:0000287 (24%) GO:0008973 (24%) GO:0004614 (4%)" "carbohydrate metabolic process (24%) purine ribonucleoside salvage (24%)" "magnesium ion binding (24%) phosphopentomutase activity (24%) phosphoglucomutase activity (4%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" AIESLDGLKGENDDETTGIAIIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" KMDLYTQYAIAAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" IIVEKPFGTSLESAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.49 (100%) glucose-6-phosphate dehydrogenase (NADP(+)) (100%) "GO:0006006 (20%) GO:0009051 (20%)" GO:0005829 (20%) "GO:0004345 (20%) GO:0050661 (20%)" "glucose metabolic process (20%) pentose-phosphate shunt, oxidative branch (20%)" cytosol (20%) "glucose-6-phosphate dehydrogenase activity (20%) NADP binding (20%)" "IPR001282 (20%) IPR019796 (20%) IPR022674 (20%)" "Glucose-6-phosphate dehydrogenase (20%) Glucose-6-phosphate dehydrogenase, active site (20%) Glucose-6-phosphate dehydrogenase, NAD-binding (20%)" MVIGIPSGSTEVEIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0000902 (25%) GO:0008360 (25%)" GO:0005737 (25%) GO:0005524 (25%) "cell morphogenesis (25%) regulation of cell shape (25%)" cytoplasm (25%) ATP binding (25%) "IPR004753 (33.3%) IPR043129 (33.3%) IPR056546 (33.3%)" "Cell shape determining protein MreB (33.3%) ATPase, nucleotide binding domain (33.3%) MreB/MamK-like (33.3%)" LLPEHDVAYDGNPLAQQHGPR root "5.4.99.- (88.7%) 5.4.99.19 (6.2%) 5.4.99.21 (4.1%)" "Transferring other groups (88.7%) 16S rRNA pseudouridine(516) synthase (6.2%) 23S rRNA pseudouridine(2604) synthase (4.1%)" "GO:0000455 (22.6%) GO:0006364 (0.5%) GO:0001522 (0.3%)" GO:0005829 (21.3%) "GO:0003723 (24.1%) GO:0160136 (12.1%) GO:0120159 (11%)" "enzyme-directed rRNA pseudouridine synthesis (22.6%) rRNA processing (0.5%) pseudouridine synthesis (0.3%)" cytosol (21.3%) "RNA binding (24.1%) 16S rRNA pseudouridine(516) synthase activity (12.1%) rRNA pseudouridine synthase activity (11%)" "IPR050343 (11.5%) IPR002942 (11.4%) IPR036986 (11.4%)" "Ribosomal RNA Pseudouridine Synthase RsuA (11.5%) RNA-binding S4 domain (11.4%) RNA-binding S4 domain superfamily (11.4%)" EVSWMPSYGPEQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.3 (62.5%) 1.2.7.1 (37.5%)" "2-oxoglutarate synthase (62.5%) pyruvate synthase (37.5%)" "GO:0016903 (68.6%) GO:0016625 (17.6%) GO:0047553 (7.8%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (68.6%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (17.6%) 2-oxoglutarate synthase activity (7.8%)" "IPR002869 (31.5%) IPR019752 (31.5%) IPR052554 (31.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (31.5%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (31.5%) 2-oxoglutarate synthase subunit KorC (31.5%)" VEQNKTNLDYLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" TFTTQETMTNAHSAR root 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" "GO:0005829 (14.3%) GO:0016020 (0%) GO:0005737 (0%)" "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.2%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" "cytosol (14.3%) membrane (0%) cytoplasm (0%)" "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.2%)" "IPR001672 (17.7%) IPR046348 (17.7%) IPR035476 (17.7%)" "Phosphoglucose isomerase (PGI) (17.7%) SIS domain superfamily (17.7%) Phosphoglucose isomerase, SIS domain 1 (17.7%)" NAMGVGIPGTGMIGLPIAIALGALIGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.1.17 (100%) L-serine ammonia-lyase (100%) GO:0019450 (48.7%) GO:0016020 (2.5%) GO:0080146 (48.7%) L-cysteine catabolic process to pyruvate (48.7%) membrane (2.5%) L-cysteine desulfhydrase activity (48.7%) "IPR021144 (50.3%) IPR005130 (49.7%)" "Uncharacterised protein family UPF0597 (50.3%) Serine dehydratase-like, alpha subunit (49.7%)" MDDKPGELIPAELR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" AFATNFNPEINIR root "1.5.1.7 (61.1%) 1.5.1.43 (23.3%) 1.1.1.- (6.1%)" "saccharopine dehydrogenase (NAD(+), L-lysine-forming) (61.1%) carboxynorspermidine synthase (23.3%) With NAD(+) or NADP(+) as acceptor (6.1%)" GO:0008295 (0.6%) GO:0016020 (1.2%) "GO:0004754 (50.6%) GO:0016491 (25.3%) GO:0102143 (20.6%)" spermidine biosynthetic process (0.6%) membrane (1.2%) "saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (50.6%) oxidoreductase activity (25.3%) carboxynorspermidine dehydrogenase activity (20.6%)" "IPR032095 (33.5%) IPR005097 (33.3%) IPR036291 (33.1%)" "Saccharopine dehydrogenase-like, C-terminal (33.5%) Saccharopine dehydrogenase, NADP binding domain (33.3%) NAD(P)-binding domain superfamily (33.1%)" YKDGLPGPVEGEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (27%) GO:0003863 (6.3%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (27%) branched-chain 2-oxo acid dehydrogenase activity (6.3%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" HLAVAVTPVAGQLDLKK root 4.2.-.- (100%) Carbon-oxygen lyases (100%) "GO:0006412 (24.2%) GO:0006879 (0.1%) GO:0010165 (0.1%)" "GO:0005737 (22.4%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0002161 (25.3%) GO:0016829 (24.2%) GO:0004812 (1.7%)" "translation (24.2%) intracellular iron ion homeostasis (0.1%) response to X-ray (0.1%)" "cytoplasm (22.4%) cytosol (0.1%) plasma membrane (0.1%)" "aminoacyl-tRNA deacylase activity (25.3%) lyase activity (24.2%) aminoacyl-tRNA ligase activity (1.7%)" "IPR036754 (33.4%) IPR007214 (33%) IPR004369 (32%)" "YbaK/aminoacyl-tRNA synthetase-associated domain superfamily (33.4%) YbaK/aminoacyl-tRNA synthetase-associated domain (33%) Prolyl-tRNA editing protein, YbaK/EbsC (32%)" KVQDYLAQTGDNADYNQAYTWLKEIVDEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (44%) IPR019734 (44%) IPR013105 (12%)" "Tetratricopeptide-like helical domain superfamily (44%) Tetratricopeptide repeat (44%) Tetratricopeptide repeat 2 (12%)" SNSEKEAVLYIYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.7%) GO:0006508 (0.7%)" GO:0000428 (19.8%) "GO:0003677 (19.7%) GO:0003899 (19.7%) GO:0032549 (19.7%)" "DNA-templated transcription (19.7%) proteolysis (0.7%)" DNA-directed RNA polymerase complex (19.8%) "DNA binding (19.7%) DNA-directed RNA polymerase activity (19.7%) ribonucleoside binding (19.7%)" "IPR007642 (7.8%) IPR015712 (7.8%) IPR007645 (7.7%)" "RNA polymerase Rpb2, domain 2 (7.8%) DNA-directed RNA polymerase, subunit 2 (7.8%) RNA polymerase Rpb2, domain 3 (7.7%)" LGEHNIDVLEGNEQFIN Mammalia Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia 3.4.21.4 (100%) trypsin (100%) "GO:0006508 (25%) GO:0007586 (22.9%)" "GO:0005576 (12.5%) GO:0005615 (12.5%)" "GO:0004252 (25%) GO:0046872 (2.1%)" "proteolysis (25%) digestion (22.9%)" "extracellular region (12.5%) extracellular space (12.5%)" "serine-type endopeptidase activity (25%) metal ion binding (2.1%)" "IPR001254 (14.3%) IPR001314 (14.3%) IPR009003 (14.3%)" "Serine proteases, trypsin domain (14.3%) Peptidase S1A, chymotrypsin family (14.3%) Peptidase S1, PA clan (14.3%)" SAMLNIEEVVPADPKQPYDVR Candidatus Parabacteroides intestinipullorum Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Candidatus Parabacteroides intestinipullorum GO:0015977 (25%) GO:0009317 (25%) "GO:0003989 (25%) GO:0004658 (25%)" carbon fixation (25%) acetyl-CoA carboxylase complex (25%) "acetyl-CoA carboxylase activity (25%) propionyl-CoA carboxylase activity (25%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" YGCNPNQKPSR root "2.1.2.3 (93.9%) 3.5.4.10 (5.9%) 1.1.1.205 (0.2%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (93.9%) IMP cyclohydrolase (5.9%) IMP dehydrogenase (0.2%)" "GO:0006189 (24.9%) GO:0006164 (0%) GO:0006177 (0%)" GO:0005829 (24.9%) "GO:0003937 (25%) GO:0004643 (25%) GO:0003938 (0%)" "'de novo' IMP biosynthetic process (24.9%) purine nucleotide biosynthetic process (0%) GMP biosynthetic process (0%)" cytosol (24.9%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%) IMP dehydrogenase activity (0%)" "IPR002695 (25.1%) IPR016193 (25%) IPR024051 (25%)" "Bifunctional purine biosynthesis protein PurH-like (25.1%) Cytidine deaminase-like (25%) AICAR transformylase, duplicated domain superfamily (25%)" RFQIVQVDEPDNLSTISILR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0034605 (19.1%) GO:0042026 (19.1%) GO:0006508 (2.3%)" GO:0005737 (19.1%) "GO:0005524 (19.1%) GO:0016887 (19.1%) GO:0008233 (2.3%)" "cellular response to heat (19.1%) protein refolding (19.1%) proteolysis (2.3%)" cytoplasm (19.1%) "ATP binding (19.1%) ATP hydrolysis activity (19.1%) peptidase activity (2.3%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" CTNFGMDKNKIPGDGMVSGYGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (22.2%) GO:0009317 (22.2%) "GO:0003989 (22.2%) GO:0004658 (22.2%) GO:0016740 (11.1%)" carbon fixation (22.2%) acetyl-CoA carboxylase complex (22.2%) "acetyl-CoA carboxylase activity (22.2%) propionyl-CoA carboxylase activity (22.2%) transferase activity (11.1%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" KNTPYAAQMAAQDCAK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%) GO:0022627 (0.1%)" "GO:0003735 (20.1%) GO:0019843 (19.8%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (20.1%) rRNA binding (19.8%)" "IPR001971 (25.3%) IPR036967 (25.3%) IPR019981 (24.8%)" "Small ribosomal subunit protein uS11 (25.3%) Small ribosomal subunit protein uS11 superfamily (25.3%) Small ribosomal subunit protein uS11, bacteria (24.8%)" YEEHHNVIYTEDALQACVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0034605 (18.8%) GO:0006508 (12.5%)" GO:0005737 (18.8%) "GO:0005524 (18.8%) GO:0016887 (18.8%) GO:0008233 (12.5%)" "cellular response to heat (18.8%) proteolysis (12.5%)" cytoplasm (18.8%) "ATP binding (18.8%) ATP hydrolysis activity (18.8%) peptidase activity (12.5%)" "IPR001270 (8.3%) IPR001943 (8.3%) IPR003593 (8.3%)" "ClpA/B family (8.3%) UVR domain (8.3%) AAA+ ATPase domain (8.3%)" QVALNHTAGLSLPQQTQMSLFASFAILDKENR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "4.1.1.12 (93.8%) 2.6.1.1 (6.3%)" "aspartate 4-decarboxylase (93.8%) aspartate transaminase (6.3%)" GO:0006520 (27.4%) "GO:0030170 (27.4%) GO:0008483 (24.7%) GO:0047688 (9.6%)" amino acid metabolic process (27.4%) "pyridoxal phosphate binding (27.4%) transaminase activity (24.7%) aspartate 4-decarboxylase activity (9.6%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" RQDIESNLQYDAGDKGIYR root 2.6.1.16 (100%) glutamine--fructose-6-phosphate transaminase (isomerizing) (100%) "GO:0006002 (12.6%) GO:0006487 (12.6%) GO:0006047 (12.6%)" GO:0005829 (12.6%) "GO:0004360 (12.6%) GO:0097367 (12.5%) GO:0008483 (0.1%)" "fructose 6-phosphate metabolic process (12.6%) protein N-linked glycosylation (12.6%) UDP-N-acetylglucosamine metabolic process (12.6%)" cytosol (12.6%) "glutamine-fructose-6-phosphate transaminase (isomerizing) activity (12.6%) carbohydrate derivative binding (12.5%) transaminase activity (0.1%)" "IPR029055 (12.6%) IPR046348 (12.6%) IPR001347 (12.5%)" "Nucleophile aminohydrolases, N-terminal (12.6%) SIS domain superfamily (12.6%) SIS domain (12.5%)" LIPAAVEGGLHQIETASGAVLK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.8.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0000302 (13.9%) GO:0006979 (0.1%) GO:0042744 (0.1%)" "GO:0005829 (14.1%) GO:0032991 (13.9%) GO:0009321 (0.1%)" "GO:0016668 (14.4%) GO:0050660 (14.2%) GO:0051287 (13.9%)" "response to reactive oxygen species (13.9%) response to oxidative stress (0.1%) hydrogen peroxide catabolic process (0.1%)" "cytosol (14.1%) protein-containing complex (13.9%) alkyl hydroperoxide reductase complex (0.1%)" "oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (14.4%) flavin adenine dinucleotide binding (14.2%) NAD binding (13.9%)" "IPR023753 (11.6%) IPR036188 (11.6%) IPR050097 (11.6%)" "FAD/NAD(P)-binding domain (11.6%) FAD/NAD(P)-binding domain superfamily (11.6%) Ferredoxin--NADP reductase type 2 (11.6%)" QDAFDAIRDEFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (7.8%) IPR012162 (7.8%) IPR015847 (7.8%)" "Exoribonuclease, phosphorolytic domain 1 (7.8%) Polyribonucleotide nucleotidyltransferase (7.8%) Exoribonuclease, phosphorolytic domain 2 (7.8%)" DKGHFDTFQMK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.3.99.1 (66.7%) 1.3.5.1 (33.3%)" "Deleted entry (66.7%) succinate dehydrogenase (33.3%)" "GO:0009060 (23.9%) GO:0022904 (23.9%)" "GO:0009055 (23.9%) GO:0051537 (23.9%) GO:0016491 (3%)" "aerobic respiration (23.9%) respiratory electron transport chain (23.9%)" "electron transfer activity (23.9%) 2 iron, 2 sulfur cluster binding (23.9%) oxidoreductase activity (3%)" "IPR006058 (14.3%) IPR009051 (14.3%) IPR012675 (14.3%)" "2Fe-2S ferredoxin, iron-sulphur binding site (14.3%) Alpha-helical ferredoxin (14.3%) Beta-grasp domain superfamily (14.3%)" SSVEALVACMKEFEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" SFIIPDNVGGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.2%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.2%)" "IPR001672 (20.1%) IPR018189 (20.1%) IPR046348 (20%)" "Phosphoglucose isomerase (PGI) (20.1%) Phosphoglucose isomerase, conserved site (20.1%) SIS domain superfamily (20%)" LWEIIDWDVVEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.15.1.1 (100%) superoxide dismutase (100%) GO:0005737 (33.3%) "GO:0004784 (33.3%) GO:0046872 (33.3%)" cytoplasm (33.3%) "superoxide dismutase activity (33.3%) metal ion binding (33.3%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" SMIAIPSFSEYEDACR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.- (100%) Transaminases (100%) GO:0000105 (26.2%) "GO:0030170 (33.3%) GO:0008483 (26.2%) GO:0004400 (7.1%)" L-histidine biosynthetic process (26.2%) "pyridoxal phosphate binding (33.3%) transaminase activity (26.2%) histidinol-phosphate transaminase activity (7.1%)" "IPR004838 (16.9%) IPR004839 (16.9%) IPR015421 (16.9%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.9%) Aminotransferase, class I/classII, large domain (16.9%) Pyridoxal phosphate-dependent transferase, major domain (16.9%)" DMIGFGGSPR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR011703 (25%) IPR027417 (25%) IPR041628 (25%)" "ATPase, AAA-3 (25%) P-loop containing nucleoside triphosphate hydrolase (25%) ChlI/MoxR, AAA lid domain (25%)" NGYTSVTSHR Pseudomonadati Bacteria Pseudomonadati 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.8%) "GO:0000015 (16.8%) GO:0005576 (16.8%) GO:0009986 (15.8%)" "GO:0000287 (16.8%) GO:0004634 (16.8%)" glycolytic process (16.8%) "phosphopyruvate hydratase complex (16.8%) extracellular region (16.8%) cell surface (15.8%)" "magnesium ion binding (16.8%) phosphopyruvate hydratase activity (16.8%)" "IPR000941 (16.8%) IPR020809 (16.8%) IPR020810 (16.8%)" "Enolase (16.8%) Enolase, conserved site (16.8%) Enolase, C-terminal TIM barrel domain (16.8%)" FASEIKEMDINPLVATDR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (52.2%) GO:0003824 (30.4%) GO:0016874 (17.4%)" "ATP binding (52.2%) catalytic activity (30.4%) ligase activity (17.4%)" "IPR013815 (21.4%) IPR003781 (19.6%) IPR016102 (19.6%)" "ATP-grasp fold, subdomain 1 (21.4%) CoA-binding (19.6%) Succinyl-CoA synthetase-like (19.6%)" SVAAGYMQSNPYKDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.1%) GO:0005737 (14.1%) "GO:0000049 (14.1%) GO:0002161 (14.1%) GO:0004822 (14.1%)" isoleucyl-tRNA aminoacylation (14.1%) cytoplasm (14.1%) "tRNA binding (14.1%) aminoacyl-tRNA deacylase activity (14.1%) isoleucine-tRNA ligase activity (14.1%)" "IPR002300 (12.5%) IPR002301 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class Ia (12.5%) Isoleucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" SLVSIDQCSKEDILR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006520 (16.8%) GO:0006207 (16%) GO:0044205 (16%)" GO:0005829 (16.8%) "GO:0016597 (16.8%) GO:0004070 (16%) GO:0016743 (0.8%)" "amino acid metabolic process (16.8%) 'de novo' pyrimidine nucleobase biosynthetic process (16%) 'de novo' UMP biosynthetic process (16%)" cytosol (16.8%) "amino acid binding (16.8%) aspartate carbamoyltransferase activity (16%) carboxyl- or carbamoyltransferase activity (0.8%)" "IPR006130 (20.4%) IPR006132 (20.4%) IPR036901 (20.4%)" "Aspartate/ornithine carbamoyltransferase (20.4%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20.4%) Aspartate/ornithine carbamoyltransferase superfamily (20.4%)" QLLDEGSFEELDMFVQHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.-.-.- (100%) Ligases (100%) GO:0015977 (21.1%) GO:0009317 (21.1%) "GO:0004658 (23.3%) GO:0003989 (21.1%) GO:0016740 (11.1%)" carbon fixation (21.1%) acetyl-CoA carboxylase complex (21.1%) "propionyl-CoA carboxylase activity (23.3%) acetyl-CoA carboxylase activity (21.1%) transferase activity (11.1%)" "IPR011762 (20.2%) IPR029045 (20.2%) IPR034733 (20.2%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20.2%) ClpP/crotonase-like domain superfamily (20.2%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.2%)" GSGITQACGTGACATAVAAHLTGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.1.1.7 (100%) diaminopimelate epimerase (100%) GO:0009089 (33.3%) GO:0005829 (33.3%) GO:0008837 (33.3%) lysine biosynthetic process via diaminopimelate (33.3%) cytosol (33.3%) diaminopimelate epimerase activity (33.3%) "IPR001653 (50%) IPR018510 (50%)" "Diaminopimelate epimerase, DapF (50%) Diaminopimelate epimerase, active site (50%)" DALAFEQAAIAEETALQALLVR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.4.99.27 (100%) tRNA pseudouridine(13) synthase (100%) "GO:0031119 (19.2%) GO:0001522 (3.8%) GO:0008033 (2.3%)" GO:0005829 (23.1%) "GO:0003723 (23.1%) GO:0160150 (22.3%) GO:0009982 (1.5%)" "tRNA pseudouridine synthesis (19.2%) pseudouridine synthesis (3.8%) tRNA processing (2.3%)" cytosol (23.1%) "RNA binding (23.1%) tRNA pseudouridine(13) synthase activity (22.3%) pseudouridine synthase activity (1.5%)" "IPR043165 (15.3%) IPR001656 (14.8%) IPR020103 (14.8%)" "Pseudouridine synthase, TruD, insertion domain superfamily (15.3%) Pseudouridine synthase, TruD (14.8%) Pseudouridine synthase, catalytic domain superfamily (14.8%)" RSNQTWLPSIFNDFFDNDWMVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" DSSSLIRVIQMVQPDEIYNLAAQSHVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.47 (100%) GDP-mannose 4,6-dehydratase (100%) GO:0042351 (33.3%) "GO:0008446 (33.3%) GO:0070401 (33.3%)" 'de novo' GDP-L-fucose biosynthetic process (33.3%) "GDP-mannose 4,6-dehydratase activity (33.3%) NADP+ binding (33.3%)" "IPR006368 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "GDP-mannose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" HETPEHTSGYEGFYHLIGIQGDVEQSTVSYIIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.11.4 (95.7%) 3.4.11.- (4.3%)" "tripeptide aminopeptidase (95.7%) Aminopeptidases (4.3%)" "GO:0006508 (16.7%) GO:0043171 (15.9%) GO:0006518 (0.8%)" GO:0005829 (16.7%) "GO:0008237 (16.7%) GO:0008270 (16.7%) GO:0045148 (16.7%)" "proteolysis (16.7%) peptide catabolic process (15.9%) peptide metabolic process (0.8%)" cytosol (16.7%) "metallopeptidase activity (16.7%) zinc ion binding (16.7%) tripeptide aminopeptidase activity (16.7%)" "IPR001261 (20%) IPR002933 (20%) IPR010161 (20%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%) Peptidase M20 (20%) Peptidase M20B, tripeptide aminopeptidase (20%)" YDVTKPHVNVGTIGHVDHGK SSFVNMITMGMDKVIVGQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR011703 (25%) IPR027417 (25%) IPR041628 (25%)" "ATPase, AAA-3 (25%) P-loop containing nucleoside triphosphate hydrolase (25%) ChlI/MoxR, AAA lid domain (25%)" LSEEEVKKPDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" FNSLTPEQQR root 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (0.7%) GO:0005975 (0%) GO:0006950 (0%)" "GO:0005829 (43%) GO:0005737 (0%)" "GO:0008861 (50.8%) GO:0016829 (5%) GO:0003824 (0.3%)" "glucose metabolic process (0.7%) carbohydrate metabolic process (0%) response to stress (0%)" "cytosol (43%) cytoplasm (0%)" "formate C-acetyltransferase activity (50.8%) lyase activity (5%) catalytic activity (0.3%)" "IPR001150 (25.1%) IPR019777 (25%) IPR050244 (25%)" "Glycine radical domain (25.1%) Formate C-acetyltransferase glycine radical, conserved site (25%) Autonomous Glycyl Radical Cofactor (25%)" DAALSCDQFFVNHR root "GO:0006412 (32.2%) GO:0000028 (0.5%) GO:0002181 (0.3%)" "GO:0022627 (32.5%) GO:0005840 (1.6%) GO:0005737 (0.3%)" "GO:0003735 (32.5%) GO:0008270 (0.3%)" "translation (32.2%) ribosomal small subunit assembly (0.5%) cytoplasmic translation (0.3%)" "cytosolic small ribosomal subunit (32.5%) ribosome (1.6%) cytoplasm (0.3%)" "structural constituent of ribosome (32.5%) zinc ion binding (0.3%)" "IPR001865 (25.1%) IPR005706 (25.1%) IPR023591 (25.1%)" "Small ribosomal subunit protein uS2 (25.1%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.1%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.1%)" TVFFTIGSSELSPREEMNLSYLAAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (25%) IPR006665 (25%) IPR036737 (25%)" "Outer membrane protein, bacterial (25%) OmpA-like domain (25%) OmpA-like domain superfamily (25%)" EIVDISGLTHGVGWCAPQQGACK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides TLASHALCIFGDHQDVMSAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (75%) 1.2.7.- (25%)" "pyruvate synthase (75%) With an iron-sulfur protein as acceptor (25%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (12.1%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.5%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (12.1%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" TKLEKVEQFDK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" EGFDKLFELAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) GO:0033539 (32.8%) "GO:0009055 (32.8%) GO:0050660 (32.8%) GO:0016491 (1.5%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (32.8%) "electron transfer activity (32.8%) flavin adenine dinucleotide binding (32.8%) oxidoreductase activity (1.5%)" "IPR001308 (16.7%) IPR014729 (16.7%) IPR014730 (16.7%)" "Electron transfer flavoprotein alpha subunit/FixB (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.7%)" CDGADEAEALAAAIELIK Collinsella Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella 2.7.11.- (100%) Protein-serine/threonine kinases (100%) GO:0009401 (45.5%) GO:0005737 (45.5%) GO:0016740 (9.1%) phosphoenolpyruvate-dependent sugar phosphotransferase system (45.5%) cytoplasm (45.5%) transferase activity (9.1%) "IPR000032 (33.3%) IPR035895 (33.3%) IPR050399 (33.3%)" "Phosphocarrier protein HPr-like (33.3%) HPr-like superfamily (33.3%) Phosphocarrier protein HPr (33.3%)" GIIYVDKTENFAAAAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.1.23 (100%) orotidine-5'-phosphate decarboxylase (100%) "GO:0006207 (33%) GO:0044205 (33%)" "GO:0004590 (33%) GO:0016829 (1.1%)" "'de novo' pyrimidine nucleobase biosynthetic process (33%) 'de novo' UMP biosynthetic process (33%)" "orotidine-5'-phosphate decarboxylase activity (33%) lyase activity (1.1%)" "IPR001754 (25%) IPR011060 (25%) IPR011995 (25%)" "Orotidine 5'-phosphate decarboxylase domain (25%) Ribulose-phosphate binding barrel (25%) Orotidine 5'-phosphate decarboxylase, type 2 (25%)" IYGASSIVYTTLADKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.4.3 (100%) formate--tetrahydrofolate ligase (100%) GO:0035999 (33.3%) "GO:0004329 (33.3%) GO:0005524 (33.3%)" tetrahydrofolate interconversion (33.3%) "formate-tetrahydrofolate ligase activity (33.3%) ATP binding (33.3%)" "IPR000559 (33.3%) IPR020628 (33.3%) IPR027417 (33.3%)" "Formate-tetrahydrofolate ligase, FTHFS (33.3%) Formate-tetrahydrofolate ligase, FTHFS, conserved site (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" TNEEIEGFLKK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001854 (25%) IPR018254 (25%) IPR036049 (25%)" "Large ribosomal subunit protein uL29 (25%) Large ribosomal subunit protein uL29, conserved site (25%) Large ribosomal subunit protein uL29 superfamily (25%)" GKETVDTIHR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (16%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (16%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" VVDLFSPIGK root 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.5%) GO:0005829 (13.5%) "GO:0003723 (14.5%) GO:0005524 (14.5%) GO:0008186 (14.5%)" DNA-templated transcription termination (14.5%) cytosol (13.5%) "RNA binding (14.5%) ATP binding (14.5%) ATP-dependent activity, acting on RNA (14.5%)" "IPR004665 (10.8%) IPR027417 (10.8%) IPR000194 (10.7%)" "Transcription termination factor Rho (10.8%) P-loop containing nucleoside triphosphate hydrolase (10.8%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.7%)" AIGQNVLTAVKPSQLMVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20.1%) "GO:0048500 (19.6%) GO:0005786 (0.6%)" "GO:0003924 (20.1%) GO:0005525 (20.1%) GO:0008312 (19.3%)" SRP-dependent cotranslational protein targeting to membrane (20.1%) "signal recognition particle (19.6%) signal recognition particle, endoplasmic reticulum targeting (0.6%)" "GTPase activity (20.1%) GTP binding (20.1%) 7S RNA binding (19.3%)" "IPR022941 (11.3%) IPR042101 (11.3%) IPR027417 (11.2%)" "Signal recognition particle, SRP54 subunit (11.3%) Signal recognition particle SRP54, N-terminal domain superfamily (11.3%) P-loop containing nucleoside triphosphate hydrolase (11.2%)" NWIDKEEYPQSAAIDLR root 4.1.1.15 (100%) glutamate decarboxylase (100%) "GO:0006538 (21.8%) GO:0051454 (12.2%)" "GO:0005829 (21.8%) GO:0016020 (0.1%)" "GO:0004351 (21.8%) GO:0030170 (21.8%) GO:0016829 (0.4%)" "L-glutamate catabolic process (21.8%) intracellular pH elevation (12.2%)" "cytosol (21.8%) membrane (0.1%)" "glutamate decarboxylase activity (21.8%) pyridoxal phosphate binding (21.8%) lyase activity (0.4%)" "IPR002129 (21.5%) IPR010107 (21.5%) IPR015424 (21.5%)" "Pyridoxal phosphate-dependent decarboxylase (21.5%) Glutamate decarboxylase (21.5%) Pyridoxal phosphate-dependent transferase (21.5%)" CGWIDLVALK root 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.6%) GO:0046040 (16.2%) GO:0009312 (0%)" "GO:0005737 (12.7%) GO:0009507 (4.3%) GO:0016020 (0.2%)" "GO:0004019 (16.6%) GO:0005525 (16.5%) GO:0000287 (15.8%)" "'de novo' AMP biosynthetic process (16.6%) IMP metabolic process (16.2%) oligosaccharide biosynthetic process (0%)" "cytoplasm (12.7%) chloroplast (4.3%) membrane (0.2%)" "adenylosuccinate synthase activity (16.6%) GTP binding (16.5%) magnesium ion binding (15.8%)" "IPR001114 (14.6%) IPR027417 (14.4%) IPR042111 (14.4%)" "Adenylosuccinate synthetase (14.6%) P-loop containing nucleoside triphosphate hydrolase (14.4%) Adenylosuccinate synthetase, domain 3 (14.4%)" VGEEVVGVDPQYFRPTEVELLIGDATK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.47 (100%) GDP-mannose 4,6-dehydratase (100%) GO:0042351 (33.3%) "GO:0008446 (33.3%) GO:0070401 (33.3%)" 'de novo' GDP-L-fucose biosynthetic process (33.3%) "GDP-mannose 4,6-dehydratase activity (33.3%) NADP+ binding (33.3%)" "IPR006368 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "GDP-mannose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" MVHNGIEYGDMQLISEAYSLLK Pseudomonadati Bacteria Pseudomonadati "1.1.1.44 (97.3%) 1.1.1.343 (2.7%)" "phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (97.3%) phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) (2.7%)" "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.6%) IPR006114 (12.6%) IPR006115 (12.6%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.6%) 6-phosphogluconate dehydrogenase, C-terminal (12.6%) 6-phosphogluconate dehydrogenase, NADP-binding (12.6%)" VFTGVAGTHTIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.- (100%) Transaminases (100%) "GO:0008483 (33.3%) GO:0030170 (33.3%) GO:0042802 (33.3%)" "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%) identical protein binding (33.3%)" "IPR005814 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class-III (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" IGQQVLDYVAEHLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016747 (100%) acyltransferase activity, transferring groups other than amino-acyl groups (100%) "IPR000182 (50%) IPR016181 (50%)" "GNAT domain (50%) Acyl-CoA N-acyltransferase (50%)" AIGTPAHIYFK Bacteria Bacteria 4.2.1.20 (100%) tryptophan synthase (100%) GO:0000162 (0.1%) "GO:0005737 (24.9%) GO:0016020 (0.6%)" "GO:0004834 (25.1%) GO:0052684 (25.1%) GO:0030170 (24.2%)" L-tryptophan biosynthetic process (0.1%) "cytoplasm (24.9%) membrane (0.6%)" "tryptophan synthase activity (25.1%) L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity (25.1%) pyridoxal phosphate binding (24.2%)" "IPR023026 (20.5%) IPR001926 (20.4%) IPR036052 (20.3%)" "Tryptophan synthase beta chain/beta chain-like (20.5%) Tryptophan synthase beta chain-like, PALP domain (20.4%) Tryptophan synthase beta chain-like, PALP domain superfamily (20.3%)" NKQASVQAIKEKDSEAAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" LCWTAEIAHMAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.3.1.6 (100%) ribose-5-phosphate isomerase (100%) "GO:0009052 (33.3%) GO:0019316 (33.3%)" GO:0004751 (33.3%) "pentose-phosphate shunt, non-oxidative branch (33.3%) D-allose catabolic process (33.3%)" ribose-5-phosphate isomerase activity (33.3%) "IPR003500 (33.3%) IPR004785 (33.3%) IPR036569 (33.3%)" "Sugar-phosphate isomerase, RpiB/LacA/LacB family (33.3%) Ribose 5-phosphate isomerase B (33.3%) Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily (33.3%)" ILYGGSVKPANVK Bacillota Bacteria Bacillati Bacillota 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0019563 (16.6%)" GO:0005829 (16.6%) "GO:0004807 (16.6%) GO:0016853 (0.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) glycerol catabolic process (16.6%)" cytosol (16.6%) "triose-phosphate isomerase activity (16.6%) isomerase activity (0.6%)" "IPR000652 (20.1%) IPR013785 (20.1%) IPR020861 (20.1%)" "Triosephosphate isomerase (20.1%) Aldolase-type TIM barrel (20.1%) Triosephosphate isomerase, active site (20.1%)" IVQVIGPVVDVK Bacteria Bacteria 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0045259 (23.2%) GO:0005886 (22.8%)" "GO:0005524 (23.2%) GO:0046933 (23.2%) GO:0016787 (6.6%)" "proton-transporting ATP synthase complex (23.2%) plasma membrane (22.8%)" "ATP binding (23.2%) proton-transporting ATP synthase activity, rotational mechanism (23.2%) hydrolase activity (6.6%)" "IPR000194 (10%) IPR003593 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" LLNNVETGTVFEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005506 (50%) GO:0016491 (20%) GO:0016692 (20%)" "iron ion binding (50%) oxidoreductase activity (20%) NADH peroxidase activity (20%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" EAGADYVGLDEYIEKIK root "GO:0006412 (17%) GO:0006417 (15.8%) GO:0006354 (0.1%)" "GO:0015934 (16.9%) GO:0005840 (0.2%) GO:1990904 (0.2%)" "GO:0003735 (17%) GO:0019843 (16.9%) GO:0000049 (15.8%)" "translation (17%) regulation of translation (15.8%) DNA-templated transcription elongation (0.1%)" "large ribosomal subunit (16.9%) ribosome (0.2%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (17%) rRNA binding (16.9%) tRNA binding (15.8%)" "IPR016095 (16.6%) IPR023674 (16.6%) IPR028364 (16.6%)" "Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.6%) Ribosomal protein uL1-like (16.6%) Ribosomal protein uL1/ribosomal biogenesis protein (16.6%)" VSGIRPVFEKLDCLDFDGLDAVFNKYK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR001509 (33.3%) IPR005886 (33.3%) IPR036291 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%)" AIKDIDIDDNAFK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) "GO:0048500 (19.3%) GO:0005786 (0.6%)" "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (20%)" SRP-dependent cotranslational protein targeting to membrane (20%) "signal recognition particle (19.3%) signal recognition particle, endoplasmic reticulum targeting (0.6%)" "GTPase activity (20%) GTP binding (20%) 7S RNA binding (20%)" "IPR004125 (11.3%) IPR022941 (11.3%) IPR036891 (11.3%)" "Signal recognition particle, SRP54 subunit, M-domain (11.3%) Signal recognition particle, SRP54 subunit (11.3%) Signal recognition particle, SRP54 subunit, M-domain superfamily (11.3%)" STLSSVLVGNPAFEVTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016226 (0.7%) GO:1990229 (0.7%) "GO:0005524 (49.3%) GO:0016887 (49.3%)" iron-sulfur cluster assembly (0.7%) iron-sulfur cluster assembly complex (0.7%) "ATP binding (49.3%) ATP hydrolysis activity (49.3%)" "IPR003439 (25.4%) IPR010230 (25.4%) IPR027417 (25.4%)" "ABC transporter-like, ATP-binding domain (25.4%) FeS cluster assembly SUF system, ATPase SufC (25.4%) P-loop containing nucleoside triphosphate hydrolase (25.4%)" IVTGIEEQRQPQESAQQYVVR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.6.1.9 (100%) nucleotide diphosphatase (100%) "GO:0009117 (29.6%) GO:0008360 (0.3%)" "GO:0005737 (28.4%) GO:0005886 (0.3%)" "GO:0047429 (18.7%) GO:0036218 (10.9%) GO:0036221 (10.9%)" "nucleotide metabolic process (29.6%) regulation of cell shape (0.3%)" "cytoplasm (28.4%) plasma membrane (0.3%)" "nucleoside triphosphate diphosphatase activity (18.7%) dTTP diphosphatase activity (10.9%) UTP diphosphatase activity (10.9%)" "IPR029001 (49.8%) IPR003697 (49.4%) IPR007227 (0.4%)" "Inosine triphosphate pyrophosphatase-like (49.8%) Nucleoside triphosphate pyrophosphatase Maf-like protein (49.4%) Cell shape-determining protein MreD (0.4%)" VTIPGSDNEYYK Bacteria Bacteria "GO:0043165 (33.2%) GO:0051205 (33.2%) GO:0007155 (0%)" "GO:1990063 (33.2%) GO:0019867 (0.3%) GO:0009279 (0%)" "Gram-negative-bacterium-type cell outer membrane assembly (33.2%) protein insertion into membrane (33.2%) cell adhesion (0%)" "Bam protein complex (33.2%) outer membrane (0.3%) cell outer membrane (0%)" "IPR000184 (20.4%) IPR039910 (20.2%) IPR023707 (20%)" "Bacterial surface antigen (D15) (20.4%) Surface antigen D15-like (20.2%) Outer membrane protein assembly factor BamA (20%)" LIQGGGGGQPHFATAGGKNPDGLNAAVEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.2%) GO:0005737 (14.2%) "GO:0000049 (14.2%) GO:0002161 (14.2%) GO:0004813 (14.2%)" alanyl-tRNA aminoacylation (14.2%) cytoplasm (14.2%) "tRNA binding (14.2%) aminoacyl-tRNA deacylase activity (14.2%) alanine-tRNA ligase activity (14.2%)" "IPR002318 (9.1%) IPR003156 (9.1%) IPR009000 (9.1%)" "Alanine-tRNA ligase, class IIc (9.1%) DHHA1 domain (9.1%) Translation protein, beta-barrel domain superfamily (9.1%)" GHGFSVFDDAAYIGGICAEGAASYTR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.12 (100%) aspartate--tRNA ligase (100%) "GO:0006422 (19%) GO:0006418 (1.3%)" GO:0005737 (20.3%) "GO:0005524 (20.3%) GO:0003676 (19%) GO:0004815 (19%)" "aspartyl-tRNA aminoacylation (19%) tRNA aminoacylation for protein translation (1.3%)" cytoplasm (20.3%) "ATP binding (20.3%) nucleic acid binding (19%) aspartate-tRNA ligase activity (19%)" "IPR004115 (9.5%) IPR004364 (9.5%) IPR029351 (9.5%)" "GAD-like domain superfamily (9.5%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.5%) GAD domain (9.5%)" VYEETGISENDIAKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.6%) "GO:0005829 (16.6%) GO:0005960 (16.6%)" "GO:0004375 (16.6%) GO:0016594 (16.6%) GO:0030170 (16.6%)" glycine decarboxylation via glycine cleavage system (16.6%) "cytosol (16.6%) glycine cleavage complex (16.6%)" "glycine dehydrogenase (decarboxylating) activity (16.6%) glycine binding (16.6%) pyridoxal phosphate binding (16.6%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" SQWIIGGDGASYDIGYGGLDHVIASGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (78%) 1.2.7.- (22%)" "pyruvate synthase (78%) With an iron-sulfur protein as acceptor (22%)" "GO:0006979 (14.8%) GO:0022900 (14.5%) GO:0044281 (11.9%)" "GO:0030976 (14.7%) GO:0005506 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.8%) electron transport chain (14.5%) small molecule metabolic process (11.9%)" "thiamine pyrophosphate binding (14.7%) iron ion binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR029061 (7.8%) IPR050722 (7.8%) IPR011766 (7.8%)" "Thiamin diphosphate-binding fold (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%) Thiamine pyrophosphate enzyme, TPP-binding (7.8%)" TFAEKPAEFDPRK Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.4%) GO:0030388 (24.4%) GO:0005975 (0.5%)" GO:0016020 (0.5%) "GO:0008270 (24.9%) GO:0004332 (24.4%) GO:0016829 (0.5%)" "glycolytic process (24.4%) fructose 1,6-bisphosphate metabolic process (24.4%) carbohydrate metabolic process (0.5%)" membrane (0.5%) "zinc ion binding (24.9%) fructose-bisphosphate aldolase activity (24.4%) lyase activity (0.5%)" "IPR000771 (25.1%) IPR013785 (25.1%) IPR050246 (25.1%)" "Fructose-bisphosphate aldolase, class-II (25.1%) Aldolase-type TIM barrel (25.1%) Class II Fructose-bisphosphate Aldolase (25.1%)" SLIHVPSPDTIDKIWIDSDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (48.9%) "GO:0004332 (48.9%) GO:0016829 (2.1%)" glycolytic process (48.9%) "fructose-bisphosphate aldolase activity (48.9%) lyase activity (2.1%)" "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" VSLANLNEKDYIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.6.1.- (100%) Transaminases (100%) GO:0006520 (28.3%) "GO:0030170 (28.3%) GO:0008483 (27.2%) GO:0016829 (15.2%)" amino acid metabolic process (28.3%) "pyridoxal phosphate binding (28.3%) transaminase activity (27.2%) lyase activity (15.2%)" "IPR004838 (14.3%) IPR004839 (14.3%) IPR015421 (14.3%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (14.3%) Aminotransferase, class I/classII, large domain (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%)" VSKDGVITIEEAKGTDTTIGVVEGMQFDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (19.3%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (11.9%) GO:1990220 (0.1%)" "GO:0005524 (19.3%) GO:0140662 (19.3%) GO:0016853 (17.8%)" "protein refolding (19.3%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (11.9%) GroEL-GroES complex (0.1%)" "ATP binding (19.3%) ATP-dependent protein folding chaperone (19.3%) isomerase activity (17.8%)" "IPR001844 (17.7%) IPR002423 (17.7%) IPR027409 (17.6%)" "Chaperonin Cpn60/GroEL (17.7%) Chaperonin Cpn60/GroEL/TCP-1 family (17.7%) GroEL-like apical domain superfamily (17.6%)" INVGAALTELGEDAPEDYIVHGPNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0000902 (25.4%) GO:0008360 (25.4%)" GO:0005737 (25.4%) GO:0005524 (23.8%) "cell morphogenesis (25.4%) regulation of cell shape (25.4%)" cytoplasm (25.4%) ATP binding (23.8%) "IPR004753 (33.3%) IPR043129 (33.3%) IPR056546 (33.3%)" "Cell shape determining protein MreB (33.3%) ATPase, nucleotide binding domain (33.3%) MreB/MamK-like (33.3%)" TGPEAILELEHMGLPFSR root "1.3.5.1 (98.9%) 1.3.99.1 (0.7%) 1.-.-.- (0.1%)" "succinate dehydrogenase (98.9%) Deleted entry (0.7%) Oxidoreductases (0.1%)" "GO:0009061 (14.4%) GO:0006099 (13.8%) GO:0022900 (13.8%)" "GO:0005886 (14.4%) GO:0045273 (0%) GO:0005743 (0%)" "GO:0009055 (14.4%) GO:0050660 (14.4%) GO:0008177 (11.2%)" "anaerobic respiration (14.4%) tricarboxylic acid cycle (13.8%) electron transport chain (13.8%)" "plasma membrane (14.4%) respiratory chain complex II (succinate dehydrogenase) (0%) mitochondrial inner membrane (0%)" "electron transfer activity (14.4%) flavin adenine dinucleotide binding (14.4%) succinate dehydrogenase (quinone) activity (11.2%)" "IPR003953 (11.4%) IPR030664 (11.4%) IPR036188 (11.4%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (11.4%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (11.4%) FAD/NAD(P)-binding domain superfamily (11.4%)" CKIEQAPGQHGAR root "GO:0042274 (19.7%) GO:0006412 (19.7%) GO:0006353 (0.1%)" "GO:0015935 (19.7%) GO:0005840 (0.6%) GO:0005737 (0%)" "GO:0019843 (19.9%) GO:0003735 (19.7%) GO:0016787 (0.2%)" "ribosomal small subunit biogenesis (19.7%) translation (19.7%) DNA-templated transcription termination (0.1%)" "small ribosomal subunit (19.7%) ribosome (0.6%) cytoplasm (0%)" "rRNA binding (19.9%) structural constituent of ribosome (19.7%) hydrolase activity (0.2%)" "IPR001912 (16.8%) IPR002942 (16.7%) IPR018079 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.8%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, conserved site (16.7%)" VVEHEATPSILGMVEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR005996 (32.4%) IPR016082 (32.4%) IPR036919 (32.4%)" "Large ribosomal subunit protein uL30, bacteria (32.4%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (32.4%) Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily (32.4%)" AVENMLDNLGVPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "7.2.1.1 (96%) 1.6.5.- (4%)" "NADH:ubiquinone reductase (Na(+)-transporting) (96%) With a quinone or similar compound as acceptor (4%)" GO:0006814 (16.7%) GO:0005886 (16.7%) "GO:0009055 (16.7%) GO:0016655 (16.7%) GO:0046872 (16.7%)" sodium ion transport (16.7%) plasma membrane (16.7%) "electron transfer activity (16.7%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (16.7%) metal ion binding (16.7%)" "IPR001041 (10%) IPR001433 (10%) IPR001709 (10%)" "2Fe-2S ferredoxin-type iron-sulfur binding domain (10%) Oxidoreductase FAD/NAD(P)-binding (10%) Flavoprotein pyridine nucleotide cytochrome reductase (10%)" EILIISTPQDLPGFRR Bacteria Bacteria 2.7.7.24 (100%) glucose-1-phosphate thymidylyltransferase (100%) "GO:0008879 (50.7%) GO:0046872 (49.3%)" "glucose-1-phosphate thymidylyltransferase activity (50.7%) metal ion binding (49.3%)" "IPR005835 (33.3%) IPR005907 (33.3%) IPR029044 (33.3%)" "Nucleotidyl transferase domain (33.3%) Glucose-1-phosphate thymidylyltransferase, short form (33.3%) Nucleotide-diphospho-sugar transferases (33.3%)" LVSETGEQLGIMSAR NATANGAIVHWAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006089 (32.9%) GO:1903457 (0.4%)" "GO:0051539 (33.3%) GO:0046872 (32.9%) GO:0004459 (0.4%)" "lactate metabolic process (32.9%) lactate catabolic process (0.4%)" "4 iron, 4 sulfur cluster binding (33.3%) metal ion binding (32.9%) L-lactate dehydrogenase (NAD+) activity (0.4%)" "IPR003741 (13.8%) IPR004452 (13.8%) IPR024185 (13.8%)" "LUD domain (13.8%) L-lactate oxidation iron-sulfur protein LutB/LldF (13.8%) 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily (13.8%)" SSHEAVLSELEKYFTVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005996 (33.3%) GO:0005737 (33.3%) GO:0016861 (33.3%) monosaccharide metabolic process (33.3%) cytoplasm (33.3%) intramolecular oxidoreductase activity, interconverting aldoses and ketoses (33.3%) IPR009015 (100%) L-fucose isomerase, N-terminal/central domain superfamily (100%) TFDDKAPETVK root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (33.1%) GO:0009245 (0.1%) GO:0061077 (0.1%)" "GO:0005737 (32.5%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0003755 (33.5%) GO:0016853 (0.5%) GO:0008758 (0.1%)" "protein folding (33.1%) lipid A biosynthetic process (0.1%) obsolete chaperone-mediated protein folding (0.1%)" "cytoplasm (32.5%) cytosol (0.1%) plasma membrane (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (33.5%) isomerase activity (0.5%) UDP-2,3-diacylglucosamine hydrolase activity (0.1%)" "IPR029000 (20.2%) IPR002130 (20.1%) IPR020892 (20%)" "Cyclophilin-like domain superfamily (20.2%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (20.1%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (20%)" MVQAPIFHVNADDPEAVAFVTR root 1.2.4.2 (100%) oxoglutarate dehydrogenase (succinyl-transferring) (100%) "GO:0006099 (19.6%) GO:0006096 (1.5%)" "GO:0005829 (19.6%) GO:0045252 (19.6%) GO:0005737 (0%)" "GO:0030976 (19.6%) GO:0004591 (19.6%) GO:0016491 (0.2%)" "tricarboxylic acid cycle (19.6%) glycolytic process (1.5%)" "cytosol (19.6%) oxoglutarate dehydrogenase complex (19.6%) cytoplasm (0%)" "thiamine pyrophosphate binding (19.6%) oxoglutarate dehydrogenase (succinyl-transferring) activity (19.6%) oxidoreductase activity (0.2%)" "IPR001017 (14.7%) IPR011603 (14.7%) IPR029061 (14.7%)" "Dehydrogenase, E1 component (14.7%) 2-oxoglutarate dehydrogenase E1 component (14.7%) Thiamin diphosphate-binding fold (14.7%)" EAITQPVELR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" YAEAEVEKHINFIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.3.99.- (100%) With other acceptors (100%) "GO:0050660 (50%) GO:0003995 (47.1%) GO:0016937 (2.9%)" "flavin adenine dinucleotide binding (50%) acyl-CoA dehydrogenase activity (47.1%) short-chain fatty acyl-CoA dehydrogenase activity (2.9%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009075 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.1%)" ALPAFAAASASR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10.1%) IPR006203 (10.1%) IPR006204 (10.1%)" "Galactokinase (10.1%) GHMP kinase, ATP-binding, conserved site (10.1%) GHMP kinase N-terminal domain (10.1%)" ENNLPIIVFDMDTVGNLKK Pseudomonadati Bacteria Pseudomonadati 2.7.4.22 (100%) UMP kinase (100%) "GO:0006225 (19.7%) GO:0044210 (19.4%)" "GO:0005737 (19.4%) GO:0016020 (1.8%)" "GO:0005524 (19.7%) GO:0033862 (19.7%) GO:0016301 (0.3%)" "UDP biosynthetic process (19.7%) 'de novo' CTP biosynthetic process (19.4%)" "cytoplasm (19.4%) membrane (1.8%)" "ATP binding (19.7%) UMP kinase activity (19.7%) kinase activity (0.3%)" "IPR001048 (25.2%) IPR036393 (25.2%) IPR011817 (24.8%)" "Aspartate/glutamate/uridylate kinase (25.2%) Acetylglutamate kinase-like superfamily (25.2%) Uridylate kinase (24.8%)" VIPMNDRGELLLDEYEKLFTDR Bacteroides oleiciplenus Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides oleiciplenus 2.8.1.7 (100%) cysteine desulfurase (100%) GO:0006534 (33.3%) "GO:0030170 (33.3%) GO:0031071 (33.3%)" cysteine metabolic process (33.3%) "pyridoxal phosphate binding (33.3%) cysteine desulfurase activity (33.3%)" "IPR000192 (16.7%) IPR010970 (16.7%) IPR015421 (16.7%)" "Aminotransferase class V domain (16.7%) Cysteine desulfurase, SufS (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" GVSYLPEDRNYDLYQLACK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.17.4.2 (98.5%) 1.1.98.6 (1.5%)" "ribonucleoside-triphosphate reductase (thioredoxin) (98.5%) ribonucleoside-triphosphate reductase (formate) (1.5%)" "GO:0006260 (16.6%) GO:0009265 (16.6%)" GO:0031250 (16.6%) "GO:0004748 (16.6%) GO:0005524 (16.6%) GO:0008998 (16.6%)" "DNA replication (16.6%) 2'-deoxyribonucleotide biosynthetic process (16.6%)" anaerobic ribonucleoside-triphosphate reductase complex (16.6%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.6%) ATP binding (16.6%) ribonucleoside-triphosphate reductase (thioredoxin) activity (16.6%)" "IPR005144 (50%) IPR012833 (50%)" "ATP-cone domain (50%) Ribonucleoside-triphosphate reductase, anaerobic (50%)" VDMEAAGENAPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (32.9%) "GO:0022627 (32.9%) GO:0005840 (1.2%)" GO:0003735 (32.9%) translation (32.9%) "cytosolic small ribosomal subunit (32.9%) ribosome (1.2%)" structural constituent of ribosome (32.9%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" MGHIHLVVPVAHIWYFR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.2%) GO:0000428 (17.2%) "GO:0003677 (17.2%) GO:0003899 (17.2%) GO:0000287 (15.5%)" DNA-templated transcription (17.2%) DNA-directed RNA polymerase complex (17.2%) "DNA binding (17.2%) DNA-directed RNA polymerase activity (17.2%) magnesium ion binding (15.5%)" "IPR007080 (9.4%) IPR044893 (9.4%) IPR045867 (9.4%)" "RNA polymerase Rpb1, domain 1 (9.4%) RNA polymerase Rpb1, clamp domain superfamily (9.4%) DNA-directed RNA polymerase, subunit beta-prime (9.4%)" VKEIPILLLTGYLGSGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0016787 (100%) hydrolase activity (100%) "IPR003495 (20%) IPR011629 (20%) IPR027417 (20%)" "CobW/HypB/UreG, nucleotide-binding domain (20%) Zinc chaperone CobW-like, C-terminal (20%) P-loop containing nucleoside triphosphate hydrolase (20%)" AVNAFGDTKTNSAALAQILAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (47.1%) IPR019734 (47.1%) IPR013105 (5.9%)" "Tetratricopeptide-like helical domain superfamily (47.1%) Tetratricopeptide repeat (47.1%) Tetratricopeptide repeat 2 (5.9%)" AGDNAPMAYIELVDR root "GO:0006412 (33.1%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (33.1%) GO:0005840 (0.6%) GO:0005737 (0%)" GO:0003735 (33.1%) "translation (33.1%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (33.1%) ribosome (0.6%) cytoplasm (0%)" structural constituent of ribosome (33.1%) "IPR000456 (33.4%) IPR036373 (33.3%) IPR047859 (33.3%)" "Large ribosomal subunit protein bL17 (33.4%) Large ribosomal subunit protein bL17 superfamily (33.3%) Large ribosomal subunit protein bL17, conserved site (33.3%)" VKQEDVTLTGNVHQTFKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016787 (100%) hydrolase activity (100%) "IPR001466 (20%) IPR005180 (20%) IPR012338 (20%)" "Beta-lactamase-related (20%) Domain of unknown function DUF302 (20%) Beta-lactamase/transpeptidase-like (20%)" LVLLDSVVKHELASSAYNKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20.1%) GO:0005829 (20.1%) "GO:0004335 (20.1%) GO:0005524 (20.1%) GO:0046872 (19.8%)" galactose metabolic process (20.1%) cytosol (20.1%) "galactokinase activity (20.1%) ATP binding (20.1%) metal ion binding (19.8%)" "IPR000705 (10.1%) IPR006203 (10.1%) IPR006204 (10.1%)" "Galactokinase (10.1%) GHMP kinase, ATP-binding, conserved site (10.1%) GHMP kinase N-terminal domain (10.1%)" KMSENVGVER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001857 (25%) IPR008991 (25%) IPR018257 (25%)" "Large ribosomal subunit protein bL19 (25%) Translation protein SH3-like domain superfamily (25%) Large ribosomal subunit protein bL19, conserved site (25%)" VSGYAVNFVK root 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (24.6%) GO:0005975 (2%)" GO:0005829 (35.5%) "GO:0008861 (35.5%) GO:0016829 (2.1%) GO:0016746 (0.1%)" "glucose metabolic process (24.6%) carbohydrate metabolic process (2%)" cytosol (35.5%) "formate C-acetyltransferase activity (35.5%) lyase activity (2.1%) acyltransferase activity (0.1%)" "IPR001150 (22.2%) IPR019777 (22.1%) IPR050244 (22.1%)" "Glycine radical domain (22.2%) Formate C-acetyltransferase glycine radical, conserved site (22.1%) Autonomous Glycyl Radical Cofactor (22.1%)" VVEHESTPSILGMVDKVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR005996 (33%) IPR016082 (33%) IPR036919 (33%)" "Large ribosomal subunit protein uL30, bacteria (33%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (33%) Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily (33%)" GTLLVHADLTFENLSHTR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.2.1.32 (100%) L(+)-tartrate dehydratase (100%) "GO:0006099 (0.5%) GO:0044010 (0.5%) GO:1901275 (0.5%)" "GO:0005829 (0.5%) GO:1902494 (0.5%)" "GO:0046872 (32.3%) GO:0051539 (32.3%) GO:0016829 (17.7%)" "tricarboxylic acid cycle (0.5%) single-species biofilm formation (0.5%) tartrate metabolic process (0.5%)" "cytosol (0.5%) catalytic complex (0.5%)" "metal ion binding (32.3%) 4 iron, 4 sulfur cluster binding (32.3%) lyase activity (17.7%)" "IPR004646 (50%) IPR051208 (50%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (50%) Class-I Fumarase/Tartrate Dehydratase (50%)" TLTLSGMLAEAIRR root 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (10.8%)" "GO:0005737 (11.1%) GO:0002189 (11.1%) GO:0005829 (0%)" "GO:0000287 (11.2%) GO:0004749 (11.2%) GO:0016301 (11.2%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (10.8%)" "cytoplasm (11.1%) ribose phosphate diphosphokinase complex (11.1%) cytosol (0%)" "magnesium ion binding (11.2%) ribose phosphate diphosphokinase activity (11.2%) kinase activity (11.2%)" "IPR005946 (17.1%) IPR029057 (17%) IPR000836 (16.9%)" "Ribose-phosphate pyrophosphokinase (17.1%) Phosphoribosyltransferase-like (17%) Phosphoribosyltransferase domain (16.9%)" SSLTEQINNLNAEVANLKEMATVGK VHTAILILR Pseudomonadati Bacteria Pseudomonadati 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (32.8%) GO:0006543 (32.8%)" GO:0016020 (0.5%) "GO:0004359 (32.8%) GO:0000155 (0.5%) GO:0016787 (0.5%)" "glutamate biosynthetic process (32.8%) L-glutamine catabolic process (32.8%)" membrane (0.5%) "glutaminase activity (32.8%) phosphorelay sensor kinase activity (0.5%) hydrolase activity (0.5%)" "IPR012338 (48.1%) IPR015868 (48.1%) IPR003594 (0.8%)" "Beta-lactamase/transpeptidase-like (48.1%) Glutaminase (48.1%) Histidine kinase/HSP90-like ATPase domain (0.8%)" GAPIVVAGGYGVGSK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.3.8.1 (100%) short-chain acyl-CoA dehydrogenase (100%) GO:0033539 (33.2%) "GO:0009055 (33.2%) GO:0050660 (33.2%) GO:0016937 (0.5%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (33.2%) "electron transfer activity (33.2%) flavin adenine dinucleotide binding (33.2%) short-chain fatty acyl-CoA dehydrogenase activity (0.5%)" "IPR001308 (16.6%) IPR014730 (16.6%) IPR014731 (16.6%)" "Electron transfer flavoprotein alpha subunit/FixB (16.6%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.6%) Electron transfer flavoprotein, alpha subunit, C-terminal (16.6%)" SCIDSGFSSVMIDGSHLPYEENIALTKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "4.1.2.- (50%) 4.1.2.13 (50%)" "Aldehyde-lyases (50%) fructose-bisphosphate aldolase (50%)" "GO:0006096 (25%) GO:0030388 (25%)" "GO:0004332 (25%) GO:0008270 (25%)" "glycolytic process (25%) fructose 1,6-bisphosphate metabolic process (25%)" "fructose-bisphosphate aldolase activity (25%) zinc ion binding (25%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" LANELSDAAENKGTAVK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (19.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0015935 (19.7%) GO:0005840 (0.7%) GO:0022627 (0.1%)" "GO:0003735 (19.8%) GO:0019843 (19.8%) GO:0000049 (19.6%)" "translation (19.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "small ribosomal subunit (19.7%) ribosome (0.7%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (19.8%) rRNA binding (19.8%) tRNA binding (19.6%)" "IPR023798 (20.1%) IPR036823 (20.1%) IPR000235 (20%)" "Small ribosomal subunit protein uS7 domain (20.1%) Small ribosomal subunit protein uS7 domain superfamily (20.1%) Small ribosomal subunit protein uS7 (20%)" GSPEGFVAPVTPGR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (20.1%) GO:0022625 (20.1%) "GO:0003735 (20.1%) GO:0019843 (20.1%) GO:0000049 (19.5%)" translation (20.1%) cytosolic large ribosomal subunit (20.1%) "structural constituent of ribosome (20.1%) rRNA binding (20.1%) tRNA binding (19.5%)" "IPR000114 (20%) IPR016180 (20%) IPR020798 (20%)" "Large ribosomal subunit protein uL16, bacteria (20%) Large ribosomal subunit protein uL16 domain (20%) Large ribosomal subunit protein uL16, conserved site (20%)" LAGLYPAGALIEIINEDGTMAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.5.4.25 (55.1%) 4.1.99.12 (44.9%)" "GTP cyclohydrolase II (55.1%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (44.9%)" GO:0009231 (13.4%) GO:0005829 (13.4%) "GO:0003935 (13.4%) GO:0008686 (13.4%) GO:0005525 (12.9%)" riboflavin biosynthetic process (13.4%) cytosol (13.4%) "GTP cyclohydrolase II activity (13.4%) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (13.4%) GTP binding (12.9%)" "IPR000422 (17.2%) IPR017945 (17.2%) IPR032677 (16.8%)" "3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB (17.2%) DHBP synthase RibB-like alpha/beta domain superfamily (17.2%) GTP cyclohydrolase II (16.8%)" AIFIVAGAPACMEELKAAGIENFIHVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" INLIGEHTDYNGGFVFPGAVDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20.1%) GO:0005829 (20.1%) "GO:0004335 (20.2%) GO:0005524 (20.1%) GO:0046872 (18.4%)" galactose metabolic process (20.1%) cytosol (20.1%) "galactokinase activity (20.2%) ATP binding (20.1%) metal ion binding (18.4%)" "IPR019539 (10.1%) IPR019741 (10.1%) IPR000705 (10%)" "Galactokinase, N-terminal domain (10.1%) Galactokinase, conserved site (10.1%) Galactokinase (10%)" IVTGDTPGTATEIAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "7.2.2.10 (98.3%) 3.6.3.8 (0.9%) 7.2.2.8 (0.9%)" "P-type Ca(2+) transporter (98.3%) Transferred entry: 7.2.2.10 (0.9%) P-type Cu(+) transporter (0.9%)" "GO:0006825 (0.2%) GO:0034220 (0.1%)" "GO:0005886 (19.8%) GO:0012505 (19.7%) GO:0016020 (0.1%)" "GO:0005388 (19.9%) GO:0005524 (19.9%) GO:0016887 (19.9%)" "copper ion transport (0.2%) monoatomic ion transmembrane transport (0.1%)" "plasma membrane (19.8%) endomembrane system (19.7%) membrane (0.1%)" "P-type calcium transporter activity (19.9%) ATP binding (19.9%) ATP hydrolysis activity (19.9%)" "IPR001757 (9.2%) IPR023298 (9.2%) IPR036412 (9.2%)" "P-type ATPase (9.2%) P-type ATPase, transmembrane domain superfamily (9.2%) HAD-like superfamily (9.2%)" SADFNKDYFTQIDIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae AAQLLNDLHVPFEMNALSAHR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.99.18 (94.1%) 4.1.1.21 (5.9%)" "5-(carboxyamino)imidazole ribonucleotide mutase (94.1%) phosphoribosylaminoimidazole carboxylase (5.9%)" GO:0006189 (30%) GO:0016020 (17.7%) "GO:0034023 (29.6%) GO:0016829 (22.2%) GO:0016853 (0.5%)" 'de novo' IMP biosynthetic process (30%) membrane (17.7%) "5-(carboxyamino)imidazole ribonucleotide mutase activity (29.6%) lyase activity (22.2%) isomerase activity (0.5%)" "IPR000031 (33.3%) IPR024694 (33.3%) IPR033747 (33.3%)" "PurE domain (33.3%) PurE, prokaryotic type (33.3%) Class I PurE (33.3%)" NAEKQAMEDNKSDIGWGSQIR root "GO:0075523 (0.7%) GO:0006415 (0.2%)" "GO:0005737 (49%) GO:0005829 (0.2%)" "GO:0016149 (48.4%) GO:0003747 (1.5%)" "viral translational frameshifting (0.7%) translational termination (0.2%)" "cytoplasm (49%) cytosol (0.2%)" "translation release factor activity, codon specific (48.4%) translation release factor activity (1.5%)" "IPR045853 (25.5%) IPR000352 (25.3%) IPR005139 (24.7%)" "Peptide chain release factor class I superfamily (25.5%) Peptide chain release factor class I (25.3%) Peptide chain release factor (24.7%)" GKVVDVLTPNYDVVTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0004019 (16.7%) GO:0005525 (16.7%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) adenylosuccinate synthase activity (16.7%) GTP binding (16.7%)" "IPR001114 (14.3%) IPR018220 (14.3%) IPR027417 (14.3%)" "Adenylosuccinate synthetase (14.3%) Adenylosuccinate synthase, GTP-binding site (14.3%) P-loop containing nucleoside triphosphate hydrolase (14.3%)" VINQLTGGLAGMAK root 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) "GO:0006103 (21.4%) GO:0006979 (20.2%) GO:0006090 (0.1%)" "GO:0005737 (13.8%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0004148 (21.6%) GO:0050660 (21.6%) GO:0016491 (0.2%)" "2-oxoglutarate metabolic process (21.4%) response to oxidative stress (20.2%) pyruvate metabolic process (0.1%)" "cytoplasm (13.8%) cytosol (0.1%) plasma membrane (0.1%)" "dihydrolipoyl dehydrogenase (NADH) activity (21.6%) flavin adenine dinucleotide binding (21.6%) oxidoreductase activity (0.2%)" "IPR036188 (12.8%) IPR050151 (12.8%) IPR023753 (12.8%)" "FAD/NAD(P)-binding domain superfamily (12.8%) Class-I pyridine nucleotide-disulfide oxidoreductase (12.8%) FAD/NAD(P)-binding domain (12.8%)" VGQATEHNYCGVNCGIMDQFASVFGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" GQIPVAEPTEEQQEAAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (1.3%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (1.3%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" LHYMNEWWK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.2%) GO:0006096 (14.2%) GO:0051156 (14.2%)" GO:0005829 (14.2%) "GO:0004347 (14.2%) GO:0048029 (14.2%) GO:0097367 (14.2%)" "gluconeogenesis (14.2%) glycolytic process (14.2%) glucose 6-phosphate metabolic process (14.2%)" cytosol (14.2%) "glucose-6-phosphate isomerase activity (14.2%) monosaccharide binding (14.2%) carbohydrate derivative binding (14.2%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" NIPQISHISGHMGSTGFDPEVVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.1.46 (100%) 6-aminohexanoate-oligomer exohydrolase (100%) GO:0005975 (44.2%) "GO:0046872 (44.2%) GO:0016787 (9.3%) GO:0019875 (2.3%)" carbohydrate metabolic process (44.2%) "metal ion binding (44.2%) hydrolase activity (9.3%) 6-aminohexanoate-dimer hydrolase activity (2.3%)" "IPR001466 (20%) IPR006879 (20%) IPR011330 (20%)" "Beta-lactamase-related (20%) Carbohydrate deacetylase YdjC-like (20%) Glycoside hydrolase/deacetylase, beta/alpha-barrel (20%)" TEGNYVVVNYSAEPATSDELDR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" AKDEADEKDAIATVNKQEDANFSNNAMAEAFK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006412 (24.6%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0022627 (24.5%) GO:0005840 (0.7%) GO:1990904 (0.2%)" "GO:0003729 (24.6%) GO:0003735 (24.6%) GO:0003676 (0.1%)" "translation (24.6%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (24.5%) ribosome (0.7%) ribonucleoprotein complex (0.2%)" "mRNA binding (24.6%) structural constituent of ribosome (24.6%) nucleic acid binding (0.1%)" "IPR012340 (20.2%) IPR003029 (20.2%) IPR050437 (20.1%)" "Nucleic acid-binding, OB-fold (20.2%) S1 domain (20.2%) Small ribosomal subunit protein bS1-like (20.1%)" DLVESAPAALKEGVSKDDAEALKK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006412 (24.7%) GO:0002181 (0%) GO:0006351 (0%)" "GO:0022625 (24.7%) GO:0005840 (0.4%) GO:0005829 (0.1%)" "GO:0003735 (24.7%) GO:0003729 (24.7%) GO:0003677 (0%)" "translation (24.7%) cytoplasmic translation (0%) DNA-templated transcription (0%)" "cytosolic large ribosomal subunit (24.7%) ribosome (0.4%) cytosol (0.1%)" "structural constituent of ribosome (24.7%) mRNA binding (24.7%) DNA binding (0%)" "IPR000206 (19.9%) IPR013823 (19.9%) IPR014719 (19.9%)" "Large ribosomal subunit protein bL12 (19.9%) Large ribosomal subunit protein bL12, C-terminal (19.9%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (19.9%)" ALQDAGLSTSDIDDVLLVGGSTR Bacteria Bacteria "GO:0005524 (33.3%) GO:0051082 (33.3%) GO:0140662 (33.3%)" "ATP binding (33.3%) unfolded protein binding (33.3%) ATP-dependent protein folding chaperone (33.3%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" VECNQGRPQVTYK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0032790 (20.1%) GO:0005737 (19.4%) "GO:0003746 (20.1%) GO:0003924 (20.1%) GO:0005525 (20.1%)" ribosome disassembly (20.1%) cytoplasm (19.4%) "translation elongation factor activity (20.1%) GTPase activity (20.1%) GTP binding (20.1%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" SAIELNIPFVSAIMQSVSGPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (25%) GO:0006183 (25%)" "GO:0003938 (25%) GO:0046872 (25%)" "GMP biosynthetic process (25%) GTP biosynthetic process (25%)" "IMP dehydrogenase activity (25%) metal ion binding (25%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" IIQNQTPDDAFIFWNDDPIIQR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.2.9 (100%) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase (100%) "GO:0008360 (14.5%) GO:0009252 (14.5%) GO:0051301 (14.5%)" GO:0005737 (14.5%) "GO:0005524 (14.5%) GO:0008764 (14.5%)" "regulation of cell shape (14.5%) peptidoglycan biosynthetic process (14.5%) cell division (14.5%)" cytoplasm (14.5%) "ATP binding (14.5%) UDP-N-acetylmuramoylalanine-D-glutamate ligase activity (14.5%)" "IPR004101 (20%) IPR005762 (20%) IPR013221 (20%)" "Mur ligase, C-terminal (20%) UDP-N-acetylmuramoylalanine-D-glutamate ligase MurD (20%) Mur ligase, central (20%)" VGFKPAGGINTVNDALIYYTIVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (24.6%) GO:0016052 (24.6%)" GO:0005737 (24.6%) "GO:0004139 (24.6%) GO:0016829 (1.4%)" "deoxyribonucleotide catabolic process (24.6%) carbohydrate catabolic process (24.6%)" cytoplasm (24.6%) "deoxyribose-phosphate aldolase activity (24.6%) lyase activity (1.4%)" "IPR002915 (33.3%) IPR011343 (33.3%) IPR013785 (33.3%)" "DeoC/FbaB/LacD aldolase (33.3%) Deoxyribose-phosphate aldolase (33.3%) Aldolase-type TIM barrel (33.3%)" VALVPTMGNLHDGHMK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 6.3.2.1 (100%) pantoate--beta-alanine ligase (AMP-forming) (100%) GO:0015940 (24.9%) GO:0005829 (24.9%) "GO:0004592 (24.9%) GO:0005524 (24.9%) GO:0016874 (0.3%)" pantothenate biosynthetic process (24.9%) cytosol (24.9%) "pantoate-beta-alanine ligase activity (24.9%) ATP binding (24.9%) ligase activity (0.3%)" "IPR003721 (26.3%) IPR014729 (26.3%) IPR042176 (25.9%)" "Pantoate-beta-alanine ligase (26.3%) Rossmann-like alpha/beta/alpha sandwich fold (26.3%) Pantoate-beta-alanine ligase, C-terminal domain (25.9%)" QVVADKAASVGMPYVIER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" KQVFDAELTPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" NFIFSSSATVYGDQPK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "5.1.3.2 (99.7%) 5.1.3.7 (0.3%)" "UDP-glucose 4-epimerase (99.7%) UDP-N-acetylglucosamine 4-epimerase (0.3%)" "GO:0006012 (32.7%) GO:0005996 (0.2%) GO:0005975 (0.1%)" "GO:0005829 (32.8%) GO:0005737 (0.1%)" "GO:0003978 (32.8%) GO:0016853 (0.6%) GO:0016857 (0.1%)" "galactose metabolic process (32.7%) monosaccharide metabolic process (0.2%) carbohydrate metabolic process (0.1%)" "cytosol (32.8%) cytoplasm (0.1%)" "UDP-glucose 4-epimerase activity (32.8%) isomerase activity (0.6%) racemase and epimerase activity, acting on carbohydrates and derivatives (0.1%)" "IPR036291 (33.7%) IPR005886 (32.6%) IPR001509 (27.4%)" "NAD(P)-binding domain superfamily (33.7%) UDP-glucose 4-epimerase (32.6%) NAD-dependent epimerase/dehydratase (27.4%)" GTSVVEFVSTCSSGWK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae "1.2.-.- (25%) 1.2.7.1 (25%) 1.2.7.11 (25%)" "Acting on the aldehyde or oxo group of donors (25%) pyruvate synthase (25%) 2-oxoacid oxidoreductase (ferredoxin) (25%)" GO:0044281 (32.1%) "GO:0030976 (33.9%) GO:0016625 (32.1%) GO:0019164 (1.8%)" small molecule metabolic process (32.1%) "thiamine pyrophosphate binding (33.9%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (32.1%) pyruvate synthase activity (1.8%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" LVVITYHSLEDR root "2.1.1.199 (99.6%) 2.1.1.- (0.4%)" "16S rRNA (cytosine(1402)-N(4))-methyltransferase (99.6%) Methyltransferases (0.4%)" "GO:0070475 (33.3%) GO:0032259 (0.1%)" GO:0005737 (33.2%) "GO:0071424 (33.3%) GO:0008168 (0.1%)" "rRNA base methylation (33.3%) methylation (0.1%)" cytoplasm (33.2%) "rRNA (cytosine-N4-)-methyltransferase activity (33.3%) methyltransferase activity (0.1%)" "IPR002903 (33.4%) IPR029063 (33.4%) IPR023397 (33.3%)" "Ribosomal RNA small subunit methyltransferase H (33.4%) S-adenosyl-L-methionine-dependent methyltransferase superfamily (33.4%) S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily (33.3%)" FATHGGYILQGK root "1.1.1.1 (68.4%) 1.2.1.10 (31.6%)" "alcohol dehydrogenase (68.4%) acetaldehyde dehydrogenase (acetylating) (31.6%)" "GO:0015976 (18.5%) GO:0006066 (18.3%) GO:0006115 (0.1%)" "GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0046872 (19.5%) GO:0008774 (19.2%) GO:0004022 (16%)" "carbon utilization (18.5%) alcohol metabolic process (18.3%) ethanol biosynthetic process (0.1%)" "cytosol (0.1%) membrane (0.1%)" "metal ion binding (19.5%) acetaldehyde dehydrogenase (acetylating) activity (19.2%) alcohol dehydrogenase (NAD+) activity (16%)" "IPR016161 (10.6%) IPR016163 (10.6%) IPR015590 (10.1%)" "Aldehyde/histidinol dehydrogenase (10.6%) Aldehyde dehydrogenase, C-terminal (10.6%) Aldehyde dehydrogenase domain (10.1%)" YYTNADFMSIVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" LLASGDSEKPEIIKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (8.3%) GO:0030388 (8.3%) GO:0061621 (8.3%)" GO:0005945 (8.3%) "GO:0003872 (8.3%) GO:0005524 (8.3%) GO:0016208 (8.3%)" "fructose 6-phosphate metabolic process (8.3%) fructose 1,6-bisphosphate metabolic process (8.3%) canonical glycolysis (8.3%)" 6-phosphofructokinase complex (8.3%) "6-phosphofructokinase activity (8.3%) ATP binding (8.3%) AMP binding (8.3%)" "IPR000023 (20%) IPR012003 (20%) IPR012829 (20%)" "Phosphofructokinase domain (20%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (20%) Phosphofructokinase, mixed-substrate PFK group III (20%)" IKYNLTIGDELPSGIMQLAK Candidatus Coprenecus avistercoris Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Rikenellaceae Candidatus Coprenecus Candidatus Coprenecus avistercoris 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.7%) IPR007121 (7.7%) IPR007641 (7.7%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.7%) RNA polymerase, beta subunit, conserved site (7.7%) RNA polymerase Rpb2, domain 7 (7.7%)" CFYALEQER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (21.9%) GO:0046034 (3.3%)" "GO:0005524 (25.2%) GO:0046961 (25.2%) GO:0046933 (21.9%)" "proton motive force-driven plasma membrane ATP synthesis (21.9%) ATP metabolic process (3.3%)" "ATP binding (25.2%) proton-transporting ATPase activity, rotational mechanism (25.2%) proton-transporting ATP synthase activity, rotational mechanism (21.9%)" "IPR000194 (14%) IPR020003 (14%) IPR022878 (14%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (14%) V-type ATP synthase catalytic alpha chain (14%)" GPQTGFTVSHSHIR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001383 (20%) IPR026569 (20%) IPR034704 (20%)" "Large ribosomal subunit protein bL28, bacteria (20%) Large ribosomal subunit protein bL28 (20%) Large ribosomal subunit protein bL28/bL31-like superfamily (20%)" ALINFFLDENIK Odoribacter splanchnicus Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacter Odoribacter splanchnicus 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (25%) GO:0005737 (25%) "GO:0004828 (25%) GO:0005524 (25%)" seryl-tRNA aminoacylation (25%) cytoplasm (25%) "serine-tRNA ligase activity (25%) ATP binding (25%)" "IPR002314 (12.5%) IPR002317 (12.5%) IPR006195 (12.5%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (12.5%) Serine-tRNA ligase, type1 (12.5%) Aminoacyl-tRNA synthetase, class II (12.5%)" DFVLEADRIEFKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR025347 (100%) Protein of unknown function DUF4251 (100%) GFANKYPVEGYALDAAQLTASGVQPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.2.1.- (85.7%) 3.2.1.49 (14.3%)" "Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (85.7%) alpha-N-acetylgalactosaminidase (14.3%)" "GO:0000166 (50%) GO:0016798 (48.3%) GO:0008456 (1.7%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (48.3%) alpha-N-acetylgalactosaminidase activity (1.7%)" "IPR000683 (25%) IPR036291 (25%) IPR049303 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) NAD(P)-binding domain superfamily (25%) Glycosyl hydrolase 109, C-terminal domain (25%)" VINLDKDSEPDIYNAIKR Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.4%) GO:0005829 (17.4%) "GO:0004612 (17.4%) GO:0005524 (17.4%) GO:0046872 (17.2%)" gluconeogenesis (17.4%) cytosol (17.4%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.4%) ATP binding (17.4%) metal ion binding (17.2%)" "IPR001272 (25.1%) IPR015994 (25.1%) IPR008210 (24.9%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.1%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (25.1%) Phosphoenolpyruvate carboxykinase, N-terminal (24.9%)" SAQLVAASLAGLIALLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0001678 (13.1%) GO:0006006 (13.1%) GO:0006096 (13.1%)" GO:0005829 (8.5%) "GO:0004340 (13.1%) GO:0005524 (13.1%) GO:0005536 (13.1%)" "intracellular glucose homeostasis (13.1%) glucose metabolic process (13.1%) glycolytic process (13.1%)" cytosol (8.5%) "glucokinase activity (13.1%) ATP binding (13.1%) D-glucose binding (13.1%)" "IPR001312 (25%) IPR022672 (25%) IPR022673 (25%)" "Hexokinase (25%) Hexokinase, N-terminal (25%) Hexokinase, C-terminal (25%)" YGVLMTDGPLAGLLAR Bacteria Bacteria 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" VTVENSEACPR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0009328 (16.7%) "GO:0000049 (16.7%) GO:0004826 (16.7%) GO:0000287 (16.5%)" phenylalanyl-tRNA aminoacylation (16.7%) phenylalanine-tRNA ligase complex (16.7%) "tRNA binding (16.7%) phenylalanine-tRNA ligase activity (16.7%) magnesium ion binding (16.5%)" "IPR002547 (7.8%) IPR005146 (7.8%) IPR012340 (7.8%)" "tRNA-binding domain (7.8%) B3/B4 tRNA-binding domain (7.8%) Nucleic acid-binding, OB-fold (7.8%)" LSYGSLNPIKLPDTK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium "IPR023296 (66.7%) IPR018337 (33.3%)" "Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (66.7%) Cell wall/choline-binding repeat (33.3%)" STNNDELLYDEDDSVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis ELVLGVVSHNFRPEFINR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0034605 (17.9%) GO:0042026 (14.2%) GO:0006508 (0.1%)" "GO:0005829 (13.5%) GO:0005737 (4.5%) GO:0016020 (0.1%)" "GO:0005524 (17.9%) GO:0016887 (17.9%) GO:0042802 (13.5%)" "cellular response to heat (17.9%) protein refolding (14.2%) proteolysis (0.1%)" "cytosol (13.5%) cytoplasm (4.5%) membrane (0.1%)" "ATP binding (17.9%) ATP hydrolysis activity (17.9%) identical protein binding (13.5%)" "IPR027417 (9.3%) IPR050130 (9.3%) IPR003959 (9.1%)" "P-loop containing nucleoside triphosphate hydrolase (9.3%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (9.3%) ATPase, AAA-type, core (9.1%)" TKNNPILIGEPGTGK root "GO:0034605 (20%) GO:0042026 (15.4%) GO:0006508 (2.1%)" "GO:0005737 (20%) GO:0005829 (0%)" "GO:0005524 (20%) GO:0016887 (20%) GO:0008233 (2.1%)" "cellular response to heat (20%) protein refolding (15.4%) proteolysis (2.1%)" "cytoplasm (20%) cytosol (0%)" "ATP binding (20%) ATP hydrolysis activity (20%) peptidase activity (2.1%)" "IPR050130 (8.5%) IPR003593 (8.5%) IPR003959 (8.5%)" "ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.5%) AAA+ ATPase domain (8.5%) ATPase, AAA-type, core (8.5%)" IEALAEDFSDKHHALFLGR root 2.6.1.16 (100%) glutamine--fructose-6-phosphate transaminase (isomerizing) (100%) "GO:0006002 (12.6%) GO:0006487 (12.6%) GO:0006047 (12.6%)" GO:0005829 (12.6%) "GO:0004360 (12.6%) GO:0097367 (12.6%) GO:0008483 (0.1%)" "fructose 6-phosphate metabolic process (12.6%) protein N-linked glycosylation (12.6%) UDP-N-acetylglucosamine metabolic process (12.6%)" cytosol (12.6%) "glutamine-fructose-6-phosphate transaminase (isomerizing) activity (12.6%) carbohydrate derivative binding (12.6%) transaminase activity (0.1%)" "IPR046348 (12.7%) IPR001347 (12.7%) IPR035466 (12.7%)" "SIS domain superfamily (12.7%) SIS domain (12.7%) GlmS/AgaS, SIS domain 1 (12.7%)" NNAGEVNIHFTVSPEHQALFEQLVADKSGEYEEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" DAHPGSTVTILTMGPGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0009055 (100%) electron transfer activity (100%) "IPR012255 (20.3%) IPR014729 (20.3%) IPR014730 (20.3%)" "Electron transfer flavoprotein, beta subunit (20.3%) Rossmann-like alpha/beta/alpha sandwich fold (20.3%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (20.3%)" VYAGNEHNHAAQQPQVLDI Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0017148 (19.9%) GO:0006412 (19.8%) GO:0002181 (0%)" "GO:0022625 (19.9%) GO:0005840 (0.5%) GO:0005737 (0%)" "GO:0003729 (19.9%) GO:0003735 (19.9%) GO:0008270 (0%)" "negative regulation of translation (19.9%) translation (19.8%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (19.9%) ribosome (0.5%) cytoplasm (0%)" "mRNA binding (19.9%) structural constituent of ribosome (19.9%) zinc ion binding (0%)" "IPR005822 (25%) IPR036899 (25%) IPR005823 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13 superfamily (25%) Large ribosomal subunit protein uL13, bacteria (25%)" MDNDAFTSFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.4.24.55 (66.7%) 3.4.24.- (33.3%)" "pitrilysin (66.7%) Metalloendopeptidases (33.3%)" GO:0006508 (33.7%) "GO:0004222 (33.7%) GO:0046872 (32.6%)" proteolysis (33.7%) "metalloendopeptidase activity (33.7%) metal ion binding (32.6%)" "IPR001431 (20.1%) IPR007863 (20.1%) IPR011765 (20.1%)" "Peptidase M16, zinc-binding site (20.1%) Peptidase M16, C-terminal (20.1%) Peptidase M16, N-terminal (20.1%)" QQELLQPIQQK root "GO:0050821 (27.3%) GO:0016567 (4.5%)" "GO:0005829 (27.3%) GO:0030014 (4.5%)" "GO:0051082 (27.3%) GO:0003723 (4.5%) GO:0004842 (4.5%)" "protein stabilization (27.3%) protein ubiquitination (4.5%)" "cytosol (27.3%) CCR4-NOT complex (4.5%)" "unfolded protein binding (27.3%) RNA binding (4.5%) ubiquitin-protein transferase activity (4.5%)" "IPR005632 (40%) IPR024930 (40%) IPR000504 (6.7%)" "Chaperone protein Skp (40%) Skp domain superfamily (40%) RNA recognition motif domain (6.7%)" SCPEVMEVLAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (47.4%) GO:0003824 (26.3%) GO:0016874 (21.1%)" "ATP binding (47.4%) catalytic activity (26.3%) ligase activity (21.1%)" "IPR003781 (19.6%) IPR013815 (19.6%) IPR016102 (19.6%)" "CoA-binding (19.6%) ATP-grasp fold, subdomain 1 (19.6%) Succinyl-CoA synthetase-like (19.6%)" LNLVNGGGDAYNKGDYADALK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) NVISALQSGGNTIHGVLK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (2.1%) "GO:0005840 (48.3%) GO:1990904 (47.1%) GO:0022625 (0.4%)" "GO:0070180 (1.7%) GO:0003735 (0.4%)" translation (2.1%) "ribosome (48.3%) ribonucleoprotein complex (47.1%) cytosolic large ribosomal subunit (0.4%)" "large ribosomal subunit rRNA binding (1.7%) structural constituent of ribosome (0.4%)" "IPR043141 (33.3%) IPR001790 (32.8%) IPR047865 (32.8%)" "Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10 (32.8%) Large ribosomal subunit protein uL10, bacteria/organella (32.8%)" VSFDTPEYTANADGLGVLR Bacteroidota Bacteria Pseudomonadati Bacteroidota 4.2.1.47 (100%) GDP-mannose 4,6-dehydratase (100%) GO:0042351 (33.3%) "GO:0008446 (33.3%) GO:0070401 (33.3%)" 'de novo' GDP-L-fucose biosynthetic process (33.3%) "GDP-mannose 4,6-dehydratase activity (33.3%) NADP+ binding (33.3%)" "IPR006368 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "GDP-mannose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" MDEDVPLVVPEVNPEDALNRPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000534 (19.4%) IPR005986 (19.4%) IPR012080 (19.4%)" "Semialdehyde dehydrogenase, NAD-binding (19.4%) Aspartate-semialdehyde dehydrogenase, beta-type (19.4%) Aspartate-semialdehyde dehydrogenase (19.4%)" EYKGSLVGESNYQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (31.9%) "GO:0004476 (34%) GO:0008270 (34%)" carbohydrate metabolic process (31.9%) "mannose-6-phosphate isomerase activity (34%) zinc ion binding (34%)" "IPR011051 (17.2%) IPR014710 (17.2%) IPR046457 (17.2%)" "RmlC-like cupin domain superfamily (17.2%) RmlC-like jelly roll fold (17.2%) Phosphomannose isomerase type I, catalytic domain (17.2%)" WNPSMAPYIFMER Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (32.8%) "GO:0022627 (32.8%) GO:0005840 (1.5%)" GO:0003735 (32.8%) translation (32.8%) "cytosolic small ribosomal subunit (32.8%) ribosome (1.5%)" structural constituent of ribosome (32.8%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" NLPLWHIPIELR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.99.5 (96.7%) 2.5.1.55 (3.3%)" "chorismate mutase (96.7%) 3-deoxy-8-phosphooctulonate synthase (3.3%)" GO:0046417 (46.8%) "GO:0004106 (46.8%) GO:0003849 (3.2%) GO:0008676 (1.6%)" chorismate metabolic process (46.8%) "chorismate mutase activity (46.8%) 3-deoxy-7-phosphoheptulonate synthase activity (3.2%) 3-deoxy-8-phosphooctulonate synthase activity (1.6%)" "IPR002701 (16.7%) IPR006218 (16.7%) IPR013785 (16.7%)" "Chorismate mutase II, prokaryotic-type (16.7%) DAHP synthetase I/KDSA (16.7%) Aldolase-type TIM barrel (16.7%)" EAIDHLIAKGEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "1.2.7.1 (80%) 1.2.7.- (20%)" "pyruvate synthase (80%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (12.8%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (12.8%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" NATGSIIESTLDKGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (9.1%) IPR000795 (9.1%) IPR005225 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translational (tr)-type GTP-binding domain (9.1%) Small GTP-binding domain (9.1%)" LIAEMPFGTSTQEPGEKQFAPLEER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0034599 (33.3%) GO:0005737 (33.3%) GO:0016491 (33.3%) cellular response to oxidative stress (33.3%) cytoplasm (33.3%) oxidoreductase activity (33.3%) "IPR000415 (33.3%) IPR029479 (33.3%) IPR033877 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase Frm2/Hbn1-like (33.3%)" DSTPMFVYGVNHTSYAGQDIISNASCTTNCLAPIAK Pseudomonadati Bacteria Pseudomonadati "1.2.1.- (93.8%) 1.2.1.12 (6.3%)" "With NAD(+) or NADP(+) as acceptor (93.8%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (6.3%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (11.1%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (11.1%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" QLAGVSEEER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" AIGTPAHIYFKNESVSPMGSHK Pseudomonadati Bacteria Pseudomonadati 4.2.1.20 (100%) tryptophan synthase (100%) "GO:0005737 (24.6%) GO:0016020 (1.8%)" "GO:0004834 (24.6%) GO:0052684 (24.6%) GO:0030170 (24.3%)" "cytoplasm (24.6%) membrane (1.8%)" "tryptophan synthase activity (24.6%) L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity (24.6%) pyridoxal phosphate binding (24.3%)" "IPR001926 (20.1%) IPR006653 (20.1%) IPR023026 (20.1%)" "Tryptophan synthase beta chain-like, PALP domain (20.1%) Tryptophan synthase, beta chain, conserved site (20.1%) Tryptophan synthase beta chain/beta chain-like (20.1%)" STAKGDHMTVDVCSK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (16.7%) "GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16.7%) GO:0046872 (16.7%)" translation (16.7%) "ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%) metal ion binding (16.7%)" "IPR002150 (25%) IPR027491 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL31 type A/B (25%) Large ribosomal subunit protein bL31 type A (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" FNKEAASHPDTVVLAVSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" LASAFIEAFCEMSEKDIQIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "6.3.5.5 (94.4%) 6.3.4.16 (5.6%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (94.4%) carbamoyl-phosphate synthase (ammonia) (5.6%)" "GO:0006221 (13.4%) GO:0006526 (13.4%) GO:0006541 (13.4%)" GO:0005737 (13.4%) "GO:0004088 (13.4%) GO:0005524 (13.4%) GO:0046872 (13.4%)" "pyrimidine nucleotide biosynthetic process (13.4%) L-arginine biosynthetic process (13.4%) glutamine metabolic process (13.4%)" cytoplasm (13.4%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.4%) ATP binding (13.4%) metal ion binding (13.4%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" IFINYGMLTQEDFYEKANK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (2.5%) "GO:0005524 (23.3%) GO:0016887 (23.3%) GO:0051082 (23.3%)" cytoplasm (2.5%) "ATP binding (23.3%) ATP hydrolysis activity (23.3%) unfolded protein binding (23.3%)" "IPR001404 (20.3%) IPR020568 (20.3%) IPR019805 (19.6%)" "Heat shock protein Hsp90 family (20.3%) Ribosomal protein uS5 domain 2-type superfamily (20.3%) Heat shock protein Hsp90, conserved site (19.6%)" GLAEDATDEEKAAAKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" DMQGDPTVVYEHIKDVLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.1.1.133 (83.3%) 2.1.1.- (16.7%)" "precorrin-4 C(11)-methyltransferase (83.3%) Methyltransferases (16.7%)" "GO:0009236 (33.3%) GO:0032259 (33.3%)" GO:0046026 (33.3%) "cobalamin biosynthetic process (33.3%) methylation (33.3%)" precorrin-4 C11-methyltransferase activity (33.3%) "IPR000878 (8.3%) IPR002750 (8.3%) IPR003043 (8.3%)" "Tetrapyrrole methylase (8.3%) CobE/GbiG C-terminal domain (8.3%) Uroporphiryn-III C-methyltransferase, conserved site (8.3%)" HVLCEKPFASNAK Bacteria Bacteria "1.1.1.292 (66.7%) 1.1.1.371 (33.3%)" "1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming) (66.7%) scyllo-inositol 2-dehydrogenase (NADP(+)) (33.3%)" "GO:0000166 (87.5%) GO:0033712 (12.5%)" "nucleotide binding (87.5%) 1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming) activity (12.5%)" "IPR000683 (33.3%) IPR036291 (33.3%) IPR055170 (33.3%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (33.3%) NAD(P)-binding domain superfamily (33.3%) GFO/IDH/MocA-like oxidoreductase domain (33.3%)" VIAGMAGTTYGTDKQQDIAMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR002318 (9.1%) IPR003156 (9.1%) IPR009000 (9.1%)" "Alanine-tRNA ligase, class IIc (9.1%) DHHA1 domain (9.1%) Translation protein, beta-barrel domain superfamily (9.1%)" GTDIVLYIDDDCKEFLEESR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (17.3%) "GO:0005524 (19.2%) GO:0016887 (19.2%) GO:0051082 (19.2%)" cytoplasm (17.3%) "ATP binding (19.2%) ATP hydrolysis activity (19.2%) unfolded protein binding (19.2%)" "IPR001404 (16.8%) IPR019805 (16.8%) IPR020568 (16.8%)" "Heat shock protein Hsp90 family (16.8%) Heat shock protein Hsp90, conserved site (16.8%) Ribosomal protein uS5 domain 2-type superfamily (16.8%)" LVGHWGTTPGLNFLIGHINR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae "4.1.2.- (67%) 4.1.2.22 (21.4%) 4.1.2.9 (11.7%)" "Aldehyde-lyases (67%) fructose-6-phosphate phosphoketolase (21.4%) phosphoketolase (11.7%)" GO:0005975 (32.5%) "GO:0000287 (32.3%) GO:0016832 (27.8%) GO:0047905 (4.6%)" carbohydrate metabolic process (32.5%) "magnesium ion binding (32.3%) aldehyde-lyase activity (27.8%) fructose-6-phosphate phosphoketolase activity (4.6%)" "IPR005593 (13.6%) IPR018970 (13.6%) IPR019790 (13.6%)" "Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase (13.6%) Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal (13.6%) Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site (13.6%)" SYAHLCALRDEVIAMGVLPPVSEWNK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (34.1%) "GO:0016615 (31.8%) GO:0016616 (31.8%) GO:0030060 (2.3%)" malate metabolic process (34.1%) "malate dehydrogenase activity (31.8%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (31.8%) L-malate dehydrogenase (NAD+) activity (2.3%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" TQVVVLGAGPAGYSAAFR root "1.8.1.4 (99.8%) 1.-.-.- (0.1%) 1.8.1.7 (0.1%)" "dihydrolipoyl dehydrogenase (99.8%) Oxidoreductases (0.1%) glutathione-disulfide reductase (0.1%)" "GO:0006103 (21.4%) GO:0006979 (20.3%) GO:0006090 (0%)" "GO:0005737 (14.9%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0004148 (21.5%) GO:0050660 (21.4%) GO:0016491 (0.2%)" "2-oxoglutarate metabolic process (21.4%) response to oxidative stress (20.3%) pyruvate metabolic process (0%)" "cytoplasm (14.9%) cytosol (0%) plasma membrane (0%)" "dihydrolipoyl dehydrogenase (NADH) activity (21.5%) flavin adenine dinucleotide binding (21.4%) oxidoreductase activity (0.2%)" "IPR036188 (12.8%) IPR050151 (12.8%) IPR023753 (12.7%)" "FAD/NAD(P)-binding domain superfamily (12.8%) Class-I pyridine nucleotide-disulfide oxidoreductase (12.8%) FAD/NAD(P)-binding domain (12.7%)" QALLALVLNR root 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006520 (16.6%) GO:0044205 (16.6%) GO:0006207 (16.4%)" "GO:0005829 (16.6%) GO:0005737 (0.1%) GO:0009347 (0.1%)" "GO:0004070 (16.6%) GO:0016597 (16.6%) GO:0016740 (0.3%)" "amino acid metabolic process (16.6%) 'de novo' UMP biosynthetic process (16.6%) 'de novo' pyrimidine nucleobase biosynthetic process (16.4%)" "cytosol (16.6%) cytoplasm (0.1%) aspartate carbamoyltransferase complex (0.1%)" "aspartate carbamoyltransferase activity (16.6%) amino acid binding (16.6%) transferase activity (0.3%)" "IPR006131 (20.2%) IPR036901 (20.2%) IPR006130 (20.1%)" "Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20.2%) Aspartate/ornithine carbamoyltransferase superfamily (20.2%) Aspartate/ornithine carbamoyltransferase (20.1%)" TEIPDEDRDFYLER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (12%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (12%)" "IPR003953 (14.7%) IPR027477 (14.7%) IPR030664 (14.7%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.7%) Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily (14.7%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (14.7%)" KNTAFEIFYSALETVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (20%) GO:0015935 (20%) "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) small ribosomal subunit (20%) "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" GIIIKPIVTEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (20.3%) GO:0032543 (0.1%)" "GO:0005840 (20.3%) GO:1990904 (20.2%) GO:0005762 (0.1%)" "GO:0003735 (20.5%) GO:0019843 (18.2%)" "translation (20.3%) mitochondrial translation (0.1%)" "ribosome (20.3%) ribonucleoprotein complex (20.2%) mitochondrial large ribosomal subunit (0.1%)" "structural constituent of ribosome (20.5%) rRNA binding (18.2%)" "IPR012677 (31.6%) IPR012678 (31.6%) IPR013025 (31.6%)" "Nucleotide-binding alpha-beta plait domain superfamily (31.6%) Ribosomal protein uL23/eL15/eS24 core domain superfamily (31.6%) Large ribosomal subunit protein uL23-like (31.6%)" NLPLWHIPIELRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.99.5 (96.7%) 2.5.1.55 (3.3%)" "chorismate mutase (96.7%) 3-deoxy-8-phosphooctulonate synthase (3.3%)" GO:0046417 (46.8%) "GO:0004106 (46.8%) GO:0003849 (3.2%) GO:0008676 (1.6%)" chorismate metabolic process (46.8%) "chorismate mutase activity (46.8%) 3-deoxy-7-phosphoheptulonate synthase activity (3.2%) 3-deoxy-8-phosphooctulonate synthase activity (1.6%)" "IPR002701 (16.7%) IPR006218 (16.7%) IPR013785 (16.7%)" "Chorismate mutase II, prokaryotic-type (16.7%) DAHP synthetase I/KDSA (16.7%) Aldolase-type TIM barrel (16.7%)" VKPVSVNHESSTSNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0046677 (25%) "GO:0005886 (25%) GO:0030313 (25%)" "GO:0015562 (23.6%) GO:0022857 (1.4%)" response to antibiotic (25%) "plasma membrane (25%) cell envelope (25%)" "efflux transmembrane transporter activity (23.6%) transmembrane transporter activity (1.4%)" "IPR006143 (25.7%) IPR032317 (25.7%) IPR051160 (25.7%)" "RND efflux pump, membrane fusion protein (25.7%) Unknown (25.7%) Unknown (25.7%)" HIGLYSYTYDALKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.7.7.38 (100%) 3-deoxy-manno-octulosonate cytidylyltransferase (100%) GO:0009103 (33.3%) GO:0005829 (33.3%) GO:0008690 (33.3%) lipopolysaccharide biosynthetic process (33.3%) cytosol (33.3%) 3-deoxy-manno-octulosonate cytidylyltransferase activity (33.3%) "IPR003329 (33.3%) IPR004528 (33.3%) IPR029044 (33.3%)" "Acylneuraminate cytidylyltransferase (33.3%) 3-deoxy-D-manno-octulosonate cytidylyltransferase (33.3%) Nucleotide-diphospho-sugar transferases (33.3%)" VASLPAAAMPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.16.1.1 (100%) mercury(II) reductase (100%) "GO:0003955 (30.2%) GO:0016668 (30.2%) GO:0050660 (30.2%)" "NAD(P)H dehydrogenase (quinone) activity (30.2%) oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (30.2%) flavin adenine dinucleotide binding (30.2%)" "IPR001100 (16.7%) IPR004099 (16.7%) IPR012999 (16.7%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (16.7%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (16.7%) Pyridine nucleotide-disulphide oxidoreductase, class I, active site (16.7%)" DGDRDFWMTAEEAKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.21.92 (100%) endopeptidase Clp (100%) GO:0006515 (16.7%) "GO:0005737 (16.7%) GO:0009368 (16.7%)" "GO:0004176 (16.7%) GO:0004252 (16.7%) GO:0051117 (16.7%)" protein quality control for misfolded or incompletely synthesized proteins (16.7%) "cytoplasm (16.7%) endopeptidase Clp complex (16.7%)" "ATP-dependent peptidase activity (16.7%) serine-type endopeptidase activity (16.7%) ATPase binding (16.7%)" "IPR001907 (33.3%) IPR023562 (33.3%) IPR029045 (33.3%)" "ATP-dependent Clp protease proteolytic subunit (33.3%) Clp protease proteolytic subunit /Translocation-enhancing protein TepA (33.3%) ClpP/crotonase-like domain superfamily (33.3%)" WLEWDESSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" AMIGNNVSHSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (24.9%) "GO:0005840 (25.2%) GO:1990904 (24.9%)" GO:0003735 (24.9%) translation (24.9%) "ribosome (25.2%) ribonucleoprotein complex (24.9%)" structural constituent of ribosome (24.9%) "IPR001383 (25%) IPR026569 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL28, bacteria (25%) Large ribosomal subunit protein bL28 (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" AIDTPAHIYFK Bacteria Bacteria 4.2.1.20 (100%) tryptophan synthase (100%) GO:0005737 (25.2%) "GO:0004834 (25.2%) GO:0052684 (25.2%) GO:0030170 (24.3%)" cytoplasm (25.2%) "tryptophan synthase activity (25.2%) L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity (25.2%) pyridoxal phosphate binding (24.3%)" "IPR023026 (20.8%) IPR001926 (20.6%) IPR036052 (20.6%)" "Tryptophan synthase beta chain/beta chain-like (20.8%) Tryptophan synthase beta chain-like, PALP domain (20.6%) Tryptophan synthase beta chain-like, PALP domain superfamily (20.6%)" QLPPPPEKDQVDNDVVVKDR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0015031 (33.3%) GO:0005886 (33.3%) GO:0022857 (33.3%) protein transport (33.3%) plasma membrane (33.3%) transmembrane transporter activity (33.3%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) ALADPTSTPETFGRPGHVNPLYAQDK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.5.4.25 (50%) 4.1.99.12 (50%)" "GTP cyclohydrolase II (50%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (50%)" GO:0009231 (12.5%) GO:0005829 (12.5%) "GO:0000287 (12.5%) GO:0003935 (12.5%) GO:0005525 (12.5%)" riboflavin biosynthetic process (12.5%) cytosol (12.5%) "magnesium ion binding (12.5%) GTP cyclohydrolase II activity (12.5%) GTP binding (12.5%)" "IPR000422 (16.7%) IPR000926 (16.7%) IPR016299 (16.7%)" "3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB (16.7%) GTP cyclohydrolase II, RibA (16.7%) Riboflavin biosynthesis protein RibBA (16.7%)" QIAGDGMVTGYGK Bacteria Bacteria 6.4.1.3 (100%) propionyl-CoA carboxylase (100%) GO:0015977 (20.2%) GO:0009317 (20.2%) "GO:0004658 (28.8%) GO:0003989 (20.2%) GO:0016740 (10.6%)" carbon fixation (20.2%) acetyl-CoA carboxylase complex (20.2%) "propionyl-CoA carboxylase activity (28.8%) acetyl-CoA carboxylase activity (20.2%) transferase activity (10.6%)" "IPR011762 (20.5%) IPR029045 (20.5%) IPR034733 (20.5%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20.5%) ClpP/crotonase-like domain superfamily (20.5%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.5%)" HSLREPFVPIFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.3.1.31 (100%) homoserine O-acetyltransferase (100%) GO:0019281 (26.9%) GO:0005737 (26.9%) "GO:0008899 (26.9%) GO:0004414 (19.2%)" L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine (26.9%) cytoplasm (26.9%) "homoserine O-succinyltransferase activity (26.9%) homoserine O-acetyltransferase activity (19.2%)" "IPR005697 (33.3%) IPR029062 (33.3%) IPR033752 (33.3%)" "Homoserine O-succinyltransferase MetA (33.3%) Class I glutamine amidotransferase-like (33.3%) MetA family (33.3%)" EHIEVKPVYTKEDLEGMEHLNYASGLPPYLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (16.7%) IPR006099 (16.7%) IPR006158 (16.7%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-binding domain (16.7%)" TVAFLTWAENFKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR014825 (50%) IPR016024 (50%)" "DNA alkylation repair enzyme (50%) Armadillo-type fold (50%)" DGAFSLVGGGDSVACVNK ASVTLNNIIPENK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR032573 (100%) Protein of unknown function DUF4925 (100%) AATILAEQLEAFVDLR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.6%) GO:0006352 (0%) GO:0006879 (0%)" "GO:0000428 (16.8%) GO:0005737 (16.3%) GO:0000345 (0%)" "GO:0003899 (16.6%) GO:0046983 (16.6%) GO:0003677 (16.5%)" "DNA-templated transcription (16.6%) DNA-templated transcription initiation (0%) intracellular iron ion homeostasis (0%)" "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.3%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA-directed RNA polymerase activity (16.6%) protein dimerization activity (16.6%) DNA binding (16.5%)" "IPR036603 (16.8%) IPR011263 (16.8%) IPR036643 (16.7%)" "RNA polymerase, RBP11-like subunit (16.8%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) DNA-directed RNA polymerase, insert domain superfamily (16.7%)" GHTNATVELADCK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (17.2%) IPR014628 (17.2%) IPR014710 (17.2%)" "RmlC-like cupin domain superfamily (17.2%) Mannose-6-phosphate isomerase, Firmicutes type, short form (17.2%) RmlC-like jelly roll fold (17.2%)" IAGVQIVNSGQAGADPEIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR008969 (14.3%) IPR012910 (14.3%) IPR023996 (14.3%)" "Carboxypeptidase-like, regulatory domain superfamily (14.3%) TonB-dependent receptor, plug domain (14.3%) TonB-dependent outer membrane protein, SusC/RagA (14.3%)" NNNELVAILGNFVNR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.10 (100%) methionine--tRNA ligase (100%) "GO:0006431 (16.7%) GO:0006418 (0.2%)" GO:0005829 (16.7%) "GO:0005524 (16.9%) GO:0004825 (16.7%) GO:0046872 (16.4%)" "methionyl-tRNA aminoacylation (16.7%) tRNA aminoacylation for protein translation (0.2%)" cytosol (16.7%) "ATP binding (16.9%) methionine-tRNA ligase activity (16.7%) metal ion binding (16.4%)" "IPR009080 (8.4%) IPR014729 (8.4%) IPR014758 (8.4%)" "Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (8.4%) Rossmann-like alpha/beta/alpha sandwich fold (8.4%) Methionyl-tRNA synthetase (8.4%)" VKPGGILIYDGYGIHTPAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0016903 (71.4%) GO:0019164 (28.6%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (71.4%) pyruvate synthase activity (28.6%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" VDIYTGTLGK root "2.3.1.29 (98.9%) 2.3.1.37 (1.1%)" "glycine C-acetyltransferase (98.9%) 5-aminolevulinate synthase (1.1%)" "GO:0019518 (14.7%) GO:0030148 (12.5%) GO:0006567 (0.3%)" "GO:0005829 (15.2%) GO:0016020 (12.6%) GO:0005759 (0.2%)" "GO:0030170 (15.3%) GO:0008890 (15.2%) GO:0004758 (6.9%)" "L-threonine catabolic process to glycine (14.7%) sphingolipid biosynthetic process (12.5%) L-threonine catabolic process (0.3%)" "cytosol (15.2%) membrane (12.6%) mitochondrial matrix (0.2%)" "pyridoxal phosphate binding (15.3%) glycine C-acetyltransferase activity (15.2%) serine C-palmitoyltransferase activity (6.9%)" "IPR004839 (16.3%) IPR015421 (16.3%) IPR015422 (16.3%)" "Aminotransferase, class I/classII, large domain (16.3%) Pyridoxal phosphate-dependent transferase, major domain (16.3%) Pyridoxal phosphate-dependent transferase, small domain (16.3%)" HHVLGVSEADLNTFGAVSQPVVEQMAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) "IPR008136 (50%) IPR036653 (50%)" "CinA, C-terminal (50%) CinA-like, C-terminal (50%)" NYNSVIPQNNPHKVTVDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.7 (100%) DNA-directed DNA polymerase (100%) GO:0006271 (16.7%) "GO:0005737 (16.7%) GO:0009360 (16.7%)" "GO:0003677 (16.7%) GO:0003887 (16.7%) GO:0008408 (16.7%)" DNA strand elongation involved in DNA replication (16.7%) "cytoplasm (16.7%) DNA polymerase III complex (16.7%)" "DNA binding (16.7%) DNA-directed DNA polymerase activity (16.7%) 3'-5' exonuclease activity (16.7%)" "IPR001001 (20.1%) IPR022635 (20.1%) IPR022637 (20.1%)" "DNA polymerase III, beta sliding clamp (20.1%) DNA polymerase III, beta sliding clamp, C-terminal (20.1%) DNA polymerase III, beta sliding clamp, central (20.1%)" GTVSFENVSAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016020 (100%) membrane (100%) "IPR006665 (17.2%) IPR011990 (17.2%) IPR019734 (17.2%)" "OmpA-like domain (17.2%) Tetratricopeptide-like helical domain superfamily (17.2%) Tetratricopeptide repeat (17.2%)" VGLESYGLSIVENVPIEITPNKYNER Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.5.4.25 (50%) 4.1.99.12 (50%)" "GTP cyclohydrolase II (50%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (50%)" GO:0009231 (12.5%) GO:0005829 (12.5%) "GO:0000287 (12.5%) GO:0003935 (12.5%) GO:0005525 (12.5%)" riboflavin biosynthetic process (12.5%) cytosol (12.5%) "magnesium ion binding (12.5%) GTP cyclohydrolase II activity (12.5%) GTP binding (12.5%)" "IPR000422 (16.7%) IPR000926 (16.7%) IPR016299 (16.7%)" "3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB (16.7%) GTP cyclohydrolase II, RibA (16.7%) Riboflavin biosynthesis protein RibBA (16.7%)" ASYTMEFLKYDEAPSNVAQAVIEAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0032790 (16.9%) GO:0006414 (0.2%)" "GO:0005737 (14.9%) GO:0005829 (0.2%)" "GO:0003746 (18.1%) GO:0005525 (16.9%) GO:0003924 (15.6%)" "ribosome disassembly (16.9%) translational elongation (0.2%)" "cytoplasm (14.9%) cytosol (0.2%)" "translation elongation factor activity (18.1%) GTP binding (16.9%) GTPase activity (15.6%)" "IPR000640 (6.6%) IPR014721 (6.6%) IPR035647 (6.6%)" "Elongation factor EFG, domain V-like (6.6%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.6%) EF-G domain III/V-like (6.6%)" EIVKEETVIDNSEIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006811 (25%) "GO:0009279 (25%) GO:0046930 (25%)" GO:0015288 (25%) monoatomic ion transport (25%) "cell outer membrane (25%) pore complex (25%)" porin activity (25%) "IPR006664 (20%) IPR006665 (20%) IPR011250 (20%)" "Outer membrane protein, bacterial (20%) OmpA-like domain (20%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (20%)" KYDIIDFDLGVK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.11 (100%) serine--tRNA ligase (100%) "GO:0006434 (24.9%) GO:0006412 (0.1%)" "GO:0005737 (24.7%) GO:0005829 (0.1%)" "GO:0004828 (24.9%) GO:0005524 (24.9%) GO:0016874 (0.3%)" "seryl-tRNA aminoacylation (24.9%) translation (0.1%)" "cytoplasm (24.7%) cytosol (0.1%)" "serine-tRNA ligase activity (24.9%) ATP binding (24.9%) ligase activity (0.3%)" "IPR045864 (13.7%) IPR002314 (13.6%) IPR002317 (13.6%)" "Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (13.7%) Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (13.6%) Serine-tRNA ligase, type1 (13.6%)" WLTPAYDAETQAEVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.2.2 (61.5%) 5.4.2.- (34.6%) 5.4.2.8 (3.8%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (61.5%) Phosphotransferases (phosphomutases) (34.6%) phosphomannomutase (3.8%)" "GO:0005975 (24.1%) GO:0006166 (24.1%)" "GO:0008973 (24.1%) GO:0000287 (23.9%) GO:0004614 (3.5%)" "carbohydrate metabolic process (24.1%) purine ribonucleoside salvage (24.1%)" "phosphopentomutase activity (24.1%) magnesium ion binding (23.9%) phosphoglucomutase activity (3.5%)" "IPR016055 (12.7%) IPR005844 (12.6%) IPR005845 (12.6%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (12.7%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.6%)" GKIEEYCWTDAQR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (12.6%) GO:0006261 (11.9%) GO:0032259 (0.7%)" "GO:0005737 (12.6%) GO:0005694 (11.9%)" "GO:0003677 (12.6%) GO:0005524 (12.6%) GO:0046872 (11.9%)" "DNA topological change (12.6%) DNA-templated DNA replication (11.9%) methylation (0.7%)" "cytoplasm (12.6%) chromosome (11.9%)" "DNA binding (12.6%) ATP binding (12.6%) metal ion binding (11.9%)" "IPR000565 (7.3%) IPR001241 (7.3%) IPR006171 (7.3%)" "DNA topoisomerase, type IIA, subunit B (7.3%) DNA topoisomerase, type IIA (7.3%) TOPRIM domain (7.3%)" NFNDVVIIASQAQYKPFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" DMVDSAPSAIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" HITVDGSVVNIPSYSVKPGQVIGVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" KAFIDGGGAPEAFIPQPDDAESR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR007139 (100%) Protein of unknown function DUF349 (100%) NIAIIAHVDHGKTTLVDK root 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0000027 (9.4%) GO:0009409 (8.5%) GO:0010467 (8.2%)" "GO:1990904 (9.7%) GO:0005829 (9.7%) GO:0009507 (0%)" "GO:0003924 (9.8%) GO:0005525 (9.8%) GO:0043022 (9.4%)" "ribosomal large subunit assembly (9.4%) response to cold (8.5%) gene expression (8.2%)" "ribonucleoprotein complex (9.7%) cytosol (9.7%) chloroplast (0%)" "GTPase activity (9.8%) GTP binding (9.8%) ribosome binding (9.4%)" "IPR000795 (6.8%) IPR027417 (6.8%) IPR005225 (6.7%)" "Translational (tr)-type GTP-binding domain (6.8%) P-loop containing nucleoside triphosphate hydrolase (6.8%) Small GTP-binding domain (6.7%)" LNNENAAEQLKDMDGILIAPGFGQR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (12%) GO:0044210 (12%)" "GO:0005829 (12%) GO:0097268 (12%)" "GO:0003883 (12%) GO:0005524 (12%) GO:0042802 (12%)" "pyrimidine nucleobase biosynthetic process (12%) 'de novo' CTP biosynthetic process (12%)" "cytosol (12%) cytoophidium (12%)" "CTP synthase activity (12%) ATP binding (12%) identical protein binding (12%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" ENQIVYTTLDELYHSSDIISLHCPLTEQTK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.28 (100%) D-lactate dehydrogenase (100%) "GO:0008720 (50%) GO:0051287 (50%)" "D-lactate dehydrogenase (NAD+) activity (50%) NAD binding (50%)" "IPR006139 (25%) IPR006140 (25%) IPR029753 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (25%)" EGLSVLEYFISTHGAR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) "GO:0000428 (16.9%) GO:0031981 (0.1%)" "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (15.5%)" DNA-templated transcription (16.9%) "DNA-directed RNA polymerase complex (16.9%) nuclear lumen (0.1%)" "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (15.5%)" "IPR007081 (9.2%) IPR038120 (9.1%) IPR045867 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.2%) RNA polymerase Rpb1, funnel domain superfamily (9.1%) DNA-directed RNA polymerase, subunit beta-prime (9.1%)" SMDEVDPELIK root GO:0016226 (98.8%) GO:1990229 (1.2%) iron-sulfur cluster assembly (98.8%) iron-sulfur cluster assembly complex (1.2%) "IPR000825 (20%) IPR010231 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufB (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" VNNANIEPVFFAYPDNAVLDAIIR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR008323 (100%) Uncharacterised conserved protein UCP033563 (100%) YGLGSKDTTPAQILSVFENLALPMPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (80%) 1.2.7.- (20%)" "pyruvate synthase (80%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (13%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (13%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" MNNTITIGNNFHSNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006207 (21.3%) GO:0006221 (21.3%)" GO:0009347 (21.3%) "GO:0046872 (21.3%) GO:0016740 (14.9%)" "'de novo' pyrimidine nucleobase biosynthetic process (21.3%) pyrimidine nucleotide biosynthetic process (21.3%)" aspartate carbamoyltransferase complex (21.3%) "metal ion binding (21.3%) transferase activity (14.9%)" "IPR002801 (20%) IPR020542 (20%) IPR020545 (20%)" "Aspartate transcarbamylase regulatory subunit (20%) Aspartate carbamoyltransferase regulatory subunit, C-terminal (20%) Aspartate carbamoyltransferase regulatory subunit, N-terminal (20%)" YSYDEYPGNPNGSDYSVAGLASPDGR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.6%) GO:0006164 (0.7%)" GO:0005737 (20.3%) "GO:0004642 (20.3%) GO:0005524 (19.6%) GO:0046872 (19.6%)" "'de novo' IMP biosynthetic process (19.6%) purine nucleotide biosynthetic process (0.7%)" cytoplasm (20.3%) "phosphoribosylformylglycinamidine synthase activity (20.3%) ATP binding (19.6%) metal ion binding (19.6%)" "IPR029062 (11.5%) IPR010073 (11.1%) IPR010918 (11.1%)" "Class I glutamine amidotransferase-like (11.5%) Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%)" EVHGTPEEEAALEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (38.9%) "GO:0016615 (22.2%) GO:0016616 (22.2%) GO:0030060 (16.7%)" malate metabolic process (38.9%) "malate dehydrogenase activity (22.2%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (22.2%) L-malate dehydrogenase (NAD+) activity (16.7%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" AHLPSTEEIFMHPDLEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016740 (100%) transferase activity (100%) "IPR011990 (51.4%) IPR019734 (40.5%) IPR013105 (8.1%)" "Tetratricopeptide-like helical domain superfamily (51.4%) Tetratricopeptide repeat (40.5%) Tetratricopeptide repeat 2 (8.1%)" FADGTPVTAEAVK Bacteria Bacteria "GO:0042938 (25.8%) GO:0015031 (0.2%)" "GO:0030288 (25.8%) GO:0043190 (22.2%) GO:0016020 (0.2%)" GO:1904680 (25.8%) "dipeptide transport (25.8%) protein transport (0.2%)" "outer membrane-bounded periplasmic space (25.8%) ATP-binding cassette (ABC) transporter complex (22.2%) membrane (0.2%)" peptide transmembrane transporter activity (25.8%) "IPR000914 (26.5%) IPR039424 (26.5%) IPR023765 (23.7%)" "Solute-binding protein family 5 domain (26.5%) Solute-binding protein family 5 (26.5%) Solute-binding protein family 5, conserved site (23.7%)" GTPEEEAALEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (34.5%) "GO:0016616 (30.9%) GO:0016615 (30%) GO:0030060 (4.5%)" malate metabolic process (34.5%) "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (30.9%) malate dehydrogenase activity (30%) L-malate dehydrogenase (NAD+) activity (4.5%)" "IPR015955 (17%) IPR022383 (17%) IPR001236 (16.5%)" "Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (17%) Lactate/malate dehydrogenase, C-terminal (17%) Lactate/malate dehydrogenase, N-terminal (16.5%)" KAVDNAAGVRQEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0051301 (11.8%) GO:0042834 (88.2%) cell division (11.8%) peptidoglycan binding (88.2%) "IPR007730 (33.3%) IPR036680 (33.3%) IPR052521 (33.3%)" "Sporulation-like domain (33.3%) Sporulation-like domain superfamily (33.3%) Bacterial cell division SPOR domain-containing protein (33.3%)" ANVQDAIHDTEIDSLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.-.- (100%) Acting on acid anhydrides (100%) GO:0016787 (100%) hydrolase activity (100%) "IPR025669 (33.3%) IPR027417 (33.3%) IPR050678 (33.3%)" "AAA domain (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%) DNA Partitioning ATPase (33.3%)" EKADMLYAEIDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.9%) GO:0008615 (19.9%)" GO:0005737 (19.9%) "GO:0004648 (19.9%) GO:0030170 (19.9%) GO:0008483 (0.6%)" "L-serine biosynthetic process (19.9%) pyridoxine biosynthetic process (19.9%)" cytoplasm (19.9%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.9%) pyridoxal phosphate binding (19.9%) transaminase activity (0.6%)" "IPR000192 (20.1%) IPR022278 (20.1%) IPR015421 (19.9%)" "Aminotransferase class V domain (20.1%) Phosphoserine aminotransferase (20.1%) Pyridoxal phosphate-dependent transferase, major domain (19.9%)" CDMVDDEEMLELVEMEMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0006414 (0.2%) "GO:0005829 (20%) GO:0032045 (0.5%) GO:0005737 (0.2%)" "GO:0003746 (20.1%) GO:0003924 (20.1%) GO:0005525 (20.1%)" translational elongation (0.2%) "cytosol (20%) guanyl-nucleotide exchange factor complex (0.5%) cytoplasm (0.2%)" "translation elongation factor activity (20.1%) GTPase activity (20.1%) GTP binding (20.1%)" "IPR000795 (8.4%) IPR027417 (8.4%) IPR050055 (8.4%)" "Translational (tr)-type GTP-binding domain (8.4%) P-loop containing nucleoside triphosphate hydrolase (8.4%) Elongation factor Tu GTPase (8.4%)" LINACVNEKQEAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR025366 (100%) Protein of unknown function DUF4270 (100%) LMEQEEMEQEDSKILK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (24.7%) "GO:0003743 (25.9%) GO:0003924 (24.7%) GO:0005525 (24.7%)" cytoplasm (24.7%) "translation initiation factor activity (25.9%) GTPase activity (24.7%) GTP binding (24.7%)" "IPR000178 (9.1%) IPR000795 (9.1%) IPR005225 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translational (tr)-type GTP-binding domain (9.1%) Small GTP-binding domain (9.1%)" SRQQFDKPSVTKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001911 (50%) IPR038380 (50%)" "Small ribosomal subunit protein bS21 (50%) Small ribosomal subunit protein bS21 superfamily (50%)" IQLPAHVSVNALR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" IDAMDAANEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0016903 (92.9%) GO:0019164 (7.1%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (92.9%) pyruvate synthase activity (7.1%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" IQLNDAYAEVDEIQAYVTNER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0015031 (33.3%) GO:0005886 (33.3%) GO:0022857 (33.3%) protein transport (33.3%) plasma membrane (33.3%) transmembrane transporter activity (33.3%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) GVLGYTEDDVVSTDFNGEVCTSVFDAK root "1.2.1.- (88.9%) 1.2.1.12 (11.1%)" "With NAD(+) or NADP(+) as acceptor (88.9%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (11.1%)" "GO:0006006 (19.4%) GO:0072524 (19%) GO:0006096 (0.5%)" "GO:0005737 (0.4%) GO:0005576 (0%) GO:0005829 (0%)" "GO:0051287 (19.7%) GO:0050661 (19.4%) GO:0004365 (16.6%)" "glucose metabolic process (19.4%) pyridine-containing compound metabolic process (19%) glycolytic process (0.5%)" "cytoplasm (0.4%) extracellular region (0%) cytosol (0%)" "NAD binding (19.7%) NADP binding (19.4%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (16.6%)" "IPR020829 (17.4%) IPR020831 (17.4%) IPR020830 (16.5%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.4%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.4%) Glyceraldehyde 3-phosphate dehydrogenase, active site (16.5%)" MIAKVEAEHENR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005506 (50%) GO:0016491 (20%) GO:0016692 (20%)" "iron ion binding (50%) oxidoreductase activity (20%) NADH peroxidase activity (20%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" ALTEANGDIELAIENMR root GO:0006414 (0.2%) "GO:0005737 (49.2%) GO:0005739 (0.1%) GO:0005829 (0.1%)" "GO:0003746 (50.2%) GO:0005085 (0.1%) GO:0008270 (0.1%)" translational elongation (0.2%) "cytoplasm (49.2%) mitochondrion (0.1%) cytosol (0.1%)" "translation elongation factor activity (50.2%) guanyl-nucleotide exchange factor activity (0.1%) zinc ion binding (0.1%)" "IPR001816 (20.1%) IPR009060 (20.1%) IPR018101 (20.1%)" "Translation elongation factor EFTs/EF1B (20.1%) UBA-like superfamily (20.1%) Translation elongation factor Ts, conserved site (20.1%)" SCGFHIEPGPDGGLVVLDDTTIFER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003677 (100%) DNA binding (100%) QVLGQQPDEPVMYEALGSILPYFEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" TNEALKEVGAL Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25%) GO:0006099 (25%)" "GO:0004459 (25%) GO:0030060 (25%)" "lactate metabolic process (25%) tricarboxylic acid cycle (25%)" "L-lactate dehydrogenase (NAD+) activity (25%) L-malate dehydrogenase (NAD+) activity (25%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR011275 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 3 (16.7%)" TYVVMEEVKQSNR Bacteria Bacteria "GO:0006524 (20.1%) GO:0043201 (20.1%) GO:0006355 (19.5%)" "GO:0005829 (20.1%) GO:0032993 (0%)" "GO:0043565 (20.1%) GO:0042802 (0%) GO:0000976 (0%)" "alanine catabolic process (20.1%) response to L-leucine (20.1%) regulation of DNA-templated transcription (19.5%)" "cytosol (20.1%) protein-DNA complex (0%)" "sequence-specific DNA binding (20.1%) identical protein binding (0%) transcription cis-regulatory region binding (0%)" "IPR011008 (12.8%) IPR019887 (12.8%) IPR019888 (12.5%)" "Dimeric alpha-beta barrel (12.8%) Transcription regulator AsnC/Lrp, ligand binding domain (12.8%) Transcription regulator AsnC-like (12.5%)" IFGTIDNTPISSITMGVATILAAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (30.8%) GO:0006044 (30.8%)" "GO:0004342 (30.8%) GO:0016853 (7.7%)" "carbohydrate metabolic process (30.8%) N-acetylglucosamine metabolic process (30.8%)" "glucosamine-6-phosphate deaminase activity (30.8%) isomerase activity (7.7%)" "IPR003737 (14.3%) IPR004547 (14.3%) IPR006148 (14.3%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.3%) Glucosamine-6-phosphate isomerase (14.3%) Glucosamine/galactosamine-6-phosphate isomerase (14.3%)" IVEVSHEEVQK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.4.2.1 (100%) purine-nucleoside phosphorylase (100%) GO:0009116 (33.2%) GO:0005737 (33.2%) "GO:0004731 (33.2%) GO:0016757 (0.3%)" nucleoside metabolic process (33.2%) cytoplasm (33.2%) "purine-nucleoside phosphorylase activity (33.2%) glycosyltransferase activity (0.3%)" "IPR000845 (24.8%) IPR011268 (24.8%) IPR035994 (24.8%)" "Nucleoside phosphorylase domain (24.8%) Purine nucleoside phosphorylase (24.8%) Nucleoside phosphorylase superfamily (24.8%)" QTVLASVESFMDIVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (50%) IPR010992 (50%)" "Histone-like DNA-binding protein (50%) Integration host factor (IHF)-like DNA-binding domain superfamily (50%)" SLMAELPQNTLCVYSFSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "4.1.1.12 (93.8%) 2.6.1.1 (6.3%)" "aspartate 4-decarboxylase (93.8%) aspartate transaminase (6.3%)" GO:0006520 (27.4%) "GO:0030170 (27.4%) GO:0008483 (24.7%) GO:0047688 (9.6%)" amino acid metabolic process (27.4%) "pyridoxal phosphate binding (27.4%) transaminase activity (24.7%) aspartate 4-decarboxylase activity (9.6%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" ANLQQLQQILNMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (25.2%) IPR024480 (25.2%) IPR036737 (25.2%)" "Tetratricopeptide-like helical domain superfamily (25.2%) Domain of unknown function DUF3868 (25.2%) OmpA-like domain superfamily (25.2%)" LSEKGDDEAMIIDKDFVR Bacteria Bacteria 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.6%) GO:0005829 (16.6%) "GO:0000049 (16.6%) GO:0004824 (16.6%) GO:0005524 (16.6%)" lysyl-tRNA aminoacylation (16.6%) cytosol (16.6%) "tRNA binding (16.6%) lysine-tRNA ligase activity (16.6%) ATP binding (16.6%)" "IPR004364 (12.3%) IPR006195 (12.3%) IPR045864 (12.1%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (12.3%) Aminoacyl-tRNA synthetase, class II (12.3%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (12.1%)" GIGMGYVKPEFAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (15.3%) GO:0032259 (10.2%) GO:0006546 (0.6%)" "GO:0005829 (15.9%) GO:0005960 (15.9%)" "GO:0004047 (15.9%) GO:0008483 (15.9%) GO:0008168 (10.2%)" "glycine decarboxylation via glycine cleavage system (15.3%) methylation (10.2%) glycine catabolic process (0.6%)" "cytosol (15.9%) glycine cleavage complex (15.9%)" "aminomethyltransferase activity (15.9%) transaminase activity (15.9%) methyltransferase activity (10.2%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" YGKEVADNTSILYGGSCKPSNAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.4%) GO:0006096 (16.4%) GO:0019563 (16.4%)" "GO:0005829 (16.4%) GO:0016020 (0.7%)" GO:0004807 (16.4%) "gluconeogenesis (16.4%) glycolytic process (16.4%) glycerol catabolic process (16.4%)" "cytosol (16.4%) membrane (0.7%)" triose-phosphate isomerase activity (16.4%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" LLDAAHEALFR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales MKAFVFPGQGAQFVGMGK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0006633 (17.3%) GO:0005829 (17.3%) "GO:0004314 (64.6%) GO:0016746 (0.5%) GO:0016740 (0.3%)" fatty acid biosynthetic process (17.3%) cytosol (17.3%) "[acyl-carrier-protein] S-malonyltransferase activity (64.6%) acyltransferase activity (0.5%) transferase activity (0.3%)" "IPR001227 (14.3%) IPR014043 (14.3%) IPR016035 (14.3%)" "Acyl transferase domain superfamily (14.3%) Acyl transferase domain (14.3%) Acyl transferase/acyl hydrolase/lysophospholipase (14.3%)" ASLGEISDACEVVVGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (16.7%) IPR006099 (16.7%) IPR006158 (16.7%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-binding domain (16.7%)" DEGMWLLQLMQQQHSIDMMKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.14.- (100%) Dipeptidyl-peptidases and tripeptidyl-peptidases (100%) "GO:0006508 (25.1%) GO:0043171 (24.6%)" "GO:0008239 (25.1%) GO:0070009 (25.1%)" "proteolysis (25.1%) peptide catabolic process (24.6%)" "dipeptidyl-peptidase activity (25.1%) serine-type aminopeptidase activity (25.1%)" "IPR009003 (33.3%) IPR019500 (33.3%) IPR043504 (33.3%)" "Peptidase S1, PA clan (33.3%) Peptidase S46 (33.3%) Peptidase S1, PA clan, chymotrypsin-like fold (33.3%)" YVEHTDFNEEVIKDADILYMTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006207 (16.7%) GO:0006520 (16.7%) GO:0044205 (16.7%)" GO:0005829 (16.7%) "GO:0004070 (16.7%) GO:0016597 (16.7%)" "'de novo' pyrimidine nucleobase biosynthetic process (16.7%) amino acid metabolic process (16.7%) 'de novo' UMP biosynthetic process (16.7%)" cytosol (16.7%) "aspartate carbamoyltransferase activity (16.7%) amino acid binding (16.7%)" "IPR002082 (20%) IPR006130 (20%) IPR006131 (20%)" "Aspartate carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%)" RSDTEYTER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides NAISEAPGVNQLGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) GO:0005975 (50%) GO:0004563 (50%) carbohydrate metabolic process (50%) beta-N-acetylhexosaminidase activity (50%) "IPR015882 (16.7%) IPR015883 (16.7%) IPR017853 (16.7%)" "Beta-hexosaminidase, bacterial type, N-terminal (16.7%) Glycoside hydrolase family 20, catalytic domain (16.7%) Glycoside hydrolase superfamily (16.7%)" VIDPETGEECPTGVQGEMCNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.2.1.- (50%) 6.2.1.41 (50%)" "Acid--thiol ligases (50%) 3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate-CoA ligase (50%)" GO:0006631 (50%) GO:0031956 (50%) fatty acid metabolic process (50%) medium-chain fatty acid-CoA ligase activity (50%) "IPR000873 (25%) IPR020845 (25%) IPR025110 (25%)" "AMP-dependent synthetase/ligase domain (25%) AMP-binding, conserved site (25%) AMP-binding enzyme, C-terminal domain (25%)" NLAPAGVTFVIVK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20.2%) GO:0008615 (18.8%)" GO:0005737 (20.2%) "GO:0004648 (20.2%) GO:0030170 (20.2%) GO:0008483 (0.2%)" "L-serine biosynthetic process (20.2%) pyridoxine biosynthetic process (18.8%)" cytoplasm (20.2%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20.2%) pyridoxal phosphate binding (20.2%) transaminase activity (0.2%)" "IPR000192 (19.9%) IPR022278 (19.9%) IPR015421 (19.7%)" "Aminotransferase class V domain (19.9%) Phosphoserine aminotransferase (19.9%) Pyridoxal phosphate-dependent transferase, major domain (19.7%)" SLPVYGDGTNVRDWLYVEDHCK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.46 (100%) dTDP-glucose 4,6-dehydratase (100%) GO:0009225 (50%) GO:0008460 (50%) nucleotide-sugar metabolic process (50%) dTDP-glucose 4,6-dehydratase activity (50%) "IPR005888 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "dTDP-glucose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" KALAINPDYIESLSNLGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" IGDKSVIPVLADLLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) "IPR004155 (25%) IPR010496 (25%) IPR011989 (25%)" "PBS lyase HEAT-like repeat (25%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (25%) Armadillo-like helical (25%)" VLQNPNDYDIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (25%) IPR018211 (25%) IPR044731 (25%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (25%) Alcohol dehydrogenase, iron-type, conserved site (25%) Butanol dehydrogenase-like (25%)" CAVFTPSSIGSFGESTPHVQTPQDTIQRPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.1.3.- (100%) Acting on carbohydrates and derivatives (100%) GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" DKQFVLEADQVIFKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR025347 (100%) Protein of unknown function DUF4251 (100%) ISHIEHLGIAVK root "5.1.99.1 (98.2%) 4.4.1.5 (0.9%) 5.1.99.- (0.9%)" "methylmalonyl-CoA epimerase (98.2%) lactoylglutathione lyase (0.9%) Acting on other compounds (0.9%)" GO:0046491 (47.2%) "GO:0004493 (47.2%) GO:0016829 (2.7%) GO:0051213 (1.8%)" L-methylmalonyl-CoA metabolic process (47.2%) "methylmalonyl-CoA epimerase activity (47.2%) lyase activity (2.7%) dioxygenase activity (1.8%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" TNAPTNTITR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (25.4%) GO:0000428 (23.9%) "GO:0003677 (25.4%) GO:0003899 (25.4%)" DNA-templated transcription (25.4%) DNA-directed RNA polymerase complex (23.9%) "DNA binding (25.4%) DNA-directed RNA polymerase activity (25.4%)" "IPR006110 (89.5%) IPR036161 (10.5%)" "RNA polymerase, subunit omega/Rpo6/RPB6 (89.5%) RPB6/omega subunit-like superfamily (10.5%)" CKYDSPTAFDSVSLLNQNVSSER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006879 (20%) GO:0005829 (20%) "GO:0004322 (20%) GO:0008199 (20%) GO:0020037 (20%)" intracellular iron ion homeostasis (20%) cytosol (20%) "ferroxidase activity (20%) ferric iron binding (20%) heme binding (20%)" "IPR008331 (16.7%) IPR009040 (16.7%) IPR009078 (16.7%)" "Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%) Ferritin-like superfamily (16.7%)" LGFSDFQIAR root "6.3.5.5 (86.9%) 6.3.4.16 (9.7%) 3.5.2.3 (1.5%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (86.9%) carbamoyl-phosphate synthase (ammonia) (9.7%) dihydroorotase (1.5%)" "GO:0006541 (13.9%) GO:0006221 (11.3%) GO:0006526 (11.3%)" "GO:0005737 (13.5%) GO:0005951 (0.3%) GO:0005829 (0.1%)" "GO:0004088 (13.9%) GO:0005524 (13.8%) GO:0046872 (13.8%)" "glutamine metabolic process (13.9%) pyrimidine nucleotide biosynthetic process (11.3%) L-arginine biosynthetic process (11.3%)" "cytoplasm (13.5%) carbamoyl-phosphate synthase complex (0.3%) cytosol (0.1%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.9%) ATP binding (13.8%) metal ion binding (13.8%)" "IPR005480 (9.9%) IPR036897 (9.9%) IPR016185 (9.9%)" "Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (9.9%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily (9.9%) Pre-ATP-grasp domain superfamily (9.9%)" IAIETADTEGNEEFDEEVLHMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.7%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.7%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011260 (16.7%) IPR011262 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.7%) DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" AVYFPHQASNYDPDYDYECATQDGAKDLCK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0043165 (32.7%) GO:0051205 (32.7%) GO:0007155 (0.3%)" "GO:1990063 (32.7%) GO:0019867 (0.9%) GO:0009279 (0.3%)" "Gram-negative-bacterium-type cell outer membrane assembly (32.7%) protein insertion into membrane (32.7%) cell adhesion (0.3%)" "Bam protein complex (32.7%) outer membrane (0.9%) cell outer membrane (0.3%)" "IPR000184 (21.5%) IPR039910 (20.9%) IPR023707 (19.8%)" "Bacterial surface antigen (D15) (21.5%) Surface antigen D15-like (20.9%) Outer membrane protein assembly factor BamA (19.8%)" NALEDAGMTPEDIDYINVHGTSTPVGDISEVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" VGNLAFLDVTGR root "GO:0045893 (16.3%) GO:0006351 (0%) GO:0045013 (0%)" "GO:0005829 (16.8%) GO:0032993 (16.3%)" "GO:0003700 (16.9%) GO:0030552 (16.6%) GO:0043565 (16.3%)" "positive regulation of DNA-templated transcription (16.3%) DNA-templated transcription (0%) carbon catabolite repression of transcription (0%)" "cytosol (16.8%) protein-DNA complex (16.3%)" "DNA-binding transcription factor activity (16.9%) cAMP binding (16.6%) sequence-specific DNA binding (16.3%)" "IPR036388 (11.2%) IPR014710 (11.2%) IPR018490 (11.2%)" "Winged helix-like DNA-binding domain superfamily (11.2%) RmlC-like jelly roll fold (11.2%) Cyclic nucleotide-binding domain superfamily (11.2%)" NLAPAGVTLAIVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20.1%) GO:0008615 (19.5%)" GO:0005737 (20.1%) "GO:0004648 (20.1%) GO:0030170 (20.1%)" "L-serine biosynthetic process (20.1%) pyridoxine biosynthetic process (19.5%)" cytoplasm (20.1%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20.1%) pyridoxal phosphate binding (20.1%)" "IPR000192 (16.9%) IPR015421 (16.9%) IPR015422 (16.9%)" "Aminotransferase class V domain (16.9%) Pyridoxal phosphate-dependent transferase, major domain (16.9%) Pyridoxal phosphate-dependent transferase, small domain (16.9%)" KGDTVYVNAGEDKGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20.1%) "GO:0005840 (19.7%) GO:1990904 (19.7%) GO:0022625 (0.3%)" "GO:0003735 (20.1%) GO:0019843 (20.1%)" translation (20.1%) "ribosome (19.7%) ribonucleoprotein complex (19.7%) cytosolic large ribosomal subunit (0.3%)" "structural constituent of ribosome (20.1%) rRNA binding (20.1%)" "IPR003256 (16.8%) IPR005824 (16.8%) IPR008991 (16.8%)" "Large ribosomal subunit protein uL24 (16.8%) KOW (16.8%) Translation protein SH3-like domain superfamily (16.8%)" NTTGDVLRPALQIIK Bacteria Bacteria 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0008959 (57%) GO:0016407 (41.9%) GO:0016746 (1.1%)" "phosphate acetyltransferase activity (57%) acetyltransferase activity (41.9%) acyltransferase activity (1.1%)" "IPR002505 (17%) IPR050500 (17%) IPR004614 (16.6%)" "Phosphate acetyl/butaryl transferase (17%) Phosphate Acetyltransferase/Butyryltransferase (17%) Phosphate acetyltransferase (16.6%)" VIPYFDFVVPTELPGVDPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.2%) GO:0005829 (17.2%) "GO:0004612 (17.2%) GO:0005524 (17.2%) GO:0046872 (16.3%)" gluconeogenesis (17.2%) cytosol (17.2%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.2%) ATP binding (17.2%) metal ion binding (16.3%)" "IPR001272 (25.6%) IPR013035 (25.6%) IPR008210 (24.4%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.6%) Phosphoenolpyruvate carboxykinase, C-terminal (25.6%) Phosphoenolpyruvate carboxykinase, N-terminal (24.4%)" HSGMIQASELK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" LVCDMSSDIFSRPIDISK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" HVLYADEAYCIGPAASK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.3.4.14 (88%) 6.4.1.7 (8%) 6.4.1.2 (4%)" "biotin carboxylase (88%) 2-oxoglutarate carboxylase (8%) acetyl-CoA carboxylase (4%)" GO:2001295 (17.6%) "GO:0005524 (21.8%) GO:0046872 (21.8%) GO:0004075 (17.6%)" malonyl-CoA biosynthetic process (17.6%) "ATP binding (21.8%) metal ion binding (21.8%) biotin carboxylase activity (17.6%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" VGDIVIFNDGYGVK root "GO:0051085 (1.2%) GO:0006457 (0%) GO:0009408 (0%)" "GO:0005737 (15.8%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0005524 (16.6%) GO:0044183 (16.6%) GO:0046872 (16.5%)" "obsolete chaperone cofactor-dependent protein refolding (1.2%) protein folding (0%) response to heat (0%)" "cytoplasm (15.8%) cytosol (0%) membrane (0%)" "ATP binding (16.6%) protein folding chaperone (16.6%) metal ion binding (16.5%)" "IPR011032 (25.3%) IPR020818 (25.3%) IPR037124 (25.3%)" "GroES-like superfamily (25.3%) GroES chaperonin family (25.3%) GroES chaperonin superfamily (25.3%)" DVFGEHAYQLNISSTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" KATDIHAELGVSCMVQPSLPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR013022 (33.3%) IPR036237 (33.3%) IPR050312 (33.3%)" "Xylose isomerase-like, TIM barrel domain (33.3%) Xylose isomerase-like superfamily (33.3%) IolE/XylA/MocC-like (33.3%)" GGMVAPDEVTFEYIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.33 (100%) 3-isopropylmalate dehydratase (100%) GO:0009098 (24.8%) "GO:0046872 (24.8%) GO:0051539 (24.8%) GO:0003861 (24.5%)" L-leucine biosynthetic process (24.8%) "metal ion binding (24.8%) 4 iron, 4 sulfur cluster binding (24.8%) 3-isopropylmalate dehydratase activity (24.5%)" "IPR001030 (14.5%) IPR015931 (14.5%) IPR036008 (14.5%)" "Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (14.5%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (14.5%) Aconitase, iron-sulfur domain (14.5%)" GTLDTAGVAGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20.4%) "GO:0015935 (20.4%) GO:0005840 (0.4%)" "GO:0003735 (20.4%) GO:0019843 (20%) GO:0000049 (18.6%)" translation (20.4%) "small ribosomal subunit (20.4%) ribosome (0.4%)" "structural constituent of ribosome (20.4%) rRNA binding (20%) tRNA binding (18.6%)" "IPR005679 (33.3%) IPR006032 (33.3%) IPR012340 (33.3%)" "Ribosomal protein uS12, bacteria (33.3%) Small ribosomal subunit protein uS12 (33.3%) Nucleic acid-binding, OB-fold (33.3%)" NYLEFDKGLPNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis TDGYKVFTDTQIAEGFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) HAYASPEDENANMEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0000166 (50%) GO:0016798 (50%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (50%)" "IPR000683 (25%) IPR036291 (25%) IPR049303 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) NAD(P)-binding domain superfamily (25%) Glycosyl hydrolase 109, C-terminal domain (25%)" ENNPQDVLGAQDFIYR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR024302 (47.5%) IPR041662 (2.5%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (47.5%) SusD-like 2 (2.5%)" IKLVSSAGTGHFYTTTK Pseudomonadati Bacteria Pseudomonadati "GO:0006412 (32.8%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (32.7%) GO:0005840 (0.8%) GO:0005737 (0.2%)" "GO:0003735 (32.9%) GO:0000049 (0.3%)" "translation (32.8%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (32.7%) ribosome (0.8%) cytoplasm (0.2%)" "structural constituent of ribosome (32.9%) tRNA binding (0.3%)" "IPR001705 (25.1%) IPR011332 (25.1%) IPR038584 (25.1%)" "Large ribosomal subunit protein bL33 (25.1%) Zinc-binding ribosomal protein (25.1%) Large ribosomal subunit protein bL33 superfamily (25.1%)" CRQQEMNTQTGR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "3.1.1.96 (57.5%) 3.1.1.- (42.2%) 3.1.-.- (0.3%)" "D-aminoacyl-tRNA deacylase (57.5%) Carboxylic ester hydrolases (42.2%) Acting on ester bonds (0.3%)" "GO:0019478 (16.3%) GO:0006399 (0.1%) GO:0009408 (0.1%)" GO:0005737 (16.9%) "GO:0051500 (16.9%) GO:0000049 (16.3%) GO:0043908 (16.3%)" "D-amino acid catabolic process (16.3%) tRNA metabolic process (0.1%) response to heat (0.1%)" cytoplasm (16.9%) "D-tyrosyl-tRNA(Tyr) deacylase activity (16.9%) tRNA binding (16.3%) Ser(Gly)-tRNA(Ala) hydrolase activity (16.3%)" "IPR003732 (50%) IPR023509 (50%)" "D-aminoacyl-tRNA deacylase DTD (50%) D-aminoacyl-tRNA deacylase-like superfamily (50%)" EVVQQAYEQVKGNTGGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" EGIWIEKLDSHPGELIPEELRQAGEGDAVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" SLQQLAEDMGLTVER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (20%) GO:0009098 (20%) GO:0009099 (20%)" GO:0004084 (26.7%) "isoleucine biosynthetic process (20%) L-leucine biosynthetic process (20%) L-valine biosynthetic process (20%)" branched-chain-amino-acid transaminase activity (26.7%) "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" VLQPHQSHDVGEVNGETLSAQDYQNMVEEYTEVIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR027304 (33.3%) IPR046357 (33.3%) IPR052029 (33.3%)" "Trigger factor/SurA domain superfamily (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) Periplasmic chaperone PpiD (33.3%)" SSMFNTDRIDHLYQDPHVENR Pseudomonadati Bacteria Pseudomonadati 4.2.1.47 (100%) GDP-mannose 4,6-dehydratase (100%) GO:0042351 (33.3%) "GO:0008446 (33.3%) GO:0070401 (33.3%)" 'de novo' GDP-L-fucose biosynthetic process (33.3%) "GDP-mannose 4,6-dehydratase activity (33.3%) NADP+ binding (33.3%)" "IPR006368 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "GDP-mannose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" VTYHIEPPSK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota GO:0046872 (100%) metal ion binding (100%) "IPR018470 (50.5%) IPR038482 (49.5%)" "Periplasmic metal-binding protein Tp34-type (50.5%) Periplasmic metal-binding protein Tp34-type superfamily (49.5%)" YSKEHEWLR root 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) "GO:0019464 (25.4%) GO:0009249 (23.5%) GO:0006730 (0%)" "GO:0005829 (25.4%) GO:0005960 (25.4%) GO:0005739 (0.1%)" "GO:0004375 (0%) GO:0008168 (0%) GO:0008483 (0%)" "glycine decarboxylation via glycine cleavage system (25.4%) protein lipoylation (23.5%) one-carbon metabolic process (0%)" "cytosol (25.4%) glycine cleavage complex (25.4%) mitochondrion (0.1%)" "glycine dehydrogenase (decarboxylating) activity (0%) methyltransferase activity (0%) transaminase activity (0%)" "IPR011053 (16.8%) IPR033753 (16.8%) IPR002930 (16.7%)" "Single hybrid motif (16.8%) Glycine cleavage system H-protein/Simiate (16.8%) Glycine cleavage system H-protein (16.7%)" VLMFGSNAYLGLTNHPK Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.3.1.50 (80%) 2.3.1.47 (20%)" "serine C-palmitoyltransferase (80%) 8-amino-7-oxononanoate synthase (20%)" GO:0030148 (17.5%) GO:0016020 (17.5%) "GO:0030170 (28.6%) GO:0016740 (12.7%) GO:0008483 (7.1%)" sphingolipid biosynthetic process (17.5%) membrane (17.5%) "pyridoxal phosphate binding (28.6%) transferase activity (12.7%) transaminase activity (7.1%)" "IPR001917 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class-II, pyridoxal-phosphate binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" INSNEELALPKEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.4.1.21 (100%) S-ribosylhomocysteine lyase (100%) "GO:0009372 (31.9%) GO:0019284 (0.3%) GO:2000145 (0.3%)" GO:0005829 (0.3%) "GO:0005506 (31.9%) GO:0043768 (31.9%) GO:0016787 (2.3%)" "quorum sensing (31.9%) L-methionine salvage from S-adenosylmethionine (0.3%) regulation of cell motility (0.3%)" cytosol (0.3%) "iron ion binding (31.9%) S-ribosylhomocysteine lyase activity (31.9%) hydrolase activity (2.3%)" "IPR003815 (33.3%) IPR011249 (33.3%) IPR037005 (33.3%)" "S-ribosylhomocysteinase (LuxS) (33.3%) Metalloenzyme, LuxS/M16 peptidase-like (33.3%) S-ribosylhomocysteinase (LuxS) superfamily (33.3%)" IGLWGTSLGGGHVFSAAAQDQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.7.1.19 (100%) 2,6-dihydroxypseudooxynicotine hydrolase (100%) "GO:0052689 (60%) GO:0016787 (40%)" "carboxylic ester hydrolase activity (60%) hydrolase activity (40%)" "IPR000073 (33.3%) IPR029058 (33.3%) IPR051411 (17.9%)" "Alpha/beta hydrolase fold-1 (33.3%) Alpha/Beta hydrolase fold (33.3%) Polyketide transferase af380 (17.9%)" MTFNDDPNYAGVIHGGIDGGTGYNALIHR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.5%) IPR008969 (12.5%) IPR012910 (12.5%)" "TonB-dependent receptor-like, beta-barrel (12.5%) Carboxypeptidase-like, regulatory domain superfamily (12.5%) TonB-dependent receptor, plug domain (12.5%)" IIAQCDASGER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" LYSNMQNHGSNQR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.5%) IPR008969 (12.5%) IPR012910 (12.5%)" "TonB-dependent receptor-like, beta-barrel (12.5%) Carboxypeptidase-like, regulatory domain superfamily (12.5%) TonB-dependent receptor, plug domain (12.5%)" RILLSSLEGFAITSIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.7%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.7%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011260 (16.7%) IPR011262 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.7%) DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" FCQAFILELWR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (25.8%) GO:0005829 (25.3%) "GO:0004354 (25.8%) GO:0000166 (23%)" glutamate biosynthetic process (25.8%) cytosol (25.3%) "glutamate dehydrogenase (NADP+) activity (25.8%) nucleotide binding (23%)" "IPR006095 (12%) IPR006096 (12%) IPR006097 (12%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (12%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (12%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12%)" SLKKGPFIDLHLLK root "GO:0006412 (16.7%) GO:0000028 (16.6%) GO:0002181 (0%)" "GO:0005737 (16.6%) GO:0015935 (16.6%) GO:0005840 (0.3%)" "GO:0003735 (16.7%) GO:0019843 (16.6%) GO:0000049 (0%)" "translation (16.7%) ribosomal small subunit assembly (16.6%) cytoplasmic translation (0%)" "cytoplasm (16.6%) small ribosomal subunit (16.6%) ribosome (0.3%)" "structural constituent of ribosome (16.7%) rRNA binding (16.6%) tRNA binding (0%)" "IPR023575 (25.1%) IPR002222 (25%) IPR005732 (25%)" "Small ribosomal subunit protein uS19, superfamily (25.1%) Small ribosomal subunit protein uS19 (25%) Small ribosomal subunit protein uS19, bacteria (25%)" VMVSGTGHTGK Bacteria Bacteria GO:0005829 (100%) cytosol (100%) IPR017704 (100%) Putative selenium-binding protein YdfZ (100%) SLSGILNLGGTILGTSR Bacteria Bacteria 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (8.3%) GO:0030388 (8.3%) GO:0061621 (8.3%)" "GO:0005945 (8.3%) GO:0016020 (0.2%)" "GO:0003872 (8.5%) GO:0046872 (8.5%) GO:0005524 (8.3%)" "fructose 6-phosphate metabolic process (8.3%) fructose 1,6-bisphosphate metabolic process (8.3%) canonical glycolysis (8.3%)" "6-phosphofructokinase complex (8.3%) membrane (0.2%)" "6-phosphofructokinase activity (8.5%) metal ion binding (8.5%) ATP binding (8.3%)" "IPR000023 (20.6%) IPR035966 (20.6%) IPR012003 (20.2%)" "Phosphofructokinase domain (20.6%) Phosphofructokinase superfamily (20.6%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (20.2%)" MDKNISFTLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.99.1 (65%) 1.3.5.1 (30%) 1.3.5.4 (5%)" "Deleted entry (65%) succinate dehydrogenase (30%) Transferred entry: 1.3.5.1 (5%)" "GO:0009060 (24.2%) GO:0022904 (24.2%)" "GO:0009055 (24.2%) GO:0051537 (24.2%) GO:0016491 (2.6%)" "aerobic respiration (24.2%) respiratory electron transport chain (24.2%)" "electron transfer activity (24.2%) 2 iron, 2 sulfur cluster binding (24.2%) oxidoreductase activity (2.6%)" "IPR006058 (14.3%) IPR009051 (14.3%) IPR012675 (14.3%)" "2Fe-2S ferredoxin, iron-sulphur binding site (14.3%) Alpha-helical ferredoxin (14.3%) Beta-grasp domain superfamily (14.3%)" NHFASEYIYNAYKDEK root "1.1.1.1 (51.9%) 1.2.1.10 (47.9%) 1.-.-.- (0.2%)" "alcohol dehydrogenase (51.9%) acetaldehyde dehydrogenase (acetylating) (47.9%) Oxidoreductases (0.2%)" "GO:0015976 (15.8%) GO:0006066 (15.8%) GO:0006115 (0%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0046872 (19.8%) GO:0008774 (18.4%) GO:0004022 (17.9%)" "carbon utilization (15.8%) alcohol metabolic process (15.8%) ethanol biosynthetic process (0%)" "cytosol (0%) membrane (0%)" "metal ion binding (19.8%) acetaldehyde dehydrogenase (acetylating) activity (18.4%) alcohol dehydrogenase (NAD+) activity (17.9%)" "IPR016161 (12.1%) IPR016162 (12.1%) IPR015590 (12%)" "Aldehyde/histidinol dehydrogenase (12.1%) Aldehyde dehydrogenase, N-terminal (12.1%) Aldehyde dehydrogenase domain (12%)" AGPLAGYPVVDMGIR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0032790 (17.1%) GO:0006414 (0.1%)" "GO:0005737 (14.7%) GO:0005829 (0.1%)" "GO:0003746 (17.9%) GO:0005525 (17.2%) GO:0003924 (16%)" "ribosome disassembly (17.1%) translational elongation (0.1%)" "cytoplasm (14.7%) cytosol (0.1%)" "translation elongation factor activity (17.9%) GTP binding (17.2%) GTPase activity (16%)" "IPR005517 (6.6%) IPR014721 (6.6%) IPR020568 (6.6%)" "Translation elongation factor EFG/EF2, domain IV (6.6%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.6%) Ribosomal protein uS5 domain 2-type superfamily (6.6%)" SPNSPTLIKPNAPAKPGEEGDAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.3%) IPR000795 (8.3%) IPR004161 (8.3%)" "Translation initiation factor IF-2, bacterial-like (8.3%) Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" MIIGGGSAYSR Bacteria Bacteria 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15%) GO:0035999 (15%) GO:0032259 (12.3%)" "GO:0005829 (15%) GO:0005737 (0.1%)" "GO:0004372 (15%) GO:0030170 (15%) GO:0008168 (12.3%)" "glycine biosynthetic process from serine (15%) tetrahydrofolate interconversion (15%) methylation (12.3%)" "cytosol (15%) cytoplasm (0.1%)" "glycine hydroxymethyltransferase activity (15%) pyridoxal phosphate binding (15%) methyltransferase activity (12.3%)" "IPR001085 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Serine hydroxymethyltransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" LGNTYPEITQMQTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0016301 (25.2%) GO:0050242 (25.2%) GO:0046872 (24.9%)" "kinase activity (25.2%) pyruvate, phosphate dikinase activity (25.2%) metal ion binding (24.9%)" "IPR000121 (10.1%) IPR010121 (10.1%) IPR015813 (10.1%)" "PEP-utilising enzyme, C-terminal (10.1%) Pyruvate, phosphate dikinase (10.1%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (10.1%)" LMEAVANQGK Bacteroidota Bacteria Pseudomonadati Bacteroidota "5.4.2.11 (99.3%) 5.4.2.1 (0.7%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (99.3%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.7%)" "GO:0006096 (33.5%) GO:0006094 (33%)" "GO:0004619 (32.7%) GO:0016868 (0.8%)" "glycolytic process (33.5%) gluconeogenesis (33%)" "phosphoglycerate mutase activity (32.7%) intramolecular phosphotransferase activity (0.8%)" "IPR005952 (25.3%) IPR029033 (25.3%) IPR013078 (25.1%)" "Phosphoglycerate mutase 1 (25.3%) Histidine phosphatase superfamily (25.3%) Histidine phosphatase superfamily, clade-1 (25.1%)" VIINYPKKEEEKLIIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR011703 (25%) IPR027417 (25%) IPR041628 (25%)" "ATPase, AAA-3 (25%) P-loop containing nucleoside triphosphate hydrolase (25%) ChlI/MoxR, AAA lid domain (25%)" DFPVPLIHLWQEDKGFR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016740 (100%) transferase activity (100%) "IPR001173 (25%) IPR027791 (25%) IPR029044 (25%)" "Glycosyltransferase 2-like (25%) Galactosyltransferase, C-terminal (25%) Nucleotide-diphospho-sugar transferases (25%)" EALSSIGIQGLTVTEVK root 2.1.1.- (100%) Methyltransferases (100%) "GO:0006808 (24.9%) GO:0032259 (0%) GO:0045848 (0%)" "GO:0005829 (24.8%) GO:0005886 (0.2%)" "GO:0030234 (24.9%) GO:0005524 (24.8%) GO:0046872 (0.1%)" "regulation of nitrogen utilization (24.9%) methylation (0%) positive regulation of nitrogen utilization (0%)" "cytosol (24.8%) plasma membrane (0.2%)" "enzyme regulator activity (24.9%) ATP binding (24.8%) metal ion binding (0.1%)" "IPR002187 (20.2%) IPR011322 (20.2%) IPR015867 (20.2%)" "Nitrogen regulatory protein PII (20.2%) Nitrogen regulatory PII-like, alpha/beta (20.2%) Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal (20.2%)" MTFAIEYLDEQLSHIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006415 (33.3%) GO:0005737 (33.3%) GO:0043023 (33.3%) translational termination (33.3%) cytoplasm (33.3%) ribosomal large subunit binding (33.3%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" IDFVLHSIGMSPNVR Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.3.1.9 (99.6%) 1.3.1.10 (0.4%)" "enoyl-[acyl-carrier-protein] reductase (NADH) (99.6%) enoyl-[acyl-carrier-protein] reductase (NADPH, Si-specific) (0.4%)" "GO:0006633 (49.7%) GO:0032259 (0.2%)" "GO:0004318 (49.7%) GO:0008168 (0.2%) GO:0141148 (0.2%)" "fatty acid biosynthetic process (49.7%) methylation (0.2%)" "enoyl-[acyl-carrier-protein] reductase (NADH) activity (49.7%) methyltransferase activity (0.2%) enoyl-[acyl-carrier-protein] reductase (NADPH) activity (0.2%)" "IPR002347 (33.4%) IPR014358 (33.4%) IPR036291 (33.2%)" "Short-chain dehydrogenase/reductase SDR (33.4%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.4%) NAD(P)-binding domain superfamily (33.2%)" SIGQFNLTGIAPARR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005524 (33.6%) GO:0140662 (33.6%) GO:0051082 (32.7%)" "ATP binding (33.6%) ATP-dependent protein folding chaperone (33.6%) unfolded protein binding (32.7%)" "IPR013126 (16.8%) IPR029047 (16.8%) IPR029048 (16.8%)" "Heat shock protein 70 family (16.8%) Heat shock protein 70kD, peptide-binding domain superfamily (16.8%) Heat shock protein 70kD, C-terminal domain superfamily (16.8%)" ITIDGEKVIEADSLIIATGATAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.8.1.9 (100%) thioredoxin-disulfide reductase (NADPH) (100%) GO:0019430 (33.3%) GO:0005737 (33.3%) GO:0004791 (33.3%) removal of superoxide radicals (33.3%) cytoplasm (33.3%) thioredoxin-disulfide reductase (NADPH) activity (33.3%) "IPR005982 (20%) IPR008255 (20%) IPR023753 (20%)" "Thioredoxin reductase (20%) Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (20%) FAD/NAD(P)-binding domain (20%)" QAAVAQQAAQAIAEER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (1.4%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (1.4%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" VAPDFELVKSDLSSFALKDLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" MNYNVDDSYVGEAMAYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" VCEYLGIKPEGLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" VYLTAAGGIAPTIAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.8.3.- (80%) 3.1.2.1 (20%)" "CoA-transferases (80%) acetyl-CoA hydrolase (20%)" "GO:0006083 (25.3%) GO:0006084 (24%)" "GO:0003986 (25.3%) GO:0008775 (25.3%)" "acetate metabolic process (25.3%) acetyl-CoA metabolic process (24%)" "acetyl-CoA hydrolase activity (25.3%) acetate CoA-transferase activity (25.3%)" "IPR003702 (17.1%) IPR037171 (17.1%) IPR046433 (17.1%)" "Acetyl-CoA hydrolase/transferase, N-terminal (17.1%) NagB/RpiA transferase-like (17.1%) Acetyl-CoA hydrolase/transferase (17.1%)" VGEEKGYTYIIDPAALLYTGTNAVDATPFVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" GILLGGVPGVKPAK Bacteria Bacteria 1.4.1.1 (100%) alanine dehydrogenase (100%) "GO:0042853 (25.2%) GO:0006524 (0.5%)" GO:0005886 (25.2%) "GO:0000286 (25.5%) GO:0000166 (22.7%) GO:0046872 (0.7%)" "L-alanine catabolic process (25.2%) alanine catabolic process (0.5%)" plasma membrane (25.2%) "alanine dehydrogenase activity (25.5%) nucleotide binding (22.7%) metal ion binding (0.7%)" "IPR007698 (19.6%) IPR007886 (19.6%) IPR036291 (19.6%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (19.6%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (19.6%) NAD(P)-binding domain superfamily (19.6%)" LSGSVTVGETPVIR root "2.7.1.199 (81.8%) 2.7.1.- (6.1%) 2.7.1.191 (3%)" "protein-N(pi)-phosphohistidine--D-glucose phosphotransferase (81.8%) Phosphotransferases with an alcohol group as acceptor (6.1%) protein-N(pi)-phosphohistidine--D-mannose phosphotransferase (3%)" "GO:0009401 (33%) GO:0034763 (0.1%) GO:0043610 (0.1%)" "GO:0005737 (32.8%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0016301 (33%) GO:0046872 (0.4%) GO:0016740 (0.3%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (33%) negative regulation of transmembrane transport (0.1%) regulation of carbohydrate utilization (0.1%)" "cytoplasm (32.8%) cytosol (0.1%) membrane (0.1%)" "kinase activity (33%) metal ion binding (0.4%) transferase activity (0.3%)" "IPR011055 (33.3%) IPR001127 (33.2%) IPR050890 (33.2%)" "Duplicated hybrid motif (33.3%) Phosphotransferase system, sugar-specific permease EIIA type 1 (33.2%) Phosphotransferase system EIIA component (33.2%)" NYLSYGDYPMFDLGEVESYKIPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0030313 (33.3%) "GO:0008901 (33.3%) GO:0016151 (33.3%)" cell envelope (33.3%) "ferredoxin hydrogenase activity (33.3%) nickel cation binding (33.3%)" "IPR001501 (25%) IPR018194 (25%) IPR029014 (25%)" "Nickel-dependent hydrogenase, large subunit (25%) Nickel-dependent hydrogenase, large subunit, nickel binding site (25%) [NiFe]-hydrogenase, large subunit (25%)" AVGSIIESSLDKGR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0005737 (24.8%) "GO:0003743 (24.8%) GO:0003924 (24.8%) GO:0005525 (24.8%)" cytoplasm (24.8%) "translation initiation factor activity (24.8%) GTPase activity (24.8%) GTP binding (24.8%)" "IPR000178 (8.3%) IPR000795 (8.3%) IPR004161 (8.3%)" "Translation initiation factor IF-2, bacterial-like (8.3%) Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" LFYQINVANAYLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" VIASTQPAQTTVYLEQPEAIDYKR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "3.5.4.1 (98.3%) 3.5.4.- (1.7%)" "cytosine deaminase (98.3%) In cyclic amidines (1.7%)" GO:0006209 (25%) GO:0005829 (0.3%) "GO:0004131 (25.3%) GO:0035888 (25%) GO:0046872 (22.5%)" cytosine catabolic process (25%) cytosol (0.3%) "cytosine deaminase activity (25.3%) isoguanine deaminase activity (25%) metal ion binding (22.5%)" "IPR011059 (25.9%) IPR013108 (25.1%) IPR052349 (25.1%)" "Metal-dependent hydrolase, composite domain superfamily (25.9%) Amidohydrolase 3 (25.1%) Metallo-dependent Hydrolases Superfamily Enzymes (25.1%)" EAVEDSGMDLEKEDLNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" IVNAYEAWEEAEQK Bacteria Bacteria "GO:0006364 (0.1%) GO:0006508 (0.1%)" GO:0005829 (48.1%) "GO:0005524 (48.4%) GO:0016787 (3%) GO:0004222 (0.1%)" "rRNA processing (0.1%) proteolysis (0.1%)" cytosol (48.1%) "ATP binding (48.4%) hydrolase activity (3%) metalloendopeptidase activity (0.1%)" "IPR003714 (33.3%) IPR051451 (33.3%) IPR027417 (33.2%)" "PhoH-like protein (33.3%) PhoH2-like (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.2%)" IIAEANAQKDTILKDAEAEAKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IVSVGPDRDQTIER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (15.3%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (15.3%)" "IPR001114 (14.3%) IPR018220 (14.3%) IPR027417 (14.3%)" "Adenylosuccinate synthetase (14.3%) Adenylosuccinate synthase, GTP-binding site (14.3%) P-loop containing nucleoside triphosphate hydrolase (14.3%)" KEGYEQIAAIFTETADQEKEHAK Pseudomonadati Bacteria Pseudomonadati "1.11.1.1 (50%) 1.14.13.81 (50%)" "NADH peroxidase (50%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (50%)" "GO:0005506 (50%) GO:0016491 (49.4%) GO:0048529 (0.6%)" "iron ion binding (50%) oxidoreductase activity (49.4%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity (0.6%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" ESGFDGELADLTDDILIYHLK root "GO:0005737 (25%) GO:0005829 (25%)" "GO:0004674 (25%) GO:0016491 (25%)" "cytoplasm (25%) cytosol (25%)" "protein serine/threonine kinase activity (25%) oxidoreductase activity (25%)" "IPR009383 (48.3%) IPR038134 (48.3%) IPR001853 (0.4%)" "Protein of unknown function DUF1040 (48.3%) YihD-like superfamily (48.3%) DSBA-like thioredoxin domain (0.4%)" GYISPYFVTNTEKMECEMENPYILIYDKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (19.7%) GO:0005737 (11.1%) "GO:0005524 (19.7%) GO:0140662 (19.7%) GO:0016853 (18.8%)" protein refolding (19.7%) cytoplasm (11.1%) "ATP binding (19.7%) ATP-dependent protein folding chaperone (19.7%) isomerase activity (18.8%)" "IPR001844 (18.1%) IPR002423 (18.1%) IPR027409 (18.1%)" "Chaperonin Cpn60/GroEL (18.1%) Chaperonin Cpn60/GroEL/TCP-1 family (18.1%) GroEL-like apical domain superfamily (18.1%)" NALAFIQSVTSNDASVLPLGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (16.7%) GO:0032259 (8.3%)" "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004047 (16.7%) GO:0008483 (16.7%) GO:0008168 (8.3%)" "glycine decarboxylation via glycine cleavage system (16.7%) methylation (8.3%)" "cytosol (16.7%) glycine cleavage complex (16.7%)" "aminomethyltransferase activity (16.7%) transaminase activity (16.7%) methyltransferase activity (8.3%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" VVAVVGGGDTACEEAIYLAGLASK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.8.1.9 (97.4%) 4.3.1.9 (2.6%)" "thioredoxin-disulfide reductase (NADPH) (97.4%) glucosaminate ammonia-lyase (2.6%)" "GO:0019430 (32.7%) GO:0045454 (0.9%)" GO:0005737 (32.7%) "GO:0004791 (32.7%) GO:0047930 (0.9%)" "removal of superoxide radicals (32.7%) cell redox homeostasis (0.9%)" cytoplasm (32.7%) "thioredoxin-disulfide reductase (NADPH) activity (32.7%) glucosaminate ammonia-lyase activity (0.9%)" "IPR005982 (20%) IPR008255 (20%) IPR023753 (20%)" "Thioredoxin reductase (20%) Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (20%) FAD/NAD(P)-binding domain (20%)" GYFYGNLDAMFDQIHGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (24.8%) GO:0005829 (24.8%) "GO:0003937 (24.8%) GO:0004643 (24.8%) GO:0016740 (0.4%)" 'de novo' IMP biosynthetic process (24.8%) cytosol (24.8%) "IMP cyclohydrolase activity (24.8%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (24.8%) transferase activity (0.4%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" CDMVEDAEMLELVEMEMR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20.6%) "GO:0003746 (20.6%) GO:0003924 (20.6%) GO:0005525 (20.6%)" cytosol (20.6%) "translation elongation factor activity (20.6%) GTPase activity (20.6%) GTP binding (20.6%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" VNLMDAASEDSDTPVTFGKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.1.13 (100%) glutamate synthase (NADPH) (100%) "GO:0051536 (49.4%) GO:0016491 (38.3%) GO:0004355 (12.3%)" "iron-sulfur cluster binding (49.4%) oxidoreductase activity (38.3%) glutamate synthase (NADPH) activity (12.3%)" "IPR023753 (10.3%) IPR036188 (10.3%) IPR009051 (10%)" "FAD/NAD(P)-binding domain (10.3%) FAD/NAD(P)-binding domain superfamily (10.3%) Alpha-helical ferredoxin (10%)" MYVVGETTNDMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" LQELKDELGDNLYIAQLDVR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.1.1.298 (49.5%) 1.1.1.381 (49.5%) 1.1.1.- (1%)" "3-hydroxypropionate dehydrogenase (NADP(+)) (49.5%) 3-hydroxy acid dehydrogenase (49.5%) With NAD(+) or NADP(+) as acceptor (1%)" "GO:0006212 (0.5%) GO:0051289 (0.5%)" "GO:0005829 (46.8%) GO:0032991 (0.5%)" "GO:0016616 (27.5%) GO:0035527 (18.3%) GO:0016491 (2.8%)" "uracil catabolic process (0.5%) protein homotetramerization (0.5%)" "cytosol (46.8%) protein-containing complex (0.5%)" "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (27.5%) 3-hydroxypropionate dehydrogenase (NADP+) activity (18.3%) oxidoreductase activity (2.8%)" "IPR002347 (33.8%) IPR036291 (33.8%) IPR020904 (32.5%)" "Short-chain dehydrogenase/reductase SDR (33.8%) NAD(P)-binding domain superfamily (33.8%) Short-chain dehydrogenase/reductase, conserved site (32.5%)" TTAIAGGEPIPYQIGDKVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (16.7%) "GO:0000287 (16.7%) GO:0004743 (16.7%) GO:0005524 (16.7%)" response to stress (16.7%) "magnesium ion binding (16.7%) pyruvate kinase activity (16.7%) ATP binding (16.7%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" GPDTTEYYLLTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" ASLSGTQTIK root 3.6.1.15 (100%) nucleoside-triphosphate phosphatase (100%) "GO:0034605 (17%) GO:0042026 (15.7%) GO:0006508 (0.4%)" "GO:0005829 (15.3%) GO:0005737 (1.7%) GO:0005759 (0%)" "GO:0005524 (17%) GO:0016887 (17%) GO:0042802 (15.3%)" "cellular response to heat (17%) protein refolding (15.7%) proteolysis (0.4%)" "cytosol (15.3%) cytoplasm (1.7%) mitochondrial matrix (0%)" "ATP binding (17%) ATP hydrolysis activity (17%) identical protein binding (15.3%)" "IPR027417 (8.6%) IPR050130 (8.6%) IPR041546 (8.6%)" "P-loop containing nucleoside triphosphate hydrolase (8.6%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%) ClpA/ClpB, AAA lid domain (8.6%)" LGDNAEMCFIELVDYDENMAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.3%) IPR036373 (33.3%) IPR047859 (33.3%)" "Large ribosomal subunit protein bL17 (33.3%) Large ribosomal subunit protein bL17 superfamily (33.3%) Large ribosomal subunit protein bL17, conserved site (33.3%)" GKQFGIINISK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" KVINAATDVAHAATLSDEDVAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.24.- (100%) Metalloendopeptidases (100%) GO:0051603 (25%) GO:0016020 (25%) "GO:0004222 (25%) GO:0046872 (25%)" proteolysis involved in protein catabolic process (25%) membrane (25%) "metalloendopeptidase activity (25%) metal ion binding (25%)" "IPR001915 (50%) IPR051156 (50%)" "Peptidase M48 (50%) Mitochondrial and Outer Membrane Metalloprotease (50%)" FLSDELQPGESVGIDGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0005737 (32.6%) "GO:0046872 (32.6%) GO:0070006 (32.6%) GO:0004177 (2.3%)" cytoplasm (32.6%) "metal ion binding (32.6%) metalloaminopeptidase activity (32.6%) aminopeptidase activity (2.3%)" "IPR000587 (14.3%) IPR000994 (14.3%) IPR029149 (14.3%)" "Creatinase, N-terminal (14.3%) Peptidase M24 (14.3%) Creatinase/Aminopeptidase P/Spt16, N-terminal (14.3%)" YWAIPGTEGFAHR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.2.-.- (100%) Acting on the aldehyde or oxo group of donors (100%) GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.5%) IPR002880 (12.5%) IPR009014 (12.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" TGCDSLAISIGTSHGAYKFTPEQCTIDPVTGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.4%) GO:0030388 (24.4%)" GO:0016020 (2.4%) "GO:0004332 (24.4%) GO:0008270 (24.4%)" "glycolytic process (24.4%) fructose 1,6-bisphosphate metabolic process (24.4%)" membrane (2.4%) "fructose-bisphosphate aldolase activity (24.4%) zinc ion binding (24.4%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" LFTDMCEGLPEKR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "2.3.1.- (91.7%) 2.3.1.18 (8.3%)" "Transferring groups other than amino-acyl groups (91.7%) galactoside O-acetyltransferase (8.3%)" GO:0005989 (0.6%) GO:0005737 (0.6%) "GO:0008870 (76.8%) GO:0016407 (19.2%) GO:0016746 (1.1%)" lactose biosynthetic process (0.6%) cytoplasm (0.6%) "galactoside O-acetyltransferase activity (76.8%) acetyltransferase activity (19.2%) acyltransferase activity (1.1%)" "IPR024688 (25.3%) IPR039369 (19.5%) IPR011004 (19.2%)" "Maltose/galactoside acetyltransferase domain (25.3%) Galactoside O-acetyltransferase LacA-like (19.5%) Trimeric LpxA-like superfamily (19.2%)" AKFESLAHNLIQACLEPCKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0005524 (33.3%) GO:0051082 (33.3%) GO:0140662 (33.3%)" "ATP binding (33.3%) unfolded protein binding (33.3%) ATP-dependent protein folding chaperone (33.3%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" MVQLTDEVLSEHYAHLSSKPFFQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.4.6 (100%) nucleoside-diphosphate kinase (100%) "GO:0006183 (16.7%) GO:0006228 (16.7%) GO:0006241 (16.7%)" "GO:0004550 (16.7%) GO:0005524 (16.7%) GO:0046872 (16.7%)" "GTP biosynthetic process (16.7%) UTP biosynthetic process (16.7%) CTP biosynthetic process (16.7%)" "nucleoside diphosphate kinase activity (16.7%) ATP binding (16.7%) metal ion binding (16.7%)" "IPR001564 (25%) IPR023005 (25%) IPR034907 (25%)" "Nucleoside diphosphate kinase (25%) Nucleoside diphosphate kinase, active site (25%) Nucleoside diphosphate kinase-like domain (25%)" KHSHQQPAKPAAQPAA Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0010447 (0.8%) "GO:0042597 (98.3%) GO:0030288 (0.8%)" response to acidic pH (0.8%) "periplasmic space (98.3%) outer membrane-bounded periplasmic space (0.8%)" IPR023497 (100%) Acid shock protein (100%) IQEIPGVTATETLISLEQSIKK Pseudomonadati Bacteria Pseudomonadati GO:0043200 (25.5%) GO:0005829 (25.5%) GO:0043565 (49%) response to amino acid (25.5%) cytosol (25.5%) sequence-specific DNA binding (49%) "IPR011008 (15.9%) IPR019887 (15.9%) IPR000485 (15.2%)" "Dimeric alpha-beta barrel (15.9%) Transcription regulator AsnC/Lrp, ligand binding domain (15.9%) AsnC-type HTH domain (15.2%)" SKEFVAVNDEAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" QVAMQVAAMNPIAVDEDGVSEEVKQKEIEVAVEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" TGVITQTCR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.4 (100%) sulfate adenylyltransferase (100%) "GO:0000103 (16.7%) GO:0070814 (16.7%)" "GO:0003924 (16.7%) GO:0004781 (16.7%) GO:0005524 (16.7%)" "sulfate assimilation (16.7%) hydrogen sulfide biosynthetic process (16.7%)" "GTPase activity (16.7%) sulfate adenylyltransferase (ATP) activity (16.7%) ATP binding (16.7%)" "IPR000795 (9.1%) IPR009000 (9.1%) IPR009001 (9.1%)" "Translational (tr)-type GTP-binding domain (9.1%) Translation protein, beta-barrel domain superfamily (9.1%) Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (9.1%)" IDKNQQINIYNTAEFMK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0009279 (33.3%) "GO:0015288 (33.3%) GO:0030247 (33.3%)" cell outer membrane (33.3%) "porin activity (33.3%) polysaccharide binding (33.3%)" "IPR006665 (25%) IPR006690 (25%) IPR036737 (25%)" "OmpA-like domain (25%) Outer membrane protein, OmpA-like, conserved site (25%) OmpA-like domain superfamily (25%)" GITISTAHVEYETPNR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0070125 (2%) "GO:0005829 (14.5%) GO:0032045 (5.8%) GO:0005739 (2%)" "GO:0003746 (18.2%) GO:0003924 (18.2%) GO:0005525 (18.2%)" mitochondrial translational elongation (2%) "cytosol (14.5%) guanyl-nucleotide exchange factor complex (5.8%) mitochondrion (2%)" "translation elongation factor activity (18.2%) GTPase activity (18.2%) GTP binding (18.2%)" "IPR000795 (8.7%) IPR031157 (8.7%) IPR050055 (8.7%)" "Translational (tr)-type GTP-binding domain (8.7%) Tr-type G domain, conserved site (8.7%) Elongation factor Tu GTPase (8.7%)" WNEVDADVVVESTGFFLTDETAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.1.- (96.2%) 1.2.1.12 (3.8%)" "With NAD(+) or NADP(+) as acceptor (96.2%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (3.8%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (10.7%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (10.7%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" GVDKNEIKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0006414 (0.7%) "GO:0005829 (19.3%) GO:0005737 (0.7%) GO:0032045 (0.7%)" "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" translational elongation (0.7%) "cytosol (19.3%) cytoplasm (0.7%) guanyl-nucleotide exchange factor complex (0.7%)" "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" ALVLTDKYFEGKVPAAGELTDYDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004825 (16.7%) GO:0005524 (16.7%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) methionine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR001412 (8.3%) IPR002547 (8.3%) IPR004495 (8.3%)" "Aminoacyl-tRNA synthetase, class I, conserved site (8.3%) tRNA-binding domain (8.3%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.3%)" NTHFQTVHGLDADGQYSSAR root "3.4.16.4 (99.8%) 3.5.2.6 (0.2%)" "serine-type D-Ala-D-Ala carboxypeptidase (99.8%) beta-lactamase (0.2%)" "GO:0006508 (11.4%) GO:0008360 (11.2%) GO:0071555 (11.2%)" "GO:0005886 (11.2%) GO:0030288 (10.6%)" "GO:0009002 (11.4%) GO:0008658 (10.9%) GO:0042803 (10.6%)" "proteolysis (11.4%) regulation of cell shape (11.2%) cell wall organization (11.2%)" "plasma membrane (11.2%) outer membrane-bounded periplasmic space (10.6%)" "serine-type D-Ala-D-Ala carboxypeptidase activity (11.4%) penicillin binding (10.9%) protein homodimerization activity (10.6%)" "IPR001967 (17.1%) IPR012338 (17.1%) IPR018044 (16.8%)" "Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal (17.1%) Beta-lactamase/transpeptidase-like (17.1%) Peptidase S11, D-alanyl-D-alanine carboxypeptidase A (16.8%)" TSKTEYISCPGCGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.17.7.3 (95.6%) 1.17.7.1 (4.4%)" "(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (95.6%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) (4.4%)" "GO:0016114 (17.5%) GO:0019288 (17.5%)" "GO:0046429 (17.5%) GO:0051539 (17.5%) GO:0005506 (16.8%)" "terpenoid biosynthetic process (17.5%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.5%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.5%) 4 iron, 4 sulfur cluster binding (17.5%) iron ion binding (16.8%)" "IPR004588 (25.6%) IPR045854 (25.2%) IPR011005 (24.7%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25.6%) Nitrite and sulphite reductase 4Fe-4S domain-like superfamily (25.2%) Dihydropteroate synthase-like superfamily (24.7%)" YGNNPGEFASWGNK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0044718 (33.3%) GO:0009279 (33.3%) GO:0015344 (33.3%) siderophore transmembrane transport (33.3%) cell outer membrane (33.3%) siderophore uptake transmembrane transporter activity (33.3%) "IPR000531 (11.2%) IPR012910 (11.2%) IPR023996 (11.2%)" "TonB-dependent receptor-like, beta-barrel (11.2%) TonB-dependent receptor, plug domain (11.2%) TonB-dependent outer membrane protein, SusC/RagA (11.2%)" SQAMVPEDCIVINNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016787 (100%) hydrolase activity (100%) "IPR001453 (14.3%) IPR008135 (14.3%) IPR008136 (14.3%)" "MoaB/Mog domain (14.3%) Competence-induced protein CinA (14.3%) CinA, C-terminal (14.3%)" GHPSEIHVASIIASQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.4.2.9 (100%) uracil phosphoribosyltransferase (100%) "GO:0005525 (50%) GO:0016757 (34.4%) GO:0004845 (15.6%)" "GTP binding (50%) glycosyltransferase activity (34.4%) uracil phosphoribosyltransferase activity (15.6%)" "IPR000836 (50%) IPR029057 (50%)" "Phosphoribosyltransferase domain (50%) Phosphoribosyltransferase-like (50%)" AVVEALNNSFDWLQNDRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" KEDKGVIIGQLAETVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" LVKGEVVASTFDEPASR root 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.4%) "GO:0005829 (13.9%) GO:0016020 (0%)" "GO:0003723 (14.4%) GO:0005524 (14.4%) GO:0008186 (14.4%)" DNA-templated transcription termination (14.4%) "cytosol (13.9%) membrane (0%)" "RNA binding (14.4%) ATP binding (14.4%) ATP-dependent activity, acting on RNA (14.4%)" "IPR004665 (10.2%) IPR000194 (10.2%) IPR027417 (10.2%)" "Transcription termination factor Rho (10.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.2%) P-loop containing nucleoside triphosphate hydrolase (10.2%)" VLDGAVATFCAVGGVEPQSETVWR Bacteria Bacteria GO:0032790 (20.1%) GO:0005737 (19.6%) "GO:0003746 (20.1%) GO:0003924 (20.1%) GO:0005525 (20.1%)" ribosome disassembly (20.1%) cytoplasm (19.6%) "translation elongation factor activity (20.1%) GTPase activity (20.1%) GTP binding (20.1%)" "IPR000795 (6.4%) IPR005225 (6.4%) IPR009000 (6.4%)" "Translational (tr)-type GTP-binding domain (6.4%) Small GTP-binding domain (6.4%) Translation protein, beta-barrel domain superfamily (6.4%)" IIIEAEGVSYEIAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0022625 (20%) GO:0005840 (0.3%)" "GO:0003735 (20%) GO:0019843 (20%) GO:0000049 (19.7%)" translation (20%) "cytosolic large ribosomal subunit (20%) ribosome (0.3%)" "structural constituent of ribosome (20%) rRNA binding (20%) tRNA binding (19.7%)" "IPR000114 (20%) IPR016180 (20%) IPR020798 (20%)" "Large ribosomal subunit protein uL16, bacteria (20%) Large ribosomal subunit protein uL16 domain (20%) Large ribosomal subunit protein uL16, conserved site (20%)" ELLSFLPQNNMDEAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0015977 (22.1%) GO:0009317 (22.1%) "GO:0003989 (22.1%) GO:0004658 (22.1%) GO:0016740 (11.5%)" carbon fixation (22.1%) acetyl-CoA carboxylase complex (22.1%) "acetyl-CoA carboxylase activity (22.1%) propionyl-CoA carboxylase activity (22.1%) transferase activity (11.5%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" GYEFTDEDPQKNYPDQLDEYRK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.1.3.1 (100%) methylmalonyl-CoA carboxytransferase (100%) GO:0006094 (2.9%) GO:0005737 (2.9%) "GO:0003824 (71.4%) GO:0047154 (20%) GO:0004736 (2.9%)" gluconeogenesis (2.9%) cytoplasm (2.9%) "catalytic activity (71.4%) methylmalonyl-CoA carboxytransferase activity (20%) pyruvate carboxylase activity (2.9%)" "IPR000891 (23.1%) IPR003379 (23.1%) IPR013785 (23.1%)" "Pyruvate carboxyltransferase (23.1%) Carboxylase, conserved domain (23.1%) Aldolase-type TIM barrel (23.1%)" ISNIEISAYASPDGGVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (47.8%) IPR019734 (47.8%) IPR013105 (4.3%)" "Tetratricopeptide-like helical domain superfamily (47.8%) Tetratricopeptide repeat (47.8%) Tetratricopeptide repeat 2 (4.3%)" NVAPDSNTETYVAMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.49 (100%) glucose-6-phosphate dehydrogenase (NADP(+)) (100%) "GO:0006006 (20%) GO:0009051 (20%)" GO:0005829 (20%) "GO:0004345 (20%) GO:0050661 (20%)" "glucose metabolic process (20%) pentose-phosphate shunt, oxidative branch (20%)" cytosol (20%) "glucose-6-phosphate dehydrogenase activity (20%) NADP binding (20%)" "IPR001282 (20%) IPR019796 (20%) IPR022674 (20%)" "Glucose-6-phosphate dehydrogenase (20%) Glucose-6-phosphate dehydrogenase, active site (20%) Glucose-6-phosphate dehydrogenase, NAD-binding (20%)" NLVYTPHIYVVDLNIDGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" FLKEVCLLNQEDIMDGKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (48.1%) GO:0003746 (51.9%) cytoplasm (48.1%) translation elongation factor activity (51.9%) "IPR001816 (20.1%) IPR014039 (20.1%) IPR036402 (20.1%)" "Translation elongation factor EFTs/EF1B (20.1%) Translation elongation factor EFTs/EF1B, dimerisation (20.1%) Elongation factor Ts, dimerisation domain superfamily (20.1%)" KVSAAGLDVYEEEGDYFYEDKSDKIIDDDVLAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.28 (100%) D-lactate dehydrogenase (100%) "GO:0008720 (47.8%) GO:0051287 (47.8%) GO:0016787 (4.3%)" "D-lactate dehydrogenase (NAD+) activity (47.8%) NAD binding (47.8%) hydrolase activity (4.3%)" "IPR006139 (25%) IPR006140 (25%) IPR029753 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (25%)" QMSAEELEAALKEIIAEVGATSGKDMGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0016884 (92.3%) GO:0016740 (7.7%)" "carbon-nitrogen ligase activity, with glutamine as amido-N-donor (92.3%) transferase activity (7.7%)" "IPR003789 (25%) IPR019004 (25%) IPR023168 (25%)" "Aspartyl/glutamyl-tRNA amidotransferase subunit B-like (25%) Uncharacterised protein YqeY/Aim41 (25%) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 (25%)" LINYLVEEFKKEQGVDLR Providencia Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Morganellaceae Providencia "GO:0005524 (25%) GO:0051082 (25%) GO:0051087 (25%)" "ATP binding (25%) unfolded protein binding (25%) protein-folding chaperone binding (25%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" AATEGTIPLIPGISTVSELMLGMDYGLK root "4.1.2.14 (50.4%) 4.1.3.42 (44.1%) 4.1.3.16 (5.1%)" "2-dehydro-3-deoxy-phosphogluconate aldolase (50.4%) (4S)-4-hydroxy-2-oxoglutarate aldolase (44.1%) 4-hydroxy-2-oxoglutarate aldolase (5.1%)" "GO:0009255 (0.4%) GO:0019521 (0.3%) GO:0009082 (0.1%)" "GO:0005737 (32.2%) GO:0005829 (0.4%) GO:0016020 (0.1%)" "GO:0008675 (23.7%) GO:0008700 (23.6%) GO:0016829 (10.3%)" "Entner-Doudoroff pathway through 6-phosphogluconate (0.4%) D-gluconate metabolic process (0.3%) branched-chain amino acid biosynthetic process (0.1%)" "cytoplasm (32.2%) cytosol (0.4%) membrane (0.1%)" "2-dehydro-3-deoxy-phosphogluconate aldolase activity (23.7%) (R,S)-4-hydroxy-2-oxoglutarate aldolase activity (23.6%) lyase activity (10.3%)" "IPR000887 (24.7%) IPR013785 (24.7%) IPR031338 (24.7%)" "KDPG/KHG aldolase (24.7%) Aldolase-type TIM barrel (24.7%) KDPG/KHG aldolase, active site 2 (24.7%)" AVEEGAVITLSNTPVAVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" AALSNTFGFGGHNACAIVKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" ALVPMVIEQTSRGER Pseudomonadati Bacteria Pseudomonadati 3.4.21.92 (100%) endopeptidase Clp (100%) "GO:0006515 (16.5%) GO:0006508 (0.4%) GO:0009266 (0%)" "GO:0009368 (16.5%) GO:0005737 (16.3%) GO:0005829 (0%)" "GO:0004252 (16.7%) GO:0004176 (16.5%) GO:0051117 (16.5%)" "protein quality control for misfolded or incompletely synthesized proteins (16.5%) proteolysis (0.4%) response to temperature stimulus (0%)" "endopeptidase Clp complex (16.5%) cytoplasm (16.3%) cytosol (0%)" "serine-type endopeptidase activity (16.7%) ATP-dependent peptidase activity (16.5%) ATPase binding (16.5%)" "IPR029045 (20.4%) IPR023562 (20.3%) IPR001907 (20.1%)" "ClpP/crotonase-like domain superfamily (20.4%) Clp protease proteolytic subunit /Translocation-enhancing protein TepA (20.3%) ATP-dependent Clp protease proteolytic subunit (20.1%)" SHEVEHMCVVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006879 (25%) GO:0005737 (25%) "GO:0008198 (25%) GO:0051537 (25%)" intracellular iron ion homeostasis (25%) cytoplasm (25%) "ferrous iron binding (25%) 2 iron, 2 sulfur cluster binding (25%)" GMIAEIKPNGTGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10.2%) IPR006203 (10.2%) IPR006204 (10.2%)" "Galactokinase (10.2%) GHMP kinase, ATP-binding, conserved site (10.2%) GHMP kinase N-terminal domain (10.2%)" YTAGFVHQVIHDTYLKDHEAPEDIEYYMCGPGPMSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (16.7%) GO:0005886 (16.7%) "GO:0009055 (16.7%) GO:0016655 (16.7%) GO:0046872 (16.7%)" sodium ion transport (16.7%) plasma membrane (16.7%) "electron transfer activity (16.7%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (16.7%) metal ion binding (16.7%)" "IPR001041 (10%) IPR001433 (10%) IPR001709 (10%)" "2Fe-2S ferredoxin-type iron-sulfur binding domain (10%) Oxidoreductase FAD/NAD(P)-binding (10%) Flavoprotein pyridine nucleotide cytochrome reductase (10%)" IVKDAGMEILGAAFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.21.107 (57.1%) 3.4.21.- (42.9%)" "peptidase Do (57.1%) Serine endopeptidases (42.9%)" GO:0006508 (49.3%) GO:0042597 (1.3%) GO:0004252 (49.3%) proteolysis (49.3%) periplasmic space (1.3%) serine-type endopeptidase activity (49.3%) "IPR001478 (21.6%) IPR001940 (21.6%) IPR009003 (21.6%)" "PDZ domain (21.6%) Peptidase S1C (21.6%) Peptidase S1, PA clan (21.6%)" TFEEETSNYALHKENGPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" YGGGNENSIHTQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006261 (12.5%) GO:0006265 (12.5%)" "GO:0005694 (12.5%) GO:0005737 (12.5%)" "GO:0003677 (12.5%) GO:0005524 (12.5%) GO:0034335 (12.5%)" "DNA-templated DNA replication (12.5%) DNA topological change (12.5%)" "chromosome (12.5%) cytoplasm (12.5%)" "DNA binding (12.5%) ATP binding (12.5%) DNA negative supercoiling activity (12.5%)" "IPR000565 (7.7%) IPR001241 (7.7%) IPR002288 (7.7%)" "DNA topoisomerase, type IIA, subunit B (7.7%) DNA topoisomerase, type IIA (7.7%) DNA gyrase B subunit, C-terminal (7.7%)" KIPQHLLSEEDPIFAFNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.1.1.23 (100%) orotidine-5'-phosphate decarboxylase (100%) "GO:0006207 (33.3%) GO:0044205 (33.3%)" GO:0004590 (33.3%) "'de novo' pyrimidine nucleobase biosynthetic process (33.3%) 'de novo' UMP biosynthetic process (33.3%)" orotidine-5'-phosphate decarboxylase activity (33.3%) "IPR001754 (25%) IPR011060 (25%) IPR011995 (25%)" "Orotidine 5'-phosphate decarboxylase domain (25%) Ribulose-phosphate binding barrel (25%) Orotidine 5'-phosphate decarboxylase, type 2 (25%)" VVEAYFTDLEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales HLFGELLAEIQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0016787 (50%) GO:0046872 (50%)" "hydrolase activity (50%) metal ion binding (50%)" IPR039461 (100%) Peptidase family M49 (100%) LLNTMEPTAPGTLISNDTEKGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (16.9%) GO:0009090 (16.9%) GO:0009088 (15.3%)" GO:0005829 (16.9%) "GO:0004072 (16.9%) GO:0005524 (16.9%)" "lysine biosynthetic process via diaminopimelate (16.9%) homoserine biosynthetic process (16.9%) threonine biosynthetic process (15.3%)" cytosol (16.9%) "aspartate kinase activity (16.9%) ATP binding (16.9%)" "IPR001048 (12.5%) IPR001341 (12.5%) IPR005260 (12.5%)" "Aspartate/glutamate/uridylate kinase (12.5%) Aspartate kinase (12.5%) Aspartate kinase, monofunctional class (12.5%)" YFNVNKDGTLPPSKEAYVDFPLFR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" VQSALLEAMQER root "3.6.3.- (96.8%) 6.6.1.1 (3.2%)" "Acting on acid anhydrides; catalyzing transmembrane movement of substances (96.8%) magnesium chelatase (3.2%)" GO:0006355 (0.6%) GO:0016020 (0.1%) "GO:0005524 (49.6%) GO:0016887 (49.6%) GO:0004386 (0.1%)" regulation of DNA-templated transcription (0.6%) membrane (0.1%) "ATP binding (49.6%) ATP hydrolysis activity (49.6%) helicase activity (0.1%)" "IPR011703 (24.4%) IPR050764 (24.4%) IPR027417 (24.4%)" "ATPase, AAA-3 (24.4%) CbbQ/NirQ/NorQ/GpvN (24.4%) P-loop containing nucleoside triphosphate hydrolase (24.4%)" FSTDLPEFVAAEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (17.3%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (17.3%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" ACQLYEQAIYFDPNYKEAYLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0051301 (50%) GO:0009579 (50%) cell division (50%) thylakoid (50%) "IPR011990 (37.3%) IPR019734 (37.3%) IPR051685 (25.4%)" "Tetratricopeptide-like helical domain superfamily (37.3%) Tetratricopeptide repeat (37.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (25.4%)" TIANLPMLVQAAK ATEDKNEAQALFPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (20%) "GO:0005829 (20%) GO:0015935 (20%)" "GO:0003735 (20%) GO:0070181 (20%)" translation (20%) "cytosol (20%) small ribosomal subunit (20%)" "structural constituent of ribosome (20%) small ribosomal subunit rRNA binding (20%)" "IPR002583 (50%) IPR036510 (50%)" "Small ribosomal subunit protein bS20 (50%) Small ribosomal subunit protein bS20 superfamily (50%)" IVEFIEKPDQPQTLDSDIMAVGR root 2.7.7.9 (100%) UTP--glucose-1-phosphate uridylyltransferase (100%) "GO:0006011 (21.2%) GO:0009103 (19.1%)" GO:0005829 (19.2%) "GO:0003983 (21.2%) GO:0030234 (19.1%) GO:0016779 (0.2%)" "UDP-alpha-D-glucose metabolic process (21.2%) lipopolysaccharide biosynthetic process (19.1%)" cytosol (19.2%) "UTP:glucose-1-phosphate uridylyltransferase activity (21.2%) enzyme regulator activity (19.1%) nucleotidyltransferase activity (0.2%)" "IPR005771 (25.7%) IPR029044 (25.6%) IPR005835 (25.6%)" "UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type (25.7%) Nucleotide-diphospho-sugar transferases (25.6%) Nucleotidyl transferase domain (25.6%)" IGAEAVYDLLAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) GO:0000428 (17%) "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (16.1%)" DNA-templated transcription (17%) DNA-directed RNA polymerase complex (17%) "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (16.1%)" "IPR000722 (9.4%) IPR006592 (9.4%) IPR007080 (9.4%)" "RNA polymerase, alpha subunit (9.4%) RNA polymerase, N-terminal (9.4%) RNA polymerase Rpb1, domain 1 (9.4%)" TKDFVSMVNNLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.3%) "GO:0005840 (20.3%) GO:1990904 (20.3%)" "GO:0003735 (20.3%) GO:0019843 (17.4%) GO:0003723 (1.4%)" translation (20.3%) "ribosome (20.3%) ribonucleoprotein complex (20.3%)" "structural constituent of ribosome (20.3%) rRNA binding (17.4%) RNA binding (1.4%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" QLSDGTYFTVLLALLAR Selenomonas bovis Bacteria Bacillati Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas Selenomonas bovis 2.7.7.7 (100%) DNA-directed DNA polymerase (100%) GO:0006261 (25%) GO:0009360 (25%) "GO:0003677 (25%) GO:0003887 (25%)" DNA-templated DNA replication (25%) DNA polymerase III complex (25%) "DNA binding (25%) DNA-directed DNA polymerase activity (25%)" "IPR005790 (20%) IPR008921 (20%) IPR010372 (20%)" "DNA polymerase III, delta subunit (20%) DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (20%) DNA polymerase III delta, N-terminal (20%)" GAYTGEVSAAMVASTGAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%) GO:0019563 (16.5%)" "GO:0005829 (16.5%) GO:0016020 (0.3%)" "GO:0004807 (16.5%) GO:0016853 (0.2%)" "gluconeogenesis (16.5%) glycolytic process (16.5%) glycerol catabolic process (16.5%)" "cytosol (16.5%) membrane (0.3%)" "triose-phosphate isomerase activity (16.5%) isomerase activity (0.2%)" "IPR000652 (19.9%) IPR013785 (19.9%) IPR020861 (19.9%)" "Triosephosphate isomerase (19.9%) Aldolase-type TIM barrel (19.9%) Triosephosphate isomerase, active site (19.9%)" LIPLYEESFPESER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016747 (100%) acyltransferase activity, transferring groups other than amino-acyl groups (100%) "IPR000182 (50%) IPR016181 (50%)" "GNAT domain (50%) Acyl-CoA N-acyltransferase (50%)" EKDVNAVLDYMEQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016020 (100%) membrane (100%) "IPR049273 (50%) IPR053996 (50%)" "DUF3829-like, N-terminal domain (50%) DUF3829-like, C-terminal domain (50%)" SIPGSVILQQFENPANTEVHAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.5.1.47 (100%) cysteine synthase (100%) GO:0006535 (50%) GO:0004124 (50%) cysteine biosynthetic process from serine (50%) cysteine synthase activity (50%) "IPR001216 (16.7%) IPR001926 (16.7%) IPR005856 (16.7%)" "Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site (16.7%) Tryptophan synthase beta chain-like, PALP domain (16.7%) Cysteine synthase (16.7%)" NAEQSFAFEVLNDPNIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" EFNVEANVGKPQVAYR root "3.6.5.- (50%) 3.6.5.3 (50%)" "Acting on GTP; involved in cellular and subcellular movement (50%) protein-synthesizing GTPase (50%)" "GO:0032790 (17.2%) GO:0006414 (0%) GO:0070125 (0%)" "GO:0005737 (16.2%) GO:0005829 (0%) GO:0005739 (0%)" "GO:0003746 (17.8%) GO:0005525 (17.5%) GO:0003924 (17%)" "ribosome disassembly (17.2%) translational elongation (0%) mitochondrial translational elongation (0%)" "cytoplasm (16.2%) cytosol (0%) mitochondrion (0%)" "translation elongation factor activity (17.8%) GTP binding (17.5%) GTPase activity (17%)" "IPR035647 (6.4%) IPR005517 (6.4%) IPR014721 (6.4%)" "EF-G domain III/V-like (6.4%) Translation elongation factor EFG/EF2, domain IV (6.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.4%)" NNAGGHANHSLFWK root 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0019430 (0.1%) GO:0006801 (0%) GO:0006979 (0%)" "GO:0005737 (33%) GO:0005829 (0%)" "GO:0004784 (33.1%) GO:0030145 (31%) GO:0046872 (2%)" "removal of superoxide radicals (0.1%) superoxide metabolic process (0%) response to oxidative stress (0%)" "cytoplasm (33%) cytosol (0%)" "superoxide dismutase activity (33.1%) manganese ion binding (31%) metal ion binding (2%)" "IPR036324 (16.8%) IPR001189 (16.8%) IPR036314 (16.7%)" "Manganese/iron superoxide dismutase, N-terminal domain superfamily (16.8%) Manganese/iron superoxide dismutase (16.8%) Manganese/iron superoxide dismutase, C-terminal domain superfamily (16.7%)" FAPTMEWDTAAGHAIAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.1.3.7 (100%) 3'(2'),5'-bisphosphate nucleotidase (100%) "GO:0000103 (18.1%) GO:0050427 (18.1%) GO:0046854 (9.5%)" GO:0005886 (18.1%) "GO:0000287 (18.1%) GO:0008441 (18.1%)" "sulfate assimilation (18.1%) 3'-phosphoadenosine 5'-phosphosulfate metabolic process (18.1%) phosphatidylinositol phosphate biosynthetic process (9.5%)" plasma membrane (18.1%) "magnesium ion binding (18.1%) 3'(2'),5'-bisphosphate nucleotidase activity (18.1%)" "IPR000760 (22.1%) IPR006240 (22.1%) IPR020583 (22.1%)" "Inositol monophosphatase-like (22.1%) 3'(2'),5'-bisphosphate nucleotidase CysQ (22.1%) Inositol monophosphatase, metal-binding site (22.1%)" KIGQSTVLEDNSSTR Bifidobacterium animalis Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium animalis GO:0006412 (33.3%) GO:0015934 (33.3%) GO:0003735 (33.3%) translation (33.3%) large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR005996 (25%) IPR016082 (25%) IPR018038 (25%)" "Large ribosomal subunit protein uL30, bacteria (25%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (25%) Large ribosomal subunit protein uL30, conserved site (25%)" SVRFPGLISYVTPPGGGTTDYAVDIYYSAAKGEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" AGHTEAAVDLAR root "4.1.99.12 (54.5%) 3.5.4.25 (45.5%)" "3,4-dihydroxy-2-butanone-4-phosphate synthase (54.5%) GTP cyclohydrolase II (45.5%)" GO:0009231 (13.5%) GO:0005829 (13.5%) "GO:0008686 (13.5%) GO:0003935 (13.1%) GO:0000287 (12.4%)" riboflavin biosynthetic process (13.5%) cytosol (13.5%) "3,4-dihydroxy-2-butanone-4-phosphate synthase activity (13.5%) GTP cyclohydrolase II activity (13.1%) magnesium ion binding (12.4%)" "IPR000422 (18.1%) IPR017945 (18%) IPR036144 (17.8%)" "3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB (18.1%) DHBP synthase RibB-like alpha/beta domain superfamily (18%) GTP cyclohydrolase II superfamily (17.8%)" LNEVVASTMVGGATLTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (26.8%) GO:0006099 (23.2%)" "GO:0004459 (26.8%) GO:0030060 (22.5%) GO:0016491 (0.7%)" "lactate metabolic process (26.8%) tricarboxylic acid cycle (23.2%)" "L-lactate dehydrogenase (NAD+) activity (26.8%) L-malate dehydrogenase (NAD+) activity (22.5%) oxidoreductase activity (0.7%)" "IPR001236 (17.1%) IPR015955 (17.1%) IPR022383 (17.1%)" "Lactate/malate dehydrogenase, N-terminal (17.1%) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (17.1%) Lactate/malate dehydrogenase, C-terminal (17.1%)" VINLDKESEPDIYAAIRR Phocaeicola sartorii Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola sartorii 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (16.7%) GO:0005829 (16.7%) "GO:0004612 (16.7%) GO:0005524 (16.7%) GO:0016301 (16.7%)" gluconeogenesis (16.7%) cytosol (16.7%) "phosphoenolpyruvate carboxykinase (ATP) activity (16.7%) ATP binding (16.7%) kinase activity (16.7%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" GVHILFDKENVANTLGEYLAANGKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" DSDREFTIFTTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.4 (100%) leucine--tRNA ligase (100%) GO:0006429 (20%) GO:0005829 (20%) "GO:0002161 (20%) GO:0004823 (20%) GO:0005524 (20%)" leucyl-tRNA aminoacylation (20%) cytosol (20%) "aminoacyl-tRNA deacylase activity (20%) leucine-tRNA ligase activity (20%) ATP binding (20%)" "IPR001412 (12.5%) IPR002302 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Leucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" SRVILTPDNAQR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR021857 (100%) Protein of unknown function DUF3467 (100%) YSPDEYPKYENYDAIDVSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032259 (33.3%) "GO:0003676 (33.3%) GO:0008168 (33.3%)" methylation (33.3%) "nucleic acid binding (33.3%) methyltransferase activity (33.3%)" "IPR002052 (50%) IPR025247 (50%)" "DNA methylase, N-6 adenine-specific, conserved site (50%) Type II methyltransferase M.EcoRI-like (50%)" ASPYVITMNLTNAGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0019867 (50%) GO:2001070 (50%) outer membrane (50%) starch binding (50%) "IPR025970 (51.2%) IPR032187 (48.8%)" "SusE outer membrane protein (51.2%) Outer membrane protein SusF/SusE-like, C-terminal (48.8%)" CGWVDLVALK Pseudomonadati Bacteria Pseudomonadati 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (16.1%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (16.1%)" "IPR001114 (14.7%) IPR027417 (14.7%) IPR033128 (14.7%)" "Adenylosuccinate synthetase (14.7%) P-loop containing nucleoside triphosphate hydrolase (14.7%) Adenylosuccinate synthase, active site (14.7%)" VLQAVEEVNENQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.22 (100%) UDP-glucose 6-dehydrogenase (100%) "GO:0000271 (26%) GO:0006065 (21.9%)" "GO:0003979 (26%) GO:0051287 (26%)" "polysaccharide biosynthetic process (26%) UDP-glucuronate biosynthetic process (21.9%)" "UDP-glucose 6-dehydrogenase activity (26%) NAD binding (26%)" "IPR001732 (12.5%) IPR008927 (12.5%) IPR014026 (12.5%)" "UDP-glucose/GDP-mannose dehydrogenase, N-terminal (12.5%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (12.5%) UDP-glucose/GDP-mannose dehydrogenase, dimerisation (12.5%)" LADDALNGVTGLVEYHEHFNRF root 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0005829 (1%) "GO:0016747 (94.9%) GO:0016740 (3%) GO:0016746 (1%)" cytosol (1%) "acyltransferase activity, transferring groups other than amino-acyl groups (94.9%) transferase activity (3%) acyltransferase activity (1%)" "IPR016181 (50.5%) IPR000182 (49.5%)" "Acyl-CoA N-acyltransferase (50.5%) GNAT domain (49.5%)" AGKPLLIIAEDVEGEALATLVVNTMR root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.5%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (17.3%) GO:1990220 (0.1%) GO:0005829 (0%)" "GO:0140662 (17.5%) GO:0005524 (17.5%) GO:0016853 (17.4%)" "protein refolding (17.5%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (17.3%) GroEL-GroES complex (0.1%) cytosol (0%)" "ATP-dependent protein folding chaperone (17.5%) ATP binding (17.5%) isomerase activity (17.4%)" "IPR001844 (18.4%) IPR027409 (18.4%) IPR002423 (16.7%)" "Chaperonin Cpn60/GroEL (18.4%) GroEL-like apical domain superfamily (18.4%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%)" DGVYHCLICDAPLFHSQTK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.8.4.12 (100%) peptide-methionine (R)-S-oxide reductase (100%) "GO:0006979 (19.7%) GO:0030091 (19.7%) GO:0046686 (0.3%)" "GO:0005737 (19.7%) GO:0005829 (0.3%)" "GO:0033743 (19.7%) GO:0008270 (18.6%) GO:0046872 (0.8%)" "response to oxidative stress (19.7%) protein repair (19.7%) response to cadmium ion (0.3%)" "cytoplasm (19.7%) cytosol (0.3%)" "peptide-methionine (R)-S-oxide reductase activity (19.7%) zinc ion binding (18.6%) metal ion binding (0.8%)" "IPR002579 (33.2%) IPR011057 (33.2%) IPR028427 (33.2%)" "Peptide methionine sulphoxide reductase MrsB domain (33.2%) Mss4-like superfamily (33.2%) Peptide methionine sulfoxide reductase MsrB (33.2%)" IKYAMIGDPTGALTR root "1.11.1.26 (98.5%) 1.11.1.15 (1%) 1.-.-.- (0.2%)" "NADH-dependent peroxiredoxin (98.5%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (1%) Oxidoreductases (0.2%)" "GO:0006979 (14.7%) GO:0042744 (14.7%) GO:0045454 (14.7%)" "GO:0005829 (14.7%) GO:0016020 (0.1%) GO:0005737 (0%)" "GO:0008379 (14.7%) GO:0102039 (11.7%) GO:0004601 (0.1%)" "response to oxidative stress (14.7%) hydrogen peroxide catabolic process (14.7%) cell redox homeostasis (14.7%)" "cytosol (14.7%) membrane (0.1%) cytoplasm (0%)" "thioredoxin peroxidase activity (14.7%) NADH-dependent peroxiredoxin activity (11.7%) peroxidase activity (0.1%)" "IPR000866 (14.4%) IPR036249 (14.4%) IPR050217 (14.4%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (14.4%) Thioredoxin-like superfamily (14.4%) Thiol-specific antioxidant peroxiredoxin (14.4%)" AVGSSANCAAAMLVLNAAVADQLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (50%) GO:0004356 (50%) glutamine biosynthetic process (50%) glutamine synthetase activity (50%) "IPR008146 (14.4%) IPR008147 (14.4%) IPR022147 (14.4%)" "Glutamine synthetase, catalytic domain (14.4%) Glutamine synthetase, N-terminal domain (14.4%) Glutamine synthetase type III N-terminal (14.4%)" VVDTAESHSLNLTYR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.1.-.- (100%) Acting on ester bonds (100%) "GO:0006364 (19.1%) GO:0006508 (3.7%) GO:0006412 (0.2%)" GO:0005737 (18.1%) "GO:0004222 (19.1%) GO:0008270 (18.1%) GO:0004521 (17.9%)" "rRNA processing (19.1%) proteolysis (3.7%) translation (0.2%)" cytoplasm (18.1%) "metalloendopeptidase activity (19.1%) zinc ion binding (18.1%) RNA endonuclease activity (17.9%)" "IPR002036 (33.9%) IPR023091 (33.9%) IPR020549 (32.2%)" "Endoribonuclease YbeY (33.9%) Metalloprotease catalytic domain superfamily, predicted (33.9%) Endoribonuclease YbeY, conserved site (32.2%)" LTSYVGYEMFPR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.21.- (100%) Serine endopeptidases (100%) GO:0006508 (32.8%) GO:0005737 (32.8%) "GO:0008236 (32.8%) GO:0003743 (1.6%)" proteolysis (32.8%) cytoplasm (32.8%) "serine-type peptidase activity (32.8%) translation initiation factor activity (1.6%)" "IPR005151 (12.5%) IPR011659 (12.5%) IPR012393 (12.5%)" "Tail specific protease (12.5%) WD40-like beta-propeller (12.5%) Tricorn protease (12.5%)" DTYADAAQWDEK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.6%) GO:0005829 (17.6%) "GO:0004612 (17.6%) GO:0005524 (17.6%) GO:0046872 (16.1%)" gluconeogenesis (17.6%) cytosol (17.6%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.6%) ATP binding (17.6%) metal ion binding (16.1%)" "IPR001272 (26.1%) IPR013035 (26.1%) IPR008210 (23.9%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (26.1%) Phosphoenolpyruvate carboxykinase, C-terminal (26.1%) Phosphoenolpyruvate carboxykinase, N-terminal (23.9%)" TPAGMACGSMGPTTAGR Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (19.9%) GO:0005829 (0.3%) "GO:0004333 (19.9%) GO:0042803 (19.9%) GO:0046872 (19.9%)" tricarboxylic acid cycle (19.9%) cytosol (0.3%) "fumarate hydratase activity (19.9%) protein homodimerization activity (19.9%) metal ion binding (19.9%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR020557 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Fumarate lyase, conserved site (16.7%)" EVLDAFIACNDLAPLHNPANLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" AVLGLPIPNIAFHGAGASR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "6.3.1.21 (90.9%) 2.1.2.- (9.1%)" "phosphoribosylglycinamide formyltransferase 2 (90.9%) Hydroxymethyl-, formyl- and related transferases (9.1%)" GO:0006189 (16.7%) GO:0005829 (16.7%) "GO:0000287 (16.7%) GO:0004644 (16.7%) GO:0005524 (16.7%)" 'de novo' IMP biosynthetic process (16.7%) cytosol (16.7%) "magnesium ion binding (16.7%) phosphoribosylglycinamide formyltransferase activity (16.7%) ATP binding (16.7%)" "IPR003135 (12.5%) IPR005862 (12.5%) IPR011054 (12.5%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.5%) Formate-dependent phosphoribosylglycinamide formyltransferase (12.5%) Rudiment single hybrid motif (12.5%)" MEFPEPVISIAVEPK root 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0032790 (16.9%) GO:0006412 (0%) GO:0070125 (0%)" "GO:0005737 (15.9%) GO:0005739 (0%) GO:0005829 (0%)" "GO:0003746 (17.3%) GO:0005525 (16.9%) GO:0003924 (16.4%)" "ribosome disassembly (16.9%) translation (0%) mitochondrial translational elongation (0%)" "cytoplasm (15.9%) mitochondrion (0%) cytosol (0%)" "translation elongation factor activity (17.3%) GTP binding (16.9%) GTPase activity (16.4%)" "IPR009000 (6.4%) IPR041095 (6.4%) IPR035647 (6.4%)" "Translation protein, beta-barrel domain superfamily (6.4%) Elongation Factor G, domain II (6.4%) EF-G domain III/V-like (6.4%)" LSSVAGGSLPNAIPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" GMTYEGYGPHGVAVFVDTLTDNTTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006355 (31.5%) GO:0005829 (33.7%) GO:0003677 (34.8%) regulation of DNA-templated transcription (31.5%) cytosol (33.7%) DNA binding (34.8%) "IPR002876 (16.9%) IPR048300 (16.9%) IPR049083 (16.9%)" "Transcriptional regulator TACO1-like (16.9%) TACO1/YebC-like, second and third domains (16.9%) TACO1/YebC-like, N-terminal domain (16.9%)" VSDPGKLEGNTVFTYLDAFCKPEHFGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (25%) GO:0005829 (25%) "GO:0004830 (25%) GO:0005524 (25%)" tryptophanyl-tRNA aminoacylation (25%) cytosol (25%) "tryptophan-tRNA ligase activity (25%) ATP binding (25%)" "IPR001412 (20%) IPR002305 (20%) IPR002306 (20%)" "Aminoacyl-tRNA synthetase, class I, conserved site (20%) Aminoacyl-tRNA synthetase, class Ic (20%) Tryptophan-tRNA ligase (20%)" LSYEGSTGPNAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) EVDNIKWEYAGQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.4.1.11 (75%) 2.4.-.- (25%)" "glycogen(starch) synthase (75%) Glycosyltransferases (25%)" GO:0009103 (45.9%) "GO:0016757 (45.9%) GO:0004373 (8.1%)" lipopolysaccharide biosynthetic process (45.9%) "glycosyltransferase activity (45.9%) alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (8.1%)" "IPR001296 (47.6%) IPR028098 (47.6%) IPR050194 (4.8%)" "Glycosyl transferase, family 1 (47.6%) Glycosyltransferase subfamily 4-like, N-terminal domain (47.6%) Glycosyltransferase group 1 (4.8%)" VGESYGVLMSDVTQAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0044718 (2.4%) GO:0009279 (92.9%) "GO:0004180 (2.4%) GO:0015344 (2.4%)" siderophore transmembrane transport (2.4%) cell outer membrane (92.9%) "carboxypeptidase activity (2.4%) siderophore uptake transmembrane transporter activity (2.4%)" "IPR039426 (14.9%) IPR012910 (14.6%) IPR023996 (14.6%)" "TonB-dependent receptor-like (14.9%) TonB-dependent receptor, plug domain (14.6%) TonB-dependent outer membrane protein, SusC/RagA (14.6%)" LGIHGSPTCELVYK Pseudomonadati Bacteria Pseudomonadati "1.3.8.1 (61.3%) 1.3.99.- (22.6%) 1.3.8.- (12.9%)" "short-chain acyl-CoA dehydrogenase (61.3%) With other acceptors (22.6%) With a flavin as acceptor (12.9%)" "GO:0050660 (49.8%) GO:0003995 (29.6%) GO:0016627 (17.5%)" "flavin adenine dinucleotide binding (49.8%) acyl-CoA dehydrogenase activity (29.6%) oxidoreductase activity, acting on the CH-CH group of donors (17.5%)" "IPR009075 (9.5%) IPR052166 (9.5%) IPR006091 (9.4%)" "Acyl-CoA dehydrogenase/oxidase, C-terminal (9.5%) Diverse substrate specificity acyl-CoA dehydrogenase (9.5%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.4%)" KNPVMLYAGHNIGEDYLYELSEVLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" SLEHEVTLVDDTLAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0009271 (47.8%) GO:0006355 (0.4%) GO:0009408 (0.4%)" "GO:0005829 (47.8%) GO:0005886 (1.3%) GO:0005667 (0.4%)" "GO:0005543 (0.4%) GO:0042802 (0.4%)" "phage shock (47.8%) regulation of DNA-templated transcription (0.4%) response to heat (0.4%)" "cytosol (47.8%) plasma membrane (1.3%) transcription regulator complex (0.4%)" "phospholipid binding (0.4%) identical protein binding (0.4%)" "IPR007157 (51.1%) IPR014319 (48.9%)" "PspA/VIPP1 (51.1%) Phage shock protein, PspA (48.9%)" ALNPNNPVAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.1 (60%) 1.2.1.51 (20%) 1.2.7.- (20%)" "pyruvate synthase (60%) pyruvate dehydrogenase (NADP(+)) (20%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (11.3%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (11.3%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" SSSALQEQISK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.4.21.107 (66.7%) 3.4.21.- (33.3%)" "peptidase Do (66.7%) Serine endopeptidases (33.3%)" GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001478 (17%) IPR001940 (17%) IPR009003 (17%)" "PDZ domain (17%) Peptidase S1C (17%) Peptidase S1, PA clan (17%)" AVVAVDACVKDTIEAAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.2.12 (96.7%) 5.4.2.1 (3.3%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (96.7%) Transferred entry: 5.4.2.11 and 5.4.2.12 (3.3%)" "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" YGLPAPVGYACTTPR root 6.2.1.5 (100%) succinate--CoA ligase (ADP-forming) (100%) "GO:0006099 (13.7%) GO:0006104 (13.7%) GO:0006086 (0%)" "GO:0005829 (13.7%) GO:0042709 (13.7%) GO:0005737 (0%)" "GO:0004775 (13.7%) GO:0005524 (13.7%) GO:0000287 (13%)" "tricarboxylic acid cycle (13.7%) succinyl-CoA metabolic process (13.7%) pyruvate decarboxylation to acetyl-CoA (0%)" "cytosol (13.7%) succinate-CoA ligase complex (13.7%) cytoplasm (0%)" "succinate-CoA ligase (ADP-forming) activity (13.7%) ATP binding (13.7%) magnesium ion binding (13%)" "IPR013650 (14.6%) IPR013815 (14.5%) IPR011761 (14.5%)" "ATP-grasp fold, succinyl-CoA synthetase-type (14.6%) ATP-grasp fold, subdomain 1 (14.5%) ATP-grasp fold (14.5%)" NGGLSFIFGSQPIESQADMVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (25%) GO:0006183 (25%)" "GO:0003938 (25%) GO:0046872 (25%)" "GMP biosynthetic process (25%) GTP biosynthetic process (25%)" "IMP dehydrogenase activity (25%) metal ion binding (25%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" TNFDTLLEAGCHFGHLKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33%) "GO:0022627 (33%) GO:0005840 (1%)" GO:0003735 (33%) translation (33%) "cytosolic small ribosomal subunit (33%) ribosome (1%)" structural constituent of ribosome (33%) "IPR001865 (25.1%) IPR005706 (25.1%) IPR023591 (25.1%)" "Small ribosomal subunit protein uS2 (25.1%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.1%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.1%)" VIVFSPHPDDDVISMGGTIRR Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.5.99.6 (98.2%) 3.1.1.31 (1.8%)" "glucosamine-6-phosphate deaminase (98.2%) 6-phosphogluconolactonase (1.8%)" "GO:0005975 (32.3%) GO:0006044 (31.8%) GO:0006046 (0.8%)" "GO:0004342 (32.6%) GO:0016853 (1.4%) GO:0016787 (0.5%)" "carbohydrate metabolic process (32.3%) N-acetylglucosamine metabolic process (31.8%) N-acetylglucosamine catabolic process (0.8%)" "glucosamine-6-phosphate deaminase activity (32.6%) isomerase activity (1.4%) hydrolase activity (0.5%)" "IPR003737 (17.5%) IPR052960 (17.5%) IPR024078 (17.1%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (17.5%) Glucosamine-6-phosphate deaminase-like (17.5%) Putative deacetylase LmbE-like domain superfamily (17.1%)" LTGMAFRVPTPNVSVVDLTVR root "1.2.1.12 (62.7%) 1.2.1.- (37.2%) 1.2.1.13 (0.1%)" "glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (62.7%) With NAD(+) or NADP(+) as acceptor (37.2%) glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) (0.1%)" "GO:0006006 (11.6%) GO:0006096 (8.8%) GO:0006915 (6.6%)" "GO:0005829 (8.3%) GO:0005856 (6.6%) GO:0005634 (6.6%)" "GO:0051287 (13%) GO:0004365 (12.6%) GO:0050661 (11.6%)" "glucose metabolic process (11.6%) glycolytic process (8.8%) apoptotic process (6.6%)" "cytosol (8.3%) cytoskeleton (6.6%) nucleus (6.6%)" "NAD binding (13%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (12.6%) NADP binding (11.6%)" "IPR020829 (17.8%) IPR020831 (17.8%) IPR020830 (16.6%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.8%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.8%) Glyceraldehyde 3-phosphate dehydrogenase, active site (16.6%)" MLDEYLTLLEEAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.5%) GO:0005737 (16.5%) "GO:0000049 (16.5%) GO:0004829 (16.5%) GO:0005524 (16.5%)" threonyl-tRNA aminoacylation (16.5%) cytoplasm (16.5%) "tRNA binding (16.5%) threonine-tRNA ligase activity (16.5%) ATP binding (16.5%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" RPAQAPTTASGDPVVTRPAASTTQGAVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.1.70 (100%) Transferred entry: 7.2.4.5 (100%) GO:0016829 (100%) lyase activity (100%) "IPR000089 (25%) IPR001882 (25%) IPR011053 (25%)" "Biotin/lipoyl attachment (25%) Biotin-binding site (25%) Single hybrid motif (25%)" TATADQAQEVVAHIR Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%) GO:0019563 (16.5%)" GO:0005829 (16.5%) "GO:0004807 (16.5%) GO:0016853 (1.1%)" "gluconeogenesis (16.5%) glycolytic process (16.5%) glycerol catabolic process (16.5%)" cytosol (16.5%) "triose-phosphate isomerase activity (16.5%) isomerase activity (1.1%)" "IPR000652 (20.3%) IPR013785 (20.3%) IPR020861 (20.3%)" "Triosephosphate isomerase (20.3%) Aldolase-type TIM barrel (20.3%) Triosephosphate isomerase, active site (20.3%)" HHADAIHPGYGFLSENADFAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.3.4.14 (79.3%) 6.4.1.2 (20.7%)" "biotin carboxylase (79.3%) acetyl-CoA carboxylase (20.7%)" GO:2001295 (15.4%) "GO:0005524 (25%) GO:0046872 (19.9%) GO:0003989 (18.6%)" malonyl-CoA biosynthetic process (15.4%) "ATP binding (25%) metal ion binding (19.9%) acetyl-CoA carboxylase activity (18.6%)" "IPR005481 (14%) IPR011764 (14%) IPR016185 (14%)" "Biotin carboxylase-like, N-terminal domain (14%) Biotin carboxylation domain (14%) Pre-ATP-grasp domain superfamily (14%)" LGYINHVPLVWDNEPAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "4.2.1.59 (52%) 3.5.1.108 (48%)" "3-hydroxyacyl-[acyl-carrier-protein] dehydratase (52%) UDP-3-O-acyl-N-acetylglucosamine deacetylase (48%)" "GO:0006633 (14.4%) GO:0009245 (14.4%)" "GO:0005737 (14.4%) GO:0016020 (14.4%)" "GO:0103117 (14.4%) GO:0019171 (13.3%) GO:0046872 (13.3%)" "fatty acid biosynthetic process (14.4%) lipid A biosynthetic process (14.4%)" "cytoplasm (14.4%) membrane (14.4%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.4%) (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (13.3%) metal ion binding (13.3%)" "IPR004463 (14.4%) IPR010084 (14.4%) IPR011334 (14.4%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.4%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (14.4%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.4%)" KQYGEAFEKR root "2.3.1.61 (98.6%) 2.3.1.- (1.2%) 6.2.1.5 (0.2%)" "dihydrolipoyllysine-residue succinyltransferase (98.6%) Transferring groups other than amino-acyl groups (1.2%) succinate--CoA ligase (ADP-forming) (0.2%)" "GO:0006099 (20%) GO:0033512 (18.7%) GO:0006554 (0.7%)" "GO:0005829 (19.9%) GO:0045252 (19.5%) GO:0005737 (0.1%)" "GO:0004149 (20%) GO:0016746 (0.5%) GO:0000287 (0.1%)" "tricarboxylic acid cycle (20%) L-lysine catabolic process to acetyl-CoA via saccharopine (18.7%) lysine catabolic process (0.7%)" "cytosol (19.9%) oxoglutarate dehydrogenase complex (19.5%) cytoplasm (0.1%)" "dihydrolipoyllysine-residue succinyltransferase activity (20%) acyltransferase activity (0.5%) magnesium ion binding (0.1%)" "IPR023213 (11.4%) IPR001078 (11.4%) IPR050537 (11.3%)" "Chloramphenicol acetyltransferase-like domain superfamily (11.4%) 2-oxoacid dehydrogenase acyltransferase, catalytic domain (11.4%) 2-oxoacid dehydrogenase (11.3%)" IQLVGDDLFVTNTK root "4.2.1.11 (99.9%) 6.3.4.2 (0.1%)" "phosphopyruvate hydratase (99.9%) CTP synthase (glutamine hydrolyzing) (0.1%)" "GO:0006096 (16.7%) GO:0019856 (0%) GO:0044210 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.1%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.1%)" "glycolytic process (16.7%) pyrimidine nucleobase biosynthetic process (0%) 'de novo' CTP biosynthetic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.1%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.1%)" "IPR000941 (16.7%) IPR020810 (16.7%) IPR036849 (16.7%)" "Enolase (16.7%) Enolase, C-terminal TIM barrel domain (16.7%) Enolase-like, C-terminal domain superfamily (16.7%)" TALCETVEKLGNEPDVISAFHQLQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR007139 (100%) Protein of unknown function DUF349 (100%) MNVRDNEVFTPIDLINAK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (20.1%) GO:0006508 (0.2%) GO:0006633 (0%)" "GO:0000428 (20.1%) GO:0015934 (0%) GO:0031981 (0%)" "GO:0003677 (20.1%) GO:0003899 (20.1%) GO:0032549 (18.9%)" "DNA-templated transcription (20.1%) proteolysis (0.2%) fatty acid biosynthetic process (0%)" "DNA-directed RNA polymerase complex (20.1%) large ribosomal subunit (0%) nuclear lumen (0%)" "DNA binding (20.1%) DNA-directed RNA polymerase activity (20.1%) ribonucleoside binding (18.9%)" "IPR007645 (8.2%) IPR015712 (7.7%) IPR019462 (7.7%)" "RNA polymerase Rpb2, domain 3 (8.2%) DNA-directed RNA polymerase, subunit 2 (7.7%) DNA-directed RNA polymerase, beta subunit, external 1 domain (7.7%)" EVAYMYGMYKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (25.9%) "GO:0005829 (25%) GO:0009986 (1.9%)" "GO:0004354 (25.9%) GO:0000166 (20.4%) GO:0004352 (0.9%)" glutamate biosynthetic process (25.9%) "cytosol (25%) cell surface (1.9%)" "glutamate dehydrogenase (NADP+) activity (25.9%) nucleotide binding (20.4%) glutamate dehydrogenase (NAD+) activity (0.9%)" "IPR006095 (12.1%) IPR006097 (12.1%) IPR046346 (12.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (12.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.1%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (12.1%)" DILPTSNSVFNSAVVPFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "2.4.1.319 (50%) 2.4.1.320 (50%)" "beta-1,4-mannooligosaccharide phosphorylase (50%) 1,4-beta-mannosyl-N-acetylglucosamine phosphorylase (50%)" "GO:0016757 (66.7%) GO:0016798 (29.2%) GO:0016787 (4.2%)" "glycosyltransferase activity (66.7%) hydrolase activity, acting on glycosyl bonds (29.2%) hydrolase activity (4.2%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" ELNWGVGAFTKPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IVTGVTASQALLDEAVR root 3.5.4.16 (100%) GTP cyclohydrolase I (100%) "GO:0006281 (26.3%) GO:0005975 (0%) GO:0010212 (0%)" "GO:0005737 (30.1%) GO:0005829 (0%) GO:0060187 (0%)" "GO:0046872 (30.2%) GO:0016787 (13%) GO:0003934 (0%)" "DNA repair (26.3%) carbohydrate metabolic process (0%) response to ionizing radiation (0%)" "cytoplasm (30.1%) cytosol (0%) cell pole (0%)" "metal ion binding (30.2%) hydrolase activity (13%) GTP cyclohydrolase I activity (0%)" "IPR002678 (49.7%) IPR036069 (49.7%) IPR003778 (0.1%)" "DUF34/NIF3 (49.7%) DUF34/NIF3 superfamily (49.7%) Carboxyltransferase domain, subdomain A and B (0.1%)" EGMACGSMGPTTAGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" LIEGTKFENAPLEQIVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0004784 (50%) GO:0046872 (50%)" "superoxide dismutase activity (50%) metal ion binding (50%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" TGEDIPITAR Bacteria Bacteria "GO:0006310 (14.3%) GO:0006417 (14.3%) GO:0006355 (14.2%)" "GO:0005829 (14.3%) GO:0032993 (0%) GO:1990177 (0%)" "GO:0030527 (14.3%) GO:0003677 (14.3%) GO:0000976 (0%)" "DNA recombination (14.3%) regulation of translation (14.3%) regulation of DNA-templated transcription (14.2%)" "cytosol (14.3%) protein-DNA complex (0%) IHF-DNA complex (0%)" "structural constituent of chromatin (14.3%) DNA binding (14.3%) transcription cis-regulatory region binding (0%)" "IPR000119 (25.1%) IPR010992 (25.1%) IPR005684 (24.9%)" "Histone-like DNA-binding protein (25.1%) Integration host factor (IHF)-like DNA-binding domain superfamily (25.1%) Integration host factor, alpha subunit (24.9%)" VTKPEAGHFAK root "GO:0006412 (24.9%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (24.9%) GO:0005840 (0.4%) GO:0005737 (0%)" "GO:0003735 (24.9%) GO:0019843 (24.8%)" "translation (24.9%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.9%) ribosome (0.4%) cytoplasm (0%)" "structural constituent of ribosome (24.9%) rRNA binding (24.8%)" "IPR009000 (25%) IPR019927 (25%) IPR000597 (24.7%)" "Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, bacteria/organella (25%) Large ribosomal subunit protein uL3 (24.7%)" LQMGGSDQWGNITTGTELIRR root 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.8%) GO:0005829 (16.8%) "GO:0004831 (16.8%) GO:0005524 (16.8%) GO:0003723 (16.7%)" tyrosyl-tRNA aminoacylation (16.8%) cytosol (16.8%) "tyrosine-tRNA ligase activity (16.8%) ATP binding (16.8%) RNA binding (16.7%)" "IPR002305 (13.1%) IPR002307 (13.1%) IPR024088 (13.1%)" "Aminoacyl-tRNA synthetase, class Ic (13.1%) Tyrosine-tRNA ligase (13.1%) Tyrosine-tRNA ligase, bacterial-type (13.1%)" VANLGSLGDQVNVK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.9%) GO:0002181 (0%) GO:0032259 (0%)" "GO:0005840 (20.2%) GO:1990904 (19.9%) GO:0022625 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.9%) GO:0008168 (0%)" "translation (19.9%) cytoplasmic translation (0%) methylation (0%)" "ribosome (20.2%) ribonucleoprotein complex (19.9%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%) methyltransferase activity (0%)" "IPR009027 (14.4%) IPR020070 (14.4%) IPR036935 (14.4%)" "Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.4%) Large ribosomal subunit protein bL9, N-terminal (14.4%) Large ribosomal subunit protein bL9, N-terminal domain superfamily (14.4%)" MMNQELLMSPNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" GEMPETLLEIMQK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0000303 (1.1%) GO:0006950 (1.1%) GO:0009411 (1.1%)" "GO:0005737 (93.5%) GO:0005829 (1.1%)" GO:0042803 (1.1%) "response to superoxide (1.1%) response to stress (1.1%) response to UV (1.1%)" "cytoplasm (93.5%) cytosol (1.1%)" protein homodimerization activity (1.1%) "IPR006015 (33.3%) IPR006016 (33.3%) IPR014729 (33.3%)" "Universal stress protein A family (33.3%) UspA (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (33.3%)" AALLIQELAGGK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0009328 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) phenylalanine-tRNA ligase complex (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002547 (7.7%) IPR004532 (7.7%) IPR005121 (7.7%)" "tRNA-binding domain (7.7%) Phenylalanine-tRNA ligase, class IIc, beta subunit, bacterial type (7.7%) Ferrodoxin-fold anticodon-binding domain (7.7%)" FIPVYVTENMVGHK Bacteria Bacteria "GO:0000028 (16.6%) GO:0006412 (16.6%)" "GO:0005737 (16.6%) GO:0015935 (16.5%) GO:0005840 (0.2%)" "GO:0003735 (16.6%) GO:0019843 (16.5%) GO:0003723 (0.2%)" "ribosomal small subunit assembly (16.6%) translation (16.6%)" "cytoplasm (16.6%) small ribosomal subunit (16.5%) ribosome (0.2%)" "structural constituent of ribosome (16.6%) rRNA binding (16.5%) RNA binding (0.2%)" "IPR002222 (25.1%) IPR023575 (25.1%) IPR020934 (25%)" "Small ribosomal subunit protein uS19 (25.1%) Small ribosomal subunit protein uS19, superfamily (25.1%) Small ribosomal subunit protein uS19, conserved site (25%)" NSQYNSAQLKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae LSSDLVGATSDTSCLVGYASALKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.3%) IPR008948 (14.3%) IPR018951 (14.3%)" "Fumarate lyase family (14.3%) L-Aspartase-like (14.3%) Fumarase C, C-terminal (14.3%)" DAAPAETEDKAE Bifidobacterium adolescentis Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium adolescentis IPR008769 (100%) Poly granule associated (100%) QDITKADAMK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004829 (16.7%) GO:0005524 (16.7%)" threonyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) threonine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" IVNEPTAASLAYGIDK root 1.3.1.74 (100%) 2-alkenal reductase [NAD(P)(+)] (100%) GO:0016226 (0.5%) "GO:0005737 (9.3%) GO:0070013 (0.9%) GO:0009507 (0.5%)" "GO:0005524 (29.8%) GO:0140662 (29.8%) GO:0051082 (28.2%)" iron-sulfur cluster assembly (0.5%) "cytoplasm (9.3%) intracellular organelle lumen (0.9%) chloroplast (0.5%)" "ATP binding (29.8%) ATP-dependent protein folding chaperone (29.8%) unfolded protein binding (28.2%)" "IPR013126 (17%) IPR018181 (17%) IPR043129 (17%)" "Heat shock protein 70 family (17%) Heat shock protein 70, conserved site (17%) ATPase, nucleotide binding domain (17%)" RGYFYDALNQLIHSGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (3.8%) "GO:0000287 (19.2%) GO:0004743 (19.2%) GO:0005524 (19.2%)" response to stress (3.8%) "magnesium ion binding (19.2%) pyruvate kinase activity (19.2%) ATP binding (19.2%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" ASGHVDAFNDPLIDNRDSK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.7%) GO:0015966 (12.2%) GO:0044281 (0.2%)" "GO:0005737 (12.7%) GO:0070062 (12.2%) GO:1990742 (12.2%)" "GO:0004820 (12.7%) GO:0005524 (12.5%) GO:0004081 (12.2%)" "glycyl-tRNA aminoacylation (12.7%) diadenosine tetraphosphate biosynthetic process (12.2%) small molecule metabolic process (0.2%)" "cytoplasm (12.7%) extracellular exosome (12.2%) microvesicle (12.2%)" "glycine-tRNA ligase activity (12.7%) ATP binding (12.5%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.2%)" "IPR027031 (11.3%) IPR045864 (11.2%) IPR002314 (11.1%)" "Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 (11.3%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.2%) Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%)" MAAAMANYELGLLTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.3%) IPR008948 (14.3%) IPR018951 (14.3%)" "Fumarate lyase family (14.3%) L-Aspartase-like (14.3%) Fumarase C, C-terminal (14.3%)" MNAESGACADKKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (50%) GO:0016491 (25%) GO:0004601 (16.7%)" "iron ion binding (50%) oxidoreductase activity (25%) peroxidase activity (16.7%)" "IPR003251 (12.5%) IPR009040 (12.5%) IPR009078 (12.5%)" "Rubrerythrin, diiron-binding domain (12.5%) Ferritin-like diiron domain (12.5%) Ferritin-like superfamily (12.5%)" VLIEELSATPHEAGSVAGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.24.- (100%) Metalloendopeptidases (100%) GO:0016485 (25%) GO:0005886 (25%) "GO:0004222 (25%) GO:0046872 (25%)" protein processing (25%) plasma membrane (25%) "metalloendopeptidase activity (25%) metal ion binding (25%)" "IPR000718 (20%) IPR008753 (20%) IPR018497 (20%)" "Peptidase M13 (20%) Peptidase M13, N-terminal domain (20%) Peptidase M13, C-terminal domain (20%)" LKPYNQEVEEQDPVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR032573 (100%) Protein of unknown function DUF4925 (100%) AIGAGVQVIGCPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" EFKVECNQGRPQVTYKEAITQPVELR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" TGDLGTIDHDNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.2.1.3 (100%) long-chain-fatty-acid--CoA ligase (100%) GO:0016020 (12.5%) "GO:0016405 (68.8%) GO:0004467 (18.8%)" membrane (12.5%) "CoA-ligase activity (68.8%) long-chain fatty acid-CoA ligase activity (18.8%)" "IPR000873 (32.6%) IPR020845 (32.6%) IPR042099 (32.6%)" "AMP-dependent synthetase/ligase domain (32.6%) AMP-binding, conserved site (32.6%) ANL, N-terminal domain (32.6%)" STYLLEEGDSIYYDSIVPHHVHAYEGQAAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005829 (33.3%) "GO:0003677 (33.3%) GO:0003700 (33.3%)" cytosol (33.3%) "DNA binding (33.3%) DNA-binding transcription factor activity (33.3%)" "IPR001387 (16.7%) IPR010982 (16.7%) IPR011051 (16.7%)" "Cro/C1-type, helix-turn-helix domain (16.7%) Lambda repressor-like, DNA-binding domain superfamily (16.7%) RmlC-like cupin domain superfamily (16.7%)" KSLVTFIYVGKPTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015031 (33.3%) GO:0005886 (33.3%) GO:0022857 (33.3%) protein transport (33.3%) plasma membrane (33.3%) transmembrane transporter activity (33.3%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) IMLLNNEEKGEAFVAENYDK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.4%) GO:0043335 (16.4%) GO:0051083 (16.4%)" "GO:0003755 (16.4%) GO:0043022 (16.4%) GO:0044183 (16.4%)" "protein transport (16.4%) protein unfolding (16.4%) 'de novo' cotranslational protein folding (16.4%)" "peptidyl-prolyl cis-trans isomerase activity (16.4%) ribosome binding (16.4%) protein folding chaperone (16.4%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" SILLHVIDESWKENLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (0.8%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (0.8%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" SSLAQGENVYLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (50%) IPR010992 (50%)" "Histone-like DNA-binding protein (50%) Integration host factor (IHF)-like DNA-binding domain superfamily (50%)" INVIGNGVVLDPLLFKQEAESLAASGHDITK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0004019 (16.7%) GO:0005525 (16.7%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) adenylosuccinate synthase activity (16.7%) GTP binding (16.7%)" "IPR001114 (14.3%) IPR018220 (14.3%) IPR027417 (14.3%)" "Adenylosuccinate synthetase (14.3%) Adenylosuccinate synthase, GTP-binding site (14.3%) P-loop containing nucleoside triphosphate hydrolase (14.3%)" VAYTELVPEITQEPDYEKALAAVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.11.1.24 (95%) 1.11.1.- (5%)" "thioredoxin-dependent peroxiredoxin (95%) Peroxidases (5%)" GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" SRIESGSLQDLIANKNVVGVTTNPSIFQK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (25%)" GO:0005737 (25%) GO:0004801 (25%) "carbohydrate metabolic process (25%) pentose-phosphate shunt (25%)" cytoplasm (25%) transaldolase activity (25%) "IPR001585 (25%) IPR004732 (25%) IPR013785 (25%)" "Transaldolase/Fructose-6-phosphate aldolase (25%) Transaldolase type 2 (25%) Aldolase-type TIM barrel (25%)" KIFADLGAWQIAQLAR root "2.1.3.15 (95.7%) 6.4.1.2 (4.3%)" "acetyl-CoA carboxytransferase (95.7%) acetyl-CoA carboxylase (4.3%)" "GO:0006633 (16.5%) GO:2001295 (16.3%) GO:0006260 (0.1%)" "GO:0009317 (16.5%) GO:0005737 (0.1%) GO:0005829 (0.1%)" "GO:0003989 (16.5%) GO:0005524 (16.5%) GO:0016743 (16.5%)" "fatty acid biosynthetic process (16.5%) malonyl-CoA biosynthetic process (16.3%) DNA replication (0.1%)" "acetyl-CoA carboxylase complex (16.5%) cytoplasm (0.1%) cytosol (0.1%)" "acetyl-CoA carboxylase activity (16.5%) ATP binding (16.5%) carboxyl- or carbamoyltransferase activity (16.5%)" "IPR001095 (33%) IPR011763 (33%) IPR029045 (33%)" "Acetyl-CoA carboxylase, alpha subunit (33%) Acetyl-coenzyme A carboxyltransferase, C-terminal (33%) ClpP/crotonase-like domain superfamily (33%)" INMIMQSAFFK Bacteria Bacteria "1.2.7.1 (91.6%) 1.2.7.- (7.7%) 1.2.1.51 (0.7%)" "pyruvate synthase (91.6%) With an iron-sulfur protein as acceptor (7.7%) pyruvate dehydrogenase (NADP(+)) (0.7%)" "GO:0006979 (17.2%) GO:0022900 (17%) GO:0044281 (0.6%)" "GO:0051539 (17.1%) GO:0005506 (17%) GO:0030976 (13.5%)" "response to oxidative stress (17.2%) electron transport chain (17%) small molecule metabolic process (0.6%)" "4 iron, 4 sulfur cluster binding (17.1%) iron ion binding (17%) thiamine pyrophosphate binding (13.5%)" "IPR019752 (7.9%) IPR050722 (7.9%) IPR017896 (7.9%)" "Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (7.9%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.9%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (7.9%)" YVPCSHCHGSGAEGSEGVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006260 (13%) GO:0042026 (13%) GO:0009408 (10.9%)" GO:0005737 (13%) "GO:0008270 (13%) GO:0031072 (13%) GO:0051082 (13%)" "DNA replication (13%) protein refolding (13%) response to heat (10.9%)" cytoplasm (13%) "zinc ion binding (13%) heat shock protein binding (13%) unfolded protein binding (13%)" "IPR001305 (12.8%) IPR001623 (12.8%) IPR002939 (12.8%)" "Heat shock protein DnaJ, cysteine-rich domain (12.8%) DnaJ domain (12.8%) Chaperone DnaJ, C-terminal (12.8%)" TEGKDIPTLIAEGNYK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" SNTDTGSAEAQIALFSYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) "GO:0022627 (25%) GO:0005840 (0.5%)" "GO:0003735 (25%) GO:0019843 (24.5%)" translation (25%) "cytosolic small ribosomal subunit (25%) ribosome (0.5%)" "structural constituent of ribosome (25%) rRNA binding (24.5%)" "IPR000589 (33.3%) IPR005290 (33.3%) IPR009068 (33.3%)" "Small ribosomal subunit protein uS15 (33.3%) Small ribosomal subunit protein uS15, bacteria (33.3%) uS15/NS1, RNA-binding domain superfamily (33.3%)" ALYALGETPLPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.99.17 (100%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (100%) "GO:0002099 (33%) GO:0008616 (1.1%)" GO:0005737 (33%) GO:0051075 (33%) "tRNA wobble guanine modification (33%) tRNA queuosine(34) biosynthetic process (1.1%)" cytoplasm (33%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity (33%) "IPR003699 (25%) IPR036100 (25%) IPR042118 (25%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA (25%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily (25%) QueA, domain 1 (25%)" LLKLPAPIQMAIQNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0007059 (25%) GO:0045881 (25%)" GO:0005694 (25%) GO:0003677 (25%) "chromosome segregation (25%) positive regulation of sporulation resulting in formation of a cellular spore (25%)" chromosome (25%) DNA binding (25%) "IPR004437 (16.9%) IPR041468 (16.9%) IPR050336 (16.9%)" "ParB/RepB/Spo0J partition protein (16.9%) ParB/Spo0J, HTH domain (16.9%) Chromosome-partitioning and nucleoid occlusion protein (16.9%)" LIDANTTIPAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0042026 (0.3%) GO:0051085 (0.3%)" "GO:0005524 (32.8%) GO:0051082 (32.8%) GO:0140662 (32.8%)" "protein refolding (0.3%) obsolete chaperone cofactor-dependent protein refolding (0.3%)" "ATP binding (32.8%) unfolded protein binding (32.8%) ATP-dependent protein folding chaperone (32.8%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" YSDHIALPVEIEKREEKDGETVISWEK root "GO:0006457 (0.1%) GO:0006974 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (19.8%) GO:0005829 (0.1%) GO:0005886 (0%)" "GO:0005524 (19.9%) GO:0016887 (19.9%) GO:0051082 (19.9%)" "protein folding (0.1%) DNA damage response (0.1%) response to heat (0.1%)" "cytoplasm (19.8%) cytosol (0.1%) plasma membrane (0%)" "ATP binding (19.9%) ATP hydrolysis activity (19.9%) unfolded protein binding (19.9%)" "IPR001404 (14.6%) IPR036890 (14.5%) IPR020568 (14.5%)" "Heat shock protein Hsp90 family (14.6%) Histidine kinase/HSP90-like ATPase superfamily (14.5%) Ribosomal protein uS5 domain 2-type superfamily (14.5%)" AHSIAAQGGINAAK root "1.3.5.1 (98.5%) 1.3.5.4 (1.4%) 1.3.99.1 (0.1%)" "succinate dehydrogenase (98.5%) Transferred entry: 1.3.5.1 (1.4%) Deleted entry (0.1%)" "GO:0009061 (18.7%) GO:0006108 (0%) GO:0006633 (0%)" "GO:0005886 (18.7%) GO:0005829 (0%) GO:0009317 (0%)" "GO:0009055 (18.7%) GO:0050660 (18.7%) GO:0000104 (14.5%)" "anaerobic respiration (18.7%) malate metabolic process (0%) fatty acid biosynthetic process (0%)" "plasma membrane (18.7%) cytosol (0%) acetyl-CoA carboxylase complex (0%)" "electron transfer activity (18.7%) flavin adenine dinucleotide binding (18.7%) succinate dehydrogenase activity (14.5%)" "IPR003953 (14.4%) IPR030664 (14.4%) IPR036188 (14.4%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.4%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (14.4%) FAD/NAD(P)-binding domain superfamily (14.4%)" KDGEFAAIIALKCETDFVAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (48.4%) GO:0003746 (51.6%) cytoplasm (48.4%) translation elongation factor activity (51.6%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" GCDEEMIKDLNNHFMGECTEVGMYLAMSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (50%) GO:0016491 (23.2%) GO:0004601 (14.8%)" "iron ion binding (50%) oxidoreductase activity (23.2%) peroxidase activity (14.8%)" "IPR003251 (12.7%) IPR009040 (12.7%) IPR009078 (12.7%)" "Rubrerythrin, diiron-binding domain (12.7%) Ferritin-like diiron domain (12.7%) Ferritin-like superfamily (12.7%)" YAVGQGPMWVVVNAH Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 3.1.1.31 (100%) 6-phosphogluconolactonase (100%) "GO:0006006 (25.1%) GO:0009051 (23.2%) GO:0006098 (0.2%)" GO:0005829 (25.2%) "GO:0017057 (25.2%) GO:0016787 (0.9%) GO:0016853 (0.2%)" "glucose metabolic process (25.1%) pentose-phosphate shunt, oxidative branch (23.2%) pentose-phosphate shunt (0.2%)" cytosol (25.2%) "6-phosphogluconolactonase activity (25.2%) hydrolase activity (0.9%) isomerase activity (0.2%)" "IPR019405 (20.3%) IPR050282 (20.3%) IPR015943 (20.2%)" "Lactonase, 7-bladed beta-propeller (20.3%) Cycloisomerase 2 (20.3%) WD40/YVTN repeat-like-containing domain superfamily (20.2%)" IIATRPGHTINNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.5.1.108 (52.4%) 4.2.1.59 (47.3%) 4.2.1.- (0.3%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase (52.4%) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (47.3%) Hydro-lyases (0.3%)" "GO:0009245 (14.5%) GO:0006633 (13.8%)" "GO:0016020 (14.5%) GO:0005737 (14.4%)" "GO:0103117 (14.5%) GO:0046872 (14%) GO:0019171 (11.1%)" "lipid A biosynthetic process (14.5%) fatty acid biosynthetic process (13.8%)" "membrane (14.5%) cytoplasm (14.4%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.5%) metal ion binding (14%) (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (11.1%)" "IPR004463 (14.5%) IPR011334 (14.5%) IPR020568 (14.5%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.5%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.5%) Ribosomal protein uS5 domain 2-type superfamily (14.5%)" IVGVDLPQNK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (16.8%) "GO:0005829 (16.8%) GO:0015935 (16.8%) GO:0005840 (0.1%)" "GO:0003735 (16.8%) GO:0019843 (16.7%) GO:0000049 (15.8%)" translation (16.8%) "cytosol (16.8%) small ribosomal subunit (16.8%) ribosome (0.1%)" "structural constituent of ribosome (16.8%) rRNA binding (16.7%) tRNA binding (15.8%)" "IPR001892 (20.1%) IPR010979 (20%) IPR019980 (20%)" "Small ribosomal subunit protein uS13 (20.1%) Small ribosomal subunit protein uS13-like, H2TH (20%) Small ribosomal subunit protein uS13, bacteria (20%)" ELTPAAVTGTLTTPVGR root "1.2.1.11 (99.7%) 1.2.1.- (0.1%) 1.2.1.38 (0.1%)" "aspartate-semialdehyde dehydrogenase (99.7%) With NAD(+) or NADP(+) as acceptor (0.1%) N-acetyl-gamma-glutamyl-phosphate reductase (0.1%)" "GO:0019877 (11.1%) GO:0009088 (10.9%) GO:0009089 (10.9%)" GO:0005829 (0%) "GO:0046983 (11.3%) GO:0004073 (11.3%) GO:0050661 (11.1%)" "diaminopimelate biosynthetic process (11.1%) threonine biosynthetic process (10.9%) lysine biosynthetic process via diaminopimelate (10.9%)" cytosol (0%) "protein dimerization activity (11.3%) aspartate-semialdehyde dehydrogenase activity (11.3%) NADP binding (11.1%)" "IPR012280 (17.2%) IPR000319 (16.9%) IPR011534 (16.6%)" "Semialdehyde dehydrogenase, dimerisation domain (17.2%) Aspartate-semialdehyde dehydrogenase, conserved site (16.9%) Aspartate-semialdehyde dehydrogenase, gamma-type (16.6%)" DMDKLGMGLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.5%) GO:0005737 (18.2%) "GO:0003746 (20.5%) GO:0003924 (20.5%) GO:0005525 (20.5%)" ribosome disassembly (20.5%) cytoplasm (18.2%) "translation elongation factor activity (20.5%) GTPase activity (20.5%) GTP binding (20.5%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" IGVQHDFIYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.25 (100%) 4-alpha-glucanotransferase (100%) GO:0005975 (25.2%) GO:0005737 (25.2%) "GO:0004134 (25.2%) GO:2001070 (23.8%) GO:0016757 (0.7%)" carbohydrate metabolic process (25.2%) cytoplasm (25.2%) "4-alpha-glucanotransferase activity (25.2%) starch binding (23.8%) glycosyltransferase activity (0.7%)" "IPR003385 (17.4%) IPR017853 (17.4%) IPR002044 (16.4%)" "Glycoside hydrolase, family 77 (17.4%) Glycoside hydrolase superfamily (17.4%) Carbohydrate binding module family 20 (16.4%)" YHIGSVAKVGESYGVLMSDVTQAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0044718 (2.4%) GO:0009279 (92.9%) "GO:0004180 (2.4%) GO:0015344 (2.4%)" siderophore transmembrane transport (2.4%) cell outer membrane (92.9%) "carboxypeptidase activity (2.4%) siderophore uptake transmembrane transporter activity (2.4%)" "IPR039426 (14.9%) IPR012910 (14.6%) IPR023996 (14.6%)" "TonB-dependent receptor-like (14.9%) TonB-dependent receptor, plug domain (14.6%) TonB-dependent outer membrane protein, SusC/RagA (14.6%)" SRPYLFSNSVAPAIVGASLEMFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.29 (97.3%) 2.3.1.50 (2.7%)" "glycine C-acetyltransferase (97.3%) serine C-palmitoyltransferase (2.7%)" "GO:0030148 (14.4%) GO:0019518 (13.9%) GO:0006567 (0.5%)" "GO:0005829 (14.4%) GO:0016020 (14.4%)" "GO:0008890 (14.4%) GO:0030170 (14.4%) GO:0004758 (7.2%)" "sphingolipid biosynthetic process (14.4%) L-threonine catabolic process to glycine (13.9%) L-threonine catabolic process (0.5%)" "cytosol (14.4%) membrane (14.4%)" "glycine C-acetyltransferase activity (14.4%) pyridoxal phosphate binding (14.4%) serine C-palmitoyltransferase activity (7.2%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" NVLNDHAVGVFSGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR011542 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufD (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" SDALPMPLGGLGIAIISTSSGLLTQK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0006412 (16.8%) "GO:0005840 (16.8%) GO:1990904 (16.8%) GO:0005737 (15.8%)" "GO:0003735 (16.8%) GO:0019843 (16.8%)" translation (16.8%) "ribosome (16.8%) ribonucleoprotein complex (16.8%) cytoplasm (15.8%)" "structural constituent of ribosome (16.8%) rRNA binding (16.8%)" "IPR000630 (50%) IPR035987 (50%)" "Small ribosomal subunit protein uS8 (50%) Small ribosomal subunit protein uS8 superfamily (50%)" LVPHQEAPTNICWGDR root "6.3.1.2 (80.9%) 6.3.1.- (19.1%)" "glutamine synthetase (80.9%) Acid--ammonia (or amine) ligases (amide synthases) (19.1%)" "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" "GO:0004356 (20%) GO:0016874 (0.1%)" "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" "glutamine synthetase activity (20%) ligase activity (0.1%)" "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" GKDIPEADRDYYLERR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.3.5.1 (94.4%) 1.3.5.4 (5.6%)" "succinate dehydrogenase (94.4%) Transferred entry: 1.3.5.1 (5.6%)" GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (13.8%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (13.8%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" FIDPILLHWKEEGSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.49 (100%) glucose-6-phosphate dehydrogenase (NADP(+)) (100%) "GO:0006006 (20%) GO:0009051 (20%)" GO:0005829 (20%) "GO:0004345 (20%) GO:0050661 (20%)" "glucose metabolic process (20%) pentose-phosphate shunt, oxidative branch (20%)" cytosol (20%) "glucose-6-phosphate dehydrogenase activity (20%) NADP binding (20%)" "IPR001282 (20%) IPR019796 (20%) IPR022674 (20%)" "Glucose-6-phosphate dehydrogenase (20%) Glucose-6-phosphate dehydrogenase, active site (20%) Glucose-6-phosphate dehydrogenase, NAD-binding (20%)" YRLPKEDPIDILEIDNTAVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (21.7%) GO:0005737 (21.7%) "GO:0004494 (21.7%) GO:0031419 (21.7%) GO:0046872 (13.4%)" propionate metabolic process, methylmalonyl pathway (21.7%) cytoplasm (21.7%) "methylmalonyl-CoA mutase activity (21.7%) cobalamin binding (21.7%) metal ion binding (13.4%)" "IPR006099 (22.4%) IPR016176 (22.4%) IPR006098 (13.8%)" "Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (22.4%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (22.4%) Methylmalonyl-CoA mutase, alpha chain, catalytic (13.8%)" LRPVVSIESVIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0016903 (92.9%) GO:0019164 (7.1%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (92.9%) pyruvate synthase activity (7.1%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" SITHQLYGGDWENR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.1 (100%) glycogen phosphorylase (100%) "GO:0005975 (32.8%) GO:0005978 (0.3%)" "GO:0030170 (33.1%) GO:0008184 (31.5%) GO:0004645 (1.7%)" "carbohydrate metabolic process (32.8%) glycogen biosynthetic process (0.3%)" "pyridoxal phosphate binding (33.1%) glycogen phosphorylase activity (31.5%) 1,4-alpha-oligoglucan phosphorylase activity (1.7%)" "IPR052182 (25.7%) IPR011834 (25.2%) IPR024517 (24.9%)" "Glycogen_Maltodextrin_Phosphorylase (25.7%) Alpha-glucan phosphorylase (25.2%) Glycogen phosphorylase, domain of unknown function DUF3417 (24.9%)" KGKVPMNIVAQR root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.5%) GO:0043335 (12.4%) GO:0051083 (12.4%)" "GO:0005737 (12%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003755 (12.5%) GO:0043022 (12.4%) GO:0044183 (12.4%)" "protein transport (12.5%) protein unfolding (12.4%) 'de novo' cotranslational protein folding (12.4%)" "cytoplasm (12%) cytosol (0%) membrane (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.5%) ribosome binding (12.4%) protein folding chaperone (12.4%)" "IPR008881 (12.8%) IPR036611 (12.8%) IPR005215 (12.7%)" "Trigger factor, ribosome-binding, bacterial (12.8%) Trigger factor ribosome-binding domain superfamily (12.8%) Trigger factor (12.7%)" GMTREELIGVNAGIVK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25.5%) GO:0006099 (23.3%) GO:0019752 (0.1%)" GO:0005737 (0.1%) "GO:0004459 (25.5%) GO:0030060 (25.3%) GO:0016491 (0.1%)" "lactate metabolic process (25.5%) tricarboxylic acid cycle (23.3%) carboxylic acid metabolic process (0.1%)" cytoplasm (0.1%) "L-lactate dehydrogenase (NAD+) activity (25.5%) L-malate dehydrogenase (NAD+) activity (25.3%) oxidoreductase activity (0.1%)" "IPR001236 (16.7%) IPR011275 (16.7%) IPR022383 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) Malate dehydrogenase, type 3 (16.7%) Lactate/malate dehydrogenase, C-terminal (16.7%)" TNQAITEGAIKEFIETLNVSEDIKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (28.2%) GO:0044208 (28.2%)" "GO:0004018 (28.2%) GO:0070626 (15.4%)" "'de novo' IMP biosynthetic process (28.2%) 'de novo' AMP biosynthetic process (28.2%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (28.2%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (15.4%)" "IPR000362 (12.5%) IPR004769 (12.5%) IPR008948 (12.5%)" "Fumarate lyase family (12.5%) Adenylosuccinate lyase (12.5%) L-Aspartase-like (12.5%)" FLETDIPVFGICLGHQLLALASGAK root "6.3.5.5 (99.8%) 6.3.4.16 (0.2%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (99.8%) carbamoyl-phosphate synthase (ammonia) (0.2%)" "GO:0006207 (15.5%) GO:0006541 (15.5%) GO:0006526 (15.4%)" "GO:0005951 (0.6%) GO:0005737 (0.1%) GO:0005829 (0%)" "GO:0004088 (16.1%) GO:0005524 (15.2%) GO:0004359 (5.2%)" "'de novo' pyrimidine nucleobase biosynthetic process (15.5%) glutamine metabolic process (15.5%) L-arginine biosynthetic process (15.4%)" "carbamoyl-phosphate synthase complex (0.6%) cytoplasm (0.1%) cytosol (0%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (16.1%) ATP binding (15.2%) glutaminase activity (5.2%)" "IPR017926 (14.6%) IPR029062 (14.6%) IPR035686 (14.5%)" "Glutamine amidotransferase (14.6%) Class I glutamine amidotransferase-like (14.6%) Carbamoyl-phosphate synthase small subunit, GATase1 domain (14.5%)" DTTTIIDGVGEEAAIQGR root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (16.6%) GO:1990220 (0.1%) GO:0005829 (0%)" "GO:0140662 (17%) GO:0005524 (16.9%) GO:0016853 (16.8%)" "protein refolding (17%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (16.6%) GroEL-GroES complex (0.1%) cytosol (0%)" "ATP-dependent protein folding chaperone (17%) ATP binding (16.9%) isomerase activity (16.8%)" "IPR001844 (16.9%) IPR027409 (16.9%) IPR002423 (16.7%)" "Chaperonin Cpn60/GroEL (16.9%) GroEL-like apical domain superfamily (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%)" GIENTSGPLGQGHTFAVGAAIAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.2.1.1 (96.9%) 2.2.1.- (3.1%)" "transketolase (96.9%) Transketolases and transaldolases (3.1%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%) GO:0047896 (0.2%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%) formaldehyde transketolase activity (0.2%)" "IPR005474 (12.8%) IPR029061 (12.8%) IPR033247 (12.8%)" "Transketolase, N-terminal (12.8%) Thiamin diphosphate-binding fold (12.8%) Transketolase family (12.8%)" SRVNFDQLLEAGVHFGHLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" ALTTMETATDVNAVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006457 (16.7%) GO:0005737 (16.7%) "GO:0000774 (16.7%) GO:0042803 (16.7%) GO:0051082 (16.7%)" protein folding (16.7%) cytoplasm (16.7%) "adenyl-nucleotide exchange factor activity (16.7%) protein homodimerization activity (16.7%) unfolded protein binding (16.7%)" "IPR000740 (33.3%) IPR009012 (33.3%) IPR013805 (33.3%)" "GrpE nucleotide exchange factor (33.3%) GrpE nucleotide exchange factor, head (33.3%) GrpE nucleotide exchange factor, coiled-coil (33.3%)" TGDIDPAVVFHLIR Bacillati Bacteria Bacillati "2.7.2.1 (98.3%) 2.7.2.7 (1.7%)" "acetate kinase (98.3%) butyrate kinase (1.7%)" "GO:0006083 (16.8%) GO:0006085 (16.5%)" GO:0005737 (16.5%) "GO:0005524 (16.8%) GO:0008776 (16.8%) GO:0000287 (16.5%)" "acetate metabolic process (16.8%) acetyl-CoA biosynthetic process (16.5%)" cytoplasm (16.5%) "ATP binding (16.8%) acetate kinase activity (16.8%) magnesium ion binding (16.5%)" "IPR000890 (25.5%) IPR004372 (25.3%) IPR043129 (25.3%)" "Aliphatic acid kinase, short-chain (25.5%) Acetate/propionate kinase (25.3%) ATPase, nucleotide binding domain (25.3%)" LGLEREEYTTQISNYDNLSAIFDAMKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (25.2%) GO:0044208 (25.2%) GO:0006188 (4.5%)" "GO:0004018 (29.7%) GO:0070626 (14.9%) GO:0016829 (0.5%)" "'de novo' IMP biosynthetic process (25.2%) 'de novo' AMP biosynthetic process (25.2%) IMP biosynthetic process (4.5%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (29.7%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (14.9%) lyase activity (0.5%)" "IPR000362 (12.5%) IPR004769 (12.5%) IPR008948 (12.5%)" "Fumarate lyase family (12.5%) Adenylosuccinate lyase (12.5%) L-Aspartase-like (12.5%)" VAVQSLHIIPGEEYLSLMNTDVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.99.1.3 (100%) sirohydrochlorin cobaltochelatase (100%) GO:0019251 (50%) GO:0016852 (50%) anaerobic cobalamin biosynthetic process (50%) sirohydrochlorin cobaltochelatase activity (50%) IPR010388 (100%) Anaerobic cobalt chelatase (100%) TILSISGKPGLYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016301 (100%) kinase activity (100%) "IPR041218 (25.1%) IPR049282 (25.1%) IPR049280 (24.9%)" "Domain of unknown function DUF5606 (25.1%) BVU_3817-like, N-terminal domain superfamily (25.1%) Domain of unknown function DUF6852 (24.9%)" GYEFINDIKGGVIPGEYIPAVDK root 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0032790 (16.8%) GO:0006414 (0%)" "GO:0005737 (15.8%) GO:0005829 (0.1%)" "GO:0003746 (17.3%) GO:0005525 (16.9%) GO:0003924 (16.3%)" "ribosome disassembly (16.8%) translational elongation (0%)" "cytoplasm (15.8%) cytosol (0.1%)" "translation elongation factor activity (17.3%) GTP binding (16.9%) GTPase activity (16.3%)" "IPR005517 (6.4%) IPR014721 (6.4%) IPR020568 (6.4%)" "Translation elongation factor EFG/EF2, domain IV (6.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.4%) Ribosomal protein uS5 domain 2-type superfamily (6.4%)" DQPLAGKPVLIQTSSMGVIGGAR root "1.6.5.2 (97.5%) 1.6.-.- (2.5%)" "NAD(P)H dehydrogenase (quinone) (97.5%) Acting on NADH or NADPH (2.5%)" "GO:0006805 (0.3%) GO:0051289 (0.3%)" GO:0005829 (31.9%) "GO:0010181 (31.9%) GO:0016491 (27.5%) GO:0050446 (3.9%)" "xenobiotic metabolic process (0.3%) protein homotetramerization (0.3%)" cytosol (31.9%) "FMN binding (31.9%) oxidoreductase activity (27.5%) azobenzene reductase (NADP+) activity (3.9%)" "IPR005025 (33.3%) IPR029039 (33.3%) IPR050712 (33.3%)" "NADPH-dependent FMN reductase-like domain (33.3%) Flavoprotein-like superfamily (33.3%) NAD(P)H-dependent reductase (33.3%)" TGAYIFDEQMVPNEKVQDFFKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR025379 (100%) Protein of unknown function DUF4295 (100%) NFPIDELVLFGSKR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11%) GO:0009089 (11%) GO:0009097 (11%)" GO:0016020 (0.1%) "GO:0051287 (11.2%) GO:0004073 (11%) GO:0046983 (11%)" "threonine biosynthetic process (11%) lysine biosynthetic process via diaminopimelate (11%) isoleucine biosynthetic process (11%)" membrane (0.1%) "NAD binding (11.2%) aspartate-semialdehyde dehydrogenase activity (11%) protein dimerization activity (11%)" "IPR000534 (18%) IPR036291 (18%) IPR005986 (17.9%)" "Semialdehyde dehydrogenase, NAD-binding (18%) NAD(P)-binding domain superfamily (18%) Aspartate-semialdehyde dehydrogenase, beta-type (17.9%)" DVILFPAMRPQK root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.7%) GO:0006418 (0%) GO:0034605 (0%)" "GO:0005829 (14.7%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0000049 (14.7%) GO:0004824 (14.7%) GO:0005524 (14.7%)" "lysyl-tRNA aminoacylation (14.7%) tRNA aminoacylation for protein translation (0%) cellular response to heat (0%)" "cytosol (14.7%) cytoplasm (0%) membrane (0%)" "tRNA binding (14.7%) lysine-tRNA ligase activity (14.7%) ATP binding (14.7%)" "IPR004364 (11.9%) IPR006195 (11.9%) IPR045864 (11.9%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (11.9%) Aminoacyl-tRNA synthetase, class II (11.9%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.9%)" SLNNQFASFIDKVR Craniata Eukaryota Metazoa Chordata Craniata "GO:0031424 (10.8%) GO:0045109 (10.8%) GO:0051290 (3.4%)" "GO:0045095 (13.9%) GO:0005615 (10%) GO:0005737 (8.9%)" "GO:0030280 (11%) GO:0046982 (3.4%) GO:0030246 (3.2%)" "keratinization (10.8%) intermediate filament organization (10.8%) protein heterotetramerization (3.4%)" "keratin filament (13.9%) extracellular space (10%) cytoplasm (8.9%)" "structural constituent of skin epidermis (11%) protein heterodimerization activity (3.4%) carbohydrate binding (3.2%)" "IPR032444 (22.1%) IPR039008 (22.1%) IPR003054 (21.9%)" "Keratin type II head (22.1%) Intermediate filament, rod domain (22.1%) Keratin, type II (21.9%)" DVDGFHPINVGR root "3.5.4.9 (50.2%) 1.5.1.5 (49.8%)" "methenyltetrahydrofolate cyclohydrolase (50.2%) methylenetetrahydrofolate dehydrogenase (NADP(+)) (49.8%)" "GO:0035999 (14.6%) GO:0000105 (13.8%) GO:0006164 (13.8%)" GO:0005829 (14.6%) "GO:0004477 (14.6%) GO:0004488 (14.6%) GO:0016787 (0%)" "tetrahydrofolate interconversion (14.6%) L-histidine biosynthetic process (13.8%) purine nucleotide biosynthetic process (13.8%)" cytosol (14.6%) "methenyltetrahydrofolate cyclohydrolase activity (14.6%) methylenetetrahydrofolate dehydrogenase (NADP+) activity (14.6%) hydrolase activity (0%)" "IPR000672 (16.8%) IPR020631 (16.8%) IPR020630 (16.7%)" "Tetrahydrofolate dehydrogenase/cyclohydrolase (16.8%) Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (16.8%) Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (16.7%)" GLILVDTKYEFGHRDGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" KQNAIAEYGSIVALSYVAAQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" FKAEVYILKKEEGGR root "3.6.5.3 (99.8%) 2.7.7.6 (0.2%)" "protein-synthesizing GTPase (99.8%) DNA-directed RNA polymerase (0.2%)" "GO:0032790 (0%) GO:0070125 (0%) GO:0006351 (0%)" "GO:0005829 (15.6%) GO:0032045 (11%) GO:0005737 (0.2%)" "GO:0003746 (16%) GO:0005525 (16%) GO:0003924 (15.4%)" "ribosome disassembly (0%) mitochondrial translational elongation (0%) DNA-templated transcription (0%)" "cytosol (15.6%) guanyl-nucleotide exchange factor complex (11%) cytoplasm (0.2%)" "translation elongation factor activity (16%) GTP binding (16%) GTPase activity (15.4%)" "IPR004160 (8.5%) IPR009001 (8.5%) IPR050055 (8.5%)" "Translation elongation factor EFTu/EF1A, C-terminal (8.5%) Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (8.5%) Elongation factor Tu GTPase (8.5%)" KYREELVGEANYAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (32.8%) "GO:0004476 (33.6%) GO:0008270 (33.6%)" carbohydrate metabolic process (32.8%) "mannose-6-phosphate isomerase activity (33.6%) zinc ion binding (33.6%)" "IPR011051 (16.8%) IPR014710 (16.8%) IPR046457 (16.8%)" "RmlC-like cupin domain superfamily (16.8%) RmlC-like jelly roll fold (16.8%) Phosphomannose isomerase type I, catalytic domain (16.8%)" NIGIMAHIDAGK root "3.6.5.- (83.3%) 3.6.5.3 (16.7%)" "Acting on GTP; involved in cellular and subcellular movement (83.3%) protein-synthesizing GTPase (16.7%)" "GO:0032790 (19.8%) GO:0032543 (1.7%) GO:0006412 (0.3%)" "GO:0005737 (16.7%) GO:0005759 (1.6%) GO:0009507 (0.6%)" "GO:0005525 (19.9%) GO:0003924 (19.9%) GO:0003746 (18.1%)" "ribosome disassembly (19.8%) mitochondrial translation (1.7%) translation (0.3%)" "cytoplasm (16.7%) mitochondrial matrix (1.6%) chloroplast (0.6%)" "GTP binding (19.9%) GTPase activity (19.9%) translation elongation factor activity (18.1%)" "IPR000795 (6.4%) IPR027417 (6.4%) IPR005225 (6.4%)" "Translational (tr)-type GTP-binding domain (6.4%) P-loop containing nucleoside triphosphate hydrolase (6.4%) Small GTP-binding domain (6.4%)" KGDIVFVNAGEDKGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR003256 (16.9%) IPR005824 (16.9%) IPR008991 (16.9%)" "Large ribosomal subunit protein uL24 (16.9%) KOW (16.9%) Translation protein SH3-like domain superfamily (16.9%)" ELFLSAPSELNIPYFNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005829 (50%) GO:0016491 (50%) cytosol (50%) oxidoreductase activity (50%) IPR004017 (100%) Cysteine-rich domain (100%) NALTEANGDIDKAMEIIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (48.6%) GO:0003746 (51.4%) cytoplasm (48.6%) translation elongation factor activity (51.4%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" TIDKSLLHLPSPTCVDDVWGNSDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (50%) GO:0004332 (50%) glycolytic process (50%) fructose-bisphosphate aldolase activity (50%) "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" NSELNSDDIKEFHKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" IELLEPTSEDSTIAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (48.1%) "GO:0004493 (48.1%) GO:0051213 (2.6%) GO:0016829 (1.3%)" L-methylmalonyl-CoA metabolic process (48.1%) "methylmalonyl-CoA epimerase activity (48.1%) dioxygenase activity (2.6%) lyase activity (1.3%)" "IPR037523 (25.3%) IPR051785 (25.3%) IPR017515 (24.7%)" "Vicinal oxygen chelate (VOC), core domain (25.3%) Methylmalonyl-CoA/ethylmalonyl-CoA epimerase (25.3%) Methylmalonyl-CoA epimerase (24.7%)" QSHQEMLNHVEGLLQKLELPYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (25%) GO:0005737 (25%) "GO:0004828 (25%) GO:0005524 (25%)" seryl-tRNA aminoacylation (25%) cytoplasm (25%) "serine-tRNA ligase activity (25%) ATP binding (25%)" "IPR002314 (13%) IPR002317 (13%) IPR006195 (13%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (13%) Serine-tRNA ligase, type1 (13%) Aminoacyl-tRNA synthetase, class II (13%)" AVEAFVSTVTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0030261 (11.8%) GO:0006270 (10.6%) GO:0006351 (10.6%)" "GO:0005829 (11.8%) GO:1990103 (10.6%) GO:1990178 (10.6%)" "GO:0003677 (11.8%) GO:0030527 (11.8%) GO:0042802 (10.6%)" "chromosome condensation (11.8%) DNA replication initiation (10.6%) DNA-templated transcription (10.6%)" "cytosol (11.8%) DnaA-HU complex (10.6%) HU-DNA complex (10.6%)" "DNA binding (11.8%) structural constituent of chromatin (11.8%) identical protein binding (10.6%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" VKPWGTNHAVLMGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016740 (100%) transferase activity (100%) "IPR029044 (92.6%) IPR005835 (7.4%)" "Nucleotide-diphospho-sugar transferases (92.6%) Nucleotidyl transferase domain (7.4%)" TGKFPQISATNKGEVQFVDLIGAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (37.5%) IPR012944 (37.5%) IPR033985 (25%)" "Tetratricopeptide-like helical domain superfamily (37.5%) RagB/SusD domain (37.5%) SusD-like, N-terminal (25%)" TAILNANYLAAK Pseudomonadati Bacteria Pseudomonadati 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" GQYAEAKPVFQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011659 (50%) IPR011990 (50%)" "WD40-like beta-propeller (50%) Tetratricopeptide-like helical domain superfamily (50%)" FKELFNTEGSLYTSPGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" FEKEMGTEKGNFDPTYLTHAAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006089 (32.7%) GO:1903457 (0.5%)" "GO:0046872 (33.2%) GO:0051539 (33.2%) GO:0004459 (0.5%)" "lactate metabolic process (32.7%) lactate catabolic process (0.5%)" "metal ion binding (33.2%) 4 iron, 4 sulfur cluster binding (33.2%) L-lactate dehydrogenase (NAD+) activity (0.5%)" "IPR003741 (13.7%) IPR004452 (13.7%) IPR009051 (13.7%)" "LUD domain (13.7%) L-lactate oxidation iron-sulfur protein LutB/LldF (13.7%) Alpha-helical ferredoxin (13.7%)" INLIDTPGHVDFTAEVER root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0032790 (20.4%) GO:0006412 (0.7%) GO:0032543 (0.1%)" "GO:0005737 (17.4%) GO:0005759 (0.3%) GO:0005739 (0.1%)" "GO:0003924 (20.5%) GO:0005525 (20.5%) GO:0003746 (19.7%)" "ribosome disassembly (20.4%) translation (0.7%) mitochondrial translation (0.1%)" "cytoplasm (17.4%) mitochondrial matrix (0.3%) mitochondrion (0.1%)" "GTPase activity (20.5%) GTP binding (20.5%) translation elongation factor activity (19.7%)" "IPR000795 (6.7%) IPR005225 (6.7%) IPR027417 (6.7%)" "Translational (tr)-type GTP-binding domain (6.7%) Small GTP-binding domain (6.7%) P-loop containing nucleoside triphosphate hydrolase (6.7%)" VCQVTGKRPVTGNNR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (32.9%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (32.6%) GO:0005840 (0.9%) GO:1990904 (0.4%)" "GO:0003735 (33%) GO:0019843 (0%)" "translation (32.9%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (32.6%) ribosome (0.9%) ribonucleoprotein complex (0.4%)" "structural constituent of ribosome (33%) rRNA binding (0%)" "IPR001383 (24.9%) IPR026569 (24.9%) IPR034704 (24.9%)" "Large ribosomal subunit protein bL28, bacteria (24.9%) Large ribosomal subunit protein bL28 (24.9%) Large ribosomal subunit protein bL28/bL31-like superfamily (24.9%)" AEPQVIEKLEINFR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" IEGVEHEFASVPGAREDVTNIILNLK VFQEAGLPDGVVNFIPGQGSVIGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (25%) GO:0009898 (25%) "GO:0003842 (25%) GO:0004657 (25%)" L-proline catabolic process to L-glutamate (25%) cytoplasmic side of plasma membrane (25%) "L-glutamate gamma-semialdehyde dehydrogenase activity (25%) proline dehydrogenase activity (25%)" "IPR005931 (14.3%) IPR015590 (14.3%) IPR016160 (14.3%)" "Delta-1-pyrroline-5-carboxylate dehydrogenase (14.3%) Aldehyde dehydrogenase domain (14.3%) Aldehyde dehydrogenase, cysteine active site (14.3%)" VADAFDQTNAPAQIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0016829 (100%) lyase activity (100%) IPR032149 (100%) Domain of unknown function DUF4988 (100%) ADKTSWVAEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0009055 (50%) GO:0010181 (50%)" "electron transfer activity (50%) FMN binding (50%)" "IPR008254 (25%) IPR010086 (25%) IPR029039 (25%)" "Flavodoxin/nitric oxide synthase (25%) Flavodoxin, long chain (25%) Flavoprotein-like superfamily (25%)" NFGVCHHSQPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "4.1.2.48 (66.7%) 4.1.2.5 (33.3%)" "low-specificity L-threonine aldolase (66.7%) L-threonine aldolase (33.3%)" GO:0006520 (44.2%) "GO:0016829 (44.2%) GO:0008483 (11.7%)" amino acid metabolic process (44.2%) "lyase activity (44.2%) transaminase activity (11.7%)" "IPR001597 (25%) IPR015421 (25%) IPR015422 (25%)" "Aromatic amino acid beta-eliminating lyase/threonine aldolase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%) Pyridoxal phosphate-dependent transferase, small domain (25%)" VDVQDLDADFFVFSGHK Pseudomonadati Bacteria Pseudomonadati 2.8.1.7 (100%) cysteine desulfurase (100%) GO:0006534 (31.9%) "GO:0030170 (31.9%) GO:0031071 (31.9%) GO:0008483 (2.9%)" cysteine metabolic process (31.9%) "pyridoxal phosphate binding (31.9%) cysteine desulfurase activity (31.9%) transaminase activity (2.9%)" "IPR000192 (16.9%) IPR010970 (16.9%) IPR015421 (16.9%)" "Aminotransferase class V domain (16.9%) Cysteine desulfurase, SufS (16.9%) Pyridoxal phosphate-dependent transferase, major domain (16.9%)" LAQFTSLQADLENGVNLEQTIR Bacteria Bacteria 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (26%) GO:0044814 (0.5%)" "GO:0005829 (34%) GO:0016020 (0.5%)" "GO:0008861 (34%) GO:0016829 (4.7%) GO:0016746 (0.5%)" "glucose metabolic process (26%) pyruvate fermentation via PFL (0.5%)" "cytosol (34%) membrane (0.5%)" "formate C-acetyltransferase activity (34%) lyase activity (4.7%) acyltransferase activity (0.5%)" "IPR004184 (23.5%) IPR050244 (23.5%) IPR005949 (18.1%)" "Pyruvate formate lyase domain (23.5%) Autonomous Glycyl Radical Cofactor (23.5%) Formate acetyltransferase (18.1%)" AKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVK root "4.2.1.11 (99.6%) 6.3.4.2 (0.4%)" "phosphopyruvate hydratase (99.6%) CTP synthase (glutamine hydrolyzing) (0.4%)" "GO:0006096 (16.7%) GO:0006396 (0.1%) GO:0006401 (0.1%)" "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (15.1%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.5%)" "glycolytic process (16.7%) RNA processing (0.1%) RNA catabolic process (0.1%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (15.1%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.5%)" "IPR000941 (16.9%) IPR020810 (16.9%) IPR036849 (16.9%)" "Enolase (16.9%) Enolase, C-terminal TIM barrel domain (16.9%) Enolase-like, C-terminal domain superfamily (16.9%)" SYGKKGEDVVNK Bacteria Bacteria "1.2.7.1 (75%) 1.2.7.- (21.4%) 1.2.1.51 (3.6%)" "pyruvate synthase (75%) With an iron-sulfur protein as acceptor (21.4%) pyruvate dehydrogenase (NADP(+)) (3.6%)" "GO:0006979 (14.8%) GO:0022900 (14.6%) GO:0044281 (11.8%)" "GO:0005506 (14.6%) GO:0051539 (14.6%) GO:0030976 (14.4%)" "response to oxidative stress (14.8%) electron transport chain (14.6%) small molecule metabolic process (11.8%)" "iron ion binding (14.6%) 4 iron, 4 sulfur cluster binding (14.6%) thiamine pyrophosphate binding (14.4%)" "IPR002869 (7.8%) IPR050722 (7.8%) IPR017896 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (7.7%)" NTEDENGNLDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0044718 (33.3%) GO:0009279 (33.3%) GO:0015344 (33.3%) siderophore transmembrane transport (33.3%) cell outer membrane (33.3%) siderophore uptake transmembrane transporter activity (33.3%) "IPR000531 (12.5%) IPR008969 (12.5%) IPR012910 (12.5%)" "TonB-dependent receptor-like, beta-barrel (12.5%) Carboxypeptidase-like, regulatory domain superfamily (12.5%) TonB-dependent receptor, plug domain (12.5%)" WTAIASAQVPQTDYAISGGVHDGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.3.1.1 (75%) 1.3.98.1 (25%)" "dihydrouracil dehydrogenase (NAD(+)) (75%) dihydroorotate oxidase (fumarate) (25%)" "GO:0006207 (24.2%) GO:0044205 (20.9%) GO:0006222 (2.2%)" GO:0005737 (24.2%) "GO:0004152 (20.9%) GO:0004159 (4.4%) GO:1990663 (3.3%)" "'de novo' pyrimidine nucleobase biosynthetic process (24.2%) 'de novo' UMP biosynthetic process (20.9%) UMP biosynthetic process (2.2%)" cytoplasm (24.2%) "dihydroorotate dehydrogenase activity (20.9%) dihydropyrimidine dehydrogenase (NAD+) activity (4.4%) dihydroorotate dehydrogenase (fumarate) activity (3.3%)" "IPR013785 (25.6%) IPR050074 (25.6%) IPR005720 (24.4%)" "Aldolase-type TIM barrel (25.6%) Dihydroorotate dehydrogenase (25.6%) Dihydroorotate dehydrogenase, catalytic (24.4%)" KITFLDTPGHEAFTAMR root "GO:0006353 (0.1%) GO:0031564 (0.1%) GO:0006413 (0%)" "GO:0005829 (18.3%) GO:0005737 (6.2%) GO:0009536 (0.1%)" "GO:0003743 (24.6%) GO:0003924 (24.4%) GO:0005525 (24.4%)" "DNA-templated transcription termination (0.1%) transcription antitermination (0.1%) translational initiation (0%)" "cytosol (18.3%) cytoplasm (6.2%) plastid (0.1%)" "translation initiation factor activity (24.6%) GTPase activity (24.4%) GTP binding (24.4%)" "IPR000795 (8.8%) IPR005225 (8.8%) IPR015760 (8.8%)" "Translational (tr)-type GTP-binding domain (8.8%) Small GTP-binding domain (8.8%) Translation initiation factor IF- 2 (8.8%)" TQLIDVIAEKAELSKTQAK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0030261 (11.7%) GO:0006270 (10.5%) GO:0006351 (10.5%)" "GO:0005829 (11.7%) GO:1990103 (10.5%) GO:1990178 (10.5%)" "GO:0003677 (12.1%) GO:0030527 (11.7%) GO:0042802 (10.5%)" "chromosome condensation (11.7%) DNA replication initiation (10.5%) DNA-templated transcription (10.5%)" "cytosol (11.7%) DnaA-HU complex (10.5%) HU-DNA complex (10.5%)" "DNA binding (12.1%) structural constituent of chromatin (11.7%) identical protein binding (10.5%)" "IPR000119 (33.6%) IPR010992 (33.6%) IPR020816 (32.8%)" "Histone-like DNA-binding protein (33.6%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.6%) Histone-like DNA-binding protein, conserved site (32.8%)" DIDFIAHSFVR Pseudomonadati Bacteria Pseudomonadati 2.7.1.40 (100%) pyruvate kinase (100%) "GO:0006950 (8.3%) GO:0006096 (0.1%)" "GO:0005737 (0.1%) GO:0005829 (0.1%)" "GO:0004743 (18.3%) GO:0016301 (18.3%) GO:0000287 (18.3%)" "response to stress (8.3%) glycolytic process (0.1%)" "cytoplasm (0.1%) cytosol (0.1%)" "pyruvate kinase activity (18.3%) kinase activity (18.3%) magnesium ion binding (18.3%)" "IPR001697 (11.2%) IPR015793 (11.2%) IPR018209 (11.2%)" "Pyruvate kinase (11.2%) Pyruvate kinase, barrel (11.2%) Pyruvate kinase, active site (11.2%)" KGAYFANPCMVQIHPTCVPVKGDFQSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (13.3%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (13.3%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" SDEKMIDDVLNHGYER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (8.3%) IPR003029 (8.3%) IPR004087 (8.3%)" "Exoribonuclease, phosphorolytic domain 1 (8.3%) S1 domain (8.3%) K Homology domain (8.3%)" EIGEALYDAYPDLDPK Bacteria Bacteria "GO:0016226 (33.1%) GO:0140647 (0.3%)" GO:0005829 (32.8%) "GO:0008198 (32.8%) GO:0004857 (0.3%) GO:0005506 (0.3%)" "iron-sulfur cluster assembly (33.1%) P450-containing electron transport chain (0.3%)" cytosol (32.8%) "ferrous iron binding (32.8%) enzyme inhibitor activity (0.3%) iron ion binding (0.3%)" "IPR007479 (48.8%) IPR036762 (48.8%) IPR001041 (0.4%)" "ISC system FeS cluster assembly, IscX (48.8%) IscX-like superfamily (48.8%) 2Fe-2S ferredoxin-type iron-sulfur binding domain (0.4%)" LRAANKFPAIIYGGK root "GO:0006412 (24.4%) GO:0000027 (0.2%) GO:0002181 (0.2%)" "GO:0022625 (24%) GO:0005840 (1%) GO:1990904 (0.6%)" "GO:0003735 (24.6%) GO:0008097 (24.2%)" "translation (24.4%) ribosomal large subunit assembly (0.2%) cytoplasmic translation (0.2%)" "cytosolic large ribosomal subunit (24%) ribosome (1%) ribonucleoprotein complex (0.6%)" "structural constituent of ribosome (24.6%) 5S rRNA binding (24.2%)" "IPR011035 (20.2%) IPR020056 (20.2%) IPR029751 (20.2%)" "Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (20.2%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (20.2%) Large ribosomal subunit protein bL25, L25 domain (20.2%)" MGPTAFAEAQWR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.2.1.49 (75%) 3.2.1.- (25%)" "alpha-N-acetylgalactosaminidase (75%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (25%)" "GO:0000166 (50%) GO:0016798 (45%) GO:0008456 (5%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (45%) alpha-N-acetylgalactosaminidase activity (5%)" "IPR000683 (17.4%) IPR006311 (17.4%) IPR036291 (17.4%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (17.4%) Twin-arginine translocation pathway, signal sequence (17.4%) NAD(P)-binding domain superfamily (17.4%)" VQRVPATETQGR root "5.3.1.9 (50%) 6.3.5.7 (50%)" "glucose-6-phosphate isomerase (50%) glutaminyl-tRNA synthase (glutamine-hydrolyzing) (50%)" "GO:0032543 (1.2%) GO:0070126 (0.4%) GO:0006415 (0.2%)" "GO:0005829 (24.3%) GO:0005737 (22.5%) GO:0005739 (1.5%)" "GO:0016149 (46.2%) GO:0003747 (2%) GO:0005524 (0.1%)" "mitochondrial translation (1.2%) mitochondrial translational termination (0.4%) translational termination (0.2%)" "cytosol (24.3%) cytoplasm (22.5%) mitochondrion (1.5%)" "translation release factor activity, codon specific (46.2%) translation release factor activity (2%) ATP binding (0.1%)" "IPR005139 (20.2%) IPR050057 (20.1%) IPR045853 (20.1%)" "Peptide chain release factor (20.2%) Prokaryotic/Mitochondrial Release Factor (20.1%) Peptide chain release factor class I superfamily (20.1%)" EQVILNTWYGGEMK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.6%) GO:0005829 (17.6%) "GO:0004612 (17.6%) GO:0005524 (17.6%) GO:0046872 (17.3%)" gluconeogenesis (17.6%) cytosol (17.6%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.6%) ATP binding (17.6%) metal ion binding (17.3%)" "IPR001272 (25.2%) IPR008210 (25.2%) IPR013035 (24.9%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.2%) Phosphoenolpyruvate carboxykinase, N-terminal (25.2%) Phosphoenolpyruvate carboxykinase, C-terminal (24.9%)" AQSVASYLLGCGVSNSQIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0016020 (100%) membrane (100%) "IPR006665 (25%) IPR036737 (25%) IPR039567 (25%)" "OmpA-like domain (25%) OmpA-like domain superfamily (25%) Glycine zipper domain (25%)" EGMPEDEQKNAEAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006415 (31.1%) GO:0006412 (2.2%)" GO:0005737 (33.3%) GO:0043023 (33.3%) "translational termination (31.1%) translation (2.2%)" cytoplasm (33.3%) ribosomal large subunit binding (33.3%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" GVIMDGDKPEHLLEAIPVMGCYCDIIGVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.1.3.11 (98%) 2.1.3.9 (2%)" "N-succinylornithine carbamoyltransferase (98%) N-acetylornithine carbamoyltransferase (2%)" "GO:0019240 (24.9%) GO:0042450 (24.9%) GO:0006526 (0.5%)" "GO:0004585 (24.9%) GO:0016597 (24.9%)" "citrulline biosynthetic process (24.9%) L-arginine biosynthetic process via ornithine (24.9%) L-arginine biosynthetic process (0.5%)" "ornithine carbamoyltransferase activity (24.9%) amino acid binding (24.9%)" "IPR006132 (20.2%) IPR036901 (20.2%) IPR006130 (19.8%)" "Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20.2%) Aspartate/ornithine carbamoyltransferase superfamily (20.2%) Aspartate/ornithine carbamoyltransferase (19.8%)" TLVATLPVFLNALTR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (10.5%) GO:0008564 (0.3%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (10.5%) protein-exporting ATPase activity (0.3%)" "IPR000185 (8%) IPR011115 (8%) IPR014018 (8%)" "Protein translocase subunit SecA (8%) SecA DEAD-like, N-terminal (8%) SecA motor DEAD (8%)" HPLYNKPVKR Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0006412 (25%) GO:0022627 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000266 (25%) IPR012340 (25%) IPR019979 (25%)" "Small ribosomal subunit protein uS17 (25%) Nucleic acid-binding, OB-fold (25%) Small ribosomal subunit protein uS17, conserved site (25%)" MDNFVQVAQQDVQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" IVPAIAIPHPLGNPK Bacillota Bacteria Bacillati Bacillota 1.21.4.2 (100%) glycine reductase (100%) GO:0030700 (33.3%) "GO:0030699 (33.3%) GO:0050485 (33.3%)" glycine reductase complex (33.3%) "glycine reductase activity (33.3%) oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor (33.3%)" "IPR010187 (66.7%) IPR010186 (33.3%)" "Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase (66.7%) Glycine reductase, selenoprotein B (33.3%)" LVLVDSVVKHELASSAYNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" AVGFENDKDILEIFNLAEDVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.8%) IPR007121 (7.8%) IPR007642 (7.8%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.8%) RNA polymerase, beta subunit, conserved site (7.8%) RNA polymerase Rpb2, domain 2 (7.8%)" YFLSQALGCNANEVEGMVIGGHGDTTMIPLAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (26.1%) GO:0006099 (23.9%)" "GO:0004459 (26.1%) GO:0030060 (23.6%) GO:0016491 (0.4%)" "lactate metabolic process (26.1%) tricarboxylic acid cycle (23.9%)" "L-lactate dehydrogenase (NAD+) activity (26.1%) L-malate dehydrogenase (NAD+) activity (23.6%) oxidoreductase activity (0.4%)" "IPR001236 (16.9%) IPR015955 (16.9%) IPR022383 (16.9%)" "Lactate/malate dehydrogenase, N-terminal (16.9%) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (16.9%) Lactate/malate dehydrogenase, C-terminal (16.9%)" ERPDVNVVLHFQSEYATAVSCMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.2.17 (100%) L-fuculose-phosphate aldolase (100%) GO:0019323 (33.3%) GO:0005829 (33.3%) "GO:0016832 (28.4%) GO:0008738 (4.9%)" pentose catabolic process (33.3%) cytosol (33.3%) "aldehyde-lyase activity (28.4%) L-fuculose-phosphate aldolase activity (4.9%)" "IPR001303 (33.3%) IPR036409 (33.3%) IPR050197 (33.3%)" "Class II aldolase/adducin N-terminal (33.3%) Class II aldolase/adducin N-terminal domain superfamily (33.3%) Aldolase class II family, sugar metabolism enzymes (33.3%)" KLLDQAQAGDNIGALIR Bacteria Bacteria 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0006414 (0.1%) "GO:0005829 (20.6%) GO:0005737 (0.3%)" "GO:0003746 (21.1%) GO:0005525 (20.9%) GO:0003924 (20.5%)" translational elongation (0.1%) "cytosol (20.6%) cytoplasm (0.3%)" "translation elongation factor activity (21.1%) GTP binding (20.9%) GTPase activity (20.5%)" "IPR009000 (8.6%) IPR050055 (8.6%) IPR004160 (8.5%)" "Translation protein, beta-barrel domain superfamily (8.6%) Elongation factor Tu GTPase (8.6%) Translation elongation factor EFTu/EF1A, C-terminal (8.5%)" VGGAFHSPLMDPAKVELEAAINATEFHTPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0004314 (100%) [acyl-carrier-protein] S-malonyltransferase activity (100%) "IPR001227 (14.3%) IPR004410 (14.3%) IPR014043 (14.3%)" "Acyl transferase domain superfamily (14.3%) Malonyl CoA-acyl carrier protein transacylase, FabD-type (14.3%) Acyl transferase domain (14.3%)" EGYIGLQDHGYPIWFR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0016787 (100%) hydrolase activity (100%) IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) TWNNIGMMAFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (51.4%) IPR019734 (48.6%)" "Tetratricopeptide-like helical domain superfamily (51.4%) Tetratricopeptide repeat (48.6%)" IQHNNAIGPYK Pseudomonadati Bacteria Pseudomonadati 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (26.1%) GO:0005829 (25.7%) "GO:0004354 (26.1%) GO:0000166 (22.1%)" glutamate biosynthetic process (26.1%) cytosol (25.7%) "glutamate dehydrogenase (NADP+) activity (26.1%) nucleotide binding (22.1%)" "IPR006096 (11.3%) IPR006097 (11.3%) IPR050724 (11.3%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.3%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.3%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.3%)" SEQTDLMQALYGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.3 (50%) 1.2.7.11 (33.3%) 1.2.-.- (16.7%)" "2-oxoglutarate synthase (50%) 2-oxoacid oxidoreductase (ferredoxin) (33.3%) Acting on the aldehyde or oxo group of donors (16.7%)" GO:0006979 (50%) "GO:0016903 (48.8%) GO:0047553 (1.2%)" response to oxidative stress (50%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors (48.8%) 2-oxoglutarate synthase activity (1.2%)" "IPR002869 (12.7%) IPR002880 (12.7%) IPR009014 (12.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.7%)" NMYNGTSGTELKGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.290 (66.7%) 1.1.1.95 (33.3%)" "4-phosphoerythronate dehydrogenase (66.7%) phosphoglycerate dehydrogenase (33.3%)" "GO:0051287 (50%) GO:0016616 (40%) GO:0033711 (6.7%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (40%) 4-phosphoerythronate dehydrogenase activity (6.7%)" "IPR006139 (33.3%) IPR006140 (33.3%) IPR036291 (33.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" TSAGALHTLPVCR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "2.1.1.- (96.7%) 2.1.1.185 (3.3%)" "Methyltransferases (96.7%) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (3.3%)" "GO:0032259 (20.1%) GO:0006396 (19.9%)" GO:0005829 (19.9%) "GO:0003723 (19.9%) GO:0008173 (19.9%) GO:0008168 (0.2%)" "methylation (20.1%) RNA processing (19.9%)" cytosol (19.9%) "RNA binding (19.9%) RNA methyltransferase activity (19.9%) methyltransferase activity (0.2%)" "IPR001537 (16.8%) IPR004441 (16.8%) IPR029026 (16.8%)" "tRNA/rRNA methyltransferase, SpoU type (16.8%) RNA methyltransferase TrmH (16.8%) tRNA (guanine-N1-)-methyltransferase, N-terminal (16.8%)" ELIIAELTEDKR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006629 (50%) GO:0016746 (50%) lipid metabolic process (50%) acyltransferase activity (50%) "IPR016181 (50%) IPR052351 (50%)" "Acyl-CoA N-acyltransferase (50%) L-ornithine N(alpha)-acyltransferase (50%)" RIEGISNANDESDREGMR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.6.2.2 (97.5%) 5.99.1.3 (2.5%)" "DNA topoisomerase (ATP-hydrolyzing) (97.5%) Transferred entry: 5.6.2.2 (2.5%)" "GO:0006261 (12.5%) GO:0006265 (12.5%)" "GO:0005694 (12.5%) GO:0005737 (12.5%) GO:0009330 (12.5%)" "GO:0003677 (12.5%) GO:0005524 (12.5%) GO:0034335 (12.5%)" "DNA-templated DNA replication (12.5%) DNA topological change (12.5%)" "chromosome (12.5%) cytoplasm (12.5%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.5%)" "DNA binding (12.5%) ATP binding (12.5%) DNA negative supercoiling activity (12.5%)" "IPR002205 (12.5%) IPR005743 (12.5%) IPR006691 (12.5%)" "DNA topoisomerase, type IIA, domain A (12.5%) DNA gyrase, subunit A (12.5%) DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.5%)" TGAYIFQEEMIPNEAVKDYFAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR025379 (100%) Protein of unknown function DUF4295 (100%) VVAHDASAAAHPGSAR LVEEWKELLPQAEIIPISAATK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0000028 (14.3%) "GO:0005829 (14.3%) GO:0005886 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%) GO:0043024 (14.3%)" ribosomal small subunit assembly (14.3%) "cytosol (14.3%) plasma membrane (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%) ribosomal small subunit binding (14.3%)" "IPR004044 (12.5%) IPR005225 (12.5%) IPR005662 (12.5%)" "K Homology domain, type 2 (12.5%) Small GTP-binding domain (12.5%) GTPase Era-like (12.5%)" KSTGFYQLIEFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (17.4%) "GO:0005737 (17.4%) GO:0005840 (17.4%) GO:1990904 (12.9%)" "GO:0003735 (17.4%) GO:0070181 (17.4%)" translation (17.4%) "cytoplasm (17.4%) ribosome (17.4%) ribonucleoprotein complex (12.9%)" "structural constituent of ribosome (17.4%) small ribosomal subunit rRNA binding (17.4%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" IWDSTDALELK root 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) "GO:0006103 (21.9%) GO:0006979 (20.7%) GO:0006090 (0.1%)" "GO:0005737 (12.5%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0004148 (21.9%) GO:0050660 (21.9%) GO:0016491 (0.2%)" "2-oxoglutarate metabolic process (21.9%) response to oxidative stress (20.7%) pyruvate metabolic process (0.1%)" "cytoplasm (12.5%) cytosol (0.1%) plasma membrane (0.1%)" "dihydrolipoyl dehydrogenase (NADH) activity (21.9%) flavin adenine dinucleotide binding (21.9%) oxidoreductase activity (0.2%)" "IPR023753 (12.8%) IPR036188 (12.8%) IPR050151 (12.8%)" "FAD/NAD(P)-binding domain (12.8%) FAD/NAD(P)-binding domain superfamily (12.8%) Class-I pyridine nucleotide-disulfide oxidoreductase (12.8%)" AEYTPHVDTGDYIIVLNADKVAVTGNK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.8%) GO:0017148 (19.8%) GO:0002181 (0%)" "GO:0022625 (19.8%) GO:0005840 (0.6%) GO:0005737 (0.1%)" "GO:0003735 (19.9%) GO:0003729 (19.8%) GO:0008270 (0%)" "translation (19.8%) negative regulation of translation (19.8%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (19.8%) ribosome (0.6%) cytoplasm (0.1%)" "structural constituent of ribosome (19.9%) mRNA binding (19.8%) zinc ion binding (0%)" "IPR005822 (25%) IPR005823 (25%) IPR036899 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13 superfamily (25%)" EYKEEIPALK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" NEASENSVWWTSDEYKNDNKPCTEEAWADLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (16.9%) GO:0005829 (16.9%) "GO:0004612 (16.9%) GO:0005524 (16.9%) GO:0046872 (16.9%)" gluconeogenesis (16.9%) cytosol (16.9%) "phosphoenolpyruvate carboxykinase (ATP) activity (16.9%) ATP binding (16.9%) metal ion binding (16.9%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" ANKLELIAASDLYKL Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR045739 (34.4%) IPR045865 (34.4%) IPR002912 (31.1%)" "ACT domain pair (34.4%) ACT-like domain (34.4%) ACT domain (31.1%)" NKLNDLEDALQQAKEDLAR Euarchontoglires Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Euarchontoglires "GO:0031424 (8.4%) GO:0045109 (8.4%) GO:0051290 (5.2%)" "GO:0045095 (10.5%) GO:0005615 (7.3%) GO:0001533 (5.5%)" "GO:0030280 (8.7%) GO:0046982 (5.2%) GO:0030246 (5%)" "keratinization (8.4%) intermediate filament organization (8.4%) protein heterotetramerization (5.2%)" "keratin filament (10.5%) extracellular space (7.3%) cornified envelope (5.5%)" "structural constituent of skin epidermis (8.7%) protein heterodimerization activity (5.2%) carbohydrate binding (5%)" "IPR003054 (20.2%) IPR018039 (20.2%) IPR039008 (20.2%)" "Keratin, type II (20.2%) Intermediate filament protein, conserved site (20.2%) Intermediate filament, rod domain (20.2%)" ALCEVKLPEFTDDVEAIKGAVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (16.7%) IPR014729 (16.7%) IPR017926 (16.7%)" "GMP synthase, C-terminal (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Glutamine amidotransferase (16.7%)" YLHDETGISENDIAKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" VGLINSGGESHGESDLHDAVVTAVVNKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (50%) GO:0004332 (50%) glycolytic process (50%) fructose-bisphosphate aldolase activity (50%) "IPR002915 (25.1%) IPR013785 (25.1%) IPR050456 (25.1%)" "DeoC/FbaB/LacD aldolase (25.1%) Aldolase-type TIM barrel (25.1%) DeoC/FbaB aldolase (25.1%)" LQPANPFTWASGWK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25.4%) GO:0044205 (25.3%) GO:0006222 (0.3%)" GO:0016020 (0.2%) "GO:0004588 (25.4%) GO:0000287 (23.3%) GO:0016757 (0.2%)" "pyrimidine nucleobase biosynthetic process (25.4%) 'de novo' UMP biosynthetic process (25.3%) UMP biosynthetic process (0.3%)" membrane (0.2%) "orotate phosphoribosyltransferase activity (25.4%) magnesium ion binding (23.3%) glycosyltransferase activity (0.2%)" "IPR000836 (25.1%) IPR029057 (25.1%) IPR004467 (24.9%)" "Phosphoribosyltransferase domain (25.1%) Phosphoribosyltransferase-like (25.1%) Orotate phosphoribosyl transferase domain (24.9%)" AEALKDSTDWKDTTDK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR007139 (100%) Protein of unknown function DUF349 (100%) VGDLSTEMIEHFFR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "4.2.1.19 (50.3%) 3.1.3.15 (49.6%) 2.6.1.9 (0.1%)" "imidazoleglycerol-phosphate dehydratase (50.3%) histidinol-phosphatase (49.6%) histidinol-phosphate transaminase (0.1%)" GO:0000105 (19.9%) GO:0005737 (19.8%) "GO:0004424 (19.9%) GO:0046872 (19.6%) GO:0004401 (19.5%)" L-histidine biosynthetic process (19.9%) cytoplasm (19.8%) "imidazoleglycerol-phosphate dehydratase activity (19.9%) metal ion binding (19.6%) histidinol-phosphatase activity (19.5%)" "IPR000807 (10.1%) IPR020565 (10.1%) IPR020568 (10.1%)" "Imidazoleglycerol-phosphate dehydratase (10.1%) Imidazoleglycerol-phosphate dehydratase, conserved site (10.1%) Ribosomal protein uS5 domain 2-type superfamily (10.1%)" GVNALLFNDLIPVYKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR016181 (50%) IPR039968 (50%)" "Acyl-CoA N-acyltransferase (50%) Bacterial ceramide synthase-like (50%)" LLPVLIETMGDAYPELIAQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR002318 (9.1%) IPR003156 (9.1%) IPR009000 (9.1%)" "Alanine-tRNA ligase, class IIc (9.1%) DHHA1 domain (9.1%) Translation protein, beta-barrel domain superfamily (9.1%)" LQGDINNDGKIDNNDLTSYTNYTGLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.2.1.177 (100%) alpha-D-xyloside xylohydrolase (100%) GO:0000272 (33.3%) "GO:0030246 (33.3%) GO:0004553 (29.2%) GO:0061634 (4.2%)" polysaccharide catabolic process (33.3%) "carbohydrate binding (33.3%) hydrolase activity, hydrolyzing O-glycosyl compounds (29.2%) alpha-D-xyloside xylohydrolase (4.2%)" "IPR000322 (6%) IPR000421 (6%) IPR002105 (6%)" "Glycoside hydrolase family 31, TIM barrel domain (6%) Coagulation factor 5/8, C-terminal domain (6%) Dockerin type I repeat (6%)" NSVLCIGEISNMGCTPEAIDAFIENK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (25%) GO:0005829 (25%) "GO:0000166 (25%) GO:0004354 (25%)" glutamate biosynthetic process (25%) cytosol (25%) "nucleotide binding (25%) glutamate dehydrogenase (NADP+) activity (25%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" ADLEPMTDKQPTASEVEDLLFANK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" AGAPFGPGANPMHGR Bacteria Bacteria 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (30.9%) GO:0005975 (0%) GO:0044814 (0%)" "GO:0005829 (32%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0008861 (32.1%) GO:0016829 (4.4%) GO:0016746 (0.4%)" "glucose metabolic process (30.9%) carbohydrate metabolic process (0%) pyruvate fermentation via PFL (0%)" "cytosol (32%) cytoplasm (0.1%) membrane (0%)" "formate C-acetyltransferase activity (32.1%) lyase activity (4.4%) acyltransferase activity (0.4%)" "IPR004184 (20.2%) IPR050244 (20.2%) IPR001150 (20.2%)" "Pyruvate formate lyase domain (20.2%) Autonomous Glycyl Radical Cofactor (20.2%) Glycine radical domain (20.2%)" EGIIQEALVETIGCSGMTHSAAMAAEILPGK Bacteria Bacteria LVEYHQMTAPLIGYYSK root 2.7.4.3 (100%) adenylate kinase (100%) "GO:0044209 (14.4%) GO:0006172 (0.2%) GO:0006270 (0.1%)" "GO:0005737 (27.5%) GO:0005829 (0.2%) GO:0005758 (0.1%)" "GO:0004017 (28%) GO:0005524 (27.9%) GO:0016301 (0.5%)" "AMP salvage (14.4%) ADP biosynthetic process (0.2%) DNA replication initiation (0.1%)" "cytoplasm (27.5%) cytosol (0.2%) mitochondrial intermembrane space (0.1%)" "AMP kinase activity (28%) ATP binding (27.9%) kinase activity (0.5%)" "IPR027417 (20.2%) IPR000850 (20.2%) IPR007862 (20%)" "P-loop containing nucleoside triphosphate hydrolase (20.2%) Adenylate kinase/UMP-CMP kinase (20.2%) Adenylate kinase, active site lid domain (20%)" LIITMPDTMSAERR Bacteria Bacteria 2.5.1.47 (100%) cysteine synthase (100%) GO:0006535 (43.2%) GO:0005737 (10.8%) "GO:0004124 (43.2%) GO:0016846 (2.7%)" cysteine biosynthetic process from serine (43.2%) cytoplasm (10.8%) "cysteine synthase activity (43.2%) carbon-sulfur lyase activity (2.7%)" "IPR001216 (16.7%) IPR001926 (16.7%) IPR005856 (16.7%)" "Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site (16.7%) Tryptophan synthase beta chain-like, PALP domain (16.7%) Cysteine synthase (16.7%)" IVCPANQPELLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) GO:0005975 (50%) GO:0004563 (50%) carbohydrate metabolic process (50%) beta-N-acetylhexosaminidase activity (50%) "IPR015882 (16.7%) IPR015883 (16.7%) IPR017853 (16.7%)" "Beta-hexosaminidase, bacterial type, N-terminal (16.7%) Glycoside hydrolase family 20, catalytic domain (16.7%) Glycoside hydrolase superfamily (16.7%)" GGLQFTYISLDDYR root "1.16.1.1 (79.3%) 1.-.-.- (14.9%) 1.8.1.4 (5.7%)" "mercury(II) reductase (79.3%) Oxidoreductases (14.9%) dihydrolipoyl dehydrogenase (5.7%)" "GO:0006979 (11.3%) GO:0045454 (0.1%) GO:1901530 (0.1%)" "GO:0016020 (0.1%) GO:0005634 (0.1%) GO:0005737 (0.1%)" "GO:0003955 (28.8%) GO:0050660 (28.8%) GO:0016668 (24.7%)" "response to oxidative stress (11.3%) cell redox homeostasis (0.1%) response to hypochlorite (0.1%)" "membrane (0.1%) nucleus (0.1%) cytoplasm (0.1%)" "NAD(P)H dehydrogenase (quinone) activity (28.8%) flavin adenine dinucleotide binding (28.8%) oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (24.7%)" "IPR036188 (16.2%) IPR016156 (16.1%) IPR023753 (16.1%)" "FAD/NAD(P)-binding domain superfamily (16.2%) FAD/NAD-linked reductase, dimerisation domain superfamily (16.1%) FAD/NAD(P)-binding domain (16.1%)" KEVINEAELIKLMEER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.95 (62.5%) 1.1.1.290 (25%) 1.1.1.81 (12.5%)" "phosphoglycerate dehydrogenase (62.5%) 4-phosphoerythronate dehydrogenase (25%) hydroxypyruvate reductase (12.5%)" "GO:0051287 (50%) GO:0016616 (39.7%) GO:0004617 (7.4%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (39.7%) phosphoglycerate dehydrogenase activity (7.4%)" "IPR006139 (33.3%) IPR006140 (33.3%) IPR036291 (33.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" VTPDMSTWRPCDQVESAVAWK YLGLPDEHKYAGMGVSACATCDGFFYR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.8.1.9 (100%) thioredoxin-disulfide reductase (NADPH) (100%) GO:0019430 (33.3%) GO:0005737 (33.3%) GO:0004791 (33.3%) removal of superoxide radicals (33.3%) cytoplasm (33.3%) thioredoxin-disulfide reductase (NADPH) activity (33.3%) "IPR005982 (20%) IPR008255 (20%) IPR023753 (20%)" "Thioredoxin reductase (20%) Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (20%) FAD/NAD(P)-binding domain (20%)" GVMLPHSCYLEAMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.2.1.3 (100%) long-chain-fatty-acid--CoA ligase (100%) GO:0016020 (50%) GO:0004467 (50%) membrane (50%) long-chain fatty acid-CoA ligase activity (50%) "IPR000873 (33.3%) IPR020845 (33.3%) IPR042099 (33.3%)" "AMP-dependent synthetase/ligase domain (33.3%) AMP-binding, conserved site (33.3%) ANL, N-terminal domain (33.3%)" KFGEQLQAGNNNNKTANFEDFAGPTGEA Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR021857 (100%) Protein of unknown function DUF3467 (100%) AGVPCVPGSDGPLGDDMDKNR root "6.3.4.14 (99.3%) 6.4.1.2 (0.7%)" "biotin carboxylase (99.3%) acetyl-CoA carboxylase (0.7%)" "GO:0006633 (17.2%) GO:2001295 (13.2%) GO:0045717 (0.1%)" "GO:0005737 (0.1%) GO:0005829 (0.1%) GO:0009317 (0.1%)" "GO:0005524 (19%) GO:0046872 (18.6%) GO:0004075 (12.8%)" "fatty acid biosynthetic process (17.2%) malonyl-CoA biosynthetic process (13.2%) negative regulation of fatty acid biosynthetic process (0.1%)" "cytoplasm (0.1%) cytosol (0.1%) acetyl-CoA carboxylase complex (0.1%)" "ATP binding (19%) metal ion binding (18.6%) biotin carboxylase activity (12.8%)" "IPR005479 (10.3%) IPR011764 (10.3%) IPR005481 (10.2%)" "Carbamoyl phosphate synthase, ATP-binding domain (10.3%) Biotin carboxylation domain (10.3%) Biotin carboxylase-like, N-terminal domain (10.2%)" SGVAHFAVDTEEDGLQLIRK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0015977 (23.2%) GO:0009317 (23.2%) "GO:0003989 (23.2%) GO:0004658 (23.2%) GO:0016740 (7.1%)" carbon fixation (23.2%) acetyl-CoA carboxylase complex (23.2%) "acetyl-CoA carboxylase activity (23.2%) propionyl-CoA carboxylase activity (23.2%) transferase activity (7.1%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" ASVALSGLTVAESFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "7.1.2.2 (98.3%) 3.6.3.14 (1.7%)" "H(+)-transporting two-sector ATPase (98.3%) Transferred entry: 7.1.2.2 (1.7%)" "GO:0045259 (22.4%) GO:0005886 (22%)" "GO:0005524 (22.4%) GO:0046933 (22.4%) GO:0016787 (9.7%)" "proton-transporting ATP synthase complex (22.4%) plasma membrane (22%)" "ATP binding (22.4%) proton-transporting ATP synthase activity, rotational mechanism (22.4%) hydrolase activity (9.7%)" "IPR000194 (10%) IPR003593 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" IATVTNFPHGNDDIEIALAETR root "4.1.2.4 (99.6%) 4.-.-.- (0.4%)" "deoxyribose-phosphate aldolase (99.6%) Lyases (0.4%)" "GO:0009264 (20%) GO:0016052 (19.9%) GO:0006018 (19.2%)" "GO:0005737 (19.9%) GO:0005829 (0.1%)" "GO:0004139 (20%) GO:0016829 (0.4%) GO:0004645 (0.1%)" "deoxyribonucleotide catabolic process (20%) carbohydrate catabolic process (19.9%) 2-deoxyribose 1-phosphate catabolic process (19.2%)" "cytoplasm (19.9%) cytosol (0.1%)" "deoxyribose-phosphate aldolase activity (20%) lyase activity (0.4%) 1,4-alpha-oligoglucan phosphorylase activity (0.1%)" "IPR002915 (25%) IPR011343 (25%) IPR013785 (24.9%)" "DeoC/FbaB/LacD aldolase (25%) Deoxyribose-phosphate aldolase (25%) Aldolase-type TIM barrel (24.9%)" ASPSLLDGIVVEYYGTPTPLR Bacteria Bacteria "GO:0002184 (33.2%) GO:0006412 (0.1%)" "GO:0005829 (33.2%) GO:0005737 (0.1%)" "GO:0043023 (33.2%) GO:0003746 (0.1%)" "cytoplasmic translational termination (33.2%) translation (0.1%)" "cytosol (33.2%) cytoplasm (0.1%)" "ribosomal large subunit binding (33.2%) translation elongation factor activity (0.1%)" "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" YNVFSPSMIDGIIHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" SLFPFLNLMFPSVNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.7%) GO:0006516 (19.7%)" GO:0005829 (19.7%) "GO:0000224 (19.7%) GO:0030246 (19.7%) GO:0016798 (1.5%)" "carbohydrate metabolic process (19.7%) glycoprotein catabolic process (19.7%)" cytosol (19.7%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.7%) carbohydrate binding (19.7%) hydrolase activity, acting on glycosyl bonds (1.5%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" GGAAEWDVHDGVFTVNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0016787 (87.5%) GO:0046872 (12.5%)" "hydrolase activity (87.5%) metal ion binding (12.5%)" IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) IKEQVDELVQELMAAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis NTEDLSSYLKR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006526 (15.7%) GO:0006207 (15.6%) GO:0006541 (15.6%)" "GO:0005951 (0.3%) GO:0005737 (0%) GO:0005829 (0%)" "GO:0004088 (16.2%) GO:0005524 (16%) GO:0004359 (3.9%)" "L-arginine biosynthetic process (15.7%) 'de novo' pyrimidine nucleobase biosynthetic process (15.6%) glutamine metabolic process (15.6%)" "carbamoyl-phosphate synthase complex (0.3%) cytoplasm (0%) cytosol (0%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (16.2%) ATP binding (16%) glutaminase activity (3.9%)" "IPR002474 (14.7%) IPR036480 (14.7%) IPR029062 (14.4%)" "Carbamoyl-phosphate synthase small subunit, N-terminal domain (14.7%) Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily (14.7%) Class I glutamine amidotransferase-like (14.4%)" SAMLSNMACSLIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.3%) IPR036373 (33.3%) IPR047859 (33.3%)" "Large ribosomal subunit protein bL17 (33.3%) Large ribosomal subunit protein bL17 superfamily (33.3%) Large ribosomal subunit protein bL17, conserved site (33.3%)" NTTAPAEEWIAGGVPITMMMNMER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.2%) GO:0009749 (14.2%)" GO:0005829 (14.2%) "GO:0003872 (14.2%) GO:0005524 (14.2%) GO:0046872 (14.2%)" "fructose 6-phosphate metabolic process (14.2%) response to glucose (14.2%)" cytosol (14.2%) "6-phosphofructokinase activity (14.2%) ATP binding (14.2%) metal ion binding (14.2%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" IVINQGLGMAVADKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.9%) "GO:0005840 (16.9%) GO:1990904 (16.7%) GO:0022625 (0.2%)" "GO:0003735 (16.9%) GO:0000049 (16.2%) GO:0019843 (16.2%)" translation (16.9%) "ribosome (16.9%) ribonucleoprotein complex (16.7%) cytosolic large ribosomal subunit (0.2%)" "structural constituent of ribosome (16.9%) tRNA binding (16.2%) rRNA binding (16.2%)" "IPR002132 (20%) IPR022803 (20%) IPR031309 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5 domain superfamily (20%) Large ribosomal subunit protein uL5, C-terminal (20%)" VDALGHVDRPIPTMLNYATHIKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" FADPFYGLGTPVKPLKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (50%) GO:0016491 (44.1%) GO:0050112 (5.9%)" "nucleotide binding (50%) oxidoreductase activity (44.1%) inositol 2-dehydrogenase (NAD+) activity (5.9%)" "IPR000683 (21.3%) IPR036291 (21.3%) IPR043906 (21.3%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (21.3%) NAD(P)-binding domain superfamily (21.3%) Gfo/Idh/MocA-like oxidoreductase, bacterial type, C-terminal (21.3%)" TEEYFMSENMR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (10.7%) GO:0008564 (0.4%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (10.7%) protein-exporting ATPase activity (0.4%)" "IPR000185 (7.8%) IPR011115 (7.8%) IPR011130 (7.8%)" "Protein translocase subunit SecA (7.8%) SecA DEAD-like, N-terminal (7.8%) SecA, preprotein cross-linking domain (7.8%)" IIQQVQPDEIYNLAAQSHVK Bacteria Bacteria 4.2.1.47 (100%) GDP-mannose 4,6-dehydratase (100%) GO:0042351 (33.5%) "GO:0008446 (33.5%) GO:0070401 (32.6%) GO:0016829 (0.4%)" 'de novo' GDP-L-fucose biosynthetic process (33.5%) "GDP-mannose 4,6-dehydratase activity (33.5%) NADP+ binding (32.6%) lyase activity (0.4%)" "IPR006368 (33.4%) IPR016040 (33.4%) IPR036291 (33.2%)" "GDP-mannose 4,6-dehydratase (33.4%) NAD(P)-binding domain (33.4%) NAD(P)-binding domain superfamily (33.2%)" ILDAAYEAAKGDAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.6%) GO:0046040 (16.6%)" GO:0005737 (16.6%) "GO:0004019 (16.6%) GO:0005525 (16.6%) GO:0000287 (15.5%)" "'de novo' AMP biosynthetic process (16.6%) IMP metabolic process (16.6%)" cytoplasm (16.6%) "adenylosuccinate synthase activity (16.6%) GTP binding (16.6%) magnesium ion binding (15.5%)" "IPR001114 (14.5%) IPR027417 (14.5%) IPR033128 (14.5%)" "Adenylosuccinate synthetase (14.5%) P-loop containing nucleoside triphosphate hydrolase (14.5%) Adenylosuccinate synthase, active site (14.5%)" LVADSITSQLER root "GO:0006412 (19.9%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (19.9%) GO:0005840 (0.3%) GO:0015934 (0.1%)" "GO:0003735 (20%) GO:0019843 (20%) GO:0003729 (19.7%)" "translation (19.9%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (19.9%) ribosome (0.3%) large ribosomal subunit (0.1%)" "structural constituent of ribosome (20%) rRNA binding (20%) mRNA binding (19.7%)" "IPR004044 (11.2%) IPR009019 (11.2%) IPR015946 (11.2%)" "K Homology domain, type 2 (11.2%) K homology domain superfamily, prokaryotic type (11.2%) K homology domain-like, alpha/beta (11.2%)" SAAAVHKTNEALKEVGAL Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25%) GO:0006099 (25%)" "GO:0004459 (25%) GO:0030060 (25%)" "lactate metabolic process (25%) tricarboxylic acid cycle (25%)" "L-lactate dehydrogenase (NAD+) activity (25%) L-malate dehydrogenase (NAD+) activity (25%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR011275 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 3 (16.7%)" MEYSSYNVNTPQWR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.1%) "GO:0008184 (33.1%) GO:0030170 (33.1%) GO:0016757 (0.6%)" carbohydrate metabolic process (33.1%) "glycogen phosphorylase activity (33.1%) pyridoxal phosphate binding (33.1%) glycosyltransferase activity (0.6%)" "IPR024517 (25.2%) IPR052182 (25.2%) IPR000811 (24.8%)" "Glycogen phosphorylase, domain of unknown function DUF3417 (25.2%) Glycogen_Maltodextrin_Phosphorylase (25.2%) Glycosyl transferase, family 35 (24.8%)" YTFDGETVTLSPSQGVNQLHGGPEGFDK root 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%) GO:0016853 (0.2%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%) isomerase activity (0.2%)" "IPR008183 (14.8%) IPR011013 (14.8%) IPR014718 (14.8%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (14.8%) Galactose mutarotase-like domain superfamily (14.8%) Glycoside hydrolase-type carbohydrate-binding (14.8%)" MNNYETVFILTPVLSDAQMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.3%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.3%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" ITDKDIQINIFEVK Pseudomonadati Bacteria Pseudomonadati GO:0006412 (21%) GO:0022627 (21%) "GO:0003735 (21%) GO:0019843 (20.4%) GO:0003729 (15.9%)" translation (21%) cytosolic small ribosomal subunit (21%) "structural constituent of ribosome (21%) rRNA binding (20.4%) mRNA binding (15.9%)" "IPR001351 (11.5%) IPR004044 (11.5%) IPR009019 (11.5%)" "Small ribosomal subunit protein uS3, C-terminal (11.5%) K Homology domain, type 2 (11.5%) K homology domain superfamily, prokaryotic type (11.5%)" GGVIVYPTDSGYALGCK root "2.7.7.87 (96.4%) 3.1.3.97 (3.6%)" "L-threonylcarbamoyladenylate synthase (96.4%) 3',5'-nucleoside bisphosphate phosphatase (3.6%)" "GO:0006364 (0.3%) GO:0001522 (0.1%)" GO:0005829 (0.4%) "GO:0003725 (90.5%) GO:0016779 (6.3%) GO:0061710 (1.2%)" "rRNA processing (0.3%) pseudouridine synthesis (0.1%)" cytosol (0.4%) "double-stranded RNA binding (90.5%) nucleotidyltransferase activity (6.3%) L-threonylcarbamoyladenylate synthase (1.2%)" "IPR017945 (33.2%) IPR006070 (33.1%) IPR052532 (33%)" "DHBP synthase RibB-like alpha/beta domain superfamily (33.2%) Threonylcarbamoyl-AMP synthase-like domain (33.1%) SUA5 domain-containing protein (33%)" SYVVSMLDGDALREIIEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.21 (100%) phosphoribosylglycinamide formyltransferase 2 (100%) GO:0006189 (16.7%) GO:0005829 (16.7%) "GO:0000287 (16.7%) GO:0004644 (16.7%) GO:0005524 (16.7%)" 'de novo' IMP biosynthetic process (16.7%) cytosol (16.7%) "magnesium ion binding (16.7%) phosphoribosylglycinamide formyltransferase activity (16.7%) ATP binding (16.7%)" "IPR003135 (12.5%) IPR005862 (12.5%) IPR011054 (12.5%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.5%) Formate-dependent phosphoribosylglycinamide formyltransferase (12.5%) Rudiment single hybrid motif (12.5%)" RQPVTEAVITVPAYFSDSQR LTWLNVNDALSIDGK Pseudomonadati Bacteria Pseudomonadati GO:0061077 (0.9%) "GO:0042597 (96.3%) GO:0030288 (0.9%)" "GO:0042803 (0.9%) GO:0060241 (0.9%)" obsolete chaperone-mediated protein folding (0.9%) "periplasmic space (96.3%) outer membrane-bounded periplasmic space (0.9%)" "protein homodimerization activity (0.9%) lysozyme inhibitor activity (0.9%)" "IPR036501 (51.4%) IPR014453 (48.6%)" "Inhibitor of vertebrate lysozyme superfamily (51.4%) Inhibitor of vertebrate lysozyme (48.6%)" ESGRADDNEETIKKR Bacteria Bacteria "2.7.4.3 (96.3%) 2.7.4.- (3.7%)" "adenylate kinase (96.3%) Phosphotransferases with a phosphate group as acceptor (3.7%)" "GO:0044209 (22.6%) GO:0006139 (0.8%)" GO:0005737 (24.4%) "GO:0005524 (25.9%) GO:0004017 (25.2%) GO:0019205 (0.8%)" "AMP salvage (22.6%) nucleobase-containing compound metabolic process (0.8%)" cytoplasm (24.4%) "ATP binding (25.9%) AMP kinase activity (25.2%) nucleobase-containing compound kinase activity (0.8%)" "IPR000850 (30.8%) IPR027417 (30.8%) IPR033690 (30.8%)" "Adenylate kinase/UMP-CMP kinase (30.8%) P-loop containing nucleoside triphosphate hydrolase (30.8%) Adenylate kinase, conserved site (30.8%)" KEPDTVEFLSGIFEGK Bacteroidota Bacteria Pseudomonadati Bacteroidota 4.2.3.5 (100%) chorismate synthase (100%) "GO:0008652 (16.7%) GO:0009073 (16.7%) GO:0009423 (16.7%)" GO:0005829 (16.7%) "GO:0004107 (16.7%) GO:0010181 (16.7%)" "amino acid biosynthetic process (16.7%) aromatic amino acid family biosynthetic process (16.7%) chorismate biosynthetic process (16.7%)" cytosol (16.7%) "chorismate synthase activity (16.7%) FMN binding (16.7%)" "IPR000453 (33.3%) IPR020541 (33.3%) IPR035904 (33.3%)" "Chorismate synthase (33.3%) Chorismate synthase, conserved site (33.3%) Chorismate synthase AroC superfamily (33.3%)" HKIINVLGSNDKL Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.6%) GO:0030388 (24.6%)" GO:0016020 (1.5%) "GO:0004332 (24.6%) GO:0008270 (24.6%)" "glycolytic process (24.6%) fructose 1,6-bisphosphate metabolic process (24.6%)" membrane (1.5%) "fructose-bisphosphate aldolase activity (24.6%) zinc ion binding (24.6%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" AIAQMAGTEYGKNEQNDIAMR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.2%) GO:0005737 (14.2%) "GO:0000049 (14.2%) GO:0002161 (14.2%) GO:0004813 (14.2%)" alanyl-tRNA aminoacylation (14.2%) cytoplasm (14.2%) "tRNA binding (14.2%) aminoacyl-tRNA deacylase activity (14.2%) alanine-tRNA ligase activity (14.2%)" "IPR002318 (9.1%) IPR003156 (9.1%) IPR009000 (9.1%)" "Alanine-tRNA ligase, class IIc (9.1%) DHHA1 domain (9.1%) Translation protein, beta-barrel domain superfamily (9.1%)" LPLNQVGSLNK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006352 (33.3%) GO:0006355 (0.1%)" GO:1903865 (0.1%) "GO:0016987 (33%) GO:0003677 (32.9%) GO:0003700 (0.3%)" "DNA-templated transcription initiation (33.3%) regulation of DNA-templated transcription (0.1%)" sigma factor antagonist complex (0.1%) "sigma factor activity (33%) DNA binding (32.9%) DNA-binding transcription factor activity (0.3%)" "IPR014284 (10.1%) IPR050239 (10.1%) IPR000943 (10%)" "RNA polymerase sigma-70-like domain (10.1%) Sigma-70 factor family, RNA polymerase initiation factors (10.1%) RNA polymerase sigma-70 (10%)" DLVHAIPLYAIK root "4.2.1.3 (51.6%) 4.2.1.99 (48.4%)" "aconitate hydratase (51.6%) 2-methylisocitrate dehydratase (48.4%)" "GO:0006099 (12.5%) GO:0019629 (12.5%) GO:0006097 (0%)" "GO:0005829 (12.5%) GO:0016020 (0%)" "GO:0003994 (12.5%) GO:0047456 (12.5%) GO:0051539 (12.5%)" "tricarboxylic acid cycle (12.5%) propionate catabolic process, 2-methylcitrate cycle (12.5%) glyoxylate cycle (0%)" "cytosol (12.5%) membrane (0%)" "aconitate hydratase activity (12.5%) 2-methylisocitrate dehydratase activity (12.5%) 4 iron, 4 sulfur cluster binding (12.5%)" "IPR036008 (9.3%) IPR050926 (9.3%) IPR001030 (9.2%)" "Aconitase, iron-sulfur domain (9.3%) Aconitase/IPM Isomerase (9.3%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (9.2%)" IQLVGDDLFVTNTERLER Bacillota Bacteria Bacillati Bacillota 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" LSELFFNENGDRFYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR027848 (100%) Protein of unknown function DUF4494 (100%) LDCLDLEGMDKLFTKYPGIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR005886 (33.3%) IPR036291 (33.3%) IPR001509 (26.7%)" "UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD-dependent epimerase/dehydratase (26.7%)" AAEEFDYADVDHLGSYRK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.2.10 (92.9%) 5.4.2.2 (7.1%)" "phosphoglucosamine mutase (92.9%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (7.1%)" "GO:0005975 (14%) GO:0006048 (14%) GO:0009252 (14%)" GO:0005829 (14%) "GO:0000287 (14%) GO:0004615 (14%) GO:0008966 (14%)" "carbohydrate metabolic process (14%) UDP-N-acetylglucosamine biosynthetic process (14%) peptidoglycan biosynthetic process (14%)" cytosol (14%) "magnesium ion binding (14%) phosphomannomutase activity (14%) phosphoglucosamine mutase activity (14%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" VTTVHNAVEPLSPEILAIPDKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.4.1.11 (100%) glycogen(starch) synthase (100%) GO:0009103 (50%) "GO:0016757 (40%) GO:0004373 (10%)" lipopolysaccharide biosynthetic process (50%) "glycosyltransferase activity (40%) alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (10%)" "IPR001296 (50%) IPR028098 (50%)" "Glycosyl transferase, family 1 (50%) Glycosyltransferase subfamily 4-like, N-terminal domain (50%)" HFYFLEMNTR root "6.3.4.14 (93.7%) 6.4.1.2 (3.6%) 6.4.1.3 (1.4%)" "biotin carboxylase (93.7%) acetyl-CoA carboxylase (3.6%) propionyl-CoA carboxylase (1.4%)" "GO:0006633 (11.1%) GO:2001295 (9.1%) GO:0016042 (0.4%)" "GO:0005739 (0.7%) GO:0005759 (0.2%)" "GO:0005524 (22.6%) GO:0046872 (22.6%) GO:0016874 (11%)" "fatty acid biosynthetic process (11.1%) malonyl-CoA biosynthetic process (9.1%) lipid catabolic process (0.4%)" "mitochondrion (0.7%) mitochondrial matrix (0.2%)" "ATP binding (22.6%) metal ion binding (22.6%) ligase activity (11%)" "IPR005479 (10.8%) IPR005482 (10.8%) IPR011054 (10.8%)" "Carbamoyl phosphate synthase, ATP-binding domain (10.8%) Biotin carboxylase, C-terminal (10.8%) Rudiment single hybrid motif (10.8%)" ITESEFLWQHNQDPMAVDK root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (24.4%) GO:0009052 (0.1%)" "GO:0005829 (24.6%) GO:0016020 (0.1%)" "GO:0004801 (25.1%) GO:0016740 (0.6%) GO:0016744 (0.1%)" "carbohydrate metabolic process (25%) pentose-phosphate shunt (24.4%) pentose-phosphate shunt, non-oxidative branch (0.1%)" "cytosol (24.6%) membrane (0.1%)" "transaldolase activity (25.1%) transferase activity (0.6%) transketolase or transaldolase activity (0.1%)" "IPR013785 (25.8%) IPR001585 (25.6%) IPR018225 (24.4%)" "Aldolase-type TIM barrel (25.8%) Transaldolase/Fructose-6-phosphate aldolase (25.6%) Transaldolase, active site (24.4%)" TMQEAPKYDDVFAEVNR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.5.1.15 (100%) dihydropteroate synthase (100%) "GO:0046654 (20%) GO:0046656 (19.8%) GO:0009410 (0%)" "GO:0005829 (20%) GO:0005737 (0%)" "GO:0004156 (20%) GO:0046872 (19.8%) GO:0016740 (0.2%)" "tetrahydrofolate biosynthetic process (20%) folic acid biosynthetic process (19.8%) response to xenobiotic stimulus (0%)" "cytosol (20%) cytoplasm (0%)" "dihydropteroate synthase activity (20%) metal ion binding (19.8%) transferase activity (0.2%)" "IPR000489 (25.1%) IPR011005 (25.1%) IPR045031 (25.1%)" "Pterin-binding domain (25.1%) Dihydropteroate synthase-like superfamily (25.1%) Dihydropteroate synthase-like (25.1%)" HNLPHNSLNFVFHGGSGSTAQEIK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006094 (19.9%) GO:0006096 (19.9%)" GO:0005829 (19.9%) "GO:0004332 (19.9%) GO:0008270 (19.9%) GO:0016829 (0.2%)" "gluconeogenesis (19.9%) glycolytic process (19.9%)" cytosol (19.9%) "fructose-bisphosphate aldolase activity (19.9%) zinc ion binding (19.9%) lyase activity (0.2%)" "IPR000771 (33.3%) IPR006411 (33.3%) IPR013785 (33.3%)" "Fructose-bisphosphate aldolase, class-II (33.3%) Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype (33.3%) Aldolase-type TIM barrel (33.3%)" MDDTILNFNYPTDTPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0000917 (14.3%) GO:0043093 (14.3%) GO:0051258 (14.3%)" "GO:0005737 (14.3%) GO:0032153 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%)" "division septum assembly (14.3%) FtsZ-dependent cytokinesis (14.3%) protein polymerization (14.3%)" "cytoplasm (14.3%) cell division site (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" AYNTVQPASGK root "3.6.4.- (99.9%) 3.6.3.14 (0.1%)" "Acting on ATP; involved in cellular and subcellular movement (99.9%) Transferred entry: 7.1.2.2 (0.1%)" "GO:0006353 (14.3%) GO:0006508 (0%)" "GO:0005829 (13.9%) GO:0043657 (0%)" "GO:0003723 (14.3%) GO:0005524 (14.3%) GO:0008186 (14.3%)" "DNA-templated transcription termination (14.3%) proteolysis (0%)" "cytosol (13.9%) host cell (0%)" "RNA binding (14.3%) ATP binding (14.3%) ATP-dependent activity, acting on RNA (14.3%)" "IPR000194 (10.4%) IPR004665 (10.4%) IPR003593 (10.4%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.4%) Transcription termination factor Rho (10.4%) AAA+ ATPase domain (10.4%)" ELFKEETKPELTGYEKGQVTELGAVNVMTGIYTGR ESTTDKIDDALDELGDEFTEEEVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.6.2.4 (88.9%) 3.6.1.- (7.4%) 3.6.4.12 (3.7%)" "DNA 3'-5' helicase (88.9%) In phosphorus-containing anhydrides (7.4%) DNA helicase (3.7%)" "GO:0006260 (8.3%) GO:0006281 (8.3%) GO:0006310 (8.3%)" "GO:0005737 (8.3%) GO:0030894 (8.3%) GO:0043590 (8.3%)" "GO:0003677 (8.3%) GO:0005524 (8.3%) GO:0009378 (8.3%)" "DNA replication (8.3%) DNA repair (8.3%) DNA recombination (8.3%)" "cytoplasm (8.3%) replisome (8.3%) bacterial nucleoid (8.3%)" "DNA binding (8.3%) ATP binding (8.3%) four-way junction helicase activity (8.3%)" "IPR001650 (7.1%) IPR002121 (7.1%) IPR004589 (7.1%)" "Helicase, C-terminal domain-like (7.1%) HRDC domain (7.1%) DNA helicase, ATP-dependent, RecQ type (7.1%)" MLYTSPQDSSVTTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0003677 (100%) DNA binding (100%) "IPR001387 (50%) IPR010982 (50%)" "Cro/C1-type, helix-turn-helix domain (50%) Lambda repressor-like, DNA-binding domain superfamily (50%)" TCINDAQEKMDMAVMYLEEALAHIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006415 (31.1%) GO:0006412 (2.2%)" GO:0005737 (33.3%) GO:0043023 (33.3%) "translational termination (31.1%) translation (2.2%)" cytoplasm (33.3%) ribosomal large subunit binding (33.3%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" IVEDAHKEAESIIASSR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0033178 (50%) GO:0046961 (50%) proton-transporting two-sector ATPase complex, catalytic domain (50%) proton-transporting ATPase activity, rotational mechanism (50%) IPR002842 (100%) V-type ATPase subunit E (100%) VKVLSVADMFAEAIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" EGQKFQQAGNIEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" ENTIMENPEIKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" ADDALNHILETYGHLIAEER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0008199 (44.1%) GO:0016722 (44.1%) GO:0003677 (11.8%)" "ferric iron binding (44.1%) oxidoreductase activity, acting on metal ions (44.1%) DNA binding (11.8%)" "IPR002177 (20%) IPR008331 (20%) IPR009078 (20%)" "DNA-binding protein Dps (20%) Ferritin/DPS domain (20%) Ferritin-like superfamily (20%)" LNLHEIYGDFQGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.14 (100%) L-rhamnose isomerase (100%) "GO:0019301 (20%) GO:0019324 (20%)" GO:0005737 (20%) "GO:0008740 (20%) GO:0030145 (20%)" "rhamnose catabolic process (20%) L-lyxose metabolic process (20%)" cytoplasm (20%) "L-rhamnose isomerase activity (20%) manganese ion binding (20%)" "IPR009308 (33.3%) IPR036237 (33.3%) IPR050337 (33.3%)" "Rhamnose isomerase (33.3%) Xylose isomerase-like superfamily (33.3%) L-rhamnose isomerase (33.3%)" NVGVPLAHIEIAFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (22.4%) GO:0044208 (22.4%) GO:0006188 (8.6%)" "GO:0004018 (31%) GO:0070626 (15.5%)" "'de novo' IMP biosynthetic process (22.4%) 'de novo' AMP biosynthetic process (22.4%) IMP biosynthetic process (8.6%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (31%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (15.5%)" "IPR000362 (12.5%) IPR004769 (12.5%) IPR008948 (12.5%)" "Fumarate lyase family (12.5%) Adenylosuccinate lyase (12.5%) L-Aspartase-like (12.5%)" AEKINALETVTIASK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006412 (19.9%) GO:0002181 (0%)" "GO:0005840 (20.2%) GO:1990904 (19.8%) GO:0022625 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.9%) GO:0070180 (0%)" "translation (19.9%) cytoplasmic translation (0%)" "ribosome (20.2%) ribonucleoprotein complex (19.8%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%) large ribosomal subunit rRNA binding (0%)" "IPR020594 (14.4%) IPR000244 (14.3%) IPR020069 (14.3%)" "Large ribosomal subunit protein bL9, bacteria/chloroplast (14.4%) Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9, C-terminal (14.3%)" TELSSESPCKEAIDMTTAGHLLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" LTGDVKFDEVSPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.5.4.9 (52.2%) 1.5.1.5 (47.8%)" "methenyltetrahydrofolate cyclohydrolase (52.2%) methylenetetrahydrofolate dehydrogenase (NADP(+)) (47.8%)" "GO:0035999 (14.6%) GO:0000105 (13.9%) GO:0006164 (13.9%)" GO:0005829 (14.6%) "GO:0004477 (14.6%) GO:0004488 (14.6%)" "tetrahydrofolate interconversion (14.6%) L-histidine biosynthetic process (13.9%) purine nucleotide biosynthetic process (13.9%)" cytosol (14.6%) "methenyltetrahydrofolate cyclohydrolase activity (14.6%) methylenetetrahydrofolate dehydrogenase (NADP+) activity (14.6%)" "IPR000672 (17.1%) IPR020631 (17.1%) IPR020867 (17.1%)" "Tetrahydrofolate dehydrogenase/cyclohydrolase (17.1%) Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (17.1%) Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (17.1%)" AFAANRDEWALTTSYVYPGPIQYFGPTEVCDQPTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" SLIGPDGEQYKLPR root "GO:0006355 (20.1%) GO:0000160 (0.4%) GO:0045892 (0%)" "GO:0005829 (19.7%) GO:0032993 (19.7%) GO:0005737 (0%)" "GO:0000156 (19.7%) GO:0000976 (19.7%) GO:0003677 (0.4%)" "regulation of DNA-templated transcription (20.1%) phosphorelay signal transduction system (0.4%) negative regulation of DNA-templated transcription (0%)" "cytosol (19.7%) protein-DNA complex (19.7%) cytoplasm (0%)" "phosphorelay response regulator activity (19.7%) transcription cis-regulatory region binding (19.7%) DNA binding (0.4%)" "IPR001867 (16.8%) IPR016032 (16.7%) IPR036388 (16.7%)" "OmpR/PhoB-type DNA-binding domain (16.8%) Signal transduction response regulator, C-terminal effector (16.7%) Winged helix-like DNA-binding domain superfamily (16.7%)" MQALVDAGADAIVIDTAHGHSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20.4%) GO:0006183 (20.4%)" "GO:0003938 (20.4%) GO:0046872 (20.4%) GO:0000166 (18.6%)" "GMP biosynthetic process (20.4%) GTP biosynthetic process (20.4%)" "IMP dehydrogenase activity (20.4%) metal ion binding (20.4%) nucleotide binding (18.6%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" AAKYDKVEQYEDKDMIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.4%) GO:0043335 (16.4%) GO:0051083 (16.4%)" "GO:0003755 (16.4%) GO:0043022 (16.4%) GO:0044183 (16.4%)" "protein transport (16.4%) protein unfolding (16.4%) 'de novo' cotranslational protein folding (16.4%)" "peptidyl-prolyl cis-trans isomerase activity (16.4%) ribosome binding (16.4%) protein folding chaperone (16.4%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" AQGIDVINLSVGEPDFNTPDFIKEAAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" SLSDTLEEVLSSSGEK root "GO:0005886 (49%) GO:0060187 (0.6%)" "GO:0043022 (49.7%) GO:0043024 (0.6%)" "plasma membrane (49%) cell pole (0.6%)" "ribosome binding (49.7%) ribosomal small subunit binding (0.6%)" "IPR043604 (33.6%) IPR010279 (33.2%) IPR043605 (32.4%)" "DUF883, N-terminal domain (33.6%) Inner membrane protein YqjD/ElaB (33.2%) DUF883, C-terminal domain (32.4%)" YTGYKDMPR Pseudomonadati Bacteria Pseudomonadati GO:0006412 (17%) "GO:0005840 (17%) GO:1990904 (16.9%) GO:0005737 (16.6%)" "GO:0003735 (17%) GO:0019843 (15.3%)" translation (17%) "ribosome (17%) ribonucleoprotein complex (16.9%) cytoplasm (16.6%)" "structural constituent of ribosome (17%) rRNA binding (15.3%)" "IPR000630 (36%) IPR035987 (36%) IPR047863 (28%)" "Small ribosomal subunit protein uS8 (36%) Small ribosomal subunit protein uS8 superfamily (36%) Small ribosomal subunit protein uS8, conserved site (28%)" QLESSYNERDKQKNEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.24.55 (100%) pitrilysin (100%) GO:0006508 (33.3%) "GO:0004222 (33.3%) GO:0046872 (33.3%)" proteolysis (33.3%) "metalloendopeptidase activity (33.3%) metal ion binding (33.3%)" "IPR001431 (20%) IPR007863 (20%) IPR011249 (20%)" "Peptidase M16, zinc-binding site (20%) Peptidase M16, C-terminal (20%) Metalloenzyme, LuxS/M16 peptidase-like (20%)" NVGNAMGDEVKEYGCDVLLAPALNIHR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.21 (100%) beta-glucosidase (100%) GO:0005975 (50%) GO:0008422 (50%) carbohydrate metabolic process (50%) beta-glucosidase activity (50%) "IPR001764 (11.1%) IPR002772 (11.1%) IPR013783 (11.1%)" "Glycoside hydrolase, family 3, N-terminal (11.1%) Glycoside hydrolase family 3 C-terminal domain (11.1%) Immunoglobulin-like fold (11.1%)" DTYADAAQWDEKAKDLAGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.5%) GO:0005829 (17.5%) "GO:0004612 (17.5%) GO:0005524 (17.5%) GO:0046872 (16.4%)" gluconeogenesis (17.5%) cytosol (17.5%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.5%) ATP binding (17.5%) metal ion binding (16.4%)" "IPR001272 (25.8%) IPR013035 (25.8%) IPR008210 (24.2%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.8%) Phosphoenolpyruvate carboxykinase, C-terminal (25.8%) Phosphoenolpyruvate carboxykinase, N-terminal (24.2%)" VVSTADIENAAEVIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR049273 (50%) IPR053996 (50%)" "DUF3829-like, N-terminal domain (50%) DUF3829-like, C-terminal domain (50%)" LIGDDEHGWDNEGVFNYEGGCYAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.2%) GO:0005829 (17.2%) "GO:0004612 (17.2%) GO:0005524 (17.2%) GO:0046872 (17.2%)" gluconeogenesis (17.2%) cytosol (17.2%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.2%) ATP binding (17.2%) metal ion binding (17.2%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" AADVETLGELVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.7%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.7%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011260 (16.7%) IPR011262 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.7%) DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" IVAALLENHQTPEGIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (24.6%) GO:0005737 (24.6%) "GO:0004828 (24.6%) GO:0005524 (24.6%) GO:0016874 (1.6%)" seryl-tRNA aminoacylation (24.6%) cytoplasm (24.6%) "serine-tRNA ligase activity (24.6%) ATP binding (24.6%) ligase activity (1.6%)" "IPR002314 (14.2%) IPR002317 (14.2%) IPR006195 (14.2%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (14.2%) Serine-tRNA ligase, type1 (14.2%) Aminoacyl-tRNA synthetase, class II (14.2%)" AIAPTFGGINLEDIKAPECFEIERR root "1.1.1.40 (98.1%) 1.1.1.38 (1.9%)" "malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (98.1%) malate dehydrogenase (oxaloacetate-decarboxylating) (1.9%)" GO:0006108 (16.3%) "GO:0051287 (17.9%) GO:0046872 (17.8%) GO:0016746 (16.5%)" malate metabolic process (16.3%) "NAD binding (17.9%) metal ion binding (17.8%) acyltransferase activity (16.5%)" "IPR012301 (9.2%) IPR037062 (9.2%) IPR046346 (9.2%)" "Malic enzyme, N-terminal domain (9.2%) Malic enzyme, N-terminal domain superfamily (9.2%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (9.2%)" TIALDKNDEICGYEFVHMGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae ASTKEENLIVLYPER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) AYEIGILGYYVELEGDKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR013022 (33.3%) IPR036237 (33.3%) IPR050312 (33.3%)" "Xylose isomerase-like, TIM barrel domain (33.3%) Xylose isomerase-like superfamily (33.3%) IolE/XylA/MocC-like (33.3%)" KAEQAAAEQALK root "3.1.26.3 (99.9%) 3.4.21.- (0.1%)" "ribonuclease III (99.9%) Serine endopeptidases (0.1%)" "GO:0006364 (10.1%) GO:0006397 (10.1%) GO:0008033 (10.1%)" "GO:0005737 (10%) GO:0016442 (0.1%) GO:0070578 (0.1%)" "GO:0004525 (10.1%) GO:0003725 (10.1%) GO:0046872 (10.1%)" "rRNA processing (10.1%) mRNA processing (10.1%) tRNA processing (10.1%)" "cytoplasm (10%) RISC complex (0.1%) RISC-loading complex (0.1%)" "ribonuclease III activity (10.1%) double-stranded RNA binding (10.1%) metal ion binding (10.1%)" "IPR014720 (25.3%) IPR000999 (24.8%) IPR036389 (24.8%)" "Double-stranded RNA-binding domain (25.3%) Ribonuclease III domain (24.8%) Ribonuclease III, endonuclease domain superfamily (24.8%)" QLEEAGAEVELK Bacteria Bacteria GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" AVVALREPSLGPCFGMK Bacteria Bacteria 6.3.4.3 (100%) formate--tetrahydrofolate ligase (100%) "GO:0035999 (32.9%) GO:0006730 (0.5%)" "GO:0004329 (33.3%) GO:0005524 (33.3%)" "tetrahydrofolate interconversion (32.9%) one-carbon metabolic process (0.5%)" "formate-tetrahydrofolate ligase activity (33.3%) ATP binding (33.3%)" "IPR000559 (33.6%) IPR020628 (33.6%) IPR027417 (32.7%)" "Formate-tetrahydrofolate ligase, FTHFS (33.6%) Formate-tetrahydrofolate ligase, FTHFS, conserved site (33.6%) P-loop containing nucleoside triphosphate hydrolase (32.7%)" VDGLSYEILENALAQAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8.3%) IPR003029 (8.3%) IPR004087 (8.3%)" "Exoribonuclease, phosphorolytic domain 1 (8.3%) S1 domain (8.3%) K Homology domain (8.3%)" ELDAVIVANNIAR Pseudomonadati Bacteria Pseudomonadati GO:0006412 (20.3%) "GO:0022627 (20.3%) GO:0005840 (0.1%)" "GO:0003735 (20.3%) GO:0019843 (20.1%) GO:0003729 (18.5%)" translation (20.3%) "cytosolic small ribosomal subunit (20.3%) ribosome (0.1%)" "structural constituent of ribosome (20.3%) rRNA binding (20.1%) mRNA binding (18.5%)" "IPR009019 (11.3%) IPR001351 (11.2%) IPR004044 (11.2%)" "K homology domain superfamily, prokaryotic type (11.3%) Small ribosomal subunit protein uS3, C-terminal (11.2%) K Homology domain, type 2 (11.2%)" KMESISPFELK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "4.1.1.12 (87%) 2.6.1.1 (8.7%) 2.6.1.- (4.3%)" "aspartate 4-decarboxylase (87%) aspartate transaminase (8.7%) Transaminases (4.3%)" GO:0006520 (26.6%) "GO:0030170 (26.6%) GO:0008483 (23.9%) GO:0047688 (15.2%)" amino acid metabolic process (26.6%) "pyridoxal phosphate binding (26.6%) transaminase activity (23.9%) aspartate 4-decarboxylase activity (15.2%)" "IPR004839 (16.6%) IPR015421 (16.6%) IPR015422 (16.6%)" "Aminotransferase, class I/classII, large domain (16.6%) Pyridoxal phosphate-dependent transferase, major domain (16.6%) Pyridoxal phosphate-dependent transferase, small domain (16.6%)" GFIDVFDEEAHKLKDIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33%) "GO:0003921 (33%) GO:0005524 (33%) GO:0008483 (0.9%)" cytosol (33%) "GMP synthase activity (33%) ATP binding (33%) transaminase activity (0.9%)" "IPR001674 (12.7%) IPR014729 (12.7%) IPR025777 (12.7%)" "GMP synthase, C-terminal (12.7%) Rossmann-like alpha/beta/alpha sandwich fold (12.7%) GMP synthetase ATP pyrophosphatase domain (12.7%)" NVGVPFGHIVIAIQSSLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (27.4%) GO:0044208 (27.4%) GO:0006188 (2.2%)" "GO:0004018 (29.6%) GO:0070626 (13%)" "'de novo' IMP biosynthetic process (27.4%) 'de novo' AMP biosynthetic process (27.4%) IMP biosynthetic process (2.2%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (29.6%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (13%)" "IPR000362 (12.5%) IPR004769 (12.5%) IPR008948 (12.5%)" "Fumarate lyase family (12.5%) Adenylosuccinate lyase (12.5%) L-Aspartase-like (12.5%)" KIGMTSVFSADGK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (25.1%) IPR009000 (25.1%) IPR019927 (25.1%)" "Large ribosomal subunit protein uL3 (25.1%) Translation protein, beta-barrel domain superfamily (25.1%) Large ribosomal subunit protein uL3, bacteria/organella (25.1%)" STIYHIDFSFDKLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.6%) GO:0006164 (0.7%)" GO:0005737 (20.3%) "GO:0004642 (20.3%) GO:0005524 (19.6%) GO:0046872 (19.6%)" "'de novo' IMP biosynthetic process (19.6%) purine nucleotide biosynthetic process (0.7%)" cytoplasm (20.3%) "phosphoribosylformylglycinamidine synthase activity (20.3%) ATP binding (19.6%) metal ion binding (19.6%)" "IPR010918 (11.3%) IPR036676 (11.3%) IPR036921 (11.3%)" "PurM-like, C-terminal domain (11.3%) PurM-like, C-terminal domain superfamily (11.3%) PurM-like, N-terminal domain superfamily (11.3%)" IKEVHVFEGLGR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0000027 (9.8%) GO:0009409 (9.8%) GO:0010467 (8.7%)" "GO:0005829 (10.2%) GO:1990904 (10.2%)" "GO:0003924 (10.2%) GO:0005525 (10.2%) GO:0000049 (9.8%)" "ribosomal large subunit assembly (9.8%) response to cold (9.8%) gene expression (8.7%)" "cytosol (10.2%) ribonucleoprotein complex (10.2%)" "GTPase activity (10.2%) GTP binding (10.2%) tRNA binding (9.8%)" "IPR000795 (6.8%) IPR004161 (6.8%) IPR005225 (6.8%)" "Translational (tr)-type GTP-binding domain (6.8%) Translation elongation factor EFTu-like, domain 2 (6.8%) Small GTP-binding domain (6.8%)" ATAYHNLSDYDFNSVPNAEEMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.5.1.78 (94.7%) 6.3.3.- (5.3%)" "6,7-dimethyl-8-ribityllumazine synthase (94.7%) Cyclo-ligases (5.3%)" GO:0009231 (22.7%) "GO:0005829 (22.7%) GO:0009349 (22.7%)" "GO:0000906 (22.7%) GO:0016874 (9.3%)" riboflavin biosynthetic process (22.7%) "cytosol (22.7%) riboflavin synthase complex (22.7%)" "6,7-dimethyl-8-ribityllumazine synthase activity (22.7%) ligase activity (9.3%)" "IPR002180 (33.3%) IPR034964 (33.3%) IPR036467 (33.3%)" "Lumazine/riboflavin synthase (33.3%) Lumazine synthase (33.3%) Lumazine/riboflavin synthase superfamily (33.3%)" MAERPEVQDALSAEGLK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.5.1.18 (100%) glutathione transferase (100%) GO:0042542 (0.6%) GO:0005737 (36%) "GO:0004364 (32%) GO:0016740 (30.2%) GO:0016853 (0.6%)" response to hydrogen peroxide (0.6%) cytoplasm (36%) "glutathione transferase activity (32%) transferase activity (30.2%) isomerase activity (0.6%)" "IPR036282 (18.3%) IPR004046 (18.1%) IPR010987 (18.1%)" "Glutathione S-transferase, C-terminal domain superfamily (18.3%) Glutathione S-transferase, C-terminal (18.1%) Glutathione S-transferase, C-terminal-like (18.1%)" GFDATQYIDRK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" GSCCCGGGHCGEATIPALDFSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" VNTTEADAPDYVLQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.162 (100%) N-acetylhexosamine 1-kinase (100%) "GO:0016740 (88.9%) GO:0016301 (11.1%)" "transferase activity (88.9%) kinase activity (11.1%)" "IPR002575 (33.3%) IPR011009 (33.3%) IPR050249 (33.3%)" "Aminoglycoside phosphotransferase (33.3%) Protein kinase-like domain superfamily (33.3%) Pseudomonas-type Homoserine Kinase (33.3%)" ALNHKAELGGGEDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (24%) GO:0009317 (24%) "GO:0003989 (24%) GO:0004658 (24%) GO:0016740 (4%)" carbon fixation (24%) acetyl-CoA carboxylase complex (24%) "acetyl-CoA carboxylase activity (24%) propionyl-CoA carboxylase activity (24%) transferase activity (4%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" ILYDRTEEEDFVSFEPALKEYR VQLSAGHETEHLDKAIAAFIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (14.3%) GO:0030148 (14.3%)" "GO:0005829 (14.3%) GO:0016020 (14.3%)" "GO:0008890 (14.3%) GO:0030170 (14.3%) GO:0016874 (9.1%)" "L-threonine catabolic process to glycine (14.3%) sphingolipid biosynthetic process (14.3%)" "cytosol (14.3%) membrane (14.3%)" "glycine C-acetyltransferase activity (14.3%) pyridoxal phosphate binding (14.3%) ligase activity (9.1%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" KGNVMYEMNVQGVAVSAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR025347 (100%) Protein of unknown function DUF4251 (100%) LVVYNTQTSPLKEYYKGEGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.7.4.3 (94.7%) 2.7.4.- (5.3%)" "adenylate kinase (94.7%) Phosphotransferases with a phosphate group as acceptor (5.3%)" GO:0044209 (21.5%) GO:0005737 (26.2%) "GO:0004017 (26.2%) GO:0005524 (26.2%)" AMP salvage (21.5%) cytoplasm (26.2%) "AMP kinase activity (26.2%) ATP binding (26.2%)" "IPR000850 (33.3%) IPR027417 (33.3%) IPR033690 (33.3%)" "Adenylate kinase/UMP-CMP kinase (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%) Adenylate kinase, conserved site (33.3%)" VAVESYDDRIDPVGACVGMK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006353 (19.1%) GO:0031564 (19.1%)" GO:0005829 (19.1%) "GO:0003700 (19.1%) GO:0003723 (19.1%) GO:0000166 (3.5%)" "DNA-templated transcription termination (19.1%) transcription antitermination (19.1%)" cytosol (19.1%) "DNA-binding transcription factor activity (19.1%) RNA binding (19.1%) nucleotide binding (3.5%)" "IPR010213 (10.9%) IPR013735 (10.9%) IPR025249 (10.9%)" "Transcription factor NusA (10.9%) Transcription factor NusA, N-terminal (10.9%) Transcription factor NusA, first KH domain (10.9%)" QIVGFLKEGCEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (43.1%) GO:0016616 (39.2%) GO:0016787 (13.7%)" "NAD binding (43.1%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (39.2%) hydrolase activity (13.7%)" "IPR006139 (33.3%) IPR006140 (33.3%) IPR036291 (33.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" AIEELNQASYDGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003723 (100%) RNA binding (100%) "IPR000504 (20%) IPR012677 (20%) IPR035979 (20%)" "RNA recognition motif domain (20%) Nucleotide-binding alpha-beta plait domain superfamily (20%) RNA-binding domain superfamily (20%)" EIAETGKPILFVGTK Peptostreptococcales Bacteria Bacillati Bacillota Clostridia Peptostreptococcales GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" IVNSGDPAEAFEAAQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.3%) "GO:0005737 (20.3%) GO:0015935 (20.3%)" "GO:0003735 (20.3%) GO:0019843 (18.9%)" translation (20.3%) "cytoplasm (20.3%) small ribosomal subunit (20.3%)" "structural constituent of ribosome (20.3%) rRNA binding (18.9%)" "IPR001209 (34.1%) IPR018271 (34.1%) IPR023036 (31.8%)" "Small ribosomal subunit protein uS14 (34.1%) Small ribosomal subunit protein uS14, conserved site (34.1%) Small ribosomal subunit protein uS14, bacteria/plastid (31.8%)" MNIIEANVATPDAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.5.1.78 (98.3%) 2.5.1.9 (1.7%)" "6,7-dimethyl-8-ribityllumazine synthase (98.3%) riboflavin synthase (1.7%)" GO:0009231 (24.4%) "GO:0009349 (24.4%) GO:0005829 (23.9%) GO:0005737 (0.2%)" "GO:0000906 (23.9%) GO:0016874 (2.3%) GO:0004746 (0.5%)" riboflavin biosynthetic process (24.4%) "riboflavin synthase complex (24.4%) cytosol (23.9%) cytoplasm (0.2%)" "6,7-dimethyl-8-ribityllumazine synthase activity (23.9%) ligase activity (2.3%) riboflavin synthase activity (0.5%)" "IPR036467 (33.7%) IPR002180 (33.3%) IPR034964 (33.1%)" "Lumazine/riboflavin synthase superfamily (33.7%) Lumazine/riboflavin synthase (33.3%) Lumazine synthase (33.1%)" ILELQKDSLYAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006353 (18.8%) GO:0031564 (18.8%)" GO:0005829 (18.8%) "GO:0003700 (18.8%) GO:0003723 (18.8%) GO:0000166 (5%)" "DNA-templated transcription termination (18.8%) transcription antitermination (18.8%)" cytosol (18.8%) "DNA-binding transcription factor activity (18.8%) RNA binding (18.8%) nucleotide binding (5%)" "IPR009019 (11.6%) IPR010213 (11.6%) IPR012340 (11.6%)" "K homology domain superfamily, prokaryotic type (11.6%) Transcription factor NusA (11.6%) Nucleic acid-binding, OB-fold (11.6%)" VNDREVVDGTVIAMNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.8%) "GO:0022627 (24.4%) GO:0005840 (0.9%) GO:1990904 (0.4%)" "GO:0003729 (24.8%) GO:0003735 (24.8%)" translation (24.8%) "cytosolic small ribosomal subunit (24.4%) ribosome (0.9%) ribonucleoprotein complex (0.4%)" "mRNA binding (24.8%) structural constituent of ribosome (24.8%)" "IPR003029 (24.9%) IPR012340 (24.9%) IPR035104 (24.9%)" "S1 domain (24.9%) Nucleic acid-binding, OB-fold (24.9%) Ribosomal protein S1-like (24.9%)" TIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "3.5.4.- (68.4%) 3.5.99.10 (26.3%) 2.5.1.7 (5.3%)" "In cyclic amidines (68.4%) 2-iminobutanoate/2-iminopropanoate deaminase (26.3%) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (5.3%)" "GO:0009097 (1.5%) GO:0009636 (1.5%) GO:0070207 (0.5%)" "GO:0005829 (46%) GO:0016020 (0.5%) GO:0032991 (0.5%)" "GO:0019239 (44.4%) GO:0120242 (1.5%) GO:0120243 (1.5%)" "isoleucine biosynthetic process (1.5%) response to toxic substance (1.5%) protein homotrimerization (0.5%)" "cytosol (46%) membrane (0.5%) protein-containing complex (0.5%)" "deaminase activity (44.4%) 2-iminobutanoate deaminase activity (1.5%) 2-iminopropanoate deaminase activity (1.5%)" "IPR006175 (26%) IPR035959 (26%) IPR006056 (24.7%)" "YjgF/YER057c/UK114 family (26%) RutC-like superfamily (26%) RidA family (24.7%)" GRQDVVDCEVK Bacteria Bacteria "IPR003718 (33.3%) IPR015946 (33.3%) IPR036102 (33.3%)" "OsmC/Ohr family (33.3%) K homology domain-like, alpha/beta (33.3%) OsmC/Ohr superfamily (33.3%)" SELMMEEMNEVHDFMSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0000917 (14.5%) GO:0043093 (13.6%) GO:0051258 (13.6%)" "GO:0005737 (14.5%) GO:0032153 (14.5%)" "GO:0003924 (14.5%) GO:0005525 (14.5%)" "division septum assembly (14.5%) FtsZ-dependent cytokinesis (13.6%) protein polymerization (13.6%)" "cytoplasm (14.5%) cell division site (14.5%)" "GTPase activity (14.5%) GTP binding (14.5%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" LDEFETVGNTIR root 3.4.24.- (100%) Metalloendopeptidases (100%) "GO:0000917 (13.9%) GO:0043093 (13.8%) GO:0051258 (13.8%)" "GO:0005737 (14.4%) GO:0032153 (14.4%) GO:0005886 (0%)" "GO:0005525 (14.4%) GO:0003924 (14.4%) GO:0016787 (0%)" "division septum assembly (13.9%) FtsZ-dependent cytokinesis (13.8%) protein polymerization (13.8%)" "cytoplasm (14.4%) cell division site (14.4%) plasma membrane (0%)" "GTP binding (14.4%) GTPase activity (14.4%) hydrolase activity (0%)" "IPR024757 (11.2%) IPR018316 (11.2%) IPR045061 (11.2%)" "Cell division protein FtsZ, C-terminal (11.2%) Tubulin/FtsZ, 2-layer sandwich domain (11.2%) Tubulin-like protein FtsZ/CetZ (11.2%)" EAGEIAGLTVR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0005737 (17.1%) GO:0070013 (1.2%)" "GO:0005524 (30%) GO:0140662 (30%) GO:0051082 (21.8%)" "cytoplasm (17.1%) intracellular organelle lumen (1.2%)" "ATP binding (30%) ATP-dependent protein folding chaperone (30%) unfolded protein binding (21.8%)" "IPR013126 (19.2%) IPR018181 (19.2%) IPR043129 (19.2%)" "Heat shock protein 70 family (19.2%) Heat shock protein 70, conserved site (19.2%) ATPase, nucleotide binding domain (19.2%)" ALINPEFLERSEEEIAMEEGCLSLPGIHEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.1.88 (100%) peptide deformylase (100%) "GO:0006412 (25%) GO:0043686 (25%)" "GO:0042586 (25%) GO:0046872 (25%)" "translation (25%) obsolete co-translational protein modification (25%)" "peptide deformylase activity (25%) metal ion binding (25%)" "IPR023635 (50%) IPR036821 (50%)" "Peptide deformylase (50%) Peptide deformylase superfamily (50%)" VGLVSVHLYRPF Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "1.2.7.1 (76.5%) 1.2.7.- (17.6%) 1.2.1.51 (5.9%)" "pyruvate synthase (76.5%) With an iron-sulfur protein as acceptor (17.6%) pyruvate dehydrogenase (NADP(+)) (5.9%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (11.9%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.2%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (11.9%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.2%)" "IPR002869 (7.7%) IPR009014 (7.7%) IPR011895 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%) Pyruvate-flavodoxin oxidoreductase (7.7%)" FQQTMVLPDNVEKDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" FMGENWDQVQKEIAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005524 (33.3%) GO:0051082 (33.3%) GO:0140662 (33.3%)" "ATP binding (33.3%) unfolded protein binding (33.3%) ATP-dependent protein folding chaperone (33.3%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" TCLVSGSGNVAQYTVEK Pseudomonadati Bacteria Pseudomonadati "1.4.1.- (50%) 1.4.1.4 (50%)" "With NAD(+) or NADP(+) as acceptor (50%) glutamate dehydrogenase (NADP(+)) (50%)" GO:0006537 (25.6%) GO:0005829 (25.6%) "GO:0004354 (25.6%) GO:0000166 (23.2%)" glutamate biosynthetic process (25.6%) cytosol (25.6%) "glutamate dehydrogenase (NADP+) activity (25.6%) nucleotide binding (23.2%)" "IPR006096 (11.3%) IPR036291 (11.3%) IPR050724 (11.3%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.3%) NAD(P)-binding domain superfamily (11.3%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.3%)" CHYEGTLIDGTLFDSSIKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (49.8%) "GO:0003755 (49.8%) GO:0016853 (0.5%)" protein folding (49.8%) "peptidyl-prolyl cis-trans isomerase activity (49.8%) isomerase activity (0.5%)" "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" EIEFQSLEIELCEKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" THAPVDFDTAVASTITSHDAGYINK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (27.9%) GO:0044814 (0.3%)" "GO:0005829 (33.2%) GO:0016020 (0.3%)" "GO:0008861 (33.2%) GO:0016829 (4.2%) GO:0016746 (0.8%)" "glucose metabolic process (27.9%) pyruvate fermentation via PFL (0.3%)" "cytosol (33.2%) membrane (0.3%)" "formate C-acetyltransferase activity (33.2%) lyase activity (4.2%) acyltransferase activity (0.8%)" "IPR004184 (22.3%) IPR050244 (22.3%) IPR005949 (18.8%)" "Pyruvate formate lyase domain (22.3%) Autonomous Glycyl Radical Cofactor (22.3%) Formate acetyltransferase (18.8%)" IVFSLPVYGYSK Parabacteroides merdae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides merdae "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" SHALNEYISLIEQTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.3.1.1 (75%) 1.3.98.1 (25%)" "dihydrouracil dehydrogenase (NAD(+)) (75%) dihydroorotate oxidase (fumarate) (25%)" "GO:0006207 (24%) GO:0044205 (21.9%) GO:0006222 (2.1%)" GO:0005737 (24%) "GO:0004152 (20.8%) GO:0004159 (4.2%) GO:1990663 (3.1%)" "'de novo' pyrimidine nucleobase biosynthetic process (24%) 'de novo' UMP biosynthetic process (21.9%) UMP biosynthetic process (2.1%)" cytoplasm (24%) "dihydroorotate dehydrogenase activity (20.8%) dihydropyrimidine dehydrogenase (NAD+) activity (4.2%) dihydroorotate dehydrogenase (fumarate) activity (3.1%)" "IPR005720 (25%) IPR012135 (25%) IPR013785 (25%)" "Dihydroorotate dehydrogenase, catalytic (25%) Dihydroorotate dehydrogenase, class 1/ 2 (25%) Aldolase-type TIM barrel (25%)" MFIRPTAEELEAYGEPDFVCFNASK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17%) GO:0005829 (17%) "GO:0004612 (17%) GO:0005524 (17%) GO:0046872 (17%)" gluconeogenesis (17%) cytosol (17%) "phosphoenolpyruvate carboxykinase (ATP) activity (17%) ATP binding (17%) metal ion binding (17%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" FAPSPTGYLHVGGAR root "6.1.1.17 (99.9%) 6.1.1.- (0%) 6.1.1.24 (0%)" "glutamate--tRNA ligase (99.9%) Ligases forming aminoacyl-tRNA and related compounds (0%) glutamate--tRNA(Gln) ligase (0%)" "GO:0006424 (16.7%) GO:0009791 (0.1%) GO:0048608 (0.1%)" "GO:0005829 (16.5%) GO:0005737 (0.1%) GO:0005739 (0.1%)" "GO:0004818 (16.7%) GO:0005524 (16.7%) GO:0008270 (16.4%)" "glutamyl-tRNA aminoacylation (16.7%) post-embryonic development (0.1%) reproductive structure development (0.1%)" "cytosol (16.5%) cytoplasm (0.1%) mitochondrion (0.1%)" "glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%) zinc ion binding (16.4%)" "IPR001412 (10.1%) IPR020058 (10.1%) IPR049940 (10.1%)" "Aminoacyl-tRNA synthetase, class I, conserved site (10.1%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (10.1%) Glutamyl-Q tRNA(Asp) synthetase/Glutamate--tRNA ligase (10.1%)" IQFAQYGMLNIPEEVLENYAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.5%) GO:0043335 (16.5%) GO:0051083 (16.5%)" "GO:0003755 (16.5%) GO:0043022 (16.5%) GO:0044183 (16.5%)" "protein transport (16.5%) protein unfolding (16.5%) 'de novo' cotranslational protein folding (16.5%)" "peptidyl-prolyl cis-trans isomerase activity (16.5%) ribosome binding (16.5%) protein folding chaperone (16.5%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" WLALFPLSTEGWAEQRR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" VRESDLQQVLEEYGVVDSVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0003723 (75%) GO:0003729 (25%)" "RNA binding (75%) mRNA binding (25%)" "IPR000504 (25%) IPR012677 (25%) IPR035979 (25%)" "RNA recognition motif domain (25%) Nucleotide-binding alpha-beta plait domain superfamily (25%) RNA-binding domain superfamily (25%)" RVILTPDNAQR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR021857 (100%) Protein of unknown function DUF3467 (100%) KMATIDKLTNDGTYSNLSKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.2%) "GO:0022627 (32.8%) GO:0005840 (0.8%)" GO:0003735 (33.2%) translation (33.2%) "cytosolic small ribosomal subunit (32.8%) ribosome (0.8%)" structural constituent of ribosome (33.2%) "IPR001865 (25.2%) IPR023591 (25.2%) IPR005706 (24.9%)" "Small ribosomal subunit protein uS2 (25.2%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.2%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (24.9%)" RVTITIAADSIETAVKSELVNVAK Bacteria Bacteria 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.5%) GO:0043335 (12.4%) GO:0051083 (12.4%)" "GO:0005737 (12.1%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003755 (12.4%) GO:0043022 (12.4%) GO:0044183 (12.4%)" "protein transport (12.5%) protein unfolding (12.4%) 'de novo' cotranslational protein folding (12.4%)" "cytoplasm (12.1%) cytosol (0%) membrane (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.4%) ribosome binding (12.4%) protein folding chaperone (12.4%)" "IPR008881 (12.7%) IPR036611 (12.7%) IPR005215 (12.6%)" "Trigger factor, ribosome-binding, bacterial (12.7%) Trigger factor ribosome-binding domain superfamily (12.7%) Trigger factor (12.6%)" VGSRFPLLGELQSILK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.2.1.32 (100%) L(+)-tartrate dehydratase (100%) "GO:0006099 (0.2%) GO:0044010 (0.2%) GO:1901275 (0.2%)" "GO:0005829 (0.2%) GO:1902494 (0.2%)" "GO:0046872 (32.7%) GO:0051539 (32.7%) GO:0016829 (18.9%)" "tricarboxylic acid cycle (0.2%) single-species biofilm formation (0.2%) tartrate metabolic process (0.2%)" "cytosol (0.2%) catalytic complex (0.2%)" "metal ion binding (32.7%) 4 iron, 4 sulfur cluster binding (32.7%) lyase activity (18.9%)" "IPR004646 (50%) IPR051208 (50%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (50%) Class-I Fumarase/Tartrate Dehydratase (50%)" VKGGFTVELNGIR root "GO:0006412 (24.8%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (24.8%) GO:0005840 (0.3%) GO:1990904 (0%)" "GO:0003735 (24.8%) GO:0003729 (24.8%) GO:0016491 (0.1%)" "translation (24.8%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.8%) ribosome (0.3%) ribonucleoprotein complex (0%)" "structural constituent of ribosome (24.8%) mRNA binding (24.8%) oxidoreductase activity (0.1%)" "IPR003029 (20.1%) IPR012340 (20.1%) IPR050437 (20.1%)" "S1 domain (20.1%) Nucleic acid-binding, OB-fold (20.1%) Small ribosomal subunit protein bS1-like (20.1%)" SLYDVGSYISGAAQPVTLATIYKDDR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0046677 (25%) "GO:0005886 (25%) GO:0030313 (25%)" "GO:0015562 (23.6%) GO:0022857 (1.4%)" response to antibiotic (25%) "plasma membrane (25%) cell envelope (25%)" "efflux transmembrane transporter activity (23.6%) transmembrane transporter activity (1.4%)" "IPR006143 (25.7%) IPR032317 (25.7%) IPR051160 (25.7%)" "RND efflux pump, membrane fusion protein (25.7%) Unknown (25.7%) Unknown (25.7%)" LADPTAMVVATVDEHGQPYQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.4.3.5 (100%) pyridoxal 5'-phosphate synthase (100%) "GO:0008615 (31.8%) GO:0036001 (0.4%) GO:0042823 (0.4%)" "GO:0005829 (0.4%) GO:0032991 (0.4%)" "GO:0004733 (31.8%) GO:0010181 (31.8%) GO:0016491 (1.8%)" "pyridoxine biosynthetic process (31.8%) 'de novo' pyridoxal 5'-phosphate biosynthetic process (0.4%) pyridoxal phosphate biosynthetic process (0.4%)" "cytosol (0.4%) protein-containing complex (0.4%)" "pyridoxamine phosphate oxidase activity (31.8%) FMN binding (31.8%) oxidoreductase activity (1.8%)" "IPR000659 (20.8%) IPR012349 (20.8%) IPR011576 (20.6%)" "Pyridoxamine 5'-phosphate oxidase (20.8%) FMN-binding split barrel (20.8%) Pyridoxamine 5'-phosphate oxidase, N-terminal (20.6%)" DKIYKEYHEAVDQQFDR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR007139 (100%) Protein of unknown function DUF349 (100%) VDVNNVASNFAHPTPNSER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (9.1%) IPR000795 (9.1%) IPR005225 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translational (tr)-type GTP-binding domain (9.1%) Small GTP-binding domain (9.1%)" QYTTVVADTGDIAAMK root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (24.9%) GO:0006098 (24.7%) GO:0009052 (0.1%)" "GO:0005829 (24.9%) GO:0016020 (0.1%)" "GO:0004801 (24.9%) GO:0016740 (0.3%) GO:0016744 (0.1%)" "carbohydrate metabolic process (24.9%) pentose-phosphate shunt (24.7%) pentose-phosphate shunt, non-oxidative branch (0.1%)" "cytosol (24.9%) membrane (0.1%)" "transaldolase activity (24.9%) transferase activity (0.3%) transketolase or transaldolase activity (0.1%)" "IPR001585 (25.5%) IPR013785 (25.5%) IPR018225 (25.5%)" "Transaldolase/Fructose-6-phosphate aldolase (25.5%) Aldolase-type TIM barrel (25.5%) Transaldolase, active site (25.5%)" MVGPIIDELAKEYEGK Pseudomonadati Bacteria Pseudomonadati GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" VGTVLECQK Bacteria Bacteria 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.6%) "GO:0005829 (16.6%) GO:0005737 (0.3%)" "GO:0000049 (16.6%) GO:0004825 (16.6%) GO:0005524 (16.6%)" methionyl-tRNA aminoacylation (16.6%) "cytosol (16.6%) cytoplasm (0.3%)" "tRNA binding (16.6%) methionine-tRNA ligase activity (16.6%) ATP binding (16.6%)" "IPR002547 (8.4%) IPR004495 (8.4%) IPR009080 (8.4%)" "tRNA-binding domain (8.4%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.4%) Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (8.4%)" FGINLSQLGGVLDKLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.1.20 (100%) diaminopimelate decarboxylase (100%) GO:0009089 (33.3%) "GO:0008836 (33.3%) GO:0030170 (33.3%)" lysine biosynthetic process via diaminopimelate (33.3%) "diaminopimelate decarboxylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000183 (14.3%) IPR002986 (14.3%) IPR009006 (14.3%)" "Ornithine/DAP/Arg decarboxylase (14.3%) Diaminopimelate decarboxylase, LysA (14.3%) Alanine racemase/group IV decarboxylase, C-terminal (14.3%)" MTPVVSIIMGSTSDLPVMEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.99.18 (88.2%) 4.1.1.21 (11.8%)" "5-(carboxyamino)imidazole ribonucleotide mutase (88.2%) phosphoribosylaminoimidazole carboxylase (11.8%)" GO:0006189 (30.9%) GO:0016020 (24.7%) "GO:0034023 (30.9%) GO:0016829 (13.6%)" 'de novo' IMP biosynthetic process (30.9%) membrane (24.7%) "5-(carboxyamino)imidazole ribonucleotide mutase activity (30.9%) lyase activity (13.6%)" "IPR000031 (33.3%) IPR024694 (33.3%) IPR033747 (33.3%)" "PurE domain (33.3%) PurE, prokaryotic type (33.3%) Class I PurE (33.3%)" IEGISNANDESDREGMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.6.2.2 (98.6%) 5.99.1.3 (1.4%)" "DNA topoisomerase (ATP-hydrolyzing) (98.6%) Transferred entry: 5.6.2.2 (1.4%)" "GO:0006265 (12.5%) GO:0006261 (12.4%)" "GO:0005737 (12.5%) GO:0009330 (12.5%) GO:0005694 (12.4%)" "GO:0003677 (12.5%) GO:0005524 (12.5%) GO:0034335 (12.4%)" "DNA topological change (12.5%) DNA-templated DNA replication (12.4%)" "cytoplasm (12.5%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.5%) chromosome (12.4%)" "DNA binding (12.5%) ATP binding (12.5%) DNA negative supercoiling activity (12.4%)" "IPR002205 (12.5%) IPR006691 (12.5%) IPR013757 (12.5%)" "DNA topoisomerase, type IIA, domain A (12.5%) DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.5%) DNA topoisomerase, type IIA, alpha-helical domain superfamily (12.5%)" ATTVPVGEDQEPMIEQAR Bacteria Bacteria 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (24.8%) "GO:0005829 (24.6%) GO:0005737 (0.2%) GO:0016020 (0.2%)" "GO:0004830 (24.8%) GO:0005524 (24.8%) GO:0016874 (0.4%)" tryptophanyl-tRNA aminoacylation (24.8%) "cytosol (24.6%) cytoplasm (0.2%) membrane (0.2%)" "tryptophan-tRNA ligase activity (24.8%) ATP binding (24.8%) ligase activity (0.4%)" "IPR001412 (20%) IPR002305 (20%) IPR002306 (20%)" "Aminoacyl-tRNA synthetase, class I, conserved site (20%) Aminoacyl-tRNA synthetase, class Ic (20%) Tryptophan-tRNA ligase (20%)" NLENLLFDEFFIQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" TYDETLNTVKDKEVVMGTVTSMNKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" SAEHEVSLQSAK root 6.3.2.4 (100%) D-alanine--D-alanine ligase (100%) "GO:0009252 (14.3%) GO:0008360 (14.2%) GO:0071555 (14.2%)" GO:0005829 (14.3%) "GO:0008716 (14.4%) GO:0005524 (14.2%) GO:0046872 (14.2%)" "peptidoglycan biosynthetic process (14.3%) regulation of cell shape (14.2%) cell wall organization (14.2%)" cytosol (14.3%) "D-alanine-D-alanine ligase activity (14.4%) ATP binding (14.2%) metal ion binding (14.2%)" "IPR011127 (14.5%) IPR016185 (14.5%) IPR000291 (14.3%)" "D-alanine--D-alanine ligase, N-terminal domain (14.5%) Pre-ATP-grasp domain superfamily (14.5%) D-alanine--D-alanine ligase/VANA/B/C, conserved site (14.3%)" ITPATQTTGIEGVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.16 (100%) cysteine--tRNA ligase (100%) GO:0006423 (20%) GO:0005829 (20%) "GO:0004817 (20%) GO:0005524 (20%) GO:0008270 (20%)" cysteinyl-tRNA aminoacylation (20%) cytosol (20%) "cysteine-tRNA ligase activity (20%) ATP binding (20%) zinc ion binding (20%)" "IPR009080 (14.3%) IPR014729 (14.3%) IPR015273 (14.3%)" "Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (14.3%) Rossmann-like alpha/beta/alpha sandwich fold (14.3%) Cysteinyl-tRNA synthetase, class Ia, DALR (14.3%)" NLLSALKDTDKGYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) "IPR004155 (25%) IPR010496 (25%) IPR011989 (25%)" "PBS lyase HEAT-like repeat (25%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (25%) Armadillo-like helical (25%)" PMFVCGVNFDKYTKDMNFVSNASCTTNCLAPIAK Faecousia intestinalis Bacteria Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Faecousia Faecousia intestinalis LKEGQPFMTTSCCPSYVQLAEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.12.7.2 (75%) 1.12.-.- (25%)" "ferredoxin hydrogenase (75%) Acting on hydrogen as donors (25%)" "GO:0046872 (41.7%) GO:0051536 (33.3%) GO:0008901 (8.3%)" "metal ion binding (41.7%) iron-sulfur cluster binding (33.3%) ferredoxin hydrogenase activity (8.3%)" "IPR004108 (16.7%) IPR009016 (16.7%) IPR017896 (16.7%)" "Iron hydrogenase, large subunit, C-terminal (16.7%) Iron hydrogenase (16.7%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (16.7%)" SIKYPVIAQENGIQGR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0015031 (16.7%) GO:0015891 (16.7%) GO:0055085 (16.7%)" "GO:0030288 (16.7%) GO:0098797 (16.7%)" GO:0031992 (16.7%) "protein transport (16.7%) siderophore transport (16.7%) transmembrane transport (16.7%)" "outer membrane-bounded periplasmic space (16.7%) plasma membrane protein complex (16.7%)" energy transducer activity (16.7%) "IPR003538 (25%) IPR006260 (25%) IPR037682 (25%)" "Gram-negative bacterial TonB protein (25%) TonB/TolA, C-terminal (25%) TonB, C-terminal (25%)" VDTGGLALLLHLIDLAK root "GO:0006974 (1.3%) GO:0015914 (1.3%) GO:0046677 (1.3%)" "GO:0005737 (85.5%) GO:0005829 (1.3%) GO:0016020 (1.3%)" "GO:0005548 (1.3%) GO:0120014 (1.3%)" "DNA damage response (1.3%) phospholipid transport (1.3%) response to antibiotic (1.3%)" "cytoplasm (85.5%) cytosol (1.3%) membrane (1.3%)" "phospholipid transporter activity (1.3%) phospholipid transfer activity (1.3%)" "IPR002645 (24.4%) IPR036513 (24.4%) IPR049743 (24.2%)" "STAS domain (24.4%) STAS domain superfamily (24.4%) Intermembrane phospholipid transport system binding protein MlaB (24.2%)" ISLFDPEVAGLEAKDCLFR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR012808 (50%) IPR015996 (50%)" "Conserved hypothetical protein CHP02453 (50%) Uncharacterised conserved protein UCP028451 (50%)" QFATTSEVGAVYGPVFENDKYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000297 (25%) IPR027304 (25%) IPR046357 (25%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (25%) Trigger factor/SurA domain superfamily (25%) Peptidyl-prolyl cis-trans isomerase domain superfamily (25%)" MYSKPQLEIYADDVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20.1%) IPR037284 (20.1%) IPR055346 (20.1%)" "SUF system FeS cluster assembly, SufBD core domain (20.1%) SUF system FeS cluster assembly, SufBD superfamily (20.1%) SUF system FeS cluster assembly, SufBD (20.1%)" ELVSNAVDATQK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006457 (0%) GO:0006974 (0%) GO:0009408 (0%)" "GO:0005737 (2.3%) GO:0005829 (0%)" "GO:0005524 (24.1%) GO:0016887 (24.1%) GO:0051082 (24.1%)" "protein folding (0%) DNA damage response (0%) response to heat (0%)" "cytoplasm (2.3%) cytosol (0%)" "ATP binding (24.1%) ATP hydrolysis activity (24.1%) unfolded protein binding (24.1%)" "IPR001404 (17.1%) IPR020575 (17.1%) IPR036890 (17%)" "Heat shock protein Hsp90 family (17.1%) Heat shock protein Hsp90, N-terminal (17.1%) Histidine kinase/HSP90-like ATPase superfamily (17%)" YKGLGEMNDHQLWDTTMNPENR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006261 (12%) GO:0006265 (12%) GO:0032259 (2%)" "GO:0005694 (12%) GO:0005737 (12%)" "GO:0003677 (12%) GO:0005524 (12%) GO:0034335 (12%)" "DNA-templated DNA replication (12%) DNA topological change (12%) methylation (2%)" "chromosome (12%) cytoplasm (12%)" "DNA binding (12%) ATP binding (12%) DNA negative supercoiling activity (12%)" "IPR000565 (7.4%) IPR001241 (7.4%) IPR002288 (7.4%)" "DNA topoisomerase, type IIA, subunit B (7.4%) DNA topoisomerase, type IIA (7.4%) DNA gyrase B subunit, C-terminal (7.4%)" RILNEEGLGTSYMAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) "GO:0006633 (20.1%) GO:0044550 (20.1%)" GO:0005737 (20.1%) "GO:0004315 (20.1%) GO:0033818 (19.8%)" "fatty acid biosynthetic process (20.1%) secondary metabolite biosynthetic process (20.1%)" cytoplasm (20.1%) "3-oxoacyl-[acyl-carrier-protein] synthase activity (20.1%) beta-ketoacyl-acyl-carrier-protein synthase III activity (19.8%)" "IPR004655 (25%) IPR013747 (25%) IPR013751 (25%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III (25%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (25%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (25%)" SMFNVVNPDMIVEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.4 (100%) leucine--tRNA ligase (100%) GO:0006429 (20%) "GO:0005829 (20%) GO:0005739 (0.1%)" "GO:0004823 (20%) GO:0005524 (20%) GO:0002161 (19.7%)" leucyl-tRNA aminoacylation (20%) "cytosol (20%) mitochondrion (0.1%)" "leucine-tRNA ligase activity (20%) ATP binding (20%) aminoacyl-tRNA deacylase activity (19.7%)" "IPR002302 (12.6%) IPR013155 (12.6%) IPR009080 (12.5%)" "Leucine-tRNA ligase (12.6%) Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding (12.6%) Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (12.5%)" SYPGDCTVTVCHSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.5.1.5 (50%) 3.5.4.9 (50%)" "methylenetetrahydrofolate dehydrogenase (NADP(+)) (50%) methenyltetrahydrofolate cyclohydrolase (50%)" "GO:0000105 (14.3%) GO:0006164 (14.3%) GO:0009086 (14.3%)" GO:0005829 (14.3%) "GO:0004477 (14.3%) GO:0004488 (14.3%)" "L-histidine biosynthetic process (14.3%) purine nucleotide biosynthetic process (14.3%) methionine biosynthetic process (14.3%)" cytosol (14.3%) "methenyltetrahydrofolate cyclohydrolase activity (14.3%) methylenetetrahydrofolate dehydrogenase (NADP+) activity (14.3%)" "IPR000672 (16.7%) IPR020630 (16.7%) IPR020631 (16.7%)" "Tetrahydrofolate dehydrogenase/cyclohydrolase (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (16.7%)" NVVAGDPSPDGQGTLLIK root 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) GO:0005829 (20%) "GO:0004827 (20%) GO:0002161 (20%) GO:0005524 (19.9%)" prolyl-tRNA aminoacylation (20%) cytosol (20%) "proline-tRNA ligase activity (20%) aminoacyl-tRNA deacylase activity (20%) ATP binding (19.9%)" "IPR036754 (7.8%) IPR045864 (7.8%) IPR050062 (7.8%)" "YbaK/aminoacyl-tRNA synthetase-associated domain superfamily (7.8%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (7.8%) Proline-tRNA synthetase (7.8%)" EAAEKDKVSNQQDDMTK root "GO:0006413 (0.1%) GO:0009409 (0.1%) GO:0061077 (0.1%)" "GO:0005829 (19.8%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0003743 (21.9%) GO:0005525 (19.8%) GO:0003924 (19.5%)" "translational initiation (0.1%) response to cold (0.1%) obsolete chaperone-mediated protein folding (0.1%)" "cytosol (19.8%) cytoplasm (0.1%) membrane (0.1%)" "translation initiation factor activity (21.9%) GTP binding (19.8%) GTPase activity (19.5%)" "IPR006847 (7.5%) IPR013575 (7.4%) IPR015760 (7.3%)" "Translation initiation factor IF-2, N-terminal (7.5%) Initiation factor 2 associated domain, bacterial (7.4%) Translation initiation factor IF- 2 (7.3%)" LDGFGHTFWIIDEDKDIAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR008323 (100%) Uncharacterised conserved protein UCP033563 (100%) GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Simiiformes Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Euarchontoglires Primates Haplorrhini Simiiformes "GO:0045109 (13.8%) GO:0030855 (12.6%) GO:0043588 (11.5%)" "GO:0005829 (12.6%) GO:0005882 (10.3%) GO:0005856 (3.4%)" "GO:0005198 (10.3%) GO:0030280 (2.3%) GO:0005200 (1.1%)" "intermediate filament organization (13.8%) epithelial cell differentiation (12.6%) skin development (11.5%)" "cytosol (12.6%) intermediate filament (10.3%) cytoskeleton (3.4%)" "structural molecule activity (10.3%) structural constituent of skin epidermis (2.3%) structural constituent of cytoskeleton (1.1%)" "IPR002957 (34.3%) IPR039008 (34.3%) IPR018039 (31.4%)" "Keratin, type I (34.3%) Intermediate filament, rod domain (34.3%) Intermediate filament protein, conserved site (31.4%)" FAASAAAVHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25%) GO:0006099 (24.4%)" "GO:0004459 (25%) GO:0030060 (24.4%) GO:0016491 (0.6%)" "lactate metabolic process (25%) tricarboxylic acid cycle (24.4%)" "L-lactate dehydrogenase (NAD+) activity (25%) L-malate dehydrogenase (NAD+) activity (24.4%) oxidoreductase activity (0.6%)" "IPR015955 (16.9%) IPR022383 (16.9%) IPR001236 (16.5%)" "Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (16.9%) Lactate/malate dehydrogenase, C-terminal (16.9%) Lactate/malate dehydrogenase, N-terminal (16.5%)" KYVLAGEGK Bacteria Bacteria 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.4%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.4%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" AAVDATAVSPEELQAK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006006 (30%) GO:0005829 (33.3%) "GO:0008861 (33.3%) GO:0016746 (3.3%)" glucose metabolic process (30%) cytosol (33.3%) "formate C-acetyltransferase activity (33.3%) acyltransferase activity (3.3%)" "IPR004184 (21.2%) IPR050244 (21.2%) IPR001150 (19.2%)" "Pyruvate formate lyase domain (21.2%) Autonomous Glycyl Radical Cofactor (21.2%) Glycine radical domain (19.2%)" KANAQAEQPQTNYK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "1.8.4.11 (50%) 1.8.4.12 (50%)" "peptide-methionine (S)-S-oxide reductase (50%) peptide-methionine (R)-S-oxide reductase (50%)" "GO:0006979 (17.7%) GO:0030091 (17.7%)" GO:0005737 (17.7%) "GO:0008113 (17.7%) GO:0033743 (17.7%) GO:0033744 (11.4%)" "response to oxidative stress (17.7%) protein repair (17.7%)" cytoplasm (17.7%) "peptide-methionine (S)-S-oxide reductase activity (17.7%) peptide-methionine (R)-S-oxide reductase activity (17.7%) L-methionine (S)-S-oxide reductase activity (11.4%)" "IPR002569 (20%) IPR002579 (20%) IPR011057 (20%)" "Peptide methionine sulphoxide reductase MsrA domain (20%) Peptide methionine sulphoxide reductase MrsB domain (20%) Mss4-like superfamily (20%)" CGVEVTQTK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (14.9%) GO:0006412 (0%) GO:0006352 (0%)" "GO:0000428 (15.1%) GO:0005829 (10.9%) GO:0031981 (0%)" "GO:0003677 (14.9%) GO:0003899 (14.9%) GO:0000287 (14.2%)" "DNA-templated transcription (14.9%) translation (0%) DNA-templated transcription initiation (0%)" "DNA-directed RNA polymerase complex (15.1%) cytosol (10.9%) nuclear lumen (0%)" "DNA binding (14.9%) DNA-directed RNA polymerase activity (14.9%) magnesium ion binding (14.2%)" "IPR007080 (9.3%) IPR044893 (9.3%) IPR045867 (9.2%)" "RNA polymerase Rpb1, domain 1 (9.3%) RNA polymerase Rpb1, clamp domain superfamily (9.3%) DNA-directed RNA polymerase, subunit beta-prime (9.2%)" GIDEQQYADIIVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) "GO:0005524 (50%) GO:0003824 (29.4%) GO:0016874 (11.8%)" "ATP binding (50%) catalytic activity (29.4%) ligase activity (11.8%)" "IPR013815 (20.7%) IPR003781 (19.5%) IPR016102 (19.5%)" "ATP-grasp fold, subdomain 1 (20.7%) CoA-binding (19.5%) Succinyl-CoA synthetase-like (19.5%)" GVVSPVKEPEKVNMYIFR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.42 (100%) isocitrate dehydrogenase (NADP(+)) (100%) "GO:0006099 (20.4%) GO:0006097 (18.4%)" "GO:0004450 (20.4%) GO:0000287 (18.4%) GO:0051287 (18.4%)" "tricarboxylic acid cycle (20.4%) glyoxylate cycle (18.4%)" "isocitrate dehydrogenase (NADP+) activity (20.4%) magnesium ion binding (18.4%) NAD binding (18.4%)" "IPR004439 (34.5%) IPR024084 (34.5%) IPR019818 (31%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (34.5%) Isopropylmalate dehydrogenase-like domain (34.5%) Isocitrate/isopropylmalate dehydrogenase, conserved site (31%)" EGEELLDEDIPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0042254 (32.1%) "GO:0005525 (32.1%) GO:0043022 (32.1%) GO:0016787 (3.6%)" ribosome biogenesis (32.1%) "GTP binding (32.1%) ribosome binding (32.1%) hydrolase activity (3.6%)" "IPR005225 (14.3%) IPR006073 (14.3%) IPR015946 (14.3%)" "Small GTP-binding domain (14.3%) GTP binding domain (14.3%) K homology domain-like, alpha/beta (14.3%)" MNKAELINAMAAESGLSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" TVICEIVEAIEFDQLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR007139 (100%) Protein of unknown function DUF349 (100%) GDLSNYTLKDGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.11.1.24 (94.7%) 1.11.1.- (5.3%)" "thioredoxin-dependent peroxiredoxin (94.7%) Peroxidases (5.3%)" "GO:0008379 (94.7%) GO:0004601 (5.3%)" "thioredoxin peroxidase activity (94.7%) peroxidase activity (5.3%)" "IPR036249 (17.3%) IPR050455 (17.3%) IPR002065 (16.4%)" "Thioredoxin-like superfamily (17.3%) Thiol Peroxidase Tpx Subfamily (17.3%) Thiol peroxidase Tpx (16.4%)" LAYQAGDLDKAQSYVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" TNNAALAQILVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (51.4%) IPR019734 (48.6%)" "Tetratricopeptide-like helical domain superfamily (51.4%) Tetratricopeptide repeat (48.6%)" IIGFTDNTGKVDYNQTLSEKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (16.7%) IPR006665 (16.7%) IPR006690 (16.7%)" "Outer membrane protein, bacterial (16.7%) OmpA-like domain (16.7%) Outer membrane protein, OmpA-like, conserved site (16.7%)" NNGNGGMHHLAFAVEDGVANALAEAETTGIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (46.2%) "GO:0004493 (46.2%) GO:0016829 (3.8%) GO:0051213 (3.8%)" L-methylmalonyl-CoA metabolic process (46.2%) "methylmalonyl-CoA epimerase activity (46.2%) lyase activity (3.8%) dioxygenase activity (3.8%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" IDAAFQDEVAASEGFLKQPVGKDYK root 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (49.4%) GO:1903810 (0.1%)" "GO:0030288 (49.5%) GO:0030313 (0.3%) GO:0016020 (0.1%)" "GO:0005524 (0.2%) GO:0016597 (0.2%) GO:0016787 (0.1%)" "amino acid transport (49.4%) L-histidine import across plasma membrane (0.1%)" "outer membrane-bounded periplasmic space (49.5%) cell envelope (0.3%) membrane (0.1%)" "ATP binding (0.2%) amino acid binding (0.2%) hydrolase activity (0.1%)" "IPR001638 (33.9%) IPR005768 (33.1%) IPR018313 (33%)" "Solute-binding protein family 3/N-terminal domain of MltF (33.9%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (33.1%) Solute-binding protein family 3, conserved site (33%)" MMSESNKQQAVNK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.2.1.32 (100%) L(+)-tartrate dehydratase (100%) "GO:0006099 (0.3%) GO:0044010 (0.3%) GO:1901275 (0.3%)" "GO:0005829 (0.3%) GO:1902494 (0.3%)" "GO:0046872 (32.4%) GO:0051539 (32.4%) GO:0016829 (18.4%)" "tricarboxylic acid cycle (0.3%) single-species biofilm formation (0.3%) tartrate metabolic process (0.3%)" "cytosol (0.3%) catalytic complex (0.3%)" "metal ion binding (32.4%) 4 iron, 4 sulfur cluster binding (32.4%) lyase activity (18.4%)" "IPR004646 (50%) IPR051208 (50%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (50%) Class-I Fumarase/Tartrate Dehydratase (50%)" MENKIQELTDKIYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0033178 (49%) "GO:0046961 (49%) GO:0016787 (2.1%)" proton-transporting two-sector ATPase complex, catalytic domain (49%) "proton-transporting ATPase activity, rotational mechanism (49%) hydrolase activity (2.1%)" IPR002842 (100%) V-type ATPase subunit E (100%) LMNENPMHYCPGCSHGVIHK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.2.7.1 (100%) pyruvate synthase (100%) GO:0044281 (31.8%) "GO:0030976 (34.1%) GO:0016625 (31.8%) GO:0019164 (2.3%)" small molecule metabolic process (31.8%) "thiamine pyrophosphate binding (34.1%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (31.8%) pyruvate synthase activity (2.3%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" LIAELNDFLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.3%) GO:0006002 (13.9%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "response to glucose (14.3%) fructose 6-phosphate metabolic process (13.9%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25.2%) IPR011183 (25.2%) IPR035966 (25.2%)" "Phosphofructokinase domain (25.2%) Pyrophosphate-dependent phosphofructokinase PfpB (25.2%) Phosphofructokinase superfamily (25.2%)" YLHIPASEIVNCR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (34.5%) "GO:0016615 (30.9%) GO:0016616 (30.9%) GO:0030060 (3.6%)" malate metabolic process (34.5%) "malate dehydrogenase activity (30.9%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (30.9%) L-malate dehydrogenase (NAD+) activity (3.6%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" AIDDKEQFFELYALK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006605 (20%) GO:0043952 (20%) GO:0065002 (20%)" GO:0005886 (20%) GO:0015450 (20%) "protein targeting (20%) protein transport by the Sec complex (20%) intracellular protein transmembrane transport (20%)" plasma membrane (20%) protein-transporting ATPase activity (20%) "IPR004869 (10%) IPR005665 (10%) IPR005791 (10%)" "Membrane transport protein MMPL domain (10%) Protein-export membrane protein SecF, bacterial (10%) Protein translocase subunit SecD (10%)" IVLPEGDEPR root "2.3.1.8 (99.9%) 2.3.1.222 (0.1%)" "phosphate acetyltransferase (99.9%) phosphate propanoyltransferase (0.1%)" "GO:0006085 (27.4%) GO:0006083 (0%) GO:0019413 (0%)" "GO:0005737 (34.6%) GO:0016020 (0.4%) GO:0009507 (0.1%)" "GO:0008959 (36%) GO:0016407 (0.9%) GO:0016746 (0.4%)" "acetyl-CoA biosynthetic process (27.4%) acetate metabolic process (0%) acetate biosynthetic process (0%)" "cytoplasm (34.6%) membrane (0.4%) chloroplast (0.1%)" "phosphate acetyltransferase activity (36%) acetyltransferase activity (0.9%) acyltransferase activity (0.4%)" "IPR042113 (11.4%) IPR002505 (11.4%) IPR050500 (11.4%)" "Phosphate acetyltransferase, domain 1 (11.4%) Phosphate acetyl/butaryl transferase (11.4%) Phosphate Acetyltransferase/Butyryltransferase (11.4%)" HIYAQVIAPNGSETLVAASTVEK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR004389 (33.3%) IPR005484 (33.3%) IPR057268 (33.3%)" "Large ribosomal subunit protein uL18, bacteria (33.3%) Large ribosomal subunit protein uL18, bacterial/plantae/animalia (33.3%) Large ribosomal subunit protein uL18 (33.3%)" GSHDFQLTEDTNGER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.23 (100%) orotidine-5'-phosphate decarboxylase (100%) "GO:0006207 (32.9%) GO:0044205 (32.9%)" "GO:0004590 (32.9%) GO:0016829 (1.4%)" "'de novo' pyrimidine nucleobase biosynthetic process (32.9%) 'de novo' UMP biosynthetic process (32.9%)" "orotidine-5'-phosphate decarboxylase activity (32.9%) lyase activity (1.4%)" "IPR001754 (25%) IPR011060 (25%) IPR011995 (25%)" "Orotidine 5'-phosphate decarboxylase domain (25%) Ribulose-phosphate binding barrel (25%) Orotidine 5'-phosphate decarboxylase, type 2 (25%)" SYLPGYVLVEAALVGEVSHHLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006353 (20%) GO:0006354 (20%) GO:0031564 (20%)" GO:0005829 (20%) "DNA-templated transcription termination (20%) DNA-templated transcription elongation (20%) transcription antitermination (20%)" cytosol (20%) "IPR001062 (12.5%) IPR005824 (12.5%) IPR006645 (12.5%)" "Transcription antitermination protein, NusG (12.5%) KOW (12.5%) NusG-like, N-terminal (12.5%)" IKEVATTLGIPREEVQNYGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.3 (100%) formate--tetrahydrofolate ligase (100%) GO:0035999 (33.3%) "GO:0004329 (33.3%) GO:0005524 (33.3%)" tetrahydrofolate interconversion (33.3%) "formate-tetrahydrofolate ligase activity (33.3%) ATP binding (33.3%)" "IPR000559 (33.3%) IPR020628 (33.3%) IPR027417 (33.3%)" "Formate-tetrahydrofolate ligase, FTHFS (33.3%) Formate-tetrahydrofolate ligase, FTHFS, conserved site (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" VNVLDTLKEYNAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" DYKGHKFDLAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" GLVTEGVEEVIKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.4.1.13 (81.1%) 1.4.1.14 (18.9%)" "glutamate synthase (NADPH) (81.1%) glutamate synthase (NADH) (18.9%)" GO:0006221 (0.6%) "GO:0051536 (47.3%) GO:0016491 (36.6%) GO:0004355 (11.5%)" pyrimidine nucleotide biosynthetic process (0.6%) "iron-sulfur cluster binding (47.3%) oxidoreductase activity (36.6%) glutamate synthase (NADPH) activity (11.5%)" "IPR019480 (10.1%) IPR039261 (10.1%) IPR009051 (10%)" "Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain (10.1%) Ferredoxin-NADP reductase (FNR), nucleotide-binding domain (10.1%) Alpha-helical ferredoxin (10%)" SAEPGVLFWDTILR Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20%) GO:0009263 (17.3%)" "GO:0004748 (20.9%) GO:0031419 (20.9%) GO:0005524 (17.3%)" "DNA biosynthetic process (20%) deoxyribonucleotide biosynthetic process (17.3%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.9%) cobalamin binding (20.9%) ATP binding (17.3%)" "IPR000788 (26.2%) IPR050862 (26.2%) IPR013344 (26%)" "Ribonucleotide reductase large subunit, C-terminal (26.2%) Ribonucleoside diphosphate reductase class-2 (26.2%) Ribonucleotide reductase, adenosylcobalamin-dependent (26%)" ICDLAEKYDALVMVDESHSAGVVGPTGHGVAEQFDVYGR MKANPVFSLYIPTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.1 (66.7%) 1.1.1.202 (33.3%)" "alcohol dehydrogenase (66.7%) 1,3-propanediol dehydrogenase (33.3%)" "GO:0004022 (48.6%) GO:0046872 (48.6%) GO:0047516 (2.9%)" "alcohol dehydrogenase (NAD+) activity (48.6%) metal ion binding (48.6%) 1,3-propanediol dehydrogenase activity (2.9%)" "IPR001670 (33.3%) IPR039697 (33.3%) IPR056798 (33.3%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (33.3%) Iron-type alcohol dehydrogenase-like (33.3%) Fe-containing alcohol dehydrogenase-like, C-terminal (33.3%)" GYVTDLFSDGEAGYKGFTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" MMSQLLDSAVFPGIQGGPLEHVIAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.1%) GO:0035999 (14.9%) GO:0032259 (12%)" GO:0005829 (15.1%) "GO:0004372 (15.1%) GO:0030170 (15.1%) GO:0008168 (12%)" "glycine biosynthetic process from serine (15.1%) tetrahydrofolate interconversion (14.9%) methylation (12%)" cytosol (15.1%) "glycine hydroxymethyltransferase activity (15.1%) pyridoxal phosphate binding (15.1%) methyltransferase activity (12%)" "IPR015421 (14.3%) IPR015422 (14.3%) IPR015424 (14.3%)" "Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%) Pyridoxal phosphate-dependent transferase (14.3%)" DCVTTSDDPQAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.99.- (75.7%) 5.4.99.22 (24.3%)" "Transferring other groups (75.7%) 23S rRNA pseudouridine(2605) synthase (24.3%)" "GO:0000455 (21.6%) GO:0001522 (8.8%) GO:0006364 (8.8%)" "GO:0003723 (30.4%) GO:0120159 (21.6%) GO:0160139 (7.2%)" "enzyme-directed rRNA pseudouridine synthesis (21.6%) pseudouridine synthesis (8.8%) rRNA processing (8.8%)" "RNA binding (30.4%) rRNA pseudouridine synthase activity (21.6%) 23S rRNA pseudouridine(2605) synthase activity (7.2%)" "IPR002942 (11.2%) IPR006145 (11.2%) IPR018496 (11.2%)" "RNA-binding S4 domain (11.2%) Pseudouridine synthase, RsuA/RluA-like (11.2%) Pseudouridine synthase, RsuA/RluB/E/F, conserved site (11.2%)" LGFTAENVYNQVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.2.1.1 (94.8%) 2.2.1.- (5.2%)" "transketolase (94.8%) Transketolases and transaldolases (5.2%)" GO:0006098 (25.1%) "GO:0005829 (25.1%) GO:0016020 (0.2%)" "GO:0004802 (25.1%) GO:0046872 (24.4%) GO:0047896 (0.2%)" pentose-phosphate shunt (25.1%) "cytosol (25.1%) membrane (0.2%)" "transketolase activity (25.1%) metal ion binding (24.4%) formaldehyde transketolase activity (0.2%)" "IPR009014 (12.8%) IPR033247 (12.8%) IPR055152 (12.8%)" "Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.8%) Transketolase family (12.8%) Transketolase-like, C-terminal domain (12.8%)" ALSMVPLEGQLAEADNWNYCVANVSSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "1.2.7.1 (80%) 1.2.7.- (20%)" "pyruvate synthase (80%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (12.8%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (12.8%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" VAKAPVVVPAGVDVK root "GO:0002181 (24.5%) GO:0006412 (0.3%) GO:0000027 (0.1%)" "GO:0022625 (24.5%) GO:0005840 (0.9%) GO:1990904 (0.1%)" "GO:0003735 (24.8%) GO:0019843 (24.7%) GO:0070180 (0.1%)" "cytoplasmic translation (24.5%) translation (0.3%) ribosomal large subunit assembly (0.1%)" "cytosolic large ribosomal subunit (24.5%) ribosome (0.9%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.8%) rRNA binding (24.7%) large ribosomal subunit rRNA binding (0.1%)" "IPR036789 (20.2%) IPR020040 (20.2%) IPR000702 (20%)" "Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily (20.2%) Large ribosomal subunit protein uL6, alpha-beta domain (20.2%) Large ribosomal subunit protein uL6-like (20%)" TLKEDILEGFKIGADDYITKPFSMEELTFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006355 (20%) GO:0000160 (0.2%)" "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" "regulation of DNA-templated transcription (20%) phosphorelay signal transduction system (0.2%)" "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (17.3%) IPR001867 (17.3%) IPR011006 (17.3%)" "Signal transduction response regulator, receiver domain (17.3%) OmpR/PhoB-type DNA-binding domain (17.3%) CheY-like superfamily (17.3%)" GSGAFGTFTVTHDITK root 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" "GO:0005737 (16.7%) GO:0016020 (0.1%) GO:0042597 (0.1%)" "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" "cytoplasm (16.7%) membrane (0.1%) periplasmic space (0.1%)" "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16%)" "IPR011614 (13.1%) IPR018028 (13.1%) IPR020835 (13%)" "Catalase core domain (13.1%) Catalase, mono-functional, haem-containing (13.1%) Catalase superfamily (13%)" LNVFIQVSEENRPAALETAKELVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.-.-.- (100%) Oxidoreductases (100%) "GO:0003824 (50%) GO:0004497 (50%)" "catalytic activity (50%) monooxygenase activity (50%)" "IPR007138 (33.3%) IPR011008 (33.3%) IPR050744 (33.3%)" "Antibiotic biosynthesis monooxygenase domain (33.3%) Dimeric alpha-beta barrel (33.3%) AI-2 Signaling Cycle Isomerase LsrG (33.3%)" QLSEMDGKKNDYCMVGYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) IPR029044 (100%) Nucleotide-diphospho-sugar transferases (100%) HNDFWQQQAMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.4.1.25 (100%) 4-alpha-glucanotransferase (100%) GO:0005975 (24.8%) GO:0005737 (24.8%) "GO:0004134 (24.8%) GO:2001070 (24.8%) GO:0016757 (0.8%)" carbohydrate metabolic process (24.8%) cytoplasm (24.8%) "4-alpha-glucanotransferase activity (24.8%) starch binding (24.8%) glycosyltransferase activity (0.8%)" "IPR002044 (16.8%) IPR003385 (16.8%) IPR013783 (16.8%)" "Carbohydrate binding module family 20 (16.8%) Glycoside hydrolase, family 77 (16.8%) Immunoglobulin-like fold (16.8%)" QQIEEATSDYDREKLQER root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (16.7%) GO:1990220 (0%) GO:0005829 (0%)" "GO:0140662 (17%) GO:0005524 (16.9%) GO:0016853 (16.9%)" "protein refolding (17%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (16.7%) GroEL-GroES complex (0%) cytosol (0%)" "ATP-dependent protein folding chaperone (17%) ATP binding (16.9%) isomerase activity (16.9%)" "IPR001844 (17%) IPR027409 (17%) IPR002423 (16.7%)" "Chaperonin Cpn60/GroEL (17%) GroEL-like apical domain superfamily (17%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%)" ALESAANLLNESPYQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.5 (100%) xylose isomerase (100%) GO:0042732 (25%) GO:0005737 (25%) "GO:0000287 (25%) GO:0009045 (25%)" D-xylose metabolic process (25%) cytoplasm (25%) "magnesium ion binding (25%) xylose isomerase activity (25%)" "IPR001998 (25%) IPR013022 (25%) IPR013452 (25%)" "Xylose isomerase (25%) Xylose isomerase-like, TIM barrel domain (25%) Xylose isomerase, bacterial-type (25%)" MTGAGMMDCK root "GO:0006225 (0.1%) GO:0006414 (0.1%) GO:0044210 (0.1%)" "GO:0005737 (48%) GO:0005739 (0.8%) GO:0009507 (0.7%)" "GO:0003746 (50%) GO:0003729 (0.1%) GO:0005524 (0.1%)" "UDP biosynthetic process (0.1%) translational elongation (0.1%) 'de novo' CTP biosynthetic process (0.1%)" "cytoplasm (48%) mitochondrion (0.8%) chloroplast (0.7%)" "translation elongation factor activity (50%) mRNA binding (0.1%) ATP binding (0.1%)" "IPR009060 (19.9%) IPR001816 (19.9%) IPR036402 (19.9%)" "UBA-like superfamily (19.9%) Translation elongation factor EFTs/EF1B (19.9%) Elongation factor Ts, dimerisation domain superfamily (19.9%)" QTFAEKPAEFDPR Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.7%) GO:0030388 (24.7%)" GO:0016020 (1.2%) "GO:0004332 (24.7%) GO:0008270 (24.7%)" "glycolytic process (24.7%) fructose 1,6-bisphosphate metabolic process (24.7%)" membrane (1.2%) "fructose-bisphosphate aldolase activity (24.7%) zinc ion binding (24.7%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" EGLAKDEAESLKK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) "GO:0022625 (24.8%) GO:0005840 (0.5%)" "GO:0003735 (25%) GO:0003729 (24.8%)" translation (25%) "cytosolic large ribosomal subunit (24.8%) ribosome (0.5%)" "structural constituent of ribosome (25%) mRNA binding (24.8%)" "IPR013823 (20.3%) IPR014719 (20.3%) IPR000206 (20.1%)" "Large ribosomal subunit protein bL12, C-terminal (20.3%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20.3%) Large ribosomal subunit protein bL12 (20.1%)" YEELQITAGR Sarcopterygii Eukaryota Metazoa Chordata Craniata Sarcopterygii "GO:0031424 (15.8%) GO:0045109 (15.8%) GO:0051290 (1.7%)" "GO:0045095 (16.6%) GO:0005615 (14.9%) GO:0005737 (3.3%)" "GO:0030280 (15.9%) GO:0046982 (1.7%) GO:0030246 (1.7%)" "keratinization (15.8%) intermediate filament organization (15.8%) protein heterotetramerization (1.7%)" "keratin filament (16.6%) extracellular space (14.9%) cytoplasm (3.3%)" "structural constituent of skin epidermis (15.9%) protein heterodimerization activity (1.7%) carbohydrate binding (1.7%)" "IPR039008 (26.2%) IPR003054 (25.7%) IPR032444 (24%)" "Intermediate filament, rod domain (26.2%) Keratin, type II (25.7%) Keratin type II head (24%)" QTLLFGGLESIAHNANRK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) "GO:0006432 (16.5%) GO:0006412 (0.2%)" "GO:0009328 (16.5%) GO:0005737 (0.2%)" "GO:0000049 (16.7%) GO:0004826 (16.7%) GO:0005524 (16.7%)" "phenylalanyl-tRNA aminoacylation (16.5%) translation (0.2%)" "phenylalanine-tRNA ligase complex (16.5%) cytoplasm (0.2%)" "tRNA binding (16.7%) phenylalanine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR005121 (7.8%) IPR036690 (7.8%) IPR041616 (7.8%)" "Ferrodoxin-fold anticodon-binding domain (7.8%) Ferrodoxin-fold anticodon-binding domain superfamily (7.8%) Phenylalanyl tRNA synthetase beta chain, core domain (7.8%)" VLEEGANTLSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (0.9%) GO:0008270 (99.1%) regulation of DNA-templated transcription (0.9%) zinc ion binding (99.1%) "IPR000962 (54.8%) IPR037187 (45.2%)" "Zinc finger, DksA/TraR C4-type (54.8%) DksA, N-terminal domain superfamily (45.2%)" YQELKDIIAILGMDELSEEDKLVVAR root "7.1.2.2 (97%) 3.6.3.14 (2.7%) 3.6.1.15 (0.2%)" "H(+)-transporting two-sector ATPase (97%) Transferred entry: 7.1.2.2 (2.7%) nucleoside-triphosphate phosphatase (0.2%)" GO:0042777 (0%) "GO:0045259 (23.3%) GO:0005886 (22.5%) GO:0016020 (0%)" "GO:0005524 (23.3%) GO:0046933 (23.3%) GO:0016787 (5.6%)" proton motive force-driven plasma membrane ATP synthesis (0%) "proton-transporting ATP synthase complex (23.3%) plasma membrane (22.5%) membrane (0%)" "ATP binding (23.3%) proton-transporting ATP synthase activity, rotational mechanism (23.3%) hydrolase activity (5.6%)" "IPR050053 (10.1%) IPR055190 (10.1%) IPR024034 (10.1%)" "ATPase alpha/beta chains (10.1%) ATP synthase A/B type, C-terminal domain (10.1%) ATPase, F1/V1 complex, beta/alpha subunit, C-terminal (10.1%)" GANFIAVHEMLDGFR root "1.16.-.- (99.4%) 1.16.3.1 (0.5%) 1.-.-.- (0.2%)" "Oxidizing metal ions (99.4%) ferroxidase (0.5%) Oxidoreductases (0.2%)" "GO:0006879 (14.5%) GO:0030261 (14.5%) GO:0006950 (0%)" "GO:0005737 (14.5%) GO:0009295 (11.4%) GO:0016020 (0%)" "GO:0008199 (15.1%) GO:0016722 (15.1%) GO:0003677 (14.6%)" "intracellular iron ion homeostasis (14.5%) chromosome condensation (14.5%) response to stress (0%)" "cytoplasm (14.5%) nucleoid (11.4%) membrane (0%)" "ferric iron binding (15.1%) oxidoreductase activity, acting on metal ions (15.1%) DNA binding (14.6%)" "IPR002177 (16.8%) IPR008331 (16.8%) IPR009078 (16.8%)" "DNA-binding protein Dps (16.8%) Ferritin/DPS domain (16.8%) Ferritin-like superfamily (16.8%)" ESSEVNIGATPLGGNNPIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.17.7.3 (100%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (100%) "GO:0016114 (16.8%) GO:0019288 (16.8%)" "GO:0005506 (16.8%) GO:0046429 (16.8%) GO:0051539 (16.8%)" "terpenoid biosynthetic process (16.8%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (16.8%)" "iron ion binding (16.8%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (16.8%) 4 iron, 4 sulfur cluster binding (16.8%)" "IPR004588 (25%) IPR011005 (25%) IPR017178 (25%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25%) Dihydropteroate synthase-like superfamily (25%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (25%)" LFIPSNLAYGER Pseudomonadati Bacteria Pseudomonadati 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (48.1%) GO:0016020 (3.7%) GO:0003755 (48.1%) protein folding (48.1%) membrane (3.7%) peptidyl-prolyl cis-trans isomerase activity (48.1%) "IPR001179 (22%) IPR046357 (22%) IPR000774 (16.9%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (22%) Peptidyl-prolyl cis-trans isomerase domain superfamily (22%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (16.9%)" IKPYLLNNGQNPPAR root "1.3.5.1 (99.7%) 1.-.-.- (0.2%) 1.3.99.1 (0.2%)" "succinate dehydrogenase (99.7%) Oxidoreductases (0.2%) Deleted entry (0.2%)" "GO:0006099 (12.6%) GO:0022904 (12.6%) GO:0009060 (0.1%)" "GO:0005743 (0%) GO:0005886 (0%) GO:0016020 (0%)" "GO:0009055 (12.4%) GO:0051539 (12.3%) GO:0051537 (12.3%)" "tricarboxylic acid cycle (12.6%) respiratory electron transport chain (12.6%) aerobic respiration (0.1%)" "mitochondrial inner membrane (0%) plasma membrane (0%) membrane (0%)" "electron transfer activity (12.4%) 4 iron, 4 sulfur cluster binding (12.3%) 2 iron, 2 sulfur cluster binding (12.3%)" "IPR004489 (11.3%) IPR050573 (11.3%) IPR025192 (11.1%)" "Succinate dehydrogenase/fumarate reductase iron-sulphur protein (11.3%) Succinate Dehydrogenase/Fumarate Reductase Iron-Sulfur (11.3%) Succinate dehydogenase/fumarate reductase N-terminal (11.1%)" TLAAASSLGMTEKLPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR004389 (34.3%) IPR005484 (34.3%) IPR057268 (31.4%)" "Large ribosomal subunit protein uL18, bacteria (34.3%) Large ribosomal subunit protein uL18, bacterial/plantae/animalia (34.3%) Large ribosomal subunit protein uL18 (31.4%)" QHGTHIHPGENVGR Coriobacteriaceae Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) IPR001684 (100%) Large ribosomal subunit protein bL27 (100%) NTAFEIFYSALETVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (20%) GO:0015935 (20%) "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) small ribosomal subunit (20%) "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" FGEGIFGADKVLSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (19.9%) GO:0042274 (19.9%)" "GO:0015935 (19.9%) GO:0005840 (0.3%)" "GO:0019843 (20.1%) GO:0003735 (19.9%)" "translation (19.9%) ribosomal small subunit biogenesis (19.9%)" "small ribosomal subunit (19.9%) ribosome (0.3%)" "rRNA binding (20.1%) structural constituent of ribosome (19.9%)" "IPR001912 (16.8%) IPR002942 (16.6%) IPR005709 (16.6%)" "Small ribosomal subunit protein uS4, N-terminal (16.8%) RNA-binding S4 domain (16.6%) Small ribosomal subunit protein uS4, bacteria (16.6%)" RVIYSSQAYDANAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" IDMEAAGEAPANK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.1%) "GO:0022627 (32.4%) GO:0005840 (1.5%)" GO:0003735 (33.1%) translation (33.1%) "cytosolic small ribosomal subunit (32.4%) ribosome (1.5%)" structural constituent of ribosome (33.1%) "IPR001865 (25.3%) IPR023591 (25.3%) IPR005706 (24.7%)" "Small ribosomal subunit protein uS2 (25.3%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.3%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (24.7%)" SDGVVPMSEFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" IKGGWTDIDVIITMPSIMGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (16.7%) GO:0006417 (16%)" "GO:0015934 (16.7%) GO:0005840 (0.6%) GO:1990904 (0.4%)" "GO:0003735 (16.7%) GO:0019843 (16.7%) GO:0000049 (16%)" "translation (16.7%) regulation of translation (16%)" "large ribosomal subunit (16.7%) ribosome (0.6%) ribonucleoprotein complex (0.4%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%) tRNA binding (16%)" "IPR016095 (16.8%) IPR023673 (16.8%) IPR023674 (16.8%)" "Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.8%) Large ribosomal subunit protein uL1, conserved site (16.8%) Ribosomal protein uL1-like (16.8%)" WCDGTYLEDQDFFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25.2%) GO:0009341 (25.2%) "GO:0004565 (25.2%) GO:0030246 (24.3%)" lactose catabolic process (25.2%) beta-galactosidase complex (25.2%) "beta-galactosidase activity (25.2%) carbohydrate binding (24.3%)" "IPR006104 (7.3%) IPR008979 (7.3%) IPR050347 (7.3%)" "Glycosyl hydrolases family 2, sugar binding domain (7.3%) Galactose-binding-like domain superfamily (7.3%) Bacterial Beta-galactosidase (7.3%)" ALGVYSEIYPHDITAAELTALPNVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (16.7%) IPR014729 (16.7%) IPR017926 (16.7%)" "GMP synthase, C-terminal (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Glutamine amidotransferase (16.7%)" GGAANPSPPVGPALGSK root "GO:0006412 (24.9%) GO:0006354 (0.1%)" "GO:0022625 (24.8%) GO:0005840 (0.3%) GO:1990904 (0.2%)" "GO:0003735 (24.9%) GO:0070180 (24.8%)" "translation (24.9%) DNA-templated transcription elongation (0.1%)" "cytosolic large ribosomal subunit (24.8%) ribosome (0.3%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (24.9%) large ribosomal subunit rRNA binding (24.8%)" "IPR020784 (14.7%) IPR036796 (14.7%) IPR000911 (14.6%)" "Large ribosomal subunit protein uL11, N-terminal (14.7%) Large ribosomal subunit protein uL11, N-terminal domain superfamily (14.7%) Ribosomal protein uL11 (14.6%)" YKGLPALTASEFLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0016226 (0.6%) GO:1990229 (0.6%) "GO:0005524 (49.4%) GO:0016887 (49.4%)" iron-sulfur cluster assembly (0.6%) iron-sulfur cluster assembly complex (0.6%) "ATP binding (49.4%) ATP hydrolysis activity (49.4%)" "IPR003439 (25.2%) IPR010230 (25.2%) IPR027417 (25.2%)" "ABC transporter-like, ATP-binding domain (25.2%) FeS cluster assembly SUF system, ATPase SufC (25.2%) P-loop containing nucleoside triphosphate hydrolase (25.2%)" ILCAGIPIMGHLGLTPQSINK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.2.11 (100%) 3-methyl-2-oxobutanoate hydroxymethyltransferase (100%) "GO:0015940 (18.4%) GO:0032259 (13.2%)" GO:0005737 (18.4%) "GO:0000287 (18.4%) GO:0003864 (18.4%) GO:0008168 (13.2%)" "pantothenate biosynthetic process (18.4%) methylation (13.2%)" cytoplasm (18.4%) "magnesium ion binding (18.4%) 3-methyl-2-oxobutanoate hydroxymethyltransferase activity (18.4%) methyltransferase activity (13.2%)" "IPR003700 (33.3%) IPR015813 (33.3%) IPR040442 (33.3%)" "Ketopantoate hydroxymethyltransferase (33.3%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (33.3%) Pyruvate kinase-like domain superfamily (33.3%)" QLINTVHVDMLIVPLRDEEE Pseudomonadati Bacteria Pseudomonadati GO:0006950 (0.5%) "GO:0005737 (98.7%) GO:0016020 (0.3%)" "GO:0042802 (0.3%) GO:0042803 (0.3%)" response to stress (0.5%) "cytoplasm (98.7%) membrane (0.3%)" "identical protein binding (0.3%) protein homodimerization activity (0.3%)" "IPR014729 (33.7%) IPR006016 (33.6%) IPR006015 (32.6%)" "Rossmann-like alpha/beta/alpha sandwich fold (33.7%) UspA (33.6%) Universal stress protein A family (32.6%)" VKEFGPLIVSIDTHGNNLIAENKK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 4.2.1.32 (100%) L(+)-tartrate dehydratase (100%) "GO:0009408 (0.5%) GO:1901276 (0.5%)" "GO:0016020 (1%) GO:1902494 (0.5%)" "GO:0008730 (52.5%) GO:0016836 (40.5%) GO:0016829 (3%)" "response to heat (0.5%) tartrate catabolic process (0.5%)" "membrane (1%) catalytic complex (0.5%)" "L(+)-tartrate dehydratase activity (52.5%) hydro-lyase activity (40.5%) lyase activity (3%)" "IPR004647 (49.5%) IPR036660 (49.5%) IPR001898 (0.5%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (49.5%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (49.5%) Solute carrier family 13 (0.5%)" GIAWTAPAVSIKDEPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) "GO:0005975 (25%) GO:0030203 (25%)" GO:0016020 (25%) GO:0004563 (25%) "carbohydrate metabolic process (25%) glycosaminoglycan metabolic process (25%)" membrane (25%) beta-N-acetylhexosaminidase activity (25%) "IPR011658 (16.7%) IPR015882 (16.7%) IPR015883 (16.7%)" "PA14 domain (16.7%) Beta-hexosaminidase, bacterial type, N-terminal (16.7%) Glycoside hydrolase family 20, catalytic domain (16.7%)" VNVDKEADLASVFGIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" RVVVFSPHPDDDVISMGGTIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.3%) GO:0006044 (31.9%)" "GO:0004342 (32.7%) GO:0016853 (3.2%)" "carbohydrate metabolic process (32.3%) N-acetylglucosamine metabolic process (31.9%)" "glucosamine-6-phosphate deaminase activity (32.7%) isomerase activity (3.2%)" "IPR003737 (15.3%) IPR052960 (15.3%) IPR024078 (15.1%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (15.3%) Glucosamine-6-phosphate deaminase-like (15.3%) Putative deacetylase LmbE-like domain superfamily (15.1%)" IFNDLQHTITGWPGGKPNADDTYRPER Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.5.99.6 (98.9%) 3.1.1.31 (1.1%)" "glucosamine-6-phosphate deaminase (98.9%) 6-phosphogluconolactonase (1.1%)" "GO:0005975 (32.5%) GO:0006044 (32.4%) GO:0006046 (0.2%)" "GO:0004342 (33%) GO:0016853 (1.5%) GO:0016787 (0.3%)" "carbohydrate metabolic process (32.5%) N-acetylglucosamine metabolic process (32.4%) N-acetylglucosamine catabolic process (0.2%)" "glucosamine-6-phosphate deaminase activity (33%) isomerase activity (1.5%) hydrolase activity (0.3%)" "IPR003737 (15.7%) IPR052960 (15.7%) IPR024078 (15.4%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (15.7%) Glucosamine-6-phosphate deaminase-like (15.7%) Putative deacetylase LmbE-like domain superfamily (15.4%)" AMLDLDGTPTK Pseudomonadati Bacteria Pseudomonadati 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (17%) IPR020809 (17%) IPR020810 (17%)" "Enolase (17%) Enolase, conserved site (17%) Enolase, C-terminal TIM barrel domain (17%)" CSIYAVLYEESLDSKGNNIPLTGDYK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR024311 (25%) IPR025112 (25%) IPR032186 (25%)" "Lipocalin-like domain (25%) Putative carbohydrate metabolism domain (25%) Domain of unknown function DUF5018 (25%)" LSIITGDRPVLVLR root GO:0016032 (100%) viral process (100%) IPR019276 (100%) Protein of unkown function DUF2303 (100%) GQATALQDVAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (25%) GO:0006183 (25%)" "GO:0003938 (25%) GO:0046872 (25%)" "GMP biosynthetic process (25%) GTP biosynthetic process (25%)" "IMP dehydrogenase activity (25%) metal ion binding (25%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" FKEKHPIYGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0022627 (24.6%) GO:0005840 (0.5%) GO:1990904 (0.3%)" "GO:0003735 (25%) GO:0019843 (24.6%)" translation (25%) "cytosolic small ribosomal subunit (24.6%) ribosome (0.5%) ribonucleoprotein complex (0.3%)" "structural constituent of ribosome (25%) rRNA binding (24.6%)" "IPR000266 (25.2%) IPR012340 (25.2%) IPR019979 (24.8%)" "Small ribosomal subunit protein uS17 (25.2%) Nucleic acid-binding, OB-fold (25.2%) Small ribosomal subunit protein uS17, conserved site (24.8%)" LKELEEMDFTDVHGSGLTKK Actinomycetes Bacteria Bacillati Actinomycetota Actinomycetes GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (26.1%) IPR005706 (26.1%) IPR023591 (26.1%)" "Small ribosomal subunit protein uS2 (26.1%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (26.1%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (26.1%)" NIEDWEDMIDTNNKGLVYMTR Klebsiella michiganensis Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella michiganensis "1.1.1.298 (40%) 1.1.1.381 (40%) 1.1.1.- (20%)" "3-hydroxypropionate dehydrogenase (NADP(+)) (40%) 3-hydroxy acid dehydrogenase (40%) With NAD(+) or NADP(+) as acceptor (20%)" GO:0005829 (50%) "GO:0016491 (16.7%) GO:0016616 (16.7%) GO:0035527 (16.7%)" cytosol (50%) "oxidoreductase activity (16.7%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (16.7%) 3-hydroxypropionate dehydrogenase (NADP+) activity (16.7%)" "IPR002347 (37.5%) IPR036291 (37.5%) IPR020904 (25%)" "Short-chain dehydrogenase/reductase SDR (37.5%) NAD(P)-binding domain superfamily (37.5%) Short-chain dehydrogenase/reductase, conserved site (25%)" IKHTAIDGGTFQNEITDRNVMGVPAVFVNGK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.8.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0000302 (14.1%) GO:0006979 (0.1%) GO:0042744 (0.1%)" "GO:0005829 (13.9%) GO:0032991 (13.8%) GO:0009321 (0.1%)" "GO:0051287 (14.1%) GO:0102039 (14.1%) GO:0016668 (14%)" "response to reactive oxygen species (14.1%) response to oxidative stress (0.1%) hydrogen peroxide catabolic process (0.1%)" "cytosol (13.9%) protein-containing complex (13.8%) alkyl hydroperoxide reductase complex (0.1%)" "NAD binding (14.1%) NADH-dependent peroxiredoxin activity (14.1%) oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (14%)" "IPR036249 (11.6%) IPR012336 (11.5%) IPR044141 (11.5%)" "Thioredoxin-like superfamily (11.6%) Thioredoxin-like fold (11.5%) AhpF, N-terminal domain, C-terminal TRX-fold subdomain (11.5%)" AKSTLTPVVISNMDEIKELIK root "2.7.1.199 (89.6%) 2.7.1.- (6.3%) 2.7.1.191 (4.2%)" "protein-N(pi)-phosphohistidine--D-glucose phosphotransferase (89.6%) Phosphotransferases with an alcohol group as acceptor (6.3%) protein-N(pi)-phosphohistidine--D-mannose phosphotransferase (4.2%)" "GO:0009401 (32.9%) GO:0034763 (0.1%) GO:0043610 (0.1%)" "GO:0005737 (32.7%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0016301 (32.8%) GO:0046872 (0.9%) GO:0016740 (0.3%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (32.9%) negative regulation of transmembrane transport (0.1%) regulation of carbohydrate utilization (0.1%)" "cytoplasm (32.7%) cytosol (0.1%) membrane (0.1%)" "kinase activity (32.8%) metal ion binding (0.9%) transferase activity (0.3%)" "IPR011055 (33.3%) IPR001127 (33.2%) IPR050890 (33.2%)" "Duplicated hybrid motif (33.3%) Phosphotransferase system, sugar-specific permease EIIA type 1 (33.2%) Phosphotransferase system EIIA component (33.2%)" VNQITAQVIPESQIVMR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR019859 (20.4%) IPR022720 (20.4%) IPR048405 (20.4%)" "Gliding motility-associated protein GldM (20.4%) Gliding motility-associated protein GldM, N-terminal (20.4%) Gliding motility-associated protein GldM, first immunoglobulin-like domain (20.4%)" IAGVNITTDGGAPGSGASIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.5%) IPR008969 (12.5%) IPR012910 (12.5%)" "TonB-dependent receptor-like, beta-barrel (12.5%) Carboxypeptidase-like, regulatory domain superfamily (12.5%) TonB-dependent receptor, plug domain (12.5%)" LKDGEDPGYTLYDLSER root 4.1.1.15 (100%) glutamate decarboxylase (100%) "GO:0006538 (21.1%) GO:0051454 (14.8%)" "GO:0005829 (21.1%) GO:0016020 (0.2%)" "GO:0004351 (21.1%) GO:0030170 (21.1%) GO:0016829 (0.5%)" "L-glutamate catabolic process (21.1%) intracellular pH elevation (14.8%)" "cytosol (21.1%) membrane (0.2%)" "glutamate decarboxylase activity (21.1%) pyridoxal phosphate binding (21.1%) lyase activity (0.5%)" "IPR010107 (21.1%) IPR015424 (21.1%) IPR002129 (20.1%)" "Glutamate decarboxylase (21.1%) Pyridoxal phosphate-dependent transferase (21.1%) Pyridoxal phosphate-dependent decarboxylase (20.1%)" MKTEVILSALEAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (25.6%) GO:0005829 (24.8%) "GO:0004354 (25.6%) GO:0000166 (23.9%)" glutamate biosynthetic process (25.6%) cytosol (24.8%) "glutamate dehydrogenase (NADP+) activity (25.6%) nucleotide binding (23.9%)" "IPR006097 (12.8%) IPR046346 (12.8%) IPR050724 (12.8%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.8%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (12.8%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (12.8%)" RLPPPPENKDQKDDDIIVKER Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0015031 (33.3%) GO:0005886 (33.3%) GO:0022857 (33.3%) protein transport (33.3%) plasma membrane (33.3%) transmembrane transporter activity (33.3%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) ATVDGKDQYLSASPLTNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR024544 (50%) IPR024618 (50%)" "Domain of unknown function DUF3858 (50%) Domain of unknown function DUF3857 (50%)" ELCTIPIIASINCYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.3.1.1 (100%) dihydrouracil dehydrogenase (NAD(+)) (100%) "GO:0006210 (12.3%) GO:0006212 (12.3%) GO:0044205 (8.8%)" GO:0005737 (15.8%) "GO:0004152 (14%) GO:0002058 (12.3%) GO:0050661 (12.3%)" "thymine catabolic process (12.3%) uracil catabolic process (12.3%) 'de novo' UMP biosynthetic process (8.8%)" cytoplasm (15.8%) "dihydroorotate dehydrogenase activity (14%) uracil binding (12.3%) NADP binding (12.3%)" "IPR005720 (31%) IPR012135 (31%) IPR013785 (31%)" "Dihydroorotate dehydrogenase, catalytic (31%) Dihydroorotate dehydrogenase, class 1/ 2 (31%) Aldolase-type TIM barrel (31%)" MSGAGMMDCKK root GO:0070125 (4.4%) "GO:0005737 (35.6%) GO:0005739 (5.9%) GO:0009507 (5.9%)" "GO:0003746 (42.2%) GO:0003729 (5.9%)" mitochondrial translational elongation (4.4%) "cytoplasm (35.6%) mitochondrion (5.9%) chloroplast (5.9%)" "translation elongation factor activity (42.2%) mRNA binding (5.9%)" "IPR001816 (18.3%) IPR009060 (18.3%) IPR014039 (18.3%)" "Translation elongation factor EFTs/EF1B (18.3%) UBA-like superfamily (18.3%) Translation elongation factor EFTs/EF1B, dimerisation (18.3%)" TSEDINDALNYR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.1.99.7 (100%) dihydroneopterin triphosphate 2'-epimerase (100%) "GO:0006760 (20%) GO:0042559 (19.2%)" "GO:0005829 (20%) GO:0005737 (0.2%)" "GO:0004150 (20%) GO:0008719 (20%) GO:0016853 (0.4%)" "folic acid-containing compound metabolic process (20%) pteridine-containing compound biosynthetic process (19.2%)" "cytosol (20%) cytoplasm (0.2%)" "dihydroneopterin aldolase activity (20%) dihydroneopterin triphosphate 2'-epimerase activity (20%) isomerase activity (0.4%)" "IPR006156 (33.3%) IPR006157 (33.3%) IPR043133 (33.3%)" "Dihydroneopterin aldolase (33.3%) Dihydroneopterin aldolase/epimerase domain (33.3%) GTP cyclohydrolase I, C-terminal/NADPH-dependent 7-cyano-7-deazaguanine reductase (33.3%)" TPVIVHANCVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (29.9%) GO:0003863 (3.4%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (29.9%) branched-chain 2-oxo acid dehydrogenase activity (3.4%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" VFFTCDSHEQLLPLEQAINAR root "3.1.3.23 (48.9%) 3.1.3.74 (48.9%) 3.6.1.- (2.1%)" "sugar-phosphatase (48.9%) pyridoxal phosphatase (48.9%) In phosphorus-containing anhydrides (2.1%)" GO:0006950 (0.5%) "GO:0005829 (0.5%) GO:0005886 (0.5%)" "GO:0000287 (46%) GO:0016791 (40.5%) GO:0033883 (6%)" response to stress (0.5%) "cytosol (0.5%) plasma membrane (0.5%)" "magnesium ion binding (46%) phosphatase activity (40.5%) pyridoxal phosphatase activity (6%)" "IPR036412 (25.1%) IPR023214 (24.9%) IPR006379 (24.6%)" "HAD-like superfamily (25.1%) HAD superfamily (24.9%) HAD-superfamily hydrolase, subfamily IIB (24.6%)" GIASMHCSANTNMDETSSAIFFGLSGTGK NFIGTHTIQEFVESIERPRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" VVGDHMGMLATVMNGLAMR root "2.7.4.22 (99.9%) 2.7.4.- (0.1%)" "UMP kinase (99.9%) Phosphotransferases with a phosphate group as acceptor (0.1%)" "GO:0006225 (20.7%) GO:0044210 (17.1%) GO:0006221 (0%)" "GO:0005829 (20.7%) GO:0005737 (0%)" "GO:0005524 (20.7%) GO:0033862 (20.7%) GO:0016301 (0.1%)" "UDP biosynthetic process (20.7%) 'de novo' CTP biosynthetic process (17.1%) pyrimidine nucleotide biosynthetic process (0%)" "cytosol (20.7%) cytoplasm (0%)" "ATP binding (20.7%) UMP kinase activity (20.7%) kinase activity (0.1%)" "IPR036393 (29.8%) IPR001048 (29.6%) IPR015963 (24.6%)" "Acetylglutamate kinase-like superfamily (29.8%) Aspartate/glutamate/uridylate kinase (29.6%) Uridylate kinase, bacteria (24.6%)" MNIRPLHDR root "GO:0051085 (1.3%) GO:0051301 (0.1%) GO:0006457 (0%)" "GO:0005737 (16.1%) GO:0005829 (0%) GO:1990220 (0%)" "GO:0005524 (16.5%) GO:0044183 (16.5%) GO:0046872 (16.5%)" "obsolete chaperone cofactor-dependent protein refolding (1.3%) cell division (0.1%) protein folding (0%)" "cytoplasm (16.1%) cytosol (0%) GroEL-GroES complex (0%)" "ATP binding (16.5%) protein folding chaperone (16.5%) metal ion binding (16.5%)" "IPR020818 (25.1%) IPR011032 (25%) IPR037124 (25%)" "GroES chaperonin family (25.1%) GroES-like superfamily (25%) GroES chaperonin superfamily (25%)" DMQDTFFIQHNPDVLLR Bacteria Bacteria 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004826 (16.7%) GO:0005524 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) phenylalanine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002319 (14.4%) IPR004188 (14.4%) IPR006195 (14.4%)" "Phenylalanyl-tRNA synthetase (14.4%) Phenylalanine-tRNA ligase, class II, N-terminal (14.4%) Aminoacyl-tRNA synthetase, class II (14.4%)" GVKLDNELDVEDLKTLVSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" ESELEGELVAGPNNFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0019867 (50%) GO:2001070 (50%) outer membrane (50%) starch binding (50%) "IPR025970 (51.1%) IPR032187 (48.9%)" "SusE outer membrane protein (51.1%) Outer membrane protein SusF/SusE-like, C-terminal (48.9%)" VAVIGSGPAGIACAGDLAK Clostridia Bacteria Bacillati Bacillota Clostridia "1.4.1.13 (86.4%) 1.18.1.2 (4.5%) 1.4.1.14 (4.5%)" "glutamate synthase (NADPH) (86.4%) ferredoxin--NADP(+) reductase (4.5%) glutamate synthase (NADH) (4.5%)" "GO:0051536 (50%) GO:0004355 (23.5%) GO:0016491 (23.5%)" "iron-sulfur cluster binding (50%) glutamate synthase (NADPH) activity (23.5%) oxidoreductase activity (23.5%)" "IPR006004 (19.3%) IPR009051 (19.3%) IPR023753 (19.3%)" "Sulfide dehydrogenase subunit alpha-like (19.3%) Alpha-helical ferredoxin (19.3%) FAD/NAD(P)-binding domain (19.3%)" KLLPSLFELYVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.49 (100%) glucose-6-phosphate dehydrogenase (NADP(+)) (100%) "GO:0006006 (20%) GO:0009051 (20%)" GO:0005829 (20%) "GO:0004345 (20%) GO:0050661 (20%)" "glucose metabolic process (20%) pentose-phosphate shunt, oxidative branch (20%)" cytosol (20%) "glucose-6-phosphate dehydrogenase activity (20%) NADP binding (20%)" "IPR001282 (20%) IPR019796 (20%) IPR022674 (20%)" "Glucose-6-phosphate dehydrogenase (20%) Glucose-6-phosphate dehydrogenase, active site (20%) Glucose-6-phosphate dehydrogenase, NAD-binding (20%)" KGELTVEQGK Bacillati Bacteria Bacillati IPR008769 (100%) Poly granule associated (100%) FAELFETVFDEICDIK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae "4.1.2.- (42.1%) 4.1.2.22 (36.8%) 4.1.2.9 (21.1%)" "Aldehyde-lyases (42.1%) fructose-6-phosphate phosphoketolase (36.8%) phosphoketolase (21.1%)" GO:0005975 (32.6%) "GO:0000287 (32.6%) GO:0016832 (26.5%) GO:0047905 (5.3%)" carbohydrate metabolic process (32.6%) "magnesium ion binding (32.6%) aldehyde-lyase activity (26.5%) fructose-6-phosphate phosphoketolase activity (5.3%)" "IPR005593 (14.1%) IPR018970 (14.1%) IPR019789 (14.1%)" "Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase (14.1%) Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal (14.1%) Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site (14.1%)" RGDAAPAAIIELVTEPVSPK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.3%) IPR036373 (33.3%) IPR047859 (33.3%)" "Large ribosomal subunit protein bL17 (33.3%) Large ribosomal subunit protein bL17 superfamily (33.3%) Large ribosomal subunit protein bL17, conserved site (33.3%)" LAAGTYFVSGDSKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) RAVCENMEYMGMK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" STPVAGESAFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.262 (100%) 4-hydroxythreonine-4-phosphate dehydrogenase (100%) "GO:0046872 (33.3%) GO:0051287 (33.3%) GO:0016491 (19%)" "metal ion binding (33.3%) NAD binding (33.3%) oxidoreductase activity (19%)" IPR005255 (100%) PdxA family (100%) KHNYAIVDEVDSVLIDDAR Bacteroidota Bacteria Pseudomonadati Bacteroidota 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.7%) GO:0017038 (11.7%) GO:0043952 (11.7%)" "GO:0005829 (11.7%) GO:0005886 (11.7%) GO:0031522 (11.7%)" "GO:0005524 (11.7%) GO:0046872 (6%) GO:0008564 (0.1%)" "protein targeting (11.7%) protein import (11.7%) protein transport by the Sec complex (11.7%)" "cytosol (11.7%) plasma membrane (11.7%) cell envelope Sec protein transport complex (11.7%)" "ATP binding (11.7%) metal ion binding (6%) protein-exporting ATPase activity (0.1%)" "IPR000185 (8.1%) IPR011115 (8.1%) IPR014001 (8.1%)" "Protein translocase subunit SecA (8.1%) SecA DEAD-like, N-terminal (8.1%) Helicase superfamily 1/2, ATP-binding domain (8.1%)" FANDLEEYAKVEQMPLLEGKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (19.8%) "GO:0005829 (19.8%) GO:0016020 (19.8%)" "GO:0003743 (20.7%) GO:0043022 (19.8%)" ribosome disassembly (19.8%) "cytosol (19.8%) membrane (19.8%)" "translation initiation factor activity (20.7%) ribosome binding (19.8%)" "IPR001288 (16.8%) IPR019813 (16.8%) IPR019814 (16.8%)" "Translation initiation factor 3 (16.8%) Translation initiation factor 3, conserved site (16.8%) Translation initiation factor 3, N-terminal (16.8%)" IADQLIVGGGIANTFIAAQGHDVGK root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.5%) GO:0006094 (16.3%) GO:0008615 (0.2%)" "GO:0005829 (16.3%) GO:0005737 (0.2%)" "GO:0004618 (16.5%) GO:0005524 (16.5%) GO:0043531 (16.3%)" "glycolytic process (16.5%) gluconeogenesis (16.3%) pyridoxine biosynthetic process (0.2%)" "cytosol (16.3%) cytoplasm (0.2%)" "phosphoglycerate kinase activity (16.5%) ATP binding (16.5%) ADP binding (16.3%)" "IPR001576 (25.1%) IPR015824 (25.1%) IPR036043 (25.1%)" "Phosphoglycerate kinase (25.1%) Phosphoglycerate kinase, N-terminal (25.1%) Phosphoglycerate kinase superfamily (25.1%)" QATKEAGQIAGLEVK Pseudomonadati Bacteria Pseudomonadati "GO:0042026 (0.1%) GO:0051085 (0.1%)" GO:0005737 (6.6%) "GO:0005524 (30.9%) GO:0051082 (30.9%) GO:0140662 (30.9%)" "protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" cytoplasm (6.6%) "ATP binding (30.9%) unfolded protein binding (30.9%) ATP-dependent protein folding chaperone (30.9%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" LLAIAELGWSKPEQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) "GO:0005975 (25%) GO:0030203 (25%)" GO:0016020 (25%) GO:0004563 (25%) "carbohydrate metabolic process (25%) glycosaminoglycan metabolic process (25%)" membrane (25%) beta-N-acetylhexosaminidase activity (25%) "IPR015883 (12.8%) IPR017853 (12.8%) IPR025705 (12.8%)" "Glycoside hydrolase family 20, catalytic domain (12.8%) Glycoside hydrolase superfamily (12.8%) Beta-hexosaminidase (12.8%)" NAMGVGIPGTGMVGLPIAIALGSIIGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0019450 (50%) GO:0080146 (50%) L-cysteine catabolic process to pyruvate (50%) L-cysteine desulfhydrase activity (50%) "IPR005130 (50%) IPR021144 (50%)" "Serine dehydratase-like, alpha subunit (50%) Uncharacterised protein family UPF0597 (50%)" IGNSIVEDDKLDLALDIIAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.4%) GO:0006096 (16.4%)" GO:0005829 (16.4%) "GO:0004618 (16.4%) GO:0005524 (16.4%) GO:0043531 (16.4%)" "gluconeogenesis (16.4%) glycolytic process (16.4%)" cytosol (16.4%) "phosphoglycerate kinase activity (16.4%) ATP binding (16.4%) ADP binding (16.4%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" GWDQTVPGHNVGSR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0003755 (99.2%) GO:0016853 (0.8%)" "peptidyl-prolyl cis-trans isomerase activity (99.2%) isomerase activity (0.8%)" "IPR001179 (41.5%) IPR046357 (41.5%) IPR044609 (16.7%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (41.5%) Peptidyl-prolyl cis-trans isomerase domain superfamily (41.5%) Peptidyl-prolyl cis-trans isomerase FKBP2/11 (16.7%)" LAEGEEFTVGQSISVELFADVK root "GO:0006412 (24.2%) GO:0000027 (0.2%) GO:0002181 (0.2%)" "GO:0022625 (24.4%) GO:0005840 (1.7%) GO:0005737 (0.2%)" "GO:0003735 (24.4%) GO:0019843 (24.4%)" "translation (24.2%) ribosomal large subunit assembly (0.2%) cytoplasmic translation (0.2%)" "cytosolic large ribosomal subunit (24.4%) ribosome (1.7%) cytoplasm (0.2%)" "structural constituent of ribosome (24.4%) rRNA binding (24.4%)" "IPR009000 (24.7%) IPR019927 (24.7%) IPR000597 (24.4%)" "Translation protein, beta-barrel domain superfamily (24.7%) Large ribosomal subunit protein uL3, bacteria/organella (24.7%) Large ribosomal subunit protein uL3 (24.4%)" INAVITGVGGYVPDYVLTNEEISR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) "GO:0044550 (20.5%) GO:0006633 (19.9%)" GO:0005737 (19.9%) "GO:0004315 (19.9%) GO:0033818 (19.2%) GO:0016746 (0.7%)" "secondary metabolite biosynthetic process (20.5%) fatty acid biosynthetic process (19.9%)" cytoplasm (19.9%) "3-oxoacyl-[acyl-carrier-protein] synthase activity (19.9%) beta-ketoacyl-acyl-carrier-protein synthase III activity (19.2%) acyltransferase activity (0.7%)" "IPR016039 (25.6%) IPR004655 (24.8%) IPR013747 (24.8%)" "Thiolase-like (25.6%) Beta-ketoacyl-[acyl-carrier-protein] synthase III (24.8%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (24.8%)" GYGYEWYAPNIGIVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0046872 (100%) metal ion binding (100%) IPR049279 (100%) DUF3108-like (100%) MKDEATANAEADRKEK Odoribacter laneus YIT 12061 Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacter Odoribacter laneus Odoribacter laneus YIT 12061 "GO:0005524 (33.3%) GO:0051082 (33.3%) GO:0140662 (33.3%)" "ATP binding (33.3%) unfolded protein binding (33.3%) ATP-dependent protein folding chaperone (33.3%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" LAQWKEEGKYVGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" VYRPSHADYTYTVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.3.5 (100%) chorismate synthase (100%) "GO:0008652 (16.7%) GO:0009073 (16.7%) GO:0009423 (16.7%)" GO:0005829 (16.7%) "GO:0004107 (16.7%) GO:0010181 (16.7%)" "amino acid biosynthetic process (16.7%) aromatic amino acid family biosynthetic process (16.7%) chorismate biosynthetic process (16.7%)" cytosol (16.7%) "chorismate synthase activity (16.7%) FMN binding (16.7%)" "IPR000453 (33.3%) IPR020541 (33.3%) IPR035904 (33.3%)" "Chorismate synthase (33.3%) Chorismate synthase, conserved site (33.3%) Chorismate synthase AroC superfamily (33.3%)" AVNAGGVATSGLEMTQNAMHISWTAAEVDAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.4.1.- (50%) 1.4.1.4 (50%)" "With NAD(+) or NADP(+) as acceptor (50%) glutamate dehydrogenase (NADP(+)) (50%)" GO:0006537 (26.4%) GO:0005829 (24.5%) "GO:0004354 (26.4%) GO:0000166 (22.6%)" glutamate biosynthetic process (26.4%) cytosol (24.5%) "glutamate dehydrogenase (NADP+) activity (26.4%) nucleotide binding (22.6%)" "IPR006096 (13.1%) IPR036291 (13.1%) IPR050724 (13.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (13.1%) NAD(P)-binding domain superfamily (13.1%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (13.1%)" RFENKPVVTEAVESVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.3.3 (100%) methylglyoxal synthase (100%) GO:0019242 (33.3%) GO:0005829 (33.3%) GO:0008929 (33.3%) methylglyoxal biosynthetic process (33.3%) cytosol (33.3%) methylglyoxal synthase activity (33.3%) "IPR004363 (25%) IPR011607 (25%) IPR018148 (25%)" "Methylglyoxal synthase (25%) Methylglyoxal synthase-like domain (25%) Methylglyoxal synthase, active site (25%)" VEQFDKGLEIIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" VQTYLFNYLHGLAENK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) QDAIGTPYCITVDHDTLKDNCVTIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.5%) GO:0015966 (12.5%)" "GO:0005737 (12.5%) GO:0070062 (12.5%) GO:1990742 (12.5%)" "GO:0004081 (12.5%) GO:0004820 (12.5%) GO:0005524 (12.5%)" "glycyl-tRNA aminoacylation (12.5%) diadenosine tetraphosphate biosynthetic process (12.5%)" "cytoplasm (12.5%) extracellular exosome (12.5%) microvesicle (12.5%)" "bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.5%) glycine-tRNA ligase activity (12.5%) ATP binding (12.5%)" "IPR002314 (11.1%) IPR002315 (11.1%) IPR004154 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Glycyl-tRNA synthetase (11.1%) Anticodon-binding (11.1%)" KQNLESFFPEIPVEFHINK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.5.2.17 (100%) hydroxyisourate hydrolase (100%) "GO:0006144 (33.1%) GO:0051289 (0.3%)" "GO:0042597 (32.4%) GO:0032991 (0.3%)" "GO:0033971 (32.8%) GO:0016787 (0.7%) GO:0042802 (0.3%)" "purine nucleobase metabolic process (33.1%) protein homotetramerization (0.3%)" "periplasmic space (32.4%) protein-containing complex (0.3%)" "hydroxyisourate hydrolase activity (32.8%) hydrolase activity (0.7%) identical protein binding (0.3%)" "IPR023416 (16.9%) IPR036817 (16.9%) IPR014306 (16.8%)" "Transthyretin/hydroxyisourate hydrolase domain (16.9%) Transthyretin/hydroxyisourate hydrolase domain superfamily (16.9%) Hydroxyisourate hydrolase (16.8%)" VLNGLGIAVISTSK Bacteria Bacteria GO:0006412 (16.7%) "GO:0005840 (16.7%) GO:1990904 (16.7%) GO:0005737 (16.5%)" "GO:0003735 (16.7%) GO:0019843 (16.5%)" translation (16.7%) "ribosome (16.7%) ribonucleoprotein complex (16.7%) cytoplasm (16.5%)" "structural constituent of ribosome (16.7%) rRNA binding (16.5%)" "IPR000630 (34%) IPR035987 (34%) IPR047863 (32.1%)" "Small ribosomal subunit protein uS8 (34%) Small ribosomal subunit protein uS8 superfamily (34%) Small ribosomal subunit protein uS8, conserved site (32.1%)" RETLEDAVKHPEKYPQLTIR root 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (5.6%) GO:0006950 (0.1%)" "GO:0005829 (39.6%) GO:0005737 (0.1%)" "GO:0008861 (48.5%) GO:0016829 (6%) GO:0016746 (0.2%)" "glucose metabolic process (5.6%) response to stress (0.1%)" "cytosol (39.6%) cytoplasm (0.1%)" "formate C-acetyltransferase activity (48.5%) lyase activity (6%) acyltransferase activity (0.2%)" "IPR001150 (24.4%) IPR050244 (24.4%) IPR019777 (24.3%)" "Glycine radical domain (24.4%) Autonomous Glycyl Radical Cofactor (24.4%) Formate C-acetyltransferase glycine radical, conserved site (24.3%)" TSIFVGTDKEMIEYAAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.6.99.2 (100%) pyridoxine 5'-phosphate synthase (100%) GO:0008615 (33.3%) GO:0005829 (33.3%) GO:0033856 (33.3%) pyridoxine biosynthetic process (33.3%) cytosol (33.3%) pyridoxine 5'-phosphate synthase activity (33.3%) "IPR004569 (34.6%) IPR013785 (32.7%) IPR036130 (32.7%)" "Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ (34.6%) Aldolase-type TIM barrel (32.7%) Pyridoxine 5'-phosphate synthase (32.7%)" NLPQWHIPIELR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.99.5 (93.9%) 2.5.1.54 (6.1%)" "chorismate mutase (93.9%) 3-deoxy-7-phosphoheptulonate synthase (6.1%)" GO:0046417 (45.7%) "GO:0004106 (45.7%) GO:0003849 (8.5%)" chorismate metabolic process (45.7%) "chorismate mutase activity (45.7%) 3-deoxy-7-phosphoheptulonate synthase activity (8.5%)" "IPR006218 (16.7%) IPR013785 (16.7%) IPR052899 (16.7%)" "DAHP synthetase I/KDSA (16.7%) Aldolase-type TIM barrel (16.7%) Class-I DAHP synthase (16.7%)" ISLVGFGTFSVAER Pseudomonadati Bacteria Pseudomonadati "GO:0030261 (23.2%) GO:0006270 (1.4%) GO:0006351 (1.4%)" "GO:0005829 (23.2%) GO:1990103 (1.4%) GO:1990178 (1.4%)" "GO:0003677 (23.2%) GO:0030527 (23.2%) GO:0042802 (1.4%)" "chromosome condensation (23.2%) DNA replication initiation (1.4%) DNA-templated transcription (1.4%)" "cytosol (23.2%) DnaA-HU complex (1.4%) HU-DNA complex (1.4%)" "DNA binding (23.2%) structural constituent of chromatin (23.2%) identical protein binding (1.4%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" TEHLYNAMLDEFKK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "IPR005587 (50%) IPR023146 (50%)" "Uncharacterised protein family UPF0304, YfbU (50%) YfbU, alpha-helical bundle domain superfamily (50%)" GGKKEEESGMVTGPVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" HPGEKEYLQAVK Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.4.1.4 (85.7%) 1.4.1.2 (14.3%)" "glutamate dehydrogenase (NADP(+)) (85.7%) glutamate dehydrogenase (14.3%)" GO:0006537 (25.5%) "GO:0005829 (25%) GO:0009986 (0.5%)" "GO:0004354 (25.5%) GO:0000166 (23%) GO:0004352 (0.5%)" glutamate biosynthetic process (25.5%) "cytosol (25%) cell surface (0.5%)" "glutamate dehydrogenase (NADP+) activity (25.5%) nucleotide binding (23%) glutamate dehydrogenase (NAD+) activity (0.5%)" "IPR006097 (12.4%) IPR046346 (12.4%) IPR050724 (12.4%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.4%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (12.4%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (12.4%)" AQTDIQAMQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" AEGICHPILLGNDER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (17.4%) "GO:0016746 (17.4%) GO:0046872 (17.4%) GO:0051287 (17.4%)" malate metabolic process (17.4%) "acyltransferase activity (17.4%) metal ion binding (17.4%) NAD binding (17.4%)" "IPR002505 (9.1%) IPR012188 (9.1%) IPR012301 (9.1%)" "Phosphate acetyl/butaryl transferase (9.1%) NAD(P)-dependent malic enzyme (9.1%) Malic enzyme, N-terminal domain (9.1%)" AGWDTHGLPVEIGVEK root 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.4%) GO:0005737 (14.2%) "GO:0004822 (14.4%) GO:0005524 (14.4%) GO:0002161 (14.2%)" isoleucyl-tRNA aminoacylation (14.4%) cytoplasm (14.2%) "isoleucine-tRNA ligase activity (14.4%) ATP binding (14.4%) aminoacyl-tRNA deacylase activity (14.2%)" "IPR002300 (12.1%) IPR023586 (12.1%) IPR014729 (12%)" "Aminoacyl-tRNA synthetase, class Ia (12.1%) Isoleucine-tRNA ligase, type 2 (12.1%) Rossmann-like alpha/beta/alpha sandwich fold (12%)" MKLDIPQVPELLIDNTDR IQSDLVDLLEGVAEGNLAGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0006189 (20%) GO:0009113 (20%)" "GO:0004637 (20%) GO:0005524 (20%) GO:0046872 (20%)" "'de novo' IMP biosynthetic process (20%) purine nucleobase biosynthetic process (20%)" "phosphoribosylamine-glycine ligase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000115 (11.1%) IPR011054 (11.1%) IPR011761 (11.1%)" "Phosphoribosylglycinamide synthetase (11.1%) Rudiment single hybrid motif (11.1%) ATP-grasp fold (11.1%)" GALDDEQLKESIRDAHFIGLR root "1.1.1.95 (52.7%) 1.1.1.399 (47.3%)" "phosphoglycerate dehydrogenase (52.7%) 2-oxoglutarate reductase (47.3%)" "GO:0006564 (17.6%) GO:0009070 (1.4%)" GO:0005829 (18.6%) "GO:0051287 (21%) GO:0004617 (20.2%) GO:0047545 (18.4%)" "L-serine biosynthetic process (17.6%) serine family amino acid biosynthetic process (1.4%)" cytosol (18.6%) "NAD binding (21%) phosphoglycerate dehydrogenase activity (20.2%) (S)-2-hydroxyglutarate dehydrogenase activity (18.4%)" "IPR006139 (12.1%) IPR050223 (11.4%) IPR029752 (11.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (12.1%) D-isomer specific 2-hydroxyacid dehydrogenase (11.4%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 (11.3%)" FFEQDSLTEDEMREGIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.-.- (100%) Acting on acid anhydrides (100%) GO:0032790 (25%) "GO:0003746 (25.4%) GO:0005525 (25%) GO:0003924 (24.3%)" ribosome disassembly (25%) "translation elongation factor activity (25.4%) GTP binding (25%) GTPase activity (24.3%)" "IPR027417 (7.8%) IPR009000 (7.6%) IPR035647 (7.6%)" "P-loop containing nucleoside triphosphate hydrolase (7.8%) Translation protein, beta-barrel domain superfamily (7.6%) EF-G domain III/V-like (7.6%)" IDLEGQPIIDAVAENVGDTTR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.5.1.108 (50%) 4.2.1.59 (50%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase (50%) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (50%)" "GO:0006633 (14.3%) GO:0009245 (14.3%)" "GO:0005737 (14.3%) GO:0016020 (14.3%)" "GO:0046872 (14.3%) GO:0103117 (14.3%) GO:0019171 (12.3%)" "fatty acid biosynthetic process (14.3%) lipid A biosynthetic process (14.3%)" "cytoplasm (14.3%) membrane (14.3%)" "metal ion binding (14.3%) UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.3%) (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (12.3%)" "IPR004463 (14.3%) IPR010084 (14.3%) IPR011334 (14.3%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.3%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (14.3%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.3%)" YASEVTDVPIINAGDGANQHPSQTMLDLYSIRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006207 (16.7%) GO:0006520 (16.7%) GO:0044205 (16.7%)" GO:0005829 (16.7%) "GO:0004070 (16.7%) GO:0016597 (16.7%)" "'de novo' pyrimidine nucleobase biosynthetic process (16.7%) amino acid metabolic process (16.7%) 'de novo' UMP biosynthetic process (16.7%)" cytosol (16.7%) "aspartate carbamoyltransferase activity (16.7%) amino acid binding (16.7%)" "IPR002082 (20%) IPR006130 (20%) IPR006131 (20%)" "Aspartate carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%)" TLITTALPYANGPVHIGHLAGVYVPADIYAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004825 (16.7%) GO:0005524 (16.7%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) methionine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR001412 (8.3%) IPR002547 (8.3%) IPR004495 (8.3%)" "Aminoacyl-tRNA synthetase, class I, conserved site (8.3%) tRNA-binding domain (8.3%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.3%)" QVPCVDDLNDVGHGVNLVR Bacteria Bacteria 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0000166 (25%) GO:0047850 (25%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "nucleotide binding (25%) diaminopimelate dehydrogenase activity (25%)" "IPR000683 (25%) IPR010190 (25%) IPR032094 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Diaminopimelate dehydrogenase, Ddh (25%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25%)" IVPNLEALGVFTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (33.3%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (33.3%)" "IPR003741 (13%) IPR004452 (13%) IPR009051 (13%)" "LUD domain (13%) L-lactate oxidation iron-sulfur protein LutB/LldF (13%) Alpha-helical ferredoxin (13%)" YTEAKGDDAKYLGAGAAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) TQKEDAIVEKEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" ANEAYLQGQLGNPK Pseudomonadati Bacteria Pseudomonadati "4.1.2.13 (99.5%) 4.1.2.- (0.5%)" "fructose-bisphosphate aldolase (99.5%) Aldehyde-lyases (0.5%)" "GO:0006094 (19.8%) GO:0006096 (19.8%)" GO:0005829 (19.8%) "GO:0004332 (19.8%) GO:0008270 (19.8%) GO:0016829 (0.5%)" "gluconeogenesis (19.8%) glycolytic process (19.8%)" cytosol (19.8%) "fructose-bisphosphate aldolase activity (19.8%) zinc ion binding (19.8%) lyase activity (0.5%)" "IPR006411 (33.4%) IPR013785 (33.4%) IPR000771 (33.2%)" "Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype (33.4%) Aldolase-type TIM barrel (33.4%) Fructose-bisphosphate aldolase, class-II (33.2%)" KEVDYIFDIDDPMLGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0009117 (50%) GO:0003824 (50%) nucleotide metabolic process (50%) catalytic activity (50%) "IPR001310 (33.3%) IPR011146 (33.3%) IPR036265 (33.3%)" "Histidine triad (HIT) protein (33.3%) HIT-like domain (33.3%) HIT-like superfamily (33.3%)" ITTVCSTHGPVWTEEIPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.6.3.- (50%) 1.6.3.4 (25%) 2.5.1.26 (25%)" "With oxygen as acceptor (50%) NADH oxidase (H2O-forming) (25%) alkylglycerone-phosphate synthase (25%)" "GO:0009055 (24.2%) GO:0010181 (24.2%) GO:0016491 (24.2%)" "electron transfer activity (24.2%) FMN binding (24.2%) oxidoreductase activity (24.2%)" "IPR001279 (14.3%) IPR008254 (14.3%) IPR016440 (14.3%)" "Metallo-beta-lactamase (14.3%) Flavodoxin/nitric oxide synthase (14.3%) Rubredoxin-oxygen oxidoreductase (14.3%)" GGKKDNFATVKDNER root NEQIAALKELR Pseudomonadati Bacteria Pseudomonadati 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (19.4%) GO:0005737 (19.4%) "GO:0004494 (19.4%) GO:0031419 (19.4%) GO:0046872 (19.4%)" propionate metabolic process, methylmalonyl pathway (19.4%) cytoplasm (19.4%) "methylmalonyl-CoA mutase activity (19.4%) cobalamin binding (19.4%) metal ion binding (19.4%)" "IPR006098 (15.4%) IPR006099 (15.4%) IPR006158 (15.4%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (15.4%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (15.4%) Cobalamin (vitamin B12)-binding domain (15.4%)" AIAQVGTISANSDETVGK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (18.2%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (15.4%) GO:1990220 (0%) GO:0005829 (0%)" "GO:0140662 (18.2%) GO:0005524 (18.1%) GO:0016853 (17.9%)" "protein refolding (18.2%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (15.4%) GroEL-GroES complex (0%) cytosol (0%)" "ATP-dependent protein folding chaperone (18.2%) ATP binding (18.1%) isomerase activity (17.9%)" "IPR001844 (17.5%) IPR027413 (17.5%) IPR002423 (17.4%)" "Chaperonin Cpn60/GroEL (17.5%) GroEL-like equatorial domain superfamily (17.5%) Chaperonin Cpn60/GroEL/TCP-1 family (17.4%)" TGTVTPVANLEPVLLAGTVVKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.5.1.2 (100%) DNA ligase (NAD(+)) (100%) "GO:0006260 (20%) GO:0006281 (20%)" GO:0005829 (20%) "GO:0003911 (20%) GO:0046872 (20%)" "DNA replication (20%) DNA repair (20%)" cytosol (20%) "DNA ligase (NAD+) activity (20%) metal ion binding (20%)" "IPR001357 (9.1%) IPR001679 (9.1%) IPR004149 (9.1%)" "BRCT domain (9.1%) NAD-dependent DNA ligase (9.1%) Zinc-finger, NAD-dependent DNA ligase C4-type (9.1%)" MGNAGEHIDYALLLDGLKAER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.4 (100%) sulfate adenylyltransferase (100%) "GO:0000103 (16.5%) GO:0070814 (16.5%)" "GO:0003924 (17%) GO:0005525 (17%) GO:0004781 (16.5%)" "sulfate assimilation (16.5%) hydrogen sulfide biosynthetic process (16.5%)" "GTPase activity (17%) GTP binding (17%) sulfate adenylyltransferase (ATP) activity (16.5%)" "IPR000795 (9.3%) IPR027417 (9.3%) IPR031157 (9.3%)" "Translational (tr)-type GTP-binding domain (9.3%) P-loop containing nucleoside triphosphate hydrolase (9.3%) Tr-type G domain, conserved site (9.3%)" NNEIPAVLYGGEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" FTTAPGAHVICANK Clostridia Bacteria Bacillati Bacillota Clostridia 4.1.1.22 (100%) histidine decarboxylase (100%) GO:0006547 (50%) GO:0004398 (50%) L-histidine metabolic process (50%) histidine decarboxylase activity (50%) "IPR003427 (25%) IPR016104 (25%) IPR016105 (25%)" "Histidine decarboxylase proenzyme (25%) Pyruvoyl-dependent histidine/arginine decarboxylase (25%) Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain (25%)" SAPEVNMNLGLIALAKGDK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" QINEEIIRDTIHAGAPFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR005886 (33.3%) IPR036291 (33.3%) IPR001509 (18.5%)" "UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD-dependent epimerase/dehydratase (18.5%)" GIIDAILDGSINEAPTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.2%) GO:0005829 (18.2%) "GO:0004612 (18.2%) GO:0005524 (18.2%) GO:0046872 (18.2%)" gluconeogenesis (18.2%) cytosol (18.2%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.2%) ATP binding (18.2%) metal ion binding (18.2%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" NAPHPEYEVTADEWK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" MEVNVYNIKGEDTGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0005840 (20.6%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (18.2%) GO:0003723 (1.4%)" translation (20%) "ribosome (20.6%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (18.2%) RNA binding (1.4%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" YFYPQLDKEGLIIDDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.21.- (100%) Serine endopeptidases (100%) GO:0006508 (33.1%) GO:0005737 (33.1%) "GO:0008236 (33.1%) GO:0003743 (0.6%)" proteolysis (33.1%) cytoplasm (33.1%) "serine-type peptidase activity (33.1%) translation initiation factor activity (0.6%)" "IPR005151 (12.5%) IPR012393 (12.5%) IPR029045 (12.5%)" "Tail specific protease (12.5%) Tricorn protease (12.5%) ClpP/crotonase-like domain superfamily (12.5%)" NGESPMPVIAATSPTNCFDAAYMAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.2.-.- (100%) Acting on the aldehyde or oxo group of donors (100%) GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.5%) IPR002880 (12.5%) IPR009014 (12.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" FFNAYGEPIDGGPIPEGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0046034 (33.3%) GO:1902600 (33.3%)" GO:0005524 (33.3%) "ATP metabolic process (33.3%) proton transmembrane transport (33.3%)" ATP binding (33.3%) "IPR000194 (20%) IPR004100 (20%) IPR022879 (20%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (20%) V-type ATP synthase regulatory subunit B/beta (20%)" AVIPVAGLGMHMLPATK root "2.7.7.9 (99.9%) 2.7.7.- (0.1%)" "UTP--glucose-1-phosphate uridylyltransferase (99.9%) Nucleotidyltransferases (0.1%)" "GO:0006011 (22.3%) GO:0009103 (18.1%) GO:0045227 (0%)" GO:0005829 (18.8%) "GO:0003983 (22.4%) GO:0030234 (18.1%) GO:0016779 (0.2%)" "UDP-alpha-D-glucose metabolic process (22.3%) lipopolysaccharide biosynthetic process (18.1%) capsule polysaccharide biosynthetic process (0%)" cytosol (18.8%) "UTP:glucose-1-phosphate uridylyltransferase activity (22.4%) enzyme regulator activity (18.1%) nucleotidyltransferase activity (0.2%)" "IPR029044 (26.3%) IPR005771 (26.2%) IPR005835 (26.2%)" "Nucleotide-diphospho-sugar transferases (26.3%) UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type (26.2%) Nucleotidyl transferase domain (26.2%)" EQLLEELNGVVGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR024623 (100%) Uncharacterised protein family YtxH (100%) SGDAANAAALR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) RLDFMMQEFNR root "3.1.-.- (96.2%) 3.1.26.- (1.1%) 3.6.3.12 (1.1%)" "Acting on ester bonds (96.2%) Endoribonucleases producing 5'-phosphomonoesters (1.1%) Transferred entry: 7.2.2.6 (1.1%)" GO:0006401 (0.1%) GO:0005829 (0%) "GO:0004521 (50.6%) GO:0016787 (49%) GO:0016891 (0.1%)" RNA catabolic process (0.1%) cytosol (0%) "RNA endonuclease activity (50.6%) hydrolase activity (49%) RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism (0.1%)" "IPR005229 (33.7%) IPR013551 (33.7%) IPR013527 (32.6%)" "Endoribonuclease YicC/YloC-like (33.7%) Endoribonuclease YicC-like, C-terminal (33.7%) Endoribonuclease YicC-like, N-terminal (32.6%)" LLPPLCLTMDEAKEFIRR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.- (100%) Transaminases (100%) "GO:0008483 (33.3%) GO:0030170 (33.3%) GO:0042802 (33.3%)" "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%) identical protein binding (33.3%)" "IPR005814 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class-III (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" NYAVSQQPSTGQYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.1.31 (100%) 6-phosphogluconolactonase (100%) "GO:0005975 (33.3%) GO:0006098 (33.3%)" GO:0017057 (33.3%) "carbohydrate metabolic process (33.3%) pentose-phosphate shunt (33.3%)" 6-phosphogluconolactonase activity (33.3%) "IPR005900 (25%) IPR006148 (25%) IPR037171 (25%)" "6-phosphogluconolactonase, DevB-type (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) NagB/RpiA transferase-like (25%)" QQIEEATSDYDREK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (16.7%) GO:1990220 (0%) GO:0005829 (0%)" "GO:0140662 (17%) GO:0005524 (16.9%) GO:0016853 (16.9%)" "protein refolding (17%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (16.7%) GroEL-GroES complex (0%) cytosol (0%)" "ATP-dependent protein folding chaperone (17%) ATP binding (16.9%) isomerase activity (16.9%)" "IPR001844 (17%) IPR027409 (17%) IPR002423 (16.7%)" "Chaperonin Cpn60/GroEL (17%) GroEL-like apical domain superfamily (17%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%)" GLRDFDEQTAYEAMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.2%) GO:0006516 (19.2%)" GO:0005829 (19.2%) "GO:0000224 (19.2%) GO:0030246 (19.2%) GO:0016798 (4.1%)" "carbohydrate metabolic process (19.2%) glycoprotein catabolic process (19.2%)" cytosol (19.2%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.2%) carbohydrate binding (19.2%) hydrolase activity, acting on glycosyl bonds (4.1%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" RIEELTGVPIDIISTGPDRTETMILRDPFDA root 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.6%) GO:0046040 (16.6%) GO:0006164 (0.1%)" "GO:0005737 (16.6%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0004019 (16.7%) GO:0005525 (16.6%) GO:0000287 (16.3%)" "'de novo' AMP biosynthetic process (16.6%) IMP metabolic process (16.6%) purine nucleotide biosynthetic process (0.1%)" "cytoplasm (16.6%) cytosol (0%) membrane (0%)" "adenylosuccinate synthase activity (16.7%) GTP binding (16.6%) magnesium ion binding (16.3%)" "IPR001114 (14.7%) IPR027417 (14.6%) IPR042111 (14.6%)" "Adenylosuccinate synthetase (14.7%) P-loop containing nucleoside triphosphate hydrolase (14.6%) Adenylosuccinate synthetase, domain 3 (14.6%)" LPGFPIVLHGSSSVPEEEVETINKFGGALK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (25%) GO:0030388 (25%)" "GO:0004332 (25%) GO:0008270 (25%)" "glycolytic process (25%) fructose 1,6-bisphosphate metabolic process (25%)" "fructose-bisphosphate aldolase activity (25%) zinc ion binding (25%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" KVLESAIANAEHNDGADIDDLK root "GO:0006412 (24.8%) GO:0002181 (0.1%) GO:0046677 (0.1%)" "GO:0022625 (24.7%) GO:0005840 (0.4%) GO:0015934 (0.1%)" "GO:0003735 (24.8%) GO:0019843 (24.8%) GO:0003729 (0.1%)" "translation (24.8%) cytoplasmic translation (0.1%) response to antibiotic (0.1%)" "cytosolic large ribosomal subunit (24.7%) ribosome (0.4%) large ribosomal subunit (0.1%)" "structural constituent of ribosome (24.8%) rRNA binding (24.8%) mRNA binding (0.1%)" "IPR001063 (19.8%) IPR005727 (19.8%) IPR036394 (19.8%)" "Large ribosomal subunit protein uL22 (19.8%) Large ribosomal subunit protein uL22, bacterial/chloroplast-type (19.8%) Ribosomal protein uL22 superfamily (19.8%)" KLNAPVSEEAIEGVDKYWR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae "4.1.2.- (51.4%) 4.1.2.22 (32.4%) 4.1.2.9 (16.2%)" "Aldehyde-lyases (51.4%) fructose-6-phosphate phosphoketolase (32.4%) phosphoketolase (16.2%)" GO:0005975 (32.5%) "GO:0000287 (32.1%) GO:0016832 (26.4%) GO:0047905 (5.7%)" carbohydrate metabolic process (32.5%) "magnesium ion binding (32.1%) aldehyde-lyase activity (26.4%) fructose-6-phosphate phosphoketolase activity (5.7%)" "IPR005593 (13.8%) IPR018969 (13.8%) IPR018970 (13.8%)" "Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase (13.8%) Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal (13.8%) Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal (13.8%)" EANTEKYMER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" FGGTSVGSAQR Bacteria Bacteria 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.3%) GO:0009090 (17.3%) GO:0009088 (13.4%)" GO:0005829 (17.3%) "GO:0004072 (17.3%) GO:0005524 (17.2%) GO:0016301 (0.2%)" "lysine biosynthetic process via diaminopimelate (17.3%) homoserine biosynthetic process (17.3%) threonine biosynthetic process (13.4%)" cytosol (17.3%) "aspartate kinase activity (17.3%) ATP binding (17.2%) kinase activity (0.2%)" "IPR001048 (13.2%) IPR018042 (13.2%) IPR001341 (13.1%)" "Aspartate/glutamate/uridylate kinase (13.2%) Aspartate kinase, conserved site (13.2%) Aspartate kinase (13.1%)" HSPVLFPIVGSVWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005975 (33.3%) "GO:0016853 (33.3%) GO:0030246 (33.3%)" carbohydrate metabolic process (33.3%) "isomerase activity (33.3%) carbohydrate binding (33.3%)" "IPR008183 (25%) IPR011013 (25%) IPR014718 (25%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (25%) Galactose mutarotase-like domain superfamily (25%) Glycoside hydrolase-type carbohydrate-binding (25%)" ATVDKPCPVNMTNHVYFNLDGEQSDVR root 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%) GO:0016853 (0.1%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%) isomerase activity (0.1%)" "IPR008183 (14.7%) IPR011013 (14.7%) IPR014718 (14.7%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (14.7%) Galactose mutarotase-like domain superfamily (14.7%) Glycoside hydrolase-type carbohydrate-binding (14.7%)" MLTLTPLLTDGQHNVALEEIIINGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" VKGTLHWLSCNHCLPAEVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (24.6%) GO:0005829 (24.6%) "GO:0004819 (24.6%) GO:0005524 (24.6%) GO:0016874 (1.5%)" glutaminyl-tRNA aminoacylation (24.6%) cytosol (24.6%) "glutamine-tRNA ligase activity (24.6%) ATP binding (24.6%) ligase activity (1.5%)" "IPR000924 (10.1%) IPR004514 (10.1%) IPR011035 (10.1%)" "Glutamyl/glutaminyl-tRNA synthetase (10.1%) Glutamine-tRNA synthetase (10.1%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (10.1%)" ILVATEKPFAAVAVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (47.4%) GO:0016616 (36.8%) GO:0004617 (10.5%)" "NAD binding (47.4%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (36.8%) phosphoglycerate dehydrogenase activity (10.5%)" "IPR006139 (25%) IPR006140 (25%) IPR029752 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 (25%)" SDIIDAEVLDAAKELK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.95 (75%) 1.1.1.81 (15%) 1.1.1.290 (10%)" "phosphoglycerate dehydrogenase (75%) hydroxypyruvate reductase (15%) 4-phosphoerythronate dehydrogenase (10%)" GO:0006564 (0.4%) "GO:0051287 (48.1%) GO:0016616 (39.3%) GO:0004617 (7.5%)" L-serine biosynthetic process (0.4%) "NAD binding (48.1%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (39.3%) phosphoglycerate dehydrogenase activity (7.5%)" "IPR006139 (33.3%) IPR036291 (33.3%) IPR006140 (33%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) NAD(P)-binding domain superfamily (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33%)" VGFEGGQMPLAR Bacteria Bacteria GO:0006412 (25.2%) GO:0022625 (25.2%) "GO:0003735 (25.2%) GO:0019843 (24.5%)" translation (25.2%) cytosolic large ribosomal subunit (25.2%) "structural constituent of ribosome (25.2%) rRNA binding (24.5%)" "IPR001196 (20%) IPR005749 (20%) IPR021131 (20%)" "Large ribosomal subunit protein uL15, conserved site (20%) Large ribosomal subunit protein uL15, bacteria (20%) Large ribosomal subunit protein uL15/eL18 (20%)" KAEKIDAEAAEEAPKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" CGLGEINLPAMQPGSSIMPGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.9%) GO:0006531 (24.9%)" GO:0005829 (24.9%) "GO:0008797 (24.9%) GO:0016853 (0.3%)" "tricarboxylic acid cycle (24.9%) aspartate metabolic process (24.9%)" cytosol (24.9%) "aspartate ammonia-lyase activity (24.9%) isomerase activity (0.3%)" "IPR008948 (13.7%) IPR018951 (13.7%) IPR020557 (13.7%)" "L-Aspartase-like (13.7%) Fumarase C, C-terminal (13.7%) Fumarate lyase, conserved site (13.7%)" VLNQFDDAGIVTR root "GO:1900705 (18.5%) GO:0045892 (6.4%) GO:0045893 (0%)" "GO:0005829 (18.5%) GO:0032993 (0.1%) GO:0005737 (0%)" "GO:0000976 (18.5%) GO:0008270 (18.5%) GO:0001217 (12.2%)" "negative regulation of siderophore biosynthetic process (18.5%) negative regulation of DNA-templated transcription (6.4%) positive regulation of DNA-templated transcription (0%)" "cytosol (18.5%) protein-DNA complex (0.1%) cytoplasm (0%)" "transcription cis-regulatory region binding (18.5%) zinc ion binding (18.5%) DNA-binding transcription repressor activity (12.2%)" "IPR002481 (25%) IPR036388 (25%) IPR036390 (25%)" "Ferric-uptake regulator (25%) Winged helix-like DNA-binding domain superfamily (25%) Winged helix DNA-binding domain superfamily (25%)" ELAAFSQFASDLDDATR root "7.1.2.2 (97.1%) 3.6.3.14 (2.7%) 2.6.1.16 (0.1%)" "H(+)-transporting two-sector ATPase (97.1%) Transferred entry: 7.1.2.2 (2.7%) glutamine--fructose-6-phosphate transaminase (isomerizing) (0.1%)" "GO:0015986 (0.1%) GO:0000902 (0%) GO:0006048 (0%)" "GO:0045259 (19%) GO:0005886 (18.6%) GO:0005737 (0%)" "GO:0005524 (19%) GO:0046933 (19%) GO:0043531 (19%)" "proton motive force-driven ATP synthesis (0.1%) cell morphogenesis (0%) UDP-N-acetylglucosamine biosynthetic process (0%)" "proton-transporting ATP synthase complex (19%) plasma membrane (18.6%) cytoplasm (0%)" "ATP binding (19%) proton-transporting ATP synthase activity, rotational mechanism (19%) ADP binding (19%)" "IPR000793 (10.1%) IPR005294 (10.1%) IPR038376 (10.1%)" "ATP synthase, alpha subunit, C-terminal (10.1%) ATP synthase, F1 complex, alpha subunit (10.1%) ATP synthase, alpha subunit, C-terminal domain superfamily (10.1%)" TINWKPESTGTGR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.4%) GO:0005737 (14.2%) "GO:0004822 (14.4%) GO:0005524 (14.4%) GO:0002161 (14.2%)" isoleucyl-tRNA aminoacylation (14.4%) cytoplasm (14.2%) "isoleucine-tRNA ligase activity (14.4%) ATP binding (14.4%) aminoacyl-tRNA deacylase activity (14.2%)" "IPR002300 (12.6%) IPR023586 (12.6%) IPR014729 (12.6%)" "Aminoacyl-tRNA synthetase, class Ia (12.6%) Isoleucine-tRNA ligase, type 2 (12.6%) Rossmann-like alpha/beta/alpha sandwich fold (12.6%)" ADWEKADEQFTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR046695 (100%) Domain of unknown function DUF6565 (100%) DMLLEHGATTSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" QKTLTTDTIIANSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.2%) GO:0006043 (14.2%) GO:0006046 (14.2%)" "GO:0005829 (13.5%) GO:0005737 (0.8%)" "GO:0004342 (14.2%) GO:0042802 (14.2%) GO:0016787 (0.2%)" "carbohydrate metabolic process (14.2%) glucosamine catabolic process (14.2%) N-acetylglucosamine catabolic process (14.2%)" "cytosol (13.5%) cytoplasm (0.8%)" "glucosamine-6-phosphate deaminase activity (14.2%) identical protein binding (14.2%) hydrolase activity (0.2%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" SYFSWLCGNKEYTLDAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (25%) IPR022615 (25%) IPR056147 (25%)" "Na(+)-translocating NADH-quinone reductase subunit A (25%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (25%) NqrA, N-terminal barrel-sandwich hybrid domain (25%)" MADAIDAYQPDYVVLAK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.5.1.10 (100%) formyltetrahydrofolate deformylase (100%) "GO:0006189 (32.6%) GO:0006730 (32.6%) GO:0006164 (0.3%)" GO:0005829 (0.3%) "GO:0008864 (32.6%) GO:0016787 (1%) GO:0042802 (0.3%)" "'de novo' IMP biosynthetic process (32.6%) one-carbon metabolic process (32.6%) purine nucleotide biosynthetic process (0.3%)" cytosol (0.3%) "formyltetrahydrofolate deformylase activity (32.6%) hydrolase activity (1%) identical protein binding (0.3%)" "IPR002376 (15%) IPR004810 (15%) IPR036477 (15%)" "Formyl transferase, N-terminal (15%) Formyltetrahydrofolate deformylase (15%) Formyl transferase, N-terminal domain superfamily (15%)" DALKGDPEPGEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" SLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAEK root "2.7.1.- (50%) 2.7.1.199 (50%)" "Phosphotransferases with an alcohol group as acceptor (50%) protein-N(pi)-phosphohistidine--D-glucose phosphotransferase (50%)" "GO:0009401 (32.1%) GO:0034763 (0.3%) GO:0043610 (0.3%)" "GO:0005737 (31.6%) GO:0005829 (0.3%) GO:0016020 (0.3%)" "GO:0016301 (31.9%) GO:0016740 (1.1%) GO:0046872 (0.8%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (32.1%) negative regulation of transmembrane transport (0.3%) regulation of carbohydrate utilization (0.3%)" "cytoplasm (31.6%) cytosol (0.3%) membrane (0.3%)" "kinase activity (31.9%) transferase activity (1.1%) metal ion binding (0.8%)" "IPR011055 (33.3%) IPR001127 (32.8%) IPR050890 (32.5%)" "Duplicated hybrid motif (33.3%) Phosphotransferase system, sugar-specific permease EIIA type 1 (32.8%) Phosphotransferase system EIIA component (32.5%)" FEQALILPEDVVKEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" SFTQDDAHIFCRPDQVK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.6%) GO:0005737 (16.6%) "GO:0004829 (16.6%) GO:0005524 (16.6%) GO:0046872 (16.6%)" threonyl-tRNA aminoacylation (16.6%) cytoplasm (16.6%) "threonine-tRNA ligase activity (16.6%) ATP binding (16.6%) metal ion binding (16.6%)" "IPR002314 (7.8%) IPR002320 (7.8%) IPR006195 (7.8%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.8%) Threonine-tRNA ligase, class IIa (7.8%) Aminoacyl-tRNA synthetase, class II (7.8%)" IVTAPTCGSCGVMPAVLYHLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.1.17 (100%) L-serine ammonia-lyase (100%) GO:0006094 (25%) "GO:0003941 (25%) GO:0046872 (25%) GO:0051539 (25%)" gluconeogenesis (25%) "L-serine ammonia-lyase activity (25%) metal ion binding (25%) 4 iron, 4 sulfur cluster binding (25%)" "IPR004644 (20.2%) IPR005130 (20.2%) IPR029009 (20.2%)" "Iron-sulphur-dependent L-serine dehydratase single chain form (20.2%) Serine dehydratase-like, alpha subunit (20.2%) Allosteric substrate binding domain superfamily (20.2%)" LRELAYLNAGIR Bacteria Bacteria "5.6.2.2 (98.8%) 5.99.1.3 (1.2%)" "DNA topoisomerase (ATP-hydrolyzing) (98.8%) Transferred entry: 5.6.2.2 (1.2%)" "GO:0006265 (14%) GO:0006261 (10.7%) GO:0032259 (0.2%)" "GO:0005737 (11%) GO:0005694 (10.8%)" "GO:0003677 (14%) GO:0005524 (14%) GO:0046872 (11.2%)" "DNA topological change (14%) DNA-templated DNA replication (10.7%) methylation (0.2%)" "cytoplasm (11%) chromosome (10.8%)" "DNA binding (14%) ATP binding (14%) metal ion binding (11.2%)" "IPR000565 (7.8%) IPR001241 (7.8%) IPR036890 (7.8%)" "DNA topoisomerase, type IIA, subunit B (7.8%) DNA topoisomerase, type IIA (7.8%) Histidine kinase/HSP90-like ATPase superfamily (7.8%)" GITEPTPTFSACFGAAFLSLHPTKYGEELVKK root 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.8%) GO:0005829 (17.8%) "GO:0004612 (17.8%) GO:0005524 (17.8%) GO:0046872 (16.5%)" gluconeogenesis (17.8%) cytosol (17.8%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.8%) ATP binding (17.8%) metal ion binding (16.5%)" "IPR001272 (25.7%) IPR013035 (25.7%) IPR008210 (24.3%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.7%) Phosphoenolpyruvate carboxykinase, C-terminal (25.7%) Phosphoenolpyruvate carboxykinase, N-terminal (24.3%)" TNQIDIITLTSYKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR006015 (50%) IPR006016 (50%)" "Universal stress protein A family (50%) UspA (50%)" IIRDDLFGNKER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.16.1.1 (100%) mercury(II) reductase (100%) "GO:0003955 (46.5%) GO:0050660 (46.5%) GO:0016152 (4.7%)" "NAD(P)H dehydrogenase (quinone) activity (46.5%) flavin adenine dinucleotide binding (46.5%) mercury (II) reductase (NADP+) activity (4.7%)" "IPR001100 (20%) IPR004099 (20%) IPR016156 (20%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (20%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (20%) FAD/NAD-linked reductase, dimerisation domain superfamily (20%)" KGTLAMQINPMTCGSSFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" SDKIILGGMGMTNDDYLFFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (31.7%) GO:1902600 (31.7%)" "GO:0005524 (31.7%) GO:0016787 (5%)" "ATP metabolic process (31.7%) proton transmembrane transport (31.7%)" "ATP binding (31.7%) hydrolase activity (5%)" "IPR000194 (20.1%) IPR004100 (20.1%) IPR022879 (20.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (20.1%) V-type ATP synthase regulatory subunit B/beta (20.1%)" SAEQAEEIHAHIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" KLMTEFNYNSVMQVPR root "GO:0006412 (16.4%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (17.1%) GO:1990904 (16.3%) GO:0005829 (0.1%)" "GO:0000049 (16.6%) GO:0019843 (16.6%) GO:0003735 (16.4%)" "translation (16.4%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (17.1%) ribonucleoprotein complex (16.3%) cytosol (0.1%)" "tRNA binding (16.6%) rRNA binding (16.6%) structural constituent of ribosome (16.4%)" "IPR022803 (16.9%) IPR031310 (16.7%) IPR002132 (16.5%)" "Large ribosomal subunit protein uL5 domain superfamily (16.9%) Large ribosomal subunit protein uL5, N-terminal (16.7%) Large ribosomal subunit protein uL5 (16.5%)" FGLANGVSYVSTGGGALLEAIEGK root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" DTYADPAQWNEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.7%) GO:0005829 (17.7%) "GO:0004612 (17.7%) GO:0005524 (17.7%) GO:0046872 (16.5%)" gluconeogenesis (17.7%) cytosol (17.7%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.7%) ATP binding (17.7%) metal ion binding (16.5%)" "IPR001272 (25.9%) IPR013035 (25.9%) IPR008210 (24.1%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.9%) Phosphoenolpyruvate carboxykinase, C-terminal (25.9%) Phosphoenolpyruvate carboxykinase, N-terminal (24.1%)" EAGSYGKDVR root 6.1.1.11 (100%) serine--tRNA ligase (100%) "GO:0006434 (23.8%) GO:0016260 (4.8%) GO:0006418 (0%)" "GO:0005737 (23.7%) GO:0005829 (0%)" "GO:0005524 (23.8%) GO:0004828 (23.8%) GO:0016874 (0.1%)" "seryl-tRNA aminoacylation (23.8%) selenocysteine biosynthetic process (4.8%) tRNA aminoacylation for protein translation (0%)" "cytoplasm (23.7%) cytosol (0%)" "ATP binding (23.8%) serine-tRNA ligase activity (23.8%) ligase activity (0.1%)" "IPR002314 (13.5%) IPR045864 (13.5%) IPR002317 (13.5%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (13.5%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (13.5%) Serine-tRNA ligase, type1 (13.5%)" TVEKQPVVAEPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.3%) IPR000795 (8.3%) IPR004161 (8.3%)" "Translation initiation factor IF-2, bacterial-like (8.3%) Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" ASVGEGDTIIVDFDKEEQKITTSIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0034605 (19.4%) GO:0006508 (11.1%)" GO:0005737 (19.4%) "GO:0005524 (19.4%) GO:0016887 (19.4%) GO:0008233 (11.1%)" "cellular response to heat (19.4%) proteolysis (11.1%)" cytoplasm (19.4%) "ATP binding (19.4%) ATP hydrolysis activity (19.4%) peptidase activity (11.1%)" "IPR001270 (8.3%) IPR001943 (8.3%) IPR003593 (8.3%)" "ClpA/B family (8.3%) UVR domain (8.3%) AAA+ ATPase domain (8.3%)" SNLQDKDLILR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR011990 (50.5%) IPR019734 (45.9%) IPR013105 (1.8%)" "Tetratricopeptide-like helical domain superfamily (50.5%) Tetratricopeptide repeat (45.9%) Tetratricopeptide repeat 2 (1.8%)" SVDPNTASPYASYLQYGHIAGIDEILEGKKPITDLGVK root "GO:0015833 (20.5%) GO:0015031 (18.7%) GO:0006857 (0.2%)" "GO:0030288 (20.4%) GO:0043190 (18.5%) GO:0005886 (0.2%)" "GO:1904680 (20.5%) GO:1900750 (0.2%)" "peptide transport (20.5%) protein transport (18.7%) oligopeptide transport (0.2%)" "outer membrane-bounded periplasmic space (20.4%) ATP-binding cassette (ABC) transporter complex (18.5%) plasma membrane (0.2%)" "peptide transmembrane transporter activity (20.5%) oligopeptide binding (0.2%)" "IPR000914 (25.6%) IPR039424 (25.6%) IPR023765 (24.7%)" "Solute-binding protein family 5 domain (25.6%) Solute-binding protein family 5 (25.6%) Solute-binding protein family 5, conserved site (24.7%)" EGTECIDTGMKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.1.1.131 (82.4%) 2.1.1.- (17.6%)" "precorrin-3B C(17)-methyltransferase (82.4%) Methyltransferases (17.6%)" "GO:0009236 (25%) GO:0032259 (25%)" "GO:0016993 (25%) GO:0030789 (13.2%) GO:0008168 (11.8%)" "cobalamin biosynthetic process (25%) methylation (25%)" "precorrin-8X methylmutase activity (25%) precorrin-3B C17-methyltransferase activity (13.2%) methyltransferase activity (11.8%)" "IPR000878 (11.1%) IPR003722 (11.1%) IPR006363 (11.1%)" "Tetrapyrrole methylase (11.1%) Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC (11.1%) Precorrin-3B C17-methyltransferase domain (11.1%)" KYIDECGPANFFGIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (18.9%) GO:0009098 (18.9%) GO:0009099 (18.9%)" "GO:0004084 (17.6%) GO:0052654 (5.7%) GO:0052655 (5.7%)" "isoleucine biosynthetic process (18.9%) L-leucine biosynthetic process (18.9%) L-valine biosynthetic process (18.9%)" "branched-chain-amino-acid transaminase activity (17.6%) L-leucine-2-oxoglutarate transaminase activity (5.7%) L-valine-2-oxoglutarate transaminase activity (5.7%)" "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" VLGTDPVSGKPVSVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.6.2.1 (100%) DNA topoisomerase (100%) GO:0006265 (25.3%) "GO:0003677 (25.3%) GO:0003917 (25.3%) GO:0046872 (24.1%)" DNA topological change (25.3%) "DNA binding (25.3%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25.3%) metal ion binding (24.1%)" "IPR000380 (7.3%) IPR003602 (7.3%) IPR013497 (7.3%)" "DNA topoisomerase, type IA (7.3%) DNA topoisomerase, type IA, DNA-binding domain (7.3%) DNA topoisomerase, type IA, central (7.3%)" DGFVLGDGAGMIVLEEYEHAK root "2.3.1.179 (99.8%) 2.3.1.41 (0.2%)" "beta-ketoacyl-[acyl-carrier-protein] synthase II (99.8%) beta-ketoacyl-[acyl-carrier-protein] synthase I (0.2%)" "GO:0006633 (32.8%) GO:0006233 (0.1%) GO:0006260 (0.1%)" "GO:0005829 (32.7%) GO:0005886 (0.1%) GO:0009360 (0.1%)" "GO:0004315 (32.8%) GO:0016746 (0.1%) GO:0003677 (0.1%)" "fatty acid biosynthetic process (32.8%) dTDP biosynthetic process (0.1%) DNA replication (0.1%)" "cytosol (32.7%) plasma membrane (0.1%) DNA polymerase III complex (0.1%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (32.8%) acyltransferase activity (0.1%) DNA binding (0.1%)" "IPR000794 (14.3%) IPR014030 (14.3%) IPR016039 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Thiolase-like (14.3%)" LSIVDVNAGAQPLYNQQK root 6.3.5.4 (100%) asparagine synthase (glutamine-hydrolyzing) (100%) "GO:0006529 (24.9%) GO:0070981 (0.3%) GO:0006541 (0.2%)" "GO:0005829 (25%) GO:0005737 (0.2%)" "GO:0004066 (25%) GO:0005524 (22.8%) GO:0016874 (0.6%)" "obsolete asparagine biosynthetic process (24.9%) L-asparagine biosynthetic process (0.3%) glutamine metabolic process (0.2%)" "cytosol (25%) cytoplasm (0.2%)" "asparagine synthase (glutamine-hydrolyzing) activity (25%) ATP binding (22.8%) ligase activity (0.6%)" "IPR017932 (14.9%) IPR029055 (14.9%) IPR050795 (14.9%)" "Glutamine amidotransferase type 2 domain (14.9%) Nucleophile aminohydrolases, N-terminal (14.9%) Asparagine Synthetase (14.9%)" LIANAQEEAKK Bacteria Bacteria "1.6.5.- (50%) 1.7.1.17 (50%)" "With a quinone or similar compound as acceptor (50%) FMN-dependent NADH-azoreductase (50%)" GO:0033178 (45.9%) "GO:0046961 (45.9%) GO:0016787 (2.7%) GO:0009055 (1.4%)" proton-transporting two-sector ATPase complex, catalytic domain (45.9%) "proton-transporting ATPase activity, rotational mechanism (45.9%) hydrolase activity (2.7%) electron transfer activity (1.4%)" "IPR002842 (83.3%) IPR002146 (2.4%) IPR003680 (2.4%)" "V-type ATPase subunit E (83.3%) ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast (2.4%) Flavodoxin-like fold (2.4%)" EVNSYIPGEGHNLQEHSIVLVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20.2%) "GO:0015935 (20.2%) GO:0005840 (0.2%)" "GO:0003735 (20.2%) GO:0019843 (20.2%) GO:0000049 (19.1%)" translation (20.2%) "small ribosomal subunit (20.2%) ribosome (0.2%)" "structural constituent of ribosome (20.2%) rRNA binding (20.2%) tRNA binding (19.1%)" "IPR005679 (33.3%) IPR006032 (33.3%) IPR012340 (33.3%)" "Ribosomal protein uS12, bacteria (33.3%) Small ribosomal subunit protein uS12 (33.3%) Nucleic acid-binding, OB-fold (33.3%)" IYSGGLGVLAGDYLK root "2.4.1.1 (97.9%) 2.4.1.11 (2.1%)" "glycogen phosphorylase (97.9%) glycogen(starch) synthase (2.1%)" "GO:0005975 (30.6%) GO:0005978 (1.9%)" GO:0005886 (0.1%) "GO:0030170 (32.5%) GO:0008184 (31.4%) GO:0004373 (1.9%)" "carbohydrate metabolic process (30.6%) glycogen biosynthetic process (1.9%)" plasma membrane (0.1%) "pyridoxal phosphate binding (32.5%) glycogen phosphorylase activity (31.4%) alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (1.9%)" "IPR052182 (24.7%) IPR011834 (24.3%) IPR024517 (24%)" "Glycogen_Maltodextrin_Phosphorylase (24.7%) Alpha-glucan phosphorylase (24.3%) Glycogen phosphorylase, domain of unknown function DUF3417 (24%)" AAGAKELNETLGNLYVAQGQYER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" STPDFSTAENNQELANEVSCLK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae IPR019705 (100%) Protein of unknown function DUF2594 (100%) VYESLTPLTETDLSEHIVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.49 (100%) glucose-6-phosphate dehydrogenase (NADP(+)) (100%) "GO:0006006 (20%) GO:0009051 (20%)" GO:0005829 (20%) "GO:0004345 (20%) GO:0050661 (20%)" "glucose metabolic process (20%) pentose-phosphate shunt, oxidative branch (20%)" cytosol (20%) "glucose-6-phosphate dehydrogenase activity (20%) NADP binding (20%)" "IPR001282 (20%) IPR019796 (20%) IPR022674 (20%)" "Glucose-6-phosphate dehydrogenase (20%) Glucose-6-phosphate dehydrogenase, active site (20%) Glucose-6-phosphate dehydrogenase, NAD-binding (20%)" LGNAVDPFGAIEQYGSDPLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0004822 (14.3%) GO:0005524 (14.3%)" isoleucyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) isoleucine-tRNA ligase activity (14.3%) ATP binding (14.3%)" "IPR002300 (12.6%) IPR002301 (12.6%) IPR013155 (12.6%)" "Aminoacyl-tRNA synthetase, class Ia (12.6%) Isoleucine-tRNA ligase (12.6%) Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding (12.6%)" DKPHLNIGTIGHVDHGK root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0070125 (10.1%) "GO:0005739 (9.8%) GO:0005829 (6.5%) GO:0032045 (5.5%)" "GO:0003746 (16.7%) GO:0003924 (16.7%) GO:0005525 (16.7%)" mitochondrial translational elongation (10.1%) "mitochondrion (9.8%) cytosol (6.5%) guanyl-nucleotide exchange factor complex (5.5%)" "translation elongation factor activity (16.7%) GTPase activity (16.7%) GTP binding (16.7%)" "IPR000795 (8.9%) IPR027417 (8.9%) IPR050055 (8.9%)" "Translational (tr)-type GTP-binding domain (8.9%) P-loop containing nucleoside triphosphate hydrolase (8.9%) Elongation factor Tu GTPase (8.9%)" PFRWPAGAYVSNGKFDHIMMAWETSITK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (35.1%) "GO:0016616 (29.8%) GO:0016615 (28.1%) GO:0030060 (7%)" malate metabolic process (35.1%) "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (29.8%) malate dehydrogenase activity (28.1%) L-malate dehydrogenase (NAD+) activity (7%)" "IPR015955 (17.6%) IPR022383 (17.6%) IPR010945 (16.8%)" "Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (17.6%) Lactate/malate dehydrogenase, C-terminal (17.6%) Malate dehydrogenase, type 2 (16.8%)" SNHVTLFVDSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR001063 (25.1%) IPR005727 (25.1%) IPR047867 (25.1%)" "Large ribosomal subunit protein uL22 (25.1%) Large ribosomal subunit protein uL22, bacterial/chloroplast-type (25.1%) Large ribosomal subunit protein uL22, bacteria/organella (25.1%)" KLANQLGCQLEAIAAGTGLAGIEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) GO:0033539 (32.5%) "GO:0009055 (32.5%) GO:0050660 (32.5%) GO:0016491 (2.5%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (32.5%) "electron transfer activity (32.5%) flavin adenine dinucleotide binding (32.5%) oxidoreductase activity (2.5%)" "IPR001308 (16.7%) IPR014729 (16.7%) IPR014730 (16.7%)" "Electron transfer flavoprotein alpha subunit/FixB (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.7%)" FIQGLQAALVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (1%) GO:0008270 (99%) regulation of DNA-templated transcription (1%) zinc ion binding (99%) "IPR000962 (51.8%) IPR037187 (48.2%)" "Zinc finger, DksA/TraR C4-type (51.8%) DksA, N-terminal domain superfamily (48.2%)" MYTVGETTGDAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.6%) GO:0006164 (0.7%)" GO:0005737 (20.3%) "GO:0004642 (20.3%) GO:0005524 (19.6%) GO:0046872 (19.6%)" "'de novo' IMP biosynthetic process (19.6%) purine nucleotide biosynthetic process (0.7%)" cytoplasm (20.3%) "phosphoribosylformylglycinamidine synthase activity (20.3%) ATP binding (19.6%) metal ion binding (19.6%)" "IPR010918 (11.4%) IPR036676 (11.4%) IPR036921 (11.4%)" "PurM-like, C-terminal domain (11.4%) PurM-like, C-terminal domain superfamily (11.4%) PurM-like, N-terminal domain superfamily (11.4%)" LSEETGNVYETVAIISK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (25%) GO:0000428 (25%) "GO:0003677 (25%) GO:0003899 (25%)" DNA-templated transcription (25%) DNA-directed RNA polymerase complex (25%) "DNA binding (25%) DNA-directed RNA polymerase activity (25%)" "IPR006110 (50%) IPR036161 (50%)" "RNA polymerase, subunit omega/Rpo6/RPB6 (50%) RPB6/omega subunit-like superfamily (50%)" KEEESGMVTGPVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" QLLVQENDYIR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.1%) "GO:0000428 (17.1%) GO:0031981 (0.3%)" "GO:0003677 (17.1%) GO:0003899 (17.1%) GO:0000287 (15.2%)" DNA-templated transcription (17.1%) "DNA-directed RNA polymerase complex (17.1%) nuclear lumen (0.3%)" "DNA binding (17.1%) DNA-directed RNA polymerase activity (17.1%) magnesium ion binding (15.2%)" "IPR007081 (9.5%) IPR045867 (9.5%) IPR000722 (9%)" "RNA polymerase Rpb1, domain 5 (9.5%) DNA-directed RNA polymerase, subunit beta-prime (9.5%) RNA polymerase, alpha subunit (9%)" ICNRNPLGSAAGYGSSFPLNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.2.1 (100%) argininosuccinate lyase (100%) "GO:0042450 (33.1%) GO:0006526 (0.8%)" GO:0005829 (33.1%) GO:0004056 (33.1%) "L-arginine biosynthetic process via ornithine (33.1%) L-arginine biosynthetic process (0.8%)" cytosol (33.1%) argininosuccinate lyase activity (33.1%) "IPR000362 (16.7%) IPR008948 (16.7%) IPR009049 (16.7%)" "Fumarate lyase family (16.7%) L-Aspartase-like (16.7%) Argininosuccinate lyase (16.7%)" KISIANVEVDALPELLDKEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016052 (33.3%) "GO:0004553 (33.3%) GO:0030246 (33.3%)" carbohydrate catabolic process (33.3%) "hydrolase activity, hydrolyzing O-glycosyl compounds (33.3%) carbohydrate binding (33.3%)" IPR010502 (100%) Carbohydrate-binding domain, family 9 (100%) KVIHSVQGLTR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.2.1.3 (100%) long-chain-fatty-acid--CoA ligase (100%) GO:0006631 (47.1%) "GO:0031956 (47.1%) GO:0004467 (5.9%)" fatty acid metabolic process (47.1%) "medium-chain fatty acid-CoA ligase activity (47.1%) long-chain fatty acid-CoA ligase activity (5.9%)" "IPR000873 (26.5%) IPR042099 (26.5%) IPR025110 (23.5%)" "AMP-dependent synthetase/ligase domain (26.5%) ANL, N-terminal domain (26.5%) AMP-binding enzyme, C-terminal domain (23.5%)" AHPHDGAGQGLIKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.2%) "GO:0030170 (33.2%) GO:0008184 (32.9%) GO:0004645 (0.3%)" carbohydrate metabolic process (33.2%) "pyridoxal phosphate binding (33.2%) glycogen phosphorylase activity (32.9%) 1,4-alpha-oligoglucan phosphorylase activity (0.3%)" "IPR011834 (25.1%) IPR052182 (25.1%) IPR000811 (24.9%)" "Alpha-glucan phosphorylase (25.1%) Glycogen_Maltodextrin_Phosphorylase (25.1%) Glycosyl transferase, family 35 (24.9%)" VMYYGAPVPLTNVATVTVPDAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006415 (33.3%) GO:0005737 (33.3%) GO:0043023 (33.3%) translational termination (33.3%) cytoplasm (33.3%) ribosomal large subunit binding (33.3%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" LQQASENSMVVHLFVDGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006508 (33.3%) GO:0005829 (33.3%) GO:0008237 (33.3%) proteolysis (33.3%) cytosol (33.3%) metallopeptidase activity (33.3%) "IPR002510 (16.7%) IPR035068 (16.7%) IPR036059 (16.7%)" "Metalloprotease TldD/E, N-terminal domain (16.7%) Metalloprotease TldD/PmbA, N-terminal (16.7%) Metalloprotease TldD/PmbA superfamily (16.7%)" NRSEQYEAHLDFPVSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" GQLVPDELIVDMLANVLDSKKPAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.4.3 (100%) adenylate kinase (100%) GO:0044209 (25%) GO:0005737 (25%) "GO:0004017 (25%) GO:0005524 (25%)" AMP salvage (25%) cytoplasm (25%) "AMP kinase activity (25%) ATP binding (25%)" "IPR000850 (33.3%) IPR027417 (33.3%) IPR033690 (33.3%)" "Adenylate kinase/UMP-CMP kinase (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%) Adenylate kinase, conserved site (33.3%)" AFDQIDNAPEEK root "3.6.5.3 (99.9%) 1.97.1.4 (0.1%)" "protein-synthesizing GTPase (99.9%) [formate-C-acetyltransferase]-activating enzyme (0.1%)" "GO:0006414 (0%) GO:0046677 (0%) GO:0032790 (0%)" "GO:0005829 (17.9%) GO:0032045 (8.6%) GO:0005886 (0.6%)" "GO:0003746 (18.2%) GO:0003924 (18%) GO:0005525 (18%)" "translational elongation (0%) response to antibiotic (0%) ribosome disassembly (0%)" "cytosol (17.9%) guanyl-nucleotide exchange factor complex (8.6%) plasma membrane (0.6%)" "translation elongation factor activity (18.2%) GTPase activity (18%) GTP binding (18%)" "IPR000795 (11.7%) IPR050055 (11.7%) IPR027417 (11.7%)" "Translational (tr)-type GTP-binding domain (11.7%) Elongation factor Tu GTPase (11.7%) P-loop containing nucleoside triphosphate hydrolase (11.7%)" ALPEGEKTEENILK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.1.3.18 (100%) phosphoglycolate phosphatase (100%) GO:0006281 (33.3%) GO:0005829 (33.3%) GO:0008967 (33.3%) DNA repair (33.3%) cytosol (33.3%) phosphoglycolate phosphatase activity (33.3%) "IPR006439 (16.7%) IPR023198 (16.7%) IPR023214 (16.7%)" "HAD hydrolase, subfamily IA (16.7%) Phosphoglycolate phosphatase-like, domain 2 (16.7%) HAD superfamily (16.7%)" FEVGEGIEKKEENFAEEVAK Bacillota Bacteria Bacillati Bacillota GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20.1%) IPR009060 (20.1%) IPR014039 (20.1%)" "Translation elongation factor EFTs/EF1B (20.1%) UBA-like superfamily (20.1%) Translation elongation factor EFTs/EF1B, dimerisation (20.1%)" IGVASLDELIDKTIPANIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" ACVDECPVDCIYEGSR root GO:0044550 (0.3%) "GO:0009055 (23.9%) GO:0046872 (23.9%) GO:0051539 (23.9%)" secondary metabolite biosynthetic process (0.3%) "electron transfer activity (23.9%) metal ion binding (23.9%) 4 iron, 4 sulfur cluster binding (23.9%)" "IPR000813 (19.9%) IPR017896 (19.9%) IPR017900 (19.9%)" "7Fe ferredoxin (19.9%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (19.9%) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (19.9%)" NVIAFVEYEFYPLANPSAGNLAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.3%) GO:0006044 (32.3%)" "GO:0004342 (32.3%) GO:0016853 (3.2%)" "carbohydrate metabolic process (32.3%) N-acetylglucosamine metabolic process (32.3%)" "glucosamine-6-phosphate deaminase activity (32.3%) isomerase activity (3.2%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" YVAVTYDLNVGEGEERELMEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0042026 (33.3%) GO:0005737 (33.3%) GO:0003755 (33.3%) protein refolding (33.3%) cytoplasm (33.3%) peptidyl-prolyl cis-trans isomerase activity (33.3%) "IPR001179 (43.8%) IPR046357 (43.8%) IPR048261 (12.5%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (43.8%) Peptidyl-prolyl cis-trans isomerase domain superfamily (43.8%) PPIase chaperone SlpA/SlyD-like, insertion domain superfamily (12.5%)" HGYELVNADGEKIGEVTSGTMSPMR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (15.4%) GO:0032259 (11.1%)" "GO:0005829 (15.4%) GO:0005960 (15.4%)" "GO:0004047 (15.4%) GO:0008483 (15.4%) GO:0008168 (11.1%)" "glycine decarboxylation via glycine cleavage system (15.4%) methylation (11.1%)" "cytosol (15.4%) glycine cleavage complex (15.4%)" "aminomethyltransferase activity (15.4%) transaminase activity (15.4%) methyltransferase activity (11.1%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" GVACEDSFR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.262 (100%) 4-hydroxythreonine-4-phosphate dehydrogenase (100%) "GO:0046872 (33.3%) GO:0051287 (33.3%) GO:0050570 (19%)" "metal ion binding (33.3%) NAD binding (33.3%) 4-hydroxythreonine-4-phosphate dehydrogenase activity (19%)" IPR005255 (100%) PdxA family (100%) GFIDSVIEPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.1.3.1 (50%) 6.-.-.- (50%)" "methylmalonyl-CoA carboxytransferase (50%) Ligases (50%)" GO:0015977 (22.5%) GO:0009317 (22.5%) "GO:0004658 (23.6%) GO:0003989 (22.5%) GO:0016740 (6.7%)" carbon fixation (22.5%) acetyl-CoA carboxylase complex (22.5%) "propionyl-CoA carboxylase activity (23.6%) acetyl-CoA carboxylase activity (22.5%) transferase activity (6.7%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" AAEAYAHFINTPEATEDDLTKYSFALFLNHDFEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0051301 (50%) GO:0009579 (50%) cell division (50%) thylakoid (50%) "IPR011990 (39.5%) IPR019734 (39.5%) IPR051685 (20.9%)" "Tetratricopeptide-like helical domain superfamily (39.5%) Tetratricopeptide repeat (39.5%) Ycf3/AcsC/BcsC/TPR Multifunctional (20.9%)" MKDEEWNDIIETNLSSVFR root 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) "GO:0030497 (28%) GO:0006629 (1%) GO:0032787 (1%)" "GO:0005829 (0.3%) GO:0005886 (0.3%) GO:0009360 (0.3%)" "GO:0004316 (29.4%) GO:0051287 (27.3%) GO:0016491 (1.4%)" "fatty acid elongation (28%) lipid metabolic process (1%) monocarboxylic acid metabolic process (1%)" "cytosol (0.3%) plasma membrane (0.3%) DNA polymerase III complex (0.3%)" "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (29.4%) NAD binding (27.3%) oxidoreductase activity (1.4%)" "IPR002347 (16.3%) IPR036291 (16.3%) IPR050259 (16.1%)" "Short-chain dehydrogenase/reductase SDR (16.3%) NAD(P)-binding domain superfamily (16.3%) Short-chain dehydrogenases/reductases (16.1%)" NLFGYNPYPDEIIEGFCR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "6.4.1.7 (75%) 2.1.3.1 (25%)" "2-oxoglutarate carboxylase (75%) methylmalonyl-CoA carboxytransferase (25%)" GO:0006094 (31.4%) GO:0005737 (31.4%) "GO:0004736 (31.4%) GO:0034029 (3.9%) GO:0047154 (2%)" gluconeogenesis (31.4%) cytoplasm (31.4%) "pyruvate carboxylase activity (31.4%) 2-oxoglutarate carboxylase activity (3.9%) methylmalonyl-CoA carboxytransferase activity (2%)" "IPR000891 (25%) IPR003379 (25%) IPR013785 (25%)" "Pyruvate carboxyltransferase (25%) Carboxylase, conserved domain (25%) Aldolase-type TIM barrel (25%)" YQEIANFTNGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006879 (20%) GO:0005829 (20%) "GO:0004322 (20%) GO:0008199 (20%) GO:0020037 (20%)" intracellular iron ion homeostasis (20%) cytosol (20%) "ferroxidase activity (20%) ferric iron binding (20%) heme binding (20%)" "IPR008331 (17.2%) IPR009078 (17.2%) IPR012347 (17.2%)" "Ferritin/DPS domain (17.2%) Ferritin-like superfamily (17.2%) Ferritin-like (17.2%)" LAEQEGVDIRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (9.1%) IPR009000 (9.1%) IPR015760 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translation protein, beta-barrel domain superfamily (9.1%) Translation initiation factor IF- 2 (9.1%)" IVNEPTAAALAYGLDK root "3.6.4.10 (99%) 3.6.4.- (0.6%) 1.3.1.74 (0.3%)" "non-chaperonin molecular chaperone ATPase (99%) Acting on ATP; involved in cellular and subcellular movement (0.6%) 2-alkenal reductase [NAD(P)(+)] (0.3%)" "GO:0006986 (1.7%) GO:0006616 (0.9%) GO:0036503 (0.8%)" "GO:0005788 (3.9%) GO:0005737 (1.2%) GO:0097691 (0.9%)" "GO:0005524 (27.3%) GO:0140662 (27.3%) GO:0051082 (21.5%)" "response to unfolded protein (1.7%) SRP-dependent cotranslational protein targeting to membrane, translocation (0.9%) ERAD pathway (0.8%)" "endoplasmic reticulum lumen (3.9%) cytoplasm (1.2%) bacterial extracellular vesicle (0.9%)" "ATP binding (27.3%) ATP-dependent protein folding chaperone (27.3%) unfolded protein binding (21.5%)" "IPR013126 (16.9%) IPR018181 (16.9%) IPR043129 (16.8%)" "Heat shock protein 70 family (16.9%) Heat shock protein 70, conserved site (16.9%) ATPase, nucleotide binding domain (16.8%)" EGVGSVEVIDLR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (25.5%) GO:0003863 (7.8%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (25.5%) branched-chain 2-oxo acid dehydrogenase activity (7.8%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" FKTVWTDPINAQEFAAGLIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0000166 (100%) nucleotide binding (100%) "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" AAISQASDVAALDNVR root 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.6%) "GO:0005737 (16.6%) GO:0005829 (0.1%) GO:0009328 (0.1%)" "GO:0004826 (17%) GO:0005524 (16.6%) GO:0000049 (15.6%)" phenylalanyl-tRNA aminoacylation (16.6%) "cytoplasm (16.6%) cytosol (0.1%) phenylalanine-tRNA ligase complex (0.1%)" "phenylalanine-tRNA ligase activity (17%) ATP binding (16.6%) tRNA binding (15.6%)" "IPR004188 (15%) IPR010978 (15%) IPR045864 (14.9%)" "Phenylalanine-tRNA ligase, class II, N-terminal (15%) Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm (15%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.9%)" TYLCDGGTGER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.9%) IPR007121 (7.9%) IPR007645 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) RNA polymerase, beta subunit, conserved site (7.9%) RNA polymerase Rpb2, domain 3 (7.9%)" ATSSMQFSHYAQVSSSIAK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" FEFPVYWGVDLASEHER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.4%) GO:0005737 (19%) "GO:0005524 (20.4%) GO:0004816 (20%) GO:0003676 (19.7%)" asparaginyl-tRNA aminoacylation (20.4%) cytoplasm (19%) "ATP binding (20.4%) asparagine-tRNA ligase activity (20%) nucleic acid binding (19.7%)" "IPR004364 (14.5%) IPR045864 (14.5%) IPR002312 (14.3%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (14.5%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.5%) Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.3%)" AALEPIEAEMTSLNKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0005524 (24.4%) GO:0016887 (24.4%) GO:0051082 (24.4%)" "ATP binding (24.4%) ATP hydrolysis activity (24.4%) unfolded protein binding (24.4%)" "IPR001404 (20%) IPR019805 (20%) IPR020568 (20%)" "Heat shock protein Hsp90 family (20%) Heat shock protein Hsp90, conserved site (20%) Ribosomal protein uS5 domain 2-type superfamily (20%)" TTPSSNLLDKMER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0051539 (88.6%) GO:0046872 (11.4%)" "4 iron, 4 sulfur cluster binding (88.6%) metal ion binding (11.4%)" "IPR007160 (33.3%) IPR017896 (33.3%) IPR050157 (20.4%)" "Domain of unknown function DUF362 (33.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (33.3%) Photosystem I iron-sulfur center (20.4%)" YQHINGLGTMEGIFEDICK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.7.4.3 (93.8%) 2.7.4.- (6.3%)" "adenylate kinase (93.8%) Phosphotransferases with a phosphate group as acceptor (6.3%)" GO:0044209 (25%) GO:0005737 (25%) "GO:0004017 (25%) GO:0005524 (25%)" AMP salvage (25%) cytoplasm (25%) "AMP kinase activity (25%) ATP binding (25%)" "IPR000850 (33.3%) IPR027417 (33.3%) IPR033690 (33.3%)" "Adenylate kinase/UMP-CMP kinase (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%) Adenylate kinase, conserved site (33.3%)" GLLTEAELDDIFSVQNLMHPAYK root 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (20.1%) GO:0006531 (20.1%) GO:0006533 (0%)" "GO:0005829 (20.1%) GO:0016020 (0%)" "GO:0008797 (20.2%) GO:0042802 (19%) GO:0016829 (0.2%)" "tricarboxylic acid cycle (20.1%) aspartate metabolic process (20.1%) L-aspartate catabolic process (0%)" "cytosol (20.1%) membrane (0%)" "aspartate ammonia-lyase activity (20.2%) identical protein binding (19%) lyase activity (0.2%)" "IPR018951 (12.7%) IPR008948 (12.7%) IPR051546 (12.7%)" "Fumarase C, C-terminal (12.7%) L-Aspartase-like (12.7%) Class-II Aspartate Ammonia-Lyase (12.7%)" VGTISANAGTNLGSLEEQLAQKADEMGAK root "GO:0006950 (16.7%) GO:0044010 (16.7%) GO:0046688 (16.7%)" GO:0009279 (50%) "response to stress (16.7%) single-species biofilm formation (16.7%) response to copper ion (16.7%)" cell outer membrane (50%) "IPR010854 (25.6%) IPR025543 (25.6%) IPR036275 (25.6%)" "YdgH/BhsA/McbA-like domain (25.6%) Dodecin-like (25.6%) YdgH-like superfamily (25.6%)" MVAPILEELSKEYAGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0045454 (32.7%) GO:0005829 (32.7%) "GO:0015035 (32.7%) GO:0046872 (2%)" cell redox homeostasis (32.7%) cytosol (32.7%) "protein-disulfide reductase activity (32.7%) metal ion binding (2%)" "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" SAGAYGEVMASQYNCR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.20 (100%) diaminopimelate decarboxylase (100%) GO:0009089 (34%) "GO:0008836 (34%) GO:0030170 (32%)" lysine biosynthetic process via diaminopimelate (34%) "diaminopimelate decarboxylase activity (34%) pyridoxal phosphate binding (32%)" "IPR009006 (14.8%) IPR022643 (14.8%) IPR000183 (14.3%)" "Alanine racemase/group IV decarboxylase, C-terminal (14.8%) Orn/DAP/Arg decarboxylase 2, C-terminal (14.8%) Ornithine/DAP/Arg decarboxylase (14.3%)" IGADAVALPENFR root GO:0016032 (50%) GO:0016020 (50%) viral process (50%) membrane (50%) IPR019276 (100%) Protein of unkown function DUF2303 (100%) ALQSGTSHFLGQNFAK root 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%) GO:0016020 (0.1%)" "GO:0004827 (20%) GO:0005524 (20%) GO:0016874 (0%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%) membrane (0.1%)" "proline-tRNA ligase activity (20%) ATP binding (20%) ligase activity (0%)" "IPR004499 (11.4%) IPR045864 (11.3%) IPR036621 (11.2%)" "Proline-tRNA ligase, class IIa, archaeal-type (11.4%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.3%) Anticodon-binding domain superfamily (11.2%)" VTEVSDKGVTVEKDGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (24.7%) GO:0005737 (24.7%) "GO:0004148 (24.7%) GO:0050660 (24.7%) GO:0016491 (1.1%)" 2-oxoglutarate metabolic process (24.7%) cytoplasm (24.7%) "dihydrolipoyl dehydrogenase (NADH) activity (24.7%) flavin adenine dinucleotide binding (24.7%) oxidoreductase activity (1.1%)" "IPR001100 (12.5%) IPR004099 (12.5%) IPR006258 (12.5%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (12.5%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.5%) Dihydrolipoamide dehydrogenase (12.5%)" NNPVIVYDTSGPYSDPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.1.99.17 (100%) phosphomethylpyrimidine synthase (100%) "GO:0009228 (16.7%) GO:0009229 (16.7%)" GO:0005829 (16.7%) "GO:0008270 (16.7%) GO:0051539 (16.7%) GO:0070284 (11.8%)" "thiamine biosynthetic process (16.7%) thiamine diphosphate biosynthetic process (16.7%)" cytosol (16.7%) "zinc ion binding (16.7%) 4 iron, 4 sulfur cluster binding (16.7%) phosphomethylpyrimidine synthase activity (11.8%)" "IPR002817 (25%) IPR025747 (25%) IPR037509 (25%)" "Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B (25%) ThiC-associated domain (25%) Phosphomethylpyrimidine synthase (25%)" EAGYPVEQADVKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.7.2.4 (57.1%) 1.1.1.3 (42.9%)" "aspartate kinase (57.1%) homoserine dehydrogenase (42.9%)" "GO:0009086 (11.1%) GO:0009088 (11.1%) GO:0009089 (11.1%)" "GO:0004072 (11.1%) GO:0004412 (11.1%) GO:0005524 (11.1%)" "methionine biosynthetic process (11.1%) threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%)" "aspartate kinase activity (11.1%) homoserine dehydrogenase activity (11.1%) ATP binding (11.1%)" "IPR001048 (7.1%) IPR001341 (7.1%) IPR001342 (7.1%)" "Aspartate/glutamate/uridylate kinase (7.1%) Aspartate kinase (7.1%) Homoserine dehydrogenase, catalytic (7.1%)" AIENSDVCVLMLDATR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0042254 (31.1%) "GO:0005525 (31.1%) GO:0043022 (31.1%) GO:0016787 (6.7%)" ribosome biogenesis (31.1%) "GTP binding (31.1%) ribosome binding (31.1%) hydrolase activity (6.7%)" "IPR005225 (14.3%) IPR006073 (14.3%) IPR015946 (14.3%)" "Small GTP-binding domain (14.3%) GTP binding domain (14.3%) K homology domain-like, alpha/beta (14.3%)" YVAGARPWGEKGDIALPSATQNELNGDEAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006537 (26%) GO:0005829 (26%) "GO:0004354 (26%) GO:0000166 (22%)" glutamate biosynthetic process (26%) cytosol (26%) "glutamate dehydrogenase (NADP+) activity (26%) nucleotide binding (22%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" KVVADIAGVPAQINIAEVR root "GO:0006412 (19.9%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0022627 (19.9%) GO:0005840 (0.4%) GO:0015934 (0.1%)" "GO:0003735 (20%) GO:0019843 (20%) GO:0003729 (19.5%)" "translation (19.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (19.9%) ribosome (0.4%) large ribosomal subunit (0.1%)" "structural constituent of ribosome (20%) rRNA binding (20%) mRNA binding (19.5%)" "IPR004044 (11.2%) IPR009019 (11.2%) IPR015946 (11.2%)" "K Homology domain, type 2 (11.2%) K homology domain superfamily, prokaryotic type (11.2%) K homology domain-like, alpha/beta (11.2%)" GYDYVAGQNHIPYYDSPYVNDPHDVSIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (51.9%) IPR041662 (48.1%)" "Tetratricopeptide-like helical domain superfamily (51.9%) SusD-like 2 (48.1%)" SDLSSFALKDLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" KLVVATDTAFVPFEFK root "GO:0006865 (22.7%) GO:0006868 (0%) GO:1903803 (0%)" "GO:0030288 (25.6%) GO:0016020 (25.5%) GO:0042597 (0.3%)" "GO:0015276 (25.5%) GO:0016597 (0.1%) GO:0016787 (0%)" "amino acid transport (22.7%) glutamine transport (0%) L-glutamine import across plasma membrane (0%)" "outer membrane-bounded periplasmic space (25.6%) membrane (25.5%) periplasmic space (0.3%)" "ligand-gated monoatomic ion channel activity (25.5%) amino acid binding (0.1%) hydrolase activity (0%)" "IPR001638 (25.3%) IPR018313 (25%) IPR001320 (24.8%)" "Solute-binding protein family 3/N-terminal domain of MltF (25.3%) Solute-binding protein family 3, conserved site (25%) Ionotropic glutamate receptor, C-terminal (24.8%)" KAATDLEFAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0051301 (100%) cell division (100%) "IPR011990 (51.3%) IPR019734 (48.7%)" "Tetratricopeptide-like helical domain superfamily (51.3%) Tetratricopeptide repeat (48.7%)" NNAGMVVTLMDWGATLLSAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (19.8%) GO:0033499 (19.8%) GO:0005975 (0.3%)" GO:0005737 (19.8%) "GO:0004034 (20.1%) GO:0030246 (20.1%) GO:0016853 (0.3%)" "glucose metabolic process (19.8%) galactose catabolic process via UDP-galactose, Leloir pathway (19.8%) carbohydrate metabolic process (0.3%)" cytoplasm (19.8%) "aldose 1-epimerase activity (20.1%) carbohydrate binding (20.1%) isomerase activity (0.3%)" "IPR011013 (14.8%) IPR014718 (14.8%) IPR008183 (14.7%)" "Galactose mutarotase-like domain superfamily (14.8%) Glycoside hydrolase-type carbohydrate-binding (14.8%) Aldose 1-/Glucose-6-phosphate 1-epimerase (14.7%)" AIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATVEAK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006096 (0.3%) GO:0006974 (0.3%)" GO:0005829 (32.6%) "GO:0003872 (32.6%) GO:0005524 (32.6%) GO:0000287 (0.3%)" "glycolytic process (0.3%) DNA damage response (0.3%)" cytosol (32.6%) "6-phosphofructokinase activity (32.6%) ATP binding (32.6%) magnesium ion binding (0.3%)" "IPR011611 (25.5%) IPR029056 (25.5%) IPR002173 (25.2%)" "Carbohydrate kinase PfkB (25.5%) Ribokinase-like (25.5%) Carbohydrate/purine kinase, PfkB, conserved site (25.2%)" EALANIAATTLENIRDFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.28 (100%) D-lactate dehydrogenase (100%) "GO:0008720 (50%) GO:0051287 (50%)" "D-lactate dehydrogenase (NAD+) activity (50%) NAD binding (50%)" "IPR006139 (25%) IPR006140 (25%) IPR029753 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (25%)" EFDCEHIPATTYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005980 (33.2%) "GO:0004134 (33.2%) GO:0004135 (33.2%) GO:0016740 (0.3%)" glycogen catabolic process (33.2%) "4-alpha-glucanotransferase activity (33.2%) amylo-alpha-1,6-glucosidase activity (33.2%) transferase activity (0.3%)" "IPR024742 (20.2%) IPR008928 (20%) IPR010401 (20%)" "Glycogen debranching enzyme, bacterial and archaeal type, N-terminal (20.2%) Six-hairpin glycosidase superfamily (20%) Glycogen debranching enzyme (20%)" ALYAIDDNATK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) KYSEQELNQMEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR002130 (25.7%) IPR020892 (25.7%) IPR044666 (25.7%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (25.7%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (25.7%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like (25.7%)" LLGETLLRLPGVNDTR Bacteria Bacteria "GO:0006524 (20.1%) GO:0043201 (20.1%) GO:0006355 (19.5%)" "GO:0005829 (20.1%) GO:0032993 (0%)" "GO:0043565 (20.1%) GO:0042802 (0%) GO:0000976 (0%)" "alanine catabolic process (20.1%) response to L-leucine (20.1%) regulation of DNA-templated transcription (19.5%)" "cytosol (20.1%) protein-DNA complex (0%)" "sequence-specific DNA binding (20.1%) identical protein binding (0%) transcription cis-regulatory region binding (0%)" "IPR011008 (12.8%) IPR019887 (12.8%) IPR019888 (12.5%)" "Dimeric alpha-beta barrel (12.8%) Transcription regulator AsnC/Lrp, ligand binding domain (12.8%) Transcription regulator AsnC-like (12.5%)" GLPCPNIFAGGLNFHGR Bacteria Bacteria "3.4.11.4 (99.6%) 3.4.11.- (0.4%)" "tripeptide aminopeptidase (99.6%) Aminopeptidases (0.4%)" "GO:0006508 (16.6%) GO:0043171 (15.9%) GO:0006518 (0.7%)" "GO:0005829 (16.5%) GO:0005737 (0.1%)" "GO:0045148 (16.7%) GO:0008237 (16.6%) GO:0008270 (16.6%)" "proteolysis (16.6%) peptide catabolic process (15.9%) peptide metabolic process (0.7%)" "cytosol (16.5%) cytoplasm (0.1%)" "tripeptide aminopeptidase activity (16.7%) metallopeptidase activity (16.6%) zinc ion binding (16.6%)" "IPR001261 (20%) IPR002933 (20%) IPR010161 (20%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%) Peptidase M20 (20%) Peptidase M20B, tripeptide aminopeptidase (20%)" KPWEQKVDIALPCATQNELNEADAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006537 (26.3%) GO:0005829 (23.7%) "GO:0004354 (26.3%) GO:0000166 (23.7%)" glutamate biosynthetic process (26.3%) cytosol (23.7%) "glutamate dehydrogenase (NADP+) activity (26.3%) nucleotide binding (23.7%)" "IPR006095 (12.5%) IPR006096 (12.5%) IPR006097 (12.5%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.5%)" DAGFQAFADKVLDAAVAGK root GO:0006414 (0.2%) "GO:0005737 (49.1%) GO:0005739 (0.1%) GO:0005829 (0.1%)" "GO:0003746 (50.1%) GO:0005085 (0.1%) GO:0008270 (0.1%)" translational elongation (0.2%) "cytoplasm (49.1%) mitochondrion (0.1%) cytosol (0.1%)" "translation elongation factor activity (50.1%) guanyl-nucleotide exchange factor activity (0.1%) zinc ion binding (0.1%)" "IPR001816 (20.1%) IPR014039 (20.1%) IPR018101 (20.1%)" "Translation elongation factor EFTs/EF1B (20.1%) Translation elongation factor EFTs/EF1B, dimerisation (20.1%) Translation elongation factor Ts, conserved site (20.1%)" HNVAPIFICPPNADDDLLR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 4.2.1.20 (100%) tryptophan synthase (100%) "GO:0000162 (0.2%) GO:0009073 (0.2%)" "GO:0005829 (49.1%) GO:0005737 (0.2%)" "GO:0004834 (49.1%) GO:0016829 (1.2%) GO:0060090 (0.2%)" "L-tryptophan biosynthetic process (0.2%) aromatic amino acid family biosynthetic process (0.2%)" "cytosol (49.1%) cytoplasm (0.2%)" "tryptophan synthase activity (49.1%) lyase activity (1.2%) molecular adaptor activity (0.2%)" "IPR002028 (25.1%) IPR011060 (25.1%) IPR013785 (25.1%)" "Tryptophan synthase, alpha chain (25.1%) Ribulose-phosphate binding barrel (25.1%) Aldolase-type TIM barrel (25.1%)" FNKFNFGQLAELNK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.51 (100%) alpha-L-fucosidase (100%) "GO:0006004 (25%) GO:0016139 (25%)" GO:0005764 (25%) GO:0004560 (25%) "fucose metabolic process (25%) glycoside catabolic process (25%)" lysosome (25%) alpha-L-fucosidase activity (25%) "IPR000933 (33.3%) IPR016286 (33.3%) IPR017853 (33.3%)" "Glycoside hydrolase, family 29 (33.3%) Alpha-L-fucosidase, metazoa-type (33.3%) Glycoside hydrolase superfamily (33.3%)" KYENIYQGLNSR Pseudomonadati Bacteria Pseudomonadati 2.6.1.- (100%) Transaminases (100%) GO:0000271 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" polysaccharide biosynthetic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000653 (25%) IPR015421 (25%) IPR015424 (25%)" "DegT/DnrJ/EryC1/StrS aminotransferase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%) Pyridoxal phosphate-dependent transferase (25%)" TVAEGVTEYMAWLNR root 5.1.3.20 (100%) ADP-glyceromanno-heptose 6-epimerase (100%) "GO:0097171 (21.8%) GO:0009244 (20.3%) GO:0005975 (5.4%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0008712 (26.3%) GO:0050661 (25.7%) GO:0016853 (0.4%)" "ADP-L-glycero-beta-D-manno-heptose biosynthetic process (21.8%) lipopolysaccharide core region biosynthetic process (20.3%) carbohydrate metabolic process (5.4%)" "cytosol (0%) membrane (0%)" "ADP-glyceromanno-heptose 6-epimerase activity (26.3%) NADP binding (25.7%) isomerase activity (0.4%)" "IPR036291 (33.7%) IPR001509 (33.4%) IPR011912 (32.9%)" "NAD(P)-binding domain superfamily (33.7%) NAD-dependent epimerase/dehydratase (33.4%) ADP-L-glycero-D-manno-heptose-6-epimerase (32.9%)" EIQGTPEEQKEMEESYAHLCK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (35%) "GO:0016615 (30%) GO:0016616 (30%) GO:0030060 (5%)" malate metabolic process (35%) "malate dehydrogenase activity (30%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (30%) L-malate dehydrogenase (NAD+) activity (5%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" SNGDIDTNEQVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" VLVSQPKPTSEKSPYYDIAEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.75 (100%) uroporphyrinogen-III synthase (100%) "GO:0006780 (32.6%) GO:0032259 (1.1%)" GO:0005829 (32.6%) "GO:0004852 (32.6%) GO:0008168 (1.1%)" "uroporphyrinogen III biosynthetic process (32.6%) methylation (1.1%)" cytosol (32.6%) "uroporphyrinogen-III synthase activity (32.6%) methyltransferase activity (1.1%)" "IPR003754 (33.7%) IPR039793 (33.7%) IPR036108 (32.6%)" "Tetrapyrrole biosynthesis, uroporphyrinogen III synthase (33.7%) Uroporphyrinogen-III synthase (33.7%) Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily (32.6%)" MAELPVEMFEEAVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (17.4%) GO:0009098 (17.4%) GO:0009099 (17.4%)" "GO:0004084 (23.9%) GO:0052654 (2.2%) GO:0052655 (2.2%)" "isoleucine biosynthetic process (17.4%) L-leucine biosynthetic process (17.4%) L-valine biosynthetic process (17.4%)" "branched-chain-amino-acid transaminase activity (23.9%) L-leucine-2-oxoglutarate transaminase activity (2.2%) L-valine-2-oxoglutarate transaminase activity (2.2%)" "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" THSQTSGWSLTEQDPFNNVGR Bacteria Bacteria 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (19.9%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (19.9%)" "IPR006098 (16.7%) IPR006099 (16.7%) IPR016176 (16.7%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (16.7%)" QWLYQTPEQILIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" NLFEFLGADYNTPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" NLGEAAHAVGAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.133 (100%) dTDP-4-dehydrorhamnose reductase (100%) GO:0019305 (33.3%) GO:0005829 (33.3%) GO:0008831 (33.3%) dTDP-rhamnose biosynthetic process (33.3%) cytosol (33.3%) dTDP-4-dehydrorhamnose reductase activity (33.3%) "IPR005913 (33.3%) IPR029903 (33.3%) IPR036291 (33.3%)" "dTDP-4-dehydrorhamnose reductase family (33.3%) RmlD-like substrate binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" YAVLSDILGDEDHLGDMDFK root "2.7.7.8 (99.8%) 3.1.13.1 (0.2%)" "polyribonucleotide nucleotidyltransferase (99.8%) exoribonuclease II (0.2%)" "GO:0006402 (14.3%) GO:0006396 (14.1%) GO:0006401 (0%)" "GO:0005829 (14.3%) GO:0016020 (0%)" "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "mRNA catabolic process (14.3%) RNA processing (14.1%) RNA catabolic process (0%)" "cytosol (14.3%) membrane (0%)" "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR012162 (8.1%) IPR015847 (8.1%) IPR004088 (8%)" "Polyribonucleotide nucleotidyltransferase (8.1%) Exoribonuclease, phosphorolytic domain 2 (8.1%) K Homology domain, type 1 (8%)" VSGEGHITCGHCR root "1.1.1.103 (99.8%) 1.-.-.- (0.1%) 2.3.1.- (0.1%)" "L-threonine 3-dehydrogenase (99.8%) Oxidoreductases (0.1%) Transferring groups other than amino-acyl groups (0.1%)" "GO:0019518 (19.8%) GO:0006567 (4.7%) GO:0006564 (0%)" "GO:0005737 (24.3%) GO:0005829 (0%) GO:0005759 (0%)" "GO:0008270 (25.3%) GO:0008743 (25%) GO:0016491 (0.7%)" "L-threonine catabolic process to glycine (19.8%) L-threonine catabolic process (4.7%) L-serine biosynthetic process (0%)" "cytoplasm (24.3%) cytosol (0%) mitochondrial matrix (0%)" "zinc ion binding (25.3%) L-threonine 3-dehydrogenase activity (25%) oxidoreductase activity (0.7%)" "IPR013154 (12.7%) IPR011032 (12.7%) IPR050129 (12.7%)" "Alcohol dehydrogenase-like, N-terminal (12.7%) GroES-like superfamily (12.7%) Zinc-containing alcohol dehydrogenase (12.7%)" SAGLQITPNSTGAGGSSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006826 (37.5%) "GO:0009279 (50%) GO:0016020 (3.1%)" GO:0015344 (9.4%) iron ion transport (37.5%) "cell outer membrane (50%) membrane (3.1%)" siderophore uptake transmembrane transporter activity (9.4%) "IPR008969 (13.2%) IPR012910 (13.2%) IPR023996 (13.2%)" "Carboxypeptidase-like, regulatory domain superfamily (13.2%) TonB-dependent receptor, plug domain (13.2%) TonB-dependent outer membrane protein, SusC/RagA (13.2%)" YFQSGTADVKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20.1%) GO:0006183 (20.1%)" "GO:0003938 (20.1%) GO:0046872 (20.1%) GO:0000166 (19.6%)" "GMP biosynthetic process (20.1%) GTP biosynthetic process (20.1%)" "IMP dehydrogenase activity (20.1%) metal ion binding (20.1%) nucleotide binding (19.6%)" "IPR001093 (16.8%) IPR005990 (16.8%) IPR013785 (16.8%)" "IMP dehydrogenase/GMP reductase (16.8%) Inosine-5'-monophosphate dehydrogenase (16.8%) Aldolase-type TIM barrel (16.8%)" VMSMFTDPDHIR Bacteria Bacteria 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (25%) GO:0005829 (25%) "GO:0004830 (25%) GO:0005524 (25%)" tryptophanyl-tRNA aminoacylation (25%) cytosol (25%) "tryptophan-tRNA ligase activity (25%) ATP binding (25%)" "IPR001412 (20%) IPR002305 (20%) IPR002306 (20%)" "Aminoacyl-tRNA synthetase, class I, conserved site (20%) Aminoacyl-tRNA synthetase, class Ic (20%) Tryptophan-tRNA ligase (20%)" SKTGDAHLGHVFTDGPKEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.8.4.12 (51.6%) 1.8.4.11 (48.4%)" "peptide-methionine (R)-S-oxide reductase (51.6%) peptide-methionine (S)-S-oxide reductase (48.4%)" "GO:0006979 (18.3%) GO:0030091 (18.3%)" GO:0005737 (18.3%) "GO:0008113 (18.3%) GO:0033743 (18.3%) GO:0033744 (8.4%)" "response to oxidative stress (18.3%) protein repair (18.3%)" cytoplasm (18.3%) "peptide-methionine (S)-S-oxide reductase activity (18.3%) peptide-methionine (R)-S-oxide reductase activity (18.3%) L-methionine (S)-S-oxide reductase activity (8.4%)" "IPR002569 (20%) IPR002579 (20%) IPR011057 (20%)" "Peptide methionine sulphoxide reductase MsrA domain (20%) Peptide methionine sulphoxide reductase MrsB domain (20%) Mss4-like superfamily (20%)" GGGLKPIPGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.3.1 (100%) citrate (Si)-synthase (100%) "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (24.8%) "GO:0036440 (22.9%) GO:0046912 (2.1%) GO:0016746 (0.2%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (24.8%) "citrate synthase activity (22.9%) acyltransferase activity, acyl groups converted into alkyl on transfer (2.1%) acyltransferase activity (0.2%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" FSISNMHFDTTR Bacteria Bacteria 4.1.99.1 (100%) tryptophanase (100%) GO:0009034 (100%) tryptophanase activity (100%) "IPR001597 (17.6%) IPR013440 (17.6%) IPR018176 (17.6%)" "Aromatic amino acid beta-eliminating lyase/threonine aldolase (17.6%) Tryptophanase (17.6%) Tryptophanase, conserved site (17.6%)" FNPNSEDGGEQR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (32.4%) "GO:0003723 (32.4%) GO:0120159 (32.4%) GO:0016829 (2.7%)" enzyme-directed rRNA pseudouridine synthesis (32.4%) "RNA binding (32.4%) rRNA pseudouridine synthase activity (32.4%) lyase activity (2.7%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" LKLPELPQTMLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" TIAMGSSDGLR root "7.1.2.2 (95.1%) 3.6.3.14 (4.9%)" "H(+)-transporting two-sector ATPase (95.1%) Transferred entry: 7.1.2.2 (4.9%)" GO:0042777 (0%) "GO:0045259 (23.5%) GO:0005886 (22.8%) GO:0016020 (0%)" "GO:0005524 (23.5%) GO:0046933 (23.5%) GO:0016787 (4.6%)" proton motive force-driven plasma membrane ATP synthesis (0%) "proton-transporting ATP synthase complex (23.5%) plasma membrane (22.8%) membrane (0%)" "ATP binding (23.5%) proton-transporting ATP synthase activity, rotational mechanism (23.5%) hydrolase activity (4.6%)" "IPR004100 (10.9%) IPR036121 (10.9%) IPR050053 (10.9%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.9%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily (10.9%) ATPase alpha/beta chains (10.9%)" DGTIHQFSAVEQDDQR root "GO:0042953 (33.1%) GO:0044874 (33%) GO:0006282 (0.1%)" "GO:0030288 (33%) GO:0005886 (0.1%) GO:0042597 (0.1%)" "GO:0005524 (0.1%) GO:0008047 (0.1%) GO:0016887 (0.1%)" "lipoprotein transport (33.1%) lipoprotein localization to outer membrane (33%) regulation of DNA repair (0.1%)" "outer membrane-bounded periplasmic space (33%) plasma membrane (0.1%) periplasmic space (0.1%)" "ATP binding (0.1%) enzyme activator activity (0.1%) ATP hydrolysis activity (0.1%)" "IPR004564 (32.9%) IPR018323 (32.9%) IPR029046 (32.9%)" "Outer membrane lipoprotein carrier protein LolA-like (32.9%) Outer membrane lipoprotein carrier protein LolA, Proteobacteria (32.9%) Lipoprotein localisation LolA/LolB/LppX (32.9%)" GNEIHTNGELPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" FDDNACVLLNNAGELR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.2%)" "GO:0003735 (24.9%) GO:0070180 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.2%)" "structural constituent of ribosome (24.9%) large ribosomal subunit rRNA binding (24.9%)" "IPR000218 (25%) IPR005745 (25%) IPR019972 (25%)" "Large ribosomal subunit protein uL14 (25%) Large ribosomal subunit protein uL14, bacteria (25%) Large ribosomal subunit protein uL14, conserved site (25%)" KHGLFDYYGAEDAK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae "1.2.7.1 (81.8%) 1.2.7.- (18.2%)" "pyruvate synthase (81.8%) With an iron-sulfur protein as acceptor (18.2%)" "GO:0006979 (16.7%) GO:0022900 (16.7%)" "GO:0005506 (16.7%) GO:0030976 (16.7%) GO:0051539 (16.7%)" "response to oxidative stress (16.7%) electron transport chain (16.7%)" "iron ion binding (16.7%) thiamine pyrophosphate binding (16.7%) 4 iron, 4 sulfur cluster binding (16.7%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" SSFEQPVETR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (58.3%) "GO:0016853 (37.5%) GO:0003755 (4.2%)" plasma membrane (58.3%) "isomerase activity (37.5%) peptidyl-prolyl cis-trans isomerase activity (4.2%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" GATDKFSLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" LEYMFGKPPR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" FDHILMAMETSITK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.1.1.- (50%) 1.1.1.37 (50%)" "With NAD(+) or NADP(+) as acceptor (50%) malate dehydrogenase (50%)" GO:0006108 (34.5%) "GO:0016615 (31%) GO:0016616 (31%) GO:0030060 (3.4%)" malate metabolic process (34.5%) "malate dehydrogenase activity (31%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (31%) L-malate dehydrogenase (NAD+) activity (3.4%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" DALLENVTVAADGKIDFADKSVTENTR Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.8%) GO:0005829 (17.8%) "GO:0004612 (17.8%) GO:0005524 (17.8%) GO:0046872 (16.4%)" gluconeogenesis (17.8%) cytosol (17.8%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.8%) ATP binding (17.8%) metal ion binding (16.4%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" ATLKPEGQAALDQLYSQLSNLDPK Bacteria Bacteria "GO:0034220 (17.7%) GO:0006811 (6.8%) GO:0006974 (0.1%)" "GO:0009279 (24.7%) GO:0046930 (24.6%) GO:0016020 (0.1%)" "GO:0015288 (24.7%) GO:0015075 (0.1%) GO:0016740 (0.1%)" "monoatomic ion transmembrane transport (17.7%) monoatomic ion transport (6.8%) DNA damage response (0.1%)" "cell outer membrane (24.7%) pore complex (24.6%) membrane (0.1%)" "porin activity (24.7%) monoatomic ion transmembrane transporter activity (0.1%) transferase activity (0.1%)" "IPR002368 (13%) IPR036737 (13%) IPR006665 (12.9%)" "Outer membrane protein, OmpA (13%) OmpA-like domain superfamily (13%) OmpA-like domain (12.9%)" YIDECGAANFFGIKDNTYITPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (19.5%) GO:0009098 (19.5%) GO:0009099 (19.5%)" "GO:0004084 (18.4%) GO:0052654 (5.1%) GO:0052655 (5.1%)" "isoleucine biosynthetic process (19.5%) L-leucine biosynthetic process (19.5%) L-valine biosynthetic process (19.5%)" "branched-chain-amino-acid transaminase activity (18.4%) L-leucine-2-oxoglutarate transaminase activity (5.1%) L-valine-2-oxoglutarate transaminase activity (5.1%)" "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" LVAKVPLKEMSSYSTALSSLTGGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (25.1%) "GO:0003746 (25.1%) GO:0005525 (25.1%) GO:0003924 (24.7%)" ribosome disassembly (25.1%) "translation elongation factor activity (25.1%) GTP binding (25.1%) GTPase activity (24.7%)" "IPR000640 (7.5%) IPR005517 (7.5%) IPR009000 (7.5%)" "Elongation factor EFG, domain V-like (7.5%) Translation elongation factor EFG/EF2, domain IV (7.5%) Translation protein, beta-barrel domain superfamily (7.5%)" AQFEEERVALVAK root GO:0006414 (0.1%) "GO:0005737 (49.1%) GO:0005739 (0.1%) GO:0005829 (0.1%)" "GO:0003746 (50.3%) GO:0005085 (0.1%) GO:0008270 (0.1%)" translational elongation (0.1%) "cytoplasm (49.1%) mitochondrion (0.1%) cytosol (0.1%)" "translation elongation factor activity (50.3%) guanyl-nucleotide exchange factor activity (0.1%) zinc ion binding (0.1%)" "IPR001816 (20.1%) IPR014039 (20.1%) IPR036402 (20.1%)" "Translation elongation factor EFTs/EF1B (20.1%) Translation elongation factor EFTs/EF1B, dimerisation (20.1%) Elongation factor Ts, dimerisation domain superfamily (20.1%)" TANFEDFAGPTGEA Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR021857 (100%) Protein of unknown function DUF3467 (100%) HSTLEHDYLTDGFWAMSR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.14.- (100%) Dipeptidyl-peptidases and tripeptidyl-peptidases (100%) "GO:0006508 (24.6%) GO:0043171 (24.6%)" "GO:0008239 (25.4%) GO:0070009 (25.4%)" "proteolysis (24.6%) peptide catabolic process (24.6%)" "dipeptidyl-peptidase activity (25.4%) serine-type aminopeptidase activity (25.4%)" "IPR009003 (33.7%) IPR019500 (33.7%) IPR043504 (32.6%)" "Peptidase S1, PA clan (33.7%) Peptidase S46 (33.7%) Peptidase S1, PA clan, chymotrypsin-like fold (32.6%)" YNNNIYVSMYGSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR015943 (50%) IPR031815 (50%)" "WD40/YVTN repeat-like-containing domain superfamily (50%) Protein of unknown function DUF5074 (50%)" FLYPGCGYGGSCFPK root "1.1.1.22 (92.6%) 1.1.1.- (7.4%)" "UDP-glucose 6-dehydrogenase (92.6%) With NAD(+) or NADP(+) as acceptor (7.4%)" "GO:0000271 (26.1%) GO:0006065 (21.3%)" "GO:0051287 (26.2%) GO:0003979 (26.1%) GO:0016616 (0.1%)" "polysaccharide biosynthetic process (26.1%) UDP-glucuronate biosynthetic process (21.3%)" "NAD binding (26.2%) UDP-glucose 6-dehydrogenase activity (26.1%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (0.1%)" "IPR014026 (12.6%) IPR017476 (12.6%) IPR008927 (12.5%)" "UDP-glucose/GDP-mannose dehydrogenase, dimerisation (12.6%) UDP-glucose/GDP-mannose dehydrogenase (12.6%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (12.5%)" INTVASEHPELTNYLYMTYATTGYDVNYYKNEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "6.3.5.5 (89.5%) 6.3.4.16 (5.3%) 6.3.4.6 (5.3%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (89.5%) carbamoyl-phosphate synthase (ammonia) (5.3%) urea carboxylase (5.3%)" "GO:0006541 (13.5%) GO:0006221 (13%) GO:0006526 (13%)" GO:0005737 (13.5%) "GO:0004088 (13.5%) GO:0005524 (13.5%) GO:0046872 (13%)" "glutamine metabolic process (13.5%) pyrimidine nucleotide biosynthetic process (13%) L-arginine biosynthetic process (13%)" cytoplasm (13.5%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.5%) ATP binding (13.5%) metal ion binding (13%)" "IPR005480 (10.3%) IPR016185 (10.3%) IPR036897 (10.3%)" "Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10.3%) Pre-ATP-grasp domain superfamily (10.3%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily (10.3%)" LFYIVEPDNAYFGEKDFQQIAVIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.2.1 (100%) pantoate--beta-alanine ligase (AMP-forming) (100%) GO:0015940 (25%) GO:0005829 (25%) "GO:0004592 (25%) GO:0005524 (25%)" pantothenate biosynthetic process (25%) cytosol (25%) "pantoate-beta-alanine ligase activity (25%) ATP binding (25%)" "IPR003721 (32.4%) IPR014729 (32.4%) IPR042176 (32.4%)" "Pantoate-beta-alanine ligase (32.4%) Rossmann-like alpha/beta/alpha sandwich fold (32.4%) Pantoate-beta-alanine ligase, C-terminal domain (32.4%)" DALLENVTVRADGSIDFADKSVTENTR root 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (25%) GO:0005829 (25%) "GO:0004612 (25%) GO:0005524 (25%)" gluconeogenesis (25%) cytosol (25%) "phosphoenolpyruvate carboxykinase (ATP) activity (25%) ATP binding (25%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" SMEHPGAAAR root "GO:0006412 (24.6%) GO:0006417 (0.2%) GO:0002181 (0%)" "GO:0015934 (24.5%) GO:0005840 (0.9%) GO:1990904 (0.3%)" "GO:0003735 (24.5%) GO:0070180 (24.4%) GO:0019843 (0.2%)" "translation (24.6%) regulation of translation (0.2%) cytoplasmic translation (0%)" "large ribosomal subunit (24.5%) ribosome (0.9%) ribonucleoprotein complex (0.3%)" "structural constituent of ribosome (24.5%) large ribosomal subunit rRNA binding (24.4%) rRNA binding (0.2%)" "IPR043141 (20.1%) IPR047865 (20.1%) IPR001790 (20.1%)" "Large ribosomal subunit protein uL10-like domain superfamily (20.1%) Large ribosomal subunit protein uL10, bacteria/organella (20.1%) Large ribosomal subunit protein uL10 (20.1%)" MIIYLHGFDSNSPGNHEK root GO:0005829 (0.8%) "GO:0016787 (98.5%) GO:0016788 (0.8%)" cytosol (0.8%) "hydrolase activity (98.5%) hydrolase activity, acting on ester bonds (0.8%)" "IPR008886 (34%) IPR029058 (33.4%) IPR022987 (32.6%)" "Uncharacterised protein family UPF0227/Esterase YqiA (34%) Alpha/Beta hydrolase fold (33.4%) Uncharacterised protein family UPF0227 (32.6%)" TTEPTPETAKEANAETNATPAESVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.3%) GO:0005829 (14.3%) "GO:0003723 (14.3%) GO:0004386 (14.3%) GO:0005524 (14.3%)" DNA-templated transcription termination (14.3%) cytosol (14.3%) "RNA binding (14.3%) helicase activity (14.3%) ATP binding (14.3%)" "IPR000194 (10%) IPR003593 (10%) IPR004665 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) Transcription termination factor Rho (10%)" IEAGQPTVCSETCVGR root "1.7.5.1 (70.1%) 1.7.99.4 (29.5%) 1.7.99.- (0.3%)" "nitrate reductase (quinone) (70.1%) Transferred entry: 1.7.1.1, 1.7.1.2, 1.7.1.3, 1.7.5.1, 1.7.7.2 an1.9.6.1 (29.5%) With other acceptors (0.3%)" "GO:0019645 (6.4%) GO:0042128 (6.3%) GO:0009061 (4.3%)" "GO:0009325 (10.6%) GO:0005886 (6.3%) GO:0016020 (4.4%)" "GO:0046872 (10.7%) GO:0051539 (10.7%) GO:0009055 (10.7%)" "anaerobic electron transport chain (6.4%) nitrate assimilation (6.3%) anaerobic respiration (4.3%)" "nitrate reductase complex (10.6%) plasma membrane (6.3%) membrane (4.4%)" "metal ion binding (10.7%) 4 iron, 4 sulfur cluster binding (10.7%) electron transfer activity (10.7%)" "IPR017896 (25.7%) IPR006547 (25.5%) IPR029263 (25.1%)" "4Fe-4S ferredoxin-type, iron-sulphur binding domain (25.7%) Nitrate reductase, beta subunit (25.5%) Respiratory nitrate reductase beta, C-terminal (25.1%)" QEVVQATEEIVAE Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR024623 (100%) Uncharacterised protein family YtxH (100%) HAAIEQQTEDKSEQLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) GO:0017004 (25%) GO:0030313 (25%) "GO:0016209 (25%) GO:0016491 (25%)" cytochrome complex assembly (25%) cell envelope (25%) "antioxidant activity (25%) oxidoreductase activity (25%)" "IPR000866 (16.7%) IPR013766 (16.7%) IPR017937 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Thioredoxin, conserved site (16.7%)" GIRPPQDLVEQVASRPYDVLNSEEAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR008323 (100%) Uncharacterised conserved protein UCP033563 (100%) ALAQISSEEWDIPLVIGGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (25%) GO:0009898 (25%) "GO:0003842 (25%) GO:0004657 (25%)" L-proline catabolic process to L-glutamate (25%) cytoplasmic side of plasma membrane (25%) "L-glutamate gamma-semialdehyde dehydrogenase activity (25%) proline dehydrogenase activity (25%)" "IPR005931 (14.3%) IPR015590 (14.3%) IPR016160 (14.3%)" "Delta-1-pyrroline-5-carboxylate dehydrogenase (14.3%) Aldehyde dehydrogenase domain (14.3%) Aldehyde dehydrogenase, cysteine active site (14.3%)" ELAPQVMAFVEQGIKEGCPVCAQIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (12.9%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (12.9%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" AVVSGLLNVAGLNYGALPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" STGSYSLVTQQPLGGK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.8%) GO:0006412 (0%) GO:0046677 (0%)" "GO:0000428 (20.1%) GO:0009536 (0.1%) GO:0009507 (0.1%)" "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (19.9%)" "DNA-templated transcription (19.8%) translation (0%) response to antibiotic (0%)" "DNA-directed RNA polymerase complex (20.1%) plastid (0.1%) chloroplast (0.1%)" "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (19.9%)" "IPR015712 (7.9%) IPR007120 (7.9%) IPR037033 (7.9%)" "DNA-directed RNA polymerase, subunit 2 (7.9%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily (7.9%)" VVCQIVSSLVKGDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR001787 (33.3%) IPR028909 (33.3%) IPR036164 (33.3%)" "Large ribosomal subunit protein bL21 (33.3%) Large ribosomal subunit protein bL21-like (33.3%) Large ribosomal subunit protein bL21-like superfamily (33.3%)" TDEQSGQTIISGMGELHLDIIIDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.1%) GO:0005737 (19.8%) "GO:0003746 (20.1%) GO:0005525 (20.1%) GO:0003924 (19.8%)" ribosome disassembly (20.1%) cytoplasm (19.8%) "translation elongation factor activity (20.1%) GTP binding (20.1%) GTPase activity (19.8%)" "IPR000640 (6.3%) IPR004161 (6.3%) IPR005517 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%) Translation elongation factor EFG/EF2, domain IV (6.3%)" HNIPSEDIEALIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005829 (31%) "GO:0000287 (31%) GO:0016791 (31%) GO:0016853 (6.9%)" cytosol (31%) "magnesium ion binding (31%) phosphatase activity (31%) isomerase activity (6.9%)" "IPR000150 (25%) IPR006379 (25%) IPR023214 (25%)" "Cof family (25%) HAD-superfamily hydrolase, subfamily IIB (25%) HAD superfamily (25%)" KALTEANGDIELAIENMR root GO:0006414 (0.2%) "GO:0005737 (49.2%) GO:0005739 (0.1%) GO:0005829 (0.1%)" "GO:0003746 (50.2%) GO:0005085 (0.1%) GO:0008270 (0.1%)" translational elongation (0.2%) "cytoplasm (49.2%) mitochondrion (0.1%) cytosol (0.1%)" "translation elongation factor activity (50.2%) guanyl-nucleotide exchange factor activity (0.1%) zinc ion binding (0.1%)" "IPR001816 (20.1%) IPR009060 (20.1%) IPR018101 (20.1%)" "Translation elongation factor EFTs/EF1B (20.1%) UBA-like superfamily (20.1%) Translation elongation factor Ts, conserved site (20.1%)" NLFFYEPGEDGPEETVILGAEKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.49 (100%) glucose-6-phosphate dehydrogenase (NADP(+)) (100%) "GO:0006006 (20%) GO:0009051 (20%)" GO:0005829 (20%) "GO:0004345 (20%) GO:0050661 (20%)" "glucose metabolic process (20%) pentose-phosphate shunt, oxidative branch (20%)" cytosol (20%) "glucose-6-phosphate dehydrogenase activity (20%) NADP binding (20%)" "IPR001282 (20%) IPR019796 (20%) IPR022674 (20%)" "Glucose-6-phosphate dehydrogenase (20%) Glucose-6-phosphate dehydrogenase, active site (20%) Glucose-6-phosphate dehydrogenase, NAD-binding (20%)" KFGEGIFGADK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (19.9%) GO:0042274 (19.9%)" "GO:0015935 (19.9%) GO:0005840 (0.3%)" "GO:0019843 (20.2%) GO:0003735 (19.9%)" "translation (19.9%) ribosomal small subunit biogenesis (19.9%)" "small ribosomal subunit (19.9%) ribosome (0.3%)" "rRNA binding (20.2%) structural constituent of ribosome (19.9%)" "IPR001912 (16.9%) IPR002942 (16.6%) IPR005709 (16.6%)" "Small ribosomal subunit protein uS4, N-terminal (16.9%) RNA-binding S4 domain (16.6%) Small ribosomal subunit protein uS4, bacteria (16.6%)" IMAIHAGLECGLFLEKYPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" LNVPENPIIPYIEGDGIGVDVTPAMLK root 1.1.1.42 (100%) isocitrate dehydrogenase (NADP(+)) (100%) "GO:0006099 (21.6%) GO:0006097 (17.5%) GO:0006979 (0.1%)" "GO:0005737 (0.1%) GO:0005829 (0.1%)" "GO:0004450 (21.6%) GO:0000287 (17%) GO:0051287 (17%)" "tricarboxylic acid cycle (21.6%) glyoxylate cycle (17.5%) response to oxidative stress (0.1%)" "cytoplasm (0.1%) cytosol (0.1%)" "isocitrate dehydrogenase (NADP+) activity (21.6%) magnesium ion binding (17%) NAD binding (17%)" "IPR004439 (36.2%) IPR024084 (35.2%) IPR019818 (28.6%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (36.2%) Isopropylmalate dehydrogenase-like domain (35.2%) Isocitrate/isopropylmalate dehydrogenase, conserved site (28.6%)" DLSDVTLGQFAGK Bacteria Bacteria "1.11.1.24 (92.1%) 1.11.1.- (7.3%) 1.11.1.15 (0.7%)" "thioredoxin-dependent peroxiredoxin (92.1%) Peroxidases (7.3%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (0.7%)" GO:0034599 (46.2%) "GO:0005829 (0.4%) GO:0042597 (0.4%)" "GO:0008379 (48.7%) GO:0004601 (3.9%) GO:0032843 (0.4%)" cellular response to oxidative stress (46.2%) "cytosol (0.4%) periplasmic space (0.4%)" "thioredoxin peroxidase activity (48.7%) peroxidase activity (3.9%) hydroperoxide reductase activity (0.4%)" "IPR036249 (17%) IPR050455 (16.9%) IPR013740 (16.8%)" "Thioredoxin-like superfamily (17%) Thiol Peroxidase Tpx Subfamily (16.9%) Redoxin (16.8%)" ATVEGLGTRGEVPVFPIQIFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.17.4.2 (100%) ribonucleoside-triphosphate reductase (thioredoxin) (100%) "GO:0006260 (16.4%) GO:0009265 (16.4%)" GO:0031250 (16.4%) "GO:0004748 (16.4%) GO:0005524 (16.4%) GO:0008998 (16.4%)" "DNA replication (16.4%) 2'-deoxyribonucleotide biosynthetic process (16.4%)" anaerobic ribonucleoside-triphosphate reductase complex (16.4%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.4%) ATP binding (16.4%) ribonucleoside-triphosphate reductase (thioredoxin) activity (16.4%)" "IPR005144 (50%) IPR012833 (50%)" "ATP-cone domain (50%) Ribonucleoside-triphosphate reductase, anaerobic (50%)" YAWEEAEHASK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (50%) GO:0004601 (21%) GO:0016491 (19.8%)" "iron ion binding (50%) peroxidase activity (21%) oxidoreductase activity (19.8%)" "IPR003251 (12.7%) IPR009040 (12.7%) IPR009078 (12.7%)" "Rubrerythrin, diiron-binding domain (12.7%) Ferritin-like diiron domain (12.7%) Ferritin-like superfamily (12.7%)" AAVANFGNDIQVVGINDLLDADYLAYMLKYDSVHGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (8.3%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (8.3%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" VSNTGQLLDLSLGYTHNIYLQLPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0002181 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" cytoplasmic translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000702 (20%) IPR002358 (20%) IPR019906 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, conserved site (20%) Large ribosomal subunit protein uL6, bacteria (20%)" FQMATSQLDNTAR Coriobacteriia Bacteria Bacillati Actinomycetota Coriobacteriia GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001854 (25.9%) IPR036049 (25.9%) IPR050063 (25.9%)" "Large ribosomal subunit protein uL29 (25.9%) Large ribosomal subunit protein uL29 superfamily (25.9%) Universal ribosomal protein uL29 (25.9%)" ELAGWMCDVLDSINDEAVIER root 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (16.1%) GO:0035999 (15.3%) GO:0032259 (8.4%)" "GO:0005829 (16.1%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0004372 (16.2%) GO:0030170 (16.1%) GO:0008168 (8.4%)" "glycine biosynthetic process from serine (16.1%) tetrahydrofolate interconversion (15.3%) methylation (8.4%)" "cytosol (16.1%) cytoplasm (0.1%) membrane (0.1%)" "glycine hydroxymethyltransferase activity (16.2%) pyridoxal phosphate binding (16.1%) methyltransferase activity (8.4%)" "IPR015422 (14.5%) IPR015424 (14.5%) IPR039429 (14.4%)" "Pyridoxal phosphate-dependent transferase, small domain (14.5%) Pyridoxal phosphate-dependent transferase (14.5%) Serine hydroxymethyltransferase-like domain (14.4%)" TGIEAEFSGMKLELLEHAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046961 (95.5%) GO:0016787 (4.5%)" "proton-transporting ATPase activity, rotational mechanism (95.5%) hydrolase activity (4.5%)" IPR002699 (100%) ATPase, V1 complex, subunit D (100%) FGFIVRPEANKIEIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.2%) "GO:0005840 (20.5%) GO:1990904 (20.2%)" "GO:0003735 (20.2%) GO:0019843 (19%)" translation (20.2%) "ribosome (20.5%) ribonucleoprotein complex (20.2%)" "structural constituent of ribosome (20.2%) rRNA binding (19%)" "IPR012677 (33.3%) IPR012678 (33.3%) IPR013025 (33.3%)" "Nucleotide-binding alpha-beta plait domain superfamily (33.3%) Ribosomal protein uL23/eL15/eS24 core domain superfamily (33.3%) Large ribosomal subunit protein uL23-like (33.3%)" LAPFVDFPIIFASALTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0042254 (31%) "GO:0005525 (32.4%) GO:0043022 (32.4%) GO:0016787 (2.8%)" ribosome biogenesis (31%) "GTP binding (32.4%) ribosome binding (32.4%) hydrolase activity (2.8%)" "IPR015946 (14.6%) IPR027417 (14.6%) IPR032859 (14.6%)" "K homology domain-like, alpha/beta (14.6%) P-loop containing nucleoside triphosphate hydrolase (14.6%) GTPase Der, C-terminal KH-domain-like (14.6%)" TPEGMACGSMGPTTAGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" VCCSASPVYYKEGEGSLAISLQSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0045493 (4%) GO:0030313 (92%) GO:0016798 (4%) xylan catabolic process (4%) cell envelope (92%) hydrolase activity, acting on glycosyl bonds (4%) "IPR036941 (50%) IPR051648 (50%)" "Receptor L-domain superfamily (50%) Cell Wall Integrity and Assembly Regulator (50%)" LQGFNVLHPMGYDAYGLPAEQYAIQTGQHPEITTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.4 (100%) leucine--tRNA ligase (100%) GO:0006429 (20%) GO:0005829 (20%) "GO:0002161 (20%) GO:0004823 (20%) GO:0005524 (20%)" leucyl-tRNA aminoacylation (20%) cytosol (20%) "aminoacyl-tRNA deacylase activity (20%) leucine-tRNA ligase activity (20%) ATP binding (20%)" "IPR001412 (12.5%) IPR002302 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Leucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" IIELEGVPVLDPKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006879 (19.8%) GO:0005829 (19.8%) "GO:0004322 (19.8%) GO:0008199 (19.8%) GO:0020037 (19.8%)" intracellular iron ion homeostasis (19.8%) cytosol (19.8%) "ferroxidase activity (19.8%) ferric iron binding (19.8%) heme binding (19.8%)" "IPR008331 (16.7%) IPR009040 (16.7%) IPR009078 (16.7%)" "Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%) Ferritin-like superfamily (16.7%)" FFLSYANVWAGNIRPEEILKR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.24.- (100%) Metalloendopeptidases (100%) GO:0016485 (25%) GO:0005886 (25%) "GO:0004222 (25%) GO:0046872 (25%)" protein processing (25%) plasma membrane (25%) "metalloendopeptidase activity (25%) metal ion binding (25%)" "IPR000718 (20%) IPR008753 (20%) IPR018497 (20%)" "Peptidase M13 (20%) Peptidase M13, N-terminal domain (20%) Peptidase M13, C-terminal domain (20%)" MIADQADNEHILQEAFLNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.1.3.23 (100%) sugar-phosphatase (100%) GO:0005829 (25%) "GO:0000287 (25%) GO:0016289 (25%) GO:0016791 (23.1%)" cytosol (25%) "magnesium ion binding (25%) acyl-CoA hydrolase activity (25%) phosphatase activity (23.1%)" "IPR000150 (14.3%) IPR003736 (14.3%) IPR006379 (14.3%)" "Cof family (14.3%) Phenylacetic acid degradation-related domain (14.3%) HAD-superfamily hydrolase, subfamily IIB (14.3%)" ALENIEGDFSDLNVALK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" ALVNFDETNESSGIYSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR024299 (25%) IPR035376 (25%) IPR038143 (25%)" "NigD-like N-terminal OB domain (25%) NigD-like, C-terminal domain (25%) NigD-like, C-terminal domain superfamily (25%)" TAEIINDLDHIPAIELNISCPNVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.3.-.- (92.3%) 1.3.1.14 (7.7%)" "Acting on the CH-CH group of donors (92.3%) dihydroorotate dehydrogenase (NAD(+)) (7.7%)" "GO:0006207 (25%) GO:0044205 (25%)" GO:0005737 (25%) "GO:0004589 (15.4%) GO:0004152 (9.6%)" "'de novo' pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" cytoplasm (25%) "dihydroorotate dehydrogenase (NAD+) activity (15.4%) dihydroorotate dehydrogenase activity (9.6%)" "IPR001295 (12.5%) IPR005720 (12.5%) IPR012135 (12.5%)" "Dihydroorotate dehydrogenase, conserved site (12.5%) Dihydroorotate dehydrogenase, catalytic (12.5%) Dihydroorotate dehydrogenase, class 1/ 2 (12.5%)" ALPMGNGTVQDAVTDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (48.5%) GO:0003746 (51.5%) cytoplasm (48.5%) translation elongation factor activity (51.5%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" VKEAYDLLVEGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20.2%) IPR011258 (20.2%) IPR006124 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.2%) BPG-independent PGAM, N-terminal (20.2%) Metalloenzyme (20%)" DAGYTAVISHR root "4.2.1.11 (99.9%) 6.3.4.2 (0.1%)" "phosphopyruvate hydratase (99.9%) CTP synthase (glutamine hydrolyzing) (0.1%)" "GO:0006096 (16.7%) GO:0019856 (0%) GO:0044210 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.1%)" "glycolytic process (16.7%) pyrimidine nucleobase biosynthetic process (0%) 'de novo' CTP biosynthetic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.1%)" "IPR000941 (16.8%) IPR020810 (16.8%) IPR036849 (16.8%)" "Enolase (16.8%) Enolase, C-terminal TIM barrel domain (16.8%) Enolase-like, C-terminal domain superfamily (16.8%)" MREEDPTWVIEQSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.2%) "GO:0003746 (25.2%) GO:0005525 (25.2%) GO:0003924 (24.3%)" ribosome disassembly (25.2%) "translation elongation factor activity (25.2%) GTP binding (25.2%) GTPase activity (24.3%)" "IPR035647 (7.7%) IPR041095 (7.7%) IPR005517 (7.6%)" "EF-G domain III/V-like (7.7%) Elongation Factor G, domain II (7.7%) Translation elongation factor EFG/EF2, domain IV (7.6%)" VAIIEPSEGSPAAEIGLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.4.21.- (80%) 3.4.21.102 (20%)" "Serine endopeptidases (80%) C-terminal processing peptidase (20%)" "GO:0006508 (20.2%) GO:0007165 (20.2%)" GO:0030288 (20.2%) "GO:0004175 (19.1%) GO:0008236 (19.1%) GO:0004252 (1.1%)" "proteolysis (20.2%) signal transduction (20.2%)" outer membrane-bounded periplasmic space (20.2%) "endopeptidase activity (19.1%) serine-type peptidase activity (19.1%) serine-type endopeptidase activity (1.1%)" "IPR001478 (16.7%) IPR004447 (16.7%) IPR005151 (16.7%)" "PDZ domain (16.7%) C-terminal-processing peptidase S41A (16.7%) Tail specific protease (16.7%)" TLLQYSPSSTNSQPWHFIVASTEEGKAR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "1.5.1.34 (66.7%) 1.-.-.- (33.3%)" "6,7-dihydropteridine reductase (66.7%) Oxidoreductases (33.3%)" GO:0046256 (28.2%) "GO:0005829 (28.2%) GO:0016020 (0%)" "GO:0046857 (28.1%) GO:0004155 (15%) GO:0016491 (0.4%)" 2,4,6-trinitrotoluene catabolic process (28.2%) "cytosol (28.2%) membrane (0%)" "oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor (28.1%) 6,7-dihydropteridine reductase activity (15%) oxidoreductase activity (0.4%)" "IPR029479 (25.2%) IPR000415 (25.2%) IPR050627 (24.9%)" "Nitroreductase (25.2%) Nitroreductase-like (25.2%) Nitroreductase/BluB (24.9%)" KDELAFILSPDGSTPAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.13.11.24 (100%) quercetin 2,3-dioxygenase (100%) "GO:0046872 (87.5%) GO:0008127 (12.5%)" "metal ion binding (87.5%) quercetin 2,3-dioxygenase activity (12.5%)" "IPR003829 (20%) IPR011051 (20%) IPR012093 (20%)" "Pirin, N-terminal domain (20%) RmlC-like cupin domain superfamily (20%) Pirin (20%)" VLFEHNAVGLYGENGVEGVHLVKR Bacteria Bacteria 1.8.1.9 (100%) thioredoxin-disulfide reductase (NADPH) (100%) GO:0019430 (32.8%) GO:0005737 (32.8%) "GO:0004791 (32.8%) GO:0016491 (1.6%)" removal of superoxide radicals (32.8%) cytoplasm (32.8%) "thioredoxin-disulfide reductase (NADPH) activity (32.8%) oxidoreductase activity (1.6%)" "IPR036188 (20.4%) IPR050097 (20.4%) IPR005982 (19.4%)" "FAD/NAD(P)-binding domain superfamily (20.4%) Ferredoxin--NADP reductase type 2 (20.4%) Thioredoxin reductase (19.4%)" AIKPVNEADTEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (25.1%) "GO:0003746 (25.1%) GO:0005525 (25.1%) GO:0003924 (24.6%)" ribosome disassembly (25.1%) "translation elongation factor activity (25.1%) GTP binding (25.1%) GTPase activity (24.6%)" "IPR000640 (7.4%) IPR005517 (7.4%) IPR009000 (7.4%)" "Elongation factor EFG, domain V-like (7.4%) Translation elongation factor EFG/EF2, domain IV (7.4%) Translation protein, beta-barrel domain superfamily (7.4%)" MMNSNQFDAENEAIR ETLFEEETKPGLTGYDKGVITELGAVNVMTGIYTGR TLTISDNGVGMTRDEVIDHLGTIAK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006457 (0.1%) GO:0006974 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (19.3%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0005524 (19.7%) GO:0016887 (19.7%) GO:0051082 (19.7%)" "protein folding (0.1%) DNA damage response (0.1%) response to heat (0.1%)" "cytoplasm (19.3%) cytosol (0.1%) plasma membrane (0.1%)" "ATP binding (19.7%) ATP hydrolysis activity (19.7%) unfolded protein binding (19.7%)" "IPR001404 (14.9%) IPR020575 (14.9%) IPR036890 (14.9%)" "Heat shock protein Hsp90 family (14.9%) Heat shock protein Hsp90, N-terminal (14.9%) Histidine kinase/HSP90-like ATPase superfamily (14.9%)" ELPAGIVIPYNKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" KKMPIGVMVTLRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (17%) "GO:0005840 (17%) GO:1990904 (16.9%) GO:0022625 (0.1%)" "GO:0003735 (17%) GO:0000049 (16%) GO:0019843 (16%)" translation (17%) "ribosome (17%) ribonucleoprotein complex (16.9%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (17%) tRNA binding (16%) rRNA binding (16%)" "IPR002132 (20%) IPR022803 (20%) IPR031309 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5 domain superfamily (20%) Large ribosomal subunit protein uL5, C-terminal (20%)" AHCFFHQVEALYVDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004826 (16.7%) GO:0005524 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) phenylalanine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002319 (14.5%) IPR004188 (14.5%) IPR006195 (14.5%)" "Phenylalanyl-tRNA synthetase (14.5%) Phenylalanine-tRNA ligase, class II, N-terminal (14.5%) Aminoacyl-tRNA synthetase, class II (14.5%)" SQAEEKEAVACGYWHLWR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.7.1 (83.3%) 1.2.7.- (16.7%)" "pyruvate synthase (83.3%) With an iron-sulfur protein as acceptor (16.7%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (13%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (13%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" DRKEPYELGDNESHLCFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.4.1.5 (100%) lactoylglutathione lyase (100%) GO:0019243 (27.3%) GO:0005737 (27.3%) "GO:0004462 (36.4%) GO:0016829 (9.1%)" methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (27.3%) cytoplasm (27.3%) "lactoylglutathione lyase activity (36.4%) lyase activity (9.1%)" "IPR004360 (33.3%) IPR029068 (33.3%) IPR037523 (33.3%)" "Glyoxalase/fosfomycin resistance/dioxygenase domain (33.3%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (33.3%) Vicinal oxygen chelate (VOC), core domain (33.3%)" GYNKIEDLPEDVLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (14%) GO:0006526 (14%) GO:0006541 (14%)" GO:0005737 (14%) "GO:0004088 (14%) GO:0005524 (14%) GO:0046872 (14%)" "pyrimidine nucleotide biosynthetic process (14%) L-arginine biosynthetic process (14%) glutamine metabolic process (14%)" cytoplasm (14%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14%) ATP binding (14%) metal ion binding (14%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" TDVYENLHAAGVVDPAKVTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.4%) GO:0005737 (15.9%) "GO:0005524 (17.4%) GO:0140662 (17.4%) GO:0016853 (15.9%)" protein refolding (17.4%) cytoplasm (15.9%) "ATP binding (17.4%) ATP-dependent protein folding chaperone (17.4%) isomerase activity (15.9%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" CSANPIIPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.4.1.- (66.7%) 2.4.1.319 (33.3%)" "Hexosyltransferases (66.7%) beta-1,4-mannooligosaccharide phosphorylase (33.3%)" "GO:0016757 (68.9%) GO:0016798 (27.9%) GO:0016787 (3.3%)" "glycosyltransferase activity (68.9%) hydrolase activity, acting on glycosyl bonds (27.9%) hydrolase activity (3.3%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" YGMNSTCGLIVNSSR Bacteroidota Bacteria Pseudomonadati Bacteroidota 4.1.1.23 (100%) orotidine-5'-phosphate decarboxylase (100%) "GO:0006207 (32.9%) GO:0044205 (32.4%) GO:0009220 (0.9%)" "GO:0004590 (33.2%) GO:0016829 (0.6%)" "'de novo' pyrimidine nucleobase biosynthetic process (32.9%) 'de novo' UMP biosynthetic process (32.4%) pyrimidine ribonucleotide biosynthetic process (0.9%)" "orotidine-5'-phosphate decarboxylase activity (33.2%) lyase activity (0.6%)" "IPR011060 (25.1%) IPR011995 (25.1%) IPR013785 (25.1%)" "Ribulose-phosphate binding barrel (25.1%) Orotidine 5'-phosphate decarboxylase, type 2 (25.1%) Aldolase-type TIM barrel (25.1%)" KGGNHEEQVILDTLNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.13.2.1 (95.8%) 3.3.1.1 (4.2%)" "adenosylhomocysteinase (95.8%) Transferred entry: 3.13.2.1 (4.2%)" "GO:0006730 (20%) GO:0033353 (20%) GO:0071269 (20%)" GO:0005829 (20%) GO:0004013 (20%) "one-carbon metabolic process (20%) S-adenosylmethionine cycle (20%) L-homocysteine biosynthetic process (20%)" cytosol (20%) adenosylhomocysteinase activity (20%) "IPR000043 (20%) IPR015878 (20%) IPR020082 (20%)" "Adenosylhomocysteinase-like (20%) S-adenosyl-L-homocysteine hydrolase, NAD binding domain (20%) S-adenosyl-L-homocysteine hydrolase, conserved site (20%)" EADIVAQAGQK Bacteria Bacteria 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.2%) GO:0017038 (11.2%) GO:0043952 (11.2%)" "GO:0005829 (11.2%) GO:0005886 (11.2%) GO:0031522 (11.2%)" "GO:0005524 (11.2%) GO:0046872 (10.2%) GO:0008564 (0.5%)" "protein targeting (11.2%) protein import (11.2%) protein transport by the Sec complex (11.2%)" "cytosol (11.2%) plasma membrane (11.2%) cell envelope Sec protein transport complex (11.2%)" "ATP binding (11.2%) metal ion binding (10.2%) protein-exporting ATPase activity (0.5%)" "IPR000185 (7.9%) IPR001650 (7.9%) IPR011115 (7.9%)" "Protein translocase subunit SecA (7.9%) Helicase, C-terminal domain-like (7.9%) SecA DEAD-like, N-terminal (7.9%)" AEYTPHVDTGDYIIVLNADK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.8%) GO:0017148 (19.8%) GO:0002181 (0%)" "GO:0022625 (19.8%) GO:0005840 (0.6%) GO:0005737 (0.1%)" "GO:0003735 (19.9%) GO:0003729 (19.8%) GO:0008270 (0%)" "translation (19.8%) negative regulation of translation (19.8%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (19.8%) ribosome (0.6%) cytoplasm (0.1%)" "structural constituent of ribosome (19.9%) mRNA binding (19.8%) zinc ion binding (0%)" "IPR005822 (25%) IPR005823 (25%) IPR036899 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13 superfamily (25%)" AALIDCLAPDR Bacteria Bacteria "GO:0034220 (22%) GO:0006811 (2.5%) GO:0006974 (0%)" "GO:0009279 (24.7%) GO:0046930 (24.6%) GO:0016020 (0.1%)" "GO:0015288 (24.6%) GO:0016740 (1.2%) GO:0015075 (0%)" "monoatomic ion transmembrane transport (22%) monoatomic ion transport (2.5%) DNA damage response (0%)" "cell outer membrane (24.7%) pore complex (24.6%) membrane (0.1%)" "porin activity (24.6%) transferase activity (1.2%) monoatomic ion transmembrane transporter activity (0%)" "IPR006665 (12.7%) IPR036737 (12.7%) IPR050330 (12.6%)" "OmpA-like domain (12.7%) OmpA-like domain superfamily (12.7%) Bacterial Outer Membrane Structural/Functional (12.6%)" WSVDEPIIISTSDAESLKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0033178 (50%) GO:0046961 (50%) proton-transporting two-sector ATPase complex, catalytic domain (50%) proton-transporting ATPase activity, rotational mechanism (50%) IPR002842 (100%) V-type ATPase subunit E (100%) VLLVDKDGNVTVGAPTVDGAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR001787 (33.3%) IPR028909 (33.3%) IPR036164 (33.3%)" "Large ribosomal subunit protein bL21 (33.3%) Large ribosomal subunit protein bL21-like (33.3%) Large ribosomal subunit protein bL21-like superfamily (33.3%)" DTDGGTGFMHESFHKDNPSDYTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005975 (64.7%) GO:0016787 (35.3%) carbohydrate metabolic process (64.7%) hydrolase activity (35.3%) "IPR008313 (33.3%) IPR008928 (33.3%) IPR012341 (33.3%)" "Metal-independent alpha-mannosidase (33.3%) Six-hairpin glycosidase superfamily (33.3%) Six-hairpin glycosidase-like superfamily (33.3%)" IVNDTEIEGSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.1%) GO:0006516 (19.1%)" GO:0005829 (19.1%) "GO:0000224 (19.1%) GO:0030246 (19.1%) GO:0016798 (4.5%)" "carbohydrate metabolic process (19.1%) glycoprotein catabolic process (19.1%)" cytosol (19.1%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.1%) carbohydrate binding (19.1%) hydrolase activity, acting on glycosyl bonds (4.5%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" MGEVSALAEKLNCEVIPADATSVEDLENVFKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" YSQNAPLTMYDEVNTK Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20.2%) "GO:0046872 (20.6%) GO:0051539 (20.6%) GO:0004333 (20.2%)" tricarboxylic acid cycle (20.2%) "metal ion binding (20.6%) 4 iron, 4 sulfur cluster binding (20.6%) fumarate hydratase activity (20.2%)" "IPR004646 (16.9%) IPR051208 (16.9%) IPR004647 (16.6%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.9%) Class-I Fumarase/Tartrate Dehydratase (16.9%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.6%)" QADREGFPEVAEAYKR Bacteria Bacteria 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (48.9%) GO:0016491 (25.3%) GO:0004601 (15%)" "iron ion binding (48.9%) oxidoreductase activity (25.3%) peroxidase activity (15%)" "IPR003251 (12.8%) IPR009040 (12.8%) IPR052773 (12.8%)" "Rubrerythrin, diiron-binding domain (12.8%) Ferritin-like diiron domain (12.8%) Anaerobic Bacterial Peroxidase-Related (12.8%)" YQLIKENLVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" YAIVANDVRK root "1.16.-.- (99.5%) 1.16.3.1 (0.5%)" "Oxidizing metal ions (99.5%) ferroxidase (0.5%)" "GO:0006879 (14.5%) GO:0030261 (14.5%) GO:0006950 (0.1%)" "GO:0005737 (14.5%) GO:0009295 (12.1%) GO:0016020 (0.1%)" "GO:0008199 (14.7%) GO:0016722 (14.7%) GO:0003677 (14.5%)" "intracellular iron ion homeostasis (14.5%) chromosome condensation (14.5%) response to stress (0.1%)" "cytoplasm (14.5%) nucleoid (12.1%) membrane (0.1%)" "ferric iron binding (14.7%) oxidoreductase activity, acting on metal ions (14.7%) DNA binding (14.5%)" "IPR002177 (16.7%) IPR008331 (16.7%) IPR009078 (16.7%)" "DNA-binding protein Dps (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like superfamily (16.7%)" ILLNHFAADVENELK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" NMENLKSEFFIPLMVDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.13 (100%) glutamate synthase (NADPH) (100%) "GO:0016740 (96.8%) GO:0004355 (1.6%) GO:0016779 (1.6%)" "transferase activity (96.8%) glutamate synthase (NADPH) activity (1.6%) nucleotidyltransferase activity (1.6%)" "IPR029044 (99.2%) IPR005835 (0.8%)" "Nucleotide-diphospho-sugar transferases (99.2%) Nucleotidyl transferase domain (0.8%)" HYELIGFIDKYK Escherichia coli Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli "2.3.1.18 (66.7%) 1.2.4.1 (33.3%)" "galactoside O-acetyltransferase (66.7%) pyruvate dehydrogenase (acetyl-transferring) (33.3%)" "GO:0016747 (72.7%) GO:0008870 (18.2%) GO:0004739 (9.1%)" "acyltransferase activity, transferring groups other than amino-acyl groups (72.7%) galactoside O-acetyltransferase activity (18.2%) pyruvate dehydrogenase (acetyl-transferring) activity (9.1%)" "IPR011004 (20%) IPR018357 (20%) IPR020019 (20%)" "Trimeric LpxA-like superfamily (20%) Hexapeptide transferase, conserved site (20%) Acyltransferase PglD-like (20%)" KVEIPGVATTASPSSEVGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0006950 (100%) response to stress (100%) "IPR025543 (20.3%) IPR051096 (20.3%) IPR010854 (20.1%)" "Dodecin-like (20.3%) BhsA/McbA stress and biofilm-associated protein (20.3%) YdgH/BhsA/McbA-like domain (20.1%)" TMIEHSCELVEFAPNEFVPGTVVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0006354 (50%) GO:0031564 (50%)" "DNA-templated transcription elongation (50%) transcription antitermination (50%)" "IPR006645 (33.3%) IPR036735 (33.3%) IPR043425 (33.3%)" "NusG-like, N-terminal (33.3%) NusG, N-terminal domain superfamily (33.3%) NusG-like (33.3%)" VMEKQEPPIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002319 (14.6%) IPR004188 (14.6%) IPR006195 (14.6%)" "Phenylalanyl-tRNA synthetase (14.6%) Phenylalanine-tRNA ligase, class II, N-terminal (14.6%) Aminoacyl-tRNA synthetase, class II (14.6%)" ASMPGMMDTILNLGLNDEVVEGLSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25.1%) GO:0016301 (25.1%) GO:0050242 (25.1%)" "ATP binding (25.1%) kinase activity (25.1%) pyruvate, phosphate dikinase activity (25.1%)" "IPR002192 (10.1%) IPR010121 (10.1%) IPR013815 (10.1%)" "Pyruvate phosphate dikinase, AMP/ATP-binding (10.1%) Pyruvate, phosphate dikinase (10.1%) ATP-grasp fold, subdomain 1 (10.1%)" LIEEMGIGHYPVCIAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.4.3 (100%) formate--tetrahydrofolate ligase (100%) GO:0035999 (33.3%) "GO:0004329 (33.3%) GO:0005524 (33.3%)" tetrahydrofolate interconversion (33.3%) "formate-tetrahydrofolate ligase activity (33.3%) ATP binding (33.3%)" "IPR000559 (33.3%) IPR020628 (33.3%) IPR027417 (33.3%)" "Formate-tetrahydrofolate ligase, FTHFS (33.3%) Formate-tetrahydrofolate ligase, FTHFS, conserved site (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" GQVLAKPGTIKPHTK root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0%) GO:0046677 (0%)" "GO:0005829 (19%) GO:0032045 (8%) GO:0005886 (1%)" "GO:0003746 (19.4%) GO:0005525 (19.2%) GO:0003924 (11.4%)" "translational elongation (0%) response to antibiotic (0%)" "cytosol (19%) guanyl-nucleotide exchange factor complex (8%) plasma membrane (1%)" "translation elongation factor activity (19.4%) GTP binding (19.2%) GTPase activity (11.4%)" "IPR050055 (11.6%) IPR009000 (10.9%) IPR004160 (10.8%)" "Elongation factor Tu GTPase (11.6%) Translation protein, beta-barrel domain superfamily (10.9%) Translation elongation factor EFTu/EF1A, C-terminal (10.8%)" CPVYQNVDALPHTDPQEIKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) "GO:0004314 (94.7%) GO:0016746 (5.3%)" "[acyl-carrier-protein] S-malonyltransferase activity (94.7%) acyltransferase activity (5.3%)" "IPR001227 (14.3%) IPR004410 (14.3%) IPR014043 (14.3%)" "Acyl transferase domain superfamily (14.3%) Malonyl CoA-acyl carrier protein transacylase, FabD-type (14.3%) Acyl transferase domain (14.3%)" ARLEAEKEANKAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" LIESNTTIPTKKSETFTTAVDNQPSVEIHILQGER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005737 (21.3%) GO:0070013 (8.5%)" "GO:0005524 (23.4%) GO:0051082 (23.4%) GO:0140662 (23.4%)" "cytoplasm (21.3%) intracellular organelle lumen (8.5%)" "ATP binding (23.4%) unfolded protein binding (23.4%) ATP-dependent protein folding chaperone (23.4%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" VMNIPTVAIYTHVDR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "6.3.4.14 (70.6%) 6.4.1.7 (17.6%) 6.4.1.1 (5.9%)" "biotin carboxylase (70.6%) 2-oxoglutarate carboxylase (17.6%) pyruvate carboxylase (5.9%)" GO:2001295 (18.8%) "GO:0005524 (21.3%) GO:0046872 (21.3%) GO:0003989 (17.5%)" malonyl-CoA biosynthetic process (18.8%) "ATP binding (21.3%) metal ion binding (21.3%) acetyl-CoA carboxylase activity (17.5%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" DKLLHLEQELHLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0034605 (20%) GO:0042026 (20%)" GO:0005737 (20%) "GO:0005524 (20%) GO:0016887 (20%)" "cellular response to heat (20%) protein refolding (20%)" cytoplasm (20%) "ATP binding (20%) ATP hydrolysis activity (20%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" MNIGQILETHLGMAAK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.8%) GO:0006352 (0%) GO:0006412 (0%)" "GO:0000428 (20.1%) GO:0005829 (0%) GO:0000345 (0%)" "GO:0003677 (19.8%) GO:0003899 (19.8%) GO:0032549 (19.8%)" "DNA-templated transcription (19.8%) DNA-templated transcription initiation (0%) translation (0%)" "DNA-directed RNA polymerase complex (20.1%) cytosol (0%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA binding (19.8%) DNA-directed RNA polymerase activity (19.8%) ribonucleoside binding (19.8%)" "IPR007120 (8%) IPR015712 (8%) IPR037033 (8%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (8%) DNA-directed RNA polymerase, subunit 2 (8%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily (8%)" GKGFQGVVKR root "GO:0006412 (23.6%) GO:0000027 (0%) GO:0006364 (0%)" "GO:0022625 (16.9%) GO:0005840 (6.1%) GO:1990904 (6.1%)" "GO:0003735 (23.6%) GO:0019843 (22.9%) GO:0003723 (0.1%)" "translation (23.6%) ribosomal large subunit assembly (0%) rRNA processing (0%)" "cytosolic large ribosomal subunit (16.9%) ribosome (6.1%) ribonucleoprotein complex (6.1%)" "structural constituent of ribosome (23.6%) rRNA binding (22.9%) RNA binding (0.1%)" "IPR000597 (26.1%) IPR009000 (26%) IPR019927 (25.4%)" "Large ribosomal subunit protein uL3 (26.1%) Translation protein, beta-barrel domain superfamily (26%) Large ribosomal subunit protein uL3, bacteria/organella (25.4%)" VVTISGPDGYIYDPAGISGEKIDYMLELR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006537 (26.2%) GO:0005829 (23.8%) "GO:0004354 (26.2%) GO:0000166 (23.8%)" glutamate biosynthetic process (26.2%) cytosol (23.8%) "glutamate dehydrogenase (NADP+) activity (26.2%) nucleotide binding (23.8%)" "IPR006095 (12.5%) IPR006096 (12.5%) IPR006097 (12.5%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.5%)" GLKLEQATLEMLGTCDKVTVSKDNTTIVNGAGAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.1%) GO:0005737 (16.2%) "GO:0005524 (17.1%) GO:0140662 (17.1%) GO:0016853 (16.2%)" protein refolding (17.1%) cytoplasm (16.2%) "ATP binding (17.1%) ATP-dependent protein folding chaperone (17.1%) isomerase activity (16.2%)" "IPR001844 (17.1%) IPR002423 (17.1%) IPR018370 (17.1%)" "Chaperonin Cpn60/GroEL (17.1%) Chaperonin Cpn60/GroEL/TCP-1 family (17.1%) Chaperonin Cpn60, conserved site (17.1%)" IAEQCYLPANR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005975 (50%) "GO:0003824 (22.2%) GO:0016787 (22.2%) GO:0016798 (5.6%)" carbohydrate metabolic process (50%) "catalytic activity (22.2%) hydrolase activity (22.2%) hydrolase activity, acting on glycosyl bonds (5.6%)" "IPR004300 (33.3%) IPR011330 (33.3%) IPR052046 (33.3%)" "Glycoside hydrolase family 57, N-terminal domain (33.3%) Glycoside hydrolase/deacetylase, beta/alpha-barrel (33.3%) Glycosyl hydrolase family 57 (33.3%)" LGIAAQSVGLSQAAYNEGLAYAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.8.1 (60%) 1.3.99.- (20%) 1.3.8.- (15%)" "short-chain acyl-CoA dehydrogenase (60%) With other acceptors (20%) With a flavin as acceptor (15%)" "GO:0050660 (49.5%) GO:0003995 (45.6%) GO:0016937 (4.2%)" "flavin adenine dinucleotide binding (49.5%) acyl-CoA dehydrogenase activity (45.6%) short-chain fatty acyl-CoA dehydrogenase activity (4.2%)" "IPR009075 (9.2%) IPR009100 (9.2%) IPR036250 (9.2%)" "Acyl-CoA dehydrogenase/oxidase, C-terminal (9.2%) Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily (9.2%) Acyl-CoA dehydrogenase-like, C-terminal (9.2%)" NWACPGVTRPADYGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.1.3.11 (100%) N-succinylornithine carbamoyltransferase (100%) "GO:0019240 (25%) GO:0042450 (25%)" "GO:0004585 (25%) GO:0016597 (25%)" "citrulline biosynthetic process (25%) L-arginine biosynthetic process via ornithine (25%)" "ornithine carbamoyltransferase activity (25%) amino acid binding (25%)" "IPR006131 (20.8%) IPR006132 (20.8%) IPR006130 (19.5%)" "Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20.8%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20.8%) Aspartate/ornithine carbamoyltransferase (19.5%)" AIEQAFVQSPYVKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR012640 (50%) IPR025411 (50%)" "Membrane lipoprotein, lipid attachment site (50%) Domain of unknown function DUF4136 (50%)" NQYFDISAPWETGLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006826 (43.8%) GO:0009279 (50%) GO:0015344 (6.3%) iron ion transport (43.8%) cell outer membrane (50%) siderophore uptake transmembrane transporter activity (6.3%) "IPR008969 (12.9%) IPR012910 (12.9%) IPR023996 (12.9%)" "Carboxypeptidase-like, regulatory domain superfamily (12.9%) TonB-dependent receptor, plug domain (12.9%) TonB-dependent outer membrane protein, SusC/RagA (12.9%)" DTGRDALVVYDDLSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0045259 (19.7%) GO:0005886 (17.6%)" "GO:0005524 (19.7%) GO:0043531 (19.7%) GO:0046933 (19.7%)" "proton-transporting ATP synthase complex (19.7%) plasma membrane (17.6%)" "ATP binding (19.7%) ADP binding (19.7%) proton-transporting ATP synthase activity, rotational mechanism (19.7%)" "IPR000194 (10%) IPR000793 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) ATP synthase, alpha subunit, C-terminal (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" MLSFGGDHFVTLPLLR root "3.5.3.11 (99.9%) 3.5.3.- (0.1%)" "agmatinase (99.9%) In linear amidines (0.1%)" "GO:0033389 (25%) GO:0008295 (24.5%)" GO:0005829 (0%) "GO:0008783 (25%) GO:0030145 (23.3%) GO:0046872 (1.7%)" "putrescine biosynthetic process from arginine, via agmatine (25%) spermidine biosynthetic process (24.5%)" cytosol (0%) "agmatinase activity (25%) manganese ion binding (23.3%) metal ion binding (1.7%)" "IPR006035 (20.4%) IPR023696 (20.4%) IPR005925 (20.2%)" "Ureohydrolase (20.4%) Ureohydrolase domain superfamily (20.4%) Agmatinase-related (20.2%)" KFGEQLQAGNNNNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR021857 (100%) Protein of unknown function DUF3467 (100%) NIPTVLFIKDGEVKDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.8.4.2 (100%) protein-disulfide reductase (glutathione) (100%) GO:0045454 (33.3%) GO:0005829 (33.3%) "GO:0015035 (31%) GO:0019153 (2.4%)" cell redox homeostasis (33.3%) cytosol (33.3%) "protein-disulfide reductase activity (31%) protein-disulfide reductase (glutathione) activity (2.4%)" "IPR013766 (25.9%) IPR036249 (25.9%) IPR005746 (24.1%)" "Thioredoxin domain (25.9%) Thioredoxin-like superfamily (25.9%) Thioredoxin (24.1%)" NFVLDTNVILHDYNCLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25.1%) IPR003714 (25.1%) IPR051451 (25.1%)" "PIN domain (25.1%) PhoH-like protein (25.1%) PhoH2-like (25.1%)" IINEPTAAALAYGLDK root "3.6.4.10 (91%) 3.6.1.3 (3.2%) 1.3.1.74 (2%)" "non-chaperonin molecular chaperone ATPase (91%) Deleted entry (3.2%) 2-alkenal reductase [NAD(P)(+)] (2%)" "GO:0006950 (4.6%) GO:0009408 (1.2%) GO:0042026 (1.1%)" "GO:0005788 (4.6%) GO:0005737 (3.3%) GO:0005634 (1.2%)" "GO:0005524 (28.3%) GO:0140662 (28.3%) GO:0051082 (9.2%)" "response to stress (4.6%) response to heat (1.2%) protein refolding (1.1%)" "endoplasmic reticulum lumen (4.6%) cytoplasm (3.3%) nucleus (1.2%)" "ATP binding (28.3%) ATP-dependent protein folding chaperone (28.3%) unfolded protein binding (9.2%)" "IPR013126 (19.1%) IPR018181 (19%) IPR043129 (19%)" "Heat shock protein 70 family (19.1%) Heat shock protein 70, conserved site (19%) ATPase, nucleotide binding domain (19%)" LEVVTPEENMGDVIGDLNKRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.5%) GO:0005737 (18.5%) "GO:0003746 (20.7%) GO:0005525 (20.5%) GO:0003924 (19.8%)" ribosome disassembly (20.5%) cytoplasm (18.5%) "translation elongation factor activity (20.7%) GTP binding (20.5%) GTPase activity (19.8%)" "IPR000640 (6.4%) IPR005517 (6.4%) IPR014721 (6.4%)" "Elongation factor EFG, domain V-like (6.4%) Translation elongation factor EFG/EF2, domain IV (6.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.4%)" ASGNDIVAPYAEKYPNSTFVAGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (25%) GO:0005829 (25%) "GO:0000166 (25%) GO:0004354 (25%)" glutamate biosynthetic process (25%) cytosol (25%) "nucleotide binding (25%) glutamate dehydrogenase (NADP+) activity (25%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" IKEFGLFDIVFANINR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.1.1.- (100%) Methyltransferases (100%) GO:0032259 (25%) "GO:0005737 (25%) GO:0005840 (25%)" "GO:0008276 (20%) GO:0016279 (5%)" methylation (25%) "cytoplasm (25%) ribosome (25%)" "protein methyltransferase activity (20%) protein-lysine N-methyltransferase activity (5%)" "IPR004498 (33.3%) IPR029063 (33.3%) IPR050078 (33.3%)" "Ribosomal protein L11 methyltransferase (33.3%) S-adenosyl-L-methionine-dependent methyltransferase superfamily (33.3%) Ribosomal protein L11 methyltransferase PrmA (33.3%)" YEKVENGEPER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.5%) GO:0006044 (32.5%)" "GO:0004342 (32.5%) GO:0016853 (2.5%)" "carbohydrate metabolic process (32.5%) N-acetylglucosamine metabolic process (32.5%)" "glucosamine-6-phosphate deaminase activity (32.5%) isomerase activity (2.5%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" YAHKIPFVVK Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (48.5%) "GO:0004332 (51.2%) GO:0016829 (0.3%)" glycolytic process (48.5%) "fructose-bisphosphate aldolase activity (51.2%) lyase activity (0.3%)" "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" VATEFSETAPATLK root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.6%) GO:0006094 (16.6%) GO:0008615 (0%)" "GO:0005829 (16.6%) GO:0005737 (0%)" "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "glycolytic process (16.6%) gluconeogenesis (16.6%) pyridoxine biosynthetic process (0%)" "cytosol (16.6%) cytoplasm (0%)" "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (25.3%) IPR015824 (25.3%) IPR036043 (25.3%)" "Phosphoglycerate kinase (25.3%) Phosphoglycerate kinase, N-terminal (25.3%) Phosphoglycerate kinase superfamily (25.3%)" QKYADQKPLKGAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.13.2.1 (94.4%) 3.3.1.1 (5.6%)" "adenosylhomocysteinase (94.4%) Transferred entry: 3.13.2.1 (5.6%)" "GO:0006730 (20%) GO:0033353 (20%) GO:0071269 (20%)" GO:0005829 (20%) GO:0004013 (20%) "one-carbon metabolic process (20%) S-adenosylmethionine cycle (20%) L-homocysteine biosynthetic process (20%)" cytosol (20%) adenosylhomocysteinase activity (20%) "IPR000043 (20%) IPR015878 (20%) IPR020082 (20%)" "Adenosylhomocysteinase-like (20%) S-adenosyl-L-homocysteine hydrolase, NAD binding domain (20%) S-adenosyl-L-homocysteine hydrolase, conserved site (20%)" GVSASKEDVHNAIK root 6.3.3.1 (100%) phosphoribosylformylglycinamidine cyclo-ligase (100%) "GO:0006189 (16.7%) GO:0046084 (16.7%) GO:0006164 (0%)" GO:0005829 (16.7%) "GO:0004641 (16.7%) GO:0004637 (16.7%) GO:0005524 (16.5%)" "'de novo' IMP biosynthetic process (16.7%) adenine biosynthetic process (16.7%) purine nucleotide biosynthetic process (0%)" cytosol (16.7%) "phosphoribosylformylglycinamidine cyclo-ligase activity (16.7%) phosphoribosylamine-glycine ligase activity (16.7%) ATP binding (16.5%)" "IPR004733 (20.1%) IPR016188 (20.1%) IPR036921 (20.1%)" "Phosphoribosylformylglycinamidine cyclo-ligase (20.1%) PurM-like, N-terminal domain (20.1%) PurM-like, N-terminal domain superfamily (20.1%)" LSAFDQVITTADLLDEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.9%) GO:0005829 (16.9%) "GO:0003723 (16.9%) GO:0004831 (16.9%) GO:0005524 (16.9%)" tyrosyl-tRNA aminoacylation (16.9%) cytosol (16.9%) "RNA binding (16.9%) tyrosine-tRNA ligase activity (16.9%) ATP binding (16.9%)" "IPR001412 (12.8%) IPR002305 (12.8%) IPR002307 (12.8%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.8%) Aminoacyl-tRNA synthetase, class Ic (12.8%) Tyrosine-tRNA ligase (12.8%)" ELTKYPVATR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20.2%) "GO:0004333 (20.2%) GO:0046872 (20.2%) GO:0051539 (20.2%)" tricarboxylic acid cycle (20.2%) "fumarate hydratase activity (20.2%) metal ion binding (20.2%) 4 iron, 4 sulfur cluster binding (20.2%)" "IPR004647 (16.9%) IPR036660 (16.9%) IPR051208 (16.9%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.9%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (16.9%) Class-I Fumarase/Tartrate Dehydratase (16.9%)" FSTDLPEFAAAEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (19.9%) GO:0005886 (19.9%) "GO:0009055 (19.9%) GO:0050660 (19.9%) GO:0000104 (16%)" anaerobic respiration (19.9%) plasma membrane (19.9%) "electron transfer activity (19.9%) flavin adenine dinucleotide binding (19.9%) succinate dehydrogenase activity (16%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" LINSVQNYAWGSK Bacteria Bacteria 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) "GO:0009298 (20%) GO:0005975 (19.8%) GO:0009242 (0%)" GO:0005829 (19.9%) "GO:0004476 (20%) GO:0008270 (20%) GO:0016853 (0.4%)" "GDP-mannose biosynthetic process (20%) carbohydrate metabolic process (19.8%) colanic acid biosynthetic process (0%)" cytosol (19.9%) "mannose-6-phosphate isomerase activity (20%) zinc ion binding (20%) isomerase activity (0.4%)" "IPR046457 (12.6%) IPR016305 (12.6%) IPR011051 (12.6%)" "Phosphomannose isomerase type I, catalytic domain (12.6%) Mannose-6-phosphate isomerase (12.6%) RmlC-like cupin domain superfamily (12.6%)" LSTQKSDENQILLEGVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.- (100%) Transaminases (100%) GO:0000105 (31.3%) "GO:0030170 (31.3%) GO:0008483 (18.8%) GO:0004400 (12.5%)" L-histidine biosynthetic process (31.3%) "pyridoxal phosphate binding (31.3%) transaminase activity (18.8%) histidinol-phosphate transaminase activity (12.5%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" IIELLGNQAEYYLNHTCK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (48.8%) "GO:0004332 (48.8%) GO:0016829 (2.4%)" glycolytic process (48.8%) "fructose-bisphosphate aldolase activity (48.8%) lyase activity (2.4%)" "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" GVHILFDKENVNNTLGEFLANVGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" RILLSSLEGFAITTIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.7%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.7%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011260 (16.7%) IPR011262 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.7%) DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" GDLGIEVPQER Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.1.40 (100%) pyruvate kinase (100%) "GO:0006950 (13.8%) GO:0006096 (0.1%)" "GO:0005737 (0.1%) GO:0005829 (0.1%)" "GO:0016301 (17.3%) GO:0000287 (17.1%) GO:0004743 (17.1%)" "response to stress (13.8%) glycolytic process (0.1%)" "cytoplasm (0.1%) cytosol (0.1%)" "kinase activity (17.3%) magnesium ion binding (17.1%) pyruvate kinase activity (17.1%)" "IPR001697 (11.1%) IPR015793 (11.1%) IPR015813 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase, barrel (11.1%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (11.1%)" NPIIVGSSGLTNKAER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.3.1.1 (100%) dihydrouracil dehydrogenase (NAD(+)) (100%) "GO:0006210 (13%) GO:0006212 (13%) GO:0044205 (8.7%)" GO:0005737 (15.2%) "GO:0002058 (13%) GO:0004152 (13%) GO:0050661 (13%)" "thymine catabolic process (13%) uracil catabolic process (13%) 'de novo' UMP biosynthetic process (8.7%)" cytoplasm (15.2%) "uracil binding (13%) dihydroorotate dehydrogenase activity (13%) NADP binding (13%)" "IPR005720 (31.8%) IPR012135 (31.8%) IPR013785 (31.8%)" "Dihydroorotate dehydrogenase, catalytic (31.8%) Dihydroorotate dehydrogenase, class 1/ 2 (31.8%) Aldolase-type TIM barrel (31.8%)" KLTPEQAEQIK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.5.1.34 (55.6%) 1.-.-.- (44.4%)" "6,7-dihydropteridine reductase (55.6%) Oxidoreductases (44.4%)" GO:0046256 (27.9%) "GO:0005829 (27.9%) GO:0016020 (0.2%)" "GO:0046857 (27.6%) GO:0004155 (13.7%) GO:0016491 (1.8%)" 2,4,6-trinitrotoluene catabolic process (27.9%) "cytosol (27.9%) membrane (0.2%)" "oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor (27.6%) 6,7-dihydropteridine reductase activity (13.7%) oxidoreductase activity (1.8%)" "IPR000415 (25.9%) IPR029479 (25.9%) IPR050627 (24.4%)" "Nitroreductase-like (25.9%) Nitroreductase (25.9%) Nitroreductase/BluB (24.4%)" IGMTSVFSADGK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (25.1%) IPR009000 (25.1%) IPR019927 (25.1%)" "Large ribosomal subunit protein uL3 (25.1%) Translation protein, beta-barrel domain superfamily (25.1%) Large ribosomal subunit protein uL3, bacteria/organella (25.1%)" ILQEHKIEKLPVVDKEGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" SIDESLLQAAIYNHHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (12%) GO:0044210 (12%)" "GO:0005829 (12%) GO:0097268 (12%)" "GO:0003883 (12%) GO:0005524 (12%) GO:0042802 (12%)" "pyrimidine nucleobase biosynthetic process (12%) 'de novo' CTP biosynthetic process (12%)" "cytosol (12%) cytoophidium (12%)" "CTP synthase activity (12%) ATP binding (12%) identical protein binding (12%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" TRLDEAGIGDDTIEEIVRR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.1.1.1 (71.4%) 1.1.1.- (28.6%)" "alcohol dehydrogenase (71.4%) With NAD(+) or NADP(+) as acceptor (28.6%)" GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (16.7%) IPR011322 (16.7%) IPR018211 (16.7%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (16.7%) Nitrogen regulatory PII-like, alpha/beta (16.7%) Alcohol dehydrogenase, iron-type, conserved site (16.7%)" YVILGHSER root "5.3.1.1 (99.5%) 2.7.2.3 (0.4%) 1.2.1.12 (0%)" "triose-phosphate isomerase (99.5%) phosphoglycerate kinase (0.4%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (0%)" "GO:0006094 (16.5%) GO:0006096 (16.5%) GO:0019563 (16.4%)" "GO:0005829 (16.5%) GO:0016020 (0.4%) GO:0020015 (0%)" "GO:0004807 (16.5%) GO:0005524 (0.1%) GO:0004618 (0.1%)" "gluconeogenesis (16.5%) glycolytic process (16.5%) glycerol catabolic process (16.4%)" "cytosol (16.5%) membrane (0.4%) glycosome (0%)" "triose-phosphate isomerase activity (16.5%) ATP binding (0.1%) phosphoglycerate kinase activity (0.1%)" "IPR000652 (20.7%) IPR013785 (20.7%) IPR035990 (20.7%)" "Triosephosphate isomerase (20.7%) Aldolase-type TIM barrel (20.7%) Triosephosphate isomerase superfamily (20.7%)" HSQVFSTAEDNQSAVTIHVIQGER root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0051301 (0.2%) GO:0006260 (0.1%) GO:0042026 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0005524 (25.7%) GO:0140662 (25.7%) GO:0051082 (24.2%)" "cell division (0.2%) DNA replication (0.1%) protein refolding (0.1%)" "cytosol (0.1%) cytoplasm (0%) plasma membrane (0%)" "ATP binding (25.7%) ATP-dependent protein folding chaperone (25.7%) unfolded protein binding (24.2%)" "IPR013126 (17.1%) IPR029047 (17%) IPR029048 (16.8%)" "Heat shock protein 70 family (17.1%) Heat shock protein 70kD, peptide-binding domain superfamily (17%) Heat shock protein 70kD, C-terminal domain superfamily (16.8%)" QDVPSFRPGDTVEVK root "GO:0006412 (32.3%) GO:0000027 (0.1%) GO:0002181 (0.1%)" "GO:0022625 (31.8%) GO:0005840 (2%) GO:0005829 (0.7%)" "GO:0003735 (32.5%) GO:0070180 (0.1%)" "translation (32.3%) ribosomal large subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic large ribosomal subunit (31.8%) ribosome (2%) cytosol (0.7%)" "structural constituent of ribosome (32.5%) large ribosomal subunit rRNA binding (0.1%)" "IPR001857 (25.4%) IPR008991 (25.4%) IPR038657 (24.9%)" "Large ribosomal subunit protein bL19 (25.4%) Translation protein SH3-like domain superfamily (25.4%) Large ribosomal subunit protein bL19 superfamily (24.9%)" VLSVEELLYAATLTNDNAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (51.1%) IPR019734 (48.9%)" "Tetratricopeptide-like helical domain superfamily (51.1%) Tetratricopeptide repeat (48.9%)" MAFEQAAASNANLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0051301 (100%) cell division (100%) "IPR011990 (26.8%) IPR019734 (26.8%) IPR006597 (22%)" "Tetratricopeptide-like helical domain superfamily (26.8%) Tetratricopeptide repeat (26.8%) Sel1-like repeat (22%)" IEATDLPTIPFGDSEKLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.4.21.107 (66.7%) 3.4.21.- (33.3%)" "peptidase Do (66.7%) Serine endopeptidases (33.3%)" GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001478 (17%) IPR001940 (17%) IPR009003 (17%)" "PDZ domain (17%) Peptidase S1C (17%) Peptidase S1, PA clan (17%)" KHGAGPIILQSHGDPSEPISFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0016787 (92.3%) GO:0046872 (7.7%)" "hydrolase activity (92.3%) metal ion binding (7.7%)" IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) KFQLAENIHVR root "GO:0050821 (49.7%) GO:0009408 (0.1%) GO:0017148 (0.1%)" "GO:0005737 (49.7%) GO:0005829 (0.1%)" "GO:0042802 (0.1%) GO:0042803 (0.1%) GO:0048027 (0.1%)" "protein stabilization (49.7%) response to heat (0.1%) negative regulation of translation (0.1%)" "cytoplasm (49.7%) cytosol (0.1%)" "identical protein binding (0.1%) protein homodimerization activity (0.1%) mRNA 5'-UTR binding (0.1%)" "IPR002068 (25.2%) IPR008978 (25.2%) IPR037913 (24.9%)" "Alpha crystallin/Hsp20 domain (25.2%) HSP20-like chaperone (25.2%) Small heat shock protein IbpA/IbpB, ACD domain (24.9%)" SLEDLPEAEKAAEEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (25%) GO:0006166 (25%)" "GO:0000287 (25%) GO:0008973 (25%)" "carbohydrate metabolic process (25%) purine ribonucleoside salvage (25%)" "magnesium ion binding (25%) phosphopentomutase activity (25%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" MLKESDALHTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.29 (97.2%) 2.3.1.50 (2.8%)" "glycine C-acetyltransferase (97.2%) serine C-palmitoyltransferase (2.8%)" "GO:0030148 (14%) GO:0019518 (13.6%) GO:0006567 (0.9%)" "GO:0005829 (14.5%) GO:0016020 (14%)" "GO:0008890 (14.5%) GO:0030170 (14.5%) GO:0004758 (8.3%)" "sphingolipid biosynthetic process (14%) L-threonine catabolic process to glycine (13.6%) L-threonine catabolic process (0.9%)" "cytosol (14.5%) membrane (14%)" "glycine C-acetyltransferase activity (14.5%) pyridoxal phosphate binding (14.5%) serine C-palmitoyltransferase activity (8.3%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" SGAYHCTTIVDCNTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005980 (33.1%) GO:0005975 (0.8%)" "GO:0004134 (33.1%) GO:0004135 (33.1%)" "glycogen catabolic process (33.1%) carbohydrate metabolic process (0.8%)" "4-alpha-glucanotransferase activity (33.1%) amylo-alpha-1,6-glucosidase activity (33.1%)" "IPR024742 (20.5%) IPR008928 (20.2%) IPR010401 (19.7%)" "Glycogen debranching enzyme, bacterial and archaeal type, N-terminal (20.5%) Six-hairpin glycosidase superfamily (20.2%) Glycogen debranching enzyme (19.7%)" IGPTAALAALDVMEKEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0008483 (50%) GO:0030170 (50%)" "transaminase activity (50%) pyridoxal phosphate binding (50%)" "IPR005814 (25%) IPR015421 (25%) IPR015422 (25%)" "Aminotransferase class-III (25%) Pyridoxal phosphate-dependent transferase, major domain (25%) Pyridoxal phosphate-dependent transferase, small domain (25%)" VAGELLPGVFHVSAR Bacillota Bacteria Bacillati Bacillota "1.2.7.1 (93.2%) 1.2.7.- (6.8%)" "pyruvate synthase (93.2%) With an iron-sulfur protein as acceptor (6.8%)" "GO:0006979 (16.7%) GO:0022900 (16.4%)" "GO:0051539 (16.7%) GO:0005506 (16.4%) GO:0030976 (16%)" "response to oxidative stress (16.7%) electron transport chain (16.4%)" "4 iron, 4 sulfur cluster binding (16.7%) iron ion binding (16.4%) thiamine pyrophosphate binding (16%)" "IPR002880 (7.8%) IPR019752 (7.8%) IPR033412 (7.8%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.8%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (7.8%) Pyruvate:ferredoxin oxidoreductase, core domain II (7.8%)" SRGFGFVELSDDELAKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0003723 (100%) RNA binding (100%) "IPR000504 (20%) IPR012677 (20%) IPR035979 (20%)" "RNA recognition motif domain (20%) Nucleotide-binding alpha-beta plait domain superfamily (20%) RNA-binding domain superfamily (20%)" AGINVWELIELANKHPR Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.1.1.336 (81.8%) 1.1.1.22 (12.7%) 1.1.1.136 (5.5%)" "UDP-N-acetyl-D-mannosamine dehydrogenase (81.8%) UDP-glucose 6-dehydrogenase (12.7%) UDP-N-acetylglucosamine 6-dehydrogenase (5.5%)" GO:0000271 (24.7%) "GO:0016628 (24.7%) GO:0051287 (24.7%) GO:0016616 (16.1%)" polysaccharide biosynthetic process (24.7%) "oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (24.7%) NAD binding (24.7%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (16.1%)" "IPR008927 (12.6%) IPR014026 (12.6%) IPR017476 (12.6%)" "6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (12.6%) UDP-glucose/GDP-mannose dehydrogenase, dimerisation (12.6%) UDP-glucose/GDP-mannose dehydrogenase (12.6%)" SFTQDDAHIFCRPDQVKGEFLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004829 (16.7%) GO:0005524 (16.7%)" threonyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) threonine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" SNHVTLFVDTLSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (24.4%) "GO:0022625 (21.8%) GO:0005840 (2.6%) GO:1990904 (2.6%)" "GO:0003735 (24.4%) GO:0019843 (24.4%)" translation (24.4%) "cytosolic large ribosomal subunit (21.8%) ribosome (2.6%) ribonucleoprotein complex (2.6%)" "structural constituent of ribosome (24.4%) rRNA binding (24.4%)" "IPR001063 (26.4%) IPR036394 (26.4%) IPR005727 (23.6%)" "Large ribosomal subunit protein uL22 (26.4%) Ribosomal protein uL22 superfamily (26.4%) Large ribosomal subunit protein uL22, bacterial/chloroplast-type (23.6%)" SISSQIESIEHINSGLNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016020 (100%) membrane (100%) "IPR019852 (50%) IPR055087 (50%)" "Gliding motility-associated protein, GldL (50%) Gliding motility protein GldL-like, N-terminal domain (50%)" GVFAAGDCTTVPYK root "1.8.1.- (88.8%) 1.6.4.- (5%) 1.6.99.3 (3.1%)" "With NAD(+) or NADP(+) as acceptor (88.8%) With a disulfide as acceptor (5%) Deleted entry (3.1%)" "GO:0000302 (14%) GO:0045454 (0%) GO:0006979 (0%)" "GO:0005829 (14.3%) GO:0032991 (14.3%) GO:0009321 (0%)" "GO:0016668 (14.2%) GO:0050660 (14.1%) GO:0051287 (14%)" "response to reactive oxygen species (14%) cell redox homeostasis (0%) response to oxidative stress (0%)" "cytosol (14.3%) protein-containing complex (14.3%) alkyl hydroperoxide reductase complex (0%)" "oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (14.2%) flavin adenine dinucleotide binding (14.1%) NAD binding (14%)" "IPR023753 (11.6%) IPR036188 (11.6%) IPR050097 (11.6%)" "FAD/NAD(P)-binding domain (11.6%) FAD/NAD(P)-binding domain superfamily (11.6%) Ferredoxin--NADP reductase type 2 (11.6%)" VVGQLGQVLGPR root "GO:0006417 (16.7%) GO:0006412 (16.5%) GO:0000027 (0%)" "GO:0022625 (16.8%) GO:0005840 (0.2%) GO:0000428 (0%)" "GO:0000049 (16.5%) GO:0003735 (16.5%) GO:0019843 (16.5%)" "regulation of translation (16.7%) translation (16.5%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (16.8%) ribosome (0.2%) DNA-directed RNA polymerase complex (0%)" "tRNA binding (16.5%) structural constituent of ribosome (16.5%) rRNA binding (16.5%)" "IPR028364 (16.8%) IPR023673 (16.7%) IPR023674 (16.7%)" "Ribosomal protein uL1/ribosomal biogenesis protein (16.8%) Large ribosomal subunit protein uL1, conserved site (16.7%) Ribosomal protein uL1-like (16.7%)" NQQLLCHMPSDMKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.5.1.3 (100%) dihydrofolate reductase (100%) "GO:0006730 (14%) GO:0046452 (14%) GO:0046654 (14%)" GO:0005829 (14%) "GO:0004146 (14%) GO:0050661 (14%) GO:0016301 (1.8%)" "one-carbon metabolic process (14%) dihydrofolate metabolic process (14%) tetrahydrofolate biosynthetic process (14%)" cytosol (14%) "dihydrofolate reductase activity (14%) NADP binding (14%) kinase activity (1.8%)" "IPR001796 (33.3%) IPR012259 (33.3%) IPR024072 (33.3%)" "Dihydrofolate reductase domain (33.3%) Dihydrofolate reductase (33.3%) Dihydrofolate reductase-like domain superfamily (33.3%)" FVFEQADGVKPIDIKLEYMFGKPPR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" TDKNSEPDPVYIKEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.1%) GO:0009090 (17.1%) GO:0009088 (14.4%)" GO:0005829 (17.1%) "GO:0004072 (17.1%) GO:0005524 (17.1%)" "lysine biosynthetic process via diaminopimelate (17.1%) homoserine biosynthetic process (17.1%) threonine biosynthetic process (14.4%)" cytosol (17.1%) "aspartate kinase activity (17.1%) ATP binding (17.1%)" "IPR001048 (12.8%) IPR001341 (12.8%) IPR005260 (12.8%)" "Aspartate/glutamate/uridylate kinase (12.8%) Aspartate kinase (12.8%) Aspartate kinase, monofunctional class (12.8%)" QAIVNEEAGTTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) GO:0042254 (30.3%) "GO:0005525 (30.9%) GO:0043022 (30.9%) GO:0016787 (7.8%)" ribosome biogenesis (30.3%) "GTP binding (30.9%) ribosome binding (30.9%) hydrolase activity (7.8%)" "IPR005225 (14.5%) IPR006073 (14.5%) IPR027417 (14.5%)" "Small GTP-binding domain (14.5%) GTP binding domain (14.5%) P-loop containing nucleoside triphosphate hydrolase (14.5%)" FGSSISGSHVAIDDIEGAWNSSTQYEGGNKGHRPAVK root 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (14.5%) GO:0019740 (14.5%) GO:0009314 (0.1%)" "GO:0005737 (14.5%) GO:0016020 (14.5%) GO:0005829 (0.1%)" "GO:0004356 (14.6%) GO:0005524 (13.4%) GO:0046872 (13.2%)" "glutamine biosynthetic process (14.5%) nitrogen utilization (14.5%) response to radiation (0.1%)" "cytoplasm (14.5%) membrane (14.5%) cytosol (0.1%)" "glutamine synthetase activity (14.6%) ATP binding (13.4%) metal ion binding (13.2%)" "IPR008146 (13%) IPR014746 (13%) IPR008147 (12.9%)" "Glutamine synthetase, catalytic domain (13%) Glutamine synthetase/guanido kinase, catalytic domain (13%) Glutamine synthetase, N-terminal domain (12.9%)" NIGFDDSFIYDELELKPENR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.4.3 (100%) guanine deaminase (100%) GO:0006152 (31.7%) "GO:0008270 (31.7%) GO:0047974 (31.7%) GO:0008892 (4.8%)" purine nucleoside catabolic process (31.7%) "zinc ion binding (31.7%) guanosine deaminase activity (31.7%) guanine deaminase activity (4.8%)" "IPR002125 (33.3%) IPR016192 (33.3%) IPR016193 (33.3%)" "Cytidine and deoxycytidylate deaminase domain (33.3%) APOBEC/CMP deaminase, zinc-binding (33.3%) Cytidine deaminase-like (33.3%)" IGEGNTGLNTGGMGAVSPVPFADEVFMAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0006189 (20%) GO:0009113 (20%)" "GO:0004637 (20%) GO:0005524 (20%) GO:0046872 (20%)" "'de novo' IMP biosynthetic process (20%) purine nucleobase biosynthetic process (20%)" "phosphoribosylamine-glycine ligase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000115 (11.1%) IPR011054 (11.1%) IPR011761 (11.1%)" "Phosphoribosylglycinamide synthetase (11.1%) Rudiment single hybrid motif (11.1%) ATP-grasp fold (11.1%)" MVNYKDLGLVNTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.8%) GO:0030388 (24.8%)" GO:0016020 (0.9%) "GO:0004332 (24.8%) GO:0008270 (24.8%)" "glycolytic process (24.8%) fructose 1,6-bisphosphate metabolic process (24.8%)" membrane (0.9%) "fructose-bisphosphate aldolase activity (24.8%) zinc ion binding (24.8%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" WMTFGQEYLTHLR Pseudomonadati Bacteria Pseudomonadati "1.5.1.7 (54.4%) 1.5.1.43 (31.6%) 1.-.-.- (10.5%)" "saccharopine dehydrogenase (NAD(+), L-lysine-forming) (54.4%) carboxynorspermidine synthase (31.6%) Oxidoreductases (10.5%)" "GO:0004754 (43.1%) GO:0102143 (31%) GO:0016491 (24.1%)" "saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (43.1%) carboxynorspermidine dehydrogenase activity (31%) oxidoreductase activity (24.1%)" "IPR032095 (34.1%) IPR005097 (33%) IPR036291 (32.9%)" "Saccharopine dehydrogenase-like, C-terminal (34.1%) Saccharopine dehydrogenase, NADP binding domain (33%) NAD(P)-binding domain superfamily (32.9%)" TKHAVTEASPMVK Pseudomonadati Bacteria Pseudomonadati "GO:0006412 (24.8%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (24.5%) GO:0005840 (0.8%) GO:1990904 (0.1%)" "GO:0003735 (24.8%) GO:0070181 (24.5%) GO:0019843 (0.3%)" "translation (24.8%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.5%) ribosome (0.8%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.8%) small ribosomal subunit rRNA binding (24.5%) rRNA binding (0.3%)" "IPR014717 (20.1%) IPR035980 (20.1%) IPR000529 (20%)" "Translation elongation factor EF1B/small ribosomal subunit protein bS6 (20.1%) Small ribosomal subunit protein bS6 superfamily (20.1%) Small ribosomal subunit protein bS6 (20%)" RMGHAGAIIAGGK root "6.2.1.5 (75.6%) 6.2.1.4 (24.4%)" "succinate--CoA ligase (ADP-forming) (75.6%) succinate--CoA ligase (GDP-forming) (24.4%)" "GO:0006099 (17.2%) GO:0006606 (0.1%) GO:0006104 (0%)" "GO:0009361 (16.6%) GO:0005739 (8.5%) GO:0045244 (5.9%)" "GO:0004775 (17.2%) GO:0004776 (16.8%) GO:0000166 (16.8%)" "tricarboxylic acid cycle (17.2%) protein import into nucleus (0.1%) succinyl-CoA metabolic process (0%)" "succinate-CoA ligase complex (ADP-forming) (16.6%) mitochondrion (8.5%) succinate-CoA ligase complex (GDP-forming) (5.9%)" "succinate-CoA ligase (ADP-forming) activity (17.2%) succinate-CoA ligase (GDP-forming) activity (16.8%) nucleotide binding (16.8%)" "IPR016102 (14.3%) IPR017440 (14.3%) IPR005811 (14.3%)" "Succinyl-CoA synthetase-like (14.3%) ATP-citrate lyase/succinyl-CoA ligase, active site (14.3%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.3%)" VCMHNVEEDQIFRPAAWNAFGMDKEGADYR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR004216 (11.1%) IPR005763 (11.1%) IPR009015 (11.1%)" "L-fucose/L-arabinose isomerase, C-terminal (11.1%) L-fucose isomerase (11.1%) L-fucose isomerase, N-terminal/central domain superfamily (11.1%)" YGDTPEGMVASCMEFLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.17.7.3 (95.3%) 1.17.7.1 (4.7%)" "(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (95.3%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) (4.7%)" "GO:0016114 (17.6%) GO:0019288 (17.6%)" "GO:0046429 (17.6%) GO:0051539 (17.6%) GO:0005506 (16.7%)" "terpenoid biosynthetic process (17.6%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.6%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.6%) 4 iron, 4 sulfur cluster binding (17.6%) iron ion binding (16.7%)" "IPR004588 (25.6%) IPR011005 (25.6%) IPR017178 (24.4%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25.6%) Dihydropteroate synthase-like superfamily (25.6%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (24.4%)" GKDADIVLLDRDLNVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (34.2%) "GO:0008448 (34.2%) GO:0046872 (31.6%)" N-acetylglucosamine catabolic process (34.2%) "N-acetylglucosamine-6-phosphate deacetylase activity (34.2%) metal ion binding (31.6%)" "IPR006680 (26%) IPR011059 (26%) IPR003764 (24%)" "Amidohydrolase-related (26%) Metal-dependent hydrolase, composite domain superfamily (26%) N-acetylglucosamine-6-phosphate deacetylase (24%)" HMLGSFNHGSMANALPQAIGAALACPDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.2.2 (66.7%) 1.2.5.1 (33.3%)" "Deleted entry (66.7%) pyruvate dehydrogenase (quinone) (33.3%)" GO:0019752 (25%) "GO:0000287 (25%) GO:0030976 (25%) GO:0003824 (21.7%)" carboxylic acid metabolic process (25%) "magnesium ion binding (25%) thiamine pyrophosphate binding (25%) catalytic activity (21.7%)" "IPR000399 (11.1%) IPR011766 (11.1%) IPR012000 (11.1%)" "TPP-binding enzyme, conserved site (11.1%) Thiamine pyrophosphate enzyme, TPP-binding (11.1%) Thiamine pyrophosphate enzyme, central domain (11.1%)" FGKPIYLNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (24.2%) IPR006665 (24.2%) IPR036737 (24.2%)" "Outer membrane protein, bacterial (24.2%) OmpA-like domain (24.2%) OmpA-like domain superfamily (24.2%)" MQDEYNCFFFIADWHSLTTHPHPDNIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (25%) GO:0005829 (25%) "GO:0004830 (25%) GO:0005524 (25%)" tryptophanyl-tRNA aminoacylation (25%) cytosol (25%) "tryptophan-tRNA ligase activity (25%) ATP binding (25%)" "IPR002305 (17.5%) IPR002306 (17.5%) IPR014729 (17.5%)" "Aminoacyl-tRNA synthetase, class Ic (17.5%) Tryptophan-tRNA ligase (17.5%) Rossmann-like alpha/beta/alpha sandwich fold (17.5%)" NCGFVFEGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005506 (50%) GO:0016491 (34.6%) GO:0016692 (11.5%)" "iron ion binding (50%) oxidoreductase activity (34.6%) NADH peroxidase activity (11.5%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" AGATVVNIPDTTGYCLPSEYGAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.3.3.13 (100%) 2-isopropylmalate synthase (100%) GO:0009098 (20.3%) GO:0005737 (19.4%) "GO:0003852 (20.3%) GO:0003985 (19.4%) GO:0030145 (19.4%)" L-leucine biosynthetic process (20.3%) cytoplasm (19.4%) "2-isopropylmalate synthase activity (20.3%) acetyl-CoA C-acetyltransferase activity (19.4%) manganese ion binding (19.4%)" "IPR000891 (12.5%) IPR002034 (12.5%) IPR005671 (12.5%)" "Pyruvate carboxyltransferase (12.5%) Alpha-isopropylmalate/homocitrate synthase, conserved site (12.5%) 2-isopropylmalate synthase, bacterial-type (12.5%)" MDALDIFHPER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) "GO:0048500 (19.1%) GO:0005786 (0.9%)" "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (20%)" SRP-dependent cotranslational protein targeting to membrane (20%) "signal recognition particle (19.1%) signal recognition particle, endoplasmic reticulum targeting (0.9%)" "GTPase activity (20%) GTP binding (20%) 7S RNA binding (20%)" "IPR000897 (11.1%) IPR003593 (11.1%) IPR004125 (11.1%)" "Signal recognition particle, SRP54 subunit, GTPase domain (11.1%) AAA+ ATPase domain (11.1%) Signal recognition particle, SRP54 subunit, M-domain (11.1%)" MEDQGQFECLENELHGLTDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis LLIIAEDVEGEALSTLVVNK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (11.7%) GO:0009408 (11%) GO:0051085 (0%)" "GO:0009986 (10.8%) GO:0042603 (10.8%) GO:0005737 (10.5%)" "GO:0140662 (11.7%) GO:0005524 (11.7%) GO:0016853 (11%)" "protein refolding (11.7%) response to heat (11%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cell surface (10.8%) capsule (10.8%) cytoplasm (10.5%)" "ATP-dependent protein folding chaperone (11.7%) ATP binding (11.7%) isomerase activity (11%)" "IPR001844 (17%) IPR027409 (17%) IPR002423 (16.9%)" "Chaperonin Cpn60/GroEL (17%) GroEL-like apical domain superfamily (17%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%)" LIDIANPTPK root 2.1.1.35 (100%) tRNA (uracil(54)-C(5))-methyltransferase (100%) "GO:0006412 (18.8%) GO:0006396 (1.6%) GO:0032259 (1.6%)" "GO:0005840 (18.8%) GO:1990904 (18.8%)" "GO:0000049 (18.8%) GO:0003735 (18.8%) GO:0003723 (1.6%)" "translation (18.8%) RNA processing (1.6%) methylation (1.6%)" "ribosome (18.8%) ribonucleoprotein complex (18.8%)" "tRNA binding (18.8%) structural constituent of ribosome (18.8%) RNA binding (1.6%)" "IPR001848 (21.4%) IPR018268 (21.4%) IPR027486 (21.4%)" "Small ribosomal subunit protein uS10 (21.4%) Small ribosomal subunit protein uS10, conserved site (21.4%) Small ribosomal subunit protein uS10 domain (21.4%)" AHPHDGAGQGLIKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25.2%) IPR011834 (25.2%) IPR052182 (25.2%)" "Glycosyl transferase, family 35 (25.2%) Alpha-glucan phosphorylase (25.2%) Glycogen_Maltodextrin_Phosphorylase (25.2%)" GKDVLIVEDIIDSGNTLSK root 2.4.2.8 (100%) hypoxanthine phosphoribosyltransferase (100%) "GO:0032264 (10%) GO:0006178 (10%) GO:0032263 (10%)" "GO:0005829 (10%) GO:0005737 (0%) GO:0032991 (0%)" "GO:0004422 (10%) GO:0000287 (10%) GO:0052657 (10%)" "IMP salvage (10%) guanine salvage (10%) GMP salvage (10%)" "cytosol (10%) cytoplasm (0%) protein-containing complex (0%)" "hypoxanthine phosphoribosyltransferase activity (10%) magnesium ion binding (10%) guanine phosphoribosyltransferase activity (10%)" "IPR000836 (25.1%) IPR029057 (25.1%) IPR050408 (25.1%)" "Phosphoribosyltransferase domain (25.1%) Phosphoribosyltransferase-like (25.1%) Hypoxanthine-guanine phosphoribosyltransferase (25.1%)" EHEDTLAGIEATGVTQR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota GO:0005829 (100%) cytosol (100%) "IPR019633 (50%) IPR038191 (50%)" "Protein of unknown function DUF2498 (50%) YciN superfamily (50%)" SYADCYVNDAFGTAHR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" VWANPEHANK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR005886 (33.3%) IPR036291 (33.3%) IPR001509 (21.2%)" "UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD-dependent epimerase/dehydratase (21.2%)" SFDSIDNAPEEKER Pseudomonadati Bacteria Pseudomonadati 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0006414 (0%) "GO:0005829 (16.4%) GO:0032045 (9.5%) GO:0005737 (0%)" "GO:0003746 (16.5%) GO:0003924 (16.5%) GO:0005525 (16.5%)" translational elongation (0%) "cytosol (16.4%) guanyl-nucleotide exchange factor complex (9.5%) cytoplasm (0%)" "translation elongation factor activity (16.5%) GTPase activity (16.5%) GTP binding (16.5%)" "IPR000795 (8.4%) IPR027417 (8.4%) IPR031157 (8.4%)" "Translational (tr)-type GTP-binding domain (8.4%) P-loop containing nucleoside triphosphate hydrolase (8.4%) Tr-type G domain, conserved site (8.4%)" LKEELFDQVDIDPANIYCPDGSMPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.3%) GO:0006044 (32.3%)" "GO:0004342 (32.3%) GO:0016853 (3.2%)" "carbohydrate metabolic process (32.3%) N-acetylglucosamine metabolic process (32.3%)" "glucosamine-6-phosphate deaminase activity (32.3%) isomerase activity (3.2%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" YAGTELEVEGTKYLIMR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0051085 (1%) GO:0005737 (15.7%) "GO:0005524 (16.7%) GO:0044183 (16.7%) GO:0046872 (16.7%)" obsolete chaperone cofactor-dependent protein refolding (1%) cytoplasm (15.7%) "ATP binding (16.7%) protein folding chaperone (16.7%) metal ion binding (16.7%)" "IPR011032 (33.3%) IPR020818 (33.3%) IPR037124 (33.3%)" "GroES-like superfamily (33.3%) GroES chaperonin family (33.3%) GroES chaperonin superfamily (33.3%)" ALKGTGIPLIADGGLR Pseudomonadati Bacteria Pseudomonadati 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20.2%) GO:0006183 (20.2%)" "GO:0003938 (20.2%) GO:0046872 (20.2%) GO:0000166 (18.9%)" "GMP biosynthetic process (20.2%) GTP biosynthetic process (20.2%)" "IMP dehydrogenase activity (20.2%) metal ion binding (20.2%) nucleotide binding (18.9%)" "IPR001093 (16.8%) IPR005990 (16.8%) IPR015875 (16.8%)" "IMP dehydrogenase/GMP reductase (16.8%) Inosine-5'-monophosphate dehydrogenase (16.8%) IMP dehydrogenase / GMP reductase, conserved site (16.8%)" AHIEKQAGELQEK root "GO:0006412 (16.8%) GO:0042254 (15.9%) GO:0000028 (0%)" "GO:0015935 (16.5%) GO:0005737 (15.9%) GO:0005840 (0.7%)" "GO:0003735 (16.9%) GO:0019843 (16.8%) GO:0003723 (0.1%)" "translation (16.8%) ribosome biogenesis (15.9%) ribosomal small subunit assembly (0%)" "small ribosomal subunit (16.5%) cytoplasm (15.9%) ribosome (0.7%)" "structural constituent of ribosome (16.9%) rRNA binding (16.8%) RNA binding (0.1%)" "IPR013810 (14.4%) IPR018192 (14.3%) IPR000851 (14.3%)" "Small ribosomal subunit protein uS5, N-terminal (14.4%) Small ribosomal subunit protein uS5, N-terminal, conserved site (14.3%) Small ribosomal subunit protein uS5 (14.3%)" LGLLRPITLWPFPTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.7 (54.5%) 1.2.7.1 (27.3%) 1.2.7.11 (9.1%)" "3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) (54.5%) pyruvate synthase (27.3%) 2-oxoacid oxidoreductase (ferredoxin) (9.1%)" "GO:0016491 (59.1%) GO:0043807 (27.3%) GO:0019164 (13.6%)" "oxidoreductase activity (59.1%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity (27.3%) pyruvate synthase activity (13.6%)" "IPR009014 (20.4%) IPR033412 (20.4%) IPR052368 (20.4%)" "Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20.4%) Pyruvate:ferredoxin oxidoreductase, core domain II (20.4%) 2-oxoacid oxidoreductase subunit (20.4%)" DLSELSTYSFVDNVAFR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.7.7.87 (66.7%) 3.1.3.97 (33.3%)" "L-threonylcarbamoyladenylate synthase (66.7%) 3',5'-nucleoside bisphosphate phosphatase (33.3%)" GO:0006364 (0.4%) GO:0005829 (0.4%) "GO:0003725 (93.5%) GO:0016779 (3%) GO:0061710 (0.9%)" rRNA processing (0.4%) cytosol (0.4%) "double-stranded RNA binding (93.5%) nucleotidyltransferase activity (3%) L-threonylcarbamoyladenylate synthase (0.9%)" "IPR006070 (33.2%) IPR017945 (33.2%) IPR052532 (33.2%)" "Threonylcarbamoyl-AMP synthase-like domain (33.2%) DHBP synthase RibB-like alpha/beta domain superfamily (33.2%) SUA5 domain-containing protein (33.2%)" FIYGTGMMLPAFEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0042026 (33.3%) GO:0005737 (33.3%) GO:0003755 (33.3%) protein refolding (33.3%) cytoplasm (33.3%) peptidyl-prolyl cis-trans isomerase activity (33.3%) "IPR001179 (46.2%) IPR046357 (46.2%) IPR048261 (7.7%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (46.2%) Peptidyl-prolyl cis-trans isomerase domain superfamily (46.2%) PPIase chaperone SlpA/SlyD-like, insertion domain superfamily (7.7%)" DGYADGWAQAGTAR root "GO:0002181 (24.6%) GO:0006412 (0.1%) GO:0000027 (0.1%)" "GO:0022625 (24.6%) GO:0005840 (0.7%) GO:1990904 (0.1%)" "GO:0003735 (24.7%) GO:0019843 (24.7%) GO:0070180 (0.1%)" "cytoplasmic translation (24.6%) translation (0.1%) ribosomal large subunit assembly (0.1%)" "cytosolic large ribosomal subunit (24.6%) ribosome (0.7%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.7%) rRNA binding (24.7%) large ribosomal subunit rRNA binding (0.1%)" "IPR020040 (20%) IPR036789 (20%) IPR000702 (19.9%)" "Large ribosomal subunit protein uL6, alpha-beta domain (20%) Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily (20%) Large ribosomal subunit protein uL6-like (19.9%)" NRGVVMNPVDHPMGGGEGR Pseudomonadati Bacteria Pseudomonadati GO:0002181 (19.9%) "GO:0015934 (19.9%) GO:0005840 (0.1%) GO:1990904 (0.1%)" "GO:0003735 (20%) GO:0016740 (19.9%) GO:0019843 (18.7%)" cytoplasmic translation (19.9%) "large ribosomal subunit (19.9%) ribosome (0.1%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (20%) transferase activity (19.9%) rRNA binding (18.7%)" "IPR002171 (11.1%) IPR008991 (11.1%) IPR014726 (11.1%)" "Large ribosomal subunit protein uL2 (11.1%) Translation protein SH3-like domain superfamily (11.1%) Large ribosomal subunit protein uL2, domain 3 (11.1%)" GITYTNFGPGR Bacteria Bacteria 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25.3%) GO:0019877 (24.7%)" "GO:0047850 (25.3%) GO:0000166 (24.7%)" "lysine biosynthetic process via diaminopimelate (25.3%) diaminopimelate biosynthetic process (24.7%)" "diaminopimelate dehydrogenase activity (25.3%) nucleotide binding (24.7%)" "IPR010190 (25.3%) IPR036291 (25.3%) IPR000683 (24.7%)" "Diaminopimelate dehydrogenase, Ddh (25.3%) NAD(P)-binding domain superfamily (25.3%) Gfo/Idh/MocA-like oxidoreductase, N-terminal (24.7%)" LTDINLADIPYYTFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (17.3%) GO:0032259 (6.1%)" "GO:0005829 (17.3%) GO:0005960 (17.3%)" "GO:0004047 (17.3%) GO:0008483 (17.3%) GO:0008168 (6.1%)" "glycine decarboxylation via glycine cleavage system (17.3%) methylation (6.1%)" "cytosol (17.3%) glycine cleavage complex (17.3%)" "aminomethyltransferase activity (17.3%) transaminase activity (17.3%) methyltransferase activity (6.1%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" DKNVEEISAMVGFANR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006355 (0.8%) "GO:0003700 (49.6%) GO:0043565 (48.8%) GO:0000976 (0.8%)" regulation of DNA-templated transcription (0.8%) "DNA-binding transcription factor activity (49.6%) sequence-specific DNA binding (48.8%) transcription cis-regulatory region binding (0.8%)" "IPR018060 (50.4%) IPR009057 (49.6%)" "AraC-like, DNA binding HTH domain (50.4%) Homedomain-like superfamily (49.6%)" EVLKNETIAVIGYGVQGPGQSLNLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.86 (89.4%) 1.1.1.- (10.6%)" "ketol-acid reductoisomerase (NADP(+)) (89.4%) With NAD(+) or NADP(+) as acceptor (10.6%)" "GO:0009097 (20.9%) GO:0009099 (20.9%)" GO:0070013 (0.8%) "GO:0004455 (20.9%) GO:0046872 (19.7%) GO:0016853 (16.7%)" "isoleucine biosynthetic process (20.9%) L-valine biosynthetic process (20.9%)" intracellular organelle lumen (0.8%) "ketol-acid reductoisomerase activity (20.9%) metal ion binding (19.7%) isomerase activity (16.7%)" "IPR013023 (16.8%) IPR013116 (16.8%) IPR036291 (16.8%)" "Ketol-acid reductoisomerase (16.8%) Ketol-acid reductoisomerase, N-terminal (16.8%) NAD(P)-binding domain superfamily (16.8%)" QYANATLLR root "4.1.2.13 (98.6%) 4.1.2.- (1.4%)" "fructose-bisphosphate aldolase (98.6%) Aldehyde-lyases (1.4%)" "GO:0006096 (25.3%) GO:0030388 (22.2%) GO:0005975 (0.5%)" GO:0016020 (0.2%) "GO:0008270 (25.8%) GO:0004332 (22.6%) GO:0016832 (3.2%)" "glycolytic process (25.3%) fructose 1,6-bisphosphate metabolic process (22.2%) carbohydrate metabolic process (0.5%)" membrane (0.2%) "zinc ion binding (25.8%) fructose-bisphosphate aldolase activity (22.6%) aldehyde-lyase activity (3.2%)" "IPR000771 (25.9%) IPR013785 (25.9%) IPR050246 (25.9%)" "Fructose-bisphosphate aldolase, class-II (25.9%) Aldolase-type TIM barrel (25.9%) Class II Fructose-bisphosphate Aldolase (25.9%)" AVAPLVPAADALVLDSTTLSIEQVIEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.7.4.25 (100%) (d)CMP kinase (100%) "GO:0015949 (17.7%) GO:0006220 (17.4%) GO:0006139 (0.2%)" GO:0005829 (17.7%) "GO:0005524 (18.1%) GO:0036431 (18.1%) GO:0036430 (9.8%)" "nucleobase-containing small molecule interconversion (17.7%) pyrimidine nucleotide metabolic process (17.4%) nucleobase-containing compound metabolic process (0.2%)" cytosol (17.7%) "ATP binding (18.1%) dCMP kinase activity (18.1%) CMP kinase activity (9.8%)" "IPR011994 (33.4%) IPR027417 (33.4%) IPR003136 (33.1%)" "Cytidylate kinase domain (33.4%) P-loop containing nucleoside triphosphate hydrolase (33.4%) Cytidylate kinase (33.1%)" YTMIVDNMNSSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006508 (33.3%) GO:0005829 (33.3%) GO:0008237 (33.3%) proteolysis (33.3%) cytosol (33.3%) metallopeptidase activity (33.3%) "IPR002510 (16.7%) IPR035068 (16.7%) IPR036059 (16.7%)" "Metalloprotease TldD/E, N-terminal domain (16.7%) Metalloprotease TldD/PmbA, N-terminal (16.7%) Metalloprotease TldD/PmbA superfamily (16.7%)" MAQLAIQGPK Bacteria Bacteria 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (14.5%) GO:0032259 (11%) GO:0006546 (1.1%)" "GO:0005829 (15.6%) GO:0005960 (15.6%)" "GO:0004047 (15.6%) GO:0008483 (15.2%) GO:0008168 (11%)" "glycine decarboxylation via glycine cleavage system (14.5%) methylation (11%) glycine catabolic process (1.1%)" "cytosol (15.6%) glycine cleavage complex (15.6%)" "aminomethyltransferase activity (15.6%) transaminase activity (15.2%) methyltransferase activity (11%)" "IPR006222 (14.4%) IPR006223 (14.4%) IPR027266 (14.4%)" "GCVT, N-terminal domain (14.4%) Glycine cleavage system T protein (14.4%) Aminomethyltransferase superfamily (14.4%)" LVMRPSEISNNPEIIRR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.8.3.- (80%) 3.1.2.1 (20%)" "CoA-transferases (80%) acetyl-CoA hydrolase (20%)" "GO:0006083 (25.5%) GO:0006084 (23.5%)" "GO:0003986 (25.5%) GO:0008775 (25.5%)" "acetate metabolic process (25.5%) acetyl-CoA metabolic process (23.5%)" "acetyl-CoA hydrolase activity (25.5%) acetate CoA-transferase activity (25.5%)" "IPR026888 (17.1%) IPR037171 (17.1%) IPR038460 (17.1%)" "Acetyl-CoA hydrolase/transferase, C-terminal domain (17.1%) NagB/RpiA transferase-like (17.1%) Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily (17.1%)" GEWNVYDIIYTAPTFK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0016787 (92.9%) GO:0046872 (7.1%)" "hydrolase activity (92.9%) metal ion binding (7.1%)" IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) FTGIDSSSQPSMDEMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.3.7 (100%) 3'(2'),5'-bisphosphate nucleotidase (100%) "GO:0000103 (20%) GO:0050427 (20%)" GO:0005886 (20%) "GO:0000287 (20%) GO:0008441 (20%)" "sulfate assimilation (20%) 3'-phosphoadenosine 5'-phosphosulfate metabolic process (20%)" plasma membrane (20%) "magnesium ion binding (20%) 3'(2'),5'-bisphosphate nucleotidase activity (20%)" "IPR000760 (25%) IPR006240 (25%) IPR020583 (25%)" "Inositol monophosphatase-like (25%) 3'(2'),5'-bisphosphate nucleotidase CysQ (25%) Inositol monophosphatase, metal-binding site (25%)" TKGVTAVIENTAGQGSNLGNEFWQLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.1.21.2 (100%) deoxyribonuclease IV (100%) GO:0006284 (16.7%) "GO:0003677 (16.7%) GO:0003906 (16.7%) GO:0008081 (16.7%)" base-excision repair (16.7%) "DNA binding (16.7%) DNA-(apurinic or apyrimidinic site) endonuclease activity (16.7%) phosphoric diester hydrolase activity (16.7%)" "IPR001719 (25%) IPR013022 (25%) IPR018246 (25%)" "AP endonuclease 2 (25%) Xylose isomerase-like, TIM barrel domain (25%) AP endonuclease 2, zinc binding site (25%)" VLNGLGIAVLSTSK Bacteria Bacteria GO:0006412 (16.7%) "GO:0005840 (16.7%) GO:1990904 (16.7%) GO:0005737 (16.5%)" "GO:0003735 (16.7%) GO:0019843 (16.5%)" translation (16.7%) "ribosome (16.7%) ribonucleoprotein complex (16.7%) cytoplasm (16.5%)" "structural constituent of ribosome (16.7%) rRNA binding (16.5%)" "IPR000630 (34%) IPR035987 (34%) IPR047863 (32.1%)" "Small ribosomal subunit protein uS8 (34%) Small ribosomal subunit protein uS8 superfamily (34%) Small ribosomal subunit protein uS8, conserved site (32.1%)" SIGRFHLDGIPAAQR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005737 (23.5%) GO:0070013 (3.4%)" "GO:0005524 (24.4%) GO:0051082 (24.4%) GO:0140662 (24.4%)" "cytoplasm (23.5%) intracellular organelle lumen (3.4%)" "ATP binding (24.4%) unfolded protein binding (24.4%) ATP-dependent protein folding chaperone (24.4%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" GILQAEGAEIINEENWGLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" IIVCEYCGR Bacteroidota Bacteria Pseudomonadati Bacteroidota "IPR003743 (49.8%) IPR052376 (49.7%) IPR056003 (0.5%)" "C4-type zinc ribbon domain (49.8%) Oxidative Scavengers and Glycosyltransferases (49.7%) CT398-like coiled coil hairpin domain (0.5%)" LYDPTAGEILFDGK Bacillota Bacteria Bacillati Bacillota 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0015833 (16.7%) GO:0055085 (16.7%) GO:0015031 (14.3%)" GO:0005886 (14.3%) "GO:0005524 (21.4%) GO:0016887 (16.7%)" "peptide transport (16.7%) transmembrane transport (16.7%) protein transport (14.3%)" plasma membrane (14.3%) "ATP binding (21.4%) ATP hydrolysis activity (16.7%)" "IPR003439 (19.6%) IPR003593 (19.6%) IPR017871 (19.6%)" "ABC transporter-like, ATP-binding domain (19.6%) AAA+ ATPase domain (19.6%) ABC transporter-like, conserved site (19.6%)" VGELSYEGLELLNAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" MMSQLLNSAVFPGIQGGPLEHVIAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (16%) GO:0035999 (15.4%) GO:0032259 (9.6%)" "GO:0005829 (16%) GO:0016020 (0.5%)" "GO:0004372 (16%) GO:0030170 (16%) GO:0008168 (9.6%)" "glycine biosynthetic process from serine (16%) tetrahydrofolate interconversion (15.4%) methylation (9.6%)" "cytosol (16%) membrane (0.5%)" "glycine hydroxymethyltransferase activity (16%) pyridoxal phosphate binding (16%) methyltransferase activity (9.6%)" "IPR015421 (14.4%) IPR015422 (14.4%) IPR015424 (14.4%)" "Pyridoxal phosphate-dependent transferase, major domain (14.4%) Pyridoxal phosphate-dependent transferase, small domain (14.4%) Pyridoxal phosphate-dependent transferase (14.4%)" RSYGNDNSYGGNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" LVVYHSQTAPLIDWYK Bacteria Bacteria 2.7.4.3 (100%) adenylate kinase (100%) GO:0044209 (24.8%) GO:0005737 (24.8%) "GO:0004017 (24.8%) GO:0005524 (24.8%) GO:0016301 (0.7%)" AMP salvage (24.8%) cytoplasm (24.8%) "AMP kinase activity (24.8%) ATP binding (24.8%) kinase activity (0.7%)" "IPR000850 (29.8%) IPR027417 (29.8%) IPR033690 (29.8%)" "Adenylate kinase/UMP-CMP kinase (29.8%) P-loop containing nucleoside triphosphate hydrolase (29.8%) Adenylate kinase, conserved site (29.8%)" GTTLGADNGLGVAAIMAVLEDQNLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25.6%) IPR002933 (25.6%) IPR011650 (25.6%)" "Peptidase M20C, Xaa-His dipeptidase (25.6%) Peptidase M20 (25.6%) Peptidase M20, dimerisation domain (25.6%)" GGIIQQLKDDDGLQAALK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.21.- (80%) 3.4.21.102 (20%)" "Serine endopeptidases (80%) C-terminal processing peptidase (20%)" "GO:0006508 (20.5%) GO:0007165 (20.5%)" GO:0030288 (20.5%) "GO:0004175 (18.1%) GO:0008236 (18.1%) GO:0004252 (2.4%)" "proteolysis (20.5%) signal transduction (20.5%)" outer membrane-bounded periplasmic space (20.5%) "endopeptidase activity (18.1%) serine-type peptidase activity (18.1%) serine-type endopeptidase activity (2.4%)" "IPR001478 (16.7%) IPR004447 (16.7%) IPR005151 (16.7%)" "PDZ domain (16.7%) C-terminal-processing peptidase S41A (16.7%) Tail specific protease (16.7%)" KLNSAVFPGGQGGPLMHVIAGK root "2.1.2.1 (99.8%) 4.1.2.- (0.2%)" "glycine hydroxymethyltransferase (99.8%) Aldehyde-lyases (0.2%)" "GO:0019264 (16%) GO:0035999 (15.7%) GO:0032259 (9.4%)" "GO:0005829 (16%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0004372 (16%) GO:0030170 (16%) GO:0008168 (9.4%)" "glycine biosynthetic process from serine (16%) tetrahydrofolate interconversion (15.7%) methylation (9.4%)" "cytosol (16%) cytoplasm (0.1%) membrane (0%)" "glycine hydroxymethyltransferase activity (16%) pyridoxal phosphate binding (16%) methyltransferase activity (9.4%)" "IPR015421 (14.3%) IPR015424 (14.3%) IPR039429 (14.3%)" "Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase (14.3%) Serine hydroxymethyltransferase-like domain (14.3%)" LGDNAEMCFIELVDYNENMAKEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (33.2%) "GO:0022625 (33.2%) GO:0005840 (0.4%)" GO:0003735 (33.2%) translation (33.2%) "cytosolic large ribosomal subunit (33.2%) ribosome (0.4%)" structural constituent of ribosome (33.2%) "IPR000456 (33.7%) IPR036373 (33.7%) IPR047859 (32.5%)" "Large ribosomal subunit protein bL17 (33.7%) Large ribosomal subunit protein bL17 superfamily (33.7%) Large ribosomal subunit protein bL17, conserved site (32.5%)" MNKAELIEALADK Bacteria Bacteria GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (34.1%) IPR010992 (34.1%) IPR020816 (31.8%)" "Histone-like DNA-binding protein (34.1%) Integration host factor (IHF)-like DNA-binding domain superfamily (34.1%) Histone-like DNA-binding protein, conserved site (31.8%)" DGKYVLAGEGNK root "4.2.1.11 (99.8%) 6.3.4.2 (0.2%)" "phosphopyruvate hydratase (99.8%) CTP synthase (glutamine hydrolyzing) (0.2%)" "GO:0006096 (16.7%) GO:0019856 (0%) GO:0044210 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (15.8%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" "glycolytic process (16.7%) pyrimidine nucleobase biosynthetic process (0%) 'de novo' CTP biosynthetic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (15.8%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020810 (16.8%) IPR036849 (16.8%)" "Enolase (16.8%) Enolase, C-terminal TIM barrel domain (16.8%) Enolase-like, C-terminal domain superfamily (16.8%)" VLAICSYGNDKADALAQCYK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0006189 (20%) GO:0009113 (20%)" "GO:0004637 (20%) GO:0005524 (20%) GO:0046872 (20%)" "'de novo' IMP biosynthetic process (20%) purine nucleobase biosynthetic process (20%)" "phosphoribosylamine-glycine ligase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000115 (11.1%) IPR011054 (11.1%) IPR011761 (11.1%)" "Phosphoribosylglycinamide synthetase (11.1%) Rudiment single hybrid motif (11.1%) ATP-grasp fold (11.1%)" MKTNLSSQITLNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.4%) GO:0006044 (32%)" "GO:0004342 (32.4%) GO:0016853 (3.2%)" "carbohydrate metabolic process (32.4%) N-acetylglucosamine metabolic process (32%)" "glucosamine-6-phosphate deaminase activity (32.4%) isomerase activity (3.2%)" "IPR006148 (15%) IPR037171 (15%) IPR052960 (15%)" "Glucosamine/galactosamine-6-phosphate isomerase (15%) NagB/RpiA transferase-like (15%) Glucosamine-6-phosphate deaminase-like (15%)" NDNPQAASRPWDKER root "2.3.1.179 (99.6%) 2.3.1.41 (0.4%)" "beta-ketoacyl-[acyl-carrier-protein] synthase II (99.6%) beta-ketoacyl-[acyl-carrier-protein] synthase I (0.4%)" "GO:0006633 (32.8%) GO:0006233 (0.1%) GO:0006260 (0.1%)" "GO:0005829 (32.7%) GO:0005886 (0.1%) GO:0009360 (0.1%)" "GO:0004315 (32.8%) GO:0003677 (0.1%) GO:0003887 (0.1%)" "fatty acid biosynthetic process (32.8%) dTDP biosynthetic process (0.1%) DNA replication (0.1%)" "cytosol (32.7%) plasma membrane (0.1%) DNA polymerase III complex (0.1%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (32.8%) DNA binding (0.1%) DNA-directed DNA polymerase activity (0.1%)" "IPR000794 (14.4%) IPR014030 (14.4%) IPR016039 (14.3%)" "Beta-ketoacyl synthase (14.4%) Beta-ketoacyl synthase-like, N-terminal (14.4%) Thiolase-like (14.3%)" GTAMNPVDHPHGGGEGR root 2.-.-.- (100%) Transferases (100%) "GO:0002181 (17.1%) GO:0006412 (0.2%) GO:0032543 (0.1%)" "GO:0015934 (17.2%) GO:0005829 (12.4%) GO:0005840 (0.3%)" "GO:0003735 (17.4%) GO:0016740 (17.4%) GO:0019843 (16.9%)" "cytoplasmic translation (17.1%) translation (0.2%) mitochondrial translation (0.1%)" "large ribosomal subunit (17.2%) cytosol (12.4%) ribosome (0.3%)" "structural constituent of ribosome (17.4%) transferase activity (17.4%) rRNA binding (16.9%)" "IPR002171 (11.1%) IPR022669 (11.1%) IPR008991 (11.1%)" "Large ribosomal subunit protein uL2 (11.1%) Large ribosomal subunit protein uL2, C-terminal (11.1%) Translation protein SH3-like domain superfamily (11.1%)" MNELMALHTGQSLEQIER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.4.21.92 (100%) endopeptidase Clp (100%) "GO:0006515 (16%) GO:0006508 (0.9%) GO:0009266 (0.2%)" "GO:0009368 (16%) GO:0005737 (15.6%) GO:0005829 (0.2%)" "GO:0004252 (16.4%) GO:0004176 (16%) GO:0051117 (16%)" "protein quality control for misfolded or incompletely synthesized proteins (16%) proteolysis (0.9%) response to temperature stimulus (0.2%)" "endopeptidase Clp complex (16%) cytoplasm (15.6%) cytosol (0.2%)" "serine-type endopeptidase activity (16.4%) ATP-dependent peptidase activity (16%) ATPase binding (16%)" "IPR023562 (20.7%) IPR029045 (20.3%) IPR001907 (20%)" "Clp protease proteolytic subunit /Translocation-enhancing protein TepA (20.7%) ClpP/crotonase-like domain superfamily (20.3%) ATP-dependent Clp protease proteolytic subunit (20%)" TLGGEAYALTCPLITK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.9%) GO:0005829 (16.9%) "GO:0003723 (16.9%) GO:0004831 (16.9%) GO:0005524 (16.9%)" tyrosyl-tRNA aminoacylation (16.9%) cytosol (16.9%) "RNA binding (16.9%) tyrosine-tRNA ligase activity (16.9%) ATP binding (16.9%)" "IPR001412 (12.5%) IPR002305 (12.5%) IPR002307 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Aminoacyl-tRNA synthetase, class Ic (12.5%) Tyrosine-tRNA ligase (12.5%)" LGGDDFDQVLIDYLAEEFKK Peptostreptococcales Bacteria Bacillati Bacillota Clostridia Peptostreptococcales GO:0005737 (2.7%) "GO:0005524 (32.4%) GO:0051082 (32.4%) GO:0140662 (32.4%)" cytoplasm (2.7%) "ATP binding (32.4%) unfolded protein binding (32.4%) ATP-dependent protein folding chaperone (32.4%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" GMIAQLSQQIPADKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.1.1.- (50%) 1.1.1.1 (50%)" "With NAD(+) or NADP(+) as acceptor (50%) alcohol dehydrogenase (50%)" GO:0005829 (20.3%) "GO:0008106 (20.3%) GO:1990002 (20.3%) GO:1990362 (20.3%)" cytosol (20.3%) "alcohol dehydrogenase (NADP+) activity (20.3%) methylglyoxal reductase (NADPH) (acetol producing) activity (20.3%) butanol dehydrogenase (NAD+) activity (20.3%)" "IPR044731 (17.6%) IPR001670 (16.5%) IPR011322 (16.5%)" "Butanol dehydrogenase-like (17.6%) Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (16.5%) Nitrogen regulatory PII-like, alpha/beta (16.5%)" AVDGEYTQSVADQEEIKKLFPNTYGMPIVTFEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" TLLGADDKAGIAEIVSAVVYLQEHPEIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.11.4 (95.8%) 3.4.11.- (4.2%)" "tripeptide aminopeptidase (95.8%) Aminopeptidases (4.2%)" "GO:0006508 (16.7%) GO:0043171 (15.9%) GO:0006518 (0.8%)" GO:0005829 (16.7%) "GO:0008237 (16.7%) GO:0008270 (16.7%) GO:0045148 (16.7%)" "proteolysis (16.7%) peptide catabolic process (15.9%) peptide metabolic process (0.8%)" cytosol (16.7%) "metallopeptidase activity (16.7%) zinc ion binding (16.7%) tripeptide aminopeptidase activity (16.7%)" "IPR001261 (20%) IPR002933 (20%) IPR010161 (20%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%) Peptidase M20 (20%) Peptidase M20B, tripeptide aminopeptidase (20%)" EIMEAEDQNAMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0015977 (23.3%) GO:0009317 (23.3%) "GO:0003989 (23.3%) GO:0004658 (23.3%) GO:0016740 (5.8%)" carbon fixation (23.3%) acetyl-CoA carboxylase complex (23.3%) "acetyl-CoA carboxylase activity (23.3%) propionyl-CoA carboxylase activity (23.3%) transferase activity (5.8%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" GSPIQPTLDSLKGK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (47.1%) GO:0006995 (0.3%) GO:0009267 (0.3%)" "GO:0030288 (49.1%) GO:0030313 (0.9%) GO:0016020 (0.3%)" "GO:0016597 (0.3%) GO:0016787 (0.3%)" "amino acid transport (47.1%) cellular response to nitrogen starvation (0.3%) cellular response to starvation (0.3%)" "outer membrane-bounded periplasmic space (49.1%) cell envelope (0.9%) membrane (0.3%)" "amino acid binding (0.3%) hydrolase activity (0.3%)" "IPR001638 (34.2%) IPR018313 (33.1%) IPR005768 (32.7%)" "Solute-binding protein family 3/N-terminal domain of MltF (34.2%) Solute-binding protein family 3, conserved site (33.1%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (32.7%)" VADCTSNELFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR011542 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufD (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" VGSGPFPTELFDETGDKICTLGHEFGSVTGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0004019 (16.7%) GO:0005525 (16.7%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) adenylosuccinate synthase activity (16.7%) GTP binding (16.7%)" "IPR001114 (14.3%) IPR018220 (14.3%) IPR027417 (14.3%)" "Adenylosuccinate synthetase (14.3%) Adenylosuccinate synthase, GTP-binding site (14.3%) P-loop containing nucleoside triphosphate hydrolase (14.3%)" VANDLKQFGTVQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.4.21.107 (66.7%) 3.4.21.- (33.3%)" "peptidase Do (66.7%) Serine endopeptidases (33.3%)" GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001478 (17%) IPR001940 (17%) IPR009003 (17%)" "PDZ domain (17%) Peptidase S1C (17%) Peptidase S1, PA clan (17%)" TISGSDREVEELIVELLENHTIG Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009055 (100%) electron transfer activity (100%) "IPR000049 (20%) IPR012255 (20%) IPR014729 (20%)" "Electron transfer flavoprotein, beta-subunit, conserved site (20%) Electron transfer flavoprotein, beta subunit (20%) Rossmann-like alpha/beta/alpha sandwich fold (20%)" MVDTTDEWIMTR Pseudomonadati Bacteria Pseudomonadati 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) "GO:0006633 (20%) GO:0044550 (20%)" "GO:0005737 (19.6%) GO:0016020 (0.8%)" "GO:0004315 (20%) GO:0033818 (19.6%)" "fatty acid biosynthetic process (20%) secondary metabolite biosynthetic process (20%)" "cytoplasm (19.6%) membrane (0.8%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (20%) beta-ketoacyl-acyl-carrier-protein synthase III activity (19.6%)" "IPR013751 (25.2%) IPR016039 (25.2%) IPR004655 (24.8%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (25.2%) Thiolase-like (25.2%) Beta-ketoacyl-[acyl-carrier-protein] synthase III (24.8%)" MSVHDQEMMIGR Bacteria Bacteria "1.11.1.- (84.4%) 4.99.1.1 (8.9%) 4.98.1.1 (6.7%)" "Peroxidases (84.4%) Transferred entry: 4.98.1.1 (8.9%) protoporphyrin ferrochelatase (6.7%)" GO:0005829 (32.6%) "GO:0004601 (33.5%) GO:0020037 (32.6%) GO:0016829 (0.9%)" cytosol (32.6%) "peroxidase activity (33.5%) heme binding (32.6%) lyase activity (0.9%)" "IPR006314 (25.3%) IPR048328 (25.3%) IPR011008 (25.2%)" "Dyp-type peroxidase (25.3%) Dyp-type peroxidase, C-terminal domain (25.3%) Dimeric alpha-beta barrel (25.2%)" GEHMDFIPGSYAQIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (16.7%) "GO:0005886 (16.6%) GO:0016020 (0.1%)" "GO:0016655 (16.7%) GO:0051537 (16.7%) GO:0046872 (16.6%)" sodium ion transport (16.7%) "plasma membrane (16.6%) membrane (0.1%)" "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (16.7%) 2 iron, 2 sulfur cluster binding (16.7%) metal ion binding (16.6%)" "IPR001433 (10.2%) IPR008333 (10.2%) IPR010205 (10.2%)" "Oxidoreductase FAD/NAD(P)-binding (10.2%) Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain (10.2%) Na(+)-translocating NADH-quinone reductase subunit F (10.2%)" VMGQALPELVDQVVEVVQR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria GO:0034605 (0.2%) GO:0005829 (99.8%) cellular response to heat (0.2%) cytosol (99.8%) "IPR007454 (50%) IPR027471 (50%)" "Uncharacterised protein family UPF0250, YbeD-like (50%) YbeD-like domain superfamily (50%)" SRVPAELEKLSELAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" AKFEQLADGLIQACIEPCR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005737 (21.4%) GO:0070013 (7.1%)" "GO:0005524 (23.8%) GO:0051082 (23.8%) GO:0140662 (23.8%)" "cytoplasm (21.4%) intracellular organelle lumen (7.1%)" "ATP binding (23.8%) unfolded protein binding (23.8%) ATP-dependent protein folding chaperone (23.8%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" VVSLLKEEVEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" SENIKPSEVSEVLLQQLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0045259 (19.4%) GO:0005886 (18.3%)" "GO:0005524 (19.4%) GO:0043531 (19.4%) GO:0046933 (19.4%)" "proton-transporting ATP synthase complex (19.4%) plasma membrane (18.3%)" "ATP binding (19.4%) ADP binding (19.4%) proton-transporting ATP synthase activity, rotational mechanism (19.4%)" "IPR000194 (10%) IPR000793 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) ATP synthase, alpha subunit, C-terminal (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" LYPEALADVNTIDLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.1.1.133 (78.9%) 2.1.1.- (15.8%) 2.1.1.271 (5.3%)" "precorrin-4 C(11)-methyltransferase (78.9%) Methyltransferases (15.8%) cobalt-precorrin-4 methyltransferase (5.3%)" "GO:0009236 (33.3%) GO:0032259 (33.3%)" GO:0046026 (33.3%) "cobalamin biosynthetic process (33.3%) methylation (33.3%)" precorrin-4 C11-methyltransferase activity (33.3%) "IPR000878 (8.3%) IPR002750 (8.3%) IPR003043 (8.3%)" "Tetrapyrrole methylase (8.3%) CobE/GbiG C-terminal domain (8.3%) Uroporphiryn-III C-methyltransferase, conserved site (8.3%)" TLNLIKNDPWLEPYKDAIVGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) GO:0005737 (20%) "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (20%)" glycogen biosynthetic process (20%) cytoplasm (20%) "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (20%)" "IPR004193 (12.5%) IPR006047 (12.5%) IPR006048 (12.5%)" "Glycoside hydrolase, family 13, N-terminal (12.5%) Glycosyl hydrolase family 13, catalytic domain (12.5%) Alpha-amylase/branching enzyme, C-terminal all beta (12.5%)" EAFGAKPGDLILILSGDDAMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.12 (100%) aspartate--tRNA ligase (100%) GO:0006422 (19.9%) GO:0005737 (19.9%) "GO:0003676 (19.9%) GO:0004815 (19.9%) GO:0005524 (19.9%)" aspartyl-tRNA aminoacylation (19.9%) cytoplasm (19.9%) "nucleic acid binding (19.9%) aspartate-tRNA ligase activity (19.9%) ATP binding (19.9%)" "IPR002312 (9.1%) IPR004115 (9.1%) IPR004364 (9.1%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.1%) GAD-like domain superfamily (9.1%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.1%)" NALTEANGDIDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (48.6%) GO:0003746 (51.4%) cytoplasm (48.6%) translation elongation factor activity (51.4%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" SLVSFIYIGKPLPEFQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0015031 (32.3%) GO:0005886 (33.9%) GO:0022857 (33.9%) protein transport (32.3%) plasma membrane (33.9%) transmembrane transporter activity (33.9%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) SDTSTSGGSDIIKEGN Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR021255 (100%) Putative auto-transporter adhesin, head GIN domain (100%) FQGNPDLIQIIGEDVDKIYLDMVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (24%) GO:0006166 (24%)" "GO:0000287 (24%) GO:0008973 (24%) GO:0004614 (4%)" "carbohydrate metabolic process (24%) purine ribonucleoside salvage (24%)" "magnesium ion binding (24%) phosphopentomutase activity (24%) phosphoglucomutase activity (4%)" "IPR005844 (12.9%) IPR016055 (12.9%) IPR016066 (12.9%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.9%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (12.9%) Alpha-D-phosphohexomutase, conserved site (12.9%)" TVLHLIPSGILR root 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.6%) GO:0046040 (16.6%) GO:0006164 (0%)" "GO:0005737 (16.6%) GO:0016020 (0%) GO:0005829 (0%)" "GO:0004019 (16.6%) GO:0005525 (16.6%) GO:0000287 (16.2%)" "'de novo' AMP biosynthetic process (16.6%) IMP metabolic process (16.6%) purine nucleotide biosynthetic process (0%)" "cytoplasm (16.6%) membrane (0%) cytosol (0%)" "adenylosuccinate synthase activity (16.6%) GTP binding (16.6%) magnesium ion binding (16.2%)" "IPR001114 (14.4%) IPR027417 (14.3%) IPR042109 (14.3%)" "Adenylosuccinate synthetase (14.4%) P-loop containing nucleoside triphosphate hydrolase (14.3%) Adenylosuccinate synthetase, domain 1 (14.3%)" VEGGVVDLNTLK Pseudomonadati Bacteria Pseudomonadati "GO:0006412 (24.8%) GO:0002181 (0.1%)" "GO:0022625 (24.8%) GO:0005840 (0.7%) GO:1990904 (0.2%)" "GO:0003735 (24.8%) GO:0019843 (24.8%)" "translation (24.8%) cytoplasmic translation (0.1%)" "cytosolic large ribosomal subunit (24.8%) ribosome (0.7%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (24.8%) rRNA binding (24.8%)" "IPR036227 (20.2%) IPR021131 (20.1%) IPR005749 (20.1%)" "Large ribosomal subunit protein uL15/eL18 superfamily (20.2%) Large ribosomal subunit protein uL15/eL18 (20.1%) Large ribosomal subunit protein uL15, bacteria (20.1%)" NIDIKDKVVCVSGSGNVAQYTVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006537 (26.3%) GO:0005829 (23.7%) "GO:0004354 (26.3%) GO:0000166 (23.7%)" glutamate biosynthetic process (26.3%) cytosol (23.7%) "glutamate dehydrogenase (NADP+) activity (26.3%) nucleotide binding (23.7%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" TAPGEEGVVDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" SKAPNSPVAGR root "2.3.1.8 (99.8%) 2.3.-.- (0.1%) 2.3.1.222 (0.1%)" "phosphate acetyltransferase (99.8%) Acyltransferases (0.1%) phosphate propanoyltransferase (0.1%)" "GO:0006085 (29%) GO:0006083 (0%) GO:0019413 (0%)" "GO:0005737 (33.8%) GO:0005829 (0%)" "GO:0008959 (35.9%) GO:0016407 (0.6%) GO:0016746 (0.4%)" "acetyl-CoA biosynthetic process (29%) acetate metabolic process (0%) acetate biosynthetic process (0%)" "cytoplasm (33.8%) cytosol (0%)" "phosphate acetyltransferase activity (35.9%) acetyltransferase activity (0.6%) acyltransferase activity (0.4%)" "IPR002505 (11.5%) IPR050500 (11.5%) IPR042112 (11.2%)" "Phosphate acetyl/butaryl transferase (11.5%) Phosphate Acetyltransferase/Butyryltransferase (11.5%) Phosphate acetyltransferase, domain 2 (11.2%)" GLRENGTFLLNTVWGAEELAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "1.2.7.1 (80%) 1.2.7.- (20%)" "pyruvate synthase (80%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (13%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (13%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" FESTKAEAATAPEPVAQPQRPR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.3%) GO:0005829 (14.3%) "GO:0003723 (14.3%) GO:0004386 (14.3%) GO:0005524 (14.3%)" DNA-templated transcription termination (14.3%) cytosol (14.3%) "RNA binding (14.3%) helicase activity (14.3%) ATP binding (14.3%)" "IPR000194 (10%) IPR003593 (10%) IPR004665 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) Transcription termination factor Rho (10%)" IKAENMTEDGHNKDAVER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.17.4.2 (100%) ribonucleoside-triphosphate reductase (thioredoxin) (100%) "GO:0006260 (16.5%) GO:0009265 (16.5%)" GO:0031250 (16.5%) "GO:0004748 (16.5%) GO:0005524 (16.5%) GO:0008998 (16.5%)" "DNA replication (16.5%) 2'-deoxyribonucleotide biosynthetic process (16.5%)" anaerobic ribonucleoside-triphosphate reductase complex (16.5%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.5%) ATP binding (16.5%) ribonucleoside-triphosphate reductase (thioredoxin) activity (16.5%)" "IPR005144 (50%) IPR012833 (50%)" "ATP-cone domain (50%) Ribonucleoside-triphosphate reductase, anaerobic (50%)" STTHNVPQGDLVLR root "3.1.2.- (75%) 3.1.2.20 (25%)" "Thiolester hydrolases (75%) acyl-CoA hydrolase (25%)" "GO:0006637 (24.6%) GO:0009062 (24.6%) GO:0044581 (0.4%)" "GO:0005829 (24.6%) GO:0005737 (0.4%)" "GO:0052816 (24.6%) GO:0016787 (0.7%)" "acyl-CoA metabolic process (24.6%) fatty acid catabolic process (24.6%) butyryl-CoA catabolic process to butyrate (0.4%)" "cytosol (24.6%) cytoplasm (0.4%)" "long-chain fatty acyl-CoA hydrolase activity (24.6%) hydrolase activity (0.7%)" "IPR006683 (25%) IPR029069 (25%) IPR033120 (25%)" "Thioesterase domain (25%) HotDog domain superfamily (25%) Hotdog acyl-CoA thioesterase (ACOT)-type domain (25%)" MFLSFPTTK Metazoa Eukaryota Metazoa "GO:0042744 (8.5%) GO:0098869 (0.2%) GO:0015671 (0.2%)" "GO:0005833 (9.7%) GO:0031838 (8.7%) GO:0072562 (8.3%)" "GO:0005344 (9.7%) GO:0019825 (9.7%) GO:0020037 (9.7%)" "hydrogen peroxide catabolic process (8.5%) cellular oxidant detoxification (0.2%) oxygen transport (0.2%)" "hemoglobin complex (9.7%) haptoglobin-hemoglobin complex (8.7%) blood microparticle (8.3%)" "oxygen carrier activity (9.7%) oxygen binding (9.7%) heme binding (9.7%)" "IPR000971 (17%) IPR002338 (17%) IPR009050 (17%)" "Globin (17%) Hemoglobin, alpha-type (17%) Globin-like superfamily (17%)" AAEQLEKEGINCNLTLLFSFAQAR root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (24.8%) GO:0009052 (0.1%)" "GO:0005829 (25%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0004801 (25%) GO:0016740 (0.2%) GO:0016744 (0%)" "carbohydrate metabolic process (25%) pentose-phosphate shunt (24.8%) pentose-phosphate shunt, non-oxidative branch (0.1%)" "cytosol (25%) cytoplasm (0%) membrane (0%)" "transaldolase activity (25%) transferase activity (0.2%) transketolase or transaldolase activity (0%)" "IPR001585 (25.1%) IPR018225 (25.1%) IPR013785 (25%)" "Transaldolase/Fructose-6-phosphate aldolase (25.1%) Transaldolase, active site (25.1%) Aldolase-type TIM barrel (25%)" VFNFCIQDSPRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (16.3%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (16.3%)" "IPR003953 (14.4%) IPR030664 (14.4%) IPR036188 (14.4%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.4%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (14.4%) FAD/NAD(P)-binding domain superfamily (14.4%)" MFIVGKPTIMGER root 3.4.11.18 (100%) methionyl aminopeptidase (100%) GO:0006508 (19.9%) GO:0005829 (19.9%) "GO:0070006 (19.9%) GO:0004239 (19.7%) GO:0005506 (17.4%)" proteolysis (19.9%) cytosol (19.9%) "metalloaminopeptidase activity (19.9%) initiator methionyl aminopeptidase activity (19.7%) iron ion binding (17.4%)" "IPR000994 (25%) IPR001714 (25%) IPR002467 (25%)" "Peptidase M24 (25%) Peptidase M24, methionine aminopeptidase (25%) Peptidase M24A, methionine aminopeptidase, subfamily 1 (25%)" AIIAQVGAAGPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0016884 (90%) GO:0016740 (10%)" "carbon-nitrogen ligase activity, with glutamine as amido-N-donor (90%) transferase activity (10%)" "IPR003789 (25%) IPR019004 (25%) IPR023168 (25%)" "Aspartyl/glutamyl-tRNA amidotransferase subunit B-like (25%) Uncharacterised protein YqeY/Aim41 (25%) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 (25%)" MDEILENVYAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0043093 (33.3%) "GO:0009898 (33.3%) GO:0032153 (33.3%)" FtsZ-dependent cytokinesis (33.3%) "cytoplasmic side of plasma membrane (33.3%) cell division site (33.3%)" "IPR003494 (25%) IPR020823 (25%) IPR043129 (25%)" "SHS2 domain inserted in FtsA (25%) Cell division protein FtsA (25%) ATPase, nucleotide binding domain (25%)" GYKVVSGGTDNHLFLVDLVDKNLTGK root 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (16.3%) GO:0035999 (15.4%) GO:0032259 (7.7%)" "GO:0005829 (16.3%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0004372 (16.3%) GO:0030170 (16.3%) GO:0008168 (7.7%)" "glycine biosynthetic process from serine (16.3%) tetrahydrofolate interconversion (15.4%) methylation (7.7%)" "cytosol (16.3%) cytoplasm (0.1%) membrane (0.1%)" "glycine hydroxymethyltransferase activity (16.3%) pyridoxal phosphate binding (16.3%) methyltransferase activity (7.7%)" "IPR015422 (14.5%) IPR015424 (14.5%) IPR039429 (14.5%)" "Pyridoxal phosphate-dependent transferase, small domain (14.5%) Pyridoxal phosphate-dependent transferase (14.5%) Serine hydroxymethyltransferase-like domain (14.5%)" VTAPQISWGSTDIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR025150 (50%) IPR053850 (50%)" "Glycoside hydrolase 123, catalytic domain (50%) Glycoside hydrolase 123, N-terminal domain (50%)" AVEGTPFECLKDAFVGPTLIAYSMEHPGAAAR Pseudomonadati Bacteria Pseudomonadati "GO:0006412 (23.7%) GO:0006417 (0.8%) GO:0002181 (0.3%)" "GO:0015934 (23.7%) GO:0005840 (2.7%) GO:0005737 (0.3%)" "GO:0003735 (23.7%) GO:0070180 (23.1%) GO:0019843 (0.5%)" "translation (23.7%) regulation of translation (0.8%) cytoplasmic translation (0.3%)" "large ribosomal subunit (23.7%) ribosome (2.7%) cytoplasm (0.3%)" "structural constituent of ribosome (23.7%) large ribosomal subunit rRNA binding (23.1%) rRNA binding (0.5%)" "IPR001790 (20.2%) IPR043141 (20.2%) IPR047865 (20.2%)" "Large ribosomal subunit protein uL10 (20.2%) Large ribosomal subunit protein uL10-like domain superfamily (20.2%) Large ribosomal subunit protein uL10, bacteria/organella (20.2%)" VLVVEDNALLR root 2.7.13.3 (100%) histidine kinase (100%) "GO:0006355 (2.9%) GO:0009891 (2%) GO:0000160 (0.2%)" "GO:0005829 (19.3%) GO:0032993 (19.3%) GO:0005886 (0.2%)" "GO:0000156 (19.3%) GO:0000976 (19.3%) GO:0001216 (16.5%)" "regulation of DNA-templated transcription (2.9%) positive regulation of biosynthetic process (2%) phosphorelay signal transduction system (0.2%)" "cytosol (19.3%) protein-DNA complex (19.3%) plasma membrane (0.2%)" "phosphorelay response regulator activity (19.3%) transcription cis-regulatory region binding (19.3%) DNA-binding transcription activator activity (16.5%)" "IPR001789 (19.9%) IPR011006 (19.9%) IPR039420 (19.5%)" "Signal transduction response regulator, receiver domain (19.9%) CheY-like superfamily (19.9%) Transcriptional regulatory protein WalR-like (19.5%)" KAEKIDMEAAGEAPANK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.1%) "GO:0022627 (32.3%) GO:0005840 (1.5%)" GO:0003735 (33.1%) translation (33.1%) "cytosolic small ribosomal subunit (32.3%) ribosome (1.5%)" structural constituent of ribosome (33.1%) "IPR001865 (25.3%) IPR023591 (25.3%) IPR005706 (24.7%)" "Small ribosomal subunit protein uS2 (25.3%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.3%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (24.7%)" AGAENKPAELNDYAVVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0000166 (25%) GO:0047850 (25%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "nucleotide binding (25%) diaminopimelate dehydrogenase activity (25%)" "IPR000683 (25%) IPR010190 (25%) IPR032094 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Diaminopimelate dehydrogenase, Ddh (25%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25%)" FLKEVCLLNQEDIMDAKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006414 (1.3%) GO:0005737 (49.4%) GO:0003746 (49.4%) translational elongation (1.3%) cytoplasm (49.4%) translation elongation factor activity (49.4%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" LQVEHPITEEVVGVDLVKEQIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.3.4.14 (88.3%) 6.4.1.2 (10.6%) 6.4.1.1 (1.1%)" "biotin carboxylase (88.3%) acetyl-CoA carboxylase (10.6%) pyruvate carboxylase (1.1%)" GO:2001295 (15.4%) "GO:0005524 (23.3%) GO:0046872 (23.3%) GO:0003989 (16.7%)" malonyl-CoA biosynthetic process (15.4%) "ATP binding (23.3%) metal ion binding (23.3%) acetyl-CoA carboxylase activity (16.7%)" "IPR005479 (13.1%) IPR011761 (13.1%) IPR011764 (13.1%)" "Carbamoyl phosphate synthase, ATP-binding domain (13.1%) ATP-grasp fold (13.1%) Biotin carboxylation domain (13.1%)" VTYGEHVFDFGKPFEK root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.6%) GO:0006418 (0.1%) GO:0034605 (0.1%)" "GO:0005829 (14.6%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0000049 (14.6%) GO:0004824 (14.6%) GO:0005524 (14.6%)" "lysyl-tRNA aminoacylation (14.6%) tRNA aminoacylation for protein translation (0.1%) cellular response to heat (0.1%)" "cytosol (14.6%) cytoplasm (0.1%) membrane (0.1%)" "tRNA binding (14.6%) lysine-tRNA ligase activity (14.6%) ATP binding (14.6%)" "IPR004364 (11.8%) IPR045864 (11.8%) IPR006195 (11.7%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (11.8%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.8%) Aminoacyl-tRNA synthetase, class II (11.7%)" LLVDACYSPVER root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.6%) GO:0006352 (0%) GO:0006879 (0%)" "GO:0000428 (16.8%) GO:0005737 (16.4%) GO:0000345 (0%)" "GO:0046983 (16.6%) GO:0003899 (16.6%) GO:0003677 (16.5%)" "DNA-templated transcription (16.6%) DNA-templated transcription initiation (0%) intracellular iron ion homeostasis (0%)" "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.4%) cytosolic DNA-directed RNA polymerase complex (0%)" "protein dimerization activity (16.6%) DNA-directed RNA polymerase activity (16.6%) DNA binding (16.5%)" "IPR011263 (16.8%) IPR036603 (16.8%) IPR036643 (16.7%)" "DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) RNA polymerase, RBP11-like subunit (16.8%) DNA-directed RNA polymerase, insert domain superfamily (16.7%)" RFNIGEKLEDVRVER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043043 (33%) "GO:0005829 (32%) GO:0005737 (1.5%)" GO:0003746 (33.6%) peptide biosynthetic process (33%) "cytosol (32%) cytoplasm (1.5%)" translation elongation factor activity (33.6%) "IPR020599 (11.2%) IPR001059 (11.1%) IPR008991 (11.1%)" "Translation elongation factor P/YeiP (11.2%) Translation elongation factor P/YeiP, central (11.1%) Translation protein SH3-like domain superfamily (11.1%)" IAPLIVEMGCFAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.3.1 (50%) 6.4.1.1 (50%)" "methylmalonyl-CoA carboxytransferase (50%) pyruvate carboxylase (50%)" GO:0006094 (21.2%) GO:0005737 (21.2%) "GO:0004736 (25.3%) GO:0003824 (24.2%) GO:0047154 (6.1%)" gluconeogenesis (21.2%) cytoplasm (21.2%) "pyruvate carboxylase activity (25.3%) catalytic activity (24.2%) methylmalonyl-CoA carboxytransferase activity (6.1%)" "IPR013785 (25%) IPR000891 (24.5%) IPR003379 (24.5%)" "Aldolase-type TIM barrel (25%) Pyruvate carboxyltransferase (24.5%) Carboxylase, conserved domain (24.5%)" DKQFVLEADQVIFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR025347 (100%) Protein of unknown function DUF4251 (100%) LGWSQEEVDEKLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006537 (26.3%) GO:0005829 (26.3%) "GO:0004354 (26.3%) GO:0000166 (21.1%)" glutamate biosynthetic process (26.3%) cytosol (26.3%) "glutamate dehydrogenase (NADP+) activity (26.3%) nucleotide binding (21.1%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" NVVGVTTNPSIFQK Actinomycetes Bacteria Bacillati Actinomycetota Actinomycetes 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25.1%) GO:0006098 (24.9%)" GO:0005737 (24.9%) GO:0004801 (25.1%) "carbohydrate metabolic process (25.1%) pentose-phosphate shunt (24.9%)" cytoplasm (24.9%) transaldolase activity (25.1%) "IPR001585 (25%) IPR013785 (25%) IPR018225 (25%)" "Transaldolase/Fructose-6-phosphate aldolase (25%) Aldolase-type TIM barrel (25%) Transaldolase, active site (25%)" EQFDKGLQILK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" IYLIDEIHTPDSSR root 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) "GO:0006189 (24.9%) GO:0006164 (0.1%) GO:0006508 (0.1%)" "GO:0005737 (24.5%) GO:0009570 (0.3%) GO:0005829 (0.1%)" "GO:0004639 (24.9%) GO:0005524 (24.9%) GO:0017050 (0.1%)" "'de novo' IMP biosynthetic process (24.9%) purine nucleotide biosynthetic process (0.1%) proteolysis (0.1%)" "cytoplasm (24.5%) chloroplast stroma (0.3%) cytosol (0.1%)" "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (24.9%) ATP binding (24.9%) obsolete D-erythro-sphingosine kinase activity (0.1%)" "IPR018236 (48.7%) IPR028923 (48.7%) IPR001636 (1.6%)" "SAICAR synthetase, conserved site (48.7%) SAICAR synthetase/ADE2, N-terminal (48.7%) Phosphoribosylaminoimidazole-succinocarboxamide synthase (1.6%)" VTSQSSEDNYQSLEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0034605 (19.9%) GO:0042026 (19.3%) GO:0006508 (0.6%)" GO:0005737 (19.9%) "GO:0005524 (19.9%) GO:0016887 (19.9%) GO:0008233 (0.6%)" "cellular response to heat (19.9%) protein refolding (19.3%) proteolysis (0.6%)" cytoplasm (19.9%) "ATP binding (19.9%) ATP hydrolysis activity (19.9%) peptidase activity (0.6%)" "IPR003593 (8.4%) IPR003959 (8.4%) IPR004176 (8.4%)" "AAA+ ATPase domain (8.4%) ATPase, AAA-type, core (8.4%) Clp, repeat (R) N-terminal domain (8.4%)" GTAQNPDIYFQTR Bacteria Bacteria "1.2.7.1 (93.3%) 1.2.7.- (6.7%)" "pyruvate synthase (93.3%) With an iron-sulfur protein as acceptor (6.7%)" "GO:0006979 (16.8%) GO:0022900 (16.2%) GO:0044281 (1.7%)" "GO:0051539 (16.8%) GO:0005506 (16.2%) GO:0030976 (14.8%)" "response to oxidative stress (16.8%) electron transport chain (16.2%) small molecule metabolic process (1.7%)" "4 iron, 4 sulfur cluster binding (16.8%) iron ion binding (16.2%) thiamine pyrophosphate binding (14.8%)" "IPR009014 (7.9%) IPR029061 (7.9%) IPR033412 (7.9%)" "Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.9%) Thiamin diphosphate-binding fold (7.9%) Pyruvate:ferredoxin oxidoreductase, core domain II (7.9%)" SDDNRNNVIGLLEDPKSVVKK root "6.1.1.2 (99.5%) 3.1.3.18 (0.3%) 2.1.1.72 (0.1%)" "tryptophan--tRNA ligase (99.5%) phosphoglycolate phosphatase (0.3%) site-specific DNA-methyltransferase (adenine-specific) (0.1%)" "GO:0006436 (24.7%) GO:0005975 (0.1%) GO:0006418 (0.1%)" "GO:0005829 (24.7%) GO:0005739 (0.1%)" "GO:0004830 (24.7%) GO:0005524 (24.7%) GO:0016874 (0.3%)" "tryptophanyl-tRNA aminoacylation (24.7%) carbohydrate metabolic process (0.1%) tRNA aminoacylation for protein translation (0.1%)" "cytosol (24.7%) mitochondrion (0.1%)" "tryptophan-tRNA ligase activity (24.7%) ATP binding (24.7%) ligase activity (0.3%)" "IPR002305 (17.1%) IPR050203 (17%) IPR014729 (16.9%)" "Aminoacyl-tRNA synthetase, class Ic (17.1%) Tryptophan--tRNA ligase (17%) Rossmann-like alpha/beta/alpha sandwich fold (16.9%)" ADIALPCATQNELNGEDAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.4.1.2 (66.7%) 1.4.1.4 (33.3%)" "glutamate dehydrogenase (66.7%) glutamate dehydrogenase (NADP(+)) (33.3%)" GO:0006537 (25.8%) GO:0005829 (25.8%) "GO:0004354 (25.8%) GO:0000166 (21.2%) GO:0004352 (1.5%)" glutamate biosynthetic process (25.8%) cytosol (25.8%) "glutamate dehydrogenase (NADP+) activity (25.8%) nucleotide binding (21.2%) glutamate dehydrogenase (NAD+) activity (1.5%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" MVFITAGMGGGTGTGAAPVIAR Bacteria Bacteria "GO:0000917 (14.4%) GO:0043093 (13.5%) GO:0051258 (13.5%)" "GO:0005737 (14.6%) GO:0032153 (14.6%)" "GO:0003924 (14.6%) GO:0005525 (14.6%)" "division septum assembly (14.4%) FtsZ-dependent cytokinesis (13.5%) protein polymerization (13.5%)" "cytoplasm (14.6%) cell division site (14.6%)" "GTPase activity (14.6%) GTP binding (14.6%)" "IPR003008 (11.1%) IPR036525 (11.1%) IPR045061 (11.1%)" "Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, GTPase domain superfamily (11.1%) Tubulin-like protein FtsZ/CetZ (11.1%)" VYEGNTLKDEYTTR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) "GO:0004553 (41.4%) GO:0004565 (8.6%)" carbohydrate metabolic process (50%) "hydrolase activity, hydrolyzing O-glycosyl compounds (41.4%) beta-galactosidase activity (8.6%)" "IPR006102 (7.8%) IPR006103 (7.8%) IPR006104 (7.8%)" "Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.8%) Glycoside hydrolase family 2, catalytic domain (7.8%) Glycosyl hydrolases family 2, sugar binding domain (7.8%)" IKVEEMVAGDIGCTVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (25%) "GO:0003746 (25.4%) GO:0005525 (25%) GO:0003924 (24.6%)" ribosome disassembly (25%) "translation elongation factor activity (25.4%) GTP binding (25%) GTPase activity (24.6%)" "IPR000640 (7.6%) IPR005517 (7.6%) IPR009000 (7.6%)" "Elongation factor EFG, domain V-like (7.6%) Translation elongation factor EFG/EF2, domain IV (7.6%) Translation protein, beta-barrel domain superfamily (7.6%)" DDTPMFVCGVNTDSYAGQKIVSNASCTTNCLAPLAK Alistipes onderdonkii Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Rikenellaceae Alistipes Alistipes onderdonkii 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0006006 (25%) "GO:0016620 (25%) GO:0050661 (25%) GO:0051287 (25%)" glucose metabolic process (25%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (25%) NADP binding (25%) NAD binding (25%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" KAPEFHAPAVVNGNEIIEDFSLEQYVGKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" GNVAAAETYLGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" SVDSIHKELGHIMWDFVGMGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (17%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (17%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" DGVTVAKEVELADAFQNTGAQLVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.4%) GO:0005737 (15.6%) "GO:0005524 (17.4%) GO:0140662 (17.4%) GO:0016853 (16.5%)" protein refolding (17.4%) cytoplasm (15.6%) "ATP binding (17.4%) ATP-dependent protein folding chaperone (17.4%) isomerase activity (16.5%)" "IPR001844 (17.3%) IPR002423 (17.3%) IPR018370 (16.4%)" "Chaperonin Cpn60/GroEL (17.3%) Chaperonin Cpn60/GroEL/TCP-1 family (17.3%) Chaperonin Cpn60, conserved site (16.4%)" TDFAPVDQIPDGWEGLDIGPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" NAYDPQFTVDGKYDEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.3%) GO:0005737 (14.1%) "GO:0004822 (14.5%) GO:0005524 (14.5%) GO:0002161 (14.3%)" isoleucyl-tRNA aminoacylation (14.3%) cytoplasm (14.1%) "isoleucine-tRNA ligase activity (14.5%) ATP binding (14.5%) aminoacyl-tRNA deacylase activity (14.3%)" "IPR002300 (12.7%) IPR002301 (12.7%) IPR023586 (12.7%)" "Aminoacyl-tRNA synthetase, class Ia (12.7%) Isoleucine-tRNA ligase (12.7%) Isoleucine-tRNA ligase, type 2 (12.7%)" IYDDPDMSLDLYTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" ALGYAVTEVKGDELK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0044718 (2.2%) GO:0009279 (93.3%) "GO:0004180 (2.2%) GO:0015344 (2.2%)" siderophore transmembrane transport (2.2%) cell outer membrane (93.3%) "carboxypeptidase activity (2.2%) siderophore uptake transmembrane transporter activity (2.2%)" "IPR012910 (14.8%) IPR037066 (14.8%) IPR039426 (14.8%)" "TonB-dependent receptor, plug domain (14.8%) TonB-dependent receptor, plug domain superfamily (14.8%) TonB-dependent receptor-like (14.8%)" FSVLTPVGLLPIAVAGFDIEKLVEGAR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.2%) GO:0006096 (14.2%) GO:0051156 (14.2%)" GO:0005829 (14.2%) "GO:0004347 (14.2%) GO:0048029 (14.2%) GO:0097367 (14.2%)" "gluconeogenesis (14.2%) glycolytic process (14.2%) glucose 6-phosphate metabolic process (14.2%)" cytosol (14.2%) "glucose-6-phosphate isomerase activity (14.2%) monosaccharide binding (14.2%) carbohydrate derivative binding (14.2%)" "IPR001672 (19.9%) IPR018189 (19.9%) IPR035476 (19.9%)" "Phosphoglucose isomerase (PGI) (19.9%) Phosphoglucose isomerase, conserved site (19.9%) Phosphoglucose isomerase, SIS domain 1 (19.9%)" LTELLPASLGIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "4.2.1.- (50%) 4.2.1.1 (50%)" "Hydro-lyases (50%) carbonic anhydrase (50%)" "GO:0004089 (50%) GO:0008270 (50%)" "carbonate dehydratase activity (50%) zinc ion binding (50%)" "IPR001765 (50%) IPR036874 (50%)" "Carbonic anhydrase (50%) Carbonic anhydrase superfamily (50%)" EIPASALYGVQTLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.2%) IPR008948 (14.2%) IPR018951 (14.2%)" "Fumarate lyase family (14.2%) L-Aspartase-like (14.2%) Fumarase C, C-terminal (14.2%)" SKFDNLYGCR root "3.13.2.1 (94.2%) 3.3.1.1 (5.7%) 2.5.1.6 (0%)" "adenosylhomocysteinase (94.2%) Transferred entry: 3.13.2.1 (5.7%) methionine adenosyltransferase (0%)" "GO:0006730 (22.5%) GO:0033353 (22.2%) GO:0071269 (8.7%)" "GO:0005829 (22.2%) GO:0016020 (0%) GO:0005852 (0%)" "GO:0004013 (22.4%) GO:0016787 (0.2%) GO:0051287 (0.1%)" "one-carbon metabolic process (22.5%) S-adenosylmethionine cycle (22.2%) L-homocysteine biosynthetic process (8.7%)" "cytosol (22.2%) membrane (0%) eukaryotic translation initiation factor 3 complex (0%)" "adenosylhomocysteinase activity (22.4%) hydrolase activity (0.2%) NAD binding (0.1%)" "IPR000043 (20%) IPR015878 (20%) IPR042172 (19.9%)" "Adenosylhomocysteinase-like (20%) S-adenosyl-L-homocysteine hydrolase, NAD binding domain (20%) Adenosylhomocysteinase-like superfamily (19.9%)" EYDTFCGAIDKLEAELK root 1.-.-.- (100%) Oxidoreductases (100%) GO:0051302 (0.2%) GO:0005829 (24.9%) "GO:0010181 (25.6%) GO:0050660 (24.7%) GO:0016491 (23.7%)" regulation of cell division (0.2%) cytosol (24.9%) "FMN binding (25.6%) flavin adenine dinucleotide binding (24.7%) oxidoreductase activity (23.7%)" "IPR008254 (48.6%) IPR029039 (48.6%) IPR001094 (2.8%)" "Flavodoxin/nitric oxide synthase (48.6%) Flavoprotein-like superfamily (48.6%) Flavodoxin-like (2.8%)" EIDGEKCEPVEQLTVNLPEECSSR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0000027 (10%) GO:0009409 (10%) GO:0010467 (10%)" "GO:0005829 (10%) GO:1990904 (10%)" "GO:0000049 (10%) GO:0003924 (10%) GO:0005525 (10%)" "ribosomal large subunit assembly (10%) response to cold (10%) gene expression (10%)" "cytosol (10%) ribonucleoprotein complex (10%)" "tRNA binding (10%) GTPase activity (10%) GTP binding (10%)" "IPR000640 (6.7%) IPR000795 (6.7%) IPR004161 (6.7%)" "Elongation factor EFG, domain V-like (6.7%) Translational (tr)-type GTP-binding domain (6.7%) Translation elongation factor EFTu-like, domain 2 (6.7%)" VILPDPVFNDQKVSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (20.2%) GO:0000028 (0.2%)" "GO:0015935 (20%) GO:0005840 (0.2%) GO:0022627 (0.2%)" "GO:0003735 (20.2%) GO:0019843 (20.2%) GO:0000049 (18.7%)" "translation (20.2%) ribosomal small subunit assembly (0.2%)" "small ribosomal subunit (20%) ribosome (0.2%) cytosolic small ribosomal subunit (0.2%)" "structural constituent of ribosome (20.2%) rRNA binding (20.2%) tRNA binding (18.7%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" LSAEIVDAFNNQGGAFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (20%) GO:0015935 (20%) "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) small ribosomal subunit (20%) "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" VSYPIYHIDNIVKPVSK root 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.4%) "GO:0005829 (17.4%) GO:0005737 (0%)" "GO:0004612 (17.4%) GO:0005524 (17.4%) GO:0046872 (16.8%)" gluconeogenesis (17.4%) "cytosol (17.4%) cytoplasm (0%)" "phosphoenolpyruvate carboxykinase (ATP) activity (17.4%) ATP binding (17.4%) metal ion binding (16.8%)" "IPR001272 (25.3%) IPR013035 (25.3%) IPR015994 (24.9%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.3%) Phosphoenolpyruvate carboxykinase, C-terminal (25.3%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (24.9%)" ANYYTDIPELK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.8.1 (66.7%) 1.3.8.- (33.3%)" "short-chain acyl-CoA dehydrogenase (66.7%) With a flavin as acceptor (33.3%)" "GO:0050660 (50%) GO:0003995 (46.4%) GO:0016937 (3.6%)" "flavin adenine dinucleotide binding (50%) acyl-CoA dehydrogenase activity (46.4%) short-chain fatty acyl-CoA dehydrogenase activity (3.6%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009075 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.1%)" DRVDDALHATR root "5.6.1.7 (100%) 2.3.1.41 (0%)" "chaperonin ATPase (100%) beta-ketoacyl-[acyl-carrier-protein] synthase I (0%)" "GO:0042026 (16.9%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (16.3%) GO:1990220 (0%)" "GO:0005524 (16.9%) GO:0140662 (16.9%) GO:0016853 (16.7%)" "protein refolding (16.9%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (16.3%) GroEL-GroES complex (0%)" "ATP binding (16.9%) ATP-dependent protein folding chaperone (16.9%) isomerase activity (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR027409 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) GroEL-like apical domain superfamily (16.7%)" SSIGNIQSGGSQSLYR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR007139 (100%) Protein of unknown function DUF349 (100%) ERTKKEDDDALNANVAGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" EKYIGSEENWDKAEQAIIEACEEK TFFGYNDMADAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "1.3.1.9 (99.1%) 1.3.1.10 (0.9%)" "enoyl-[acyl-carrier-protein] reductase (NADH) (99.1%) enoyl-[acyl-carrier-protein] reductase (NADPH, Si-specific) (0.9%)" GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.5%) IPR014358 (33.5%) IPR036291 (32.9%)" "Short-chain dehydrogenase/reductase SDR (33.5%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.5%) NAD(P)-binding domain superfamily (32.9%)" IIGETTDKYCQAYFSYDSKK Alistipes inops Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Rikenellaceae Alistipes Alistipes inops MKHYNFDEIIDR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.4.1.13 (100%) cysteine-S-conjugate beta-lyase (100%) "GO:0016829 (50%) GO:0030170 (50%)" "lyase activity (50%) pyridoxal phosphate binding (50%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" AIEEYFDFPEPNELVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.4.1.7 (100%) 2-oxoglutarate carboxylase (100%) GO:0006094 (32%) GO:0005737 (32%) "GO:0004736 (32%) GO:0034029 (4%)" gluconeogenesis (32%) cytoplasm (32%) "pyruvate carboxylase activity (32%) 2-oxoglutarate carboxylase activity (4%)" "IPR000891 (25%) IPR003379 (25%) IPR013785 (25%)" "Pyruvate carboxyltransferase (25%) Carboxylase, conserved domain (25%) Aldolase-type TIM barrel (25%)" AFTSEEFTHFLEELTK root "4.2.1.11 (99.8%) 6.3.4.2 (0.2%)" "phosphopyruvate hydratase (99.8%) CTP synthase (glutamine hydrolyzing) (0.2%)" "GO:0006096 (16.7%) GO:0006396 (0%) GO:0006401 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (15.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.1%)" "glycolytic process (16.7%) RNA processing (0%) RNA catabolic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (15.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.1%)" "IPR000941 (16.9%) IPR020810 (16.9%) IPR036849 (16.9%)" "Enolase (16.9%) Enolase, C-terminal TIM barrel domain (16.9%) Enolase-like, C-terminal domain superfamily (16.9%)" TSHNMPAPELIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) "GO:0004553 (46.2%) GO:0004565 (3.8%)" carbohydrate metabolic process (50%) "hydrolase activity, hydrolyzing O-glycosyl compounds (46.2%) beta-galactosidase activity (3.8%)" "IPR006101 (7.7%) IPR006102 (7.7%) IPR006103 (7.7%)" "Glycoside hydrolase, family 2 (7.7%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.7%) Glycoside hydrolase family 2, catalytic domain (7.7%)" QAVTNPQNTLFAIKR root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0051301 (0.2%) GO:0042026 (0.1%) GO:0051085 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0.1%) GO:0005886 (0%)" "GO:0005524 (26.3%) GO:0140662 (26.3%) GO:0051082 (25%)" "cell division (0.2%) protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytosol (0.1%) cytoplasm (0.1%) plasma membrane (0%)" "ATP binding (26.3%) ATP-dependent protein folding chaperone (26.3%) unfolded protein binding (25%)" "IPR013126 (17.1%) IPR043129 (17.1%) IPR018181 (17%)" "Heat shock protein 70 family (17.1%) ATPase, nucleotide binding domain (17.1%) Heat shock protein 70, conserved site (17%)" EGDLEQAMAAYGVVTSVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0003723 (100%) RNA binding (100%) "IPR000504 (25%) IPR012677 (25%) IPR035979 (25%)" "RNA recognition motif domain (25%) Nucleotide-binding alpha-beta plait domain superfamily (25%) RNA-binding domain superfamily (25%)" LGLFANIRPVQTFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.85 (100%) 3-isopropylmalate dehydrogenase (100%) GO:0009098 (20%) GO:0005829 (20%) "GO:0000287 (20%) GO:0003862 (20%) GO:0051287 (20%)" L-leucine biosynthetic process (20%) cytosol (20%) "magnesium ion binding (20%) 3-isopropylmalate dehydrogenase activity (20%) NAD binding (20%)" "IPR004429 (33.3%) IPR019818 (33.3%) IPR024084 (33.3%)" "Isopropylmalate dehydrogenase (33.3%) Isocitrate/isopropylmalate dehydrogenase, conserved site (33.3%) Isopropylmalate dehydrogenase-like domain (33.3%)" GHNSMLVLRPADAEETTVAWK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.2.1.1 (98.3%) 2.2.1.- (1.7%)" "transketolase (98.3%) Transketolases and transaldolases (1.7%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" VLKDKVPVQQTGTYSEATKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GIIVCDDAATAELK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (13.3%) GO:0005737 (1%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (13.3%) cytoplasm (1%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" AVKDGLAEDEQKNAEAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006415 (33.1%) GO:0006412 (0.8%)" GO:0005737 (33.1%) GO:0043023 (33.1%) "translational termination (33.1%) translation (0.8%)" cytoplasm (33.1%) ribosomal large subunit binding (33.1%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" VLDGSVAVFCAK Bacillota Bacteria Bacillati Bacillota "GO:0032790 (20%) GO:0006412 (0.2%)" GO:0005737 (19.8%) "GO:0003924 (20%) GO:0005525 (20%) GO:0003746 (19.8%)" "ribosome disassembly (20%) translation (0.2%)" cytoplasm (19.8%) "GTPase activity (20%) GTP binding (20%) translation elongation factor activity (19.8%)" "IPR000795 (6.3%) IPR005225 (6.3%) IPR027417 (6.3%)" "Translational (tr)-type GTP-binding domain (6.3%) Small GTP-binding domain (6.3%) P-loop containing nucleoside triphosphate hydrolase (6.3%)" KWYHLMTLGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (29.4%) GO:0003863 (4%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (29.4%) branched-chain 2-oxo acid dehydrogenase activity (4%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" IKHEIGSAYPGDEVREIEVR root "GO:0008360 (24.9%) GO:0000902 (24.8%) GO:0051301 (0.1%)" "GO:0005737 (25%) GO:0005856 (0%) GO:0005886 (0%)" "GO:0005524 (24.9%) GO:0042802 (0%)" "regulation of cell shape (24.9%) cell morphogenesis (24.8%) cell division (0.1%)" "cytoplasm (25%) cytoskeleton (0%) plasma membrane (0%)" "ATP binding (24.9%) identical protein binding (0%)" "IPR043129 (33.4%) IPR056546 (33.4%) IPR004753 (33.2%)" "ATPase, nucleotide binding domain (33.4%) MreB/MamK-like (33.4%) Cell shape determining protein MreB (33.2%)" LIDKTEHPGPLPETVVAHLDK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.1.1.50 (100%) adenosylmethionine decarboxylase (100%) "GO:0008295 (33%) GO:0097264 (0.3%)" GO:0005829 (33%) "GO:0004014 (33%) GO:0016829 (0.6%) GO:0000287 (0.3%)" "spermidine biosynthetic process (33%) self proteolysis (0.3%)" cytosol (33%) "adenosylmethionine decarboxylase activity (33%) lyase activity (0.6%) magnesium ion binding (0.3%)" "IPR003826 (33.5%) IPR016067 (33.5%) IPR009165 (33%)" "S-adenosylmethionine decarboxylase family, prokaryotic (33.5%) S-adenosylmethionine decarboxylase, core (33.5%) S-adenosylmethionine decarboxylase, bacterial (33%)" EQVVVKEDNAQMR Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR005996 (33.3%) IPR016082 (33.3%) IPR036919 (33.3%)" "Large ribosomal subunit protein uL30, bacteria (33.3%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (33.3%) Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily (33.3%)" LSSDLVGATSDTSCLVGYASAMKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.3%) IPR008948 (14.3%) IPR018951 (14.3%)" "Fumarate lyase family (14.3%) L-Aspartase-like (14.3%) Fumarase C, C-terminal (14.3%)" GTTAMQIAESISSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004829 (16.7%) GO:0005524 (16.7%)" threonyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) threonine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" LLFYADGEKR root "GO:0002181 (19.4%) GO:0006412 (0.4%) GO:0032543 (0.2%)" "GO:0015934 (19.8%) GO:0005762 (0.2%) GO:0005840 (0.1%)" "GO:0003735 (20%) GO:0016740 (20%) GO:0019843 (18.8%)" "cytoplasmic translation (19.4%) translation (0.4%) mitochondrial translation (0.2%)" "large ribosomal subunit (19.8%) mitochondrial large ribosomal subunit (0.2%) ribosome (0.1%)" "structural constituent of ribosome (20%) transferase activity (20%) rRNA binding (18.8%)" "IPR002171 (11.2%) IPR005880 (11.2%) IPR008991 (11.2%)" "Large ribosomal subunit protein uL2 (11.2%) Large ribosomal subunit protein uL2, bacteria/organella (11.2%) Translation protein SH3-like domain superfamily (11.2%)" VDFDADKLKENLEALLVALKK root "GO:0006417 (16.9%) GO:0006412 (16.4%) GO:0000027 (0%)" "GO:0022625 (16.9%) GO:0005840 (0.2%) GO:0005737 (0%)" "GO:0000049 (16.4%) GO:0003735 (16.4%) GO:0019843 (16.4%)" "regulation of translation (16.9%) translation (16.4%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (16.9%) ribosome (0.2%) cytoplasm (0%)" "tRNA binding (16.4%) structural constituent of ribosome (16.4%) rRNA binding (16.4%)" "IPR023674 (16.9%) IPR028364 (16.9%) IPR016095 (16.7%)" "Ribosomal protein uL1-like (16.9%) Ribosomal protein uL1/ribosomal biogenesis protein (16.9%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" AALSMTIPLGTGVHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0000166 (25%) GO:0047850 (25%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "nucleotide binding (25%) diaminopimelate dehydrogenase activity (25%)" "IPR000683 (25%) IPR010190 (25%) IPR032094 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Diaminopimelate dehydrogenase, Ddh (25%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25%)" AAAAGENEEWTTDYPHFADVADQEGFPAIATMYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005506 (50%) GO:0016491 (50%)" "iron ion binding (50%) oxidoreductase activity (50%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" ADLSKPVNLANMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.21.- (100%) Serine endopeptidases (100%) GO:0006508 (32.7%) GO:0005737 (32.7%) "GO:0008236 (32.7%) GO:0003743 (1.8%)" proteolysis (32.7%) cytoplasm (32.7%) "serine-type peptidase activity (32.7%) translation initiation factor activity (1.8%)" "IPR005151 (12.5%) IPR011659 (12.5%) IPR012393 (12.5%)" "Tail specific protease (12.5%) WD40-like beta-propeller (12.5%) Tricorn protease (12.5%)" IITCHLGNGASIAAVDGGK Clostridia Bacteria Bacillati Bacillota Clostridia 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (17.4%) GO:0006085 (15.9%)" GO:0005737 (15.9%) "GO:0005524 (17.4%) GO:0008776 (17.4%) GO:0000287 (15.9%)" "acetate metabolic process (17.4%) acetyl-CoA biosynthetic process (15.9%)" cytoplasm (15.9%) "ATP binding (17.4%) acetate kinase activity (17.4%) magnesium ion binding (15.9%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" TIGLVPTMGALHAGHASLVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.2.1 (100%) pantoate--beta-alanine ligase (AMP-forming) (100%) GO:0015940 (25%) GO:0005829 (25%) "GO:0004592 (25%) GO:0005524 (25%)" pantothenate biosynthetic process (25%) cytosol (25%) "pantoate-beta-alanine ligase activity (25%) ATP binding (25%)" "IPR003721 (33%) IPR014729 (33%) IPR042176 (33%)" "Pantoate-beta-alanine ligase (33%) Rossmann-like alpha/beta/alpha sandwich fold (33%) Pantoate-beta-alanine ligase, C-terminal domain (33%)" INDLGFIETPYRK Pseudomonadati Bacteria Pseudomonadati 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.9%) IPR007645 (7.9%) IPR010243 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) RNA polymerase Rpb2, domain 3 (7.9%) DNA-directed RNA polymerase beta subunit, bacterial-type (7.9%)" NNFVLEFLDYYIDPPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.8%) GO:0006508 (0.6%)" GO:0000428 (19.9%) "GO:0003899 (19.8%) GO:0003677 (19.8%) GO:0032549 (19.5%)" "DNA-templated transcription (19.8%) proteolysis (0.6%)" DNA-directed RNA polymerase complex (19.9%) "DNA-directed RNA polymerase activity (19.8%) DNA binding (19.8%) ribonucleoside binding (19.5%)" "IPR007644 (8.1%) IPR007642 (8%) IPR015712 (8%)" "RNA polymerase, beta subunit, protrusion (8.1%) RNA polymerase Rpb2, domain 2 (8%) DNA-directed RNA polymerase, subunit 2 (8%)" EGFIGFQDHGDDVWFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016787 (100%) hydrolase activity (100%) IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) VLSISIAAAKEQDYEEFGKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (25%) IPR022615 (25%) IPR056147 (25%)" "Na(+)-translocating NADH-quinone reductase subunit A (25%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (25%) NqrA, N-terminal barrel-sandwich hybrid domain (25%)" GGYFPVPPVDSAQDIR root 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (14.5%) GO:0019740 (14.5%) GO:0009314 (0%)" "GO:0005737 (14.5%) GO:0016020 (14.4%) GO:0005829 (0%)" "GO:0004356 (14.6%) GO:0005524 (13.7%) GO:0046872 (13.6%)" "glutamine biosynthetic process (14.5%) nitrogen utilization (14.5%) response to radiation (0%)" "cytoplasm (14.5%) membrane (14.4%) cytosol (0%)" "glutamine synthetase activity (14.6%) ATP binding (13.7%) metal ion binding (13.6%)" "IPR008146 (13%) IPR014746 (13%) IPR036651 (12.7%)" "Glutamine synthetase, catalytic domain (13%) Glutamine synthetase/guanido kinase, catalytic domain (13%) Glutamine synthetase, N-terminal domain superfamily (12.7%)" VVCEVLSPLVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16.1%) GO:0003723 (0.6%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16.1%) RNA binding (0.6%)" "IPR001787 (33.3%) IPR028909 (33.3%) IPR036164 (33.3%)" "Large ribosomal subunit protein bL21 (33.3%) Large ribosomal subunit protein bL21-like (33.3%) Large ribosomal subunit protein bL21-like superfamily (33.3%)" TEEEGLAMIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0015977 (22.8%) GO:0009317 (22.8%) "GO:0003989 (22.8%) GO:0004658 (22.8%) GO:0016740 (8.9%)" carbon fixation (22.8%) acetyl-CoA carboxylase complex (22.8%) "acetyl-CoA carboxylase activity (22.8%) propionyl-CoA carboxylase activity (22.8%) transferase activity (8.9%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" GFSDIWASAENVSHWDIGLAGSALIEKPENR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016787 (100%) hydrolase activity (100%) "IPR001466 (20%) IPR005180 (20%) IPR012338 (20%)" "Beta-lactamase-related (20%) Domain of unknown function DUF302 (20%) Beta-lactamase/transpeptidase-like (20%)" KIIHPMGEIDAMEFLINK root "3.6.4.- (99.9%) 3.6.1.15 (0.1%)" "Acting on ATP; involved in cellular and subcellular movement (99.9%) nucleoside-triphosphate phosphatase (0.1%)" GO:0006353 (14.4%) "GO:0005829 (13.8%) GO:0016020 (0%)" "GO:0003723 (14.4%) GO:0005524 (14.4%) GO:0008186 (14.4%)" DNA-templated transcription termination (14.4%) "cytosol (13.8%) membrane (0%)" "RNA binding (14.4%) ATP binding (14.4%) ATP-dependent activity, acting on RNA (14.4%)" "IPR027417 (10.3%) IPR004665 (10.3%) IPR000194 (10.1%)" "P-loop containing nucleoside triphosphate hydrolase (10.3%) Transcription termination factor Rho (10.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%)" AVTDVVVTSTNAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.5.1.72 (100%) quinolinate synthase (100%) GO:0034628 (19.9%) GO:0005829 (19.9%) "GO:0008987 (19.9%) GO:0046872 (19.9%) GO:0051539 (19.9%)" 'de novo' NAD+ biosynthetic process from L-aspartate (19.9%) cytosol (19.9%) "quinolinate synthetase A activity (19.9%) metal ion binding (19.9%) 4 iron, 4 sulfur cluster binding (19.9%)" "IPR003473 (33.6%) IPR036094 (33.6%) IPR023066 (32.8%)" "Quinolinate synthetase A (33.6%) Quinolinate synthetase A superfamily (33.6%) Quinolinate synthase A, type 2 (32.8%)" WIANFPLSCEAWAEFRR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" LNTGLAENREGNTTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" NANAPEVNANLGLCELVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" AALESTLAAITESLKEGDAVQLVGFGTFK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0030261 (11.3%) GO:0006270 (10.9%) GO:0006351 (10.9%)" "GO:0005829 (11.3%) GO:1990103 (10.9%) GO:1990178 (10.9%)" "GO:0003677 (11.4%) GO:0030527 (11.3%) GO:0042802 (11%)" "chromosome condensation (11.3%) DNA replication initiation (10.9%) DNA-templated transcription (10.9%)" "cytosol (11.3%) DnaA-HU complex (10.9%) HU-DNA complex (10.9%)" "DNA binding (11.4%) structural constituent of chromatin (11.3%) identical protein binding (11%)" "IPR000119 (33.6%) IPR010992 (33.6%) IPR020816 (32.9%)" "Histone-like DNA-binding protein (33.6%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.6%) Histone-like DNA-binding protein, conserved site (32.9%)" EMDKYPEIKPNYVANYQDEKVWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.5%) IPR002880 (12.5%) IPR009014 (12.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" FTIAASFGNVHGVYKPGNVVLTPTILR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "4.1.2.13 (99.9%) 4.1.2.- (0.1%)" "fructose-bisphosphate aldolase (99.9%) Aldehyde-lyases (0.1%)" "GO:0006094 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004332 (20%) GO:0008270 (20%) GO:0016829 (0.1%)" "gluconeogenesis (20%) glycolytic process (20%)" cytosol (20%) "fructose-bisphosphate aldolase activity (20%) zinc ion binding (20%) lyase activity (0.1%)" "IPR000771 (33.3%) IPR006411 (33.3%) IPR013785 (33.3%)" "Fructose-bisphosphate aldolase, class-II (33.3%) Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype (33.3%) Aldolase-type TIM barrel (33.3%)" VTAERDPANLK root "1.2.1.- (88.1%) 1.2.1.12 (11.9%)" "With NAD(+) or NADP(+) as acceptor (88.1%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (11.9%)" "GO:0072524 (18.3%) GO:0006006 (17.6%) GO:0006096 (0.7%)" "GO:0005737 (0.6%) GO:0005576 (0%) GO:0005829 (0%)" "GO:0051287 (22.4%) GO:0050661 (17.6%) GO:0004365 (14.5%)" "pyridine-containing compound metabolic process (18.3%) glucose metabolic process (17.6%) glycolytic process (0.7%)" "cytoplasm (0.6%) extracellular region (0%) cytosol (0%)" "NAD binding (22.4%) NADP binding (17.6%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (14.5%)" "IPR020828 (17.4%) IPR020831 (17.4%) IPR036291 (17.4%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17.4%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.4%) NAD(P)-binding domain superfamily (17.4%)" WEGFQDFLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.1 (60%) 1.2.1.51 (20%) 1.2.7.- (20%)" "pyruvate synthase (60%) pyruvate dehydrogenase (NADP(+)) (20%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (11.3%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (11.3%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" MSGAVTYPNSVTYTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015159 (100%) polysaccharide transmembrane transporter activity (100%) "IPR003715 (33.3%) IPR019554 (33.3%) IPR049712 (33.3%)" "Polysaccharide export protein, N-terminal domain (33.3%) Soluble ligand binding domain (33.3%) Polysaccharide export protein (33.3%)" AELADELYDKILNIVVVQKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0003700 (50%) GO:0043565 (50%)" "DNA-binding transcription factor activity (50%) sequence-specific DNA binding (50%)" "IPR018060 (51.6%) IPR009057 (48.4%)" "AraC-like, DNA binding HTH domain (51.6%) Homedomain-like superfamily (48.4%)" VKDPSSNQNVNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015159 (100%) polysaccharide transmembrane transporter activity (100%) "IPR003715 (33.3%) IPR019554 (33.3%) IPR049712 (33.3%)" "Polysaccharide export protein, N-terminal domain (33.3%) Soluble ligand binding domain (33.3%) Polysaccharide export protein (33.3%)" VDAGGGVDKFGKPIYLNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (25%) IPR006665 (25%) IPR036737 (25%)" "Outer membrane protein, bacterial (25%) OmpA-like domain (25%) OmpA-like domain superfamily (25%)" GSLVGESNYQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (31.9%) "GO:0004476 (34%) GO:0008270 (34%)" carbohydrate metabolic process (31.9%) "mannose-6-phosphate isomerase activity (34%) zinc ion binding (34%)" "IPR011051 (17.2%) IPR014710 (17.2%) IPR046457 (17.2%)" "RmlC-like cupin domain superfamily (17.2%) RmlC-like jelly roll fold (17.2%) Phosphomannose isomerase type I, catalytic domain (17.2%)" MYTELTTDHPIDLCR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (49%) "GO:0004332 (49%) GO:0016829 (2%)" glycolytic process (49%) "fructose-bisphosphate aldolase activity (49%) lyase activity (2%)" "IPR002915 (25.3%) IPR013785 (25.3%) IPR050456 (25.3%)" "DeoC/FbaB/LacD aldolase (25.3%) Aldolase-type TIM barrel (25.3%) DeoC/FbaB aldolase (25.3%)" IQLTDAIAELAKK root 2.7.7.9 (100%) UTP--glucose-1-phosphate uridylyltransferase (100%) "GO:0006011 (21.8%) GO:0009103 (18.5%) GO:0045227 (0%)" GO:0005829 (19.1%) "GO:0003983 (21.8%) GO:0030234 (18.5%) GO:0016779 (0.2%)" "UDP-alpha-D-glucose metabolic process (21.8%) lipopolysaccharide biosynthetic process (18.5%) capsule polysaccharide biosynthetic process (0%)" cytosol (19.1%) "UTP:glucose-1-phosphate uridylyltransferase activity (21.8%) enzyme regulator activity (18.5%) nucleotidyltransferase activity (0.2%)" "IPR005771 (26.1%) IPR029044 (26%) IPR005835 (25.8%)" "UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type (26.1%) Nucleotide-diphospho-sugar transferases (26%) Nucleotidyl transferase domain (25.8%)" NDNAGGNRDKNFKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (20%) GO:0022627 (20%) "GO:0003729 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) cytosolic small ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001351 (11.3%) IPR004044 (11.3%) IPR004087 (11.3%)" "Small ribosomal subunit protein uS3, C-terminal (11.3%) K Homology domain, type 2 (11.3%) K Homology domain (11.3%)" HKAEYTPHVDTGDYIIVINADK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.8%) GO:0017148 (19.8%) GO:0002181 (0%)" "GO:0022625 (19.8%) GO:0005840 (0.6%) GO:0005737 (0.1%)" "GO:0003735 (19.9%) GO:0003729 (19.8%) GO:0008270 (0%)" "translation (19.8%) negative regulation of translation (19.8%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (19.8%) ribosome (0.6%) cytoplasm (0.1%)" "structural constituent of ribosome (19.9%) mRNA binding (19.8%) zinc ion binding (0%)" "IPR005822 (25%) IPR005823 (25%) IPR036899 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13 superfamily (25%)" INDLGFISTPYRK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (18.2%) GO:0006508 (4.5%)" GO:0000428 (18.2%) "GO:0003677 (18.2%) GO:0003899 (18.2%) GO:0032549 (18.2%)" "DNA-templated transcription (18.2%) proteolysis (4.5%)" DNA-directed RNA polymerase complex (18.2%) "DNA binding (18.2%) DNA-directed RNA polymerase activity (18.2%) ribonucleoside binding (18.2%)" "IPR007120 (7.6%) IPR007121 (7.6%) IPR007641 (7.6%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.6%) RNA polymerase, beta subunit, conserved site (7.6%) RNA polymerase Rpb2, domain 7 (7.6%)" MTTIDKLTADGTYSNLSKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (32.7%) "GO:0022627 (32.7%) GO:0005840 (1.9%)" GO:0003735 (32.7%) translation (32.7%) "cytosolic small ribosomal subunit (32.7%) ribosome (1.9%)" structural constituent of ribosome (32.7%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" KAESGELFVTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.4%)" "GO:0003735 (24.9%) GO:0019843 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.4%)" "structural constituent of ribosome (24.9%) rRNA binding (24.9%)" "IPR001063 (25.2%) IPR047867 (25.2%) IPR005727 (24.8%)" "Large ribosomal subunit protein uL22 (25.2%) Large ribosomal subunit protein uL22, bacteria/organella (25.2%) Large ribosomal subunit protein uL22, bacterial/chloroplast-type (24.8%)" LADEVDESAKEAEK root "GO:0006457 (0.1%) GO:0006974 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (18.9%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0005524 (20%) GO:0016887 (20%) GO:0051082 (20%)" "protein folding (0.1%) DNA damage response (0.1%) response to heat (0.1%)" "cytoplasm (18.9%) cytosol (0.1%) plasma membrane (0.1%)" "ATP binding (20%) ATP hydrolysis activity (20%) unfolded protein binding (20%)" "IPR001404 (15.1%) IPR037196 (15.1%) IPR020568 (14.8%)" "Heat shock protein Hsp90 family (15.1%) HSP90, C-terminal domain (15.1%) Ribosomal protein uS5 domain 2-type superfamily (14.8%)" SDLSELSLSDLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" HAVITSVDRDDLPDLGASHWVNTIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.8.1.8 (100%) lipoyl synthase (100%) GO:0009249 (17.9%) GO:0005737 (20.5%) "GO:0016992 (20.5%) GO:0046872 (20.5%) GO:0051539 (20.5%)" protein lipoylation (17.9%) cytoplasm (20.5%) "lipoate synthase activity (20.5%) metal ion binding (20.5%) 4 iron, 4 sulfur cluster binding (20.5%)" "IPR003698 (25%) IPR006638 (25%) IPR007197 (25%)" "Lipoyl synthase (25%) Elp3/MiaA/NifB-like, radical SAM core domain (25%) Radical SAM (25%)" AAIAADKNMAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" AIDDHTLEVTLSEPVPYFYK root "GO:0015833 (21%) GO:0015031 (18.1%) GO:0006857 (0.1%)" "GO:0030288 (20.8%) GO:0043190 (18.5%) GO:0005886 (0.1%)" "GO:1904680 (21%) GO:1900750 (0.1%)" "peptide transport (21%) protein transport (18.1%) oligopeptide transport (0.1%)" "outer membrane-bounded periplasmic space (20.8%) ATP-binding cassette (ABC) transporter complex (18.5%) plasma membrane (0.1%)" "peptide transmembrane transporter activity (21%) oligopeptide binding (0.1%)" "IPR000914 (26.1%) IPR039424 (25.9%) IPR023765 (24.6%)" "Solute-binding protein family 5 domain (26.1%) Solute-binding protein family 5 (25.9%) Solute-binding protein family 5, conserved site (24.6%)" NLTAEDVDYAGIWNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) VILAGEVTTPVTVR Bacteria Bacteria "GO:0006412 (24.7%) GO:0002181 (0.1%)" "GO:0022625 (24.6%) GO:0005840 (0.8%) GO:1990904 (0.3%)" "GO:0003735 (24.8%) GO:0019843 (24.6%)" "translation (24.7%) cytoplasmic translation (0.1%)" "cytosolic large ribosomal subunit (24.6%) ribosome (0.8%) ribonucleoprotein complex (0.3%)" "structural constituent of ribosome (24.8%) rRNA binding (24.6%)" "IPR021131 (20.2%) IPR036227 (20.2%) IPR001196 (20.1%)" "Large ribosomal subunit protein uL15/eL18 (20.2%) Large ribosomal subunit protein uL15/eL18 superfamily (20.2%) Large ribosomal subunit protein uL15, conserved site (20.1%)" KGGIAAFIDAEHAFDRFYAEK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006281 (12.7%) GO:0006310 (12.7%) GO:0009432 (12%)" GO:0005829 (12.7%) "GO:0003697 (12.7%) GO:0005524 (12.7%) GO:0140664 (12.7%)" "DNA repair (12.7%) DNA recombination (12.7%) SOS response (12%)" cytosol (12.7%) "single-stranded DNA binding (12.7%) ATP binding (12.7%) ATP-dependent DNA damage sensor activity (12.7%)" "IPR013765 (11.4%) IPR020587 (11.4%) IPR020588 (11.4%)" "DNA recombination and repair protein RecA (11.4%) DNA recombination and repair protein RecA, monomer-monomer interface (11.4%) DNA recombination and repair protein RecA-like, ATP-binding domain (11.4%)" ELPELTAEFIKR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.6%) GO:0051301 (12.4%) GO:0043335 (11.4%)" "GO:0005737 (12.3%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0003755 (12.7%) GO:0043022 (11.4%) GO:0044183 (11.4%)" "protein transport (12.6%) cell division (12.4%) protein unfolding (11.4%)" "cytoplasm (12.3%) cytosol (0.1%) membrane (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (12.7%) ribosome binding (11.4%) protein folding chaperone (11.4%)" "IPR037041 (13%) IPR001179 (12.8%) IPR046357 (12.7%)" "Trigger factor, C-terminal domain superfamily (13%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (12.8%) Peptidyl-prolyl cis-trans isomerase domain superfamily (12.7%)" LGFKEGEVLEHNMLSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (0.6%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (0.6%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" MVDEYTEVIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (62.1%) "GO:0016853 (34.5%) GO:0003755 (3.4%)" plasma membrane (62.1%) "isomerase activity (34.5%) peptidyl-prolyl cis-trans isomerase activity (3.4%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" SFTQDDAHIFCRPDQVKEEFLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004829 (16.7%) GO:0005524 (16.7%)" threonyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) threonine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002314 (7.9%) IPR002320 (7.9%) IPR006195 (7.9%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.9%) Threonine-tRNA ligase, class IIa (7.9%) Aminoacyl-tRNA synthetase, class II (7.9%)" NNNELVAVYGNFVNR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0004825 (16.7%) GO:0005524 (16.7%) GO:0000049 (16.5%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "methionine-tRNA ligase activity (16.7%) ATP binding (16.7%) tRNA binding (16.5%)" "IPR015413 (8.4%) IPR023458 (8.4%) IPR014729 (8.4%)" "Methionyl/Leucyl tRNA synthetase (8.4%) Methionine-tRNA ligase, type 1 (8.4%) Rossmann-like alpha/beta/alpha sandwich fold (8.4%)" MVLSTLTAISPVDGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (21.6%) GO:0044208 (21.6%) GO:0006188 (10.8%)" "GO:0004018 (32.4%) GO:0070626 (13.5%)" "'de novo' IMP biosynthetic process (21.6%) 'de novo' AMP biosynthetic process (21.6%) IMP biosynthetic process (10.8%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (32.4%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (13.5%)" "IPR000362 (12.5%) IPR004769 (12.5%) IPR008948 (12.5%)" "Fumarate lyase family (12.5%) Adenylosuccinate lyase (12.5%) L-Aspartase-like (12.5%)" INAANPTPEKPFVLGCPTGSSPLGMYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.4%) GO:0006043 (14.4%) GO:0006046 (14.4%)" "GO:0005829 (12.6%) GO:0005737 (0.9%)" "GO:0004342 (14.4%) GO:0042802 (14.4%)" "carbohydrate metabolic process (14.4%) glucosamine catabolic process (14.4%) N-acetylglucosamine catabolic process (14.4%)" "cytosol (12.6%) cytoplasm (0.9%)" "glucosamine-6-phosphate deaminase activity (14.4%) identical protein binding (14.4%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" EIMEAEDQNAMRQEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0015977 (23.2%) GO:0009317 (23.2%) "GO:0003989 (23.2%) GO:0004658 (23.2%) GO:0016740 (6.1%)" carbon fixation (23.2%) acetyl-CoA carboxylase complex (23.2%) "acetyl-CoA carboxylase activity (23.2%) propionyl-CoA carboxylase activity (23.2%) transferase activity (6.1%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" GYDSAGLAVVDAEGHMTR root 2.6.1.16 (100%) glutamine--fructose-6-phosphate transaminase (isomerizing) (100%) "GO:0006002 (12.7%) GO:0006487 (12.7%) GO:0006047 (12.7%)" GO:0005829 (12.7%) "GO:0004360 (12.7%) GO:0097367 (12.3%) GO:0008483 (0.2%)" "fructose 6-phosphate metabolic process (12.7%) protein N-linked glycosylation (12.7%) UDP-N-acetylglucosamine metabolic process (12.7%)" cytosol (12.7%) "glutamine-fructose-6-phosphate transaminase (isomerizing) activity (12.7%) carbohydrate derivative binding (12.3%) transaminase activity (0.2%)" "IPR017932 (12.8%) IPR029055 (12.8%) IPR047084 (12.6%)" "Glutamine amidotransferase type 2 domain (12.8%) Nucleophile aminohydrolases, N-terminal (12.8%) Glucosamine-fructose-6-phosphate aminotransferase, isomerising, N-terminal domain (12.6%)" AAEGNNFGTVLIPEGLIEFVPAMKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" VIEKTDEYLLCEVQNEATLGNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (16.7%) "GO:0000287 (16.7%) GO:0004743 (16.7%) GO:0005524 (16.7%)" response to stress (16.7%) "magnesium ion binding (16.7%) pyruvate kinase activity (16.7%) ATP binding (16.7%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" TVLFAALTGSLENHPDGFNFK Pseudomonadati Bacteria Pseudomonadati GO:0061077 (1%) "GO:0042597 (96.1%) GO:0030288 (1%)" "GO:0042803 (1%) GO:0060241 (1%)" obsolete chaperone-mediated protein folding (1%) "periplasmic space (96.1%) outer membrane-bounded periplasmic space (1%)" "protein homodimerization activity (1%) lysozyme inhibitor activity (1%)" "IPR036501 (51.2%) IPR014453 (48.8%)" "Inhibitor of vertebrate lysozyme superfamily (51.2%) Inhibitor of vertebrate lysozyme (48.8%)" YLPDYPNLDELKAHYTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (25%) GO:0005829 (25%) "GO:0004830 (25%) GO:0005524 (25%)" tryptophanyl-tRNA aminoacylation (25%) cytosol (25%) "tryptophan-tRNA ligase activity (25%) ATP binding (25%)" "IPR001412 (20%) IPR002305 (20%) IPR002306 (20%)" "Aminoacyl-tRNA synthetase, class I, conserved site (20%) Aminoacyl-tRNA synthetase, class Ic (20%) Tryptophan-tRNA ligase (20%)" WLEWDESSKVGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" IEQTLHTMGVPVFAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016787 (100%) hydrolase activity (100%) "IPR001466 (20%) IPR005180 (20%) IPR012338 (20%)" "Beta-lactamase-related (20%) Domain of unknown function DUF302 (20%) Beta-lactamase/transpeptidase-like (20%)" EASEGELKGVLGYTEDAVVSTDFR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.1.- (92.3%) 1.2.1.12 (7.7%)" "With NAD(+) or NADP(+) as acceptor (92.3%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (7.7%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (11.1%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (11.1%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" EIEPLLGAGLIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.5.1.108 (50%) 4.2.1.59 (50%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase (50%) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (50%)" "GO:0006633 (14.3%) GO:0009245 (14.3%)" "GO:0005737 (14.3%) GO:0016020 (14.3%)" "GO:0046872 (14.3%) GO:0103117 (14.3%) GO:0019171 (12.4%)" "fatty acid biosynthetic process (14.3%) lipid A biosynthetic process (14.3%)" "cytoplasm (14.3%) membrane (14.3%)" "metal ion binding (14.3%) UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.3%) (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (12.4%)" "IPR004463 (14.3%) IPR010084 (14.3%) IPR011334 (14.3%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.3%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (14.3%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.3%)" YSDAELEEFR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006355 (0.6%) GO:0008270 (99.4%) regulation of DNA-templated transcription (0.6%) zinc ion binding (99.4%) "IPR000962 (53.7%) IPR037187 (46.3%)" "Zinc finger, DksA/TraR C4-type (53.7%) DksA, N-terminal domain superfamily (46.3%)" YIDECGAANFFGIK root 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (18.9%) GO:0009098 (18.9%) GO:0009099 (18.9%)" "GO:0004084 (17.6%) GO:0052654 (5.7%) GO:0052655 (5.7%)" "isoleucine biosynthetic process (18.9%) L-leucine biosynthetic process (18.9%) L-valine biosynthetic process (18.9%)" "branched-chain-amino-acid transaminase activity (17.6%) L-leucine-2-oxoglutarate transaminase activity (5.7%) L-valine-2-oxoglutarate transaminase activity (5.7%)" "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" EFTDDVEAIKGAVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (16.7%) IPR014729 (16.7%) IPR017926 (16.7%)" "GMP synthase, C-terminal (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Glutamine amidotransferase (16.7%)" YRVEDVATPEGFAANPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.3.1.286 (100%) protein acetyllysine N-acetyltransferase (100%) GO:0005737 (20%) "GO:0017136 (20%) GO:0036054 (20%) GO:0036055 (20%)" cytoplasm (20%) "histone deacetylase activity, NAD-dependent (20%) protein-malonyllysine demalonylase activity (20%) protein-succinyllysine desuccinylase activity (20%)" "IPR003000 (16.7%) IPR026590 (16.7%) IPR026591 (16.7%)" "Sirtuin family (16.7%) Sirtuin family, catalytic core domain (16.7%) Sirtuin, catalytic core small domain superfamily (16.7%)" NASAAKHETVDMPYSK Bacillati Bacteria Bacillati GO:0006412 (16.8%) "GO:0005840 (17.1%) GO:1990904 (16.8%) GO:0005737 (15.9%)" "GO:0003735 (16.8%) GO:0019843 (16.5%)" translation (16.8%) "ribosome (17.1%) ribonucleoprotein complex (16.8%) cytoplasm (15.9%)" "structural constituent of ribosome (16.8%) rRNA binding (16.5%)" "IPR000630 (50%) IPR035987 (50%)" "Small ribosomal subunit protein uS8 (50%) Small ribosomal subunit protein uS8 superfamily (50%)" IVTPFVEDYDFLHFTPPMSAPDFVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.8.2.3 (100%) sulfide-cytochrome-c reductase (flavocytochrome c) (100%) GO:0070221 (30%) "GO:0070224 (30%) GO:0071949 (30%) GO:0070225 (10%)" sulfide oxidation, using sulfide:quinone oxidoreductase (30%) "sulfide:quinone oxidoreductase activity (30%) FAD binding (30%) sulfide dehydrogenase activity (10%)" "IPR015904 (25.7%) IPR023753 (25.7%) IPR036188 (25.7%)" "Sulphide quinone-reductase (25.7%) FAD/NAD(P)-binding domain (25.7%) FAD/NAD(P)-binding domain superfamily (25.7%)" TAPGEEGVVDRFMSGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" IQVTGSPAVLQSPQVQAK Bacteria Bacteria GO:0009408 (0.1%) "GO:0005737 (50%) GO:0005886 (50%)" response to heat (0.1%) "cytoplasm (50%) plasma membrane (50%)" "IPR007451 (50%) IPR035932 (50%)" "High frequency lysogenization protein HflD (50%) HflD-like superfamily (50%)" TTKREEAPAIQNQAASTTLGDIDALAALKEQLENK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" ALESIEGDFSPLYDSLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" AGTPLSDGATTPADILAIK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) GO:0000428 (16.9%) "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (15.7%)" DNA-templated transcription (16.9%) DNA-directed RNA polymerase complex (16.9%) "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (15.7%)" "IPR007081 (9.2%) IPR007083 (9.2%) IPR038120 (9.2%)" "RNA polymerase Rpb1, domain 5 (9.2%) RNA polymerase Rpb1, domain 4 (9.2%) RNA polymerase Rpb1, funnel domain superfamily (9.2%)" KVAEITWEQVR Pseudomonadati Bacteria Pseudomonadati GO:0006412 (25%) "GO:0022625 (24.7%) GO:0005840 (0.6%)" "GO:0003735 (25%) GO:0070180 (24.7%)" translation (25%) "cytosolic large ribosomal subunit (24.7%) ribosome (0.6%)" "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (24.7%)" "IPR020783 (15%) IPR036769 (15%) IPR000911 (14.9%)" "Large ribosomal subunit protein uL11, C-terminal (15%) Large ribosomal subunit protein uL11, C-terminal domain superfamily (15%) Ribosomal protein uL11 (14.9%)" GRHDPCVLPR root "4.2.3.5 (99.9%) 1.5.1.38 (0.1%)" "chorismate synthase (99.9%) FMN reductase (NADPH) (0.1%)" "GO:0008652 (16.6%) GO:0009073 (16.6%) GO:0009423 (16.6%)" "GO:0005829 (16.6%) GO:0005681 (0.1%) GO:0009536 (0.1%)" "GO:0004107 (16.6%) GO:0010181 (16.6%) GO:0042602 (0.2%)" "amino acid biosynthetic process (16.6%) aromatic amino acid family biosynthetic process (16.6%) chorismate biosynthetic process (16.6%)" "cytosol (16.6%) spliceosomal complex (0.1%) plastid (0.1%)" "chorismate synthase activity (16.6%) FMN binding (16.6%) riboflavin reductase (NADPH) activity (0.2%)" "IPR000453 (33%) IPR020541 (32.9%) IPR035904 (32.8%)" "Chorismate synthase (33%) Chorismate synthase, conserved site (32.9%) Chorismate synthase AroC superfamily (32.8%)" LGIKLDKDQLIAGVQDAFADK root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (34.2%) GO:0042026 (0.1%)" "GO:0030313 (26.8%) GO:0042597 (4.1%) GO:0030288 (0.1%)" "GO:0003755 (34.1%) GO:0016853 (0.6%) GO:0044183 (0.1%)" "protein folding (34.2%) protein refolding (0.1%)" "cell envelope (26.8%) periplasmic space (4.1%) outer membrane-bounded periplasmic space (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (34.1%) isomerase activity (0.6%) protein folding chaperone (0.1%)" "IPR000774 (25.2%) IPR036944 (25.2%) IPR046357 (24.8%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25.2%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25.2%) Peptidyl-prolyl cis-trans isomerase domain superfamily (24.8%)" IVGAPLPDMPWEDRPEGSKEVLWR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0016757 (62.5%) GO:0016798 (25%) GO:0016787 (12.5%)" "glycosyltransferase activity (62.5%) hydrolase activity, acting on glycosyl bonds (25%) hydrolase activity (12.5%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" SVEVILDACCGAIAEGLEER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (32.7%) "GO:0022627 (32.7%) GO:0005840 (1.8%)" GO:0003735 (32.7%) translation (32.7%) "cytosolic small ribosomal subunit (32.7%) ribosome (1.8%)" structural constituent of ribosome (32.7%) "IPR001865 (25.3%) IPR005706 (25.3%) IPR023591 (25.3%)" "Small ribosomal subunit protein uS2 (25.3%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.3%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.3%)" IVFLDTPGHEAFTAMR root GO:0006413 (0.1%) "GO:0005829 (24.7%) GO:0005737 (0.2%) GO:0009536 (0.1%)" "GO:0003743 (24.9%) GO:0003924 (24.9%) GO:0005525 (24.9%)" translational initiation (0.1%) "cytosol (24.7%) cytoplasm (0.2%) plastid (0.1%)" "translation initiation factor activity (24.9%) GTPase activity (24.9%) GTP binding (24.9%)" "IPR000795 (9%) IPR005225 (9%) IPR015760 (9%)" "Translational (tr)-type GTP-binding domain (9%) Small GTP-binding domain (9%) Translation initiation factor IF- 2 (9%)" DSFLASLTEAEREMR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006950 (0.1%) GO:0042594 (0.1%) GO:0045893 (0.1%)" "GO:0005737 (98.5%) GO:0005829 (0.1%)" "GO:0016740 (0.5%) GO:0004364 (0.3%) GO:0016853 (0.1%)" "response to stress (0.1%) response to starvation (0.1%) positive regulation of DNA-templated transcription (0.1%)" "cytoplasm (98.5%) cytosol (0.1%)" "transferase activity (0.5%) glutathione transferase activity (0.3%) isomerase activity (0.1%)" "IPR004046 (11.2%) IPR036282 (11.2%) IPR034342 (11.2%)" "Glutathione S-transferase, C-terminal (11.2%) Glutathione S-transferase, C-terminal domain superfamily (11.2%) Stringent starvation protein A, C-terminal (11.2%)" EKGVNLVLAVDAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" ADNHLSNEMIFPVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" FEFRPLEPGFGITVGNALRR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.8%) GO:0005737 (16.6%)" "GO:0003899 (16.7%) GO:0046983 (16.7%) GO:0003677 (16.5%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.6%)" "DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%) DNA binding (16.5%)" "IPR011262 (16.8%) IPR011263 (16.8%) IPR036603 (16.7%)" "DNA-directed RNA polymerase, insert domain (16.8%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) RNA polymerase, RBP11-like subunit (16.7%)" RSEALGYLNQIVSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" GHTVYIQHTAGINSGFSDEEYEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.1.1 (100%) alanine dehydrogenase (100%) GO:0042853 (25.6%) GO:0005886 (25.6%) "GO:0000286 (25.6%) GO:0000166 (23.3%)" L-alanine catabolic process (25.6%) plasma membrane (25.6%) "alanine dehydrogenase activity (25.6%) nucleotide binding (23.3%)" "IPR007698 (20%) IPR007886 (20%) IPR008141 (20%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (20%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (20%) Alanine dehydrogenase (20%)" REEEMPIGYCFSYPTESIPGGDAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0001678 (12.7%) GO:0006006 (12.7%) GO:0006096 (12.7%)" GO:0005829 (11%) "GO:0004340 (12.7%) GO:0005524 (12.7%) GO:0005536 (12.7%)" "intracellular glucose homeostasis (12.7%) glucose metabolic process (12.7%) glycolytic process (12.7%)" cytosol (11%) "glucokinase activity (12.7%) ATP binding (12.7%) D-glucose binding (12.7%)" "IPR001312 (25%) IPR022672 (25%) IPR022673 (25%)" "Hexokinase (25%) Hexokinase, N-terminal (25%) Hexokinase, C-terminal (25%)" FDFVRIEDDKAIYANHWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (9.9%) GO:0008564 (1.2%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (9.9%) protein-exporting ATPase activity (1.2%)" "IPR000185 (8.3%) IPR011115 (8.3%) IPR014018 (8.3%)" "Protein translocase subunit SecA (8.3%) SecA DEAD-like, N-terminal (8.3%) SecA motor DEAD (8.3%)" IGVLTSGGDAPGMNAAIR root "2.7.1.11 (99.7%) 1.17.7.4 (0.3%) 2.7.1.- (0%)" "6-phosphofructokinase (99.7%) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (0.3%) Phosphotransferases with an alcohol group as acceptor (0%)" "GO:0006002 (8.8%) GO:0030388 (8.8%) GO:0061621 (8.8%)" "GO:0005945 (8.8%) GO:0005737 (0%) GO:0005829 (0%)" "GO:0003872 (8.8%) GO:0046872 (8.8%) GO:0005524 (8.8%)" "fructose 6-phosphate metabolic process (8.8%) fructose 1,6-bisphosphate metabolic process (8.8%) canonical glycolysis (8.8%)" "6-phosphofructokinase complex (8.8%) cytoplasm (0%) cytosol (0%)" "6-phosphofructokinase activity (8.8%) metal ion binding (8.8%) ATP binding (8.8%)" "IPR000023 (17.1%) IPR035966 (17.1%) IPR022953 (17%)" "Phosphofructokinase domain (17.1%) Phosphofructokinase superfamily (17.1%) ATP-dependent 6-phosphofructokinase (17%)" HITIGLDCASSEFYHDGIYDYTKFEGPKGEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.9%) IPR020809 (16.9%) IPR020810 (16.9%)" "Enolase (16.9%) Enolase, conserved site (16.9%) Enolase, C-terminal TIM barrel domain (16.9%)" YKGTLYEVIYQLTGGLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" YLTPPSVDVKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0022627 (25%) GO:0005840 (0.2%)" "GO:0003735 (25%) GO:0070181 (25%)" translation (25%) "cytosolic small ribosomal subunit (25%) ribosome (0.2%)" "structural constituent of ribosome (25%) small ribosomal subunit rRNA binding (25%)" "IPR001648 (33.3%) IPR018275 (33.3%) IPR036870 (33.3%)" "Small ribosomal subunit protein bS18 (33.3%) Small ribosomal subunit protein bS18, conserved site (33.3%) Small ribosomal subunit protein bS18 superfamily (33.3%)" ITLNLNEPCKIEDTSWIKPVK Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.2.1.- (33.3%) 3.2.1.22 (33.3%) 3.2.1.3 (33.3%)" "Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (33.3%) alpha-galactosidase (33.3%) glucan 1,4-alpha-glucosidase (33.3%)" "GO:0030246 (64.4%) GO:0016787 (32.2%) GO:0004339 (1.7%)" "carbohydrate binding (64.4%) hydrolase activity (32.2%) glucan 1,4-alpha-glucosidase activity (1.7%)" "IPR013785 (14%) IPR014718 (14%) IPR017853 (14%)" "Aldolase-type TIM barrel (14%) Glycoside hydrolase-type carbohydrate-binding (14%) Glycoside hydrolase superfamily (14%)" EIELTDAYQNTGAQLVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.4%) GO:0005737 (15.7%) "GO:0005524 (17.4%) GO:0140662 (17.4%) GO:0016853 (16.5%)" protein refolding (17.4%) cytoplasm (15.7%) "ATP binding (17.4%) ATP-dependent protein folding chaperone (17.4%) isomerase activity (16.5%)" "IPR001844 (16.9%) IPR002423 (16.9%) IPR027410 (16.9%)" "Chaperonin Cpn60/GroEL (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%) TCP-1-like chaperonin intermediate domain superfamily (16.9%)" FNPALEEEGKNPFMLDSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.1 (60%) 1.2.1.51 (20%) 1.2.7.- (20%)" "pyruvate synthase (60%) pyruvate dehydrogenase (NADP(+)) (20%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (11.4%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (11.4%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" SLGNSPDPLELIDKYGADGVR root 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (20.1%) GO:0005829 (20.1%) "GO:0004832 (20.1%) GO:0005524 (20.1%) GO:0002161 (19.6%)" valyl-tRNA aminoacylation (20.1%) cytosol (20.1%) "valine-tRNA ligase activity (20.1%) ATP binding (20.1%) aminoacyl-tRNA deacylase activity (19.6%)" "IPR002300 (9.2%) IPR002303 (9.2%) IPR009080 (9.2%)" "Aminoacyl-tRNA synthetase, class Ia (9.2%) Valine-tRNA ligase (9.2%) Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (9.2%)" LQNPTNDAVAAK Bacteria Bacteria "4.4.1.11 (50.7%) 2.5.1.49 (38.4%) 2.5.1.48 (4.1%)" "methionine gamma-lyase (50.7%) O-acetylhomoserine aminocarboxypropyltransferase (38.4%) cystathionine gamma-synthase (4.1%)" "GO:0019346 (13.8%) GO:0071269 (13.8%) GO:0006535 (13.8%)" GO:0005737 (13.8%) "GO:0004124 (13.8%) GO:0030170 (13.8%) GO:0003961 (13.8%)" "transsulfuration (13.8%) L-homocysteine biosynthetic process (13.8%) cysteine biosynthetic process from serine (13.8%)" cytoplasm (13.8%) "cysteine synthase activity (13.8%) pyridoxal phosphate binding (13.8%) O-acetylhomoserine aminocarboxypropyltransferase activity (13.8%)" "IPR000277 (19.6%) IPR006235 (19.6%) IPR015421 (19.6%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (19.6%) O-acetylhomoserine/O-acetylserine sulfhydrylase (19.6%) Pyridoxal phosphate-dependent transferase, major domain (19.6%)" LGVNSEQIPVNKPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" GO:0005737 (16.7%) "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16.7%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" cytoplasm (16.7%) "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16.7%)" "IPR002226 (12.6%) IPR010582 (12.6%) IPR011614 (12.6%)" "Catalase haem-binding site (12.6%) Catalase immune-responsive domain (12.6%) Catalase core domain (12.6%)" AAPAPAAAAPK root "2.7.1.191 (59.7%) 2.3.1.12 (22.1%) 2.3.1.61 (9.7%)" "protein-N(pi)-phosphohistidine--D-mannose phosphotransferase (59.7%) dihydrolipoyllysine-residue acetyltransferase (22.1%) dihydrolipoyllysine-residue succinyltransferase (9.7%)" "GO:0009401 (11.5%) GO:0006086 (3.3%) GO:0006412 (2.7%)" "GO:0005737 (12.3%) GO:0005886 (12.2%) GO:0045254 (3.3%)" "GO:0016301 (11.5%) GO:0008982 (10.9%) GO:0004742 (3.4%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (11.5%) pyruvate decarboxylation to acetyl-CoA (3.3%) translation (2.7%)" "cytoplasm (12.3%) plasma membrane (12.2%) pyruvate dehydrogenase complex (3.3%)" "kinase activity (11.5%) protein-N(PI)-phosphohistidine-sugar phosphotransferase activity (10.9%) dihydrolipoyllysine-residue acetyltransferase activity (3.4%)" "IPR004701 (6.4%) IPR033887 (6.4%) IPR036662 (6.4%)" "Phosphotransferase system, mannose-type IIA component (6.4%) PTS system mannose/sorbose specific IIA subunit (6.4%) Phosphotransferase system, mannose-type IIA component superfamily (6.4%)" ISHTEPGNVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GSDRPVAPSEYSHAMGNSSGNLWDQWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.7%) IPR006101 (7.7%) IPR006102 (7.7%)" "Beta galactosidase small chain/ domain 5 (7.7%) Glycoside hydrolase, family 2 (7.7%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.7%)" DMMDLCADTGNVYETVAIIGKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006351 (25.5%) GO:0000428 (23.6%) "GO:0003677 (25.5%) GO:0003899 (25.5%)" DNA-templated transcription (25.5%) DNA-directed RNA polymerase complex (23.6%) "DNA binding (25.5%) DNA-directed RNA polymerase activity (25.5%)" IPR006110 (100%) RNA polymerase, subunit omega/Rpo6/RPB6 (100%) GLIDAPFTPFHENGEVNYEPIEAYAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.3.3 (100%) N-acetylneuraminate lyase (100%) GO:0005737 (50%) "GO:0016829 (30%) GO:0008747 (20%)" cytoplasm (50%) "lyase activity (30%) N-acetylneuraminate lyase activity (20%)" "IPR002220 (50%) IPR013785 (50%)" "DapA-like (50%) Aldolase-type TIM barrel (50%)" ALIEAELEQQKK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.3%) "GO:0022627 (22.8%) GO:0005840 (1.7%) GO:1990904 (1.5%)" "GO:0003729 (24.3%) GO:0003735 (24.3%) GO:0004654 (0.2%)" translation (24.3%) "cytosolic small ribosomal subunit (22.8%) ribosome (1.7%) ribonucleoprotein complex (1.5%)" "mRNA binding (24.3%) structural constituent of ribosome (24.3%) polyribonucleotide nucleotidyltransferase activity (0.2%)" "IPR003029 (24.9%) IPR012340 (24.9%) IPR035104 (24.9%)" "S1 domain (24.9%) Nucleic acid-binding, OB-fold (24.9%) Ribosomal protein S1-like (24.9%)" HKGASVTEVLVNCVIFNDGIHK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.-.- (33.3%) 1.2.7.11 (33.3%) 1.2.7.3 (33.3%)" "Acting on the aldehyde or oxo group of donors (33.3%) 2-oxoacid oxidoreductase (ferredoxin) (33.3%) 2-oxoglutarate synthase (33.3%)" GO:0044281 (33.3%) "GO:0016625 (33.3%) GO:0030976 (33.3%)" small molecule metabolic process (33.3%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (33.3%) thiamine pyrophosphate binding (33.3%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" EQVILNTWYGGEMKK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.6%) GO:0005829 (17.6%) "GO:0004612 (17.6%) GO:0005524 (17.6%) GO:0046872 (17.3%)" gluconeogenesis (17.6%) cytosol (17.6%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.6%) ATP binding (17.6%) metal ion binding (17.3%)" "IPR001272 (25.2%) IPR008210 (25.2%) IPR013035 (24.9%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.2%) Phosphoenolpyruvate carboxykinase, N-terminal (25.2%) Phosphoenolpyruvate carboxykinase, C-terminal (24.9%)" MIGQGMHGFVGNDHTKFENLDEELANPTDLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "6.3.5.5 (94.1%) 6.3.4.16 (5.9%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (94.1%) carbamoyl-phosphate synthase (ammonia) (5.9%)" "GO:0006221 (13.4%) GO:0006526 (13.4%) GO:0006541 (13.4%)" GO:0005737 (13.4%) "GO:0004088 (13.4%) GO:0005524 (13.4%) GO:0046872 (13.4%)" "pyrimidine nucleotide biosynthetic process (13.4%) L-arginine biosynthetic process (13.4%) glutamine metabolic process (13.4%)" cytoplasm (13.4%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.4%) ATP binding (13.4%) metal ion binding (13.4%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" MLAVAVEACKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "6.3.4.14 (71.4%) 6.4.1.7 (21.4%) 6.4.1.2 (7.1%)" "biotin carboxylase (71.4%) 2-oxoglutarate carboxylase (21.4%) acetyl-CoA carboxylase (7.1%)" GO:2001295 (18.5%) "GO:0005524 (21.5%) GO:0046872 (21.5%) GO:0003989 (16.9%)" malonyl-CoA biosynthetic process (18.5%) "ATP binding (21.5%) metal ion binding (21.5%) acetyl-CoA carboxylase activity (16.9%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" GLVGEIINRFER Pseudomonadati Bacteria Pseudomonadati 2.7.4.6 (100%) nucleoside-diphosphate kinase (100%) "GO:0006183 (16%) GO:0006228 (16%) GO:0006241 (16%)" GO:0005737 (2.5%) "GO:0004550 (16%) GO:0005524 (16%) GO:0046872 (16%)" "GTP biosynthetic process (16%) UTP biosynthetic process (16%) CTP biosynthetic process (16%)" cytoplasm (2.5%) "nucleoside diphosphate kinase activity (16%) ATP binding (16%) metal ion binding (16%)" "IPR034907 (28%) IPR036850 (28%) IPR001564 (26%)" "Nucleoside diphosphate kinase-like domain (28%) Nucleoside diphosphate kinase-like domain superfamily (28%) Nucleoside diphosphate kinase (26%)" MESLNLIKNDPWLAPYEAAIEGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) GO:0005737 (20%) "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (20%)" glycogen biosynthetic process (20%) cytoplasm (20%) "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (20%)" "IPR004193 (12.5%) IPR006047 (12.5%) IPR006048 (12.5%)" "Glycoside hydrolase, family 13, N-terminal (12.5%) Glycosyl hydrolase family 13, catalytic domain (12.5%) Alpha-amylase/branching enzyme, C-terminal all beta (12.5%)" RMEAEAGACEDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (48.5%) GO:0004601 (24.2%) GO:0016491 (22.7%)" "iron ion binding (48.5%) peroxidase activity (24.2%) oxidoreductase activity (22.7%)" "IPR003251 (12.7%) IPR009078 (12.7%) IPR012347 (12.7%)" "Rubrerythrin, diiron-binding domain (12.7%) Ferritin-like superfamily (12.7%) Ferritin-like (12.7%)" KDEPTQSSDPGSQPNSEEQAGGEER root 3.4.21.92 (100%) endopeptidase Clp (100%) "GO:0034605 (14.5%) GO:0006508 (14.2%) GO:0043335 (12.6%)" "GO:0005737 (14.5%) GO:0005829 (0.1%) GO:0009368 (0.1%)" "GO:0005524 (15.1%) GO:0016887 (14.5%) GO:0008233 (12.2%)" "cellular response to heat (14.5%) proteolysis (14.2%) protein unfolding (12.6%)" "cytoplasm (14.5%) cytosol (0.1%) endopeptidase Clp complex (0.1%)" "ATP binding (15.1%) ATP hydrolysis activity (14.5%) peptidase activity (12.2%)" "IPR004176 (9.1%) IPR036628 (9.1%) IPR027417 (8.8%)" "Clp, repeat (R) N-terminal domain (9.1%) Clp, N-terminal domain superfamily (9.1%) P-loop containing nucleoside triphosphate hydrolase (8.8%)" MKVPGLNISQFNQVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.-.- (50%) 1.2.7.3 (50%)" "Acting on the aldehyde or oxo group of donors (50%) 2-oxoglutarate synthase (50%)" GO:0006979 (50%) "GO:0016903 (48.1%) GO:0047553 (1.9%)" response to oxidative stress (50%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors (48.1%) 2-oxoglutarate synthase activity (1.9%)" "IPR002869 (12.5%) IPR002880 (12.5%) IPR009014 (12.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" TAVTHVPSAFNSQSTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0034599 (33.3%) GO:0005737 (33.3%) GO:0016491 (33.3%) cellular response to oxidative stress (33.3%) cytoplasm (33.3%) oxidoreductase activity (33.3%) "IPR000415 (33.3%) IPR029479 (33.3%) IPR033877 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase Frm2/Hbn1-like (33.3%)" SVIATEVSQELASEDIQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.1%) GO:0006164 (1.1%)" GO:0005737 (20.2%) "GO:0004642 (20.2%) GO:0005524 (20.2%) GO:0046872 (19.1%)" "'de novo' IMP biosynthetic process (19.1%) purine nucleotide biosynthetic process (1.1%)" cytoplasm (20.2%) "phosphoribosylformylglycinamidine synthase activity (20.2%) ATP binding (20.2%) metal ion binding (19.1%)" "IPR036604 (11.5%) IPR036921 (11.5%) IPR040707 (11.5%)" "Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily (11.5%) PurM-like, N-terminal domain superfamily (11.5%) Phosphoribosylformylglycinamidine synthase, N-terminal (11.5%)" LQPNGEEGGYKVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) GADGGFLLTDR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0009055 (100%) electron transfer activity (100%) "IPR000049 (20%) IPR012255 (20%) IPR014729 (20%)" "Electron transfer flavoprotein, beta-subunit, conserved site (20%) Electron transfer flavoprotein, beta subunit (20%) Rossmann-like alpha/beta/alpha sandwich fold (20%)" GNLLELAVEAAHVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20.2%) GO:0005737 (20.2%) "GO:0004494 (20.2%) GO:0031419 (20.2%) GO:0046872 (18.7%)" propionate metabolic process, methylmalonyl pathway (20.2%) cytoplasm (20.2%) "methylmalonyl-CoA mutase activity (20.2%) cobalamin binding (20.2%) metal ion binding (18.7%)" "IPR006099 (18%) IPR016176 (18%) IPR006098 (16.7%)" "Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (18%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (18%) Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%)" KKFDLTIGDELPTGIVQMAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (17.6%) GO:0006508 (5.9%)" GO:0000428 (17.6%) "GO:0003677 (17.6%) GO:0003899 (17.6%) GO:0032549 (17.6%)" "DNA-templated transcription (17.6%) proteolysis (5.9%)" DNA-directed RNA polymerase complex (17.6%) "DNA binding (17.6%) DNA-directed RNA polymerase activity (17.6%) ribonucleoside binding (17.6%)" "IPR007120 (7.5%) IPR007121 (7.5%) IPR007641 (7.5%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.5%) RNA polymerase, beta subunit, conserved site (7.5%) RNA polymerase Rpb2, domain 7 (7.5%)" DLFESIERGDFPK Bacteria Bacteria 1.11.1.6 (100%) catalase (100%) "GO:0042542 (15.9%) GO:0042744 (15.9%)" "GO:0005737 (15.9%) GO:0042597 (4.8%)" "GO:0004096 (15.9%) GO:0020037 (15.9%) GO:0046872 (15.9%)" "response to hydrogen peroxide (15.9%) hydrogen peroxide catabolic process (15.9%)" "cytoplasm (15.9%) periplasmic space (4.8%)" "catalase activity (15.9%) heme binding (15.9%) metal ion binding (15.9%)" "IPR010582 (13.2%) IPR011614 (13.2%) IPR018028 (13.2%)" "Catalase immune-responsive domain (13.2%) Catalase core domain (13.2%) Catalase, mono-functional, haem-containing (13.2%)" VEHGVLFIDIPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006457 (16.7%) GO:0009408 (16.7%) GO:0009651 (16.7%)" GO:0051082 (16.7%) "protein folding (16.7%) response to heat (16.7%) response to salt stress (16.7%)" unfolded protein binding (16.7%) "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" VNPVIPEVMNQIDYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.8%) GO:0006531 (24.8%)" GO:0005829 (24.8%) "GO:0008797 (24.8%) GO:0016853 (1%)" "tricarboxylic acid cycle (24.8%) aspartate metabolic process (24.8%)" cytosol (24.8%) "aspartate ammonia-lyase activity (24.8%) isomerase activity (1%)" "IPR000362 (12.6%) IPR008948 (12.6%) IPR018951 (12.6%)" "Fumarate lyase family (12.6%) L-Aspartase-like (12.6%) Fumarase C, C-terminal (12.6%)" VMELMEACDTWIPLPPR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (19.4%) GO:0032045 (1.9%)" "GO:0003746 (19.4%) GO:0003924 (19.4%) GO:0005525 (19.4%)" "cytosol (19.4%) guanyl-nucleotide exchange factor complex (1.9%)" "translation elongation factor activity (19.4%) GTPase activity (19.4%) GTP binding (19.4%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" VAAEKANESQPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.3%) GO:0005829 (14.3%) "GO:0003723 (14.3%) GO:0004386 (14.3%) GO:0005524 (14.3%)" DNA-templated transcription termination (14.3%) cytosol (14.3%) "RNA binding (14.3%) helicase activity (14.3%) ATP binding (14.3%)" "IPR000194 (10%) IPR003593 (10%) IPR004665 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) Transcription termination factor Rho (10%)" LLHLPERTDIPENIKEQLIVELYSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" FFDKLLYEVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.83 (100%) LL-diaminopimelate aminotransferase (100%) GO:0033362 (33.3%) "GO:0010285 (33.3%) GO:0030170 (33.3%)" lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway (33.3%) "L,L-diaminopimelate aminotransferase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004839 (20%) IPR015421 (20%) IPR015422 (20%)" "Aminotransferase, class I/classII, large domain (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" GYDVIEDGKQGIIR Bacillota Bacteria Bacillati Bacillota GO:0006412 (16.7%) "GO:0005840 (16.7%) GO:1990904 (16.7%) GO:0005737 (16.3%)" "GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "ribosome (16.7%) ribonucleoprotein complex (16.7%) cytoplasm (16.3%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR000630 (35%) IPR035987 (35%) IPR047863 (30.1%)" "Small ribosomal subunit protein uS8 (35%) Small ribosomal subunit protein uS8 superfamily (35%) Small ribosomal subunit protein uS8, conserved site (30.1%)" VMLGLPVEKPNKNEFDLDYVGIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (13.9%) GO:0006526 (13.9%) GO:0006541 (13.9%)" GO:0005737 (13.9%) "GO:0004088 (13.9%) GO:0005524 (13.9%) GO:0046872 (13.9%)" "pyrimidine nucleotide biosynthetic process (13.9%) L-arginine biosynthetic process (13.9%) glutamine metabolic process (13.9%)" cytoplasm (13.9%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.9%) ATP binding (13.9%) metal ion binding (13.9%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" GMVDEGLAQINK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) VGIVSVHLYRPFSAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "1.2.7.1 (73.3%) 1.2.7.- (20%) 1.2.1.51 (6.7%)" "pyruvate synthase (73.3%) With an iron-sulfur protein as acceptor (20%) pyruvate dehydrogenase (NADP(+)) (6.7%)" "GO:0006979 (14.6%) GO:0022900 (14.6%) GO:0044281 (12.3%)" "GO:0005506 (14.6%) GO:0051539 (14.6%) GO:0030976 (14.2%)" "response to oxidative stress (14.6%) electron transport chain (14.6%) small molecule metabolic process (12.3%)" "iron ion binding (14.6%) 4 iron, 4 sulfur cluster binding (14.6%) thiamine pyrophosphate binding (14.2%)" "IPR002869 (7.7%) IPR009014 (7.7%) IPR011895 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%) Pyruvate-flavodoxin oxidoreductase (7.7%)" MKESFLKK Bacteria Bacteria 2.1.1.61 (100%) tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase (100%) "GO:0006879 (18.9%) GO:0009103 (1.1%)" "GO:0005829 (18.9%) GO:0005886 (1.1%) GO:0016020 (1.1%)" "GO:0004322 (18.9%) GO:0008199 (18.9%) GO:0020037 (18.9%)" "intracellular iron ion homeostasis (18.9%) lipopolysaccharide biosynthetic process (1.1%)" "cytosol (18.9%) plasma membrane (1.1%) membrane (1.1%)" "ferroxidase activity (18.9%) ferric iron binding (18.9%) heme binding (18.9%)" "IPR008331 (16.7%) IPR009078 (16.7%) IPR012347 (16.7%)" "Ferritin/DPS domain (16.7%) Ferritin-like superfamily (16.7%) Ferritin-like (16.7%)" IEISNTSHPFYTGK Bacteria Bacteria GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR002150 (25.1%) IPR027493 (25.1%) IPR034704 (24.9%)" "Large ribosomal subunit protein bL31 type A/B (25.1%) Large ribosomal subunit protein bL31 type B (25.1%) Large ribosomal subunit protein bL28/bL31-like superfamily (24.9%)" AHVIAGAGHWVHAEKPDAVLR root "3.1.-.- (97.1%) 3.1.1.116 (2.9%)" "Acting on ester bonds (97.1%) sn-1-specific diacylglycerol lipase (2.9%)" GO:0005829 (0.4%) "GO:0016787 (95.9%) GO:0016746 (2.9%) GO:0016790 (0.4%)" cytosol (0.4%) "hydrolase activity (95.9%) acyltransferase activity (2.9%) thiolester hydrolase activity (0.4%)" "IPR000073 (50%) IPR029058 (50%)" "Alpha/beta hydrolase fold-1 (50%) Alpha/Beta hydrolase fold (50%)" NDLKEVTPEQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (33.3%) GO:0005829 (33.3%) GO:0003677 (33.3%) regulation of DNA-templated transcription (33.3%) cytosol (33.3%) DNA binding (33.3%) "IPR002876 (16.9%) IPR026564 (16.9%) IPR029072 (16.9%)" "Transcriptional regulator TACO1-like (16.9%) Transcriptional regulator TACO1-like, domain 3 (16.9%) YebC-like (16.9%)" QMAEGAQVTEISAAEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (33.3%) "GO:0046872 (33.3%) GO:0070006 (33.3%)" cytoplasm (33.3%) "metal ion binding (33.3%) metalloaminopeptidase activity (33.3%)" "IPR000587 (14.3%) IPR000994 (14.3%) IPR029149 (14.3%)" "Creatinase, N-terminal (14.3%) Peptidase M24 (14.3%) Creatinase/Aminopeptidase P/Spt16, N-terminal (14.3%)" ILQAATPIATSEPDKYNAEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" AVQWVGGGVAFAPKPR Clostridia Bacteria Bacillati Bacillota Clostridia GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" QQQIETLQAELASK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IFTEDGVSIPVTVIEVEANR root "GO:0006412 (24.8%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (24.8%) GO:0005840 (0.6%) GO:0005737 (0%)" "GO:0003735 (24.8%) GO:0019843 (24.8%)" "translation (24.8%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.8%) ribosome (0.6%) cytoplasm (0%)" "structural constituent of ribosome (24.8%) rRNA binding (24.8%)" "IPR009000 (25.1%) IPR019927 (25.1%) IPR000597 (24.7%)" "Translation protein, beta-barrel domain superfamily (25.1%) Large ribosomal subunit protein uL3, bacteria/organella (25.1%) Large ribosomal subunit protein uL3 (24.7%)" QSQEEMGHAYAMADYIIKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.4%) GO:0006879 (14.4%)" "GO:0005829 (14.4%) GO:0005737 (0.5%)" "GO:0004322 (14.4%) GO:0008198 (14.4%) GO:0008199 (14.4%)" "iron ion transport (14.4%) intracellular iron ion homeostasis (14.4%)" "cytosol (14.4%) cytoplasm (0.5%)" "ferroxidase activity (14.4%) ferrous iron binding (14.4%) ferric iron binding (14.4%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" MLTQIINGHILTPQGWMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (33.3%) "GO:0008448 (33.3%) GO:0046872 (33.3%)" N-acetylglucosamine catabolic process (33.3%) "N-acetylglucosamine-6-phosphate deacetylase activity (33.3%) metal ion binding (33.3%)" "IPR003764 (25%) IPR006680 (25%) IPR011059 (25%)" "N-acetylglucosamine-6-phosphate deacetylase (25%) Amidohydrolase-related (25%) Metal-dependent hydrolase, composite domain superfamily (25%)" AFNEMQPIVDR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0005829 (19.8%) GO:0015935 (19.8%) GO:0005840 (0.6%)" "GO:0003735 (19.9%) GO:0070181 (19.8%) GO:0019843 (0.1%)" "translation (19.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosol (19.8%) small ribosomal subunit (19.8%) ribosome (0.6%)" "structural constituent of ribosome (19.9%) small ribosomal subunit rRNA binding (19.8%) rRNA binding (0.1%)" "IPR002583 (50%) IPR036510 (50%)" "Small ribosomal subunit protein bS20 (50%) Small ribosomal subunit protein bS20 superfamily (50%)" KFDHILMAMETSITK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (34.5%) "GO:0016615 (30.9%) GO:0016616 (30.9%) GO:0030060 (3.6%)" malate metabolic process (34.5%) "malate dehydrogenase activity (30.9%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (30.9%) L-malate dehydrogenase (NAD+) activity (3.6%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" FQQATGQLENTAR Bacteria Bacteria GO:0006412 (33.1%) "GO:0022625 (33.1%) GO:0005840 (0.6%)" GO:0003735 (33.1%) translation (33.1%) "cytosolic large ribosomal subunit (33.1%) ribosome (0.6%)" structural constituent of ribosome (33.1%) "IPR001854 (25.9%) IPR050063 (25.9%) IPR036049 (25.8%)" "Large ribosomal subunit protein uL29 (25.9%) Universal ribosomal protein uL29 (25.9%) Large ribosomal subunit protein uL29 superfamily (25.8%)" AIANIENLMNSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" KDIENAAILYDEIDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" SIGVCNFQIHHLQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.1.1.274 (89.3%) 1.1.1.- (7.1%) 1.1.1.2 (1.8%)" "2,5-didehydrogluconate reductase (2-dehydro-D-gluconate-forming) (89.3%) With NAD(+) or NADP(+) as acceptor (7.1%) alcohol dehydrogenase (NADP(+)) (1.8%)" "GO:0019853 (49.3%) GO:0051596 (0.2%) GO:0034220 (0.1%)" "GO:0005737 (0.2%) GO:0005829 (0.2%)" "GO:0016616 (35.1%) GO:0050580 (14.1%) GO:0016491 (0.4%)" "L-ascorbic acid biosynthetic process (49.3%) methylglyoxal catabolic process (0.2%) monoatomic ion transmembrane transport (0.1%)" "cytoplasm (0.2%) cytosol (0.2%)" "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (35.1%) 2,5-didehydrogluconate reductase activity (14.1%) oxidoreductase activity (0.4%)" "IPR018170 (23.8%) IPR020471 (23.8%) IPR023210 (23.8%)" "Aldo/keto reductase, conserved site (23.8%) Aldo-keto reductase (23.8%) NADP-dependent oxidoreductase domain (23.8%)" QNIVNLPAGTDYSQAAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.2.1.1 (94.7%) 2.2.1.- (5.3%)" "transketolase (94.7%) Transketolases and transaldolases (5.3%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" VNVAIIEACEVTPDGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (24.9%) GO:0006084 (24.9%)" "GO:0003986 (24.9%) GO:0008775 (24.9%) GO:0016740 (0.3%)" "acetate metabolic process (24.9%) acetyl-CoA metabolic process (24.9%)" "acetyl-CoA hydrolase activity (24.9%) acetate CoA-transferase activity (24.9%) transferase activity (0.3%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" EKGYEFTDEDPQKNYPDQLDEYRK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.1.3.1 (100%) methylmalonyl-CoA carboxytransferase (100%) GO:0006094 (2.9%) GO:0005737 (2.9%) "GO:0003824 (71.4%) GO:0047154 (20%) GO:0004736 (2.9%)" gluconeogenesis (2.9%) cytoplasm (2.9%) "catalytic activity (71.4%) methylmalonyl-CoA carboxytransferase activity (20%) pyruvate carboxylase activity (2.9%)" "IPR000891 (23.1%) IPR003379 (23.1%) IPR013785 (23.1%)" "Pyruvate carboxyltransferase (23.1%) Carboxylase, conserved domain (23.1%) Aldolase-type TIM barrel (23.1%)" LAEAINRDFGSFENFKK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.15.1.1 (100%) superoxide dismutase (100%) GO:0005737 (32.3%) "GO:0004784 (33.9%) GO:0046872 (33.9%)" cytoplasm (32.3%) "superoxide dismutase activity (33.9%) metal ion binding (33.9%)" "IPR001189 (16.8%) IPR019831 (16.8%) IPR019832 (16.8%)" "Manganese/iron superoxide dismutase (16.8%) Manganese/iron superoxide dismutase, N-terminal (16.8%) Manganese/iron superoxide dismutase, C-terminal (16.8%)" IGFEGGQMPLQR root GO:0006412 (25.2%) "GO:0022625 (25.2%) GO:0005840 (0%)" "GO:0003735 (25.2%) GO:0019843 (24.3%)" translation (25.2%) "cytosolic large ribosomal subunit (25.2%) ribosome (0%)" "structural constituent of ribosome (25.2%) rRNA binding (24.3%)" "IPR005749 (20.4%) IPR030878 (20.4%) IPR021131 (20.3%)" "Large ribosomal subunit protein uL15, bacteria (20.4%) Large ribosomal subunit protein uL15 (20.4%) Large ribosomal subunit protein uL15/eL18 (20.3%)" NYDGLQNDLDKMDGVFLKR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (22.8%) GO:0046034 (2.1%) GO:1902600 (0.2%)" "GO:0046961 (24.8%) GO:0005524 (24.3%) GO:0046933 (22.8%)" "proton motive force-driven plasma membrane ATP synthesis (22.8%) ATP metabolic process (2.1%) proton transmembrane transport (0.2%)" "proton-transporting ATPase activity, rotational mechanism (24.8%) ATP binding (24.3%) proton-transporting ATP synthase activity, rotational mechanism (22.8%)" "IPR022878 (13.1%) IPR027417 (13.1%) IPR004100 (12.9%)" "V-type ATP synthase catalytic alpha chain (13.1%) P-loop containing nucleoside triphosphate hydrolase (13.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (12.9%)" THDKAVAPTLAICPNCGEWHVYHTVCGACGYYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.3%) "GO:0015934 (32.9%) GO:0022625 (0.5%)" GO:0003735 (33.3%) translation (33.3%) "large ribosomal subunit (32.9%) cytosolic large ribosomal subunit (0.5%)" structural constituent of ribosome (33.3%) "IPR002677 (33.3%) IPR011332 (33.3%) IPR044957 (33.3%)" "Large ribosomal subunit protein bL32 (33.3%) Zinc-binding ribosomal protein (33.3%) Large ribosomal subunit protein bL32, bacteria (33.3%)" AFDVTFIDKNGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.1%) IPR004154 (11.1%) IPR004499 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Anticodon-binding (11.1%) Proline-tRNA ligase, class IIa, archaeal-type (11.1%)" HETISEDELR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.1.2.20 (100%) acyl-CoA hydrolase (100%) "GO:0006629 (32.9%) GO:0006355 (0.1%) GO:0032787 (0.1%)" "GO:0005737 (32.9%) GO:0005829 (0.1%)" "GO:0016289 (33.7%) GO:0016790 (0.2%) GO:0003677 (0.1%)" "lipid metabolic process (32.9%) regulation of DNA-templated transcription (0.1%) monocarboxylic acid metabolic process (0.1%)" "cytoplasm (32.9%) cytosol (0.1%)" "acyl-CoA hydrolase activity (33.7%) thiolester hydrolase activity (0.2%) DNA binding (0.1%)" "IPR029069 (33.5%) IPR006683 (33.3%) IPR003736 (33.1%)" "HotDog domain superfamily (33.5%) Thioesterase domain (33.3%) Phenylacetic acid degradation-related domain (33.1%)" GLISYVTPPGGGTTDYAVDIYYSAAKGEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" EIPMRPGQLFMDPKR root 4.1.1.15 (100%) glutamate decarboxylase (100%) "GO:0006538 (21.4%) GO:0051454 (14%)" "GO:0005829 (21.4%) GO:0016020 (0.1%)" "GO:0004351 (21.4%) GO:0030170 (21.4%) GO:0016829 (0.5%)" "L-glutamate catabolic process (21.4%) intracellular pH elevation (14%)" "cytosol (21.4%) membrane (0.1%)" "glutamate decarboxylase activity (21.4%) pyridoxal phosphate binding (21.4%) lyase activity (0.5%)" "IPR002129 (20.8%) IPR010107 (20.8%) IPR015421 (20.8%)" "Pyridoxal phosphate-dependent decarboxylase (20.8%) Glutamate decarboxylase (20.8%) Pyridoxal phosphate-dependent transferase, major domain (20.8%)" VGAATEVEMKEK root "5.6.1.7 (100%) 2.3.1.41 (0%)" "chaperonin ATPase (100%) beta-ketoacyl-[acyl-carrier-protein] synthase I (0%)" "GO:0042026 (17.3%) GO:0009408 (0.1%) GO:0051085 (0%)" "GO:0005737 (16.5%) GO:0009986 (0.1%) GO:0042603 (0.1%)" "GO:0140662 (17.3%) GO:0005524 (17.3%) GO:0016853 (16.9%)" "protein refolding (17.3%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (16.5%) cell surface (0.1%) capsule (0.1%)" "ATP-dependent protein folding chaperone (17.3%) ATP binding (17.3%) isomerase activity (16.9%)" "IPR001844 (16.8%) IPR027409 (16.8%) IPR002423 (16.7%)" "Chaperonin Cpn60/GroEL (16.8%) GroEL-like apical domain superfamily (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%)" AVAEKEIHTAGKPDHIELVADR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) "GO:0004553 (43.7%) GO:0004565 (6.3%)" carbohydrate metabolic process (50%) "hydrolase activity, hydrolyzing O-glycosyl compounds (43.7%) beta-galactosidase activity (6.3%)" "IPR006102 (7.7%) IPR006103 (7.7%) IPR006104 (7.7%)" "Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.7%) Glycoside hydrolase family 2, catalytic domain (7.7%) Glycosyl hydrolases family 2, sugar binding domain (7.7%)" NPIIVGSSGLTNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.3.1.1 (100%) dihydrouracil dehydrogenase (NAD(+)) (100%) "GO:0006210 (12%) GO:0006212 (12%) GO:0006222 (8%)" GO:0005737 (16%) "GO:0004152 (14%) GO:0002058 (12%) GO:0050661 (12%)" "thymine catabolic process (12%) uracil catabolic process (12%) UMP biosynthetic process (8%)" cytoplasm (16%) "dihydroorotate dehydrogenase activity (14%) uracil binding (12%) NADP binding (12%)" "IPR005720 (30.8%) IPR012135 (30.8%) IPR013785 (30.8%)" "Dihydroorotate dehydrogenase, catalytic (30.8%) Dihydroorotate dehydrogenase, class 1/ 2 (30.8%) Aldolase-type TIM barrel (30.8%)" QAVEEATVKAPLR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.2.1.32 (100%) L(+)-tartrate dehydratase (100%) "GO:0006099 (0.3%) GO:0044010 (0.3%) GO:1901275 (0.3%)" "GO:0005829 (0.3%) GO:1902494 (0.3%)" "GO:0046872 (32.5%) GO:0051539 (32.5%) GO:0016829 (16.7%)" "tricarboxylic acid cycle (0.3%) single-species biofilm formation (0.3%) tartrate metabolic process (0.3%)" "cytosol (0.3%) catalytic complex (0.3%)" "metal ion binding (32.5%) 4 iron, 4 sulfur cluster binding (32.5%) lyase activity (16.7%)" "IPR004646 (50%) IPR051208 (50%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (50%) Class-I Fumarase/Tartrate Dehydratase (50%)" TVTGEDVTQEQLGGASVHTTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0015977 (23.3%) GO:0009317 (23.3%) "GO:0003989 (23.3%) GO:0004658 (23.3%) GO:0016740 (6.8%)" carbon fixation (23.3%) acetyl-CoA carboxylase complex (23.3%) "acetyl-CoA carboxylase activity (23.3%) propionyl-CoA carboxylase activity (23.3%) transferase activity (6.8%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" SITGPAAFIETNIVGTYVLLEAAR root "4.2.1.46 (99.7%) 4.2.1.47 (0.3%)" "dTDP-glucose 4,6-dehydratase (99.7%) GDP-mannose 4,6-dehydratase (0.3%)" "GO:0009225 (38.1%) GO:1901137 (20.6%) GO:0000271 (0.4%)" GO:0005829 (0.1%) "GO:0008460 (38.7%) GO:0016829 (0.4%) GO:0042802 (0.1%)" "nucleotide-sugar metabolic process (38.1%) carbohydrate derivative biosynthetic process (20.6%) polysaccharide biosynthetic process (0.4%)" cytosol (0.1%) "dTDP-glucose 4,6-dehydratase activity (38.7%) lyase activity (0.4%) identical protein binding (0.1%)" "IPR016040 (33.6%) IPR036291 (33.6%) IPR005888 (32.8%)" "NAD(P)-binding domain (33.6%) NAD(P)-binding domain superfamily (33.6%) dTDP-glucose 4,6-dehydratase (32.8%)" DHQILAVAEYLAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" AIEEIGTYNPNTQPSTININSER Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (34.6%) IPR023803 (34.6%) IPR020592 (30.8%)" "Small ribosomal subunit protein bS16 (34.6%) Small ribosomal subunit protein bS16 domain superfamily (34.6%) Small ribosomal subunit protein bS16, conserved site (30.8%)" GCNLCVVACPSDVLELHPR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.7.3 (50%) 1.97.1.12 (50%)" "2-oxoglutarate synthase (50%) photosystem I (50%)" "GO:0046872 (48.6%) GO:0051539 (48.6%) GO:0016491 (2.9%)" "metal ion binding (48.6%) 4 iron, 4 sulfur cluster binding (48.6%) oxidoreductase activity (2.9%)" "IPR017896 (33.3%) IPR017900 (33.3%) IPR050572 (33.3%)" "4Fe-4S ferredoxin-type, iron-sulphur binding domain (33.3%) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (33.3%) Iron-Sulfur Ferredoxin (33.3%)" FSTGAGFQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0004866 (100%) endopeptidase inhibitor activity (100%) "IPR001599 (20%) IPR002890 (20%) IPR008930 (20%)" "Alpha-2-macroglobulin (20%) Macroglobulin domain (20%) Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid (20%)" ELQSVGIQPDVLVLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.8%) GO:0044210 (11.8%) GO:0006241 (0.2%)" "GO:0005829 (11.8%) GO:0097268 (11.6%)" "GO:0003883 (11.8%) GO:0005524 (11.8%) GO:0042802 (11.8%)" "pyrimidine nucleobase biosynthetic process (11.8%) 'de novo' CTP biosynthetic process (11.8%) CTP biosynthetic process (0.2%)" "cytosol (11.8%) cytoophidium (11.6%)" "CTP synthase activity (11.8%) ATP binding (11.8%) identical protein binding (11.8%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" IGINELMEAGFISSSQVVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR001196 (20%) IPR005749 (20%) IPR021131 (20%)" "Large ribosomal subunit protein uL15, conserved site (20%) Large ribosomal subunit protein uL15, bacteria (20%) Large ribosomal subunit protein uL15/eL18 (20%)" SKLADMDLSVR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.7%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.7%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011260 (16.7%) IPR011262 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.7%) DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" NVFENPVWYTSYTPYQTEVSQGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) "GO:0019464 (16.6%) GO:0009116 (0.1%)" "GO:0005829 (16.6%) GO:0005960 (16.6%)" "GO:0004375 (16.7%) GO:0016594 (16.6%) GO:0030170 (16.6%)" "glycine decarboxylation via glycine cleavage system (16.6%) nucleoside metabolic process (0.1%)" "cytosol (16.6%) glycine cleavage complex (16.6%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.6%) pyridoxal phosphate binding (16.6%)" "IPR015421 (14.3%) IPR015422 (14.3%) IPR015424 (14.3%)" "Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%) Pyridoxal phosphate-dependent transferase (14.3%)" GGTPYGATTIAGGDGSRQPSQEELSIAR Bacteria Bacteria 1.6.5.2 (100%) NAD(P)H dehydrogenase (quinone) (100%) GO:0006979 (0%) "GO:0016020 (16.4%) GO:0005829 (0%) GO:0032991 (0%)" "GO:0010181 (16.3%) GO:0050660 (15.7%) GO:0050661 (15.7%)" response to oxidative stress (0%) "membrane (16.4%) cytosol (0%) protein-containing complex (0%)" "FMN binding (16.3%) flavin adenine dinucleotide binding (15.7%) NADP binding (15.7%)" "IPR029039 (20.2%) IPR010089 (20.1%) IPR008254 (20.1%)" "Flavoprotein-like superfamily (20.2%) Flavoprotein WrbA-like (20.1%) Flavodoxin/nitric oxide synthase (20.1%)" MFINATGFYVPEER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) "GO:0006633 (31.3%) GO:0044550 (31.3%)" "GO:0004315 (31.3%) GO:0033818 (6.3%)" "fatty acid biosynthetic process (31.3%) secondary metabolite biosynthetic process (31.3%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (31.3%) beta-ketoacyl-acyl-carrier-protein synthase III activity (6.3%)" "IPR013747 (33.3%) IPR013751 (33.3%) IPR016039 (33.3%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (33.3%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (33.3%) Thiolase-like (33.3%)" MKFIVSSTALFSHLQAVSR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006271 (16.7%) "GO:0005737 (16.7%) GO:0009360 (16.7%)" "GO:0003677 (16.7%) GO:0003887 (16.7%) GO:0008408 (16.7%)" DNA strand elongation involved in DNA replication (16.7%) "cytoplasm (16.7%) DNA polymerase III complex (16.7%)" "DNA binding (16.7%) DNA-directed DNA polymerase activity (16.7%) 3'-5' exonuclease activity (16.7%)" "IPR001001 (20%) IPR022634 (20%) IPR022635 (20%)" "DNA polymerase III, beta sliding clamp (20%) DNA polymerase III, beta sliding clamp, N-terminal (20%) DNA polymerase III, beta sliding clamp, C-terminal (20%)" TCDTCKGSGVVTR Pseudomonadati Bacteria Pseudomonadati "GO:0006260 (12.9%) GO:0042026 (12.9%) GO:0009408 (11.3%)" GO:0005737 (12.9%) "GO:0008270 (12.9%) GO:0031072 (12.9%) GO:0051082 (12.9%)" "DNA replication (12.9%) protein refolding (12.9%) response to heat (11.3%)" cytoplasm (12.9%) "zinc ion binding (12.9%) heat shock protein binding (12.9%) unfolded protein binding (12.9%)" "IPR001305 (12.7%) IPR001623 (12.7%) IPR002939 (12.7%)" "Heat shock protein DnaJ, cysteine-rich domain (12.7%) DnaJ domain (12.7%) Chaperone DnaJ, C-terminal (12.7%)" SLVNNMVIGVSEGYKK Bacteria Bacteria GO:0002181 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" cytoplasmic translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000702 (20.2%) IPR019906 (20.2%) IPR020040 (20.2%)" "Large ribosomal subunit protein uL6-like (20.2%) Large ribosomal subunit protein uL6, bacteria (20.2%) Large ribosomal subunit protein uL6, alpha-beta domain (20.2%)" STENEEWREDSKSENTDAGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" ECAVVTHYR root 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%) GO:0016874 (0%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%) ligase activity (0%)" "IPR004499 (11.2%) IPR002314 (11.2%) IPR006195 (11.2%)" "Proline-tRNA ligase, class IIa, archaeal-type (11.2%) Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.2%) Aminoacyl-tRNA synthetase, class II (11.2%)" GTVAEEDRSIMNVCFVMNDEYKELEDEFSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" ALTESDGDIEKAMEIIRK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" SKGYEFTDEDPQVNYPDELDKYRK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "2.1.3.1 (66.7%) 6.4.1.1 (33.3%)" "methylmalonyl-CoA carboxytransferase (66.7%) pyruvate carboxylase (33.3%)" GO:0006094 (29.7%) GO:0005737 (29.7%) "GO:0004736 (29.7%) GO:0003824 (5.4%) GO:0047154 (5.4%)" gluconeogenesis (29.7%) cytoplasm (29.7%) "pyruvate carboxylase activity (29.7%) catalytic activity (5.4%) methylmalonyl-CoA carboxytransferase activity (5.4%)" "IPR000891 (25%) IPR003379 (25%) IPR013785 (25%)" "Pyruvate carboxyltransferase (25%) Carboxylase, conserved domain (25%) Aldolase-type TIM barrel (25%)" SGRLPGPLDPEIVALAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.1.3.1 (100%) methylmalonyl-CoA carboxytransferase (100%) GO:0006094 (4.8%) GO:0005737 (4.8%) "GO:0003824 (76.2%) GO:0047154 (9.5%) GO:0004736 (4.8%)" gluconeogenesis (4.8%) cytoplasm (4.8%) "catalytic activity (76.2%) methylmalonyl-CoA carboxytransferase activity (9.5%) pyruvate carboxylase activity (4.8%)" "IPR000891 (25%) IPR003379 (25%) IPR013785 (25%)" "Pyruvate carboxyltransferase (25%) Carboxylase, conserved domain (25%) Aldolase-type TIM barrel (25%)" VIASCGCTTPEWPKEPVAPGKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011467 (50%) IPR013783 (50%)" "Protein of unknown function DUF1573 (50%) Immunoglobulin-like fold (50%)" TIKEFPAGSYLWSQDGEIR root 6.3.5.4 (100%) asparagine synthase (glutamine-hydrolyzing) (100%) "GO:0006529 (24.8%) GO:0070981 (0.2%) GO:0006541 (0.1%)" "GO:0005829 (24.8%) GO:0005737 (0.1%)" "GO:0004066 (24.9%) GO:0005524 (24.1%) GO:0016874 (0.5%)" "obsolete asparagine biosynthetic process (24.8%) L-asparagine biosynthetic process (0.2%) glutamine metabolic process (0.1%)" "cytosol (24.8%) cytoplasm (0.1%)" "asparagine synthase (glutamine-hydrolyzing) activity (24.9%) ATP binding (24.1%) ligase activity (0.5%)" "IPR050795 (14.5%) IPR029055 (14.5%) IPR017932 (14.4%)" "Asparagine Synthetase (14.5%) Nucleophile aminohydrolases, N-terminal (14.5%) Glutamine amidotransferase type 2 domain (14.4%)" MKTNLSSQITLTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.8%) GO:0006044 (32.8%)" "GO:0004342 (32.8%) GO:0016853 (1.6%)" "carbohydrate metabolic process (32.8%) N-acetylglucosamine metabolic process (32.8%)" "glucosamine-6-phosphate deaminase activity (32.8%) isomerase activity (1.6%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" EFSYSKFEQALILPEDVVKEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" EFLETYNNVQLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) TVAKVDEAADALK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (32.7%) "GO:0022627 (32.7%) GO:0005840 (1.9%)" GO:0003735 (32.7%) translation (32.7%) "cytosolic small ribosomal subunit (32.7%) ribosome (1.9%)" structural constituent of ribosome (32.7%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" IVEESPSPFLTPELR Bacteroidota Bacteria Pseudomonadati Bacteroidota "6.3.4.14 (87.7%) 6.4.1.2 (11%) 6.4.1.7 (1.4%)" "biotin carboxylase (87.7%) acetyl-CoA carboxylase (11%) 2-oxoglutarate carboxylase (1.4%)" "GO:2001295 (14.4%) GO:0006633 (0.2%)" "GO:0005524 (23.9%) GO:0046872 (23.9%) GO:0003989 (15.1%)" "malonyl-CoA biosynthetic process (14.4%) fatty acid biosynthetic process (0.2%)" "ATP binding (23.9%) metal ion binding (23.9%) acetyl-CoA carboxylase activity (15.1%)" "IPR005479 (13%) IPR011761 (13%) IPR011764 (13%)" "Carbamoyl phosphate synthase, ATP-binding domain (13%) ATP-grasp fold (13%) Biotin carboxylation domain (13%)" NVHFMGLTSDGGVHSSLDHLFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20.2%) GO:0006096 (19.1%)" GO:0005829 (20.2%) "GO:0004619 (20.2%) GO:0030145 (20.2%)" "glucose catabolic process (20.2%) glycolytic process (19.1%)" cytosol (20.2%) "phosphoglycerate mutase activity (20.2%) manganese ion binding (20.2%)" "IPR005995 (20.2%) IPR006124 (20.2%) IPR011258 (20.2%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.2%) Metalloenzyme (20.2%) BPG-independent PGAM, N-terminal (20.2%)" SEKAPFMVFSGTNSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" LQVEHPITEEVVGVDLVKEQIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.3.4.14 (87.5%) 6.4.1.7 (9.4%) 6.4.1.2 (3.1%)" "biotin carboxylase (87.5%) 2-oxoglutarate carboxylase (9.4%) acetyl-CoA carboxylase (3.1%)" GO:2001295 (17.8%) "GO:0005524 (21.7%) GO:0046872 (21.7%) GO:0004075 (17.8%)" malonyl-CoA biosynthetic process (17.8%) "ATP binding (21.7%) metal ion binding (21.7%) biotin carboxylase activity (17.8%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" IKADMVDQMDYDKILSMYQDR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.24.55 (100%) pitrilysin (100%) GO:0006508 (33.3%) "GO:0004222 (33.3%) GO:0046872 (33.3%)" proteolysis (33.3%) "metalloendopeptidase activity (33.3%) metal ion binding (33.3%)" "IPR001431 (20%) IPR007863 (20%) IPR011249 (20%)" "Peptidase M16, zinc-binding site (20%) Peptidase M16, C-terminal (20%) Metalloenzyme, LuxS/M16 peptidase-like (20%)" SLLTSTLHSYFEGRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005524 (100%) ATP binding (100%) "IPR012547 (33.3%) IPR018631 (33.3%) IPR027417 (33.3%)" "PD-(D/E)XK nuclease superfamily 9 (33.3%) AAA-ATPase-like domain (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" VIGAFDKITASTPEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0002181 (20%) GO:0015934 (20%) "GO:0003735 (20%) GO:0016740 (20%) GO:0019843 (19.3%)" cytoplasmic translation (20%) large ribosomal subunit (20%) "structural constituent of ribosome (20%) transferase activity (20%) rRNA binding (19.3%)" "IPR002171 (11.1%) IPR005880 (11.1%) IPR008991 (11.1%)" "Large ribosomal subunit protein uL2 (11.1%) Large ribosomal subunit protein uL2, bacteria/organella (11.1%) Translation protein SH3-like domain superfamily (11.1%)" GFSGEDATPALEGADVVLISAGVAR Bacteria Bacteria 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006099 (25%) GO:0006108 (24.5%) GO:0006096 (0%)" "GO:0005737 (25%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0030060 (25%) GO:0016491 (0.1%) GO:0016615 (0%)" "tricarboxylic acid cycle (25%) malate metabolic process (24.5%) glycolytic process (0%)" "cytoplasm (25%) cytosol (0%) membrane (0%)" "L-malate dehydrogenase (NAD+) activity (25%) oxidoreductase activity (0.1%) malate dehydrogenase activity (0%)" "IPR001236 (13.5%) IPR036291 (13.5%) IPR001252 (13.2%)" "Lactate/malate dehydrogenase, N-terminal (13.5%) NAD(P)-binding domain superfamily (13.5%) Malate dehydrogenase, active site (13.2%)" YHVEKPEELAVLNYTSGTTSFSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.2.1.3 (100%) long-chain-fatty-acid--CoA ligase (100%) GO:0016020 (43.8%) "GO:0004467 (50%) GO:0016405 (6.3%)" membrane (43.8%) "long-chain fatty acid-CoA ligase activity (50%) CoA-ligase activity (6.3%)" "IPR000873 (33.3%) IPR020845 (33.3%) IPR042099 (33.3%)" "AMP-dependent synthetase/ligase domain (33.3%) AMP-binding, conserved site (33.3%) ANL, N-terminal domain (33.3%)" SKLTPEQYAVTQK Bacteria Bacteria "1.8.4.12 (51.5%) 1.8.4.11 (48.5%)" "peptide-methionine (R)-S-oxide reductase (51.5%) peptide-methionine (S)-S-oxide reductase (48.5%)" "GO:0006979 (18.1%) GO:0030091 (18.1%)" GO:0005737 (18.1%) "GO:0033743 (18.1%) GO:0008113 (17%) GO:0033744 (10.6%)" "response to oxidative stress (18.1%) protein repair (18.1%)" cytoplasm (18.1%) "peptide-methionine (R)-S-oxide reductase activity (18.1%) peptide-methionine (S)-S-oxide reductase activity (17%) L-methionine (S)-S-oxide reductase activity (10.6%)" "IPR002579 (20.5%) IPR011057 (20.5%) IPR028427 (20.5%)" "Peptide methionine sulphoxide reductase MrsB domain (20.5%) Mss4-like superfamily (20.5%) Peptide methionine sulfoxide reductase MsrB (20.5%)" ILRETMPEKPLLFTFR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.2.1.10 (100%) 3-dehydroquinate dehydratase (100%) "GO:0046279 (20.6%) GO:0008652 (20.2%) GO:0009073 (19%)" GO:0005829 (0.2%) "GO:0003855 (20.6%) GO:0016829 (0.3%) GO:0042803 (0.2%)" "3,4-dihydroxybenzoate biosynthetic process (20.6%) amino acid biosynthetic process (20.2%) aromatic amino acid family biosynthetic process (19%)" cytosol (0.2%) "3-dehydroquinate dehydratase activity (20.6%) lyase activity (0.3%) protein homodimerization activity (0.2%)" "IPR001381 (25.1%) IPR013785 (25.1%) IPR050146 (25.1%)" "3-dehydroquinate dehydratase type I (25.1%) Aldolase-type TIM barrel (25.1%) Type-I 3-dehydroquinase (25.1%)" TEMWYVIDNAGGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (32.3%) "GO:0004476 (33.8%) GO:0008270 (33.8%)" carbohydrate metabolic process (32.3%) "mannose-6-phosphate isomerase activity (33.8%) zinc ion binding (33.8%)" "IPR011051 (17.1%) IPR014710 (17.1%) IPR046457 (17.1%)" "RmlC-like cupin domain superfamily (17.1%) RmlC-like jelly roll fold (17.1%) Phosphomannose isomerase type I, catalytic domain (17.1%)" LAFDEGIFINPVIPPACAPQDTLVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.3.1.50 (54.5%) 2.3.1.47 (45.5%)" "serine C-palmitoyltransferase (54.5%) 8-amino-7-oxononanoate synthase (45.5%)" "GO:0030170 (45.2%) GO:0008483 (25%) GO:0016740 (14.3%)" "pyridoxal phosphate binding (45.2%) transaminase activity (25%) transferase activity (14.3%)" "IPR015422 (17.2%) IPR015424 (17.2%) IPR004839 (16.7%)" "Pyridoxal phosphate-dependent transferase, small domain (17.2%) Pyridoxal phosphate-dependent transferase (17.2%) Aminotransferase, class I/classII, large domain (16.7%)" MNNYETVFILTPVLSDAQMKEAVEKFTNLLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.8%) "GO:0005737 (16.8%) GO:0005840 (16.8%) GO:1990904 (15.9%)" "GO:0003735 (16.8%) GO:0070181 (16.8%)" translation (16.8%) "cytoplasm (16.8%) ribosome (16.8%) ribonucleoprotein complex (15.9%)" "structural constituent of ribosome (16.8%) small ribosomal subunit rRNA binding (16.8%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" LVDKVIGITNEEAISTAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.5.1.47 (99.2%) 4.5.1.5 (0.8%)" "cysteine synthase (99.2%) S-carboxymethylcysteine synthase (0.8%)" "GO:0006535 (35.1%) GO:0006534 (0.3%) GO:0008652 (0.3%)" "GO:0005737 (0.3%) GO:0005829 (0.3%) GO:0009333 (0.3%)" "GO:0004124 (36.3%) GO:0016829 (22.2%) GO:0016740 (1.5%)" "cysteine biosynthetic process from serine (35.1%) cysteine metabolic process (0.3%) amino acid biosynthetic process (0.3%)" "cytoplasm (0.3%) cytosol (0.3%) cysteine synthase complex (0.3%)" "cysteine synthase activity (36.3%) lyase activity (22.2%) transferase activity (1.5%)" "IPR001926 (17.1%) IPR036052 (17.1%) IPR050214 (17.1%)" "Tryptophan synthase beta chain-like, PALP domain (17.1%) Tryptophan synthase beta chain-like, PALP domain superfamily (17.1%) Cysteine synthase/Cystathionine beta-synthase (17.1%)" KGANHQCAPIPEEGKWVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides KSTGFYQLIEFKAEPQVIEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (17%) "GO:0005737 (17%) GO:0005840 (17%) GO:1990904 (15.1%)" "GO:0003735 (17%) GO:0070181 (17%)" translation (17%) "cytoplasm (17%) ribosome (17%) ribonucleoprotein complex (15.1%)" "structural constituent of ribosome (17%) small ribosomal subunit rRNA binding (17%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" SNFGSYDKVDEVEEKDMVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" SADESVSDEEVSKIENR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.9 (100%) dihydroxy-acid dehydratase (100%) "GO:0009097 (16%) GO:0009099 (16%) GO:0008652 (0.6%)" GO:0005829 (16.7%) "GO:0004160 (16.7%) GO:0051537 (16.7%) GO:0000287 (16%)" "isoleucine biosynthetic process (16%) L-valine biosynthetic process (16%) amino acid biosynthetic process (0.6%)" cytosol (16.7%) "dihydroxy-acid dehydratase activity (16.7%) 2 iron, 2 sulfur cluster binding (16.7%) magnesium ion binding (16%)" "IPR000581 (16.7%) IPR004404 (16.7%) IPR020558 (16.7%)" "Dihydroxy-acid/6-phosphogluconate dehydratase, N-terminal (16.7%) Dihydroxy-acid dehydratase (16.7%) Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site (16.7%)" KFGEAIFGADKVLSKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" FEADKAER root "GO:0034605 (18.9%) GO:0042026 (18.1%) GO:0006508 (0.9%)" "GO:0005737 (18.9%) GO:0048189 (0.8%) GO:0009279 (0.1%)" "GO:0005524 (18.9%) GO:0016887 (18.9%) GO:0008233 (0.9%)" "cellular response to heat (18.9%) protein refolding (18.1%) proteolysis (0.9%)" "cytoplasm (18.9%) Lid2 complex (0.8%) cell outer membrane (0.1%)" "ATP binding (18.9%) ATP hydrolysis activity (18.9%) peptidase activity (0.9%)" "IPR027417 (8%) IPR001270 (8%) IPR003959 (8%)" "P-loop containing nucleoside triphosphate hydrolase (8%) ClpA/B family (8%) ATPase, AAA-type, core (8%)" DTILFEQPLDAADDKVTVYDLGKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.22 (100%) histidine decarboxylase (100%) GO:0006520 (50%) "GO:0016831 (46.7%) GO:0004398 (3.3%)" amino acid metabolic process (50%) "carboxy-lyase activity (46.7%) histidine decarboxylase activity (3.3%)" "IPR016104 (78.9%) IPR016105 (21.1%)" "Pyruvoyl-dependent histidine/arginine decarboxylase (78.9%) Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain (21.1%)" SLGNCIYLSDTADEVEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (25%) GO:0005829 (25%) "GO:0004830 (25%) GO:0005524 (25%)" tryptophanyl-tRNA aminoacylation (25%) cytosol (25%) "tryptophan-tRNA ligase activity (25%) ATP binding (25%)" "IPR001412 (20%) IPR002305 (20%) IPR002306 (20%)" "Aminoacyl-tRNA synthetase, class I, conserved site (20%) Aminoacyl-tRNA synthetase, class Ic (20%) Tryptophan-tRNA ligase (20%)" LKTDSVQILNKVELK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006354 (20%) GO:0032784 (20%)" "GO:0003746 (20.2%) GO:0003677 (20%) GO:0070063 (20%)" "DNA-templated transcription elongation (20%) regulation of DNA-templated transcription elongation (20%)" "translation elongation factor activity (20.2%) DNA binding (20%) RNA polymerase binding (20%)" "IPR001437 (12.7%) IPR006359 (12.7%) IPR022691 (12.7%)" "Transcription elongation factor, GreA/GreB, C-terminal (12.7%) Transcription elongation factor GreA (12.7%) Transcription elongation factor, GreA/GreB, N-terminal (12.7%)" ISGAGMMDCK root GO:0070125 (0.9%) "GO:0005737 (47.6%) GO:0005739 (1.3%) GO:0009507 (0.4%)" "GO:0003746 (49.3%) GO:0003729 (0.4%)" mitochondrial translational elongation (0.9%) "cytoplasm (47.6%) mitochondrion (1.3%) chloroplast (0.4%)" "translation elongation factor activity (49.3%) mRNA binding (0.4%)" "IPR001816 (20%) IPR009060 (20%) IPR018101 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor Ts, conserved site (20%)" AQMELMEEVGSTVKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (7.9%) IPR012162 (7.9%) IPR015847 (7.9%)" "Exoribonuclease, phosphorolytic domain 1 (7.9%) Polyribonucleotide nucleotidyltransferase (7.9%) Exoribonuclease, phosphorolytic domain 2 (7.9%)" NAMGKDTSDYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (32.6%) GO:0005829 (33.3%) "GO:0003677 (33.3%) GO:0016779 (0.8%)" regulation of DNA-templated transcription (32.6%) cytosol (33.3%) "DNA binding (33.3%) nucleotidyltransferase activity (0.8%)" "IPR002876 (16.7%) IPR017856 (16.7%) IPR026564 (16.7%)" "Transcriptional regulator TACO1-like (16.7%) Integrase-like, N-terminal (16.7%) Transcriptional regulator TACO1-like, domain 3 (16.7%)" GYTIQPYSPAAGTGLSSHELNQPGCYR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.4%) GO:0005737 (14.2%) "GO:0004822 (14.4%) GO:0005524 (14.4%) GO:0002161 (14.3%)" isoleucyl-tRNA aminoacylation (14.4%) cytoplasm (14.2%) "isoleucine-tRNA ligase activity (14.4%) ATP binding (14.4%) aminoacyl-tRNA deacylase activity (14.3%)" "IPR002300 (12.6%) IPR023586 (12.6%) IPR002301 (12.6%)" "Aminoacyl-tRNA synthetase, class Ia (12.6%) Isoleucine-tRNA ligase, type 2 (12.6%) Isoleucine-tRNA ligase (12.6%)" RAYYHETVEILEEKVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" GRPASDIYGGTIYVEVESTPDTIVLDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0033104 (100%) type VI protein secretion system complex (100%) IPR041408 (100%) Hemolysin coregulated protein (Hcp) TssD (100%) VHAETTGNAHFYALSEQECFDQVKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (22.7%) GO:0009317 (22.7%) "GO:0003989 (22.7%) GO:0004658 (22.7%) GO:0016740 (4.5%)" carbon fixation (22.7%) acetyl-CoA carboxylase complex (22.7%) "acetyl-CoA carboxylase activity (22.7%) propionyl-CoA carboxylase activity (22.7%) transferase activity (4.5%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" LLGDGSDYGVR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.24 (100%) glucose-1-phosphate thymidylyltransferase (100%) "GO:0008879 (50.5%) GO:0046872 (49.5%)" "glucose-1-phosphate thymidylyltransferase activity (50.5%) metal ion binding (49.5%)" "IPR005835 (33.3%) IPR005907 (33.3%) IPR029044 (33.3%)" "Nucleotidyl transferase domain (33.3%) Glucose-1-phosphate thymidylyltransferase, short form (33.3%) Nucleotide-diphospho-sugar transferases (33.3%)" RGEIALTYVYGIGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.8%) "GO:0005829 (16.8%) GO:0015935 (16.8%)" "GO:0003735 (16.8%) GO:0019843 (16.6%) GO:0000049 (15.9%)" translation (16.8%) "cytosol (16.8%) small ribosomal subunit (16.8%)" "structural constituent of ribosome (16.8%) rRNA binding (16.6%) tRNA binding (15.9%)" "IPR001892 (20.1%) IPR010979 (20.1%) IPR027437 (20.1%)" "Small ribosomal subunit protein uS13 (20.1%) Small ribosomal subunit protein uS13-like, H2TH (20.1%) Small ribosomal subunit protein uS13, C-terminal (20.1%)" VDRLEGMKENVICGHLIPAGTGQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) GO:0000428 (17.7%) "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0000287 (15.1%)" DNA-templated transcription (16.8%) DNA-directed RNA polymerase complex (17.7%) "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) magnesium ion binding (15.1%)" "IPR007081 (9.2%) IPR000722 (9.1%) IPR006592 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.2%) RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%)" ALKGQIPAGYPYTVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.4%) GO:0006402 (14.4%)" GO:0005829 (14.4%) "GO:0000175 (14.4%) GO:0003723 (14.4%) GO:0004654 (14.4%)" "RNA processing (14.4%) mRNA catabolic process (14.4%)" cytosol (14.4%) "3'-5'-RNA exonuclease activity (14.4%) RNA binding (14.4%) polyribonucleotide nucleotidyltransferase activity (14.4%)" "IPR001247 (7.8%) IPR012162 (7.8%) IPR015847 (7.8%)" "Exoribonuclease, phosphorolytic domain 1 (7.8%) Polyribonucleotide nucleotidyltransferase (7.8%) Exoribonuclease, phosphorolytic domain 2 (7.8%)" VDAEVAAYDQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001854 (50%) IPR036049 (50%)" "Large ribosomal subunit protein uL29 (50%) Large ribosomal subunit protein uL29 superfamily (50%)" NAFGAKPGDLILILSGDDAMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.12 (100%) aspartate--tRNA ligase (100%) GO:0006422 (20%) GO:0005737 (20%) "GO:0003676 (20%) GO:0004815 (20%) GO:0005524 (20%)" aspartyl-tRNA aminoacylation (20%) cytoplasm (20%) "nucleic acid binding (20%) aspartate-tRNA ligase activity (20%) ATP binding (20%)" "IPR002312 (9.1%) IPR004115 (9.1%) IPR004364 (9.1%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.1%) GAD-like domain superfamily (9.1%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.1%)" YGAPPHGGIAYGLDR Bacteria Bacteria "6.1.1.12 (88.1%) 6.1.1.23 (11.9%)" "aspartate--tRNA ligase (88.1%) aspartate--tRNA(Asn) ligase (11.9%)" GO:0006422 (18%) GO:0005737 (17.6%) "GO:0004815 (18%) GO:0005524 (18%) GO:0003676 (17%)" aspartyl-tRNA aminoacylation (18%) cytoplasm (17.6%) "aspartate-tRNA ligase activity (18%) ATP binding (18%) nucleic acid binding (17%)" "IPR004364 (9.4%) IPR045864 (9.4%) IPR002312 (9.2%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (9.4%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (9.4%) Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.2%)" GILGYTEDAVVSTDFR Pseudomonadati Bacteria Pseudomonadati "1.2.1.- (96%) 1.2.1.12 (4%)" "With NAD(+) or NADP(+) as acceptor (96%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (4%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (10.4%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (10.4%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" TPTENLVPLLDAIIEHIPAPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0009409 (10.1%) GO:0010467 (9.5%) GO:0000027 (8.9%)" "GO:0005829 (10.8%) GO:1990904 (10.8%)" "GO:0003924 (10.8%) GO:0005525 (10.8%) GO:0000049 (8.9%)" "response to cold (10.1%) gene expression (9.5%) ribosomal large subunit assembly (8.9%)" "cytosol (10.8%) ribonucleoprotein complex (10.8%)" "GTPase activity (10.8%) GTP binding (10.8%) tRNA binding (8.9%)" "IPR000795 (6.9%) IPR004161 (6.9%) IPR005225 (6.9%)" "Translational (tr)-type GTP-binding domain (6.9%) Translation elongation factor EFTu-like, domain 2 (6.9%) Small GTP-binding domain (6.9%)" MGGQMGNER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (25.7%) IPR009000 (25.7%) IPR019927 (25.7%)" "Large ribosomal subunit protein uL3 (25.7%) Translation protein, beta-barrel domain superfamily (25.7%) Large ribosomal subunit protein uL3, bacteria/organella (25.7%)" VSDAVPSSYLQNHPNAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.3%) GO:0006044 (32.3%)" "GO:0004342 (32.3%) GO:0016853 (3.2%)" "carbohydrate metabolic process (32.3%) N-acetylglucosamine metabolic process (32.3%)" "glucosamine-6-phosphate deaminase activity (32.3%) isomerase activity (3.2%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" NRGLAQGTDVSFGSFGLK root "GO:0006412 (19.7%) GO:0000027 (0.2%) GO:0002181 (0.2%)" "GO:0022625 (19.7%) GO:0005840 (1.5%) GO:0005737 (0.2%)" "GO:0003735 (19.8%) GO:0019843 (19.8%) GO:0000049 (18.7%)" "translation (19.7%) ribosomal large subunit assembly (0.2%) cytoplasmic translation (0.2%)" "cytosolic large ribosomal subunit (19.7%) ribosome (1.5%) cytoplasm (0.2%)" "structural constituent of ribosome (19.8%) rRNA binding (19.8%) tRNA binding (18.7%)" "IPR000114 (20.3%) IPR036920 (20.3%) IPR047873 (20.3%)" "Large ribosomal subunit protein uL16, bacteria (20.3%) Large ribosomal subunit protein uL16 superfamily (20.3%) Large ribosomal subunit protein uL16 (20.3%)" ATEKADMLYAEIDRNK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.8%) GO:0008615 (19.8%)" GO:0005737 (19.8%) "GO:0004648 (19.8%) GO:0030170 (19.8%) GO:0008483 (0.9%)" "L-serine biosynthetic process (19.8%) pyridoxine biosynthetic process (19.8%)" cytoplasm (19.8%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.8%) pyridoxal phosphate binding (19.8%) transaminase activity (0.9%)" "IPR000192 (20%) IPR015421 (20%) IPR015422 (20%)" "Aminotransferase class V domain (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" AAPMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 6.4.1.2 (100%) acetyl-CoA carboxylase (100%) "GO:0006633 (32.6%) GO:2001295 (0.4%)" "GO:0009317 (32.6%) GO:0005737 (0.4%) GO:0005829 (0.4%)" "GO:0003989 (32.6%) GO:0016874 (0.4%) GO:0060090 (0.4%)" "fatty acid biosynthetic process (32.6%) malonyl-CoA biosynthetic process (0.4%)" "acetyl-CoA carboxylase complex (32.6%) cytoplasm (0.4%) cytosol (0.4%)" "acetyl-CoA carboxylase activity (32.6%) ligase activity (0.4%) molecular adaptor activity (0.4%)" "IPR001249 (20.6%) IPR000089 (19.8%) IPR001882 (19.8%)" "Acetyl-CoA biotin carboxyl carrier (20.6%) Biotin/lipoyl attachment (19.8%) Biotin-binding site (19.8%)" AGNFKDAYTPWK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (59.6%) IPR019734 (40.4%)" "Tetratricopeptide-like helical domain superfamily (59.6%) Tetratricopeptide repeat (40.4%)" IVIRPLPGLPVIR root "1.3.5.1 (99.7%) 1.3.99.1 (0.1%) 1.3.5.- (0.1%)" "succinate dehydrogenase (99.7%) Deleted entry (0.1%) With a quinone or related compound as acceptor (0.1%)" "GO:0006099 (12.5%) GO:0022904 (12.5%) GO:0009060 (0%)" "GO:0005743 (0%) GO:0005886 (0%) GO:0016020 (0%)" "GO:0009055 (12.5%) GO:0051539 (12.4%) GO:0046872 (12.4%)" "tricarboxylic acid cycle (12.5%) respiratory electron transport chain (12.5%) aerobic respiration (0%)" "mitochondrial inner membrane (0%) plasma membrane (0%) membrane (0%)" "electron transfer activity (12.5%) 4 iron, 4 sulfur cluster binding (12.4%) metal ion binding (12.4%)" "IPR025192 (11.5%) IPR050573 (11.5%) IPR004489 (11.5%)" "Succinate dehydogenase/fumarate reductase N-terminal (11.5%) Succinate Dehydrogenase/Fumarate Reductase Iron-Sulfur (11.5%) Succinate dehydrogenase/fumarate reductase iron-sulphur protein (11.5%)" DIYHCNEGHAALINVQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.2%) "GO:0030170 (33.2%) GO:0008184 (31.1%) GO:0004645 (2.1%)" carbohydrate metabolic process (33.2%) "pyridoxal phosphate binding (33.2%) glycogen phosphorylase activity (31.1%) 1,4-alpha-oligoglucan phosphorylase activity (2.1%)" "IPR011834 (25.5%) IPR052182 (25.5%) IPR024517 (25.1%)" "Alpha-glucan phosphorylase (25.5%) Glycogen_Maltodextrin_Phosphorylase (25.5%) Glycogen phosphorylase, domain of unknown function DUF3417 (25.1%)" MAEGIYDKEEYAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR004216 (11.1%) IPR005763 (11.1%) IPR009015 (11.1%)" "L-fucose/L-arabinose isomerase, C-terminal (11.1%) L-fucose isomerase (11.1%) L-fucose isomerase, N-terminal/central domain superfamily (11.1%)" MIVTLLPDTGER root 2.5.1.47 (100%) cysteine synthase (100%) GO:0006535 (45.5%) GO:0005737 (5.5%) "GO:0004124 (45.5%) GO:0016846 (3.6%)" cysteine biosynthetic process from serine (45.5%) cytoplasm (5.5%) "cysteine synthase activity (45.5%) carbon-sulfur lyase activity (3.6%)" "IPR001926 (17%) IPR005856 (17%) IPR005859 (17%)" "Tryptophan synthase beta chain-like, PALP domain (17%) Cysteine synthase (17%) Cysteine synthase CysK (17%)" AAYPIESVRENK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.6%) "GO:0005960 (16.6%) GO:0005829 (16.5%)" "GO:0004375 (16.6%) GO:0016594 (16.6%) GO:0030170 (16.6%)" glycine decarboxylation via glycine cleavage system (16.6%) "glycine cleavage complex (16.6%) cytosol (16.5%)" "glycine dehydrogenase (decarboxylating) activity (16.6%) glycine binding (16.6%) pyridoxal phosphate binding (16.6%)" "IPR015421 (14.3%) IPR015422 (14.3%) IPR015424 (14.3%)" "Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%) Pyridoxal phosphate-dependent transferase (14.3%)" ILNDIKRPFTAIMGGSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" YCINSASLR root "1.8.4.12 (75.2%) 1.8.4.11 (24.7%) 1.8.4.- (0.1%)" "peptide-methionine (R)-S-oxide reductase (75.2%) peptide-methionine (S)-S-oxide reductase (24.7%) With a disulfide as acceptor (0.1%)" "GO:0006979 (20.3%) GO:0030091 (20.3%) GO:0034599 (0.6%)" "GO:0005737 (20.9%) GO:0016020 (0.1%) GO:0005886 (0%)" "GO:0033743 (22%) GO:0008113 (8.2%) GO:0033744 (4.9%)" "response to oxidative stress (20.3%) protein repair (20.3%) cellular response to oxidative stress (0.6%)" "cytoplasm (20.9%) membrane (0.1%) plasma membrane (0%)" "peptide-methionine (R)-S-oxide reductase activity (22%) peptide-methionine (S)-S-oxide reductase activity (8.2%) L-methionine (S)-S-oxide reductase activity (4.9%)" "IPR002579 (27%) IPR011057 (27%) IPR028427 (25%)" "Peptide methionine sulphoxide reductase MrsB domain (27%) Mss4-like superfamily (27%) Peptide methionine sulfoxide reductase MsrB (25%)" VLSGPGLVNLYR root 2.7.1.2 (100%) glucokinase (100%) GO:0006096 (19.9%) "GO:0005829 (19.9%) GO:0016020 (0.1%) GO:0005737 (0%)" "GO:0004340 (19.9%) GO:0005524 (19.9%) GO:0005536 (19.9%)" glycolytic process (19.9%) "cytosol (19.9%) membrane (0.1%) cytoplasm (0%)" "glucokinase activity (19.9%) ATP binding (19.9%) D-glucose binding (19.9%)" "IPR003836 (33.3%) IPR043129 (33.3%) IPR050201 (33.3%)" "Glucokinase (33.3%) ATPase, nucleotide binding domain (33.3%) Bacterial glucokinase (33.3%)" TILAERPNLINGGIQYFNLNKNEDALK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" IGFIAGPEWIVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.6.1.- (98.9%) 2.6.1.1 (1.1%)" "Transaminases (98.9%) aspartate transaminase (1.1%)" GO:0006520 (33.3%) "GO:0008483 (33.5%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.5%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" GEGLVLMDNPEKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0019877 (11.3%) GO:0009088 (10.7%) GO:0009089 (10.7%)" "GO:0004073 (11.3%) GO:0046983 (11.3%) GO:0050661 (11.3%)" "diaminopimelate biosynthetic process (11.3%) threonine biosynthetic process (10.7%) lysine biosynthetic process via diaminopimelate (10.7%)" "aspartate-semialdehyde dehydrogenase activity (11.3%) protein dimerization activity (11.3%) NADP binding (11.3%)" "IPR012280 (17.5%) IPR000319 (17%) IPR000534 (16.5%)" "Semialdehyde dehydrogenase, dimerisation domain (17.5%) Aspartate-semialdehyde dehydrogenase, conserved site (17%) Semialdehyde dehydrogenase, NAD-binding (16.5%)" MRYTYFASVAK Pseudomonadati Bacteria Pseudomonadati "1.11.1.1 (50%) 1.14.13.81 (50%)" "NADH peroxidase (50%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (50%)" "GO:0005506 (49.4%) GO:0016491 (49.4%) GO:0046872 (0.6%)" "iron ion binding (49.4%) oxidoreductase activity (49.4%) metal ion binding (0.6%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" QGCTIVQPLDMEVGAGTSHPMTCLR root 6.1.1.14 (100%) glycine--tRNA ligase (100%) GO:0006426 (24.9%) "GO:0005829 (24.8%) GO:0005737 (0.1%) GO:0009345 (0%)" "GO:0004820 (24.9%) GO:0005524 (24.9%) GO:0016874 (0.2%)" glycyl-tRNA aminoacylation (24.9%) "cytosol (24.8%) cytoplasm (0.1%) glycine-tRNA ligase complex (0%)" "glycine-tRNA ligase activity (24.9%) ATP binding (24.9%) ligase activity (0.2%)" "IPR002310 (33.3%) IPR006194 (33.3%) IPR045864 (33.3%)" "Glycine-tRNA ligase, alpha subunit (33.3%) Glycine-tRNA synthetase, heterodimeric (33.3%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (33.3%)" DAIDYTLYPDYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (17%) IPR014628 (17%) IPR014710 (17%)" "RmlC-like cupin domain superfamily (17%) Mannose-6-phosphate isomerase, Firmicutes type, short form (17%) RmlC-like jelly roll fold (17%)" IKEFEEAFASYVGCK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.92 (100%) UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase (100%) GO:0000271 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" polysaccharide biosynthetic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000653 (20%) IPR015421 (20%) IPR015422 (20%)" "DegT/DnrJ/EryC1/StrS aminotransferase (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" SIDAVLVATADHTHAMITADAMTLGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (91.7%) GO:0050112 (8.3%)" "nucleotide binding (91.7%) inositol 2-dehydrogenase (NAD+) activity (8.3%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" QLIDLALLQNNMLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006457 (0.2%) GO:0006974 (0.2%) GO:0009408 (0.2%)" "GO:0005737 (7.7%) GO:0005829 (0.2%)" "GO:0005524 (22.2%) GO:0016887 (22.2%) GO:0051082 (22.2%)" "protein folding (0.2%) DNA damage response (0.2%) response to heat (0.2%)" "cytoplasm (7.7%) cytosol (0.2%)" "ATP binding (22.2%) ATP hydrolysis activity (22.2%) unfolded protein binding (22.2%)" "IPR020568 (19%) IPR001404 (18.8%) IPR036890 (18.4%)" "Ribosomal protein uS5 domain 2-type superfamily (19%) Heat shock protein Hsp90 family (18.8%) Histidine kinase/HSP90-like ATPase superfamily (18.4%)" NVTAGASPMDIK Pseudomonadati Bacteria Pseudomonadati 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (19.4%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (11.9%) GO:1990220 (0.1%)" "GO:0005524 (19.4%) GO:0140662 (19.4%) GO:0016853 (17.6%)" "protein refolding (19.4%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (11.9%) GroEL-GroES complex (0.1%)" "ATP binding (19.4%) ATP-dependent protein folding chaperone (19.4%) isomerase activity (17.6%)" "IPR001844 (17.7%) IPR002423 (17.7%) IPR027410 (17.7%)" "Chaperonin Cpn60/GroEL (17.7%) Chaperonin Cpn60/GroEL/TCP-1 family (17.7%) TCP-1-like chaperonin intermediate domain superfamily (17.7%)" NVPCTVIEAGPCVVTQIK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" VIECSDLAPLHNPANLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" GETLKDTILMVSNYVDLIIMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006520 (16.8%) GO:0006207 (16%) GO:0044205 (16%)" GO:0005829 (16.8%) "GO:0016597 (16.8%) GO:0004070 (16%) GO:0016743 (0.8%)" "amino acid metabolic process (16.8%) 'de novo' pyrimidine nucleobase biosynthetic process (16%) 'de novo' UMP biosynthetic process (16%)" cytosol (16.8%) "amino acid binding (16.8%) aspartate carbamoyltransferase activity (16%) carboxyl- or carbamoyltransferase activity (0.8%)" "IPR006130 (20.4%) IPR006132 (20.4%) IPR036901 (20.4%)" "Aspartate/ornithine carbamoyltransferase (20.4%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20.4%) Aspartate/ornithine carbamoyltransferase superfamily (20.4%)" AAGLDTASGEPNKKK Bacillota Bacteria Bacillati Bacillota GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (15.3%) IPR006519 (15.3%) IPR020783 (15.3%)" "Ribosomal protein uL11 (15.3%) Large ribosomal subunit protein uL11, bacteria (15.3%) Large ribosomal subunit protein uL11, C-terminal (15.3%)" IAEAEKGHEER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.14.13.81 (100%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (100%) "GO:0005506 (50%) GO:0016491 (47.4%) GO:0048529 (2.6%)" "iron ion binding (50%) oxidoreductase activity (47.4%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity (2.6%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" FLDSVMGPNKLIER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033103 (50%) GO:0033104 (50%) protein secretion by the type VI secretion system (50%) type VI protein secretion system complex (50%) IPR035576 (100%) Type VI secretion system TssC (100%) MNIYVGNLSYR Bacteria Bacteria "GO:0009967 (4.4%) GO:0010629 (4.4%)" GO:0005737 (4.4%) "GO:0003723 (79.4%) GO:0003729 (7.4%)" "positive regulation of signal transduction (4.4%) negative regulation of gene expression (4.4%)" cytoplasm (4.4%) "RNA binding (79.4%) mRNA binding (7.4%)" "IPR000504 (20%) IPR012677 (20%) IPR035979 (20%)" "RNA recognition motif domain (20%) Nucleotide-binding alpha-beta plait domain superfamily (20%) RNA-binding domain superfamily (20%)" YKQHVDELYATEEYKQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (16.9%) GO:0009090 (16.9%) GO:0009088 (14.6%)" GO:0005829 (16.9%) "GO:0004072 (16.9%) GO:0005524 (16.9%) GO:0016301 (1.1%)" "lysine biosynthetic process via diaminopimelate (16.9%) homoserine biosynthetic process (16.9%) threonine biosynthetic process (14.6%)" cytosol (16.9%) "aspartate kinase activity (16.9%) ATP binding (16.9%) kinase activity (1.1%)" "IPR001048 (12.5%) IPR001341 (12.5%) IPR005260 (12.5%)" "Aspartate/glutamate/uridylate kinase (12.5%) Aspartate kinase (12.5%) Aspartate kinase, monofunctional class (12.5%)" MAASLFIDKENPADPKEYKEILER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (33.3%) "GO:0008448 (33.3%) GO:0046872 (33.3%)" N-acetylglucosamine catabolic process (33.3%) "N-acetylglucosamine-6-phosphate deacetylase activity (33.3%) metal ion binding (33.3%)" "IPR003764 (25%) IPR006680 (25%) IPR011059 (25%)" "N-acetylglucosamine-6-phosphate deacetylase (25%) Amidohydrolase-related (25%) Metal-dependent hydrolase, composite domain superfamily (25%)" ELKQTIVHGQGEFHLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.1%) "GO:0003746 (25.1%) GO:0005525 (25.1%) GO:0003924 (24.8%)" ribosome disassembly (25.1%) "translation elongation factor activity (25.1%) GTP binding (25.1%) GTPase activity (24.8%)" "IPR005517 (7.5%) IPR009000 (7.5%) IPR014721 (7.5%)" "Translation elongation factor EFG/EF2, domain IV (7.5%) Translation protein, beta-barrel domain superfamily (7.5%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (7.5%)" KMKVDAPVDAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (58.7%) IPR019734 (39.1%) IPR036737 (2.2%)" "Tetratricopeptide-like helical domain superfamily (58.7%) Tetratricopeptide repeat (39.1%) OmpA-like domain superfamily (2.2%)" MHPVDSNEISFMLAGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.3%) "GO:0003746 (25.4%) GO:0005525 (25.3%) GO:0003924 (24%)" ribosome disassembly (25.3%) "translation elongation factor activity (25.4%) GTP binding (25.3%) GTPase activity (24%)" "IPR000640 (7.7%) IPR005517 (7.7%) IPR014721 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translation elongation factor EFG/EF2, domain IV (7.7%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (7.7%)" GIGHGNLAAR Pseudomonadati Bacteria Pseudomonadati IPR025964 (100%) GGGtGRT protein (100%) SGPLGGDQQMGSR Bacteria Bacteria 4.2.3.3 (100%) methylglyoxal synthase (100%) GO:0019242 (33.3%) GO:0005829 (33.3%) GO:0008929 (33.3%) methylglyoxal biosynthetic process (33.3%) cytosol (33.3%) methylglyoxal synthase activity (33.3%) "IPR004363 (25%) IPR011607 (25%) IPR018148 (25%)" "Methylglyoxal synthase (25%) Methylglyoxal synthase-like domain (25%) Methylglyoxal synthase, active site (25%)" VADGENANVNSIEHKDDLEAASR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR019859 (20%) IPR022719 (20%) IPR022720 (20%)" "Gliding motility-associated protein GldM (20%) Gliding motility-associated protein GldM, C-terminal (20%) Gliding motility-associated protein GldM, N-terminal (20%)" LIRDGIVVFTGAINALKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (9.3%) IPR009000 (9.3%) IPR015760 (9.3%)" "Translation initiation factor IF-2, bacterial-like (9.3%) Translation protein, beta-barrel domain superfamily (9.3%) Translation initiation factor IF- 2 (9.3%)" AEIPLEDAVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (33.8%) "GO:0008448 (33.8%) GO:0046872 (32.4%)" N-acetylglucosamine catabolic process (33.8%) "N-acetylglucosamine-6-phosphate deacetylase activity (33.8%) metal ion binding (32.4%)" "IPR006680 (25.1%) IPR011059 (25.1%) IPR032466 (25.1%)" "Amidohydrolase-related (25.1%) Metal-dependent hydrolase, composite domain superfamily (25.1%) Metal-dependent hydrolase (25.1%)" AVTDVVVTSTNAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.5.1.72 (100%) quinolinate synthase (100%) GO:0034628 (20%) GO:0005829 (20%) "GO:0008987 (20%) GO:0046872 (20%) GO:0051539 (20%)" 'de novo' NAD+ biosynthetic process from L-aspartate (20%) cytosol (20%) "quinolinate synthetase A activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR003473 (33.3%) IPR023066 (33.3%) IPR036094 (33.3%)" "Quinolinate synthetase A (33.3%) Quinolinate synthase A, type 2 (33.3%) Quinolinate synthetase A superfamily (33.3%)" ITFNAPTVPVVNNVDVK root "2.3.1.39 (99.5%) 2.3.1.180 (0.5%)" "[acyl-carrier-protein] S-malonyltransferase (99.5%) beta-ketoacyl-[acyl-carrier-protein] synthase III (0.5%)" GO:0006633 (33.1%) GO:0005829 (32.9%) "GO:0004314 (33.1%) GO:0016746 (0.7%) GO:0004315 (0.2%)" fatty acid biosynthetic process (33.1%) cytosol (32.9%) "[acyl-carrier-protein] S-malonyltransferase activity (33.1%) acyltransferase activity (0.7%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (0.2%)" "IPR001227 (14.6%) IPR016035 (14.6%) IPR050858 (14.6%)" "Acyl transferase domain superfamily (14.6%) Acyl transferase/acyl hydrolase/lysophospholipase (14.6%) Malonyl CoA-ACP Transacylase/Polyketide Synthase FabD (14.6%)" YCSFLPVPIAFGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006457 (0.3%) GO:0006974 (0.3%) GO:0009408 (0.3%)" "GO:0005737 (7.1%) GO:0005829 (0.3%)" "GO:0005524 (22.4%) GO:0016887 (22.4%) GO:0051082 (22.4%)" "protein folding (0.3%) DNA damage response (0.3%) response to heat (0.3%)" "cytoplasm (7.1%) cytosol (0.3%)" "ATP binding (22.4%) ATP hydrolysis activity (22.4%) unfolded protein binding (22.4%)" "IPR001404 (17.1%) IPR020568 (17.1%) IPR020575 (17.1%)" "Heat shock protein Hsp90 family (17.1%) Ribosomal protein uS5 domain 2-type superfamily (17.1%) Heat shock protein Hsp90, N-terminal (17.1%)" YTEINVIDNYAPTAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006508 (50%) GO:0008233 (50%) proteolysis (50%) peptidase activity (50%) "IPR002931 (49.1%) IPR038765 (48.7%) IPR008964 (1.1%)" "Transglutaminase-like (49.1%) Papain-like cysteine peptidase superfamily (48.7%) Invasin/intimin cell-adhesion fragments (1.1%)" DLLGATNPANALAGTLR root 2.7.4.6 (100%) nucleoside-diphosphate kinase (100%) "GO:0006183 (14.2%) GO:0006228 (14.2%) GO:0006241 (14.2%)" "GO:0005737 (14.1%) GO:0005829 (0%)" "GO:0004550 (14.2%) GO:0005524 (14.2%) GO:0046872 (14.2%)" "GTP biosynthetic process (14.2%) UTP biosynthetic process (14.2%) CTP biosynthetic process (14.2%)" "cytoplasm (14.1%) cytosol (0%)" "nucleoside diphosphate kinase activity (14.2%) ATP binding (14.2%) metal ion binding (14.2%)" "IPR001564 (25.1%) IPR034907 (25.1%) IPR036850 (25.1%)" "Nucleoside diphosphate kinase (25.1%) Nucleoside diphosphate kinase-like domain (25.1%) Nucleoside diphosphate kinase-like domain superfamily (25.1%)" SESYAIVPDYYNGILPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (20%) IPR011053 (20%) IPR022615 (20%)" "Na(+)-translocating NADH-quinone reductase subunit A (20%) Single hybrid motif (20%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (20%)" KVDLVFAPSVK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 6.3.2.1 (100%) pantoate--beta-alanine ligase (AMP-forming) (100%) GO:0015940 (24.7%) GO:0005829 (24.7%) "GO:0004592 (24.7%) GO:0005524 (24.7%) GO:0016874 (0.8%)" pantothenate biosynthetic process (24.7%) cytosol (24.7%) "pantoate-beta-alanine ligase activity (24.7%) ATP binding (24.7%) ligase activity (0.8%)" "IPR003721 (25.6%) IPR014729 (25.6%) IPR004821 (24.6%)" "Pantoate-beta-alanine ligase (25.6%) Rossmann-like alpha/beta/alpha sandwich fold (25.6%) Cytidyltransferase-like domain (24.6%)" SMQDPIADMLTR root "GO:0006412 (16.9%) GO:0002181 (0%) GO:0000028 (0%)" "GO:0005840 (17%) GO:1990904 (16.8%) GO:0005737 (15.4%)" "GO:0003735 (16.9%) GO:0019843 (16.8%)" "translation (16.9%) cytoplasmic translation (0%) ribosomal small subunit assembly (0%)" "ribosome (17%) ribonucleoprotein complex (16.8%) cytoplasm (15.4%)" "structural constituent of ribosome (16.9%) rRNA binding (16.8%)" "IPR000630 (33.3%) IPR035987 (33.3%) IPR047863 (33%)" "Small ribosomal subunit protein uS8 (33.3%) Small ribosomal subunit protein uS8 superfamily (33.3%) Small ribosomal subunit protein uS8, conserved site (33%)" VIADLKEYGTVQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.4.21.107 (57.1%) 3.4.21.- (42.9%)" "peptidase Do (57.1%) Serine endopeptidases (42.9%)" GO:0006508 (50%) "GO:0004252 (48.1%) GO:0008233 (1.9%)" proteolysis (50%) "serine-type endopeptidase activity (48.1%) peptidase activity (1.9%)" "IPR001478 (17.1%) IPR036034 (16.5%) IPR001940 (15.8%)" "PDZ domain (17.1%) PDZ superfamily (16.5%) Peptidase S1C (15.8%)" YLNVYGEKDLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" THYGIGNNSPISDNEIHEIIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0034599 (33.3%) GO:0005737 (33.3%) GO:0016491 (33.3%) cellular response to oxidative stress (33.3%) cytoplasm (33.3%) oxidoreductase activity (33.3%) "IPR000415 (33.3%) IPR029479 (33.3%) IPR033877 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase Frm2/Hbn1-like (33.3%)" LNEACVEQAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR015943 (50%) IPR031815 (43.8%) IPR011047 (6.3%)" "WD40/YVTN repeat-like-containing domain superfamily (50%) Protein of unknown function DUF5074 (43.8%) Quinoprotein alcohol dehydrogenase-like superfamily (6.3%)" IQLNDAFAETSEIQDYIAQEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0015031 (33.3%) GO:0005886 (33.3%) GO:0022857 (33.3%) protein transport (33.3%) plasma membrane (33.3%) transmembrane transporter activity (33.3%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) GDQYPIALEGALK root 2.6.1.16 (100%) glutamine--fructose-6-phosphate transaminase (isomerizing) (100%) "GO:0006002 (12.6%) GO:0006487 (12.6%) GO:0006047 (12.6%)" "GO:0005829 (12.6%) GO:0016020 (0%)" "GO:0004360 (12.6%) GO:0097367 (12.6%) GO:0008483 (0.2%)" "fructose 6-phosphate metabolic process (12.6%) protein N-linked glycosylation (12.6%) UDP-N-acetylglucosamine metabolic process (12.6%)" "cytosol (12.6%) membrane (0%)" "glutamine-fructose-6-phosphate transaminase (isomerizing) activity (12.6%) carbohydrate derivative binding (12.6%) transaminase activity (0.2%)" "IPR001347 (12.7%) IPR046348 (12.7%) IPR035490 (12.7%)" "SIS domain (12.7%) SIS domain superfamily (12.7%) GlmS/FrlB, SIS domain 2 (12.7%)" ACQIVSLHIPATAETK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (47.4%) GO:0016616 (36.8%) GO:0004617 (10.5%)" "NAD binding (47.4%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (36.8%) phosphoglycerate dehydrogenase activity (10.5%)" "IPR006139 (23.7%) IPR006140 (23.7%) IPR029752 (23.7%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (23.7%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (23.7%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 (23.7%)" GLIDPGESVYEAANR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "3.6.1.- (87.8%) 3.6.1.13 (4.1%) 3.6.1.22 (4.1%)" "In phosphorus-containing anhydrides (87.8%) ADP-ribose diphosphatase (4.1%) NAD(+) diphosphatase (4.1%)" "GO:0006753 (23.4%) GO:0019693 (23.4%)" GO:0005829 (23.4%) "GO:0019144 (23.4%) GO:0016787 (4%) GO:0047631 (1%)" "nucleoside phosphate metabolic process (23.4%) ribose phosphate metabolic process (23.4%)" cytosol (23.4%) "ADP-sugar diphosphatase activity (23.4%) hydrolase activity (4%) ADP-ribose diphosphatase activity (1%)" "IPR000086 (33.3%) IPR015797 (33.3%) IPR020084 (33.3%)" "NUDIX hydrolase domain (33.3%) NUDIX hydrolase-like domain superfamily (33.3%) NUDIX hydrolase, conserved site (33.3%)" AGGSVCPPSYFTVDHK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) "GO:0006633 (20.2%) GO:0044550 (20.2%)" GO:0005737 (20.2%) "GO:0004315 (20.2%) GO:0033818 (19%)" "fatty acid biosynthetic process (20.2%) secondary metabolite biosynthetic process (20.2%)" cytoplasm (20.2%) "3-oxoacyl-[acyl-carrier-protein] synthase activity (20.2%) beta-ketoacyl-acyl-carrier-protein synthase III activity (19%)" "IPR004655 (25%) IPR013747 (25%) IPR013751 (25%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III (25%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (25%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (25%)" FGELDYAHMK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0034605 (17.9%) GO:0042026 (14.2%) GO:0006508 (0.1%)" "GO:0005829 (13.5%) GO:0005737 (4.6%) GO:0016020 (0.1%)" "GO:0005524 (17.9%) GO:0016887 (17.9%) GO:0042802 (13.5%)" "cellular response to heat (17.9%) protein refolding (14.2%) proteolysis (0.1%)" "cytosol (13.5%) cytoplasm (4.6%) membrane (0.1%)" "ATP binding (17.9%) ATP hydrolysis activity (17.9%) identical protein binding (13.5%)" "IPR027417 (9.3%) IPR050130 (9.3%) IPR003959 (9.2%)" "P-loop containing nucleoside triphosphate hydrolase (9.3%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (9.3%) ATPase, AAA-type, core (9.2%)" HGPLALIDADMPVIVVAPNNELLEK root 2.6.1.16 (100%) glutamine--fructose-6-phosphate transaminase (isomerizing) (100%) "GO:0006002 (12.6%) GO:0006487 (12.6%) GO:0006047 (12.6%)" "GO:0005829 (12.6%) GO:0005737 (0%)" "GO:0004360 (12.6%) GO:0097367 (12.6%) GO:0008483 (0.2%)" "fructose 6-phosphate metabolic process (12.6%) protein N-linked glycosylation (12.6%) UDP-N-acetylglucosamine metabolic process (12.6%)" "cytosol (12.6%) cytoplasm (0%)" "glutamine-fructose-6-phosphate transaminase (isomerizing) activity (12.6%) carbohydrate derivative binding (12.6%) transaminase activity (0.2%)" "IPR001347 (12.8%) IPR035490 (12.8%) IPR046348 (12.7%)" "SIS domain (12.8%) GlmS/FrlB, SIS domain 2 (12.8%) SIS domain superfamily (12.7%)" TTCPTCNGEGK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006260 (12.9%) GO:0042026 (12.9%) GO:0009408 (10.8%)" GO:0005737 (12.9%) "GO:0008270 (12.9%) GO:0031072 (12.9%) GO:0051082 (12.9%)" "DNA replication (12.9%) protein refolding (12.9%) response to heat (10.8%)" cytoplasm (12.9%) "zinc ion binding (12.9%) heat shock protein binding (12.9%) unfolded protein binding (12.9%)" "IPR001305 (12.8%) IPR001623 (12.8%) IPR002939 (12.8%)" "Heat shock protein DnaJ, cysteine-rich domain (12.8%) DnaJ domain (12.8%) Chaperone DnaJ, C-terminal (12.8%)" TLVILKPCTIQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.4.6 (100%) nucleoside-diphosphate kinase (100%) "GO:0006183 (17.6%) GO:0006228 (17.6%) GO:0006241 (17.6%)" GO:0005737 (0.7%) "GO:0004550 (17.6%) GO:0005524 (15.4%) GO:0046872 (13.1%)" "GTP biosynthetic process (17.6%) UTP biosynthetic process (17.6%) CTP biosynthetic process (17.6%)" cytoplasm (0.7%) "nucleoside diphosphate kinase activity (17.6%) ATP binding (15.4%) metal ion binding (13.1%)" "IPR001564 (27.9%) IPR034907 (27.9%) IPR036850 (27.9%)" "Nucleoside diphosphate kinase (27.9%) Nucleoside diphosphate kinase-like domain (27.9%) Nucleoside diphosphate kinase-like domain superfamily (27.9%)" KRVESLCEHNPMLGHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" KVIWGGSDICPFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (32.4%) "GO:0004476 (32.4%) GO:0008270 (32.4%) GO:0016853 (2.7%)" carbohydrate metabolic process (32.4%) "mannose-6-phosphate isomerase activity (32.4%) zinc ion binding (32.4%) isomerase activity (2.7%)" "IPR011051 (18.3%) IPR014710 (18.3%) IPR014628 (16.9%)" "RmlC-like cupin domain superfamily (18.3%) RmlC-like jelly roll fold (18.3%) Mannose-6-phosphate isomerase, Firmicutes type, short form (16.9%)" EIQSDQDTEVLISGKK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 2.3.1.50 (100%) serine C-palmitoyltransferase (100%) GO:0030148 (22.9%) GO:0016020 (22.9%) "GO:0030170 (25.7%) GO:0008483 (17.1%) GO:0016740 (5.7%)" sphingolipid biosynthetic process (22.9%) membrane (22.9%) "pyridoxal phosphate binding (25.7%) transaminase activity (17.1%) transferase activity (5.7%)" "IPR001917 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class-II, pyridoxal-phosphate binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" NGLKVEDADIENFAKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" ITESQFLWQHNQDPMAVDKLAEGIRK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (26.7%) GO:0006098 (23.3%)" GO:0005829 (23.3%) GO:0004801 (26.7%) "carbohydrate metabolic process (26.7%) pentose-phosphate shunt (23.3%)" cytosol (23.3%) transaldolase activity (26.7%) "IPR001585 (26.5%) IPR013785 (26.5%) IPR004730 (23.5%)" "Transaldolase/Fructose-6-phosphate aldolase (26.5%) Aldolase-type TIM barrel (26.5%) Transaldolase type 1 (23.5%)" IIEQHINEPEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.2.1.20 (100%) tryptophan synthase (100%) "GO:0000162 (0.2%) GO:0009073 (0.2%)" "GO:0005829 (49.3%) GO:0005737 (0.2%)" "GO:0004834 (49.3%) GO:0016829 (0.6%) GO:0060090 (0.2%)" "L-tryptophan biosynthetic process (0.2%) aromatic amino acid family biosynthetic process (0.2%)" "cytosol (49.3%) cytoplasm (0.2%)" "tryptophan synthase activity (49.3%) lyase activity (0.6%) molecular adaptor activity (0.2%)" "IPR002028 (25.2%) IPR011060 (25.2%) IPR013785 (25.2%)" "Tryptophan synthase, alpha chain (25.2%) Ribulose-phosphate binding barrel (25.2%) Aldolase-type TIM barrel (25.2%)" VKESIAAQFVADSDYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.3%) GO:0043335 (16.3%) GO:0051083 (16.3%)" "GO:0003755 (16.3%) GO:0043022 (16.3%) GO:0044183 (16.3%)" "protein transport (16.3%) protein unfolding (16.3%) 'de novo' cotranslational protein folding (16.3%)" "peptidyl-prolyl cis-trans isomerase activity (16.3%) ribosome binding (16.3%) protein folding chaperone (16.3%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" GGCDLPAKPNQWGNFSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" TLHPDNMAAGPSSYGMTDTMGR Clostridia Bacteria Bacillati Bacillota Clostridia IPR025964 (100%) GGGtGRT protein (100%) AGGPEENWVWTPTGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016052 (33.3%) "GO:0004553 (33.3%) GO:0030246 (33.3%)" carbohydrate catabolic process (33.3%) "hydrolase activity, hydrolyzing O-glycosyl compounds (33.3%) carbohydrate binding (33.3%)" "IPR003790 (50.8%) IPR010502 (49.2%)" "Glycosyl hydrolase-like 10 (50.8%) Carbohydrate-binding domain, family 9 (49.2%)" IDLHRPYVDDIILVSASGKPMKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004822 (14.3%)" isoleucyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) isoleucine-tRNA ligase activity (14.3%)" "IPR002300 (12.5%) IPR002301 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class Ia (12.5%) Isoleucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" DKVISLGDIAIYTDETEVPLHEVLTSVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR041218 (25%) IPR049280 (25%) IPR049281 (25%)" "Domain of unknown function DUF5606 (25%) Domain of unknown function DUF6852 (25%) BVU_3817-like, C-terminal domain superfamily (25%)" AKNTLAGIATPDAYTDYLMAVLGAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" ATAQVLRDNCEVVVVAGIGGSYLGAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.2%) GO:0006096 (14.2%) GO:0051156 (14.2%)" GO:0005829 (14.2%) "GO:0004347 (14.2%) GO:0048029 (14.2%) GO:0097367 (14.2%)" "gluconeogenesis (14.2%) glycolytic process (14.2%) glucose 6-phosphate metabolic process (14.2%)" cytosol (14.2%) "glucose-6-phosphate isomerase activity (14.2%) monosaccharide binding (14.2%) carbohydrate derivative binding (14.2%)" "IPR001672 (19.7%) IPR018189 (19.7%) IPR035476 (19.7%)" "Phosphoglucose isomerase (PGI) (19.7%) Phosphoglucose isomerase, conserved site (19.7%) Phosphoglucose isomerase, SIS domain 1 (19.7%)" IVVNGAGASATSCTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (17%) "GO:0051287 (17.4%) GO:0016746 (17%) GO:0046872 (17%)" malate metabolic process (17%) "NAD binding (17.4%) acyltransferase activity (17%) metal ion binding (17%)" "IPR012301 (9.2%) IPR012302 (9.2%) IPR036291 (9.2%)" "Malic enzyme, N-terminal domain (9.2%) Malic enzyme, NAD-binding (9.2%) NAD(P)-binding domain superfamily (9.2%)" VFQDNAGGIIRDPEAKPEAQILVNNPR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.177 (100%) alpha-D-xyloside xylohydrolase (100%) GO:0000272 (33.3%) "GO:0030246 (33.3%) GO:0004553 (27.8%) GO:0061634 (5.6%)" polysaccharide catabolic process (33.3%) "carbohydrate binding (33.3%) hydrolase activity, hydrolyzing O-glycosyl compounds (27.8%) alpha-D-xyloside xylohydrolase (5.6%)" "IPR000322 (5.9%) IPR000421 (5.9%) IPR002105 (5.9%)" "Glycoside hydrolase family 31, TIM barrel domain (5.9%) Coagulation factor 5/8, C-terminal domain (5.9%) Dockerin type I repeat (5.9%)" IAVQEAAPEKHEDMSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (1.4%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (1.4%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" IVFLDTPGHEAFTSMR root "GO:0005829 (21.7%) GO:0009507 (1.8%) GO:0009536 (1.5%)" "GO:0003743 (24.7%) GO:0003924 (24.7%) GO:0005525 (24.7%)" "cytosol (21.7%) chloroplast (1.8%) plastid (1.5%)" "translation initiation factor activity (24.7%) GTPase activity (24.7%) GTP binding (24.7%)" "IPR000795 (9%) IPR005225 (9%) IPR015760 (9%)" "Translational (tr)-type GTP-binding domain (9%) Small GTP-binding domain (9%) Translation initiation factor IF- 2 (9%)" VVADIAGVPAQINIAEVR root "GO:0006412 (19.9%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0022627 (19.9%) GO:0005840 (0.4%) GO:0015934 (0.1%)" "GO:0003735 (20%) GO:0019843 (20%) GO:0003729 (19.5%)" "translation (19.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (19.9%) ribosome (0.4%) large ribosomal subunit (0.1%)" "structural constituent of ribosome (20%) rRNA binding (20%) mRNA binding (19.5%)" "IPR004044 (11.2%) IPR009019 (11.2%) IPR015946 (11.2%)" "K Homology domain, type 2 (11.2%) K homology domain superfamily, prokaryotic type (11.2%) K homology domain-like, alpha/beta (11.2%)" MGDPETESVMLR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0009113 (20%) GO:0006189 (19.7%) GO:0006164 (0.4%)" "GO:0004637 (20%) GO:0005524 (20%) GO:0046872 (19.8%)" "purine nucleobase biosynthetic process (20%) 'de novo' IMP biosynthetic process (19.7%) purine nucleotide biosynthetic process (0.4%)" "phosphoribosylamine-glycine ligase activity (20%) ATP binding (20%) metal ion binding (19.8%)" "IPR000115 (11.2%) IPR020560 (11.2%) IPR020561 (11.2%)" "Phosphoribosylglycinamide synthetase (11.2%) Phosphoribosylglycinamide synthetase, C-domain (11.2%) Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (11.2%)" GQKVNPISNR root GO:0006412 (20.1%) "GO:0022627 (20.1%) GO:0005840 (0.3%) GO:0005739 (0.1%)" "GO:0003735 (20.1%) GO:0019843 (20.1%) GO:0003729 (19%)" translation (20.1%) "cytosolic small ribosomal subunit (20.1%) ribosome (0.3%) mitochondrion (0.1%)" "structural constituent of ribosome (20.1%) rRNA binding (20.1%) mRNA binding (19%)" "IPR009019 (11.2%) IPR001351 (11.2%) IPR015946 (11.2%)" "K homology domain superfamily, prokaryotic type (11.2%) Small ribosomal subunit protein uS3, C-terminal (11.2%) K homology domain-like, alpha/beta (11.2%)" LADKPLEMDPLFILGHWR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016740 (100%) transferase activity (100%) "IPR027417 (50%) IPR052736 (50%)" "P-loop containing nucleoside triphosphate hydrolase (50%) Omega-hydroxy-beta-dihydromenaquinone-9 sulfotransferase Stf3 (50%)" IEVEDFPAFILVDDKGNDFFK Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20.1%) GO:0005829 (0.1%) "GO:0004333 (20.5%) GO:0046872 (20.3%) GO:0051539 (20.3%)" tricarboxylic acid cycle (20.1%) cytosol (0.1%) "fumarate hydratase activity (20.5%) metal ion binding (20.3%) 4 iron, 4 sulfur cluster binding (20.3%)" "IPR004647 (17%) IPR036660 (17%) IPR051208 (17%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (17%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (17%) Class-I Fumarase/Tartrate Dehydratase (17%)" YYGGCEVVDQSETIAIER Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.4%) GO:0035999 (14.8%) GO:0032259 (10.5%)" GO:0005829 (15.4%) "GO:0004372 (15.4%) GO:0030170 (15.4%) GO:0008168 (10.5%)" "glycine biosynthetic process from serine (15.4%) tetrahydrofolate interconversion (14.8%) methylation (10.5%)" cytosol (15.4%) "glycine hydroxymethyltransferase activity (15.4%) pyridoxal phosphate binding (15.4%) methyltransferase activity (10.5%)" "IPR015421 (14.5%) IPR015424 (14.5%) IPR039429 (14.5%)" "Pyridoxal phosphate-dependent transferase, major domain (14.5%) Pyridoxal phosphate-dependent transferase (14.5%) Serine hydroxymethyltransferase-like domain (14.5%)" ASCYNAMPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (19.5%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%) GO:0008483 (0.7%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (19.5%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%) transaminase activity (0.7%)" "IPR000192 (20.1%) IPR022278 (20.1%) IPR015421 (19.9%)" "Aminotransferase class V domain (20.1%) Phosphoserine aminotransferase (20.1%) Pyridoxal phosphate-dependent transferase, major domain (19.9%)" ASDFVLAMGQGR root "5.2.1.8 (99.8%) 3.4.21.92 (0.2%)" "peptidylprolyl isomerase (99.8%) endopeptidase Clp (0.2%)" "GO:0051301 (12.5%) GO:0015031 (12.4%) GO:0043335 (12%)" "GO:0005737 (12.3%) GO:0005759 (0%) GO:0005829 (0%)" "GO:0003755 (12.5%) GO:0043022 (12%) GO:0044183 (12%)" "cell division (12.5%) protein transport (12.4%) protein unfolding (12%)" "cytoplasm (12.3%) mitochondrial matrix (0%) cytosol (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.5%) ribosome binding (12%) protein folding chaperone (12%)" "IPR001179 (12.7%) IPR046357 (12.6%) IPR005215 (12.6%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (12.7%) Peptidyl-prolyl cis-trans isomerase domain superfamily (12.6%) Trigger factor (12.6%)" DKIGHIIAAEVYQVWKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006353 (20%) GO:0031564 (20%)" GO:0005829 (20%) "GO:0003700 (20%) GO:0003723 (20%)" "DNA-templated transcription termination (20%) transcription antitermination (20%)" cytosol (20%) "DNA-binding transcription factor activity (20%) RNA binding (20%)" "IPR009019 (12.5%) IPR010213 (12.5%) IPR012340 (12.5%)" "K homology domain superfamily, prokaryotic type (12.5%) Transcription factor NusA (12.5%) Nucleic acid-binding, OB-fold (12.5%)" KQQELLQPIQQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" KYVADTDYVVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) GO:0033539 (33.1%) "GO:0009055 (33.1%) GO:0050660 (33.1%) GO:0016491 (0.6%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (33.1%) "electron transfer activity (33.1%) flavin adenine dinucleotide binding (33.1%) oxidoreductase activity (0.6%)" "IPR001308 (16.7%) IPR014729 (16.7%) IPR014730 (16.7%)" "Electron transfer flavoprotein alpha subunit/FixB (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.7%)" AKIDAVLKR root "3.1.7.2 (66.7%) 2.7.6.5 (33.3%)" "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase (66.7%) GTP diphosphokinase (33.3%)" GO:0015969 (31.3%) "GO:0005886 (31.3%) GO:0016020 (3.1%)" "GO:0016301 (9.4%) GO:0016787 (9.4%) GO:0008893 (6.3%)" guanosine tetraphosphate metabolic process (31.3%) "plasma membrane (31.3%) membrane (3.1%)" "kinase activity (9.4%) hydrolase activity (9.4%) guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity (6.3%)" "IPR002912 (9.2%) IPR003607 (9.2%) IPR004095 (9.2%)" "ACT domain (9.2%) HD/PDEase domain (9.2%) TGS (9.2%)" SLSGLLNLGGTILGTSR Bacteria Bacteria 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (8.3%) GO:0030388 (8.3%) GO:0061621 (8.3%)" "GO:0005945 (8.3%) GO:0016020 (0.2%)" "GO:0003872 (8.5%) GO:0046872 (8.5%) GO:0005524 (8.3%)" "fructose 6-phosphate metabolic process (8.3%) fructose 1,6-bisphosphate metabolic process (8.3%) canonical glycolysis (8.3%)" "6-phosphofructokinase complex (8.3%) membrane (0.2%)" "6-phosphofructokinase activity (8.5%) metal ion binding (8.5%) ATP binding (8.3%)" "IPR000023 (20.6%) IPR035966 (20.6%) IPR012003 (20.2%)" "Phosphofructokinase domain (20.6%) Phosphofructokinase superfamily (20.6%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (20.2%)" RGDINSPVLVGGGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20.2%) "GO:0005840 (20.2%) GO:1990904 (20.2%)" "GO:0003735 (20.2%) GO:0019843 (17.5%) GO:0003723 (1.9%)" translation (20.2%) "ribosome (20.2%) ribonucleoprotein complex (20.2%)" "structural constituent of ribosome (20.2%) rRNA binding (17.5%) RNA binding (1.9%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" EHGAVSIISAGWDPGSDSIVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0000166 (25%) GO:0047850 (25%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "nucleotide binding (25%) diaminopimelate dehydrogenase activity (25%)" "IPR000683 (25%) IPR010190 (25%) IPR032094 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Diaminopimelate dehydrogenase, Ddh (25%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25%)" KGCLETYCSATGVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (66%) GO:0004340 (34%)" "kinase activity (66%) glucokinase activity (34%)" "IPR000600 (33.4%) IPR049874 (33.4%) IPR043129 (33.1%)" "ROK family (33.4%) ROK, conserved site (33.4%) ATPase, nucleotide binding domain (33.1%)" ALVKLDGKPFLTFAAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" ELHTELSKDAIDYSVEEDYRTHYTPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005975 (32.3%) "GO:0004476 (33.9%) GO:0008270 (32.3%) GO:0046872 (1.6%)" carbohydrate metabolic process (32.3%) "mannose-6-phosphate isomerase activity (33.9%) zinc ion binding (32.3%) metal ion binding (1.6%)" "IPR011051 (16.9%) IPR014710 (16.9%) IPR049071 (16.9%)" "RmlC-like cupin domain superfamily (16.9%) RmlC-like jelly roll fold (16.9%) Mannose-6-phosphate isomerase, cupin domain (16.9%)" NKQTLQNIIDR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" AFGGALGGFTTGRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (14.1%) GO:0030148 (14.1%) GO:0006567 (0.1%)" "GO:0005829 (14.3%) GO:0016020 (14.1%)" "GO:0008890 (14.3%) GO:0030170 (14.3%) GO:0004758 (8.2%)" "L-threonine catabolic process to glycine (14.1%) sphingolipid biosynthetic process (14.1%) L-threonine catabolic process (0.1%)" "cytosol (14.3%) membrane (14.1%)" "glycine C-acetyltransferase activity (14.3%) pyridoxal phosphate binding (14.3%) serine C-palmitoyltransferase activity (8.2%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015424 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase (16.7%)" NGVIVVGHR root "GO:0006865 (33.2%) GO:0015813 (0%) GO:0070778 (0%)" "GO:0005576 (33.2%) GO:0030288 (33.2%) GO:0042597 (0.1%)" "GO:0016595 (0%) GO:0070335 (0%)" "amino acid transport (33.2%) L-glutamate transmembrane transport (0%) L-aspartate transmembrane transport (0%)" "extracellular region (33.2%) outer membrane-bounded periplasmic space (33.2%) periplasmic space (0.1%)" "glutamate binding (0%) aspartate binding (0%)" "IPR051455 (50.2%) IPR001638 (49.8%)" "Bacterial solute-binding protein 3 (50.2%) Solute-binding protein family 3/N-terminal domain of MltF (49.8%)" AFYDYLKGPQAAEIFKR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0015689 (19.9%) GO:0046687 (0.1%) GO:0070614 (0.1%)" "GO:0030288 (19.9%) GO:0016020 (0.1%) GO:0055052 (0.1%)" "GO:0030973 (19.9%) GO:0046872 (19.7%) GO:1901359 (19.7%)" "molybdate ion transport (19.9%) response to chromate (0.1%) tungstate ion transport (0.1%)" "outer membrane-bounded periplasmic space (19.9%) membrane (0.1%) ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing (0.1%)" "molybdate ion binding (19.9%) metal ion binding (19.7%) tungstate binding (19.7%)" "IPR005950 (50%) IPR050682 (50%)" "Molybdate ABC transporter, substrate-binding protein (50%) Molybdate-binding protein ModA/tungstate-binding (50%)" GGIAAFIDAEHAFDR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006281 (12.8%) GO:0006310 (12.8%) GO:0009432 (11.7%)" "GO:0005829 (12.8%) GO:0005737 (0%)" "GO:0003697 (12.8%) GO:0005524 (12.8%) GO:0140664 (12.8%)" "DNA repair (12.8%) DNA recombination (12.8%) SOS response (11.7%)" "cytosol (12.8%) cytoplasm (0%)" "single-stranded DNA binding (12.8%) ATP binding (12.8%) ATP-dependent DNA damage sensor activity (12.8%)" "IPR013765 (11.4%) IPR049428 (11.4%) IPR020588 (11.4%)" "DNA recombination and repair protein RecA (11.4%) RecA-like, N-terminal (11.4%) DNA recombination and repair protein RecA-like, ATP-binding domain (11.4%)" ENANMNADTPAGMMMK Bacteria Bacteria "1.17.4.2 (99.4%) 1.1.98.6 (0.6%)" "ribonucleoside-triphosphate reductase (thioredoxin) (99.4%) ribonucleoside-triphosphate reductase (formate) (0.6%)" "GO:0006260 (16.7%) GO:0009265 (16.7%)" GO:0031250 (16.7%) "GO:0004748 (16.7%) GO:0008998 (16.7%) GO:0005524 (16.5%)" "DNA replication (16.7%) 2'-deoxyribonucleotide biosynthetic process (16.7%)" anaerobic ribonucleoside-triphosphate reductase complex (16.7%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.7%) ribonucleoside-triphosphate reductase (thioredoxin) activity (16.7%) ATP binding (16.5%)" "IPR012833 (50.2%) IPR005144 (49.8%)" "Ribonucleoside-triphosphate reductase, anaerobic (50.2%) ATP-cone domain (49.8%)" AISPTFGGINLEDIKAPECFEIETR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (17.1%) "GO:0016746 (17.8%) GO:0046872 (17.8%) GO:0051287 (17.8%)" malate metabolic process (17.1%) "acyltransferase activity (17.8%) metal ion binding (17.8%) NAD binding (17.8%)" "IPR002505 (9.1%) IPR012301 (9.1%) IPR012302 (9.1%)" "Phosphate acetyl/butaryl transferase (9.1%) Malic enzyme, N-terminal domain (9.1%) Malic enzyme, NAD-binding (9.1%)" KYEIPTVASLNTIMVDGTGMCGACR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 1.18.1.2 (100%) ferredoxin--NADP(+) reductase (100%) GO:0006221 (20%) "GO:0046872 (20%) GO:0050660 (20%) GO:0051537 (20%)" pyrimidine nucleotide biosynthetic process (20%) "metal ion binding (20%) flavin adenine dinucleotide binding (20%) 2 iron, 2 sulfur cluster binding (20%)" "IPR019480 (16.9%) IPR039261 (16.9%) IPR050353 (16.9%)" "Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain (16.9%) Ferredoxin-NADP reductase (FNR), nucleotide-binding domain (16.9%) Dihydroorotate dehydrogenase B electron transfer subunit (16.9%)" IIIEAEGVPYEVAKEALR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) GO:0022625 (20%) "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) cytosolic large ribosomal subunit (20%) "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000114 (20%) IPR016180 (20%) IPR020798 (20%)" "Large ribosomal subunit protein uL16, bacteria (20%) Large ribosomal subunit protein uL16 domain (20%) Large ribosomal subunit protein uL16, conserved site (20%)" AVLVGLVTPEQNEQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005737 (20%) "GO:0003924 (20%) GO:0005525 (20%) GO:0043022 (20%)" cytoplasm (20%) "GTPase activity (20%) GTP binding (20%) ribosome binding (20%)" "IPR006073 (13.9%) IPR016496 (13.9%) IPR025121 (13.9%)" "GTP binding domain (13.9%) GTPase HflX (13.9%) GTPase HflX, N-terminal (13.9%)" FGEAIFGADKVLSKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" VEMSPYDLSK Bacteria Bacteria GO:0005829 (25%) "GO:0003743 (25.1%) GO:0043022 (25%) GO:0019843 (24%)" cytosol (25%) "translation initiation factor activity (25.1%) ribosome binding (25%) rRNA binding (24%)" "IPR004368 (25.8%) IPR006196 (25.8%) IPR012340 (25.8%)" "Translation initiation factor IF-1 (25.8%) RNA-binding domain, S1, IF1 type (25.8%) Nucleic acid-binding, OB-fold (25.8%)" VITGEEIGTLVHN Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.4.22 (100%) UMP kinase (100%) "GO:0006225 (20%) GO:0044210 (20%)" GO:0005737 (20%) "GO:0005524 (20%) GO:0033862 (20%)" "UDP biosynthetic process (20%) 'de novo' CTP biosynthetic process (20%)" cytoplasm (20%) "ATP binding (20%) UMP kinase activity (20%)" "IPR001048 (25%) IPR011817 (25%) IPR015963 (25%)" "Aspartate/glutamate/uridylate kinase (25%) Uridylate kinase (25%) Uridylate kinase, bacteria (25%)" YTGYPGGQIEYTPADLLKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006412 (20%) GO:0017148 (20%)" GO:0022625 (20%) "GO:0003729 (20%) GO:0003735 (20%)" "translation (20%) negative regulation of translation (20%)" cytosolic large ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%)" "IPR005822 (25%) IPR005823 (25%) IPR023563 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13, conserved site (25%)" MKQELEPGMVFALEPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.4.13.9 (69.2%) 3.4.-.- (15.4%) 3.4.11.- (15.4%)" "Xaa-Pro dipeptidase (69.2%) Acting on peptide bonds (peptidases) (15.4%) Aminopeptidases (15.4%)" "GO:0004177 (41.6%) GO:0008235 (26.1%) GO:0046914 (26.1%)" "aminopeptidase activity (41.6%) metalloexopeptidase activity (26.1%) transition metal ion binding (26.1%)" "IPR000994 (18.5%) IPR036005 (18.5%) IPR050659 (18.5%)" "Peptidase M24 (18.5%) Creatinase/aminopeptidase-like (18.5%) Peptidase M24B family (18.5%)" TAKDFVLYTVDENGNPIPNKDNPGEIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (46.9%) IPR024302 (46.9%) IPR041662 (6.3%)" "Tetratricopeptide-like helical domain superfamily (46.9%) SusD-like (46.9%) SusD-like 2 (6.3%)" GIHPENYRPVVFKDMSNDDVFITR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR002150 (25%) IPR027493 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL31 type A/B (25%) Large ribosomal subunit protein bL31 type B (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" VNHKLEVPSDEANLDGLNFLAGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20.1%) IPR018189 (20.1%) IPR035476 (20.1%)" "Phosphoglucose isomerase (PGI) (20.1%) Phosphoglucose isomerase, conserved site (20.1%) Phosphoglucose isomerase, SIS domain 1 (20.1%)" EHELMEQEELESK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.3%) IPR000795 (8.3%) IPR004161 (8.3%)" "Translation initiation factor IF-2, bacterial-like (8.3%) Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" GACGGCFNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" ANVLVFPTLEVGNIAYK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0016407 (72%) GO:0008959 (28%)" "acetyltransferase activity (72%) phosphate acetyltransferase activity (28%)" "IPR002505 (16.7%) IPR004614 (16.7%) IPR012147 (16.7%)" "Phosphate acetyl/butaryl transferase (16.7%) Phosphate acetyltransferase (16.7%) Phosphate acetyl/butyryltransferase (16.7%)" YSPDSAVKDKANEIINYLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.4%) GO:0006044 (32.4%)" "GO:0004342 (32.4%) GO:0016853 (2.9%)" "carbohydrate metabolic process (32.4%) N-acetylglucosamine metabolic process (32.4%)" "glucosamine-6-phosphate deaminase activity (32.4%) isomerase activity (2.9%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" TGPSEANLNK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.24.55 (100%) pitrilysin (100%) GO:0006508 (33.3%) "GO:0004222 (33.3%) GO:0046872 (33.3%)" proteolysis (33.3%) "metalloendopeptidase activity (33.3%) metal ion binding (33.3%)" "IPR001431 (20%) IPR007863 (20%) IPR011249 (20%)" "Peptidase M16, zinc-binding site (20%) Peptidase M16, C-terminal (20%) Metalloenzyme, LuxS/M16 peptidase-like (20%)" STQVGYANGNIANPTYQQVCTGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "1.8.4.11 (50%) 1.8.4.12 (50%)" "peptide-methionine (S)-S-oxide reductase (50%) peptide-methionine (R)-S-oxide reductase (50%)" "GO:0006979 (17.8%) GO:0030091 (17.8%)" GO:0005737 (17.8%) "GO:0008113 (17.8%) GO:0033743 (17.8%) GO:0033744 (10.9%)" "response to oxidative stress (17.8%) protein repair (17.8%)" cytoplasm (17.8%) "peptide-methionine (S)-S-oxide reductase activity (17.8%) peptide-methionine (R)-S-oxide reductase activity (17.8%) L-methionine (S)-S-oxide reductase activity (10.9%)" "IPR002569 (20%) IPR002579 (20%) IPR011057 (20%)" "Peptide methionine sulphoxide reductase MsrA domain (20%) Peptide methionine sulphoxide reductase MrsB domain (20%) Mss4-like superfamily (20%)" AANIVMLGAAAPFIGIEYDKIAEGIR LVQSGGVSFNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.9%) GO:0005829 (16.9%) "GO:0003723 (16.9%) GO:0004831 (16.9%) GO:0005524 (16.9%)" tyrosyl-tRNA aminoacylation (16.9%) cytosol (16.9%) "RNA binding (16.9%) tyrosine-tRNA ligase activity (16.9%) ATP binding (16.9%)" "IPR001412 (12.5%) IPR002305 (12.5%) IPR002307 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Aminoacyl-tRNA synthetase, class Ic (12.5%) Tyrosine-tRNA ligase (12.5%)" SPVNLAQYVVENDNQIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR032573 (100%) Protein of unknown function DUF4925 (100%) HQKPVPALNQPGGIVEK root "GO:0006412 (16.7%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (17%) GO:1990904 (16.6%) GO:0005829 (16%)" "GO:0003735 (16.7%) GO:0019843 (16.6%) GO:0000049 (0%)" "translation (16.7%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (17%) ribonucleoprotein complex (16.6%) cytosol (16%)" "structural constituent of ribosome (16.7%) rRNA binding (16.6%) tRNA binding (0%)" "IPR003256 (14.5%) IPR008991 (14.5%) IPR014722 (14.5%)" "Large ribosomal subunit protein uL24 (14.5%) Translation protein SH3-like domain superfamily (14.5%) Large ribosomal subunit protein uL2, domain 2 (14.5%)" AVITGDVTQIDLPR root 3.1.-.- (100%) Acting on ester bonds (100%) GO:0006364 (0.1%) "GO:0005829 (45.2%) GO:0005737 (0.1%) GO:0005739 (0%)" "GO:0005524 (45.3%) GO:0016787 (7.2%) GO:0003723 (1.8%)" rRNA processing (0.1%) "cytosol (45.2%) cytoplasm (0.1%) mitochondrion (0%)" "ATP binding (45.3%) hydrolase activity (7.2%) RNA binding (1.8%)" "IPR003714 (32.8%) IPR051451 (32.7%) IPR027417 (32.7%)" "PhoH-like protein (32.8%) PhoH2-like (32.7%) P-loop containing nucleoside triphosphate hydrolase (32.7%)" LGMMTTVSGVEMSR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0030490 (32.4%) GO:0006364 (0.8%) GO:0042254 (0.2%)" "GO:0005829 (33%) GO:0005737 (0.1%)" "GO:0043024 (33%) GO:0003723 (0.1%) GO:0160148 (0.1%)" "maturation of SSU-rRNA (32.4%) rRNA processing (0.8%) ribosome biogenesis (0.2%)" "cytosol (33%) cytoplasm (0.1%)" "ribosomal small subunit binding (33%) RNA binding (0.1%) tRNA pseudouridine(55) synthase activity (0.1%)" "IPR000238 (25.1%) IPR015946 (25%) IPR023799 (25%)" "Ribosome-binding factor A (25.1%) K homology domain-like, alpha/beta (25%) Ribosome-binding factor A domain superfamily (25%)" ALMILMKDDLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.262 (100%) 4-hydroxythreonine-4-phosphate dehydrogenase (100%) "GO:0046872 (33.3%) GO:0051287 (33.3%) GO:0050570 (17.5%)" "metal ion binding (33.3%) NAD binding (33.3%) 4-hydroxythreonine-4-phosphate dehydrogenase activity (17.5%)" IPR005255 (100%) PdxA family (100%) EAKDLVESAPAALK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006412 (24.8%) GO:0002181 (0%) GO:0006351 (0%)" "GO:0022625 (24.8%) GO:0005840 (0.3%) GO:0005829 (0.1%)" "GO:0003735 (24.8%) GO:0003729 (24.8%) GO:0003677 (0%)" "translation (24.8%) cytoplasmic translation (0%) DNA-templated transcription (0%)" "cytosolic large ribosomal subunit (24.8%) ribosome (0.3%) cytosol (0.1%)" "structural constituent of ribosome (24.8%) mRNA binding (24.8%) DNA binding (0%)" "IPR000206 (19.9%) IPR013823 (19.9%) IPR014719 (19.9%)" "Large ribosomal subunit protein bL12 (19.9%) Large ribosomal subunit protein bL12, C-terminal (19.9%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (19.9%)" VADMSLAEFGR root "3.13.2.1 (85.4%) 3.3.1.1 (12.2%) 2.7.2.3 (2.4%)" "adenosylhomocysteinase (85.4%) Transferred entry: 3.13.2.1 (12.2%) phosphoglycerate kinase (2.4%)" "GO:0033353 (20.7%) GO:0006730 (20.1%) GO:0071269 (13.4%)" "GO:0005829 (21.2%) GO:0016020 (0.6%)" "GO:0004013 (20.7%) GO:0004618 (0.6%) GO:0005524 (0.6%)" "S-adenosylmethionine cycle (20.7%) one-carbon metabolic process (20.1%) L-homocysteine biosynthetic process (13.4%)" "cytosol (21.2%) membrane (0.6%)" "adenosylhomocysteinase activity (20.7%) phosphoglycerate kinase activity (0.6%) ATP binding (0.6%)" "IPR000043 (20.2%) IPR042172 (20.2%) IPR015878 (19.1%)" "Adenosylhomocysteinase-like (20.2%) Adenosylhomocysteinase-like superfamily (20.2%) S-adenosyl-L-homocysteine hydrolase, NAD binding domain (19.1%)" AGMPLSDGATTPSDILAIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) GO:0000428 (16.9%) "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (15.7%)" DNA-templated transcription (16.9%) DNA-directed RNA polymerase complex (16.9%) "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (15.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" LLDEGRAGENVGVLLR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0%) GO:0046677 (0%) GO:0032790 (0%)" "GO:0005829 (17.9%) GO:0032045 (9.2%) GO:0005886 (0.7%)" "GO:0003746 (18.2%) GO:0005525 (18%) GO:0003924 (12.9%)" "translational elongation (0%) response to antibiotic (0%) ribosome disassembly (0%)" "cytosol (17.9%) guanyl-nucleotide exchange factor complex (9.2%) plasma membrane (0.7%)" "translation elongation factor activity (18.2%) GTP binding (18%) GTPase activity (12.9%)" "IPR009000 (10.7%) IPR050055 (10.7%) IPR004161 (10.6%)" "Translation protein, beta-barrel domain superfamily (10.7%) Elongation factor Tu GTPase (10.7%) Translation elongation factor EFTu-like, domain 2 (10.6%)" GVKLDNELEVEDLKELVKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25.1%) GO:0016301 (25.1%) GO:0050242 (25.1%)" "ATP binding (25.1%) kinase activity (25.1%) pyruvate, phosphate dikinase activity (25.1%)" "IPR002192 (10.1%) IPR010121 (10.1%) IPR013815 (10.1%)" "Pyruvate phosphate dikinase, AMP/ATP-binding (10.1%) Pyruvate, phosphate dikinase (10.1%) ATP-grasp fold, subdomain 1 (10.1%)" DNSELYASLPEGVAR DINPVKDELEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.5.1.4 (100%) inositol-3-phosphate synthase (100%) "GO:0006021 (31.8%) GO:0008654 (31.8%)" GO:0016020 (4.7%) GO:0004512 (31.8%) "inositol biosynthetic process (31.8%) phospholipid biosynthetic process (31.8%)" membrane (4.7%) inositol-3-phosphate synthase activity (31.8%) "IPR002587 (33.3%) IPR013021 (33.3%) IPR036291 (33.3%)" "Myo-inositol-1-phosphate synthase (33.3%) Myo-inositol-1-phosphate synthase, GAPDH-like (33.3%) NAD(P)-binding domain superfamily (33.3%)" EGYEQIAAIFTETADQEKEHAKR Pseudomonadati Bacteria Pseudomonadati "1.11.1.1 (50%) 1.14.13.81 (50%)" "NADH peroxidase (50%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (50%)" "GO:0005506 (50%) GO:0016491 (49.4%) GO:0048529 (0.6%)" "iron ion binding (50%) oxidoreductase activity (49.4%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity (0.6%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" VNSDVLTVSTVNSQDQVTQKPLRDSVK Bacteria Bacteria "GO:0045893 (30.7%) GO:0006355 (0.4%) GO:0006351 (0.1%)" "GO:0000786 (0.1%) GO:0005829 (0.1%) GO:0009295 (0.1%)" "GO:0043565 (33.9%) GO:0003700 (33%) GO:0003677 (0.5%)" "positive regulation of DNA-templated transcription (30.7%) regulation of DNA-templated transcription (0.4%) DNA-templated transcription (0.1%)" "nucleosome (0.1%) cytosol (0.1%) nucleoid (0.1%)" "sequence-specific DNA binding (33.9%) DNA-binding transcription factor activity (33%) DNA binding (0.5%)" "IPR005412 (25.1%) IPR050207 (25.1%) IPR009057 (25%)" "DNA-binding protein Fis (25.1%) Transcriptional regulatory Fis (25.1%) Homedomain-like superfamily (25%)" VNDSATTGTADR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) IPR014941 (100%) Fimbrium subunit FimB/Mfa2/Mfa3 (100%) EIVPGKDLDAPICSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR012912 (50%) IPR024047 (50%)" "Plasmid pRiA4b, Orf3-like domain (50%) MM3350-like superfamily (50%)" GEVVLGDEFSPDGSR root "6.3.2.6 (99.9%) 4.3.3.7 (0.1%)" "phosphoribosylaminoimidazolesuccinocarboxamide synthase (99.9%) 4-hydroxy-tetrahydrodipicolinate synthase (0.1%)" "GO:0006189 (20.1%) GO:0009236 (19.4%) GO:0006164 (0.1%)" "GO:0005829 (19.7%) GO:0016020 (0.1%) GO:0005737 (0%)" "GO:0004639 (20.2%) GO:0005524 (20.2%) GO:0016874 (0.2%)" "'de novo' IMP biosynthetic process (20.1%) cobalamin biosynthetic process (19.4%) purine nucleotide biosynthetic process (0.1%)" "cytosol (19.7%) membrane (0.1%) cytoplasm (0%)" "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (20.2%) ATP binding (20.2%) ligase activity (0.2%)" "IPR028923 (20.3%) IPR018236 (20.3%) IPR050089 (19.9%)" "SAICAR synthetase/ADE2, N-terminal (20.3%) SAICAR synthetase, conserved site (20.3%) SAICAR synthetase (19.9%)" TQNQLIEFDMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0000166 (25%) GO:0047850 (25%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "nucleotide binding (25%) diaminopimelate dehydrogenase activity (25%)" "IPR000683 (25%) IPR010190 (25%) IPR032094 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Diaminopimelate dehydrogenase, Ddh (25%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25%)" GNTLSQDMVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (17.3%) "GO:0016746 (17.3%) GO:0046872 (17.3%) GO:0051287 (17.3%)" malate metabolic process (17.3%) "acyltransferase activity (17.3%) metal ion binding (17.3%) NAD binding (17.3%)" "IPR002505 (9.1%) IPR012188 (9.1%) IPR012301 (9.1%)" "Phosphate acetyl/butaryl transferase (9.1%) NAD(P)-dependent malic enzyme (9.1%) Malic enzyme, N-terminal domain (9.1%)" RNVAVVGCSVDSQFSHFAWLNQDKNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" MAEDHEADLVEISPNAVPPVCR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0032790 (20%) "GO:0005829 (20%) GO:0016020 (20%)" "GO:0003743 (20%) GO:0043022 (20%)" ribosome disassembly (20%) "cytosol (20%) membrane (20%)" "translation initiation factor activity (20%) ribosome binding (20%)" "IPR001288 (17%) IPR019813 (17%) IPR019814 (17%)" "Translation initiation factor 3 (17%) Translation initiation factor 3, conserved site (17%) Translation initiation factor 3, N-terminal (17%)" NSLTLPKEEVDALIADGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004818 (16.7%) GO:0005524 (16.7%)" glutamyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR000924 (10%) IPR001412 (10%) IPR004527 (10%)" "Glutamyl/glutaminyl-tRNA synthetase (10%) Aminoacyl-tRNA synthetase, class I, conserved site (10%) Glutamate-tRNA ligase, bacterial/mitochondrial (10%)" KVIVFSPHPDDDVISMGGTLRR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "3.5.99.6 (96.6%) 3.1.1.31 (3.4%)" "glucosamine-6-phosphate deaminase (96.6%) 6-phosphogluconolactonase (3.4%)" "GO:0005975 (32.4%) GO:0006044 (31.9%) GO:0006046 (0.5%)" "GO:0004342 (32.4%) GO:0016853 (1.6%) GO:0016787 (1.1%)" "carbohydrate metabolic process (32.4%) N-acetylglucosamine metabolic process (31.9%) N-acetylglucosamine catabolic process (0.5%)" "glucosamine-6-phosphate deaminase activity (32.4%) isomerase activity (1.6%) hydrolase activity (1.1%)" "IPR003737 (17.3%) IPR052960 (17.3%) IPR024078 (16.5%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (17.3%) Glucosamine-6-phosphate deaminase-like (17.3%) Putative deacetylase LmbE-like domain superfamily (16.5%)" FLDTMPDMEGQLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.- (100%) Phosphotransferases with an alcohol group as acceptor (100%) GO:0016301 (100%) kinase activity (100%) "IPR002173 (25%) IPR011611 (25%) IPR029056 (25%)" "Carbohydrate/purine kinase, PfkB, conserved site (25%) Carbohydrate kinase PfkB (25%) Ribokinase-like (25%)" NALDKIPLDADLR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:1902626 (24.2%) GO:0042254 (1.1%)" GO:0005829 (25.3%) "GO:0019843 (25.3%) GO:0043022 (24.1%) GO:0043023 (0.1%)" "assembly of large subunit precursor of preribosome (24.2%) ribosome biogenesis (1.1%)" cytosol (25.3%) "rRNA binding (25.3%) ribosome binding (24.1%) ribosomal large subunit binding (0.1%)" "IPR006839 (50%) IPR023153 (50%)" "Dual-action ribosomal maturation protein DarP (50%) Dual-action ribosomal maturation protein DarP superfamily (50%)" SLDEGQAVSYDVEQSDRGPQAANVTKL Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus "GO:0010468 (25%) GO:0051252 (25%)" GO:0005737 (25%) "GO:0003676 (22.9%) GO:0003677 (2.1%)" "regulation of gene expression (25%) regulation of RNA metabolic process (25%)" cytoplasm (25%) "nucleic acid binding (22.9%) DNA binding (2.1%)" "IPR002059 (16.7%) IPR011129 (16.7%) IPR012156 (16.7%)" "Cold-shock protein Csp, DNA-binding (16.7%) Cold-shock domain (16.7%) Cold shock, CspA (16.7%)" ALAQLPDSCAASADCLQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" VVVMGGDNYR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (18.5%) GO:0006164 (1.8%)" GO:0005737 (20.3%) "GO:0004642 (20.3%) GO:0005524 (19.5%) GO:0046872 (19.5%)" "'de novo' IMP biosynthetic process (18.5%) purine nucleotide biosynthetic process (1.8%)" cytoplasm (20.3%) "phosphoribosylformylglycinamidine synthase activity (20.3%) ATP binding (19.5%) metal ion binding (19.5%)" "IPR010918 (11.5%) IPR036676 (11.5%) IPR036921 (11.5%)" "PurM-like, C-terminal domain (11.5%) PurM-like, C-terminal domain superfamily (11.5%) PurM-like, N-terminal domain superfamily (11.5%)" FSAAELVGALAGIAELPR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae IPR009444 (100%) Conjugal transfer, TraD, alpha-type (100%) IVEISQRPEFLGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25.3%) IPR011834 (25.3%) IPR052182 (25.3%)" "Glycosyl transferase, family 35 (25.3%) Alpha-glucan phosphorylase (25.3%) Glycogen_Maltodextrin_Phosphorylase (25.3%)" ISVAEYNAACRK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.4%) GO:0005737 (14.1%) "GO:0004822 (14.5%) GO:0005524 (14.5%) GO:0002161 (14.3%)" isoleucyl-tRNA aminoacylation (14.4%) cytoplasm (14.1%) "isoleucine-tRNA ligase activity (14.5%) ATP binding (14.5%) aminoacyl-tRNA deacylase activity (14.3%)" "IPR002300 (12.7%) IPR023586 (12.7%) IPR002301 (12.6%)" "Aminoacyl-tRNA synthetase, class Ia (12.7%) Isoleucine-tRNA ligase, type 2 (12.7%) Isoleucine-tRNA ligase (12.6%)" HGGGAFSGKDPTKVDR root "2.5.1.6 (100%) 2.1.1.33 (0%) 2.7.8.8 (0%)" "methionine adenosyltransferase (100%) tRNA (guanine(46)-N(7))-methyltransferase (0%) CDP-diacylglycerol--serine O-phosphatidyltransferase (0%)" "GO:0006556 (16.8%) GO:0006730 (16.8%) GO:0009860 (0%)" "GO:0005737 (14.9%) GO:0005829 (0.5%) GO:0016020 (0.1%)" "GO:0004478 (16.8%) GO:0005524 (16.8%) GO:0000287 (9.1%)" "S-adenosylmethionine biosynthetic process (16.8%) one-carbon metabolic process (16.8%) pollen tube growth (0%)" "cytoplasm (14.9%) cytosol (0.5%) membrane (0.1%)" "methionine adenosyltransferase activity (16.8%) ATP binding (16.8%) magnesium ion binding (9.1%)" "IPR022630 (16.8%) IPR022631 (16.8%) IPR002133 (16.8%)" "S-adenosylmethionine synthetase, C-terminal (16.8%) S-adenosylmethionine synthetase, conserved site (16.8%) S-adenosylmethionine synthetase (16.8%)" DSNNPQLYDVMGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" SSVNEVYSLIKDDLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" VLTKEDIIEIIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.7%) GO:0006508 (0.6%)" GO:0000428 (19.8%) "GO:0003677 (19.7%) GO:0003899 (19.7%) GO:0032549 (19.7%)" "DNA-templated transcription (19.7%) proteolysis (0.6%)" DNA-directed RNA polymerase complex (19.8%) "DNA binding (19.7%) DNA-directed RNA polymerase activity (19.7%) ribonucleoside binding (19.7%)" "IPR007642 (7.9%) IPR015712 (7.9%) IPR007644 (7.8%)" "RNA polymerase Rpb2, domain 2 (7.9%) DNA-directed RNA polymerase, subunit 2 (7.9%) RNA polymerase, beta subunit, protrusion (7.8%)" GEGAMDAANILKPALAR root "GO:0034605 (18.1%) GO:0042026 (17.6%) GO:0006508 (4.6%)" "GO:0005737 (18.1%) GO:0016020 (0%)" "GO:0005524 (18.1%) GO:0016887 (18.1%) GO:0008233 (4.6%)" "cellular response to heat (18.1%) protein refolding (17.6%) proteolysis (4.6%)" "cytoplasm (18.1%) membrane (0%)" "ATP binding (18.1%) ATP hydrolysis activity (18.1%) peptidase activity (4.6%)" "IPR018368 (8.3%) IPR050130 (8.3%) IPR003959 (8.3%)" "ClpA/B, conserved site 1 (8.3%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.3%) ATPase, AAA-type, core (8.3%)" EASATTANNFTPVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0007154 (50%) GO:0016020 (50%) cell communication (50%) membrane (50%) "IPR003644 (33.3%) IPR038081 (33.3%) IPR011047 (19.5%)" "Na-Ca exchanger/integrin-beta4 (33.3%) CalX-like domain superfamily (33.3%) Quinoprotein alcohol dehydrogenase-like superfamily (19.5%)" NNEIKVEQADVMNMAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.4%) GO:0043335 (16.4%) GO:0051083 (16.4%)" "GO:0003755 (16.4%) GO:0043022 (16.4%) GO:0044183 (16.4%)" "protein transport (16.4%) protein unfolding (16.4%) 'de novo' cotranslational protein folding (16.4%)" "peptidyl-prolyl cis-trans isomerase activity (16.4%) ribosome binding (16.4%) protein folding chaperone (16.4%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" IFTPGDHCHVLVAMNPAALK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.2.-.- (100%) Acting on the aldehyde or oxo group of donors (100%) GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.6%) IPR002880 (12.6%) IPR009014 (12.6%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.6%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.6%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.6%)" VSEGKGDFGYNAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" FALTDESSASDIFKEYCLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.13.12.- (33.3%) 1.13.12.16 (33.3%) 5.3.1.16 (33.3%)" "With incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) (33.3%) nitronate monooxygenase (33.3%) 1-(5-phosphoribosyl)-5[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamidisomerase (33.3%)" "GO:0018580 (75%) GO:0051213 (17.9%) GO:0004497 (3.6%)" "nitronate monooxygenase activity (75%) dioxygenase activity (17.9%) monooxygenase activity (3.6%)" "IPR004136 (50%) IPR013785 (50%)" "Nitronate monooxygenase (50%) Aldolase-type TIM barrel (50%)" TSHEIQKIEMLENEDLAGLIDQQALAEFR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.1 (60%) 1.2.1.51 (20%) 1.2.7.- (20%)" "pyruvate synthase (60%) pyruvate dehydrogenase (NADP(+)) (20%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (11.3%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (11.3%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" ATIGQVGNIEHGNVVIGK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0002181 (20%) GO:0015934 (20%) "GO:0003735 (20%) GO:0016740 (20%) GO:0019843 (20%)" cytoplasmic translation (20%) large ribosomal subunit (20%) "structural constituent of ribosome (20%) transferase activity (20%) rRNA binding (20%)" "IPR002171 (11.1%) IPR005880 (11.1%) IPR008991 (11.1%)" "Large ribosomal subunit protein uL2 (11.1%) Large ribosomal subunit protein uL2, bacteria/organella (11.1%) Translation protein SH3-like domain superfamily (11.1%)" GAVQGIAELITRPGLMNVDFADVR root 3.4.24.- (100%) Metalloendopeptidases (100%) "GO:0000917 (14%) GO:0043093 (13.7%) GO:0051258 (13.7%)" "GO:0005737 (14.5%) GO:0032153 (14.5%) GO:0005886 (0%)" "GO:0003924 (14.5%) GO:0005525 (14.5%) GO:0016787 (0%)" "division septum assembly (14%) FtsZ-dependent cytokinesis (13.7%) protein polymerization (13.7%)" "cytoplasm (14.5%) cell division site (14.5%) plasma membrane (0%)" "GTPase activity (14.5%) GTP binding (14.5%) hydrolase activity (0%)" "IPR045061 (11.3%) IPR003008 (11.2%) IPR008280 (11.2%)" "Tubulin-like protein FtsZ/CetZ (11.3%) Tubulin/FtsZ, GTPase domain (11.2%) Tubulin/FtsZ, C-terminal (11.2%)" YVNAGEDKGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20.1%) "GO:0005840 (19.7%) GO:1990904 (19.7%) GO:0022625 (0.3%)" "GO:0003735 (20.1%) GO:0019843 (20.1%)" translation (20.1%) "ribosome (19.7%) ribonucleoprotein complex (19.7%) cytosolic large ribosomal subunit (0.3%)" "structural constituent of ribosome (20.1%) rRNA binding (20.1%)" "IPR003256 (16.8%) IPR005824 (16.8%) IPR008991 (16.8%)" "Large ribosomal subunit protein uL24 (16.8%) KOW (16.8%) Translation protein SH3-like domain superfamily (16.8%)" LHCAPHGNFSHNPEPIPENLTEISDLMGHAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "5.4.2.10 (71.4%) 5.4.2.2 (28.6%)" "phosphoglucosamine mutase (71.4%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (28.6%)" "GO:0005975 (13.7%) GO:0006048 (13.7%) GO:0009252 (13.7%)" GO:0005829 (13.7%) "GO:0000287 (13.7%) GO:0004615 (13.7%) GO:0008966 (13.7%)" "carbohydrate metabolic process (13.7%) UDP-N-acetylglucosamine biosynthetic process (13.7%) peptidoglycan biosynthetic process (13.7%)" cytosol (13.7%) "magnesium ion binding (13.7%) phosphomannomutase activity (13.7%) phosphoglucosamine mutase activity (13.7%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" EVGYMYGMYKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.4.1.4 (85.7%) 1.4.1.2 (14.3%)" "glutamate dehydrogenase (NADP(+)) (85.7%) glutamate dehydrogenase (14.3%)" GO:0006537 (25.2%) "GO:0005829 (24.8%) GO:0009986 (0.4%)" "GO:0004354 (25.2%) GO:0000166 (23.9%) GO:0004352 (0.4%)" glutamate biosynthetic process (25.2%) "cytosol (24.8%) cell surface (0.4%)" "glutamate dehydrogenase (NADP+) activity (25.2%) nucleotide binding (23.9%) glutamate dehydrogenase (NAD+) activity (0.4%)" "IPR006095 (11.9%) IPR006096 (11.9%) IPR006097 (11.9%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.9%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.9%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.9%)" DGSVVVLGYTDR root "GO:0034220 (18.1%) GO:0006811 (6.7%) GO:0006974 (0.1%)" "GO:0046930 (24.8%) GO:0009279 (24.7%) GO:0019867 (0.2%)" "GO:0015288 (24.8%) GO:0015075 (0.1%) GO:0042802 (0.1%)" "monoatomic ion transmembrane transport (18.1%) monoatomic ion transport (6.7%) DNA damage response (0.1%)" "pore complex (24.8%) cell outer membrane (24.7%) outer membrane (0.2%)" "porin activity (24.8%) monoatomic ion transmembrane transporter activity (0.1%) identical protein binding (0.1%)" "IPR002368 (13%) IPR006664 (13%) IPR006665 (13%)" "Outer membrane protein, OmpA (13%) Outer membrane protein, bacterial (13%) OmpA-like domain (13%)" LNAPVSEEAIEGVDKYWR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae "4.1.2.- (51.4%) 4.1.2.22 (32.4%) 4.1.2.9 (16.2%)" "Aldehyde-lyases (51.4%) fructose-6-phosphate phosphoketolase (32.4%) phosphoketolase (16.2%)" GO:0005975 (32.5%) "GO:0000287 (32.1%) GO:0016832 (26.4%) GO:0047905 (5.7%)" carbohydrate metabolic process (32.5%) "magnesium ion binding (32.1%) aldehyde-lyase activity (26.4%) fructose-6-phosphate phosphoketolase activity (5.7%)" "IPR005593 (13.8%) IPR018969 (13.8%) IPR018970 (13.8%)" "Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase (13.8%) Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal (13.8%) Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal (13.8%)" LFVHHIQNAESGAVVEFDK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR001787 (33.3%) IPR028909 (33.3%) IPR036164 (33.3%)" "Large ribosomal subunit protein bL21 (33.3%) Large ribosomal subunit protein bL21-like (33.3%) Large ribosomal subunit protein bL21-like superfamily (33.3%)" LMNVVGEAVDGMRPLSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0005886 (23%) GO:0045259 (23%)" "GO:0005524 (23%) GO:0046933 (23%) GO:0016787 (6.6%)" "plasma membrane (23%) proton-transporting ATP synthase complex (23%)" "ATP binding (23%) proton-transporting ATP synthase activity, rotational mechanism (23%) hydrolase activity (6.6%)" "IPR004100 (10.7%) IPR050053 (10.7%) IPR000194 (9.9%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.7%) ATPase alpha/beta chains (10.7%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (9.9%)" SSGFEITDKIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.4%) GO:0005737 (14%) "GO:0004822 (14.5%) GO:0005524 (14.5%) GO:0000049 (14.2%)" isoleucyl-tRNA aminoacylation (14.4%) cytoplasm (14%) "isoleucine-tRNA ligase activity (14.5%) ATP binding (14.5%) tRNA binding (14.2%)" "IPR023586 (12.7%) IPR009080 (12.7%) IPR013155 (12.6%)" "Isoleucine-tRNA ligase, type 2 (12.7%) Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (12.7%) Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding (12.6%)" LDMISFGPTLR Pseudomonadati Bacteria Pseudomonadati "3.4.13.18 (98.7%) 3.4.13.- (0.6%) 3.4.13.20 (0.3%)" "cytosol non-specific dipeptidase (98.7%) Dipeptidases (0.6%) beta-Ala-His dipeptidase (0.3%)" "GO:0006508 (25.2%) GO:0043171 (0.1%)" GO:0005829 (25.1%) "GO:0070573 (25.2%) GO:0046872 (24.4%)" "proteolysis (25.2%) peptide catabolic process (0.1%)" cytosol (25.1%) "metallodipeptidase activity (25.2%) metal ion binding (24.4%)" "IPR001160 (31.3%) IPR002933 (30.9%) IPR011650 (30.7%)" "Peptidase M20C, Xaa-His dipeptidase (31.3%) Peptidase M20 (30.9%) Peptidase M20, dimerisation domain (30.7%)" YAVENFRVEQK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.5%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.5%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011263 (16.8%) IPR036603 (16.8%) IPR011260 (16.6%)" "DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) RNA polymerase, RBP11-like subunit (16.8%) RNA polymerase, alpha subunit, C-terminal (16.6%)" MDKNISFTIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.99.1 (65%) 1.3.5.1 (30%) 1.3.5.4 (5%)" "Deleted entry (65%) succinate dehydrogenase (30%) Transferred entry: 1.3.5.1 (5%)" "GO:0009060 (24.2%) GO:0022904 (24.2%)" "GO:0009055 (24.2%) GO:0051537 (24.2%) GO:0016491 (2.6%)" "aerobic respiration (24.2%) respiratory electron transport chain (24.2%)" "electron transfer activity (24.2%) 2 iron, 2 sulfur cluster binding (24.2%) oxidoreductase activity (2.6%)" "IPR006058 (14.3%) IPR009051 (14.3%) IPR012675 (14.3%)" "2Fe-2S ferredoxin, iron-sulphur binding site (14.3%) Alpha-helical ferredoxin (14.3%) Beta-grasp domain superfamily (14.3%)" KDCFENLCEAGVIDPAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" SETFTTAVDNQPSVEIHILQGER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005737 (22.5%) GO:0070013 (5.6%)" "GO:0005524 (23.9%) GO:0051082 (23.9%) GO:0140662 (23.9%)" "cytoplasm (22.5%) intracellular organelle lumen (5.6%)" "ATP binding (23.9%) unfolded protein binding (23.9%) ATP-dependent protein folding chaperone (23.9%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" ATTNFKGQPVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.11.1.24 (90.2%) 1.11.1.- (9.8%)" "thioredoxin-dependent peroxiredoxin (90.2%) Peroxidases (9.8%)" GO:0034599 (2.1%) GO:0008379 (97.9%) cellular response to oxidative stress (2.1%) thioredoxin peroxidase activity (97.9%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" ENAAGIPMDAAER Bacteria Bacteria 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) "GO:0009298 (19.9%) GO:0005975 (19.9%) GO:0009242 (0%)" GO:0005829 (19.9%) "GO:0004476 (19.9%) GO:0008270 (19.9%) GO:0016853 (0.3%)" "GDP-mannose biosynthetic process (19.9%) carbohydrate metabolic process (19.9%) colanic acid biosynthetic process (0%)" cytosol (19.9%) "mannose-6-phosphate isomerase activity (19.9%) zinc ion binding (19.9%) isomerase activity (0.3%)" "IPR016305 (12.6%) IPR046457 (12.6%) IPR001250 (12.6%)" "Mannose-6-phosphate isomerase (12.6%) Phosphomannose isomerase type I, catalytic domain (12.6%) Mannose-6-phosphate isomerase, type I (12.6%)" ALTEANGDIELAIENMRK root GO:0006414 (0.2%) "GO:0005737 (49.2%) GO:0005739 (0.1%) GO:0005829 (0.1%)" "GO:0003746 (50.2%) GO:0005085 (0.1%) GO:0008270 (0.1%)" translational elongation (0.2%) "cytoplasm (49.2%) mitochondrion (0.1%) cytosol (0.1%)" "translation elongation factor activity (50.2%) guanyl-nucleotide exchange factor activity (0.1%) zinc ion binding (0.1%)" "IPR001816 (20.1%) IPR009060 (20.1%) IPR018101 (20.1%)" "Translation elongation factor EFTs/EF1B (20.1%) UBA-like superfamily (20.1%) Translation elongation factor Ts, conserved site (20.1%)" GVEISGSDGGLFGGTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0044718 (2.3%) GO:0009279 (93%) "GO:0004180 (2.3%) GO:0015344 (2.3%)" siderophore transmembrane transport (2.3%) cell outer membrane (93%) "carboxypeptidase activity (2.3%) siderophore uptake transmembrane transporter activity (2.3%)" "IPR012910 (14.9%) IPR039426 (14.9%) IPR037066 (14.5%)" "TonB-dependent receptor, plug domain (14.9%) TonB-dependent receptor-like (14.9%) TonB-dependent receptor, plug domain superfamily (14.5%)" MEVNVYNIKGEDTGRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0005840 (20.6%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (18.2%) GO:0003723 (1.4%)" translation (20%) "ribosome (20.6%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (18.2%) RNA binding (1.4%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" YTLEDAHSATTLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005980 (32.4%) GO:0005975 (2.7%)" "GO:0004134 (32.4%) GO:0004135 (32.4%)" "glycogen catabolic process (32.4%) carbohydrate metabolic process (2.7%)" "4-alpha-glucanotransferase activity (32.4%) amylo-alpha-1,6-glucosidase activity (32.4%)" "IPR008928 (21%) IPR024742 (21%) IPR010401 (19.4%)" "Six-hairpin glycosidase superfamily (21%) Glycogen debranching enzyme, bacterial and archaeal type, N-terminal (21%) Glycogen debranching enzyme (19.4%)" ETIEIDGVTYPLVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR002150 (25%) IPR027493 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL31 type A/B (25%) Large ribosomal subunit protein bL31 type B (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" VIDLMCPFAK root "7.1.2.2 (94.2%) 3.6.3.14 (5.7%) 3.6.3.15 (0.1%)" "H(+)-transporting two-sector ATPase (94.2%) Transferred entry: 7.1.2.2 (5.7%) Transferred entry: 7.2.2.1 (0.1%)" GO:0042777 (0%) "GO:0045259 (25.2%) GO:0005886 (20.3%) GO:0016020 (0%)" "GO:0005524 (25.2%) GO:0046933 (25.2%) GO:0016787 (3%)" proton motive force-driven plasma membrane ATP synthesis (0%) "proton-transporting ATP synthase complex (25.2%) plasma membrane (20.3%) membrane (0%)" "ATP binding (25.2%) proton-transporting ATP synthase activity, rotational mechanism (25.2%) hydrolase activity (3%)" "IPR050053 (13.5%) IPR027417 (13.5%) IPR000194 (13.5%)" "ATPase alpha/beta chains (13.5%) P-loop containing nucleoside triphosphate hydrolase (13.5%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (13.5%)" GQDSEEVIAKR root 2.7.4.8 (100%) guanylate kinase (100%) GO:0034330 (0.1%) "GO:0005829 (33.1%) GO:0005737 (0.1%)" "GO:0004385 (33.1%) GO:0005524 (32.7%) GO:0016301 (0.7%)" cell junction organization (0.1%) "cytosol (33.1%) cytoplasm (0.1%)" "GMP kinase activity (33.1%) ATP binding (32.7%) kinase activity (0.7%)" "IPR008144 (20.2%) IPR008145 (20.2%) IPR027417 (20.2%)" "Guanylate kinase-like domain (20.2%) Guanylate kinase/L-type calcium channel beta subunit (20.2%) P-loop containing nucleoside triphosphate hydrolase (20.2%)" VTDIEPGLVGGTEFSNVR Pseudomonadati Bacteria Pseudomonadati "1.1.1.298 (48.5%) 1.1.1.381 (47.7%) 1.1.1.- (2.6%)" "3-hydroxypropionate dehydrogenase (NADP(+)) (48.5%) 3-hydroxy acid dehydrogenase (47.7%) With NAD(+) or NADP(+) as acceptor (2.6%)" "GO:0006212 (0.2%) GO:0051289 (0.2%)" "GO:0005829 (35.6%) GO:0032991 (0.2%)" "GO:0016616 (40.5%) GO:0035527 (19.9%) GO:0016491 (2.3%)" "uracil catabolic process (0.2%) protein homotetramerization (0.2%)" "cytosol (35.6%) protein-containing complex (0.2%)" "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (40.5%) 3-hydroxypropionate dehydrogenase (NADP+) activity (19.9%) oxidoreductase activity (2.3%)" "IPR036291 (33.2%) IPR002347 (33.1%) IPR020904 (33%)" "NAD(P)-binding domain superfamily (33.2%) Short-chain dehydrogenase/reductase SDR (33.1%) Short-chain dehydrogenase/reductase, conserved site (33%)" GMGSLEAMQK root 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (20.1%) GO:0006177 (19.8%)" GO:0005737 (2.5%) "GO:0003938 (20.1%) GO:0046872 (19.8%) GO:0000166 (17.6%)" "GTP biosynthetic process (20.1%) GMP biosynthetic process (19.8%)" cytoplasm (2.5%) "IMP dehydrogenase activity (20.1%) metal ion binding (19.8%) nucleotide binding (17.6%)" "IPR001093 (17.2%) IPR005990 (17.2%) IPR013785 (17.2%)" "IMP dehydrogenase/GMP reductase (17.2%) Inosine-5'-monophosphate dehydrogenase (17.2%) Aldolase-type TIM barrel (17.2%)" GTIQEAVTDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" DTVAEALTAGDKVQVIGFGTFETR HLKPNAIVLIDTDSFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.7.11 (50%) 1.2.7.3 (50%)" "2-oxoacid oxidoreductase (ferredoxin) (50%) 2-oxoglutarate synthase (50%)" GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.5%) IPR002880 (12.5%) IPR009014 (12.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" GDAISAGLSENMEKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis AQGTAENTELQESIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0007035 (20%) "GO:0016471 (20%) GO:0033179 (20%)" "GO:0046961 (20%) GO:0051117 (20%)" vacuolar acidification (20%) "vacuolar proton-transporting V-type ATPase complex (20%) proton-transporting V-type ATPase, V0 domain (20%)" "proton-transporting ATPase activity, rotational mechanism (20%) ATPase binding (20%)" IPR002490 (100%) V-type ATPase, V0 complex, 116kDa subunit family (100%) LGEHNIDVLEGNEQFINAAK Sus scrofa Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Laurasiatheria Artiodactyla Suina Suidae Sus Sus scrofa 3.4.21.4 (100%) trypsin (100%) "GO:0006508 (24.2%) GO:0007586 (24.2%)" "GO:0005576 (18.2%) GO:0005615 (6.1%)" "GO:0004252 (24.2%) GO:0046872 (3%)" "proteolysis (24.2%) digestion (24.2%)" "extracellular region (18.2%) extracellular space (6.1%)" "serine-type endopeptidase activity (24.2%) metal ion binding (3%)" "IPR001254 (14.3%) IPR001314 (14.3%) IPR009003 (14.3%)" "Serine proteases, trypsin domain (14.3%) Peptidase S1A, chymotrypsin family (14.3%) Peptidase S1, PA clan (14.3%)" ELWMERDDFMEDAPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (24.7%) GO:0005829 (24.7%) "GO:0004819 (24.7%) GO:0005524 (24.7%) GO:0016874 (1.2%)" glutaminyl-tRNA aminoacylation (24.7%) cytosol (24.7%) "glutamine-tRNA ligase activity (24.7%) ATP binding (24.7%) ligase activity (1.2%)" "IPR000924 (10%) IPR004514 (10%) IPR011035 (10%)" "Glutamyl/glutaminyl-tRNA synthetase (10%) Glutamine-tRNA synthetase (10%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (10%)" DNTPMFVMGVNDKTYAGQDIVSNASCTTNCLAPLAK Hafniaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Hafniaceae "1.2.1.- (87.5%) 1.2.1.12 (12.5%)" "With NAD(+) or NADP(+) as acceptor (87.5%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (12.5%)" "GO:0072524 (17.6%) GO:0006006 (14.7%) GO:0006096 (2.9%)" GO:0005737 (2.9%) "GO:0051287 (20.6%) GO:0050661 (14.7%) GO:0004365 (11.8%)" "pyridine-containing compound metabolic process (17.6%) glucose metabolic process (14.7%) glycolytic process (2.9%)" cytoplasm (2.9%) "NAD binding (20.6%) NADP binding (14.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (11.8%)" "IPR020828 (17.3%) IPR020829 (17.3%) IPR020830 (17.3%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17.3%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.3%) Glyceraldehyde 3-phosphate dehydrogenase, active site (17.3%)" ITGRPHGLFDYYGAEDAER Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.1 (60%) 1.2.1.51 (20%) 1.2.7.- (20%)" "pyruvate synthase (60%) pyruvate dehydrogenase (NADP(+)) (20%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (11.3%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (11.3%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" LDDICEDGVGLVADIVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.2.1.2 (94.4%) 4.1.2.- (5.6%)" "transaldolase (94.4%) Aldehyde-lyases (5.6%)" "GO:0005975 (17%) GO:0006098 (17%) GO:0042182 (15%)" GO:0005737 (17%) "GO:0004801 (17%) GO:0016832 (17%)" "carbohydrate metabolic process (17%) pentose-phosphate shunt (17%) ketone catabolic process (15%)" cytoplasm (17%) "transaldolase activity (17%) aldehyde-lyase activity (17%)" "IPR001585 (16.7%) IPR004731 (16.7%) IPR013785 (16.7%)" "Transaldolase/Fructose-6-phosphate aldolase (16.7%) Transaldolase type 3B/Fructose-6-phosphate aldolase (16.7%) Aldolase-type TIM barrel (16.7%)" QEPSAEAAVGLGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (43.5%) IPR019734 (43.5%) IPR013105 (13%)" "Tetratricopeptide-like helical domain superfamily (43.5%) Tetratricopeptide repeat (43.5%) Tetratricopeptide repeat 2 (13%)" DLDQISVVVGHDCR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.2.- (50%) 5.4.2.2 (50%)" "Phosphotransferases (phosphomutases) (50%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (50%)" "GO:0005975 (24.1%) GO:0006166 (24.1%)" "GO:0000287 (24.1%) GO:0008973 (24.1%) GO:0004614 (3.4%)" "carbohydrate metabolic process (24.1%) purine ribonucleoside salvage (24.1%)" "magnesium ion binding (24.1%) phosphopentomutase activity (24.1%) phosphoglucomutase activity (3.4%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" GQVTELGAVNVMTGIYTGR Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.9%) GO:0005829 (17.9%) "GO:0004612 (17.9%) GO:0005524 (17.9%) GO:0046872 (17.2%)" gluconeogenesis (17.9%) cytosol (17.9%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.9%) ATP binding (17.9%) metal ion binding (17.2%)" "IPR001272 (25.8%) IPR008210 (25.8%) IPR013035 (24.3%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.8%) Phosphoenolpyruvate carboxykinase, N-terminal (25.8%) Phosphoenolpyruvate carboxykinase, C-terminal (24.3%)" SADAAGVHAVIVPK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "2.1.1.185 (99.7%) 2.1.1.- (0.3%)" "23S rRNA (guanosine(2251)-2'-O)-methyltransferase (99.7%) Methyltransferases (0.3%)" "GO:0032259 (0.3%) GO:0006364 (0%)" GO:0005829 (33.1%) "GO:0003723 (33.1%) GO:0070039 (33.1%) GO:0008168 (0.3%)" "methylation (0.3%) rRNA processing (0%)" cytosol (33.1%) "RNA binding (33.1%) rRNA (guanosine-2'-O-)-methyltransferase activity (33.1%) methyltransferase activity (0.3%)" "IPR001537 (14.4%) IPR004441 (14.4%) IPR029026 (14.4%)" "tRNA/rRNA methyltransferase, SpoU type (14.4%) RNA methyltransferase TrmH (14.4%) tRNA (guanine-N1-)-methyltransferase, N-terminal (14.4%)" VFVAEPSVEDTIAILR root 3.6.1.15 (100%) nucleoside-triphosphate phosphatase (100%) "GO:0034605 (16.9%) GO:0042026 (15.8%) GO:0006508 (0.4%)" "GO:0005829 (15.3%) GO:0005737 (1.6%) GO:0005759 (0%)" "GO:0005524 (17%) GO:0016887 (16.9%) GO:0042802 (15.3%)" "cellular response to heat (16.9%) protein refolding (15.8%) proteolysis (0.4%)" "cytosol (15.3%) cytoplasm (1.6%) mitochondrial matrix (0%)" "ATP binding (17%) ATP hydrolysis activity (16.9%) identical protein binding (15.3%)" "IPR027417 (8.6%) IPR041546 (8.6%) IPR050130 (8.6%)" "P-loop containing nucleoside triphosphate hydrolase (8.6%) ClpA/ClpB, AAA lid domain (8.6%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%)" CKYDAPVDFGSEILLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006879 (20%) GO:0005829 (20%) "GO:0004322 (20%) GO:0008199 (20%) GO:0020037 (20%)" intracellular iron ion homeostasis (20%) cytosol (20%) "ferroxidase activity (20%) ferric iron binding (20%) heme binding (20%)" "IPR008331 (17.3%) IPR009078 (17.3%) IPR012347 (17.3%)" "Ferritin/DPS domain (17.3%) Ferritin-like superfamily (17.3%) Ferritin-like (17.3%)" KYDYIVGPSASCVAFVKENHPGILAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005829 (50%) GO:0016491 (50%) cytosol (50%) oxidoreductase activity (50%) IPR004017 (100%) Cysteine-rich domain (100%) FNDFQMHIEWQVPTNITGESQSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0016787 (90%) GO:0046872 (10%)" "hydrolase activity (90%) metal ion binding (10%)" IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) NATGALSIIAYEVENSGTCIRR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0043093 (33.3%) "GO:0009898 (33.3%) GO:0032153 (33.3%)" FtsZ-dependent cytokinesis (33.3%) "cytoplasmic side of plasma membrane (33.3%) cell division site (33.3%)" "IPR003494 (25%) IPR020823 (25%) IPR043129 (25%)" "SHS2 domain inserted in FtsA (25%) Cell division protein FtsA (25%) ATPase, nucleotide binding domain (25%)" FMDEIKKGTDANEALK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006879 (25%) GO:0005737 (25%) "GO:0008198 (25%) GO:0051537 (25%)" intracellular iron ion homeostasis (25%) cytoplasm (25%) "ferrous iron binding (25%) 2 iron, 2 sulfur cluster binding (25%)" VLPVIITYYADKSFDFVVK Flectobacillaceae Bacteria Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (16.7%) IPR006519 (16.7%) IPR020783 (16.7%)" "Ribosomal protein uL11 (16.7%) Large ribosomal subunit protein uL11, bacteria (16.7%) Large ribosomal subunit protein uL11, C-terminal (16.7%)" LLTTCNIPVPSDVR root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.6%) GO:0006094 (16.2%) GO:0008615 (0.2%)" "GO:0005829 (16.2%) GO:0005737 (0.2%)" "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.2%)" "glycolytic process (16.6%) gluconeogenesis (16.2%) pyridoxine biosynthetic process (0.2%)" "cytosol (16.2%) cytoplasm (0.2%)" "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.2%)" "IPR015824 (25.2%) IPR036043 (25.2%) IPR001576 (25%)" "Phosphoglycerate kinase, N-terminal (25.2%) Phosphoglycerate kinase superfamily (25.2%) Phosphoglycerate kinase (25%)" FKRPVVPGDQMIMEVTFEK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "4.2.1.59 (99.5%) 4.2.1.- (0.5%)" "3-hydroxyacyl-[acyl-carrier-protein] dehydratase (99.5%) Hydro-lyases (0.5%)" "GO:0009245 (20%) GO:0006633 (19.5%)" "GO:0005737 (20%) GO:0016020 (20%)" "GO:0019171 (16%) GO:0016836 (3.5%) GO:0016829 (0.9%)" "lipid A biosynthetic process (20%) fatty acid biosynthetic process (19.5%)" "cytoplasm (20%) membrane (20%)" "(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (16%) hydro-lyase activity (3.5%) lyase activity (0.9%)" "IPR013114 (33.7%) IPR029069 (33.7%) IPR010084 (32.6%)" "Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ (33.7%) HotDog domain superfamily (33.7%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (32.6%)" FILIDSHGLGMFSQHR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0019441 (50%) GO:0004061 (50%) L-tryptophan catabolic process to kynurenine (50%) arylformamidase activity (50%) IPR037175 (100%) Kynurenine formamidase superfamily (100%) QGLATPEEYEILEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" GAFEIFDAKREEKNPFINR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20.7%) GO:0009263 (17.2%)" "GO:0004748 (20.7%) GO:0031419 (20.7%) GO:0005524 (17.2%)" "DNA biosynthetic process (20.7%) deoxyribonucleotide biosynthetic process (17.2%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.7%) cobalamin binding (20.7%) ATP binding (17.2%)" "IPR000788 (26.1%) IPR013344 (26.1%) IPR050862 (26.1%)" "Ribonucleotide reductase large subunit, C-terminal (26.1%) Ribonucleotide reductase, adenosylcobalamin-dependent (26.1%) Ribonucleoside diphosphate reductase class-2 (26.1%)" NYEGAALDADNAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (61.3%) "GO:0016853 (35.5%) GO:0003755 (3.2%)" plasma membrane (61.3%) "isomerase activity (35.5%) peptidyl-prolyl cis-trans isomerase activity (3.2%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" TLAATKDFVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.2%) GO:0017038 (11.2%) GO:0043952 (11.2%)" "GO:0005829 (11.2%) GO:0005886 (11.2%) GO:0031522 (11.2%)" "GO:0005524 (11.2%) GO:0046872 (10.3%) GO:0008564 (0.4%)" "protein targeting (11.2%) protein import (11.2%) protein transport by the Sec complex (11.2%)" "cytosol (11.2%) plasma membrane (11.2%) cell envelope Sec protein transport complex (11.2%)" "ATP binding (11.2%) metal ion binding (10.3%) protein-exporting ATPase activity (0.4%)" "IPR000185 (8.1%) IPR011115 (8.1%) IPR014018 (8.1%)" "Protein translocase subunit SecA (8.1%) SecA DEAD-like, N-terminal (8.1%) SecA motor DEAD (8.1%)" GSYDQLQAVYDTIYGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0003700 (50%) GO:0043565 (50%)" "DNA-binding transcription factor activity (50%) sequence-specific DNA binding (50%)" "IPR010499 (14.6%) IPR011256 (14.6%) IPR029442 (14.6%)" "Bacterial transcription activator, effector binding (14.6%) Regulatory factor, effector binding domain superfamily (14.6%) GyrI-like small molecule binding domain (14.6%)" NIPEKDIPIAHHWLILHGR QYDINEAIALLK root "GO:0006417 (16.8%) GO:0006412 (16.3%) GO:0000027 (0%)" "GO:0022625 (16.9%) GO:0005840 (0.5%) GO:0005737 (0%)" "GO:0000049 (16.4%) GO:0003735 (16.3%) GO:0019843 (16.3%)" "regulation of translation (16.8%) translation (16.3%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (16.9%) ribosome (0.5%) cytoplasm (0%)" "tRNA binding (16.4%) structural constituent of ribosome (16.3%) rRNA binding (16.3%)" "IPR023674 (17.2%) IPR028364 (16.9%) IPR016095 (16.5%)" "Ribosomal protein uL1-like (17.2%) Ribosomal protein uL1/ribosomal biogenesis protein (16.9%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.5%)" VDIALPCATQNELNGEDACNLIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (25%) GO:0005829 (25%) "GO:0000166 (25%) GO:0004354 (25%)" glutamate biosynthetic process (25%) cytosol (25%) "nucleotide binding (25%) glutamate dehydrogenase (NADP+) activity (25%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" IVIKPNIGWDRSPELAGNTNPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR007160 (100%) Domain of unknown function DUF362 (100%) VAIVGVSGAVGQEFLR root 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0019877 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) diaminopimelate biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000534 (20.1%) IPR012280 (20.1%) IPR036291 (20.1%)" "Semialdehyde dehydrogenase, NAD-binding (20.1%) Semialdehyde dehydrogenase, dimerisation domain (20.1%) NAD(P)-binding domain superfamily (20.1%)" DSLPEGVYNDQFKK root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.5%) GO:0006418 (0.1%) GO:0034605 (0.1%)" "GO:0005829 (14.5%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0000049 (14.5%) GO:0004824 (14.5%) GO:0005524 (14.5%)" "lysyl-tRNA aminoacylation (14.5%) tRNA aminoacylation for protein translation (0.1%) cellular response to heat (0.1%)" "cytosol (14.5%) cytoplasm (0.1%) membrane (0.1%)" "tRNA binding (14.5%) lysine-tRNA ligase activity (14.5%) ATP binding (14.5%)" "IPR004365 (11.6%) IPR012340 (11.6%) IPR044136 (11.5%)" "OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.6%) Nucleic acid-binding, OB-fold (11.6%) Lysine-tRNA ligase, class II, N-terminal (11.5%)" PAFGGNIVATIINPEHRPQMATVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033539 (33.3%) "GO:0009055 (33.3%) GO:0050660 (33.3%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (33.3%) "electron transfer activity (33.3%) flavin adenine dinucleotide binding (33.3%)" "IPR001308 (16.7%) IPR014729 (16.7%) IPR014730 (16.7%)" "Electron transfer flavoprotein alpha subunit/FixB (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.7%)" FAGALDTYTIEAMMQDGK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.1%) IPR004499 (11.1%) IPR006195 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Proline-tRNA ligase, class IIa, archaeal-type (11.1%) Aminoacyl-tRNA synthetase, class II (11.1%)" LTNHSLYLYGHCAEGDCREDEHAHEGK root "GO:1900705 (19.4%) GO:0045892 (1.8%) GO:0045893 (0.3%)" "GO:0005829 (19.4%) GO:0032993 (0.3%)" "GO:0000976 (19.4%) GO:0008270 (19.4%) GO:0001217 (17.9%)" "negative regulation of siderophore biosynthetic process (19.4%) negative regulation of DNA-templated transcription (1.8%) positive regulation of DNA-templated transcription (0.3%)" "cytosol (19.4%) protein-DNA complex (0.3%)" "transcription cis-regulatory region binding (19.4%) zinc ion binding (19.4%) DNA-binding transcription repressor activity (17.9%)" "IPR043135 (25.5%) IPR002481 (24.8%) IPR036388 (24.8%)" "Ferric-uptake regulator, C-terminal domain (25.5%) Ferric-uptake regulator (24.8%) Winged helix-like DNA-binding domain superfamily (24.8%)" AAYEQYQMAVDGAQSEDKASAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016020 (100%) membrane (100%) IPR032317 (100%) Unknown (100%) DFRETDVELLQLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.17.7.3 (100%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (100%) "GO:0016114 (17.1%) GO:0019288 (17.1%)" "GO:0005506 (17.1%) GO:0046429 (17.1%) GO:0051539 (17.1%)" "terpenoid biosynthetic process (17.1%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.1%)" "iron ion binding (17.1%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.1%) 4 iron, 4 sulfur cluster binding (17.1%)" "IPR004588 (25%) IPR011005 (25%) IPR017178 (25%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25%) Dihydropteroate synthase-like superfamily (25%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (25%)" VNLAQYVVENDNQIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR032573 (100%) Protein of unknown function DUF4925 (100%) HGYNIGLSGFTPAGTPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.8.3.- (80%) 3.1.2.1 (20%)" "CoA-transferases (80%) acetyl-CoA hydrolase (20%)" "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" LKEIDEVVKEDLE Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis MNKTQLIDVIAEKAELSKTQAK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0030261 (11.7%) GO:0006270 (10.5%) GO:0006351 (10.5%)" "GO:0005829 (11.7%) GO:1990103 (10.5%) GO:1990178 (10.5%)" "GO:0003677 (12.1%) GO:0030527 (11.7%) GO:0042802 (10.5%)" "chromosome condensation (11.7%) DNA replication initiation (10.5%) DNA-templated transcription (10.5%)" "cytosol (11.7%) DnaA-HU complex (10.5%) HU-DNA complex (10.5%)" "DNA binding (12.1%) structural constituent of chromatin (11.7%) identical protein binding (10.5%)" "IPR000119 (33.6%) IPR010992 (33.6%) IPR020816 (32.8%)" "Histone-like DNA-binding protein (33.6%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.6%) Histone-like DNA-binding protein, conserved site (32.8%)" PAFGGNIVATIVNPEHRPQMATVR Pseudomonadati Bacteria Pseudomonadati 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) GO:0033539 (32.1%) "GO:0009055 (32.1%) GO:0050660 (32.1%) GO:0016491 (3.4%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (32.1%) "electron transfer activity (32.1%) flavin adenine dinucleotide binding (32.1%) oxidoreductase activity (3.4%)" "IPR001308 (16.9%) IPR014729 (16.9%) IPR014730 (16.9%)" "Electron transfer flavoprotein alpha subunit/FixB (16.9%) Rossmann-like alpha/beta/alpha sandwich fold (16.9%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.9%)" LGYPPLVTPFSQYVK Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.1.3.1 (40%) 6.4.1.1 (40%) 4.1.1.112 (12.5%)" "methylmalonyl-CoA carboxytransferase (40%) pyruvate carboxylase (40%) oxaloacetate decarboxylase (12.5%)" GO:0006094 (20.4%) GO:0005737 (20.1%) "GO:0003824 (28.6%) GO:0004736 (23.3%) GO:0047154 (4.3%)" gluconeogenesis (20.4%) cytoplasm (20.1%) "catalytic activity (28.6%) pyruvate carboxylase activity (23.3%) methylmalonyl-CoA carboxytransferase activity (4.3%)" "IPR003379 (22.5%) IPR013785 (22.5%) IPR000891 (22.2%)" "Carboxylase, conserved domain (22.5%) Aldolase-type TIM barrel (22.5%) Pyruvate carboxyltransferase (22.2%)" ADNMPNDNIDR Bacillota Bacteria Bacillati Bacillota GO:0006355 (33.3%) GO:0005829 (33.3%) GO:0003677 (33.3%) regulation of DNA-templated transcription (33.3%) cytosol (33.3%) DNA binding (33.3%) "IPR002876 (16.7%) IPR017856 (16.7%) IPR026564 (16.7%)" "Transcriptional regulator TACO1-like (16.7%) Integrase-like, N-terminal (16.7%) Transcriptional regulator TACO1-like, domain 3 (16.7%)" HKANLTAQINKLA Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0005829 (19.7%) GO:0015935 (19.7%) GO:0005840 (0.6%)" "GO:0003735 (19.9%) GO:0070181 (19.8%) GO:0003723 (0%)" "translation (19.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosol (19.7%) small ribosomal subunit (19.7%) ribosome (0.6%)" "structural constituent of ribosome (19.9%) small ribosomal subunit rRNA binding (19.8%) RNA binding (0%)" "IPR036510 (50.1%) IPR002583 (49.9%)" "Small ribosomal subunit protein bS20 superfamily (50.1%) Small ribosomal subunit protein bS20 (49.9%)" ADILTFHTPLFK root "1.1.1.290 (97.8%) 1.1.1.- (2.2%)" "4-phosphoerythronate dehydrogenase (97.8%) With NAD(+) or NADP(+) as acceptor (2.2%)" "GO:0008615 (16.6%) GO:0036001 (16.6%)" "GO:0005829 (16.7%) GO:0016020 (0.1%)" "GO:0033711 (16.7%) GO:0051287 (16.7%) GO:0046983 (16.2%)" "pyridoxine biosynthetic process (16.6%) 'de novo' pyridoxal 5'-phosphate biosynthetic process (16.6%)" "cytosol (16.7%) membrane (0.1%)" "4-phosphoerythronate dehydrogenase activity (16.7%) NAD binding (16.7%) protein dimerization activity (16.2%)" "IPR006140 (12.7%) IPR036291 (12.7%) IPR029752 (12.5%)" "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (12.7%) NAD(P)-binding domain superfamily (12.7%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 (12.5%)" LEVPSDEANLDGLNFLAGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20.1%) IPR018189 (20.1%) IPR035476 (20.1%)" "Phosphoglucose isomerase (PGI) (20.1%) Phosphoglucose isomerase, conserved site (20.1%) Phosphoglucose isomerase, SIS domain 1 (20.1%)" YCEDLFNEEFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" AFYNSQLGRYEEFVTR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.6.1.13 (100%) ornithine aminotransferase (100%) "GO:0010121 (14.6%) GO:0019544 (14.6%) GO:0055129 (12.2%)" GO:0005737 (14.6%) "GO:0004587 (14.6%) GO:0030170 (14.6%) GO:0042802 (14.6%)" "L-arginine catabolic process to proline via ornithine (14.6%) L-arginine catabolic process to L-glutamate (14.6%) L-proline biosynthetic process (12.2%)" cytoplasm (14.6%) "ornithine aminotransferase activity (14.6%) pyridoxal phosphate binding (14.6%) identical protein binding (14.6%)" "IPR005814 (14.3%) IPR010164 (14.3%) IPR015421 (14.3%)" "Aminotransferase class-III (14.3%) Ornithine aminotransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%)" NTPVSELITLGENMGLENLAR root 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.5%) "GO:0005829 (14.1%) GO:0016020 (0%)" "GO:0003723 (14.3%) GO:0005524 (14.3%) GO:0008186 (14.3%)" DNA-templated transcription termination (14.5%) "cytosol (14.1%) membrane (0%)" "RNA binding (14.3%) ATP binding (14.3%) ATP-dependent activity, acting on RNA (14.3%)" "IPR011112 (10.2%) IPR036269 (10.2%) IPR004665 (10.1%)" "Rho termination factor-like, N-terminal (10.2%) Rho termination factor, N-terminal domain superfamily (10.2%) Transcription termination factor Rho (10.1%)" LITSLYGCPHGVYAMSQDIPGLVETSTNLASVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" IRRDDEVIVLTGKDK root "GO:0006412 (16.7%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (17%) GO:1990904 (16.6%) GO:0005829 (16%)" "GO:0003735 (16.7%) GO:0019843 (16.5%) GO:0003723 (0.2%)" "translation (16.7%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (17%) ribonucleoprotein complex (16.6%) cytosol (16%)" "structural constituent of ribosome (16.7%) rRNA binding (16.5%) RNA binding (0.2%)" "IPR005824 (14.5%) IPR005825 (14.5%) IPR008991 (14.5%)" "KOW (14.5%) Large ribosomal subunit protein uL24, conserved site (14.5%) Translation protein SH3-like domain superfamily (14.5%)" MKTFEELGVAAPILK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.6.4.13 (87.5%) 3.6.4.- (12.5%)" "RNA helicase (87.5%) Acting on ATP; involved in cellular and subcellular movement (12.5%)" "GO:0009266 (9.1%) GO:0042255 (9.1%)" GO:0005829 (16.4%) "GO:0003676 (16.4%) GO:0003724 (16.4%) GO:0005524 (16.4%)" "response to temperature stimulus (9.1%) ribosome assembly (9.1%)" cytosol (16.4%) "nucleic acid binding (16.4%) RNA helicase activity (16.4%) ATP binding (16.4%)" "IPR000629 (10%) IPR001650 (10%) IPR005580 (10%)" "ATP-dependent RNA helicase DEAD-box, conserved site (10%) Helicase, C-terminal domain-like (10%) DEAD box helicase DbpA/CsdA, RNA-binding domain (10%)" SLEGYYQETGR root "5.6.2.4 (88.8%) 3.6.4.12 (10.9%) 2.7.11.1 (0.1%)" "DNA 3'-5' helicase (88.8%) DNA helicase (10.9%) non-specific serine/threonine protein kinase (0.1%)" "GO:0006260 (8.4%) GO:0006281 (4.7%) GO:0006310 (4.7%)" "GO:0005737 (8.7%) GO:0030894 (4.7%) GO:0043590 (4.7%)" "GO:0043138 (8.7%) GO:0009378 (8.7%) GO:0005524 (8.6%)" "DNA replication (8.4%) DNA repair (4.7%) DNA recombination (4.7%)" "cytoplasm (8.7%) replisome (4.7%) bacterial nucleoid (4.7%)" "3'-5' DNA helicase activity (8.7%) four-way junction helicase activity (8.7%) ATP binding (8.6%)" "IPR001650 (8.2%) IPR027417 (8.2%) IPR032284 (8.2%)" "Helicase, C-terminal domain-like (8.2%) P-loop containing nucleoside triphosphate hydrolase (8.2%) ATP-dependent DNA helicase RecQ, zinc-binding domain (8.2%)" DTILFEQPLDAADDKVTVYDLGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.22 (100%) histidine decarboxylase (100%) GO:0006520 (50%) "GO:0016831 (46.7%) GO:0004398 (3.3%)" amino acid metabolic process (50%) "carboxy-lyase activity (46.7%) histidine decarboxylase activity (3.3%)" "IPR016104 (78.9%) IPR016105 (21.1%)" "Pyruvoyl-dependent histidine/arginine decarboxylase (78.9%) Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain (21.1%)" LIESAQQAAITVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (14%) GO:0030148 (14%) GO:0006567 (0.3%)" "GO:0005829 (14.4%) GO:0016020 (14%)" "GO:0008890 (14.4%) GO:0030170 (14.4%) GO:0004758 (7.4%)" "L-threonine catabolic process to glycine (14%) sphingolipid biosynthetic process (14%) L-threonine catabolic process (0.3%)" "cytosol (14.4%) membrane (14%)" "glycine C-acetyltransferase activity (14.4%) pyridoxal phosphate binding (14.4%) serine C-palmitoyltransferase activity (7.4%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" IIASTDKVAIAAYQIKEEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (12.5%) IPR004739 (12.5%) IPR014729 (12.5%)" "GMP synthase, C-terminal (12.5%) GMP synthase, glutamine amidotransferase (12.5%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" FFFVAPTEYDEKTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004818 (16.7%) GO:0005524 (16.7%)" glutamyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR000924 (10%) IPR004527 (10%) IPR008925 (10%)" "Glutamyl/glutaminyl-tRNA synthetase (10%) Glutamate-tRNA ligase, bacterial/mitochondrial (10%) Aminoacyl-tRNA synthetase, class I, anticodon-binding superfamily (10%)" DELKKGVDELANAVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.4%) GO:0005737 (15.6%) "GO:0005524 (17.4%) GO:0140662 (17.4%) GO:0016853 (16.5%)" protein refolding (17.4%) cytoplasm (15.6%) "ATP binding (17.4%) ATP-dependent protein folding chaperone (17.4%) isomerase activity (16.5%)" "IPR001844 (17.3%) IPR002423 (17.3%) IPR018370 (16.4%)" "Chaperonin Cpn60/GroEL (17.3%) Chaperonin Cpn60/GroEL/TCP-1 family (17.3%) Chaperonin Cpn60, conserved site (16.4%)" IGEEALVSGTGSWVPNLQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.2.17 (100%) L-fuculose-phosphate aldolase (100%) GO:0019323 (33.3%) GO:0005829 (33.3%) "GO:0016832 (29.4%) GO:0008738 (3.9%)" pentose catabolic process (33.3%) cytosol (33.3%) "aldehyde-lyase activity (29.4%) L-fuculose-phosphate aldolase activity (3.9%)" "IPR001303 (33.3%) IPR036409 (33.3%) IPR050197 (33.3%)" "Class II aldolase/adducin N-terminal (33.3%) Class II aldolase/adducin N-terminal domain superfamily (33.3%) Aldolase class II family, sugar metabolism enzymes (33.3%)" QILPEANSQIVGFR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 5.1.3.20 (100%) ADP-glyceromanno-heptose 6-epimerase (100%) "GO:0097171 (22.2%) GO:0009244 (21.1%) GO:0005975 (4.6%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0008712 (26.1%) GO:0050661 (25.6%) GO:0016853 (0.2%)" "ADP-L-glycero-beta-D-manno-heptose biosynthetic process (22.2%) lipopolysaccharide core region biosynthetic process (21.1%) carbohydrate metabolic process (4.6%)" "cytosol (0%) membrane (0%)" "ADP-glyceromanno-heptose 6-epimerase activity (26.1%) NADP binding (25.6%) isomerase activity (0.2%)" "IPR001509 (33.6%) IPR036291 (33.6%) IPR011912 (32.8%)" "NAD-dependent epimerase/dehydratase (33.6%) NAD(P)-binding domain superfamily (33.6%) ADP-L-glycero-D-manno-heptose-6-epimerase (32.8%)" FSQYDITDIDGVKIDFPDKWVHLR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae "5.4.2.10 (66.7%) 5.4.2.2 (33.3%)" "phosphoglucosamine mutase (66.7%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (33.3%)" "GO:0005975 (13.6%) GO:0006048 (13.6%) GO:0009252 (13.6%)" GO:0005829 (13.6%) "GO:0000287 (13.6%) GO:0004615 (13.6%) GO:0008966 (13.6%)" "carbohydrate metabolic process (13.6%) UDP-N-acetylglucosamine biosynthetic process (13.6%) peptidoglycan biosynthetic process (13.6%)" cytosol (13.6%) "magnesium ion binding (13.6%) phosphomannomutase activity (13.6%) phosphoglucosamine mutase activity (13.6%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" GDKLAQDIFEYTGR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (71.4%) GO:0004340 (28.6%)" "kinase activity (71.4%) glucokinase activity (28.6%)" "IPR000600 (34%) IPR049874 (34%) IPR043129 (31.9%)" "ROK family (34%) ROK, conserved site (34%) ATPase, nucleotide binding domain (31.9%)" HGKGFEGLYNR Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.11.1.1 (97%) 1.14.13.81 (3%)" "NADH peroxidase (97%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (3%)" "GO:0005506 (50%) GO:0016491 (21.8%) GO:0004601 (18.7%)" "iron ion binding (50%) oxidoreductase activity (21.8%) peroxidase activity (18.7%)" "IPR052773 (12.6%) IPR003251 (12.6%) IPR009040 (12.6%)" "Anaerobic Bacterial Peroxidase-Related (12.6%) Rubrerythrin, diiron-binding domain (12.6%) Ferritin-like diiron domain (12.6%)" KDYDSHKENPNEVSSPDKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (25%) GO:0006183 (25%)" "GO:0003938 (25%) GO:0046872 (25%)" "GMP biosynthetic process (25%) GTP biosynthetic process (25%)" "IMP dehydrogenase activity (25%) metal ion binding (25%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" MMYEKENPNIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0000902 (25.3%) GO:0008360 (25.3%)" GO:0005737 (25.3%) GO:0005524 (24.1%) "cell morphogenesis (25.3%) regulation of cell shape (25.3%)" cytoplasm (25.3%) ATP binding (24.1%) "IPR004753 (33.3%) IPR043129 (33.3%) IPR056546 (33.3%)" "Cell shape determining protein MreB (33.3%) ATPase, nucleotide binding domain (33.3%) MreB/MamK-like (33.3%)" QLDVLALFK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) "GO:0005975 (25%) GO:0030203 (25%)" GO:0016020 (25%) GO:0004563 (25%) "carbohydrate metabolic process (25%) glycosaminoglycan metabolic process (25%)" membrane (25%) beta-N-acetylhexosaminidase activity (25%) "IPR011658 (16.3%) IPR015882 (16.3%) IPR015883 (16.3%)" "PA14 domain (16.3%) Beta-hexosaminidase, bacterial type, N-terminal (16.3%) Glycoside hydrolase family 20, catalytic domain (16.3%)" LINEYPIDSIEDGMSENDWEGWKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.5%) "GO:0000015 (16.5%) GO:0005576 (16.5%) GO:0009986 (16.5%)" "GO:0000287 (16.5%) GO:0004634 (16.5%) GO:0016829 (0.9%)" glycolytic process (16.5%) "phosphopyruvate hydratase complex (16.5%) extracellular region (16.5%) cell surface (16.5%)" "magnesium ion binding (16.5%) phosphopyruvate hydratase activity (16.5%) lyase activity (0.9%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" LFQMHSNKQNPMEVIGCGDIGAGVGFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" LVDVSHDVIINEEDCGTLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) GO:0000428 (17%) "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (15.2%)" DNA-templated transcription (16.9%) DNA-directed RNA polymerase complex (17%) "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (15.2%)" "IPR007081 (9.2%) IPR045867 (9.2%) IPR007083 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.2%) DNA-directed RNA polymerase, subunit beta-prime (9.2%) RNA polymerase Rpb1, domain 4 (9.1%)" SEVRLPNGVLR root "GO:0006412 (19.9%) GO:0002181 (0%) GO:0032259 (0%)" "GO:0005840 (20.1%) GO:1990904 (19.9%) GO:0022625 (0.1%)" "GO:0003735 (20%) GO:0019843 (19.9%) GO:0008168 (0%)" "translation (19.9%) cytoplasmic translation (0%) methylation (0%)" "ribosome (20.1%) ribonucleoprotein complex (19.9%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (20%) rRNA binding (19.9%) methyltransferase activity (0%)" "IPR020069 (14.3%) IPR036791 (14.3%) IPR020594 (14.3%)" "Large ribosomal subunit protein bL9, C-terminal (14.3%) Large ribosomal subunit protein bL9, C-terminal domain superfamily (14.3%) Large ribosomal subunit protein bL9, bacteria/chloroplast (14.3%)" GITGEVLLQMLEGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" MSLGGVHDEAEIR root "3.4.21.53 (99.7%) 3.4.21.- (0.3%)" "endopeptidase La (99.7%) Serine endopeptidases (0.3%)" "GO:0006515 (11.6%) GO:0034605 (11.5%) GO:0030163 (1%)" "GO:0005737 (12.1%) GO:0009536 (0%) GO:0016020 (0%)" "GO:0004176 (12.6%) GO:0004252 (12.6%) GO:0005524 (12.6%)" "protein quality control for misfolded or incompletely synthesized proteins (11.6%) cellular response to heat (11.5%) protein catabolic process (1%)" "cytoplasm (12.1%) plastid (0%) membrane (0%)" "ATP-dependent peptidase activity (12.6%) serine-type endopeptidase activity (12.6%) ATP binding (12.6%)" "IPR027065 (7.3%) IPR003959 (7.3%) IPR027417 (7.2%)" "Lon protease (7.3%) ATPase, AAA-type, core (7.3%) P-loop containing nucleoside triphosphate hydrolase (7.2%)" IYGMPYTADNGASLGVPVIVKPLER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" SVRFPGLISYVTPPGGGTTDYAVDIYYSAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" CTEEHQAIVRK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.1.1.33 (100%) tRNA (guanine(46)-N(7))-methyltransferase (100%) GO:0042255 (0.2%) GO:0005829 (99.4%) "GO:0003677 (0.2%) GO:0008176 (0.2%)" ribosome assembly (0.2%) cytosol (99.4%) "DNA binding (0.2%) tRNA (guanine(46)-N7)-methyltransferase activity (0.2%)" "IPR007416 (99.5%) IPR003358 (0.2%) IPR029063 (0.2%)" "YggL 50S ribosome-binding protein (99.5%) tRNA (guanine-N-7) methyltransferase, Trmb type (0.2%) S-adenosyl-L-methionine-dependent methyltransferase superfamily (0.2%)" IWDIFDMRPK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 2.5.1.6 (100%) methionine adenosyltransferase (100%) "GO:0006556 (16.7%) GO:0006730 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0004478 (16.7%) GO:0005524 (16.7%)" "S-adenosylmethionine biosynthetic process (16.7%) one-carbon metabolic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) methionine adenosyltransferase activity (16.7%) ATP binding (16.7%)" "IPR002133 (16.7%) IPR022628 (16.7%) IPR022629 (16.7%)" "S-adenosylmethionine synthetase (16.7%) S-adenosylmethionine synthetase, N-terminal (16.7%) S-adenosylmethionine synthetase, central domain (16.7%)" EYCHEENDEELRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (7.9%) IPR003029 (7.9%) IPR004087 (7.9%)" "Exoribonuclease, phosphorolytic domain 1 (7.9%) S1 domain (7.9%) K Homology domain (7.9%)" GIYYNLNMGDKFDAIEAEMNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" ENEPFDVALRR root "GO:0006412 (24.9%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0005840 (25.1%) GO:1990904 (24.9%) GO:0022627 (0%)" "GO:0003735 (24.9%) GO:0016787 (0.1%) GO:0003677 (0%)" "translation (24.9%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (25.1%) ribonucleoprotein complex (24.9%) cytosolic small ribosomal subunit (0%)" "structural constituent of ribosome (24.9%) hydrolase activity (0.1%) DNA binding (0%)" "IPR001911 (33.5%) IPR038380 (33.4%) IPR018278 (33%)" "Small ribosomal subunit protein bS21 (33.5%) Small ribosomal subunit protein bS21 superfamily (33.4%) Small ribosomal subunit protein bS21, conserved site (33%)" EVTWMPAYGPEQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (53.8%) 1.2.7.3 (42.3%) 1.2.7.7 (3.8%)" "pyruvate synthase (53.8%) 2-oxoglutarate synthase (42.3%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) (3.8%)" "GO:0016903 (84.6%) GO:0019164 (7%) GO:0047553 (5.5%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (84.6%) pyruvate synthase activity (7%) 2-oxoglutarate synthase activity (5.5%)" "IPR019752 (33.1%) IPR052554 (33.1%) IPR002869 (32.9%)" "Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.1%) 2-oxoglutarate synthase subunit KorC (33.1%) Pyruvate-flavodoxin oxidoreductase, central domain (32.9%)" FTDASELVCVTLLANKEGVDLTNLGRR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016787 (100%) hydrolase activity (100%) "IPR001466 (20%) IPR005180 (20%) IPR012338 (20%)" "Beta-lactamase-related (20%) Domain of unknown function DUF302 (20%) Beta-lactamase/transpeptidase-like (20%)" NVDPWGGSYYVESLTNELAHK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (19.8%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (19.8%)" "IPR006098 (16.8%) IPR006099 (16.8%) IPR016176 (16.8%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.8%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.8%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (16.8%)" DQPLDTDYHEAIAVIPAPTEEQKGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006457 (16.7%) GO:0005737 (16.7%) "GO:0000774 (16.7%) GO:0042803 (16.7%) GO:0051082 (16.7%)" protein folding (16.7%) cytoplasm (16.7%) "adenyl-nucleotide exchange factor activity (16.7%) protein homodimerization activity (16.7%) unfolded protein binding (16.7%)" "IPR000740 (33.3%) IPR009012 (33.3%) IPR013805 (33.3%)" "GrpE nucleotide exchange factor (33.3%) GrpE nucleotide exchange factor, head (33.3%) GrpE nucleotide exchange factor, coiled-coil (33.3%)" MKEVEKNEIKR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria GO:0005829 (100%) cytosol (100%) IPR021230 (100%) Protein of unknown function DUF2810 (100%) GLMTTVHAATATQK root "1.2.1.- (83.1%) 1.2.1.12 (16.9%)" "With NAD(+) or NADP(+) as acceptor (83.1%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (16.9%)" "GO:0006096 (16%) GO:0006006 (15%) GO:0019682 (0.4%)" "GO:0005737 (14.6%) GO:0005829 (1.4%) GO:0005634 (0.1%)" "GO:0051287 (18.6%) GO:0050661 (15%) GO:0004365 (10.5%)" "glycolytic process (16%) glucose metabolic process (15%) glyceraldehyde-3-phosphate metabolic process (0.4%)" "cytoplasm (14.6%) cytosol (1.4%) nucleus (0.1%)" "NAD binding (18.6%) NADP binding (15%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (10.5%)" "IPR020829 (17.3%) IPR020831 (17.3%) IPR036291 (17.2%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.3%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.3%) NAD(P)-binding domain superfamily (17.2%)" STCSTKETIEFEGETYPLVK Bacteria Bacteria GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR002150 (25.8%) IPR027493 (25.8%) IPR034704 (24.2%)" "Large ribosomal subunit protein bL31 type A/B (25.8%) Large ribosomal subunit protein bL31 type B (25.8%) Large ribosomal subunit protein bL28/bL31-like superfamily (24.2%)" VLESAIANAEHNDGADIDDLKVTK root "GO:0006412 (24.7%) GO:0002181 (0.1%) GO:0042255 (0%)" "GO:0022625 (24.7%) GO:0005840 (0.5%) GO:0015934 (0.1%)" "GO:0003735 (24.8%) GO:0019843 (24.7%) GO:0016740 (0%)" "translation (24.7%) cytoplasmic translation (0.1%) ribosome assembly (0%)" "cytosolic large ribosomal subunit (24.7%) ribosome (0.5%) large ribosomal subunit (0.1%)" "structural constituent of ribosome (24.8%) rRNA binding (24.7%) transferase activity (0%)" "IPR001063 (19.8%) IPR005727 (19.8%) IPR036394 (19.8%)" "Large ribosomal subunit protein uL22 (19.8%) Large ribosomal subunit protein uL22, bacterial/chloroplast-type (19.8%) Ribosomal protein uL22 superfamily (19.8%)" DAEIYPASFFNQTFQLTHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GFGFITPEDGSK root "GO:0010468 (0.3%) GO:0006139 (0.1%) GO:0006950 (0.1%)" "GO:0005829 (47.3%) GO:0005737 (1.6%) GO:0016020 (0.2%)" "GO:0003676 (29%) GO:0003677 (19.9%) GO:0003723 (0.1%)" "regulation of gene expression (0.3%) nucleobase-containing compound metabolic process (0.1%) response to stress (0.1%)" "cytosol (47.3%) cytoplasm (1.6%) membrane (0.2%)" "nucleic acid binding (29%) DNA binding (19.9%) RNA binding (0.1%)" "IPR002059 (16.8%) IPR012340 (16.8%) IPR011129 (16.8%)" "Cold-shock protein Csp, DNA-binding (16.8%) Nucleic acid-binding, OB-fold (16.8%) Cold-shock domain (16.8%)" NLATNLLGADGSVGIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.87 (100%) L-threonylcarbamoyladenylate synthase (100%) "GO:0006450 (14.3%) GO:0008033 (14.3%)" GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0003725 (14.3%) GO:0016779 (14.3%)" "regulation of translational fidelity (14.3%) tRNA processing (14.3%)" cytoplasm (14.3%) "tRNA binding (14.3%) double-stranded RNA binding (14.3%) nucleotidyltransferase activity (14.3%)" "IPR006070 (33.3%) IPR017945 (33.3%) IPR050156 (33.3%)" "Threonylcarbamoyl-AMP synthase-like domain (33.3%) DHBP synthase RibB-like alpha/beta domain superfamily (33.3%) Threonylcarbamoyl-AMP synthase, SUA5 (33.3%)" IKNDQITPWMEAFVNAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.5%) GO:0006164 (0.8%)" GO:0005737 (20.3%) "GO:0004642 (20.3%) GO:0005524 (19.5%) GO:0046872 (19.5%)" "'de novo' IMP biosynthetic process (19.5%) purine nucleotide biosynthetic process (0.8%)" cytoplasm (20.3%) "phosphoribosylformylglycinamidine synthase activity (20.3%) ATP binding (19.5%) metal ion binding (19.5%)" "IPR029062 (11.5%) IPR010073 (11.1%) IPR010918 (11.1%)" "Class I glutamine amidotransferase-like (11.5%) Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%)" FFHQVTQVPRPSKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.4.13.18 (92.9%) 3.4.13.- (3.6%) 3.4.13.20 (3.6%)" "cytosol non-specific dipeptidase (92.9%) Dipeptidases (3.6%) beta-Ala-His dipeptidase (3.6%)" GO:0006508 (25.2%) GO:0005829 (25.2%) "GO:0070573 (25.2%) GO:0046872 (24.3%)" proteolysis (25.2%) cytosol (25.2%) "metallodipeptidase activity (25.2%) metal ion binding (24.3%)" "IPR001160 (33.7%) IPR002933 (33.7%) IPR011650 (31.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.7%) Peptidase M20 (33.7%) Peptidase M20, dimerisation domain (31.3%)" KIVVTGVEMFR Bacillota Bacteria Bacillati Bacillota 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (22.8%) "GO:0003746 (22.8%) GO:0005525 (22.8%) GO:0003924 (18.8%)" cytosol (22.8%) "translation elongation factor activity (22.8%) GTP binding (22.8%) GTPase activity (18.8%)" "IPR004161 (9.3%) IPR009000 (9.3%) IPR050055 (9.3%)" "Translation elongation factor EFTu-like, domain 2 (9.3%) Translation protein, beta-barrel domain superfamily (9.3%) Elongation factor Tu GTPase (9.3%)" DIADAVTAAGVEVAKSEVR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (19.8%) GO:0002181 (0.1%) GO:0032259 (0.1%)" "GO:0005840 (20.1%) GO:1990904 (19.7%) GO:0022625 (0.2%)" "GO:0003735 (19.9%) GO:0019843 (19.7%) GO:0008168 (0.1%)" "translation (19.8%) cytoplasmic translation (0.1%) methylation (0.1%)" "ribosome (20.1%) ribonucleoprotein complex (19.7%) cytosolic large ribosomal subunit (0.2%)" "structural constituent of ribosome (19.9%) rRNA binding (19.7%) methyltransferase activity (0.1%)" "IPR020069 (14.4%) IPR020594 (14.4%) IPR036791 (14.4%)" "Large ribosomal subunit protein bL9, C-terminal (14.4%) Large ribosomal subunit protein bL9, bacteria/chloroplast (14.4%) Large ribosomal subunit protein bL9, C-terminal domain superfamily (14.4%)" GKIIGIDLGTTNSCVSVFEGNEPVVIANSEGKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005524 (33.5%) GO:0140662 (33.5%) GO:0051082 (33%)" "ATP binding (33.5%) ATP-dependent protein folding chaperone (33.5%) unfolded protein binding (33%)" "IPR013126 (16.8%) IPR018181 (16.8%) IPR043129 (16.8%)" "Heat shock protein 70 family (16.8%) Heat shock protein 70, conserved site (16.8%) ATPase, nucleotide binding domain (16.8%)" IYQQEYSCGHPLYSVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (14.2%) GO:0006261 (10.2%)" "GO:0005737 (10.7%) GO:0005694 (10.2%)" "GO:0003677 (14.7%) GO:0005524 (14.7%) GO:0034335 (10.2%)" "DNA topological change (14.2%) DNA-templated DNA replication (10.2%)" "cytoplasm (10.7%) chromosome (10.2%)" "DNA binding (14.7%) ATP binding (14.7%) DNA negative supercoiling activity (10.2%)" "IPR036890 (8.4%) IPR000565 (8.1%) IPR001241 (8.1%)" "Histidine kinase/HSP90-like ATPase superfamily (8.4%) DNA topoisomerase, type IIA, subunit B (8.1%) DNA topoisomerase, type IIA (8.1%)" FVEDGPQGTIK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (17.1%) "GO:0005840 (17.1%) GO:1990904 (17%) GO:0005737 (16.3%)" "GO:0003735 (17.1%) GO:0019843 (15.2%)" translation (17.1%) "ribosome (17.1%) ribonucleoprotein complex (17%) cytoplasm (16.3%)" "structural constituent of ribosome (17.1%) rRNA binding (15.2%)" "IPR000630 (34.8%) IPR035987 (34.8%) IPR047863 (30.3%)" "Small ribosomal subunit protein uS8 (34.8%) Small ribosomal subunit protein uS8 superfamily (34.8%) Small ribosomal subunit protein uS8, conserved site (30.3%)" ASVEDWETMIDTNNK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.1.1.298 (49.9%) 1.1.1.381 (49.8%) 1.1.1.- (0.2%)" "3-hydroxypropionate dehydrogenase (NADP(+)) (49.9%) 3-hydroxy acid dehydrogenase (49.8%) With NAD(+) or NADP(+) as acceptor (0.2%)" "GO:0006212 (0.1%) GO:0051289 (0.1%)" "GO:0005829 (49.2%) GO:0032991 (0.1%)" "GO:0035527 (31.9%) GO:0016616 (17.8%) GO:0016491 (0.3%)" "uracil catabolic process (0.1%) protein homotetramerization (0.1%)" "cytosol (49.2%) protein-containing complex (0.1%)" "3-hydroxypropionate dehydrogenase (NADP+) activity (31.9%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (17.8%) oxidoreductase activity (0.3%)" "IPR002347 (33.4%) IPR036291 (33.4%) IPR020904 (33.2%)" "Short-chain dehydrogenase/reductase SDR (33.4%) NAD(P)-binding domain superfamily (33.4%) Short-chain dehydrogenase/reductase, conserved site (33.2%)" GKVPMNIVAQR root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.5%) GO:0043335 (12.4%) GO:0051083 (12.4%)" "GO:0005737 (12%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003755 (12.5%) GO:0043022 (12.4%) GO:0044183 (12.4%)" "protein transport (12.5%) protein unfolding (12.4%) 'de novo' cotranslational protein folding (12.4%)" "cytoplasm (12%) cytosol (0%) membrane (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.5%) ribosome binding (12.4%) protein folding chaperone (12.4%)" "IPR008881 (12.8%) IPR036611 (12.8%) IPR005215 (12.7%)" "Trigger factor, ribosome-binding, bacterial (12.8%) Trigger factor ribosome-binding domain superfamily (12.8%) Trigger factor (12.7%)" KLTAANGRPVADNQNVQTVGPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" GO:0005737 (16.7%) "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16.7%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" cytoplasm (16.7%) "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16.7%)" "IPR002226 (12.5%) IPR010582 (12.5%) IPR011614 (12.5%)" "Catalase haem-binding site (12.5%) Catalase immune-responsive domain (12.5%) Catalase core domain (12.5%)" DGKQVETNEDNVINETYPLWTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005524 (24.6%) GO:0016887 (24.6%) GO:0051082 (24.6%)" "ATP binding (24.6%) ATP hydrolysis activity (24.6%) unfolded protein binding (24.6%)" "IPR001404 (20.4%) IPR020568 (20.4%) IPR019805 (19.7%)" "Heat shock protein Hsp90 family (20.4%) Ribosomal protein uS5 domain 2-type superfamily (20.4%) Heat shock protein Hsp90, conserved site (19.7%)" IDVEKNEGMRGEEMVISTPDSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" HNAIDFALWK root 6.1.1.16 (100%) cysteine--tRNA ligase (100%) GO:0006423 (20%) "GO:0005829 (18.8%) GO:0005737 (1.3%)" "GO:0004817 (20%) GO:0005524 (20%) GO:0008270 (18.8%)" cysteinyl-tRNA aminoacylation (20%) "cytosol (18.8%) cytoplasm (1.3%)" "cysteine-tRNA ligase activity (20%) ATP binding (20%) zinc ion binding (18.8%)" "IPR009080 (14.5%) IPR014729 (14.5%) IPR015273 (14.5%)" "Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (14.5%) Rossmann-like alpha/beta/alpha sandwich fold (14.5%) Cysteinyl-tRNA synthetase, class Ia, DALR (14.5%)" HLGCQSGIILTASHNPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.2 (62.5%) 5.4.2.- (31.3%) 5.4.2.8 (6.3%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (62.5%) Phosphotransferases (phosphomutases) (31.3%) phosphomannomutase (6.3%)" "GO:0005975 (24.1%) GO:0006166 (24.1%)" "GO:0000287 (24.1%) GO:0008973 (24.1%) GO:0004614 (3.4%)" "carbohydrate metabolic process (24.1%) purine ribonucleoside salvage (24.1%)" "magnesium ion binding (24.1%) phosphopentomutase activity (24.1%) phosphoglucomutase activity (3.4%)" "IPR005844 (13%) IPR016055 (13%) IPR016066 (13%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (13%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (13%) Alpha-D-phosphohexomutase, conserved site (13%)" TASGLYIASNAQEKPQR Actinomycetota Bacteria Bacillati Actinomycetota GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0044183 (16.7%) GO:0046872 (16.7%)" cytoplasm (16.7%) "ATP binding (16.7%) protein folding chaperone (16.7%) metal ion binding (16.7%)" "IPR011032 (25%) IPR018369 (25%) IPR020818 (25%)" "GroES-like superfamily (25%) Chaperonin GroES, conserved site (25%) GroES chaperonin family (25%)" DYVSVSEFEGTPVLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" VWANPDFANKELGWK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR036291 (34.2%) IPR005886 (32.9%) IPR001509 (30.4%)" "NAD(P)-binding domain superfamily (34.2%) UDP-glucose 4-epimerase (32.9%) NAD-dependent epimerase/dehydratase (30.4%)" VLDGLGIAIISTSK root GO:0006412 (16.7%) "GO:0005840 (16.7%) GO:1990904 (16.7%) GO:0005737 (12.1%)" "GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "ribosome (16.7%) ribonucleoprotein complex (16.7%) cytoplasm (12.1%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR000630 (33.3%) IPR035987 (33.3%) IPR047863 (33.3%)" "Small ribosomal subunit protein uS8 (33.3%) Small ribosomal subunit protein uS8 superfamily (33.3%) Small ribosomal subunit protein uS8, conserved site (33.3%)" MGGQMGGDRVTVQNLQVLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" IYAEDPENNFMPSPGVIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "6.3.4.14 (70%) 6.4.1.7 (20%) 6.4.1.2 (10%)" "biotin carboxylase (70%) 2-oxoglutarate carboxylase (20%) acetyl-CoA carboxylase (10%)" GO:2001295 (16.7%) "GO:0005524 (22.2%) GO:0046872 (22.2%) GO:0003989 (16.7%)" malonyl-CoA biosynthetic process (16.7%) "ATP binding (22.2%) metal ion binding (22.2%) acetyl-CoA carboxylase activity (16.7%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" FCVPNKEVMPER Pseudomonadati Bacteria Pseudomonadati 4.4.1.21 (100%) S-ribosylhomocysteine lyase (100%) "GO:0009372 (32.2%) GO:0019284 (0.2%) GO:2000145 (0.2%)" "GO:0016020 (0.5%) GO:0005829 (0.2%)" "GO:0005506 (32.2%) GO:0043768 (32.2%) GO:0016787 (1.7%)" "quorum sensing (32.2%) L-methionine salvage from S-adenosylmethionine (0.2%) regulation of cell motility (0.2%)" "membrane (0.5%) cytosol (0.2%)" "iron ion binding (32.2%) S-ribosylhomocysteine lyase activity (32.2%) hydrolase activity (1.7%)" "IPR003815 (33.3%) IPR011249 (33.3%) IPR037005 (33.3%)" "S-ribosylhomocysteinase (LuxS) (33.3%) Metalloenzyme, LuxS/M16 peptidase-like (33.3%) S-ribosylhomocysteinase (LuxS) superfamily (33.3%)" KNAAVLAQALIDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (14.9%) GO:0035999 (14.9%) GO:0032259 (12.6%)" GO:0005829 (14.9%) "GO:0004372 (14.9%) GO:0030170 (14.9%) GO:0008168 (12.6%)" "glycine biosynthetic process from serine (14.9%) tetrahydrofolate interconversion (14.9%) methylation (12.6%)" cytosol (14.9%) "glycine hydroxymethyltransferase activity (14.9%) pyridoxal phosphate binding (14.9%) methyltransferase activity (12.6%)" "IPR001085 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Serine hydroxymethyltransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" FLPDKAIDLMDEAAAR root "GO:0034605 (18.2%) GO:0042026 (14.3%) GO:0006508 (6.3%)" "GO:0005737 (18.2%) GO:0005840 (0%)" "GO:0005524 (18.3%) GO:0016887 (18.2%) GO:0008233 (6.3%)" "cellular response to heat (18.2%) protein refolding (14.3%) proteolysis (6.3%)" "cytoplasm (18.2%) ribosome (0%)" "ATP binding (18.3%) ATP hydrolysis activity (18.2%) peptidase activity (6.3%)" "IPR003593 (8.5%) IPR003959 (8.5%) IPR027417 (8.5%)" "AAA+ ATPase domain (8.5%) ATPase, AAA-type, core (8.5%) P-loop containing nucleoside triphosphate hydrolase (8.5%)" TLHNSTDVDTVKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.5.1.75 (100%) tRNA dimethylallyltransferase (100%) GO:0006400 (33.2%) "GO:0005524 (33.2%) GO:0052381 (33.2%) GO:0016740 (0.5%)" tRNA modification (33.2%) "ATP binding (33.2%) tRNA dimethylallyltransferase activity (33.2%) transferase activity (0.5%)" "IPR018022 (33.3%) IPR027417 (33.3%) IPR039657 (33.3%)" "IPP transferase (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%) Dimethylallyltransferase (33.3%)" TVIHEEVSKEELGGAMTHSSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.-.-.- (100%) Ligases (100%) GO:0015977 (22.8%) GO:0009317 (22.8%) "GO:0003989 (22.8%) GO:0004658 (22.8%) GO:0016740 (8.7%)" carbon fixation (22.8%) acetyl-CoA carboxylase complex (22.8%) "acetyl-CoA carboxylase activity (22.8%) propionyl-CoA carboxylase activity (22.8%) transferase activity (8.7%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" LQFVGDDLLVTNPAR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.4%) "GO:0000015 (16.4%) GO:0005576 (16.4%) GO:0009986 (15.8%)" "GO:0000287 (16.4%) GO:0004634 (16.4%) GO:0002020 (0.9%)" glycolytic process (16.4%) "phosphopyruvate hydratase complex (16.4%) extracellular region (16.4%) cell surface (15.8%)" "magnesium ion binding (16.4%) phosphopyruvate hydratase activity (16.4%) protease binding (0.9%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" TNCTLVFSTGQALLAAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (17.7%) GO:0006098 (16.2%) GO:0042182 (14.6%)" GO:0005737 (17.7%) "GO:0016832 (17.7%) GO:0004801 (16.2%)" "carbohydrate metabolic process (17.7%) pentose-phosphate shunt (16.2%) ketone catabolic process (14.6%)" cytoplasm (17.7%) "aldehyde-lyase activity (17.7%) transaldolase activity (16.2%)" "IPR001585 (17.2%) IPR013785 (17.2%) IPR018225 (17.2%)" "Transaldolase/Fructose-6-phosphate aldolase (17.2%) Aldolase-type TIM barrel (17.2%) Transaldolase, active site (17.2%)" IYYESNTYLEGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.19 (100%) arginine--tRNA ligase (100%) GO:0006420 (24.9%) GO:0005737 (24.9%) "GO:0004814 (24.9%) GO:0005524 (24.9%) GO:0016874 (0.4%)" arginyl-tRNA aminoacylation (24.9%) cytoplasm (24.9%) "arginine-tRNA ligase activity (24.9%) ATP binding (24.9%) ligase activity (0.4%)" "IPR001278 (12.6%) IPR001412 (12.6%) IPR035684 (12.6%)" "Arginine-tRNA ligase (12.6%) Aminoacyl-tRNA synthetase, class I, conserved site (12.6%) Arginyl-tRNA synthetase, catalytic core domain (12.6%)" SVVDGDKEIVFSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0000977 (50%) GO:0032422 (50%)" "RNA polymerase II transcription regulatory region sequence-specific DNA binding (50%) purine-rich negative regulatory element binding (50%)" IPR006628 (100%) Purine-rich element binding protein family (100%) IEENKDNLPYLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (46.7%) IPR019734 (46.7%) IPR013105 (6.7%)" "Tetratricopeptide-like helical domain superfamily (46.7%) Tetratricopeptide repeat (46.7%) Tetratricopeptide repeat 2 (6.7%)" LYSNSHLEELLLEFEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006089 (33.8%) "GO:0046872 (33.1%) GO:0051539 (33.1%)" lactate metabolic process (33.8%) "metal ion binding (33.1%) 4 iron, 4 sulfur cluster binding (33.1%)" "IPR003741 (13.8%) IPR004452 (13.8%) IPR009051 (13.5%)" "LUD domain (13.8%) L-lactate oxidation iron-sulfur protein LutB/LldF (13.8%) Alpha-helical ferredoxin (13.5%)" NKYDICVLDVMMPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (17.7%) IPR001867 (17.7%) IPR011006 (17.7%)" "Signal transduction response regulator, receiver domain (17.7%) OmpR/PhoB-type DNA-binding domain (17.7%) CheY-like superfamily (17.7%)" FYDSLPTTGSEGGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" VFNHTGKPQAAKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.15 (100%) glutamate decarboxylase (100%) GO:0006538 (24.6%) GO:0005829 (24.6%) "GO:0004351 (24.6%) GO:0030170 (24.6%) GO:0016829 (1.6%)" L-glutamate catabolic process (24.6%) cytosol (24.6%) "glutamate decarboxylase activity (24.6%) pyridoxal phosphate binding (24.6%) lyase activity (1.6%)" "IPR002129 (25%) IPR010107 (25%) IPR015421 (25%)" "Pyridoxal phosphate-dependent decarboxylase (25%) Glutamate decarboxylase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%)" KAVYQVEVADLR TTTAINQAFTQSPYLKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR025411 (100%) Domain of unknown function DUF4136 (100%) IIAEANAQKDTILKDAEAEAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis AELIEALADKTGLQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" EKINPAGAPTYVPGEYK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.4%) GO:0043335 (12%) GO:0051083 (12%)" "GO:0005737 (11.3%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0003755 (12.4%) GO:0043022 (12%) GO:0044183 (12%)" "protein transport (12.4%) protein unfolding (12%) 'de novo' cotranslational protein folding (12%)" "cytoplasm (11.3%) cytosol (0.1%) membrane (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (12.4%) ribosome binding (12%) protein folding chaperone (12%)" "IPR008881 (13.1%) IPR036611 (13.1%) IPR005215 (12.8%)" "Trigger factor, ribosome-binding, bacterial (13.1%) Trigger factor ribosome-binding domain superfamily (13.1%) Trigger factor (12.8%)" VIGFSDASTTSSSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006520 (16.8%) GO:0006207 (15.9%) GO:0044205 (15.9%)" GO:0005829 (16.8%) "GO:0016597 (16.8%) GO:0004070 (15.9%) GO:0016743 (0.9%)" "amino acid metabolic process (16.8%) 'de novo' pyrimidine nucleobase biosynthetic process (15.9%) 'de novo' UMP biosynthetic process (15.9%)" cytosol (16.8%) "amino acid binding (16.8%) aspartate carbamoyltransferase activity (15.9%) carboxyl- or carbamoyltransferase activity (0.9%)" "IPR006130 (20.4%) IPR006132 (20.4%) IPR036901 (20.4%)" "Aspartate/ornithine carbamoyltransferase (20.4%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20.4%) Aspartate/ornithine carbamoyltransferase superfamily (20.4%)" DKDAVSACTLLAEICAWAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.2.2 (60%) 5.4.2.- (40%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (60%) Phosphotransferases (phosphomutases) (40%)" "GO:0005975 (24.2%) GO:0006166 (24.2%)" "GO:0000287 (24.2%) GO:0008973 (24.2%) GO:0004614 (3.3%)" "carbohydrate metabolic process (24.2%) purine ribonucleoside salvage (24.2%)" "magnesium ion binding (24.2%) phosphopentomutase activity (24.2%) phosphoglucomutase activity (3.3%)" "IPR005841 (12.6%) IPR005844 (12.6%) IPR005845 (12.6%)" "Alpha-D-phosphohexomutase superfamily (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.6%)" IETGVIHVGDEIEILGLGEDKKSVVTGVEMFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20.4%) "GO:0003746 (20.4%) GO:0003924 (20.4%) GO:0005525 (20.4%)" cytosol (20.4%) "translation elongation factor activity (20.4%) GTPase activity (20.4%) GTP binding (20.4%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" DAAAALFEKEGMEIPFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" GLILDEIEEFKTQNVSNIIQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0016208 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) AMP binding (9.1%)" "IPR000023 (16.7%) IPR012003 (16.7%) IPR012828 (16.7%)" "Phosphofructokinase domain (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic (16.7%)" VMNDIQRPFTAIMGGSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" LATNDNLAEGSAFNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" ELAAFSQFASDLDDATRK root "7.1.2.2 (96.8%) 3.6.3.14 (3.1%) 3.6.3.- (0.1%)" "H(+)-transporting two-sector ATPase (96.8%) Transferred entry: 7.1.2.2 (3.1%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (0.1%)" "GO:0015986 (0.1%) GO:0042777 (0%)" "GO:0045259 (19.1%) GO:0005886 (18.6%) GO:0005739 (0%)" "GO:0005524 (19.1%) GO:0046933 (19.1%) GO:0043531 (19%)" "proton motive force-driven ATP synthesis (0.1%) proton motive force-driven plasma membrane ATP synthesis (0%)" "proton-transporting ATP synthase complex (19.1%) plasma membrane (18.6%) mitochondrion (0%)" "ATP binding (19.1%) proton-transporting ATP synthase activity, rotational mechanism (19.1%) ADP binding (19%)" "IPR000793 (10.2%) IPR005294 (10.2%) IPR038376 (10.2%)" "ATP synthase, alpha subunit, C-terminal (10.2%) ATP synthase, F1 complex, alpha subunit (10.2%) ATP synthase, alpha subunit, C-terminal domain superfamily (10.2%)" DIEIPADWDGRDIFLRLEGAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25.3%) GO:0009341 (25.3%) "GO:0004565 (25.3%) GO:0030246 (24.1%)" lactose catabolic process (25.3%) beta-galactosidase complex (25.3%) "beta-galactosidase activity (25.3%) carbohydrate binding (24.1%)" "IPR006104 (7.3%) IPR008979 (7.3%) IPR050347 (7.3%)" "Glycosyl hydrolases family 2, sugar binding domain (7.3%) Galactose-binding-like domain superfamily (7.3%) Bacterial Beta-galactosidase (7.3%)" QLGIEFSGPGAK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006950 (1.1%) GO:0042594 (1.1%) GO:0045893 (1.1%)" "GO:0005737 (89.1%) GO:0005829 (1.1%)" "GO:0016740 (3.3%) GO:0004364 (2.2%) GO:0016853 (1.1%)" "response to stress (1.1%) response to starvation (1.1%) positive regulation of DNA-templated transcription (1.1%)" "cytoplasm (89.1%) cytosol (1.1%)" "transferase activity (3.3%) glutathione transferase activity (2.2%) isomerase activity (1.1%)" "IPR004046 (11.5%) IPR010987 (11.5%) IPR036282 (11.5%)" "Glutathione S-transferase, C-terminal (11.5%) Glutathione S-transferase, C-terminal-like (11.5%) Glutathione S-transferase, C-terminal domain superfamily (11.5%)" VFAGPNHDHAAQNPEVLNFK Romboutsia Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Romboutsia "GO:0006412 (20%) GO:0017148 (20%)" GO:0022625 (20%) "GO:0003729 (20%) GO:0003735 (20%)" "translation (20%) negative regulation of translation (20%)" cytosolic large ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%)" "IPR005822 (33.3%) IPR005823 (33.3%) IPR036899 (33.3%)" "Large ribosomal subunit protein uL13 (33.3%) Large ribosomal subunit protein uL13, bacteria (33.3%) Large ribosomal subunit protein uL13 superfamily (33.3%)" TVGRNDPCPCGSGK Bacteria Bacteria "7.4.2.8 (99.6%) 3.4.11.18 (0.4%)" "protein-secreting ATPase (99.6%) methionyl aminopeptidase (0.4%)" "GO:0017038 (11.1%) GO:0006605 (11%) GO:0043952 (11%)" "GO:0005886 (11%) GO:0031522 (11%) GO:0005829 (10.9%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0004386 (0.4%)" "protein import (11.1%) protein targeting (11%) protein transport by the Sec complex (11%)" "plasma membrane (11%) cell envelope Sec protein transport complex (11%) cytosol (10.9%)" "ATP binding (11%) metal ion binding (11%) helicase activity (0.4%)" "IPR004027 (9.2%) IPR011116 (7.6%) IPR036266 (7.6%)" "SEC-C motif (9.2%) SecA Wing/Scaffold (7.6%) SecA, Wing/Scaffold superfamily (7.6%)" NALEDAEMSPEEVDYINVHGTSTPVGDISEAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" GLLISEVVEKGPFDHAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.21.- (100%) Serine endopeptidases (100%) GO:0006508 (33.3%) GO:0005737 (33.3%) GO:0008236 (33.3%) proteolysis (33.3%) cytoplasm (33.3%) serine-type peptidase activity (33.3%) "IPR005151 (13.8%) IPR011042 (13.8%) IPR011659 (13.8%)" "Tail specific protease (13.8%) Six-bladed beta-propeller, TolB-like (13.8%) WD40-like beta-propeller (13.8%)" DLSDVTLGQFAGKR Bacteria Bacteria "1.11.1.24 (92.1%) 1.11.1.- (7.3%) 1.11.1.15 (0.7%)" "thioredoxin-dependent peroxiredoxin (92.1%) Peroxidases (7.3%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (0.7%)" GO:0034599 (46.2%) "GO:0005829 (0.4%) GO:0042597 (0.4%)" "GO:0008379 (48.7%) GO:0004601 (3.9%) GO:0032843 (0.4%)" cellular response to oxidative stress (46.2%) "cytosol (0.4%) periplasmic space (0.4%)" "thioredoxin peroxidase activity (48.7%) peroxidase activity (3.9%) hydroperoxide reductase activity (0.4%)" "IPR036249 (17%) IPR050455 (16.9%) IPR013740 (16.8%)" "Thioredoxin-like superfamily (17%) Thiol Peroxidase Tpx Subfamily (16.9%) Redoxin (16.8%)" HVDPAAAIQQGK root "1.3.5.1 (99.2%) 1.3.99.1 (0.5%) 1.3.5.4 (0.2%)" "succinate dehydrogenase (99.2%) Deleted entry (0.5%) Transferred entry: 1.3.5.1 (0.2%)" "GO:0009061 (11.2%) GO:0006099 (11.1%) GO:0006113 (0%)" "GO:0005886 (10.8%) GO:0045283 (0%) GO:0005829 (0%)" "GO:0046872 (11.3%) GO:0051539 (11.3%) GO:0051537 (11.1%)" "anaerobic respiration (11.2%) tricarboxylic acid cycle (11.1%) fermentation (0%)" "plasma membrane (10.8%) fumarate reductase complex (0%) cytosol (0%)" "metal ion binding (11.3%) 4 iron, 4 sulfur cluster binding (11.3%) 2 iron, 2 sulfur cluster binding (11.1%)" "IPR009051 (11.4%) IPR004489 (11.2%) IPR017896 (11.2%)" "Alpha-helical ferredoxin (11.4%) Succinate dehydrogenase/fumarate reductase iron-sulphur protein (11.2%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (11.2%)" RVINEPTAAALAYGLDK root "3.6.4.10 (99.7%) 2.4.2.1 (0.3%)" "non-chaperonin molecular chaperone ATPase (99.7%) purine-nucleoside phosphorylase (0.3%)" "GO:0016226 (1.5%) GO:0030218 (1.3%) GO:0045647 (1.3%)" "GO:0005759 (14.1%) GO:0042645 (1.2%) GO:0005737 (0.8%)" "GO:0005524 (23.8%) GO:0140662 (23.8%) GO:0051082 (19%)" "iron-sulfur cluster assembly (1.5%) erythrocyte differentiation (1.3%) negative regulation of erythrocyte differentiation (1.3%)" "mitochondrial matrix (14.1%) mitochondrial nucleoid (1.2%) cytoplasm (0.8%)" "ATP binding (23.8%) ATP-dependent protein folding chaperone (23.8%) unfolded protein binding (19%)" "IPR013126 (17.6%) IPR018181 (17.6%) IPR043129 (17.5%)" "Heat shock protein 70 family (17.6%) Heat shock protein 70, conserved site (17.6%) ATPase, nucleotide binding domain (17.5%)" IVNEPTAAALAYGIDKAHK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0042026 (0.3%) GO:0051085 (0.3%)" GO:0005737 (1.5%) "GO:0005524 (32.4%) GO:0051082 (32.4%) GO:0140662 (32.4%)" "protein refolding (0.3%) obsolete chaperone cofactor-dependent protein refolding (0.3%)" cytoplasm (1.5%) "ATP binding (32.4%) unfolded protein binding (32.4%) ATP-dependent protein folding chaperone (32.4%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" EMDEDKVAAFVAR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales VLETAKEVYENR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0042254 (29.6%) "GO:0005525 (29.6%) GO:0043022 (29.6%) GO:0016787 (11.1%)" ribosome biogenesis (29.6%) "GTP binding (29.6%) ribosome binding (29.6%) hydrolase activity (11.1%)" "IPR005225 (14.3%) IPR006073 (14.3%) IPR015946 (14.3%)" "Small GTP-binding domain (14.3%) GTP binding domain (14.3%) K homology domain-like, alpha/beta (14.3%)" YTSTNTPEGMPMDFEAMSNPVHILK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR012910 (12.9%) IPR023996 (12.9%) IPR023997 (12.9%)" "TonB-dependent receptor, plug domain (12.9%) TonB-dependent outer membrane protein, SusC/RagA (12.9%) TonB-dependent outer membrane protein SusC/RagA, conserved site (12.9%)" ITDKEVQINIFEVKRPELDAVIVANNIAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20.2%) GO:0022627 (20.2%) "GO:0003735 (20.2%) GO:0019843 (20.2%) GO:0003729 (19.3%)" translation (20.2%) cytosolic small ribosomal subunit (20.2%) "structural constituent of ribosome (20.2%) rRNA binding (20.2%) mRNA binding (19.3%)" "IPR001351 (11.2%) IPR004044 (11.2%) IPR004087 (11.2%)" "Small ribosomal subunit protein uS3, C-terminal (11.2%) K Homology domain, type 2 (11.2%) K Homology domain (11.2%)" TLCVAEVSNMGCTAEAVDLFIEHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.4.1.4 (80%) 1.4.1.2 (20%)" "glutamate dehydrogenase (NADP(+)) (80%) glutamate dehydrogenase (20%)" GO:0006537 (25.3%) "GO:0005829 (24.2%) GO:0009986 (1.1%)" "GO:0004354 (25.3%) GO:0000166 (23.1%) GO:0004352 (1.1%)" glutamate biosynthetic process (25.3%) "cytosol (24.2%) cell surface (1.1%)" "glutamate dehydrogenase (NADP+) activity (25.3%) nucleotide binding (23.1%) glutamate dehydrogenase (NAD+) activity (1.1%)" "IPR006095 (12.5%) IPR006096 (12.5%) IPR006097 (12.5%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.5%)" EIVHNPSYDVLFAEETKPSLEGFEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.5%) GO:0005829 (18.5%) "GO:0004612 (18.5%) GO:0005524 (18.5%) GO:0046872 (18.5%)" gluconeogenesis (18.5%) cytosol (18.5%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.5%) ATP binding (18.5%) metal ion binding (18.5%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" VLDGAVMVYCAVGGVQPQSETVWR root "3.6.5.- (50%) 3.6.5.3 (50%)" "Acting on GTP; involved in cellular and subcellular movement (50%) protein-synthesizing GTPase (50%)" "GO:0032790 (17.7%) GO:0006412 (0.5%) GO:0070125 (0%)" "GO:0005737 (14.4%) GO:0005829 (0%) GO:0005739 (0%)" "GO:0003924 (17.7%) GO:0005525 (17.7%) GO:0003746 (17.5%)" "ribosome disassembly (17.7%) translation (0.5%) mitochondrial translational elongation (0%)" "cytoplasm (14.4%) cytosol (0%) mitochondrion (0%)" "GTPase activity (17.7%) GTP binding (17.7%) translation elongation factor activity (17.5%)" "IPR000795 (7.2%) IPR027417 (7.2%) IPR005225 (7.2%)" "Translational (tr)-type GTP-binding domain (7.2%) P-loop containing nucleoside triphosphate hydrolase (7.2%) Small GTP-binding domain (7.2%)" KGDIAFVVEGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.4.2.19 (100%) nicotinate-nucleotide diphosphorylase (carboxylating) (100%) "GO:0009435 (25%) GO:0034213 (25%)" GO:0005737 (25%) GO:0004514 (25%) "NAD+ biosynthetic process (25%) quinolinate catabolic process (25%)" cytoplasm (25%) nicotinate-nucleotide diphosphorylase (carboxylating) activity (25%) "IPR002638 (14.3%) IPR004393 (14.3%) IPR013785 (14.3%)" "Quinolinate phosphoribosyl transferase, C-terminal (14.3%) Nicotinate-nucleotide pyrophosphorylase (14.3%) Aldolase-type TIM barrel (14.3%)" AGEKIDVEVPVFVEGTPK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.4%)" "GO:0003735 (24.9%) GO:0008097 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.4%)" "structural constituent of ribosome (24.9%) 5S rRNA binding (24.9%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" TQSAFSEGGLIIGAGLEDLGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006879 (25%) GO:0005737 (25%) "GO:0008198 (25%) GO:0051537 (25%)" intracellular iron ion homeostasis (25%) cytoplasm (25%) "ferrous iron binding (25%) 2 iron, 2 sulfur cluster binding (25%)" SVCTSINDVVCHGIPSSTEILK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.11.18 (100%) methionyl aminopeptidase (100%) GO:0006508 (25%) "GO:0004239 (25%) GO:0046914 (25%) GO:0070006 (25%)" proteolysis (25%) "initiator methionyl aminopeptidase activity (25%) transition metal ion binding (25%) metalloaminopeptidase activity (25%)" "IPR000994 (25%) IPR001714 (25%) IPR002467 (25%)" "Peptidase M24 (25%) Peptidase M24, methionine aminopeptidase (25%) Peptidase M24A, methionine aminopeptidase, subfamily 1 (25%)" LILLQPATATDNSAIPYAIDR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (51.3%) GO:0046872 (48.7%)" "alkaline phosphatase activity (51.3%) metal ion binding (48.7%)" "IPR001952 (34.5%) IPR017850 (34.5%) IPR018299 (31%)" "Alkaline phosphatase (34.5%) Alkaline-phosphatase-like, core domain superfamily (34.5%) Alkaline phosphatase, active site (31%)" ILNSGDCFAGISDEELMEKNPLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.21 (100%) histidine--tRNA ligase (100%) GO:0006427 (25%) GO:0005737 (25%) "GO:0004821 (25%) GO:0005524 (25%)" histidyl-tRNA aminoacylation (25%) cytoplasm (25%) "histidine-tRNA ligase activity (25%) ATP binding (25%)" "IPR004154 (12.5%) IPR004516 (12.5%) IPR006195 (12.5%)" "Anticodon-binding (12.5%) Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit (12.5%) Aminoacyl-tRNA synthetase, class II (12.5%)" YMGHVEELYSTEEYKQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.5%) GO:0009090 (17.5%) GO:0009088 (12.3%)" GO:0005829 (17.5%) "GO:0004072 (17.5%) GO:0005524 (17.5%)" "lysine biosynthetic process via diaminopimelate (17.5%) homoserine biosynthetic process (17.5%) threonine biosynthetic process (12.3%)" cytosol (17.5%) "aspartate kinase activity (17.5%) ATP binding (17.5%)" "IPR001048 (14.3%) IPR001341 (14.3%) IPR005260 (14.3%)" "Aspartate/glutamate/uridylate kinase (14.3%) Aspartate kinase (14.3%) Aspartate kinase, monofunctional class (14.3%)" GKTPNCDVIIGTPFTHLASVAAAIDTNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" GQPAVILMSGLQGSGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20.3%) "GO:0048500 (15.4%) GO:0005786 (4.9%)" "GO:0003924 (20.3%) GO:0005525 (20.3%) GO:0008312 (18.9%)" SRP-dependent cotranslational protein targeting to membrane (20.3%) "signal recognition particle (15.4%) signal recognition particle, endoplasmic reticulum targeting (4.9%)" "GTPase activity (20.3%) GTP binding (20.3%) 7S RNA binding (18.9%)" "IPR000897 (11.4%) IPR003593 (11.4%) IPR022941 (11.4%)" "Signal recognition particle, SRP54 subunit, GTPase domain (11.4%) AAA+ ATPase domain (11.4%) Signal recognition particle, SRP54 subunit (11.4%)" NVLEEEQYVPLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (25%) "GO:0036440 (21.4%) GO:0046912 (3.6%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (25%) "citrate synthase activity (21.4%) acyltransferase activity, acyl groups converted into alkyl on transfer (3.6%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" YGINHISTGDVLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.7.4.3 (98.6%) 2.7.4.- (1.4%)" "adenylate kinase (98.6%) Phosphotransferases with a phosphate group as acceptor (1.4%)" "GO:0044209 (23.7%) GO:0006139 (0.2%) GO:0009123 (0.2%)" "GO:0005737 (24.9%) GO:0005829 (0.2%)" "GO:0005524 (25.1%) GO:0004017 (24.9%) GO:0004550 (0.2%)" "AMP salvage (23.7%) nucleobase-containing compound metabolic process (0.2%) nucleoside monophosphate metabolic process (0.2%)" "cytoplasm (24.9%) cytosol (0.2%)" "ATP binding (25.1%) AMP kinase activity (24.9%) nucleoside diphosphate kinase activity (0.2%)" "IPR000850 (33%) IPR027417 (33%) IPR033690 (32.7%)" "Adenylate kinase/UMP-CMP kinase (33%) P-loop containing nucleoside triphosphate hydrolase (33%) Adenylate kinase, conserved site (32.7%)" LLNTMDPHAPGTLISNDTEKGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17%) GO:0009090 (17%) GO:0009088 (14.9%)" GO:0005829 (17%) "GO:0004072 (17%) GO:0005524 (17%)" "lysine biosynthetic process via diaminopimelate (17%) homoserine biosynthetic process (17%) threonine biosynthetic process (14.9%)" cytosol (17%) "aspartate kinase activity (17%) ATP binding (17%)" "IPR001048 (12.5%) IPR001341 (12.5%) IPR005260 (12.5%)" "Aspartate/glutamate/uridylate kinase (12.5%) Aspartate kinase (12.5%) Aspartate kinase, monofunctional class (12.5%)" TLESLQALYGHGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (49.6%) "GO:0004332 (49.6%) GO:0016829 (0.8%)" glycolytic process (49.6%) "fructose-bisphosphate aldolase activity (49.6%) lyase activity (0.8%)" "IPR002915 (25.2%) IPR013785 (25.2%) IPR050456 (25.2%)" "DeoC/FbaB/LacD aldolase (25.2%) Aldolase-type TIM barrel (25.2%) DeoC/FbaB aldolase (25.2%)" SAMMYGGTCPNIACVPTKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.16.1.1 (100%) mercury(II) reductase (100%) "GO:0003955 (46.7%) GO:0050660 (46.7%) GO:0016152 (4.4%)" "NAD(P)H dehydrogenase (quinone) activity (46.7%) flavin adenine dinucleotide binding (46.7%) mercury (II) reductase (NADP+) activity (4.4%)" "IPR001100 (20%) IPR004099 (20%) IPR016156 (20%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (20%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (20%) FAD/NAD-linked reductase, dimerisation domain superfamily (20%)" SQIHGMVHCSGGAQTK root 6.3.3.1 (100%) phosphoribosylformylglycinamidine cyclo-ligase (100%) "GO:0006189 (16.6%) GO:0046084 (16.6%)" GO:0005829 (16.6%) "GO:0004637 (16.6%) GO:0004641 (16.6%) GO:0005524 (16.6%)" "'de novo' IMP biosynthetic process (16.6%) adenine biosynthetic process (16.6%)" cytosol (16.6%) "phosphoribosylamine-glycine ligase activity (16.6%) phosphoribosylformylglycinamidine cyclo-ligase activity (16.6%) ATP binding (16.6%)" "IPR004733 (18.9%) IPR010918 (18.9%) IPR016188 (18.9%)" "Phosphoribosylformylglycinamidine cyclo-ligase (18.9%) PurM-like, C-terminal domain (18.9%) PurM-like, N-terminal domain (18.9%)" FRLPQLYMER Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "2.3.1.47 (66.7%) 2.3.1.50 (33.3%)" "8-amino-7-oxononanoate synthase (66.7%) serine C-palmitoyltransferase (33.3%)" "GO:0030170 (48.5%) GO:0008483 (21.2%) GO:0016740 (21.2%)" "pyridoxal phosphate binding (48.5%) transaminase activity (21.2%) transferase activity (21.2%)" "IPR004839 (16.8%) IPR015421 (16.8%) IPR015422 (16.8%)" "Aminotransferase, class I/classII, large domain (16.8%) Pyridoxal phosphate-dependent transferase, major domain (16.8%) Pyridoxal phosphate-dependent transferase, small domain (16.8%)" IMDDIIDLELEKIER Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20.3%) GO:0009263 (16.6%)" "GO:0004748 (21%) GO:0031419 (21%) GO:0005524 (16.6%)" "DNA biosynthetic process (20.3%) deoxyribonucleotide biosynthetic process (16.6%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (21%) cobalamin binding (21%) ATP binding (16.6%)" "IPR000788 (26.4%) IPR050862 (26.4%) IPR013344 (26.2%)" "Ribonucleotide reductase large subunit, C-terminal (26.4%) Ribonucleoside diphosphate reductase class-2 (26.4%) Ribonucleotide reductase, adenosylcobalamin-dependent (26.2%)" MKNTPVDYQTAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.6.1.- (80%) 2.6.1.83 (20%)" "Transaminases (80%) LL-diaminopimelate aminotransferase (20%)" GO:0006520 (33.3%) "GO:0030170 (33.3%) GO:0008483 (32.1%) GO:0010285 (1.2%)" amino acid metabolic process (33.3%) "pyridoxal phosphate binding (33.3%) transaminase activity (32.1%) L,L-diaminopimelate aminotransferase activity (1.2%)" "IPR004839 (25%) IPR015421 (25%) IPR015424 (25%)" "Aminotransferase, class I/classII, large domain (25%) Pyridoxal phosphate-dependent transferase, major domain (25%) Pyridoxal phosphate-dependent transferase (25%)" KTDLSRDEFLK Bacteria Bacteria 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (20.1%) GO:0005829 (20.1%) "GO:0004832 (20.1%) GO:0005524 (20.1%) GO:0002161 (19.8%)" valyl-tRNA aminoacylation (20.1%) cytosol (20.1%) "valine-tRNA ligase activity (20.1%) ATP binding (20.1%) aminoacyl-tRNA deacylase activity (19.8%)" "IPR002300 (9.3%) IPR002303 (9.3%) IPR014729 (9.3%)" "Aminoacyl-tRNA synthetase, class Ia (9.3%) Valine-tRNA ligase (9.3%) Rossmann-like alpha/beta/alpha sandwich fold (9.3%)" YDSEADSISITHDAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.17.1.8 (100%) 4-hydroxy-tetrahydrodipicolinate reductase (100%) "GO:0009089 (18.8%) GO:0019877 (18.8%)" GO:0005829 (18.8%) "GO:0008839 (18.8%) GO:0016726 (8.1%) GO:0050661 (8.1%)" "lysine biosynthetic process via diaminopimelate (18.8%) diaminopimelate biosynthetic process (18.8%)" cytosol (18.8%) "4-hydroxy-tetrahydrodipicolinate reductase (18.8%) oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor (8.1%) NADP binding (8.1%)" "IPR022663 (25.4%) IPR023940 (25.4%) IPR000846 (24.6%)" "Dihydrodipicolinate reductase, C-terminal (25.4%) Dihydrodipicolinate reductase (25.4%) Dihydrodipicolinate reductase, N-terminal (24.6%)" MVEQILADLQKAQPDWSIALLR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (32%) GO:0005829 (32%) "GO:0003978 (32%) GO:0016853 (4%)" galactose metabolic process (32%) cytosol (32%) "UDP-glucose 4-epimerase activity (32%) isomerase activity (4%)" "IPR005886 (33.3%) IPR036291 (33.3%) IPR001509 (26.7%)" "UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD-dependent epimerase/dehydratase (26.7%)" IGSDAYNQGLSERR Bacteria Bacteria "GO:0034220 (16.6%) GO:0006811 (7.6%) GO:0006974 (0.2%)" "GO:0009279 (25%) GO:0046930 (24.2%) GO:0016020 (0.2%)" "GO:0015288 (24.2%) GO:0005509 (0.6%) GO:0015075 (0.2%)" "monoatomic ion transmembrane transport (16.6%) monoatomic ion transport (7.6%) DNA damage response (0.2%)" "cell outer membrane (25%) pore complex (24.2%) membrane (0.2%)" "porin activity (24.2%) calcium ion binding (0.6%) monoatomic ion transmembrane transporter activity (0.2%)" "IPR006664 (12.9%) IPR006665 (12.9%) IPR036737 (12.9%)" "Outer membrane protein, bacterial (12.9%) OmpA-like domain (12.9%) OmpA-like domain superfamily (12.9%)" AYFAEVLPSYDRER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR041218 (25%) IPR049280 (25%) IPR049281 (25%)" "Domain of unknown function DUF5606 (25%) Domain of unknown function DUF6852 (25%) BVU_3817-like, C-terminal domain superfamily (25%)" GGRGASQNIIPSSTGAAK root "1.2.1.- (87.2%) 1.2.1.12 (12.7%) 2.7.2.3 (0.1%)" "With NAD(+) or NADP(+) as acceptor (87.2%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (12.7%) phosphoglycerate kinase (0.1%)" "GO:0006006 (18.3%) GO:0072524 (9.3%) GO:0006096 (3.2%)" "GO:0005829 (2.1%) GO:0005737 (0.5%) GO:0032991 (0.4%)" "GO:0051287 (21.9%) GO:0050661 (18.3%) GO:0004365 (14.9%)" "glucose metabolic process (18.3%) pyridine-containing compound metabolic process (9.3%) glycolytic process (3.2%)" "cytosol (2.1%) cytoplasm (0.5%) protein-containing complex (0.4%)" "NAD binding (21.9%) NADP binding (18.3%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (14.9%)" "IPR020829 (17.7%) IPR020831 (17.7%) IPR020830 (17.4%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.7%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.7%) Glyceraldehyde 3-phosphate dehydrogenase, active site (17.4%)" QGTLSGVSGFQVHLGSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.3 (50%) 1.2.7.11 (33.3%) 1.2.-.- (16.7%)" "2-oxoglutarate synthase (50%) 2-oxoacid oxidoreductase (ferredoxin) (33.3%) Acting on the aldehyde or oxo group of donors (16.7%)" GO:0006979 (50%) "GO:0016903 (48.4%) GO:0047553 (1.6%)" response to oxidative stress (50%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors (48.4%) 2-oxoglutarate synthase activity (1.6%)" "IPR002869 (12.6%) IPR002880 (12.6%) IPR009014 (12.6%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.6%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.6%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.6%)" ALTVSDLQSGSTQPAQGAAPVITVTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) LRVDPVNFK root "GO:0042744 (8.8%) GO:0000122 (0.2%) GO:0043249 (0.2%)" "GO:0005833 (9.3%) GO:0031838 (8.9%) GO:0072562 (8.7%)" "GO:0005344 (9.3%) GO:0019825 (9.3%) GO:0020037 (9.3%)" "hydrogen peroxide catabolic process (8.8%) negative regulation of transcription by RNA polymerase II (0.2%) erythrocyte maturation (0.2%)" "hemoglobin complex (9.3%) haptoglobin-hemoglobin complex (8.9%) blood microparticle (8.7%)" "oxygen carrier activity (9.3%) oxygen binding (9.3%) heme binding (9.3%)" "IPR000971 (17%) IPR009050 (17%) IPR012292 (17%)" "Globin (17%) Globin-like superfamily (17%) Globin/Protoglobin (17%)" INYGSEIVHNTK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) GO:0004565 (50%) carbohydrate metabolic process (50%) beta-galactosidase activity (50%) "IPR001944 (12.5%) IPR008979 (12.5%) IPR017853 (12.5%)" "Glycoside hydrolase, family 35 (12.5%) Galactose-binding-like domain superfamily (12.5%) Glycoside hydrolase superfamily (12.5%)" GIQYTDGMIPEGVFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0044718 (2.4%) GO:0009279 (92.9%) "GO:0004180 (2.4%) GO:0015344 (2.4%)" siderophore transmembrane transport (2.4%) cell outer membrane (92.9%) "carboxypeptidase activity (2.4%) siderophore uptake transmembrane transporter activity (2.4%)" "IPR039426 (14.9%) IPR012910 (14.6%) IPR023996 (14.6%)" "TonB-dependent receptor-like (14.9%) TonB-dependent receptor, plug domain (14.6%) TonB-dependent outer membrane protein, SusC/RagA (14.6%)" NGMTAFVEYEVEDGALDIMHTIVPPPLEGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016740 (100%) transferase activity (100%) "IPR016181 (33.3%) IPR031165 (33.3%) IPR045057 (33.3%)" "Acyl-CoA N-acyltransferase (33.3%) Yjdj-type Gcn5-related N-acetyltransferase (33.3%) Gcn5-related N-acetyltransferase (33.3%)" KNNEIPAVLYGGEKVTHFTVTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" VYLADHDVTTELVPTER Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.4%) GO:0006516 (19.4%)" GO:0005829 (19.4%) "GO:0000224 (19.4%) GO:0030246 (19.4%) GO:0016798 (3.2%)" "carbohydrate metabolic process (19.4%) glycoprotein catabolic process (19.4%)" cytosol (19.4%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.4%) carbohydrate binding (19.4%) hydrolase activity, acting on glycosyl bonds (3.2%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" TAILNANYLAACLKDTYGIVYR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR015421 (14.4%) IPR015422 (14.4%) IPR015424 (14.4%)" "Pyridoxal phosphate-dependent transferase, major domain (14.4%) Pyridoxal phosphate-dependent transferase, small domain (14.4%) Pyridoxal phosphate-dependent transferase (14.4%)" DIEKPFLMPVEDVFSITGR Cryomorpha ignava Bacteria Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Cryomorphaceae Cryomorpha Cryomorpha ignava 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (14.3%) GO:0032045 (14.3%)" "GO:0000287 (14.3%) GO:0003746 (14.3%) GO:0003924 (14.3%)" "cytosol (14.3%) guanyl-nucleotide exchange factor complex (14.3%)" "magnesium ion binding (14.3%) translation elongation factor activity (14.3%) GTPase activity (14.3%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" ANSTAPAINVIESDKDYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" IGATIMANACGPCIGQWKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" HTTKPLMGHFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.2%)" "GO:0003735 (24.9%) GO:0019843 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.2%)" "structural constituent of ribosome (24.9%) rRNA binding (24.9%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" NAEFLQAYGVAIADGPLKGLAAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.11.1.24 (97.7%) 1.11.1.- (2.3%)" "thioredoxin-dependent peroxiredoxin (97.7%) Peroxidases (2.3%)" GO:0034599 (46.7%) "GO:0005829 (0.6%) GO:0042597 (0.6%)" "GO:0008379 (49.1%) GO:0004601 (2.4%) GO:0032843 (0.6%)" cellular response to oxidative stress (46.7%) "cytosol (0.6%) periplasmic space (0.6%)" "thioredoxin peroxidase activity (49.1%) peroxidase activity (2.4%) hydroperoxide reductase activity (0.6%)" "IPR013740 (16.8%) IPR036249 (16.8%) IPR050455 (16.8%)" "Redoxin (16.8%) Thioredoxin-like superfamily (16.8%) Thiol Peroxidase Tpx Subfamily (16.8%)" GAVSFAMNVAEILR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.25 (100%) 4-alpha-glucanotransferase (100%) GO:0005980 (33.1%) GO:0016020 (0.8%) "GO:0004134 (33.1%) GO:0004135 (33.1%)" glycogen catabolic process (33.1%) membrane (0.8%) "4-alpha-glucanotransferase activity (33.1%) amylo-alpha-1,6-glucosidase activity (33.1%)" "IPR008928 (20%) IPR010401 (20%) IPR012341 (20%)" "Six-hairpin glycosidase superfamily (20%) Glycogen debranching enzyme (20%) Six-hairpin glycosidase-like superfamily (20%)" GDIGNTSAMYAR Bacteroidota Bacteria Pseudomonadati Bacteroidota 4.1.1.23 (100%) orotidine-5'-phosphate decarboxylase (100%) "GO:0006207 (33.2%) GO:0044205 (32.5%) GO:0009220 (0.7%)" "GO:0004590 (33.2%) GO:0016829 (0.5%)" "'de novo' pyrimidine nucleobase biosynthetic process (33.2%) 'de novo' UMP biosynthetic process (32.5%) pyrimidine ribonucleotide biosynthetic process (0.7%)" "orotidine-5'-phosphate decarboxylase activity (33.2%) lyase activity (0.5%)" "IPR001754 (25%) IPR011060 (25%) IPR011995 (25%)" "Orotidine 5'-phosphate decarboxylase domain (25%) Ribulose-phosphate binding barrel (25%) Orotidine 5'-phosphate decarboxylase, type 2 (25%)" GASQNIIPSSTGAAK root "1.2.1.- (86.4%) 1.2.1.12 (13.5%) 2.7.2.3 (0.1%)" "With NAD(+) or NADP(+) as acceptor (86.4%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (13.5%) phosphoglycerate kinase (0.1%)" "GO:0006006 (18.2%) GO:0072524 (9.2%) GO:0006096 (3.4%)" "GO:0005829 (2.3%) GO:0005737 (0.5%) GO:0032991 (0.4%)" "GO:0051287 (21.8%) GO:0050661 (18.2%) GO:0004365 (15%)" "glucose metabolic process (18.2%) pyridine-containing compound metabolic process (9.2%) glycolytic process (3.4%)" "cytosol (2.3%) cytoplasm (0.5%) protein-containing complex (0.4%)" "NAD binding (21.8%) NADP binding (18.2%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (15%)" "IPR020829 (17.7%) IPR020831 (17.7%) IPR020830 (17.4%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.7%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.7%) Glyceraldehyde 3-phosphate dehydrogenase, active site (17.4%)" CTTDHISMAGPWLR root "4.2.1.3 (99.9%) 4.2.1.33 (0.1%)" "aconitate hydratase (99.9%) 3-isopropylmalate dehydratase (0.1%)" GO:0006099 (19.9%) "GO:0005829 (19.9%) GO:0005739 (0.4%)" "GO:0003994 (19.9%) GO:0051539 (19.9%) GO:0046872 (19.8%)" tricarboxylic acid cycle (19.9%) "cytosol (19.9%) mitochondrion (0.4%)" "aconitate hydratase activity (19.9%) 4 iron, 4 sulfur cluster binding (19.9%) metal ion binding (19.8%)" "IPR050926 (11.2%) IPR000573 (11.2%) IPR015928 (11.2%)" "Aconitase/IPM Isomerase (11.2%) Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.2%) Aconitase/3-isopropylmalate dehydratase, swivel (11.2%)" FSGDMDPVTALTIDKGQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "7.1.2.2 (98.4%) 3.6.3.14 (1.6%)" "H(+)-transporting two-sector ATPase (98.4%) Transferred entry: 7.1.2.2 (1.6%)" "GO:0045259 (17.8%) GO:0005886 (17.5%)" "GO:0005524 (17.8%) GO:0043531 (17.8%) GO:0046933 (17.8%)" "proton-transporting ATP synthase complex (17.8%) plasma membrane (17.5%)" "ATP binding (17.8%) ADP binding (17.8%) proton-transporting ATP synthase activity, rotational mechanism (17.8%)" "IPR000194 (10%) IPR000793 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) ATP synthase, alpha subunit, C-terminal (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" EAYPGDIFYLHSR root "7.1.2.2 (97%) 3.6.3.14 (2.9%) 3.6.3.15 (0.1%)" "H(+)-transporting two-sector ATPase (97%) Transferred entry: 7.1.2.2 (2.9%) Transferred entry: 7.2.2.1 (0.1%)" "GO:0015986 (0.1%) GO:0000902 (0%) GO:0002098 (0%)" "GO:0045259 (19.4%) GO:0005886 (15.7%) GO:0009535 (0.8%)" "GO:0005524 (19.4%) GO:0046933 (19.4%) GO:0043531 (19.3%)" "proton motive force-driven ATP synthesis (0.1%) cell morphogenesis (0%) tRNA wobble uridine modification (0%)" "proton-transporting ATP synthase complex (19.4%) plasma membrane (15.7%) chloroplast thylakoid membrane (0.8%)" "ATP binding (19.4%) proton-transporting ATP synthase activity, rotational mechanism (19.4%) ADP binding (19.3%)" "IPR000194 (10.3%) IPR005294 (10.3%) IPR027417 (10.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.3%) ATP synthase, F1 complex, alpha subunit (10.3%) P-loop containing nucleoside triphosphate hydrolase (10.3%)" TASVQDIHASDYER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.2.1.54 (75%) 3.2.1.135 (25%)" "cyclomaltodextrinase (75%) neopullulanase (25%)" GO:0005975 (49.2%) "GO:0016798 (41.5%) GO:0047798 (7.7%) GO:0031216 (1.5%)" carbohydrate metabolic process (49.2%) "hydrolase activity, acting on glycosyl bonds (41.5%) cyclomaltodextrinase activity (7.7%) neopullulanase activity (1.5%)" "IPR006047 (15.1%) IPR017853 (14.6%) IPR019492 (14.6%)" "Glycosyl hydrolase family 13, catalytic domain (15.1%) Glycoside hydrolase superfamily (14.6%) Cyclo-malto-dextrinase, C-terminal (14.6%)" AVAAVNGPIAQALIGKDAK root "4.2.1.11 (99.4%) 6.3.4.2 (0.6%)" "phosphopyruvate hydratase (99.4%) CTP synthase (glutamine hydrolyzing) (0.6%)" "GO:0006096 (16.8%) GO:0006396 (0.1%) GO:0006401 (0.1%)" "GO:0000015 (16.8%) GO:0005576 (16.4%) GO:0009986 (14.4%)" "GO:0000287 (16.8%) GO:0004634 (16.8%) GO:0016829 (0.3%)" "glycolytic process (16.8%) RNA processing (0.1%) RNA catabolic process (0.1%)" "phosphopyruvate hydratase complex (16.8%) extracellular region (16.4%) cell surface (14.4%)" "magnesium ion binding (16.8%) phosphopyruvate hydratase activity (16.8%) lyase activity (0.3%)" "IPR000941 (17.1%) IPR020811 (17.1%) IPR029017 (17.1%)" "Enolase (17.1%) Enolase, N-terminal (17.1%) Enolase-like, N-terminal (17.1%)" EVLLSIEDIYNQHPEFEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.4.1.4 (82.4%) 1.4.1.2 (17.6%)" "glutamate dehydrogenase (NADP(+)) (82.4%) glutamate dehydrogenase (17.6%)" GO:0006537 (25.3%) "GO:0005829 (25.3%) GO:0009986 (0.4%)" "GO:0004354 (25.3%) GO:0000166 (22.7%) GO:0004352 (0.8%)" glutamate biosynthetic process (25.3%) "cytosol (25.3%) cell surface (0.4%)" "glutamate dehydrogenase (NADP+) activity (25.3%) nucleotide binding (22.7%) glutamate dehydrogenase (NAD+) activity (0.8%)" "IPR046346 (11.4%) IPR006097 (11.3%) IPR033524 (11.3%)" "Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.4%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.3%) Leu/Phe/Val dehydrogenases active site (11.3%)" GIVSEGMILSAENFDGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.8%) "GO:0005829 (16.2%) GO:0005737 (0.6%)" "GO:0000049 (16.8%) GO:0004825 (16.8%) GO:0005524 (16.8%)" methionyl-tRNA aminoacylation (16.8%) "cytosol (16.2%) cytoplasm (0.6%)" "tRNA binding (16.8%) methionine-tRNA ligase activity (16.8%) ATP binding (16.8%)" "IPR002547 (8.5%) IPR004495 (8.5%) IPR012340 (8.5%)" "tRNA-binding domain (8.5%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.5%) Nucleic acid-binding, OB-fold (8.5%)" FTGFHRLEK root 1.11.1.- (100%) Peroxidases (100%) "GO:0006979 (0.1%) GO:0009411 (0.1%) GO:0009636 (0.1%)" "GO:0042597 (93.4%) GO:0030313 (3.3%) GO:0016020 (1.5%)" "GO:0004601 (0.1%) GO:0005381 (0.1%) GO:0020037 (0.1%)" "response to oxidative stress (0.1%) response to UV (0.1%) response to toxic substance (0.1%)" "periplasmic space (93.4%) cell envelope (3.3%) membrane (1.5%)" "peroxidase activity (0.1%) iron ion transmembrane transporter activity (0.1%) heme binding (0.1%)" "IPR018976 (14.6%) IPR034981 (14.6%) IPR038352 (14.6%)" "Imelysin-like domain (14.6%) EfeO/Algp7, imelysin-like domain (14.6%) Imelysin-like domain superfamily (14.6%)" IGVAAENCADKEKGAYTGEVSAAMVASTGAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" DAAILVPYFYNEGCELIGDVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR008969 (33.3%) IPR024620 (33.3%) IPR053968 (33.3%)" "Carboxypeptidase-like, regulatory domain superfamily (33.3%) Domain of unknown function DUF3869 (33.3%) BF9343_1606-like, C-terminal (33.3%)" VHSSCMTGDIFGSCR Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.5.4.25 (50%) 4.1.99.12 (50%)" "GTP cyclohydrolase II (50%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (50%)" GO:0009231 (12.6%) GO:0005829 (12.6%) "GO:0003935 (12.6%) GO:0005525 (12.6%) GO:0000287 (12.4%)" riboflavin biosynthetic process (12.6%) cytosol (12.6%) "GTP cyclohydrolase II activity (12.6%) GTP binding (12.6%) magnesium ion binding (12.4%)" "IPR000926 (16.8%) IPR017945 (16.8%) IPR032677 (16.8%)" "GTP cyclohydrolase II, RibA (16.8%) DHBP synthase RibB-like alpha/beta domain superfamily (16.8%) GTP cyclohydrolase II (16.8%)" LIIEELLEDGSDPDALYTIEHHLSADDLETLEK root "GO:0006402 (0.3%) GO:0060699 (0.3%)" "GO:0005737 (33%) GO:0005829 (0.3%)" "GO:0019899 (32.7%) GO:0060698 (32.7%) GO:0008428 (0.3%)" "mRNA catabolic process (0.3%) regulation of endoribonuclease activity (0.3%)" "cytoplasm (33%) cytosol (0.3%)" "enzyme binding (32.7%) endoribonuclease inhibitor activity (32.7%) ribonuclease inhibitor activity (0.3%)" "IPR009671 (33.6%) IPR036701 (33.6%) IPR016716 (32.9%)" "Regulator of ribonuclease activity B domain (33.6%) RraB-like superfamily (33.6%) Regulator of ribonuclease activity B (32.9%)" ILDGAVAAYCAVGGVEPQSETVWR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0032790 (20.1%) GO:0005737 (19.4%) "GO:0003746 (20.1%) GO:0003924 (20.1%) GO:0005525 (20.1%)" ribosome disassembly (20.1%) cytoplasm (19.4%) "translation elongation factor activity (20.1%) GTPase activity (20.1%) GTP binding (20.1%)" "IPR000795 (6.3%) IPR005225 (6.3%) IPR027417 (6.3%)" "Translational (tr)-type GTP-binding domain (6.3%) Small GTP-binding domain (6.3%) P-loop containing nucleoside triphosphate hydrolase (6.3%)" EAIDMTTAGHLLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" VGSTFTPVGFNPILER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (26.7%) GO:0003863 (5%) GO:0016491 (1.7%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (26.7%) branched-chain 2-oxo acid dehydrogenase activity (5%) oxidoreductase activity (1.7%)" "IPR005475 (20.2%) IPR009014 (20.2%) IPR029061 (20.2%)" "Transketolase-like, pyrimidine-binding domain (20.2%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20.2%) Thiamin diphosphate-binding fold (20.2%)" INDNQVIEGAESR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.3.1.117 (100%) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (100%) "GO:0009089 (19.8%) GO:0019877 (19.8%) GO:0009085 (0.1%)" "GO:0005737 (19.4%) GO:0005829 (0.1%)" "GO:0008666 (20.3%) GO:0016779 (19.7%) GO:0016746 (0.5%)" "lysine biosynthetic process via diaminopimelate (19.8%) diaminopimelate biosynthetic process (19.8%) lysine biosynthetic process (0.1%)" "cytoplasm (19.4%) cytosol (0.1%)" "2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity (20.3%) nucleotidyltransferase activity (19.7%) acyltransferase activity (0.5%)" "IPR011004 (17.2%) IPR023180 (16.7%) IPR037133 (16.7%)" "Trimeric LpxA-like superfamily (17.2%) Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 (16.7%) Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily (16.7%)" STYLVNTPNFVACHVQAYLHMYDVTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (71.4%) 1.2.7.- (26.2%) 1.2.1.51 (2.4%)" "pyruvate synthase (71.4%) With an iron-sulfur protein as acceptor (26.2%) pyruvate dehydrogenase (NADP(+)) (2.4%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (11.8%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.4%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (11.8%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.4%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" VLSASSYSPDEWER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0046677 (100%) response to antibiotic (100%) "IPR038679 (50%) IPR044854 (50%)" "Signal transduction protein PmrD superfamily (50%) IraM/PmrD (50%)" ELADRYAIVANDVR root "1.16.-.- (99.5%) 1.16.3.1 (0.5%)" "Oxidizing metal ions (99.5%) ferroxidase (0.5%)" "GO:0006879 (14.3%) GO:0030261 (14.3%) GO:0006950 (0.1%)" "GO:0005737 (14.3%) GO:0009295 (13%) GO:0016020 (0.2%)" "GO:0008199 (14.5%) GO:0016722 (14.5%) GO:0003677 (14.4%)" "intracellular iron ion homeostasis (14.3%) chromosome condensation (14.3%) response to stress (0.1%)" "cytoplasm (14.3%) nucleoid (13%) membrane (0.2%)" "ferric iron binding (14.5%) oxidoreductase activity, acting on metal ions (14.5%) DNA binding (14.4%)" "IPR002177 (16.7%) IPR008331 (16.7%) IPR009078 (16.7%)" "DNA-binding protein Dps (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like superfamily (16.7%)" VQQLSLKTGAPIIALNDSGGAR Phocaeicola plebeius Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola plebeius GO:0015977 (20%) GO:0009317 (20%) "GO:0003989 (20%) GO:0004658 (20%) GO:0016740 (20%)" carbon fixation (20%) acetyl-CoA carboxylase complex (20%) "acetyl-CoA carboxylase activity (20%) propionyl-CoA carboxylase activity (20%) transferase activity (20%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" LSNIQEVLPILEQIVQQGK Clostridium neuense Bacteria Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium neuense ALPSQPEIYLCYPSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.1.1.72 (100%) acetylxylan esterase (100%) GO:0045493 (21.3%) "GO:0016788 (53.2%) GO:0016798 (21.3%) GO:0046555 (4.3%)" xylan catabolic process (21.3%) "hydrolase activity, acting on ester bonds (53.2%) hydrolase activity, acting on glycosyl bonds (21.3%) acetylxylan esterase activity (4.3%)" "IPR013830 (20%) IPR029058 (20%) IPR036514 (20%)" "SGNH hydrolase-type esterase domain (20%) Alpha/Beta hydrolase fold (20%) SGNH hydrolase superfamily (20%)" SVTSPVIEVHISNVHAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.10 (100%) 3-dehydroquinate dehydratase (100%) "GO:0008652 (20%) GO:0009073 (20%) GO:0009423 (20%)" GO:0003855 (20%) "amino acid biosynthetic process (20%) aromatic amino acid family biosynthetic process (20%) chorismate biosynthetic process (20%)" 3-dehydroquinate dehydratase activity (20%) "IPR001874 (33.3%) IPR018509 (33.3%) IPR036441 (33.3%)" "Dehydroquinase, class II (33.3%) Dehydroquinase, class II, conserved site (33.3%) Dehydroquinase, class II superfamily (33.3%)" EIADNTSILYGGSCKPSNAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%) GO:0019563 (16.5%)" "GO:0005829 (16.5%) GO:0016020 (0.6%)" GO:0004807 (16.5%) "gluconeogenesis (16.5%) glycolytic process (16.5%) glycerol catabolic process (16.5%)" "cytosol (16.5%) membrane (0.6%)" triose-phosphate isomerase activity (16.5%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" ITYTEPGLKGDTATNTLKPATVESGATVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0043043 (32.9%) "GO:0005829 (31.6%) GO:0005737 (1.3%)" GO:0003746 (34.2%) peptide biosynthetic process (32.9%) "cytosol (31.6%) cytoplasm (1.3%)" translation elongation factor activity (34.2%) "IPR001059 (11.1%) IPR008991 (11.1%) IPR011768 (11.1%)" "Translation elongation factor P/YeiP, central (11.1%) Translation protein SH3-like domain superfamily (11.1%) Translation elongation factor P (11.1%)" DFGSFENFKK root "1.15.1.1 (99.2%) 4.2.99.18 (0.8%)" "superoxide dismutase (99.2%) DNA-(apurinic or apyrimidinic site) lyase (0.8%)" GO:0006284 (0.5%) "GO:0005737 (30.6%) GO:0005739 (0.8%)" "GO:0004784 (33.1%) GO:0046872 (32.8%) GO:0030145 (0.8%)" base-excision repair (0.5%) "cytoplasm (30.6%) mitochondrion (0.8%)" "superoxide dismutase activity (33.1%) metal ion binding (32.8%) manganese ion binding (0.8%)" "IPR019832 (16.5%) IPR001189 (16.4%) IPR019831 (16.4%)" "Manganese/iron superoxide dismutase, C-terminal (16.5%) Manganese/iron superoxide dismutase (16.4%) Manganese/iron superoxide dismutase, N-terminal (16.4%)" LNRKDYSTER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25.9%) "GO:0022627 (25.9%) GO:0005840 (0.2%)" "GO:0003735 (25.9%) GO:0019843 (22%)" translation (25.9%) "cytosolic small ribosomal subunit (25.9%) ribosome (0.2%)" "structural constituent of ribosome (25.9%) rRNA binding (22%)" "IPR000589 (33.3%) IPR005290 (33.3%) IPR009068 (33.3%)" "Small ribosomal subunit protein uS15 (33.3%) Small ribosomal subunit protein uS15, bacteria (33.3%) uS15/NS1, RNA-binding domain superfamily (33.3%)" TTVFVKDLNDFATVNATYEAFFTEHNATFPAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "3.5.4.- (83.6%) 3.5.99.10 (14.9%) 2.5.1.7 (1.5%)" "In cyclic amidines (83.6%) 2-iminobutanoate/2-iminopropanoate deaminase (14.9%) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (1.5%)" "GO:0009097 (0.4%) GO:0009636 (0.4%) GO:0070207 (0.1%)" "GO:0005829 (49%) GO:0016020 (0.1%) GO:0032991 (0.1%)" "GO:0019239 (48.5%) GO:0120242 (0.4%) GO:0120243 (0.4%)" "isoleucine biosynthetic process (0.4%) response to toxic substance (0.4%) protein homotrimerization (0.1%)" "cytosol (49%) membrane (0.1%) protein-containing complex (0.1%)" "deaminase activity (48.5%) 2-iminobutanoate deaminase activity (0.4%) 2-iminopropanoate deaminase activity (0.4%)" "IPR006175 (25.2%) IPR035959 (25.2%) IPR006056 (24.9%)" "YjgF/YER057c/UK114 family (25.2%) RutC-like superfamily (25.2%) RidA family (24.9%)" VAVLGAAGGIGQALALLLK root "1.1.1.37 (99.9%) 1.-.-.- (0.1%) 1.1.1.- (0.1%)" "malate dehydrogenase (99.9%) Oxidoreductases (0.1%) With NAD(+) or NADP(+) as acceptor (0.1%)" "GO:0006099 (25%) GO:0006108 (23.1%) GO:0019752 (1.5%)" "GO:0005737 (25%) GO:0016020 (0.1%) GO:0005829 (0%)" "GO:0030060 (25.1%) GO:0016491 (0.1%) GO:0016615 (0%)" "tricarboxylic acid cycle (25%) malate metabolic process (23.1%) carboxylic acid metabolic process (1.5%)" "cytoplasm (25%) membrane (0.1%) cytosol (0%)" "L-malate dehydrogenase (NAD+) activity (25.1%) oxidoreductase activity (0.1%) malate dehydrogenase activity (0%)" "IPR036291 (12.8%) IPR001236 (12.8%) IPR010097 (12.5%)" "NAD(P)-binding domain superfamily (12.8%) Lactate/malate dehydrogenase, N-terminal (12.8%) Malate dehydrogenase, type 1 (12.5%)" LEVVTPEENMGDVIGDLNKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.5%) GO:0005737 (18.5%) "GO:0003746 (20.7%) GO:0005525 (20.5%) GO:0003924 (19.8%)" ribosome disassembly (20.5%) cytoplasm (18.5%) "translation elongation factor activity (20.7%) GTP binding (20.5%) GTPase activity (19.8%)" "IPR000640 (6.4%) IPR005517 (6.4%) IPR014721 (6.4%)" "Elongation factor EFG, domain V-like (6.4%) Translation elongation factor EFG/EF2, domain IV (6.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.4%)" SIAPFAEDKHTDPAVVCIDSTGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.1.1.133 (80%) 2.1.1.- (15%) 2.1.1.271 (5%)" "precorrin-4 C(11)-methyltransferase (80%) Methyltransferases (15%) cobalt-precorrin-4 methyltransferase (5%)" "GO:0009236 (33.3%) GO:0032259 (33.3%)" GO:0046026 (33.3%) "cobalamin biosynthetic process (33.3%) methylation (33.3%)" precorrin-4 C11-methyltransferase activity (33.3%) "IPR000878 (8.3%) IPR002750 (8.3%) IPR003043 (8.3%)" "Tetrapyrrole methylase (8.3%) CobE/GbiG C-terminal domain (8.3%) Uroporphiryn-III C-methyltransferase, conserved site (8.3%)" MLENEDKTELIEAFYKDLEFGTGGLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.2.2 (83.3%) 5.4.2.- (16.7%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (83.3%) Phosphotransferases (phosphomutases) (16.7%)" "GO:0005975 (23.8%) GO:0006166 (23.8%)" "GO:0000287 (23.8%) GO:0008973 (23.8%) GO:0004614 (4.8%)" "carbohydrate metabolic process (23.8%) purine ribonucleoside salvage (23.8%)" "magnesium ion binding (23.8%) phosphopentomutase activity (23.8%) phosphoglucomutase activity (4.8%)" "IPR005841 (12.6%) IPR005844 (12.6%) IPR005845 (12.6%)" "Alpha-D-phosphohexomutase superfamily (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.6%)" AQQTPLYEQHTLCGAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (14.7%) GO:0032259 (11.5%) GO:0006546 (0.4%)" "GO:0005829 (15.7%) GO:0005960 (15.1%)" "GO:0004047 (15.4%) GO:0008483 (15.4%) GO:0008168 (11.5%)" "glycine decarboxylation via glycine cleavage system (14.7%) methylation (11.5%) glycine catabolic process (0.4%)" "cytosol (15.7%) glycine cleavage complex (15.1%)" "aminomethyltransferase activity (15.4%) transaminase activity (15.4%) methyltransferase activity (11.5%)" "IPR027266 (14.8%) IPR006222 (14.7%) IPR028896 (14.7%)" "Aminomethyltransferase superfamily (14.8%) GCVT, N-terminal domain (14.7%) Aminomethyltransferase-like (14.7%)" VDSDVIDHLIAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005524 (24.4%) GO:0016887 (24.4%) GO:0051082 (24.4%)" "ATP binding (24.4%) ATP hydrolysis activity (24.4%) unfolded protein binding (24.4%)" "IPR001404 (20.4%) IPR020568 (20.4%) IPR019805 (19.4%)" "Heat shock protein Hsp90 family (20.4%) Ribosomal protein uS5 domain 2-type superfamily (20.4%) Heat shock protein Hsp90, conserved site (19.4%)" GKSPALDACPQRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20%) GO:0015935 (20%) "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) small ribosomal subunit (20%) "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR005679 (33.3%) IPR006032 (33.3%) IPR012340 (33.3%)" "Ribosomal protein uS12, bacteria (33.3%) Small ribosomal subunit protein uS12 (33.3%) Nucleic acid-binding, OB-fold (33.3%)" EQIIFPEIDYDKVDR root "GO:0006412 (16.6%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (16.9%) GO:1990904 (16.6%) GO:0022625 (0.1%)" "GO:0003735 (16.6%) GO:0000049 (16.5%) GO:0019843 (16.5%)" "translation (16.6%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (16.9%) ribonucleoprotein complex (16.6%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (16.6%) tRNA binding (16.5%) rRNA binding (16.5%)" "IPR022803 (17%) IPR031309 (17%) IPR002132 (17%)" "Large ribosomal subunit protein uL5 domain superfamily (17%) Large ribosomal subunit protein uL5, C-terminal (17%) Large ribosomal subunit protein uL5 (17%)" IKPFKNQAFKNGEFIEITEKDTEGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.11.1.26 (97.8%) 1.11.1.15 (2.2%)" "NADH-dependent peroxiredoxin (97.8%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (2.2%)" "GO:0006979 (14.6%) GO:0042744 (14.6%) GO:0045454 (14.6%)" "GO:0005829 (14.6%) GO:0005737 (0.2%) GO:0009321 (0.2%)" "GO:0008379 (14.6%) GO:0102039 (10.4%) GO:0004601 (0.7%)" "response to oxidative stress (14.6%) hydrogen peroxide catabolic process (14.6%) cell redox homeostasis (14.6%)" "cytosol (14.6%) cytoplasm (0.2%) alkyl hydroperoxide reductase complex (0.2%)" "thioredoxin peroxidase activity (14.6%) NADH-dependent peroxiredoxin activity (10.4%) peroxidase activity (0.7%)" "IPR036249 (14.7%) IPR000866 (14.3%) IPR050217 (14.3%)" "Thioredoxin-like superfamily (14.7%) Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (14.3%) Thiol-specific antioxidant peroxiredoxin (14.3%)" DASILELNDLVK Lactobacillaceae Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae GO:0006412 (24.8%) "GO:0022625 (24.3%) GO:0005840 (1.4%) GO:1990904 (0.5%)" "GO:0003735 (24.8%) GO:0003729 (24.3%)" translation (24.8%) "cytosolic large ribosomal subunit (24.3%) ribosome (1.4%) ribonucleoprotein complex (0.5%)" "structural constituent of ribosome (24.8%) mRNA binding (24.3%)" "IPR008932 (20.1%) IPR013823 (20.1%) IPR014719 (20.1%)" "Large ribosomal subunit protein bL12, oligomerization (20.1%) Large ribosomal subunit protein bL12, C-terminal (20.1%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20.1%)" TADDRNPVAYSVFIDPPLSHVGLTEEEAIKR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.16.1.1 (100%) mercury(II) reductase (100%) "GO:0003955 (45.5%) GO:0050660 (45.5%) GO:0016152 (6.1%)" "NAD(P)H dehydrogenase (quinone) activity (45.5%) flavin adenine dinucleotide binding (45.5%) mercury (II) reductase (NADP+) activity (6.1%)" "IPR001100 (20%) IPR004099 (20%) IPR016156 (20%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (20%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (20%) FAD/NAD-linked reductase, dimerisation domain superfamily (20%)" GLNYEYDLTELEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (15.1%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (15.1%)" "IPR001114 (14.8%) IPR027417 (14.8%) IPR033128 (14.8%)" "Adenylosuccinate synthetase (14.8%) P-loop containing nucleoside triphosphate hydrolase (14.8%) Adenylosuccinate synthase, active site (14.8%)" IGLPVRGQSTK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (17%) "GO:0005829 (16.8%) GO:0015935 (16.8%) GO:0005840 (0.2%)" "GO:0003735 (17%) GO:0019843 (16.8%) GO:0000049 (15%)" translation (17%) "cytosol (16.8%) small ribosomal subunit (16.8%) ribosome (0.2%)" "structural constituent of ribosome (17%) rRNA binding (16.8%) tRNA binding (15%)" "IPR001892 (20.2%) IPR018269 (20.2%) IPR010979 (20.1%)" "Small ribosomal subunit protein uS13 (20.2%) Small ribosomal subunit protein uS13, conserved site (20.2%) Small ribosomal subunit protein uS13-like, H2TH (20.1%)" SAFLLGGAEVTTGEGYPGWKPNTDSPVLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" VLEPADRIPGFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.14.12 (100%) Xaa-Xaa-Pro tripeptidyl-peptidase (100%) GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001375 (33.3%) IPR011042 (33.3%) IPR029058 (33.3%)" "Peptidase S9, prolyl oligopeptidase, catalytic domain (33.3%) Six-bladed beta-propeller, TolB-like (33.3%) Alpha/Beta hydrolase fold (33.3%)" AGNFKDAFDFWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (43.8%) IPR019734 (43.8%) IPR013105 (12.5%)" "Tetratricopeptide-like helical domain superfamily (43.8%) Tetratricopeptide repeat (43.8%) Tetratricopeptide repeat 2 (12.5%)" ANRVTKPEAGHFAK root "GO:0006412 (24.8%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (24.8%) GO:0005840 (0.5%) GO:0005737 (0%)" "GO:0003735 (24.9%) GO:0019843 (24.8%)" "translation (24.8%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.8%) ribosome (0.5%) cytoplasm (0%)" "structural constituent of ribosome (24.9%) rRNA binding (24.8%)" "IPR009000 (25%) IPR019927 (25%) IPR000597 (24.7%)" "Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, bacteria/organella (25%) Large ribosomal subunit protein uL3 (24.7%)" LASVMTVPDHCVVGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales LNHTEDIQVALGGAEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.1.1.- (100%) Methyltransferases (100%) GO:0032259 (25.5%) "GO:0005737 (25.5%) GO:0005840 (23.4%)" "GO:0008276 (21.3%) GO:0016279 (4.3%)" methylation (25.5%) "cytoplasm (25.5%) ribosome (23.4%)" "protein methyltransferase activity (21.3%) protein-lysine N-methyltransferase activity (4.3%)" "IPR004498 (33.3%) IPR029063 (33.3%) IPR050078 (33.3%)" "Ribosomal protein L11 methyltransferase (33.3%) S-adenosyl-L-methionine-dependent methyltransferase superfamily (33.3%) Ribosomal protein L11 methyltransferase PrmA (33.3%)" AHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.4.2.9 (100%) uracil phosphoribosyltransferase (100%) "GO:0006223 (16.9%) GO:0044206 (16.8%) GO:0006206 (0%)" "GO:0005737 (15.1%) GO:0005829 (0.1%) GO:0016020 (0%)" "GO:0004845 (17.1%) GO:0005525 (17%) GO:0000287 (16.5%)" "uracil salvage (16.9%) UMP salvage (16.8%) pyrimidine nucleobase metabolic process (0%)" "cytoplasm (15.1%) cytosol (0.1%) membrane (0%)" "uracil phosphoribosyltransferase activity (17.1%) GTP binding (17%) magnesium ion binding (16.5%)" "IPR000836 (20.2%) IPR029057 (20.2%) IPR050054 (20.1%)" "Phosphoribosyltransferase domain (20.2%) Phosphoribosyltransferase-like (20.2%) Uracil phosphoribosyltransferase/Adenine phosphoribosyltransferase (20.1%)" EMGAVCFENTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.4.1.5 (100%) lactoylglutathione lyase (100%) GO:0019243 (30%) GO:0005737 (30%) GO:0004462 (40%) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (30%) cytoplasm (30%) lactoylglutathione lyase activity (40%) "IPR004360 (33.3%) IPR029068 (33.3%) IPR037523 (33.3%)" "Glyoxalase/fosfomycin resistance/dioxygenase domain (33.3%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (33.3%) Vicinal oxygen chelate (VOC), core domain (33.3%)" SVDPSVTEEVNK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) FMDEIKKGTDANEALKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006879 (25%) GO:0005737 (25%) "GO:0008198 (25%) GO:0051537 (25%)" intracellular iron ion homeostasis (25%) cytoplasm (25%) "ferrous iron binding (25%) 2 iron, 2 sulfur cluster binding (25%)" TGDAHLGHVFNDGPADKGGLR Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.8.4.12 (53.3%) 1.8.4.11 (46.7%)" "peptide-methionine (R)-S-oxide reductase (53.3%) peptide-methionine (S)-S-oxide reductase (46.7%)" "GO:0006979 (17.1%) GO:0030091 (17.1%) GO:0034599 (0.5%)" GO:0005737 (17.6%) "GO:0008113 (17.6%) GO:0033743 (17.6%) GO:0033744 (11.8%)" "response to oxidative stress (17.1%) protein repair (17.1%) cellular response to oxidative stress (0.5%)" cytoplasm (17.6%) "peptide-methionine (S)-S-oxide reductase activity (17.6%) peptide-methionine (R)-S-oxide reductase activity (17.6%) L-methionine (S)-S-oxide reductase activity (11.8%)" "IPR002569 (20%) IPR002579 (20%) IPR011057 (20%)" "Peptide methionine sulphoxide reductase MsrA domain (20%) Peptide methionine sulphoxide reductase MrsB domain (20%) Mss4-like superfamily (20%)" MFNSFGNIFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.3.5 (100%) chorismate synthase (100%) "GO:0008652 (16.7%) GO:0009073 (16.7%) GO:0009423 (16.7%)" GO:0005829 (16.7%) "GO:0004107 (16.7%) GO:0010181 (16.7%)" "amino acid biosynthetic process (16.7%) aromatic amino acid family biosynthetic process (16.7%) chorismate biosynthetic process (16.7%)" cytosol (16.7%) "chorismate synthase activity (16.7%) FMN binding (16.7%)" "IPR000453 (33.3%) IPR020541 (33.3%) IPR035904 (33.3%)" "Chorismate synthase (33.3%) Chorismate synthase, conserved site (33.3%) Chorismate synthase AroC superfamily (33.3%)" AGIALTDTFVK root "1.2.1.- (91%) 1.2.1.12 (9%)" "With NAD(+) or NADP(+) as acceptor (91%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (9%)" "GO:0006006 (23%) GO:0006096 (3.8%) GO:0006915 (0.2%)" "GO:0005829 (1.8%) GO:0005737 (0.3%) GO:0005634 (0.2%)" "GO:0051287 (23.1%) GO:0050661 (23%) GO:0004365 (13.7%)" "glucose metabolic process (23%) glycolytic process (3.8%) apoptotic process (0.2%)" "cytosol (1.8%) cytoplasm (0.3%) nucleus (0.2%)" "NAD binding (23.1%) NADP binding (23%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (13.7%)" "IPR020831 (17.1%) IPR020829 (17.1%) IPR020830 (16.6%)" "Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.1%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.1%) Glyceraldehyde 3-phosphate dehydrogenase, active site (16.6%)" YFQSDNAADKLVPEGIEGR root 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (20.3%) GO:0006177 (19.7%) GO:0006164 (0%)" "GO:0005737 (0%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0003938 (20.3%) GO:0046872 (20%) GO:0000166 (19.1%)" "GTP biosynthetic process (20.3%) GMP biosynthetic process (19.7%) purine nucleotide biosynthetic process (0%)" "cytoplasm (0%) cytosol (0%) plasma membrane (0%)" "IMP dehydrogenase activity (20.3%) metal ion binding (20%) nucleotide binding (19.1%)" "IPR001093 (17%) IPR005990 (17%) IPR013785 (17%)" "IMP dehydrogenase/GMP reductase (17%) Inosine-5'-monophosphate dehydrogenase (17%) Aldolase-type TIM barrel (17%)" VRQPLHTVMIPVVDAHQQESIEAVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004822 (14.3%)" isoleucyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) isoleucine-tRNA ligase activity (14.3%)" "IPR002300 (12.5%) IPR002301 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class Ia (12.5%) Isoleucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" IDRFPEQKQPIANTHSR Escherichia coli Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli "IPR005587 (50%) IPR023146 (50%)" "Uncharacterised protein family UPF0304, YfbU (50%) YfbU, alpha-helical bundle domain superfamily (50%)" FICIVTHVADAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.5.1.49 (40%) 4.4.1.11 (40%) 2.5.1.48 (20%)" "O-acetylhomoserine aminocarboxypropyltransferase (40%) methionine gamma-lyase (40%) cystathionine gamma-synthase (20%)" "GO:0006535 (13.8%) GO:0019346 (13.8%) GO:0071269 (13.8%)" GO:0005737 (13.8%) "GO:0003961 (13.8%) GO:0004124 (13.8%) GO:0030170 (13.8%)" "cysteine biosynthetic process from serine (13.8%) transsulfuration (13.8%) L-homocysteine biosynthetic process (13.8%)" cytoplasm (13.8%) "O-acetylhomoserine aminocarboxypropyltransferase activity (13.8%) cysteine synthase activity (13.8%) pyridoxal phosphate binding (13.8%)" "IPR000277 (20%) IPR006235 (20%) IPR015421 (20%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (20%) O-acetylhomoserine/O-acetylserine sulfhydrylase (20%) Pyridoxal phosphate-dependent transferase, major domain (20%)" GLDPNNTMYVLKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0009328 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) phenylalanine-tRNA ligase complex (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002547 (7.7%) IPR004532 (7.7%) IPR005121 (7.7%)" "tRNA-binding domain (7.7%) Phenylalanine-tRNA ligase, class IIc, beta subunit, bacterial type (7.7%) Ferrodoxin-fold anticodon-binding domain (7.7%)" LGEGDEIVLTDGQGSFYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.1.1.193 (100%) 16S rRNA (uracil(1498)-N(3))-methyltransferase (100%) GO:0070475 (33.3%) GO:0005737 (33.3%) GO:0070042 (33.3%) rRNA base methylation (33.3%) cytoplasm (33.3%) rRNA (uridine-N3-)-methyltransferase activity (33.3%) "IPR006700 (16.7%) IPR015947 (16.7%) IPR029026 (16.7%)" "Ribosomal RNA small subunit methyltransferase E (16.7%) PUA-like superfamily (16.7%) tRNA (guanine-N1-)-methyltransferase, N-terminal (16.7%)" TVGRNDPCPCGSGKK Bacteria Bacteria "7.4.2.8 (99.6%) 3.4.11.18 (0.4%)" "protein-secreting ATPase (99.6%) methionyl aminopeptidase (0.4%)" "GO:0017038 (11.1%) GO:0006605 (11%) GO:0043952 (11%)" "GO:0005886 (11%) GO:0031522 (11%) GO:0005829 (10.9%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0004386 (0.4%)" "protein import (11.1%) protein targeting (11%) protein transport by the Sec complex (11%)" "plasma membrane (11%) cell envelope Sec protein transport complex (11%) cytosol (10.9%)" "ATP binding (11%) metal ion binding (11%) helicase activity (0.4%)" "IPR004027 (9.2%) IPR011116 (7.6%) IPR036266 (7.6%)" "SEC-C motif (9.2%) SecA Wing/Scaffold (7.6%) SecA, Wing/Scaffold superfamily (7.6%)" SVTQEEVSKEDLGGADVHTMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.-.-.- (100%) Ligases (100%) GO:0015977 (24.4%) GO:0009317 (24.4%) "GO:0003989 (24.4%) GO:0004658 (24.4%) GO:0016740 (2.6%)" carbon fixation (24.4%) acetyl-CoA carboxylase complex (24.4%) "acetyl-CoA carboxylase activity (24.4%) propionyl-CoA carboxylase activity (24.4%) transferase activity (2.6%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" INLDGGGFKGQSEAAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022627 (25%) "GO:0003723 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "RNA binding (25%) structural constituent of ribosome (25%)" "IPR000754 (20%) IPR014721 (20%) IPR020568 (20%)" "Small ribosomal subunit protein uS9 (20%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (20%) Ribosomal protein uS5 domain 2-type superfamily (20%)" AYGAPTITKDGVSVAR Pasteurellaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.8%) GO:0005737 (16.8%) "GO:0005524 (16.8%) GO:0016853 (16.8%) GO:0140662 (16.8%)" protein refolding (16.8%) cytoplasm (16.8%) "ATP binding (16.8%) isomerase activity (16.8%) ATP-dependent protein folding chaperone (16.8%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR027409 (16.8%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like apical domain superfamily (16.8%)" GLKLEQATIEMLGTADKVTVSKDNTTIVNGAGAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.9%) GO:0005737 (16.3%) "GO:0005524 (16.9%) GO:0016853 (16.9%) GO:0140662 (16.9%)" protein refolding (16.9%) cytoplasm (16.3%) "ATP binding (16.9%) isomerase activity (16.9%) ATP-dependent protein folding chaperone (16.9%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR027409 (16.8%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like apical domain superfamily (16.8%)" SIRPYTVLDMDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.49 (100%) glucose-6-phosphate dehydrogenase (NADP(+)) (100%) "GO:0006006 (20%) GO:0009051 (20%)" GO:0005829 (20%) "GO:0004345 (20%) GO:0050661 (20%)" "glucose metabolic process (20%) pentose-phosphate shunt, oxidative branch (20%)" cytosol (20%) "glucose-6-phosphate dehydrogenase activity (20%) NADP binding (20%)" "IPR001282 (20%) IPR019796 (20%) IPR022674 (20%)" "Glucose-6-phosphate dehydrogenase (20%) Glucose-6-phosphate dehydrogenase, active site (20%) Glucose-6-phosphate dehydrogenase, NAD-binding (20%)" CADAVKEYGIK root "GO:0006412 (19.9%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0005840 (20.1%) GO:1990904 (19.8%) GO:0022627 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.9%) GO:0070181 (0%)" "translation (19.9%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (20.1%) ribonucleoprotein complex (19.8%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%) small ribosomal subunit rRNA binding (0%)" "IPR001971 (25.2%) IPR036967 (25.2%) IPR018102 (24.9%)" "Small ribosomal subunit protein uS11 (25.2%) Small ribosomal subunit protein uS11 superfamily (25.2%) Small ribosomal subunit protein uS11, conserved site (24.9%)" GMGNPLSTVHPNDIETFTILK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.5%) IPR008969 (12.5%) IPR012910 (12.5%)" "TonB-dependent receptor-like, beta-barrel (12.5%) Carboxypeptidase-like, regulatory domain superfamily (12.5%) TonB-dependent receptor, plug domain (12.5%)" SLYHIIKPEIDFPEGTDEHDPAVYLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR008323 (100%) Uncharacterised conserved protein UCP033563 (100%) TVTGEDVTQEELGGASVHTTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.-.-.- (100%) Ligases (100%) GO:0015977 (22.9%) GO:0009317 (22.9%) "GO:0003989 (22.9%) GO:0004658 (22.9%) GO:0016740 (8.3%)" carbon fixation (22.9%) acetyl-CoA carboxylase complex (22.9%) "acetyl-CoA carboxylase activity (22.9%) propionyl-CoA carboxylase activity (22.9%) transferase activity (8.3%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" LTQYSHGAGCGCK root 2.7.9.3 (100%) selenide, water dikinase (100%) "GO:0016260 (20%) GO:0070329 (0%)" "GO:0005737 (19.9%) GO:0005829 (0%)" "GO:0004756 (20%) GO:0005524 (20%) GO:0000287 (19.4%)" "selenocysteine biosynthetic process (20%) tRNA seleno-modification (0%)" "cytoplasm (19.9%) cytosol (0%)" "selenide, water dikinase activity (20%) ATP binding (20%) magnesium ion binding (19.4%)" "IPR036921 (16.9%) IPR004536 (16.8%) IPR016188 (16.8%)" "PurM-like, N-terminal domain superfamily (16.9%) Selenophosphate synthetase (16.8%) PurM-like, N-terminal domain (16.8%)" LVTVIIKPFKLEDVR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.1.1.- (100%) Methyltransferases (100%) "GO:0006808 (24.9%) GO:0032259 (0.1%) GO:0045848 (0.1%)" "GO:0005829 (24.8%) GO:0005886 (0.3%)" "GO:0030234 (24.9%) GO:0005524 (24.8%) GO:0008168 (0.1%)" "regulation of nitrogen utilization (24.9%) methylation (0.1%) positive regulation of nitrogen utilization (0.1%)" "cytosol (24.8%) plasma membrane (0.3%)" "enzyme regulator activity (24.9%) ATP binding (24.8%) methyltransferase activity (0.1%)" "IPR002187 (20.2%) IPR011322 (20.2%) IPR015867 (20.2%)" "Nitrogen regulatory protein PII (20.2%) Nitrogen regulatory PII-like, alpha/beta (20.2%) Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal (20.2%)" NTLAGIATPDAYTDYLMAVLGAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" ALEEGLDDFAGCAVVISHDR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 3.6.1.- (100%) In phosphorus-containing anhydrides (100%) "GO:0045900 (12.9%) GO:0006412 (12%)" GO:0005737 (12%) "GO:0000049 (12.9%) GO:0005524 (12.9%) GO:0016887 (12.9%)" "negative regulation of translational elongation (12.9%) translation (12%)" cytoplasm (12%) "tRNA binding (12.9%) ATP binding (12.9%) ATP hydrolysis activity (12.9%)" "IPR003439 (17.1%) IPR003593 (17.1%) IPR022374 (17.1%)" "ABC transporter-like, ATP-binding domain (17.1%) AAA+ ATPase domain (17.1%) Energy-dependent translational throttle protein EttA (17.1%)" NGAFSLVGGGDSVACVNK root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.2%) IPR015824 (33.2%) IPR036043 (33.2%)" "Phosphoglycerate kinase (33.2%) Phosphoglycerate kinase, N-terminal (33.2%) Phosphoglycerate kinase superfamily (33.2%)" KGAINDLMADFR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.6%) GO:0005737 (16.6%) "GO:0000049 (16.6%) GO:0004826 (16.6%) GO:0005524 (16.6%)" phenylalanyl-tRNA aminoacylation (16.6%) cytoplasm (16.6%) "tRNA binding (16.6%) phenylalanine-tRNA ligase activity (16.6%) ATP binding (16.6%)" "IPR002319 (14.4%) IPR004188 (14.4%) IPR006195 (14.4%)" "Phenylalanyl-tRNA synthetase (14.4%) Phenylalanine-tRNA ligase, class II, N-terminal (14.4%) Aminoacyl-tRNA synthetase, class II (14.4%)" GGMGPLTEEGCQK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.2.1.32 (100%) L(+)-tartrate dehydratase (100%) "GO:0009408 (0.6%) GO:1901276 (0.6%)" "GO:0016020 (1.2%) GO:1902494 (0.6%)" "GO:0008730 (51.6%) GO:0016836 (41%) GO:0016829 (1.9%)" "response to heat (0.6%) tartrate catabolic process (0.6%)" "membrane (1.2%) catalytic complex (0.6%)" "L(+)-tartrate dehydratase activity (51.6%) hydro-lyase activity (41%) lyase activity (1.9%)" "IPR004647 (49.4%) IPR036660 (49.4%) IPR001898 (0.6%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (49.4%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (49.4%) Solute carrier family 13 (0.6%)" ILKEFMDSHPK Bacillota Bacteria Bacillati Bacillota GO:0006412 (25%) GO:0015934 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR001790 (20%) IPR002363 (20%) IPR022973 (20%)" "Large ribosomal subunit protein uL10 (20%) Large ribosomal subunit protein uL10, conserved site, bacteria (20%) Large ribosomal subunit protein uL10, bacteria (20%)" KIPYFDFEVPTALPGVDPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.2%) GO:0005829 (18.2%) "GO:0004612 (18.2%) GO:0005524 (18.2%) GO:0046872 (18.2%)" gluconeogenesis (18.2%) cytosol (18.2%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.2%) ATP binding (18.2%) metal ion binding (18.2%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" TKEQVILNTWYGGEMK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.3%) GO:0005829 (17.3%) "GO:0004612 (17.3%) GO:0005524 (17.3%) GO:0046872 (17.1%)" gluconeogenesis (17.3%) cytosol (17.3%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.3%) ATP binding (17.3%) metal ion binding (17.1%)" "IPR001272 (25.2%) IPR008210 (25.2%) IPR013035 (24.8%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.2%) Phosphoenolpyruvate carboxykinase, N-terminal (25.2%) Phosphoenolpyruvate carboxykinase, C-terminal (24.8%)" KALDNVTPQVEVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (20.5%) GO:0000028 (0.3%)" "GO:0015935 (20.3%) GO:0005840 (0.5%) GO:0022627 (0.3%)" "GO:0003735 (20.5%) GO:0019843 (20.5%) GO:0000049 (16.9%)" "translation (20.5%) ribosomal small subunit assembly (0.3%)" "small ribosomal subunit (20.3%) ribosome (0.5%) cytosolic small ribosomal subunit (0.3%)" "structural constituent of ribosome (20.5%) rRNA binding (20.5%) tRNA binding (16.9%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" TAEFLWQEGHTAHATREEAEEEAIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.2%) IPR004499 (11.2%) IPR006195 (11.2%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.2%) Proline-tRNA ligase, class IIa, archaeal-type (11.2%) Aminoacyl-tRNA synthetase, class II (11.2%)" FLVSGMGDALSTYFEAR root 1.1.1.6 (100%) glycerol dehydrogenase (100%) "GO:0006091 (7.1%) GO:0019563 (7.1%)" GO:0005829 (28.4%) "GO:0046872 (28.4%) GO:0016614 (17.3%) GO:0008888 (11.1%)" "generation of precursor metabolites and energy (7.1%) glycerol catabolic process (7.1%)" cytosol (28.4%) "metal ion binding (28.4%) oxidoreductase activity, acting on CH-OH group of donors (17.3%) glycerol dehydrogenase (NAD+) activity (11.1%)" "IPR016205 (33.6%) IPR001670 (33.4%) IPR018211 (33%)" "Glycerol dehydrogenase (33.6%) Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (33.4%) Alcohol dehydrogenase, iron-type, conserved site (33%)" LMDHWAESILSTLVEIAPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (25%) IPR018211 (25%) IPR044731 (25%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (25%) Alcohol dehydrogenase, iron-type, conserved site (25%) Butanol dehydrogenase-like (25%)" EAVENDVHVVGVSSLAAGHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (19.9%) GO:0005737 (19.9%) "GO:0004494 (19.9%) GO:0031419 (19.9%) GO:0046872 (19.9%)" propionate metabolic process, methylmalonyl pathway (19.9%) cytoplasm (19.9%) "methylmalonyl-CoA mutase activity (19.9%) cobalamin binding (19.9%) metal ion binding (19.9%)" "IPR006158 (16.8%) IPR006159 (16.8%) IPR036724 (16.8%)" "Cobalamin (vitamin B12)-binding domain (16.8%) Methylmalonyl-CoA mutase, C-terminal (16.8%) Cobalamin-binding domain superfamily (16.8%)" IVGDGIAIKPTGNK root "2.7.1.199 (90.6%) 2.7.1.191 (3.8%) 2.7.1.- (1.9%)" "protein-N(pi)-phosphohistidine--D-glucose phosphotransferase (90.6%) protein-N(pi)-phosphohistidine--D-mannose phosphotransferase (3.8%) Phosphotransferases with an alcohol group as acceptor (1.9%)" "GO:0009401 (32.6%) GO:0034763 (0%) GO:0043610 (0%)" "GO:0005737 (32.5%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0016301 (32.6%) GO:0046872 (1.5%) GO:0016740 (0.2%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (32.6%) negative regulation of transmembrane transport (0%) regulation of carbohydrate utilization (0%)" "cytoplasm (32.5%) cytosol (0%) membrane (0%)" "kinase activity (32.6%) metal ion binding (1.5%) transferase activity (0.2%)" "IPR001127 (33%) IPR011055 (33%) IPR050890 (33%)" "Phosphotransferase system, sugar-specific permease EIIA type 1 (33%) Duplicated hybrid motif (33%) Phosphotransferase system EIIA component (33%)" AAVAALTPVTENKFTTVVLSR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (20%) "GO:0005840 (21.3%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (18.7%)" translation (20%) "ribosome (21.3%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (18.7%)" "IPR002136 (34%) IPR023574 (34%) IPR013005 (31.9%)" "Large ribosomal subunit protein uL4 (34%) Large ribosomal subunit protein uL4 domain superfamily (34%) Large ribosomal subunit protein uL4-like (31.9%)" VGDVIYLTGTLVTCR Bacteria Bacteria 4.2.1.32 (100%) L(+)-tartrate dehydratase (100%) "GO:0009408 (0.5%) GO:1901276 (0.5%)" "GO:0016020 (0.5%) GO:1902494 (0.5%)" "GO:0008730 (54.1%) GO:0016836 (39.3%) GO:0016829 (3.1%)" "response to heat (0.5%) tartrate catabolic process (0.5%)" "membrane (0.5%) catalytic complex (0.5%)" "L(+)-tartrate dehydratase activity (54.1%) hydro-lyase activity (39.3%) lyase activity (3.1%)" "IPR036660 (49.9%) IPR004647 (49.6%) IPR001898 (0.3%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (49.9%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (49.6%) Solute carrier family 13 (0.3%)" KVTEPYLVDALSFTEAEAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR027848 (100%) Protein of unknown function DUF4494 (100%) SGDIDAGAVTFIMDKEGLTTTGISNLLNKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" AGTIPADQLAELCFSGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.2.7 (100%) butyrate kinase (100%) GO:0006083 (20%) GO:0005737 (20%) "GO:0005524 (20%) GO:0008776 (20%) GO:0047761 (20%)" acetate metabolic process (20%) cytoplasm (20%) "ATP binding (20%) acetate kinase activity (20%) butyrate kinase activity (20%)" "IPR000890 (25%) IPR011245 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Butyrate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" ITNAGVQESHPHDVAITQEAPNYSRGE Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" TFTAKPETVKR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (19.9%) GO:0017148 (19.9%) GO:0002181 (0%)" "GO:0022625 (19.9%) GO:0005840 (0.4%) GO:0005737 (0%)" "GO:0003735 (19.9%) GO:0003729 (19.9%) GO:0008270 (0%)" "translation (19.9%) negative regulation of translation (19.9%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (19.9%) ribosome (0.4%) cytoplasm (0%)" "structural constituent of ribosome (19.9%) mRNA binding (19.9%) zinc ion binding (0%)" "IPR005822 (25%) IPR005823 (25%) IPR036899 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13 superfamily (25%)" LYIPGVNQEKADALMAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis NKVQNGIILILGNNEAPANYPDNTYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0030145 (25%) GO:0070006 (25%)" proteolysis (25%) cytosol (25%) "manganese ion binding (25%) metalloaminopeptidase activity (25%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" TDFNFPGQK Pseudomonadati Bacteria Pseudomonadati 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (24.9%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (24.9%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR028923 (49.9%) IPR018236 (49.6%) IPR001636 (0.6%)" "SAICAR synthetase/ADE2, N-terminal (49.9%) SAICAR synthetase, conserved site (49.6%) Phosphoribosylaminoimidazole-succinocarboxamide synthase (0.6%)" IISAKDHGDSFR root "GO:0006865 (33.3%) GO:0015813 (0%) GO:0070778 (0%)" "GO:0005576 (33.2%) GO:0030288 (33.2%) GO:0042597 (0.1%)" "GO:0016595 (0%) GO:0070335 (0%)" "amino acid transport (33.3%) L-glutamate transmembrane transport (0%) L-aspartate transmembrane transport (0%)" "extracellular region (33.2%) outer membrane-bounded periplasmic space (33.2%) periplasmic space (0.1%)" "glutamate binding (0%) aspartate binding (0%)" "IPR051455 (50.2%) IPR001638 (49.8%)" "Bacterial solute-binding protein 3 (50.2%) Solute-binding protein family 3/N-terminal domain of MltF (49.8%)" STLVDTAGRVDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR002150 (25%) IPR027493 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL31 type A/B (25%) Large ribosomal subunit protein bL31 type B (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" AAVKGNVINLSLGFSHPVDHQLPAGITAECPTQTEIVLK root "GO:0002181 (23.8%) GO:0000027 (0.3%) GO:0006412 (0.3%)" "GO:0022625 (24.1%) GO:0005840 (2.3%) GO:0005737 (0.3%)" "GO:0003735 (24.1%) GO:0019843 (23.5%) GO:0008097 (0.3%)" "cytoplasmic translation (23.8%) ribosomal large subunit assembly (0.3%) translation (0.3%)" "cytosolic large ribosomal subunit (24.1%) ribosome (2.3%) cytoplasm (0.3%)" "structural constituent of ribosome (24.1%) rRNA binding (23.5%) 5S rRNA binding (0.3%)" "IPR019906 (19.5%) IPR020040 (19.5%) IPR036789 (19.5%)" "Large ribosomal subunit protein uL6, bacteria (19.5%) Large ribosomal subunit protein uL6, alpha-beta domain (19.5%) Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily (19.5%)" IKGNVHYVGVNDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.-.-.- (100%) Oxidoreductases (100%) "GO:0009055 (25.1%) GO:0010181 (25.1%) GO:0016491 (24.7%)" "electron transfer activity (25.1%) FMN binding (25.1%) oxidoreductase activity (24.7%)" "IPR001279 (14.2%) IPR036866 (14.2%) IPR045761 (14.2%)" "Metallo-beta-lactamase (14.2%) Ribonuclease Z/Hydroxyacylglutathione hydrolase-like (14.2%) ODP domain (14.2%)" QLKQDPWETIEEKYPVGSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (24.8%) IPR012340 (24.8%) IPR035104 (24.8%)" "S1 domain (24.8%) Nucleic acid-binding, OB-fold (24.8%) Ribosomal protein S1-like (24.8%)" VTAEDVLKPGTADILVPR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (14.5%) GO:0006352 (0%) GO:0006412 (0%)" "GO:0000428 (14.8%) GO:0005829 (13.1%) GO:0000345 (0%)" "GO:0003899 (14.6%) GO:0003677 (14.5%) GO:0000287 (13.5%)" "DNA-templated transcription (14.5%) DNA-templated transcription initiation (0%) translation (0%)" "DNA-directed RNA polymerase complex (14.8%) cytosol (13.1%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA-directed RNA polymerase activity (14.6%) DNA binding (14.5%) magnesium ion binding (13.5%)" "IPR007081 (9.4%) IPR045867 (9.4%) IPR007083 (9.2%)" "RNA polymerase Rpb1, domain 5 (9.4%) DNA-directed RNA polymerase, subunit beta-prime (9.4%) RNA polymerase Rpb1, domain 4 (9.2%)" VVSDLKQYGTVQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.4.21.107 (57.1%) 3.4.21.- (42.9%)" "peptidase Do (57.1%) Serine endopeptidases (42.9%)" GO:0006508 (47.1%) GO:0042597 (1.4%) "GO:0004252 (45.7%) GO:0016740 (4.3%) GO:0008233 (1.4%)" proteolysis (47.1%) periplasmic space (1.4%) "serine-type endopeptidase activity (45.7%) transferase activity (4.3%) peptidase activity (1.4%)" "IPR001478 (21.9%) IPR036034 (21.9%) IPR001940 (21.2%)" "PDZ domain (21.9%) PDZ superfamily (21.9%) Peptidase S1C (21.2%)" VMSLLEPTKK root "6.1.1.2 (99.6%) 3.1.3.18 (0.2%) 2.1.1.72 (0.1%)" "tryptophan--tRNA ligase (99.6%) phosphoglycolate phosphatase (0.2%) site-specific DNA-methyltransferase (adenine-specific) (0.1%)" "GO:0006436 (24.7%) GO:0005975 (0.1%) GO:0046295 (0.1%)" "GO:0005829 (24.7%) GO:0005739 (0.1%)" "GO:0004830 (24.7%) GO:0005524 (24.7%) GO:0016874 (0.4%)" "tryptophanyl-tRNA aminoacylation (24.7%) carbohydrate metabolic process (0.1%) glycolate biosynthetic process (0.1%)" "cytosol (24.7%) mitochondrion (0.1%)" "tryptophan-tRNA ligase activity (24.7%) ATP binding (24.7%) ligase activity (0.4%)" "IPR002305 (17%) IPR050203 (17%) IPR014729 (17%)" "Aminoacyl-tRNA synthetase, class Ic (17%) Tryptophan--tRNA ligase (17%) Rossmann-like alpha/beta/alpha sandwich fold (17%)" LPPYQGGGEMIQSVSFEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.8.1.7 (100%) cysteine desulfurase (100%) GO:0006534 (32.1%) "GO:0030170 (32.1%) GO:0031071 (32.1%) GO:0008483 (2.5%)" cysteine metabolic process (32.1%) "pyridoxal phosphate binding (32.1%) cysteine desulfurase activity (32.1%) transaminase activity (2.5%)" "IPR000192 (16.6%) IPR010970 (16.6%) IPR015421 (16.6%)" "Aminotransferase class V domain (16.6%) Cysteine desulfurase, SufS (16.6%) Pyridoxal phosphate-dependent transferase, major domain (16.6%)" ESVQALIDCMQEFEKLH Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (19.4%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%) GO:0008483 (0.6%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (19.4%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%) transaminase activity (0.6%)" "IPR000192 (20%) IPR015421 (20%) IPR015422 (20%)" "Aminotransferase class V domain (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" TLDRDNILSGYAEMIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.2.3.4 (100%) 3-dehydroquinate synthase (100%) "GO:0008652 (14.3%) GO:0009073 (14.3%) GO:0009423 (14.3%)" GO:0005737 (14.3%) "GO:0000166 (14.3%) GO:0003856 (14.3%) GO:0046872 (14.3%)" "amino acid biosynthetic process (14.3%) aromatic amino acid family biosynthetic process (14.3%) chorismate biosynthetic process (14.3%)" cytoplasm (14.3%) "nucleotide binding (14.3%) 3-dehydroquinate synthase activity (14.3%) metal ion binding (14.3%)" "IPR016037 (20%) IPR030960 (20%) IPR030963 (20%)" "3-dehydroquinate synthase AroB (20%) 3-dehydroquinate synthase, N-terminal domain (20%) 3-dehydroquinate synthase family (20%)" AGGPDPENNPHLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (33%) GO:0005829 (33%) "GO:0003677 (33%) GO:0016779 (0.9%)" regulation of DNA-templated transcription (33%) cytosol (33%) "DNA binding (33%) nucleotidyltransferase activity (0.9%)" "IPR002876 (16.7%) IPR017856 (16.7%) IPR026564 (16.7%)" "Transcriptional regulator TACO1-like (16.7%) Integrase-like, N-terminal (16.7%) Transcriptional regulator TACO1-like, domain 3 (16.7%)" GTEYEAFGGNKPFHTTILPFTR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.2.1.22 (100%) alpha-galactosidase (100%) "GO:0030246 (64.8%) GO:0016787 (33.3%) GO:0004557 (1.9%)" "carbohydrate binding (64.8%) hydrolase activity (33.3%) alpha-galactosidase activity (1.9%)" "IPR013785 (14%) IPR014718 (14%) IPR017853 (14%)" "Aldolase-type TIM barrel (14%) Glycoside hydrolase-type carbohydrate-binding (14%) Glycoside hydrolase superfamily (14%)" AVLELAGIKDVR Clostridia Bacteria Bacillati Bacillota Clostridia "GO:0006412 (17.1%) GO:0042254 (16.3%)" "GO:0015935 (15.9%) GO:0005737 (15.3%) GO:0022627 (1.2%)" "GO:0003735 (17.1%) GO:0019843 (17.1%)" "translation (17.1%) ribosome biogenesis (16.3%)" "small ribosomal subunit (15.9%) cytoplasm (15.3%) cytosolic small ribosomal subunit (1.2%)" "structural constituent of ribosome (17.1%) rRNA binding (17.1%)" "IPR000851 (14.3%) IPR005324 (14.3%) IPR005712 (14.3%)" "Small ribosomal subunit protein uS5 (14.3%) Small ribosomal subunit protein uS5, C-terminal (14.3%) Small ribosomal subunit protein uS5, bacteria (14.3%)" EQQVVQQMQHQLIGEIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0003755 (100%) peptidyl-prolyl cis-trans isomerase activity (100%) "IPR000297 (20%) IPR023058 (20%) IPR027304 (20%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (20%) Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site (20%) Trigger factor/SurA domain superfamily (20%)" VGVDITMPSADIVSYLHK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (24.2%) "GO:0005829 (24.2%) GO:0016020 (3.2%)" "GO:0030145 (24.2%) GO:0070006 (24.2%)" proteolysis (24.2%) "cytosol (24.2%) membrane (3.2%)" "manganese ion binding (24.2%) metalloaminopeptidase activity (24.2%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" AIVMNLEEDNVGAVLLGPTDKIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "7.1.2.2 (98.7%) 3.6.3.14 (1.3%)" "H(+)-transporting two-sector ATPase (98.7%) Transferred entry: 7.1.2.2 (1.3%)" "GO:0045259 (18.2%) GO:0005886 (17.5%)" "GO:0005524 (18.2%) GO:0043531 (18.2%) GO:0046933 (18.2%)" "proton-transporting ATP synthase complex (18.2%) plasma membrane (17.5%)" "ATP binding (18.2%) ADP binding (18.2%) proton-transporting ATP synthase activity, rotational mechanism (18.2%)" "IPR000194 (10.1%) IPR004100 (10.1%) IPR005294 (10.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.1%) ATP synthase, F1 complex, alpha subunit (10.1%)" HMDEAYQFMEDNGYNAVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.22 (100%) alpha-galactosidase (100%) "GO:0030246 (70.4%) GO:0016787 (25.9%) GO:0004557 (3.7%)" "carbohydrate binding (70.4%) hydrolase activity (25.9%) alpha-galactosidase activity (3.7%)" "IPR013785 (13.7%) IPR014718 (13.7%) IPR017853 (13.7%)" "Aldolase-type TIM barrel (13.7%) Glycoside hydrolase-type carbohydrate-binding (13.7%) Glycoside hydrolase superfamily (13.7%)" VNEIAYDVDDNPKAYYIQQAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006520 (16.8%) GO:0044205 (16.8%) GO:0006207 (16%)" GO:0005829 (16.8%) "GO:0004070 (16.8%) GO:0016597 (16.8%)" "amino acid metabolic process (16.8%) 'de novo' UMP biosynthetic process (16.8%) 'de novo' pyrimidine nucleobase biosynthetic process (16%)" cytosol (16.8%) "aspartate carbamoyltransferase activity (16.8%) amino acid binding (16.8%)" "IPR006130 (20.4%) IPR006131 (20.4%) IPR036901 (20.4%)" "Aspartate/ornithine carbamoyltransferase (20.4%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20.4%) Aspartate/ornithine carbamoyltransferase superfamily (20.4%)" TIQVIPHITDEIKR root 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.8%) GO:0044210 (11.7%) GO:0006241 (0.2%)" "GO:0005829 (11.8%) GO:0097268 (11.2%) GO:0016020 (0%)" "GO:0003883 (11.8%) GO:0042802 (11.8%) GO:0005524 (11.8%)" "pyrimidine nucleobase biosynthetic process (11.8%) 'de novo' CTP biosynthetic process (11.7%) CTP biosynthetic process (0.2%)" "cytosol (11.8%) cytoophidium (11.2%) membrane (0%)" "CTP synthase activity (11.8%) identical protein binding (11.8%) ATP binding (11.8%)" "IPR004468 (16.8%) IPR017456 (16.8%) IPR027417 (16.7%)" "CTP synthase (16.8%) CTP synthase, N-terminal (16.8%) P-loop containing nucleoside triphosphate hydrolase (16.7%)" TVNMMELIR root "7.1.2.2 (96.6%) 3.6.3.14 (3.4%) 3.6.1.15 (0%)" "H(+)-transporting two-sector ATPase (96.6%) Transferred entry: 7.1.2.2 (3.4%) nucleoside-triphosphate phosphatase (0%)" "GO:0002098 (0%) GO:0000902 (0%) GO:0006048 (0%)" "GO:0045259 (24.5%) GO:0005886 (20.8%) GO:0005739 (0%)" "GO:0005524 (24.5%) GO:0046933 (24.5%) GO:0016787 (4.5%)" "tRNA wobble uridine modification (0%) cell morphogenesis (0%) UDP-N-acetylglucosamine biosynthetic process (0%)" "proton-transporting ATP synthase complex (24.5%) plasma membrane (20.8%) mitochondrion (0%)" "ATP binding (24.5%) proton-transporting ATP synthase activity, rotational mechanism (24.5%) hydrolase activity (4.5%)" "IPR000194 (11.4%) IPR050053 (11.4%) IPR027417 (11.4%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11.4%) ATPase alpha/beta chains (11.4%) P-loop containing nucleoside triphosphate hydrolase (11.4%)" MYGHLKGEVADAVSGMLTELQER root "6.1.1.2 (99.5%) 3.1.3.18 (0.5%)" "tryptophan--tRNA ligase (99.5%) phosphoglycolate phosphatase (0.5%)" "GO:0006436 (24.8%) GO:0005975 (0.1%) GO:0046295 (0.1%)" "GO:0005829 (24.8%) GO:0005739 (0.3%)" "GO:0004830 (25%) GO:0005524 (23.7%) GO:0016874 (0.7%)" "tryptophanyl-tRNA aminoacylation (24.8%) carbohydrate metabolic process (0.1%) glycolate biosynthetic process (0.1%)" "cytosol (24.8%) mitochondrion (0.3%)" "tryptophan-tRNA ligase activity (25%) ATP binding (23.7%) ligase activity (0.7%)" "IPR050203 (17.4%) IPR014729 (17.3%) IPR002305 (16.7%)" "Tryptophan--tRNA ligase (17.4%) Rossmann-like alpha/beta/alpha sandwich fold (17.3%) Aminoacyl-tRNA synthetase, class Ic (16.7%)" KGETVEFPVALVVDGSK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR001787 (25%) IPR018258 (25%) IPR028909 (25%)" "Large ribosomal subunit protein bL21 (25%) Large ribosomal subunit protein bL21, conserved site (25%) Large ribosomal subunit protein bL21-like (25%)" GRFDHFNINVTDLSR KVLNIFPSIDTGVCAASVR Bacteria Bacteria "1.11.1.24 (91.2%) 1.11.1.- (8.1%) 1.11.1.15 (0.4%)" "thioredoxin-dependent peroxiredoxin (91.2%) Peroxidases (8.1%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (0.4%)" GO:0034599 (48.6%) "GO:0005829 (0.1%) GO:0042597 (0.1%)" "GO:0008379 (50%) GO:0004601 (1.1%) GO:0004130 (0.1%)" cellular response to oxidative stress (48.6%) "cytosol (0.1%) periplasmic space (0.1%)" "thioredoxin peroxidase activity (50%) peroxidase activity (1.1%) cytochrome-c peroxidase activity (0.1%)" "IPR013740 (16.7%) IPR036249 (16.7%) IPR050455 (16.7%)" "Redoxin (16.7%) Thioredoxin-like superfamily (16.7%) Thiol Peroxidase Tpx Subfamily (16.7%)" GISEKQIEEQLACFVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" IHAEVPADESPEMTEGYEGFYHLASMK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 3.4.11.4 (100%) tripeptide aminopeptidase (100%) "GO:0006508 (16.5%) GO:0043171 (13.1%) GO:0006518 (3.3%)" GO:0005829 (17%) "GO:0045148 (17%) GO:0008237 (16.5%) GO:0008270 (16.1%)" "proteolysis (16.5%) peptide catabolic process (13.1%) peptide metabolic process (3.3%)" cytosol (17%) "tripeptide aminopeptidase activity (17%) metallopeptidase activity (16.5%) zinc ion binding (16.1%)" "IPR036264 (20.6%) IPR011650 (20.5%) IPR002933 (20.2%)" "Bacterial exopeptidase dimerisation domain (20.6%) Peptidase M20, dimerisation domain (20.5%) Peptidase M20 (20.2%)" AQFAQYGMLSVPEDVLDNYAKDMLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" LLQPSSNVQISK root "2.3.1.54 (51.2%) 4.2.1.172 (24.4%) 4.1.1.83 (19.5%)" "formate C-acetyltransferase (51.2%) trans-4-hydroxy-L-proline dehydratase (24.4%) 4-hydroxyphenylacetate decarboxylase (19.5%)" "GO:0019471 (27.5%) GO:0006420 (0.9%) GO:0019492 (0.3%)" GO:0005829 (28.1%) "GO:0016835 (27.5%) GO:0016740 (6.6%) GO:0008861 (4.2%)" "obsolete 4-hydroxyproline metabolic process (27.5%) arginyl-tRNA aminoacylation (0.9%) proline salvage (0.3%)" cytosol (28.1%) "carbon-oxygen lyase activity (27.5%) transferase activity (6.6%) formate C-acetyltransferase activity (4.2%)" "IPR004184 (23.7%) IPR051215 (23.7%) IPR001150 (23.5%)" "Pyruvate formate lyase domain (23.7%) Glycyl Radical Enzyme (23.7%) Glycine radical domain (23.5%)" ELDTYCEIVPYNKFPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0006177 (0.5%) GO:0005829 (33.2%) "GO:0003921 (33.2%) GO:0005524 (33.2%)" GMP biosynthetic process (0.5%) cytosol (33.2%) "GMP synthase activity (33.2%) ATP binding (33.2%)" "IPR001674 (12.5%) IPR004739 (12.5%) IPR014729 (12.5%)" "GMP synthase, C-terminal (12.5%) GMP synthase, glutamine amidotransferase (12.5%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" GYAIADDSDYFHFTSNNTIYGTEMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" MGGQMGGDRVTTHNLQVLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" NIDELRADIIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.14 (100%) L-rhamnose isomerase (100%) "GO:0019301 (20%) GO:0019324 (20%)" GO:0005737 (20%) "GO:0008740 (20%) GO:0030145 (20%)" "rhamnose catabolic process (20%) L-lyxose metabolic process (20%)" cytoplasm (20%) "L-rhamnose isomerase activity (20%) manganese ion binding (20%)" "IPR009308 (33.3%) IPR036237 (33.3%) IPR050337 (33.3%)" "Rhamnose isomerase (33.3%) Xylose isomerase-like superfamily (33.3%) L-rhamnose isomerase (33.3%)" RQDAIGTPYCVTVDHQTLEDNCVTLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.5%) GO:0015966 (12.4%) GO:0044281 (0.1%)" "GO:0005737 (12.5%) GO:0070062 (12.4%) GO:1990742 (12.4%)" "GO:0004820 (12.5%) GO:0005524 (12.5%) GO:0004081 (12.4%)" "glycyl-tRNA aminoacylation (12.5%) diadenosine tetraphosphate biosynthetic process (12.4%) small molecule metabolic process (0.1%)" "cytoplasm (12.5%) extracellular exosome (12.4%) microvesicle (12.4%)" "glycine-tRNA ligase activity (12.5%) ATP binding (12.5%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.4%)" "IPR004154 (11.3%) IPR027031 (11.3%) IPR036621 (11.3%)" "Anticodon-binding (11.3%) Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 (11.3%) Anticodon-binding domain superfamily (11.3%)" LIADMLSTAGINR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (19.6%) IPR000842 (19.6%) IPR005946 (19.6%)" "Phosphoribosyltransferase domain (19.6%) Phosphoribosyl pyrophosphate synthetase, conserved site (19.6%) Ribose-phosphate pyrophosphokinase (19.6%)" VIPLPDEQATLDLGER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.3.1.234 (100%) N(6)-L-threonylcarbamoyladenine synthase (100%) "GO:0002949 (21.9%) GO:1990145 (0.2%)" "GO:0005737 (21.4%) GO:0000408 (0.2%)" "GO:0005524 (21.4%) GO:0046872 (21.4%) GO:0016787 (5.6%)" "tRNA threonylcarbamoyladenosine modification (21.9%) maintenance of translational fidelity (0.2%)" "cytoplasm (21.4%) EKC/KEOPS complex (0.2%)" "ATP binding (21.4%) metal ion binding (21.4%) hydrolase activity (5.6%)" "IPR003442 (50%) IPR027417 (50%)" "tRNA threonylcarbamoyl adenosine modification protein TsaE (50%) P-loop containing nucleoside triphosphate hydrolase (50%)" DRPAVPGNPIFEMPEALSGASVHEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.9 (100%) Xaa-Pro dipeptidase (100%) GO:0005737 (31.5%) "GO:0046872 (31.5%) GO:0070006 (31.5%) GO:0102009 (3.7%)" cytoplasm (31.5%) "metal ion binding (31.5%) metalloaminopeptidase activity (31.5%) proline dipeptidase activity (3.7%)" "IPR000587 (14.3%) IPR000994 (14.3%) IPR029149 (14.3%)" "Creatinase, N-terminal (14.3%) Peptidase M24 (14.3%) Creatinase/Aminopeptidase P/Spt16, N-terminal (14.3%)" AYTSYLKR root "5.4.2.11 (99.8%) 5.4.2.1 (0.2%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (99.8%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.2%)" "GO:0006096 (34.4%) GO:0006094 (30%) GO:0006888 (0.1%)" "GO:0016020 (0.2%) GO:0005829 (0.1%) GO:0070939 (0.1%)" "GO:0004619 (34.4%) GO:0003824 (0.1%) GO:0008720 (0.1%)" "glycolytic process (34.4%) gluconeogenesis (30%) endoplasmic reticulum to Golgi vesicle-mediated transport (0.1%)" "membrane (0.2%) cytosol (0.1%) Dsl1/NZR complex (0.1%)" "phosphoglycerate mutase activity (34.4%) catalytic activity (0.1%) D-lactate dehydrogenase (NAD+) activity (0.1%)" "IPR005952 (25%) IPR013078 (25%) IPR029033 (24.8%)" "Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%) Histidine phosphatase superfamily (24.8%)" DKEISEDDDRRSQDDVQK root "GO:0002184 (33.1%) GO:0006412 (0.2%)" "GO:0005829 (33.1%) GO:0005737 (0.2%)" "GO:0043023 (33.1%) GO:0003746 (0.2%)" "cytoplasmic translational termination (33.1%) translation (0.2%)" "cytosol (33.1%) cytoplasm (0.2%)" "ribosomal large subunit binding (33.1%) translation elongation factor activity (0.2%)" "IPR023584 (33.4%) IPR036191 (33.4%) IPR002661 (33.2%)" "Ribosome recycling factor domain (33.4%) RRF superfamily (33.4%) Ribosome recycling factor (33.2%)" NVMIGIDDDKIVYVPFAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0016208 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) AMP binding (9.1%)" "IPR000023 (16.7%) IPR012003 (16.7%) IPR012828 (16.7%)" "Phosphofructokinase domain (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic (16.7%)" STEGTYNLGNSLYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016020 (66.7%) GO:0016740 (33.3%) membrane (66.7%) transferase activity (33.3%) "IPR011990 (29%) IPR019734 (29%) IPR051685 (22.6%)" "Tetratricopeptide-like helical domain superfamily (29%) Tetratricopeptide repeat (29%) Ycf3/AcsC/BcsC/TPR Multifunctional (22.6%)" AGPVLMEPIMK root "GO:0032790 (19.8%) GO:0070125 (0.1%)" "GO:0005737 (19%) GO:0005739 (0.2%)" "GO:0003746 (20.5%) GO:0005525 (20.4%) GO:0003924 (19.9%)" "ribosome disassembly (19.8%) mitochondrial translational elongation (0.1%)" "cytoplasm (19%) mitochondrion (0.2%)" "translation elongation factor activity (20.5%) GTP binding (20.4%) GTPase activity (19.9%)" "IPR000640 (6.4%) IPR005517 (6.4%) IPR009022 (6.3%)" "Elongation factor EFG, domain V-like (6.4%) Translation elongation factor EFG/EF2, domain IV (6.4%) Elongation factor G, domain III (6.3%)" YFYPLISTFSTYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.6.1.- (50%) 2.6.1.33 (50%)" "Transaminases (50%) dTDP-4-amino-4,6-dideoxy-D-glucose transaminase (50%)" GO:0000271 (33.3%) "GO:0030170 (33.3%) GO:0008483 (30.6%) GO:0019179 (2.8%)" polysaccharide biosynthetic process (33.3%) "pyridoxal phosphate binding (33.3%) transaminase activity (30.6%) dTDP-4-amino-4,6-dideoxy-D-glucose transaminase activity (2.8%)" "IPR000653 (26.1%) IPR015421 (26.1%) IPR015424 (26.1%)" "DegT/DnrJ/EryC1/StrS aminotransferase (26.1%) Pyridoxal phosphate-dependent transferase, major domain (26.1%) Pyridoxal phosphate-dependent transferase (26.1%)" LDRGEDLPQYIKDHPIYYAGPAK Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) GO:0005829 (0.1%) "GO:0004333 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (0.1%) "fumarate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR004647 (16.7%) IPR036660 (16.7%) IPR051208 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (16.7%) Class-I Fumarase/Tartrate Dehydratase (16.7%)" FSTDLPEFVEAEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (14.4%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (14.4%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" MHENQQPQTEAFELSAAER Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "1.6.5.11 (36.7%) 1.6.5.9 (23.3%) 7.1.1.- (16.7%)" "Transferred entry: 1.6.5.9 (36.7%) NADH:ubiquinone reductase (non-electrogenic) (23.3%) Hydron translocation or charge separation linked to oxidoreductase reactions (16.7%)" "GO:0022904 (0.1%) GO:1902600 (0.1%)" "GO:0005886 (0.1%) GO:0016020 (0.1%) GO:0030964 (0.1%)" "GO:0046872 (24.9%) GO:0051537 (24.9%) GO:0003954 (24.8%)" "respiratory electron transport chain (0.1%) proton transmembrane transport (0.1%)" "plasma membrane (0.1%) membrane (0.1%) NADH dehydrogenase complex (0.1%)" "metal ion binding (24.9%) 2 iron, 2 sulfur cluster binding (24.9%) NADH dehydrogenase activity (24.8%)" "IPR036249 (25.1%) IPR041921 (25.1%) IPR002023 (24.9%)" "Thioredoxin-like superfamily (25.1%) NADH-quinone oxidoreductase subunit E, N-terminal (25.1%) NADH-quinone oxidoreductase subunit E-like (24.9%)" YLILNIFPSMDTGVCATSVRK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" TMTDPIADMLTR Bacteria Bacteria "GO:0006412 (16.7%) GO:0002181 (0%)" "GO:0005840 (16.8%) GO:1990904 (16.7%) GO:0005737 (16.3%)" "GO:0003735 (16.8%) GO:0019843 (16.7%)" "translation (16.7%) cytoplasmic translation (0%)" "ribosome (16.8%) ribonucleoprotein complex (16.7%) cytoplasm (16.3%)" "structural constituent of ribosome (16.8%) rRNA binding (16.7%)" "IPR000630 (41%) IPR035987 (41%) IPR047863 (17.9%)" "Small ribosomal subunit protein uS8 (41%) Small ribosomal subunit protein uS8 superfamily (41%) Small ribosomal subunit protein uS8, conserved site (17.9%)" KYHAHDEKNECNVGDTVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022627 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000266 (25%) IPR012340 (25%) IPR019979 (25%)" "Small ribosomal subunit protein uS17 (25%) Nucleic acid-binding, OB-fold (25%) Small ribosomal subunit protein uS17, conserved site (25%)" NMFALLNKPGYEK Bacteria Bacteria 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20.1%) IPR018189 (20.1%) IPR035482 (20.1%)" "Phosphoglucose isomerase (PGI) (20.1%) Phosphoglucose isomerase, conserved site (20.1%) Phosphoglucose isomerase, SIS domain 2 (20.1%)" LVDGQGNFGSVDGDSPAAMR root "5.6.2.2 (99.5%) 5.99.1.3 (0.4%) 5.6.2.- (0.1%)" "DNA topoisomerase (ATP-hydrolyzing) (99.5%) Transferred entry: 5.6.2.2 (0.4%) Enzymes altering nucleic acid conformation (0.1%)" "GO:0006265 (12.8%) GO:0006261 (11.5%) GO:0016539 (0%)" "GO:0005737 (12.8%) GO:0009330 (12.8%) GO:0005694 (11.7%)" "GO:0003677 (12.8%) GO:0005524 (12.8%) GO:0034335 (11.5%)" "DNA topological change (12.8%) DNA-templated DNA replication (11.5%) intein-mediated protein splicing (0%)" "cytoplasm (12.8%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.8%) chromosome (11.7%)" "DNA binding (12.8%) ATP binding (12.8%) DNA negative supercoiling activity (11.5%)" "IPR002205 (12.9%) IPR050220 (12.9%) IPR013758 (12.9%)" "DNA topoisomerase, type IIA, domain A (12.9%) Type II DNA Topoisomerases (12.9%) DNA topoisomerase, type IIA, domain A, alpha-beta (12.9%)" GVKSDLSELSLSDLKGKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" GITINTSHVEYQTANR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (15.7%) GO:0032045 (10.9%)" "GO:0003746 (15.8%) GO:0003924 (15.8%) GO:0005525 (15.8%)" "cytosol (15.7%) guanyl-nucleotide exchange factor complex (10.9%)" "translation elongation factor activity (15.8%) GTPase activity (15.8%) GTP binding (15.8%)" "IPR000795 (8.4%) IPR027417 (8.4%) IPR050055 (8.4%)" "Translational (tr)-type GTP-binding domain (8.4%) P-loop containing nucleoside triphosphate hydrolase (8.4%) Elongation factor Tu GTPase (8.4%)" VLNIFPSIDTGVCAASVRK Bacteria Bacteria "1.11.1.24 (91.1%) 1.11.1.- (8.2%) 1.11.1.15 (0.4%)" "thioredoxin-dependent peroxiredoxin (91.1%) Peroxidases (8.2%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (0.4%)" GO:0034599 (48%) "GO:0005829 (0.1%) GO:0042597 (0.1%)" "GO:0008379 (50.6%) GO:0004601 (1.1%) GO:0004130 (0.1%)" cellular response to oxidative stress (48%) "cytosol (0.1%) periplasmic space (0.1%)" "thioredoxin peroxidase activity (50.6%) peroxidase activity (1.1%) cytochrome-c peroxidase activity (0.1%)" "IPR013740 (16.8%) IPR036249 (16.8%) IPR050455 (16.8%)" "Redoxin (16.8%) Thioredoxin-like superfamily (16.8%) Thiol Peroxidase Tpx Subfamily (16.8%)" KVLADGGSLIIMSHMGKPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%)" GO:0005829 (16.5%) "GO:0004618 (16.5%) GO:0005524 (16.5%) GO:0043531 (16.5%)" "gluconeogenesis (16.5%) glycolytic process (16.5%)" cytosol (16.5%) "phosphoglycerate kinase activity (16.5%) ATP binding (16.5%) ADP binding (16.5%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" HLVESLLIGLLSDGHILLEGVPGLAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR011703 (25%) IPR027417 (25%) IPR041628 (25%)" "ATPase, AAA-3 (25%) P-loop containing nucleoside triphosphate hydrolase (25%) ChlI/MoxR, AAA lid domain (25%)" HGYTEVLPPFMANR Peptostreptococcales Bacteria Bacillati Bacillota Clostridia Peptostreptococcales 6.1.1.11 (100%) serine--tRNA ligase (100%) "GO:0006434 (14%) GO:0016260 (13.4%) GO:0006412 (0.6%)" GO:0005737 (14.6%) "GO:0004828 (14.6%) GO:0005524 (14%) GO:0016740 (14%)" "seryl-tRNA aminoacylation (14%) selenocysteine biosynthetic process (13.4%) translation (0.6%)" cytoplasm (14.6%) "serine-tRNA ligase activity (14.6%) ATP binding (14%) transferase activity (14%)" "IPR006195 (12.7%) IPR010978 (12.7%) IPR015866 (12.7%)" "Aminoacyl-tRNA synthetase, class II (12.7%) Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm (12.7%) Serine-tRNA synthetase, type1, N-terminal (12.7%)" QSHQEMLNHVEGLLQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (25%) GO:0005737 (25%) "GO:0004828 (25%) GO:0005524 (25%)" seryl-tRNA aminoacylation (25%) cytoplasm (25%) "serine-tRNA ligase activity (25%) ATP binding (25%)" "IPR002314 (13%) IPR002317 (13%) IPR006195 (13%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (13%) Serine-tRNA ligase, type1 (13%) Aminoacyl-tRNA synthetase, class II (13%)" KMNQIVEHEANPAILGMVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR005996 (25%) IPR016082 (25%) IPR018038 (25%)" "Large ribosomal subunit protein uL30, bacteria (25%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (25%) Large ribosomal subunit protein uL30, conserved site (25%)" AIEIGLKPIVVINK root "3.6.5.- (99.4%) 3.6.1.1 (0.6%)" "Acting on GTP; involved in cellular and subcellular movement (99.4%) inorganic diphosphatase (0.6%)" "GO:0000027 (9.6%) GO:0009409 (8.8%) GO:0010467 (8.4%)" "GO:0005829 (10.5%) GO:1990904 (10.5%)" "GO:0003924 (10.5%) GO:0005525 (10.5%) GO:0000049 (9.6%)" "ribosomal large subunit assembly (9.6%) response to cold (8.8%) gene expression (8.4%)" "cytosol (10.5%) ribonucleoprotein complex (10.5%)" "GTPase activity (10.5%) GTP binding (10.5%) tRNA binding (9.6%)" "IPR000795 (6.8%) IPR027417 (6.8%) IPR009000 (6.7%)" "Translational (tr)-type GTP-binding domain (6.8%) P-loop containing nucleoside triphosphate hydrolase (6.8%) Translation protein, beta-barrel domain superfamily (6.7%)" INIIDTPGHSDFGGEVER root "3.6.5.- (99.5%) 2.7.11.1 (0.3%) 3.6.5.3 (0.3%)" "Acting on GTP; involved in cellular and subcellular movement (99.5%) non-specific serine/threonine protein kinase (0.3%) protein-synthesizing GTPase (0.3%)" "GO:0009409 (10.1%) GO:0010467 (9.5%) GO:0000027 (5.6%)" "GO:0005829 (12.5%) GO:1990904 (12.5%) GO:0009507 (0.3%)" "GO:0003924 (13%) GO:0005525 (13%) GO:0000049 (5.6%)" "response to cold (10.1%) gene expression (9.5%) ribosomal large subunit assembly (5.6%)" "cytosol (12.5%) ribonucleoprotein complex (12.5%) chloroplast (0.3%)" "GTPase activity (13%) GTP binding (13%) tRNA binding (5.6%)" "IPR000795 (7.1%) IPR005225 (7.1%) IPR031157 (7%)" "Translational (tr)-type GTP-binding domain (7.1%) Small GTP-binding domain (7.1%) Tr-type G domain, conserved site (7%)" AECVIINAVECEPYLTADHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.-.-.- (100%) Translocases (100%) GO:0022900 (19.5%) "GO:0005886 (19.5%) GO:0016020 (0.6%)" "GO:0009055 (20.1%) GO:0046872 (20.1%) GO:0051539 (20.1%)" electron transport chain (19.5%) "plasma membrane (19.5%) membrane (0.6%)" "electron transfer activity (20.1%) metal ion binding (20.1%) 4 iron, 4 sulfur cluster binding (20.1%)" "IPR010208 (14.3%) IPR011538 (14.3%) IPR017896 (14.3%)" "Ion-translocating oxidoreductase complex, subunit RnfC/RsxC (14.3%) NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain (14.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14.3%)" VIVFSPHPDDDVISMGGTLR Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.5.99.6 (98.2%) 3.1.1.31 (1.8%)" "glucosamine-6-phosphate deaminase (98.2%) 6-phosphogluconolactonase (1.8%)" "GO:0005975 (32.3%) GO:0006044 (31.8%) GO:0006046 (0.8%)" "GO:0004342 (32.6%) GO:0016853 (1.4%) GO:0016787 (0.5%)" "carbohydrate metabolic process (32.3%) N-acetylglucosamine metabolic process (31.8%) N-acetylglucosamine catabolic process (0.8%)" "glucosamine-6-phosphate deaminase activity (32.6%) isomerase activity (1.4%) hydrolase activity (0.5%)" "IPR003737 (17.5%) IPR052960 (17.5%) IPR024078 (17.1%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (17.5%) Glucosamine-6-phosphate deaminase-like (17.5%) Putative deacetylase LmbE-like domain superfamily (17.1%)" QSLKDAGLSTSDIDEVILVGGSTR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005737 (23.6%) GO:0070013 (2.8%)" "GO:0005524 (24.5%) GO:0051082 (24.5%) GO:0140662 (24.5%)" "cytoplasm (23.6%) intracellular organelle lumen (2.8%)" "ATP binding (24.5%) unfolded protein binding (24.5%) ATP-dependent protein folding chaperone (24.5%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" SCIDSGFSSVMIDGSHLPYEENVALTK Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.5%) GO:0030388 (24.5%) GO:0005975 (0.5%)" GO:0016020 (0.3%) "GO:0008270 (25%) GO:0004332 (24.5%) GO:0016832 (0.5%)" "glycolytic process (24.5%) fructose 1,6-bisphosphate metabolic process (24.5%) carbohydrate metabolic process (0.5%)" membrane (0.3%) "zinc ion binding (25%) fructose-bisphosphate aldolase activity (24.5%) aldehyde-lyase activity (0.5%)" "IPR000771 (25.1%) IPR013785 (25.1%) IPR050246 (25.1%)" "Fructose-bisphosphate aldolase, class-II (25.1%) Aldolase-type TIM barrel (25.1%) Class II Fructose-bisphosphate Aldolase (25.1%)" LGTPMFYGGPSAGYFATR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.6%) "GO:0005829 (16.6%) GO:0005960 (16.6%)" "GO:0004375 (16.6%) GO:0016594 (16.6%) GO:0030170 (16.6%)" glycine decarboxylation via glycine cleavage system (16.6%) "cytosol (16.6%) glycine cleavage complex (16.6%)" "glycine dehydrogenase (decarboxylating) activity (16.6%) glycine binding (16.6%) pyridoxal phosphate binding (16.6%)" "IPR015421 (14.4%) IPR015422 (14.4%) IPR015424 (14.4%)" "Pyridoxal phosphate-dependent transferase, major domain (14.4%) Pyridoxal phosphate-dependent transferase, small domain (14.4%) Pyridoxal phosphate-dependent transferase (14.4%)" MHTDFLNFDAIEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0030145 (25%) GO:0070006 (25%)" proteolysis (25%) cytosol (25%) "manganese ion binding (25%) metalloaminopeptidase activity (25%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" MLANPDKTDLIEAFYKDLEFGTGGLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.- (50%) 5.4.2.2 (50%)" "Phosphotransferases (phosphomutases) (50%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (50%)" "GO:0005975 (24%) GO:0006166 (24%)" "GO:0000287 (24%) GO:0008973 (24%) GO:0004614 (4%)" "carbohydrate metabolic process (24%) purine ribonucleoside salvage (24%)" "magnesium ion binding (24%) phosphopentomutase activity (24%) phosphoglucomutase activity (4%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" QSQEEMGHAYAMADYIIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.4%) GO:0006879 (14.4%)" "GO:0005829 (14.4%) GO:0005737 (0.5%)" "GO:0004322 (14.4%) GO:0008198 (14.4%) GO:0008199 (14.4%)" "iron ion transport (14.4%) intracellular iron ion homeostasis (14.4%)" "cytosol (14.4%) cytoplasm (0.5%)" "ferroxidase activity (14.4%) ferrous iron binding (14.4%) ferric iron binding (14.4%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" VFIMDDAEQFMPNYLR root "GO:0006457 (0%) GO:0006974 (0%) GO:0009408 (0%)" "GO:0005737 (19.7%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0005524 (20%) GO:0016887 (20%) GO:0051082 (20%)" "protein folding (0%) DNA damage response (0%) response to heat (0%)" "cytoplasm (19.7%) cytosol (0%) plasma membrane (0%)" "ATP binding (20%) ATP hydrolysis activity (20%) unfolded protein binding (20%)" "IPR001404 (14.6%) IPR020568 (14.6%) IPR020575 (14.3%)" "Heat shock protein Hsp90 family (14.6%) Ribosomal protein uS5 domain 2-type superfamily (14.6%) Heat shock protein Hsp90, N-terminal (14.3%)" NVVLDKSFGAPTITK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.2%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (16.4%) GO:1990220 (0.1%) GO:0005829 (0%)" "GO:0005524 (17.2%) GO:0140662 (17.2%) GO:0016853 (16.7%)" "protein refolding (17.2%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (16.4%) GroEL-GroES complex (0.1%) cytosol (0%)" "ATP binding (17.2%) ATP-dependent protein folding chaperone (17.2%) isomerase activity (16.7%)" "IPR001844 (16.9%) IPR002423 (16.9%) IPR027413 (16.9%)" "Chaperonin Cpn60/GroEL (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%) GroEL-like equatorial domain superfamily (16.9%)" AITWMNSTVNGKPVVTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005980 (33.3%) "GO:0004134 (33.3%) GO:0004135 (33.3%)" glycogen catabolic process (33.3%) "4-alpha-glucanotransferase activity (33.3%) amylo-alpha-1,6-glucosidase activity (33.3%)" "IPR008928 (20%) IPR010401 (20%) IPR012341 (20%)" "Six-hairpin glycosidase superfamily (20%) Glycogen debranching enzyme (20%) Six-hairpin glycosidase-like superfamily (20%)" VDEIATDVDKTPHAWYFQQAGNGIFAR root 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0044205 (16.5%) GO:0006520 (16.4%) GO:0006207 (16.1%)" "GO:0005829 (16.5%) GO:0005737 (0.1%) GO:0009347 (0.1%)" "GO:0004070 (16.5%) GO:0016597 (16.5%) GO:0016740 (0.6%)" "'de novo' UMP biosynthetic process (16.5%) amino acid metabolic process (16.4%) 'de novo' pyrimidine nucleobase biosynthetic process (16.1%)" "cytosol (16.5%) cytoplasm (0.1%) aspartate carbamoyltransferase complex (0.1%)" "aspartate carbamoyltransferase activity (16.5%) amino acid binding (16.5%) transferase activity (0.6%)" "IPR006130 (20.2%) IPR006131 (20.2%) IPR036901 (20.2%)" "Aspartate/ornithine carbamoyltransferase (20.2%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20.2%) Aspartate/ornithine carbamoyltransferase superfamily (20.2%)" KRYPAVNPIESYSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (22.9%) GO:0046034 (1.4%)" "GO:0005524 (24.3%) GO:0046961 (24.3%) GO:0046933 (22.9%)" "proton motive force-driven plasma membrane ATP synthesis (22.9%) ATP metabolic process (1.4%)" "ATP binding (24.3%) proton-transporting ATPase activity, rotational mechanism (24.3%) proton-transporting ATP synthase activity, rotational mechanism (22.9%)" "IPR000194 (13.9%) IPR004100 (13.9%) IPR020003 (13.9%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (13.9%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (13.9%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (13.9%)" NNRFQVAQTMEEATK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.2.1.5 (95.5%) 6.2.1.- (4.5%)" "succinate--CoA ligase (ADP-forming) (95.5%) Acid--thiol ligases (4.5%)" "GO:0006099 (13.2%) GO:0006104 (13.2%)" "GO:0005829 (13.2%) GO:0042709 (13.2%)" "GO:0000287 (13.2%) GO:0004775 (13.2%) GO:0005524 (13.2%)" "tricarboxylic acid cycle (13.2%) succinyl-CoA metabolic process (13.2%)" "cytosol (13.2%) succinate-CoA ligase complex (13.2%)" "magnesium ion binding (13.2%) succinate-CoA ligase (ADP-forming) activity (13.2%) ATP binding (13.2%)" "IPR005809 (16.7%) IPR005811 (16.7%) IPR013650 (16.7%)" "Succinate--CoA ligase-like, beta subunit (16.7%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (16.7%) ATP-grasp fold, succinyl-CoA synthetase-type (16.7%)" ACNKLQGQYTSGPCSVSQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.6.1.- (89.4%) 2.6.1.1 (10.6%)" "Transaminases (89.4%) aspartate transaminase (10.6%)" GO:0006520 (33.2%) "GO:0030170 (33.2%) GO:0008483 (30.2%) GO:0004069 (3.3%)" amino acid metabolic process (33.2%) "pyridoxal phosphate binding (33.2%) transaminase activity (30.2%) L-aspartate:2-oxoglutarate aminotransferase activity (3.3%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" VIMEGLKDLGFVKGDPMEAVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25.6%) GO:0005829 (24.4%) "GO:0030145 (24.4%) GO:0070006 (24.4%) GO:0004177 (1.2%)" proteolysis (25.6%) cytosol (24.4%) "manganese ion binding (24.4%) metalloaminopeptidase activity (24.4%) aminopeptidase activity (1.2%)" "IPR000994 (20.4%) IPR036005 (20.4%) IPR052433 (20.4%)" "Peptidase M24 (20.4%) Creatinase/aminopeptidase-like (20.4%) Xaa-Pro dipeptidase-like (20.4%)" MNIYIGNLNYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0003723 (100%) RNA binding (100%) "IPR000504 (24.5%) IPR012677 (24.5%) IPR035979 (24.5%)" "RNA recognition motif domain (24.5%) Nucleotide-binding alpha-beta plait domain superfamily (24.5%) RNA-binding domain superfamily (24.5%)" LFLTKPLGIGVLTTAEKK root 2.7.9.3 (100%) selenide, water dikinase (100%) "GO:0016260 (20%) GO:0070329 (0%)" "GO:0005737 (20%) GO:0005829 (0%)" "GO:0004756 (20%) GO:0005524 (20%) GO:0000287 (19.2%)" "selenocysteine biosynthetic process (20%) tRNA seleno-modification (0%)" "cytoplasm (20%) cytosol (0%)" "selenide, water dikinase activity (20%) ATP binding (20%) magnesium ion binding (19.2%)" "IPR004536 (16.9%) IPR036676 (16.9%) IPR010918 (16.7%)" "Selenophosphate synthetase (16.9%) PurM-like, C-terminal domain superfamily (16.9%) PurM-like, C-terminal domain (16.7%)" RSDKIYYHHTGHIGGIK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006412 (19.9%) GO:0017148 (19.9%)" "GO:0022625 (19.9%) GO:0005840 (0.3%)" "GO:0003729 (19.9%) GO:0003735 (19.9%)" "translation (19.9%) negative regulation of translation (19.9%)" "cytosolic large ribosomal subunit (19.9%) ribosome (0.3%)" "mRNA binding (19.9%) structural constituent of ribosome (19.9%)" "IPR005822 (25%) IPR005823 (25%) IPR023563 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13, conserved site (25%)" KIEILVNFCPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20.1%) IPR018189 (20.1%) IPR035476 (20.1%)" "Phosphoglucose isomerase (PGI) (20.1%) Phosphoglucose isomerase, conserved site (20.1%) Phosphoglucose isomerase, SIS domain 1 (20.1%)" LIEEGKAYIDEQTSEQIAQQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (25%) GO:0005829 (25%) "GO:0004819 (25%) GO:0005524 (25%)" glutaminyl-tRNA aminoacylation (25%) cytosol (25%) "glutamine-tRNA ligase activity (25%) ATP binding (25%)" "IPR000924 (10.4%) IPR004514 (10.4%) IPR011035 (10.4%)" "Glutamyl/glutaminyl-tRNA synthetase (10.4%) Glutamine-tRNA synthetase (10.4%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (10.4%)" SYDHNLVDK Pseudomonadati Bacteria Pseudomonadati GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%) GO:0015935 (0%)" "GO:0003735 (20%) GO:0000049 (19.6%) GO:0003723 (0.4%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%) small ribosomal subunit (0%)" "structural constituent of ribosome (20%) tRNA binding (19.6%) RNA binding (0.4%)" "IPR001848 (25%) IPR027486 (25%) IPR036838 (25%)" "Small ribosomal subunit protein uS10 (25%) Small ribosomal subunit protein uS10 domain (25%) Small ribosomal subunit protein uS10 domain superfamily (25%)" STWAYTDDVYSVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.2.1.22 (100%) alpha-galactosidase (100%) "GO:0030246 (62.8%) GO:0016787 (34.9%) GO:0004557 (2.3%)" "carbohydrate binding (62.8%) hydrolase activity (34.9%) alpha-galactosidase activity (2.3%)" "IPR013785 (13.9%) IPR014718 (13.9%) IPR017853 (13.9%)" "Aldolase-type TIM barrel (13.9%) Glycoside hydrolase-type carbohydrate-binding (13.9%) Glycoside hydrolase superfamily (13.9%)" LHEEGVEFLSTGGTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (24.9%) GO:0005829 (24.9%) "GO:0003937 (24.9%) GO:0004643 (24.9%) GO:0016740 (0.4%)" 'de novo' IMP biosynthetic process (24.9%) cytosol (24.9%) "IMP cyclohydrolase activity (24.9%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (24.9%) transferase activity (0.4%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" ILTTPIKAEDLQDIR Bacteria Bacteria 4.2.1.32 (100%) L(+)-tartrate dehydratase (100%) "GO:0009408 (1%) GO:1901276 (1%)" "GO:0016020 (2%) GO:1902494 (1%)" "GO:0008730 (46.5%) GO:0016836 (43.6%) GO:0016829 (2%)" "response to heat (1%) tartrate catabolic process (1%)" "membrane (2%) catalytic complex (1%)" "L(+)-tartrate dehydratase activity (46.5%) hydro-lyase activity (43.6%) lyase activity (2%)" "IPR036660 (49.5%) IPR004647 (48.4%) IPR001898 (1.1%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (49.5%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (48.4%) Solute carrier family 13 (1.1%)" IFANPHLPGIDDYYEPFDFDYQNLHTAPEGSK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.7.5.1 (93.1%) 1.7.99.4 (6.9%)" "nitrate reductase (quinone) (93.1%) Transferred entry: 1.7.1.1, 1.7.1.2, 1.7.1.3, 1.7.5.1, 1.7.7.2 an1.9.6.1 (6.9%)" "GO:0019645 (10.3%) GO:0042128 (10.3%) GO:0009061 (0.8%)" "GO:0009325 (10.7%) GO:0005886 (10.2%) GO:0016020 (0.9%)" "GO:0009055 (11%) GO:0046872 (11%) GO:0051538 (11%)" "anaerobic electron transport chain (10.3%) nitrate assimilation (10.3%) anaerobic respiration (0.8%)" "nitrate reductase complex (10.7%) plasma membrane (10.2%) membrane (0.9%)" "electron transfer activity (11%) metal ion binding (11%) 3 iron, 4 sulfur cluster binding (11%)" "IPR017896 (25.7%) IPR006547 (25.3%) IPR029263 (24.5%)" "4Fe-4S ferredoxin-type, iron-sulphur binding domain (25.7%) Nitrate reductase, beta subunit (25.3%) Respiratory nitrate reductase beta, C-terminal (24.5%)" VLDYAKLPLAAER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR046228 (100%) Protein of unknown function DUF6261 (100%) INKDGIWIEKLDSNPGSLIPAELR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (19.8%) GO:0005829 (0.9%) "GO:0004333 (19.8%) GO:0042803 (19.8%) GO:0046872 (19.8%)" tricarboxylic acid cycle (19.8%) cytosol (0.9%) "fumarate hydratase activity (19.8%) protein homodimerization activity (19.8%) metal ion binding (19.8%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" NMKPADLNIDEIIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) KDLENAAILYDEIDRNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" ASTPLGVGGFGAAR root "2.3.1.179 (99.6%) 2.3.1.41 (0.3%) 2.3.1.- (0.1%)" "beta-ketoacyl-[acyl-carrier-protein] synthase II (99.6%) beta-ketoacyl-[acyl-carrier-protein] synthase I (0.3%) Transferring groups other than amino-acyl groups (0.1%)" "GO:0006633 (33%) GO:0006233 (0%) GO:0006260 (0%)" "GO:0005829 (32.9%) GO:0005886 (0%) GO:0009360 (0%)" "GO:0004315 (33%) GO:0016746 (0.1%) GO:0003677 (0%)" "fatty acid biosynthetic process (33%) dTDP biosynthetic process (0%) DNA replication (0%)" "cytosol (32.9%) plasma membrane (0%) DNA polymerase III complex (0%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (33%) acyltransferase activity (0.1%) DNA binding (0%)" "IPR000794 (14.3%) IPR014030 (14.3%) IPR016039 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Thiolase-like (14.3%)" GSPEASGLYITSSPGVLTGSDGYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR025049 (100%) Fimbrillin-like 1 (100%) MNQVLDDEKPDLVIFTGDIIYSKPALENMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0016788 (50%) cytoplasm (50%) hydrolase activity, acting on ester bonds (50%) "IPR004843 (33.3%) IPR011230 (33.3%) IPR029052 (33.3%)" "Calcineurin-like, phosphoesterase domain (33.3%) Probable inactive purple acid phosphatase 14/16/28/29 (33.3%) Metallo-dependent phosphatase-like (33.3%)" TKLKDVVSGYVLER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0043043 (33.3%) "GO:0005829 (31.4%) GO:0005737 (1.9%)" GO:0003746 (33.3%) peptide biosynthetic process (33.3%) "cytosol (31.4%) cytoplasm (1.9%)" translation elongation factor activity (33.3%) "IPR001059 (11.1%) IPR008991 (11.1%) IPR011768 (11.1%)" "Translation elongation factor P/YeiP, central (11.1%) Translation protein SH3-like domain superfamily (11.1%) Translation elongation factor P (11.1%)" HRVVEVPASNLKK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (16.8%) "GO:0005840 (16.8%) GO:1990904 (16.7%) GO:0005737 (16.3%)" "GO:0003735 (16.8%) GO:0019843 (16.4%)" translation (16.8%) "ribosome (16.8%) ribonucleoprotein complex (16.7%) cytoplasm (16.3%)" "structural constituent of ribosome (16.8%) rRNA binding (16.4%)" "IPR000630 (35.4%) IPR035987 (35.4%) IPR047863 (29.2%)" "Small ribosomal subunit protein uS8 (35.4%) Small ribosomal subunit protein uS8 superfamily (35.4%) Small ribosomal subunit protein uS8, conserved site (29.2%)" ETSCIVITHYQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003439 (25.6%) IPR010230 (25.6%) IPR027417 (25.6%)" "ABC transporter-like, ATP-binding domain (25.6%) FeS cluster assembly SUF system, ATPase SufC (25.6%) P-loop containing nucleoside triphosphate hydrolase (25.6%)" MQQLQNIIETAFER Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.3.1.117 (100%) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (100%) "GO:0009089 (19.6%) GO:0019877 (19.6%) GO:0009085 (0.1%)" "GO:0005737 (19.3%) GO:0005829 (0.1%)" "GO:0008666 (21.1%) GO:0016779 (19.4%) GO:0016746 (0.7%)" "lysine biosynthetic process via diaminopimelate (19.6%) diaminopimelate biosynthetic process (19.6%) lysine biosynthetic process (0.1%)" "cytoplasm (19.3%) cytosol (0.1%)" "2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity (21.1%) nucleotidyltransferase activity (19.4%) acyltransferase activity (0.7%)" "IPR037133 (17.4%) IPR023180 (17.3%) IPR011004 (17%)" "Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily (17.4%) Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 (17.3%) Trimeric LpxA-like superfamily (17%)" TYPNLIGNESAR Pseudomonadati Bacteria Pseudomonadati "3.2.1.22 (41%) 3.2.1.20 (22.9%) 3.2.1.3 (22.9%)" "alpha-galactosidase (41%) alpha-glucosidase (22.9%) glucan 1,4-alpha-glucosidase (22.9%)" GO:0005983 (0.1%) "GO:0005886 (0.1%) GO:0016020 (0.1%) GO:0042597 (0.1%)" "GO:0030246 (56.8%) GO:0016787 (35.8%) GO:0004557 (2.9%)" starch catabolic process (0.1%) "plasma membrane (0.1%) membrane (0.1%) periplasmic space (0.1%)" "carbohydrate binding (56.8%) hydrolase activity (35.8%) alpha-galactosidase activity (2.9%)" "IPR019563 (14.4%) IPR052720 (14.4%) IPR013785 (14.3%)" "Glycosyl-hydrolase 97, catalytic domain (14.4%) Glycosyl Hydrolase Family 97 (14.4%) Aldolase-type TIM barrel (14.3%)" DVVKTEEEFR Bacteroidota Bacteria Pseudomonadati Bacteroidota 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.8%) GO:0043335 (16.3%) GO:0051083 (16.3%)" "GO:0003755 (16.3%) GO:0043022 (16.3%) GO:0044183 (16.3%)" "protein transport (16.8%) protein unfolding (16.3%) 'de novo' cotranslational protein folding (16.3%)" "peptidyl-prolyl cis-trans isomerase activity (16.3%) ribosome binding (16.3%) protein folding chaperone (16.3%)" "IPR027304 (20.4%) IPR037041 (20.4%) IPR005215 (19.8%)" "Trigger factor/SurA domain superfamily (20.4%) Trigger factor, C-terminal domain superfamily (20.4%) Trigger factor (19.8%)" NLIEGIAAAMHFR root 1.1.1.17 (100%) mannitol-1-phosphate 5-dehydrogenase (100%) GO:0019592 (32.9%) GO:0005829 (32.9%) "GO:0008926 (33.8%) GO:0016491 (0.4%)" mannitol catabolic process (32.9%) cytosol (32.9%) "mannitol-1-phosphate 5-dehydrogenase activity (33.8%) oxidoreductase activity (0.4%)" "IPR013328 (13.3%) IPR013118 (13.1%) IPR008927 (13%)" "6-phosphogluconate dehydrogenase, domain 2 (13.3%) Mannitol dehydrogenase, C-terminal (13.1%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (13%)" ITTVGDAIAYIEANAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0009245 (20%) "GO:0005829 (20%) GO:0016020 (20%)" "GO:0000035 (20%) GO:0000036 (20%)" lipid A biosynthetic process (20%) "cytosol (20%) membrane (20%)" "acyl binding (20%) acyl carrier activity (20%)" "IPR003231 (25%) IPR006162 (25%) IPR009081 (25%)" "Acyl carrier protein (25%) Phosphopantetheine attachment site (25%) Phosphopantetheine binding ACP domain (25%)" AFAGADTLATSYALATAIKK Bacteria Bacteria "GO:0009055 (98.9%) GO:0016491 (1.1%)" "electron transfer activity (98.9%) oxidoreductase activity (1.1%)" "IPR012255 (20.1%) IPR014729 (20.1%) IPR014730 (20.1%)" "Electron transfer flavoprotein, beta subunit (20.1%) Rossmann-like alpha/beta/alpha sandwich fold (20.1%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (20.1%)" ALDMDAAASDGDTASSGDAK Bifidobacterium adolescentis Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium adolescentis GO:0005829 (27.3%) "GO:0015035 (54.5%) GO:0016853 (9.1%) GO:0047134 (9.1%)" cytosol (27.3%) "protein-disulfide reductase activity (54.5%) isomerase activity (9.1%) protein-disulfide reductase [NAD(P)H] activity (9.1%)" "IPR005746 (25.9%) IPR013766 (25.9%) IPR036249 (25.9%)" "Thioredoxin (25.9%) Thioredoxin domain (25.9%) Thioredoxin-like superfamily (25.9%)" KFDFIVVNYANGDMVGHTGIYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" ACEAECPKNISISNIAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.99.1 (58.3%) 1.3.5.1 (41.7%)" "Deleted entry (58.3%) succinate dehydrogenase (41.7%)" "GO:0009060 (23.7%) GO:0022904 (23.7%)" "GO:0009055 (23.7%) GO:0051537 (23.7%) GO:0016491 (2.3%)" "aerobic respiration (23.7%) respiratory electron transport chain (23.7%)" "electron transfer activity (23.7%) 2 iron, 2 sulfur cluster binding (23.7%) oxidoreductase activity (2.3%)" "IPR009051 (14.8%) IPR017896 (14.4%) IPR006058 (14.1%)" "Alpha-helical ferredoxin (14.8%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14.4%) 2Fe-2S ferredoxin, iron-sulphur binding site (14.1%)" ASAVNMPYVIER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" GYTIYGTHGTAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (14.1%) GO:0006526 (14.1%) GO:0006541 (14.1%)" GO:0005737 (14.1%) "GO:0004088 (14.1%) GO:0005524 (14.1%) GO:0046872 (14.1%)" "pyrimidine nucleotide biosynthetic process (14.1%) L-arginine biosynthetic process (14.1%) glutamine metabolic process (14.1%)" cytoplasm (14.1%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14.1%) ATP binding (14.1%) metal ion binding (14.1%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" VDIFTGTLGK root "2.3.1.29 (90.6%) 2.3.1.37 (7.8%) 2.3.1.50 (1.6%)" "glycine C-acetyltransferase (90.6%) 5-aminolevulinate synthase (7.8%) serine C-palmitoyltransferase (1.6%)" "GO:0019518 (13%) GO:0030148 (12.7%) GO:0006782 (1.4%)" "GO:0005829 (13.6%) GO:0016020 (12.7%) GO:0005759 (1.4%)" "GO:0030170 (15%) GO:0008890 (13.6%) GO:0004758 (6.6%)" "L-threonine catabolic process to glycine (13%) sphingolipid biosynthetic process (12.7%) protoporphyrinogen IX biosynthetic process (1.4%)" "cytosol (13.6%) membrane (12.7%) mitochondrial matrix (1.4%)" "pyridoxal phosphate binding (15%) glycine C-acetyltransferase activity (13.6%) serine C-palmitoyltransferase activity (6.6%)" "IPR004839 (16.4%) IPR015421 (16.4%) IPR015422 (16.4%)" "Aminotransferase, class I/classII, large domain (16.4%) Pyridoxal phosphate-dependent transferase, major domain (16.4%) Pyridoxal phosphate-dependent transferase, small domain (16.4%)" LAYEINKYNEGLYHIVNLSAEDDKAINEFDR Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus GO:0006412 (16.5%) "GO:0005840 (17.7%) GO:0005737 (16.5%) GO:1990904 (16.5%)" "GO:0003735 (16.5%) GO:0070181 (16.5%)" translation (16.5%) "ribosome (17.7%) cytoplasm (16.5%) ribonucleoprotein complex (16.5%)" "structural constituent of ribosome (16.5%) small ribosomal subunit rRNA binding (16.5%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" IIADIFEYTSQK Bacteria Bacteria 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (16.8%) IPR006099 (16.8%) IPR016176 (16.8%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.8%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.8%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (16.8%)" VLDGAVAAYCAVGGVEPQSETVWR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20%) GO:0005737 (19.5%) "GO:0003746 (20.5%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (19.5%) "translation elongation factor activity (20.5%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" TAADKQTPKPLPTDAEVEQAIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola NNNAPIKVVGYADKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (33.3%) "GO:0015288 (33.3%) GO:0030247 (33.3%)" cell outer membrane (33.3%) "porin activity (33.3%) polysaccharide binding (33.3%)" "IPR006665 (25%) IPR006690 (25%) IPR036737 (25%)" "OmpA-like domain (25%) Outer membrane protein, OmpA-like, conserved site (25%) OmpA-like domain superfamily (25%)" AAALQPGEVLLLENLR Bacteria Bacteria 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.2%) IPR015824 (33.2%) IPR036043 (33.2%)" "Phosphoglycerate kinase (33.2%) Phosphoglycerate kinase, N-terminal (33.2%) Phosphoglycerate kinase superfamily (33.2%)" LTAIDETTDADEASKEVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR007139 (100%) Protein of unknown function DUF349 (100%) LLAEHNLDASAIK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "2.3.1.61 (97.1%) 2.3.1.- (2.9%)" "dihydrolipoyllysine-residue succinyltransferase (97.1%) Transferring groups other than amino-acyl groups (2.9%)" "GO:0006099 (19.6%) GO:0033512 (18.7%) GO:0006086 (0.1%)" "GO:0005829 (19.6%) GO:0045252 (18.8%) GO:0005737 (0.7%)" "GO:0004149 (20.2%) GO:0031405 (0.7%) GO:0016407 (0.6%)" "tricarboxylic acid cycle (19.6%) L-lysine catabolic process to acetyl-CoA via saccharopine (18.7%) pyruvate decarboxylation to acetyl-CoA (0.1%)" "cytosol (19.6%) oxoglutarate dehydrogenase complex (18.8%) cytoplasm (0.7%)" "dihydrolipoyllysine-residue succinyltransferase activity (20.2%) lipoic acid binding (0.7%) acetyltransferase activity (0.6%)" "IPR004167 (11.4%) IPR036625 (11.4%) IPR000089 (11.2%)" "Peripheral subunit-binding domain (11.4%) E3-binding domain superfamily (11.4%) Biotin/lipoyl attachment (11.2%)" SGIDEGDIAKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" YVTNGSYLATIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.8.1 (64.3%) 1.3.8.- (21.4%) 1.3.8.7 (7.1%)" "short-chain acyl-CoA dehydrogenase (64.3%) With a flavin as acceptor (21.4%) medium-chain acyl-CoA dehydrogenase (7.1%)" "GO:0050660 (49.2%) GO:0003995 (45.7%) GO:0016937 (4.5%)" "flavin adenine dinucleotide binding (49.2%) acyl-CoA dehydrogenase activity (45.7%) short-chain fatty acyl-CoA dehydrogenase activity (4.5%)" "IPR006089 (9.2%) IPR009075 (9.2%) IPR020964 (9.2%)" "Acyl-CoA dehydrogenase, conserved site (9.2%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.2%) Acyl-CoA dehydrogenase, C-terminal (9.2%)" AQIPGGMYTNMVAQLK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "6.4.1.7 (75%) 2.1.3.1 (25%)" "2-oxoglutarate carboxylase (75%) methylmalonyl-CoA carboxytransferase (25%)" GO:0006094 (32.3%) GO:0005737 (32.3%) "GO:0004736 (32.3%) GO:0034029 (2.1%) GO:0047154 (1%)" gluconeogenesis (32.3%) cytoplasm (32.3%) "pyruvate carboxylase activity (32.3%) 2-oxoglutarate carboxylase activity (2.1%) methylmalonyl-CoA carboxytransferase activity (1%)" "IPR000891 (23.3%) IPR003379 (23.3%) IPR013785 (23.3%)" "Pyruvate carboxyltransferase (23.3%) Carboxylase, conserved domain (23.3%) Aldolase-type TIM barrel (23.3%)" SKNEVIADIVALLQSPAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (1.3%) "GO:0005840 (49.4%) GO:1990904 (47.5%) GO:0022625 (0.6%)" "GO:0003735 (0.6%) GO:0070180 (0.6%)" translation (1.3%) "ribosome (49.4%) ribonucleoprotein complex (47.5%) cytosolic large ribosomal subunit (0.6%)" "structural constituent of ribosome (0.6%) large ribosomal subunit rRNA binding (0.6%)" "IPR043141 (33.8%) IPR001790 (32.9%) IPR047865 (32.9%)" "Large ribosomal subunit protein uL10-like domain superfamily (33.8%) Large ribosomal subunit protein uL10 (32.9%) Large ribosomal subunit protein uL10, bacteria/organella (32.9%)" GWWDYGTGALGDMACHILHPVFK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (92.3%) GO:0050112 (7.7%)" "nucleotide binding (92.3%) inositol 2-dehydrogenase (NAD+) activity (7.7%)" "IPR000683 (17.6%) IPR036291 (17.6%) IPR043906 (17.6%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (17.6%) NAD(P)-binding domain superfamily (17.6%) Gfo/Idh/MocA-like oxidoreductase, bacterial type, C-terminal (17.6%)" NILPVLLEAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.1.1 (100%) asparaginase (100%) GO:0006528 (33.3%) "GO:0042597 (31%) GO:0030313 (2.4%)" GO:0004067 (33.3%) asparagine metabolic process (33.3%) "periplasmic space (31%) cell envelope (2.4%)" asparaginase activity (33.3%) "IPR004550 (11.3%) IPR006034 (11.3%) IPR027473 (11.3%)" "L-asparaginase, type II (11.3%) Asparaginase/glutaminase-like (11.3%) L-asparaginase, C-terminal (11.3%)" YSIENFRVEQK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.6%) GO:0006412 (0.1%)" "GO:0000428 (16.6%) GO:0005737 (16.5%) GO:0022625 (0.1%)" "GO:0003677 (16.6%) GO:0003899 (16.6%) GO:0046983 (16.6%)" "DNA-templated transcription (16.6%) translation (0.1%)" "DNA-directed RNA polymerase complex (16.6%) cytoplasm (16.5%) cytosolic large ribosomal subunit (0.1%)" "DNA binding (16.6%) DNA-directed RNA polymerase activity (16.6%) protein dimerization activity (16.6%)" "IPR011260 (16.6%) IPR011262 (16.6%) IPR011263 (16.6%)" "RNA polymerase, alpha subunit, C-terminal (16.6%) DNA-directed RNA polymerase, insert domain (16.6%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.6%)" TEHMFFEGEKIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0016301 (25.4%) GO:0050242 (25.4%) GO:0046872 (24.8%)" "kinase activity (25.4%) pyruvate, phosphate dikinase activity (25.4%) metal ion binding (24.8%)" "IPR000121 (10.2%) IPR010121 (10.2%) IPR015813 (10.2%)" "PEP-utilising enzyme, C-terminal (10.2%) Pyruvate, phosphate dikinase (10.2%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (10.2%)" TNIEALKEMLYER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (20%) "GO:0003924 (20%) GO:0005525 (20%) GO:0043022 (20%)" cytoplasm (20%) "GTPase activity (20%) GTP binding (20%) ribosome binding (20%)" "IPR006073 (14.3%) IPR016496 (14.3%) IPR025121 (14.3%)" "GTP binding domain (14.3%) GTPase HflX (14.3%) GTPase HflX, N-terminal (14.3%)" LAEGTPVIVPAGIEQDFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" TFTEKPELELAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.13 (100%) mannose-1-phosphate guanylyltransferase (100%) GO:0009298 (31.8%) "GO:0004475 (31.8%) GO:0005525 (30.3%) GO:0016853 (3.7%)" GDP-mannose biosynthetic process (31.8%) "mannose-1-phosphate guanylyltransferase (GTP) activity (31.8%) GTP binding (30.3%) isomerase activity (3.7%)" "IPR029044 (25.2%) IPR051161 (25.2%) IPR005835 (25%)" "Nucleotide-diphospho-sugar transferases (25.2%) Mannose-6-phosphate isomerase type 2 (25.2%) Nucleotidyl transferase domain (25%)" VDVFTGTLGK Pseudomonadati Bacteria Pseudomonadati 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (18.5%) GO:0030148 (11.1%)" "GO:0005829 (18.5%) GO:0016020 (11.1%)" "GO:0008890 (18.5%) GO:0030170 (18.5%) GO:0016874 (3.7%)" "L-threonine catabolic process to glycine (18.5%) sphingolipid biosynthetic process (11.1%)" "cytosol (18.5%) membrane (11.1%)" "glycine C-acetyltransferase activity (18.5%) pyridoxal phosphate binding (18.5%) ligase activity (3.7%)" "IPR004839 (15.6%) IPR011282 (15.6%) IPR015421 (15.6%)" "Aminotransferase, class I/classII, large domain (15.6%) 2-amino-3-ketobutyrate coenzyme A ligase (15.6%) Pyridoxal phosphate-dependent transferase, major domain (15.6%)" YHLCEYPLFINALAITK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.7%) GO:0006531 (24.7%)" GO:0005829 (24.7%) "GO:0008797 (24.7%) GO:0016853 (1.3%)" "tricarboxylic acid cycle (24.7%) aspartate metabolic process (24.7%)" cytosol (24.7%) "aspartate ammonia-lyase activity (24.7%) isomerase activity (1.3%)" "IPR000362 (12.6%) IPR008948 (12.6%) IPR018951 (12.6%)" "Fumarate lyase family (12.6%) L-Aspartase-like (12.6%) Fumarase C, C-terminal (12.6%)" KVVVDAGDSENLK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" HYVINDLPLGR Pseudomonadati Bacteria Pseudomonadati 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" KINHSISPMDNPSQIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001854 (50%) IPR036049 (50%)" "Large ribosomal subunit protein uL29 (50%) Large ribosomal subunit protein uL29 superfamily (50%)" LDGDPYCVIPEQMAIQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0003755 (100%) peptidyl-prolyl cis-trans isomerase activity (100%) "IPR000297 (20%) IPR023058 (20%) IPR027304 (20%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (20%) Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site (20%) Trigger factor/SurA domain superfamily (20%)" IAVMGCIVNGPGEMADADYGYVGAGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae AGDEGKLFGSIGTR root "GO:0006412 (19.9%) GO:0002181 (0%) GO:0032259 (0%)" "GO:0005840 (20.1%) GO:1990904 (19.9%) GO:0022625 (0.1%)" "GO:0003735 (20%) GO:0019843 (19.9%) GO:0008168 (0%)" "translation (19.9%) cytoplasmic translation (0%) methylation (0%)" "ribosome (20.1%) ribonucleoprotein complex (19.9%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (20%) rRNA binding (19.9%) methyltransferase activity (0%)" "IPR020069 (14.3%) IPR020594 (14.3%) IPR036791 (14.3%)" "Large ribosomal subunit protein bL9, C-terminal (14.3%) Large ribosomal subunit protein bL9, bacteria/chloroplast (14.3%) Large ribosomal subunit protein bL9, C-terminal domain superfamily (14.3%)" VNSSVIKPDNAATR Lactobacillaceae Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae GO:0006412 (32.6%) "GO:0015934 (22.8%) GO:0022625 (9.8%) GO:0005840 (2.2%)" GO:0003735 (32.6%) translation (32.6%) "large ribosomal subunit (22.8%) cytosolic large ribosomal subunit (9.8%) ribosome (2.2%)" structural constituent of ribosome (32.6%) "IPR005996 (33.3%) IPR016082 (33.3%) IPR036919 (33.3%)" "Large ribosomal subunit protein uL30, bacteria (33.3%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (33.3%) Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily (33.3%)" LMGAGPNPYGSKYPQPVGTDGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0009279 (100%) cell outer membrane (100%) "IPR008969 (14.3%) IPR012910 (14.3%) IPR023996 (14.3%)" "Carboxypeptidase-like, regulatory domain superfamily (14.3%) TonB-dependent receptor, plug domain (14.3%) TonB-dependent outer membrane protein, SusC/RagA (14.3%)" GVFAAGDVADPHYR root 1.8.1.9 (100%) thioredoxin-disulfide reductase (NADPH) (100%) "GO:0019430 (32.7%) GO:0045454 (0.2%)" GO:0005737 (32.7%) "GO:0004791 (33.6%) GO:0016491 (0.7%) GO:0016668 (0.2%)" "removal of superoxide radicals (32.7%) cell redox homeostasis (0.2%)" cytoplasm (32.7%) "thioredoxin-disulfide reductase (NADPH) activity (33.6%) oxidoreductase activity (0.7%) oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (0.2%)" "IPR036188 (20.4%) IPR050097 (20.4%) IPR023753 (20.3%)" "FAD/NAD(P)-binding domain superfamily (20.4%) Ferredoxin--NADP reductase type 2 (20.4%) FAD/NAD(P)-binding domain (20.3%)" MAELTEATQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016020 (100%) membrane (100%) "IPR019852 (50%) IPR055087 (50%)" "Gliding motility-associated protein, GldL (50%) Gliding motility protein GldL-like, N-terminal domain (50%)" SSTIFPQMVEHTIAVHDGR Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae "GO:0000028 (16.7%) GO:0006412 (16.7%)" "GO:0005737 (16.7%) GO:0015935 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16.7%)" "ribosomal small subunit assembly (16.7%) translation (16.7%)" "cytoplasm (16.7%) small ribosomal subunit (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR002222 (25%) IPR005732 (25%) IPR020934 (25%)" "Small ribosomal subunit protein uS19 (25%) Small ribosomal subunit protein uS19, bacteria (25%) Small ribosomal subunit protein uS19, conserved site (25%)" QILLARPIVALANK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (24.2%) IPR003714 (24.2%) IPR027417 (24.2%)" "PIN domain (24.2%) PhoH-like protein (24.2%) P-loop containing nucleoside triphosphate hydrolase (24.2%)" ALVLDLGGTNYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.1 (100%) hexokinase (100%) "GO:0001678 (13.6%) GO:0006006 (13.6%) GO:0006096 (13.6%)" GO:0005829 (5.1%) "GO:0004340 (13.6%) GO:0005524 (13.6%) GO:0005536 (13.6%)" "intracellular glucose homeostasis (13.6%) glucose metabolic process (13.6%) glycolytic process (13.6%)" cytosol (5.1%) "glucokinase activity (13.6%) ATP binding (13.6%) D-glucose binding (13.6%)" "IPR001312 (25.1%) IPR022672 (25.1%) IPR043129 (25.1%)" "Hexokinase (25.1%) Hexokinase, N-terminal (25.1%) ATPase, nucleotide binding domain (25.1%)" AGFVTSDSNLTPEHTLEDVLR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (25%) GO:0006183 (25%)" "GO:0003938 (25%) GO:0046872 (25%)" "GMP biosynthetic process (25%) GTP biosynthetic process (25%)" "IMP dehydrogenase activity (25%) metal ion binding (25%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" KDENGEITEVYCEYDPNTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.18 (100%) glutamine--tRNA ligase (100%) "GO:0006425 (24.4%) GO:0006424 (2.2%)" GO:0005829 (24.4%) "GO:0004819 (24.4%) GO:0005524 (24.4%)" "glutaminyl-tRNA aminoacylation (24.4%) glutamyl-tRNA aminoacylation (2.2%)" cytosol (24.4%) "glutamine-tRNA ligase activity (24.4%) ATP binding (24.4%)" "IPR000924 (10.8%) IPR004514 (10.8%) IPR011035 (10.8%)" "Glutamyl/glutaminyl-tRNA synthetase (10.8%) Glutamine-tRNA synthetase (10.8%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (10.8%)" TGSLNLYVMDLASGQIR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0017038 (33.1%) GO:0051301 (33%) GO:0015031 (0.1%)" "GO:0042597 (33.2%) GO:0016020 (0.1%) GO:0030288 (0.1%)" "GO:0016787 (0.1%) GO:0019904 (0.1%) GO:0044877 (0.1%)" "protein import (33.1%) cell division (33%) protein transport (0.1%)" "periplasmic space (33.2%) membrane (0.1%) outer membrane-bounded periplasmic space (0.1%)" "hydrolase activity (0.1%) protein domain specific binding (0.1%) protein-containing complex binding (0.1%)" "IPR011042 (25.2%) IPR011659 (25.2%) IPR014167 (24.9%)" "Six-bladed beta-propeller, TolB-like (25.2%) WD40-like beta-propeller (25.2%) Tol-Pal system protein TolB (24.9%)" QGLSATKYEECLALGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0009055 (23.3%) GO:0010181 (23.3%) GO:0016491 (23.3%)" "electron transfer activity (23.3%) FMN binding (23.3%) oxidoreductase activity (23.3%)" "IPR001226 (14.3%) IPR001279 (14.3%) IPR008254 (14.3%)" "Flavodoxin, conserved site (14.3%) Metallo-beta-lactamase (14.3%) Flavodoxin/nitric oxide synthase (14.3%)" FESEVYILSKDEGGR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0%) GO:0046677 (0%)" "GO:0005829 (19.2%) GO:0032045 (8.2%) GO:0005886 (0.9%)" "GO:0003746 (19.5%) GO:0005525 (19.3%) GO:0003924 (11.5%)" "translational elongation (0%) response to antibiotic (0%)" "cytosol (19.2%) guanyl-nucleotide exchange factor complex (8.2%) plasma membrane (0.9%)" "translation elongation factor activity (19.5%) GTP binding (19.3%) GTPase activity (11.5%)" "IPR050055 (11.7%) IPR004160 (11.6%) IPR009001 (11.5%)" "Elongation factor Tu GTPase (11.7%) Translation elongation factor EFTu/EF1A, C-terminal (11.6%) Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (11.5%)" HCAHDAIHLNNNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0051539 (100%) 4 iron, 4 sulfur cluster binding (100%) "IPR007160 (33.3%) IPR017896 (33.3%) IPR050157 (33.3%)" "Domain of unknown function DUF362 (33.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (33.3%) Photosystem I iron-sulfur center (33.3%)" EAYPHPYEALK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (24.5%) GO:0044208 (24.5%) GO:0006188 (5.7%)" "GO:0004018 (30.1%) GO:0070626 (15%) GO:0016829 (0.1%)" "'de novo' IMP biosynthetic process (24.5%) 'de novo' AMP biosynthetic process (24.5%) IMP biosynthetic process (5.7%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (30.1%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (15%) lyase activity (0.1%)" "IPR013539 (12.5%) IPR020557 (12.5%) IPR022761 (12.5%)" "Adenylosuccinate lyase PurB, C-terminal (12.5%) Fumarate lyase, conserved site (12.5%) Fumarate lyase, N-terminal (12.5%)" IGTVGDAVSYIEANAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0009245 (16.7%) "GO:0005829 (16.7%) GO:0016020 (16.7%)" "GO:0000035 (16.7%) GO:0000036 (16.7%) GO:0031177 (16.7%)" lipid A biosynthetic process (16.7%) "cytosol (16.7%) membrane (16.7%)" "acyl binding (16.7%) acyl carrier activity (16.7%) phosphopantetheine binding (16.7%)" "IPR009081 (20.9%) IPR036736 (20.9%) IPR003231 (19.4%)" "Phosphopantetheine binding ACP domain (20.9%) ACP-like superfamily (20.9%) Acyl carrier protein (19.4%)" AHASTALIADYFDTDNKMFGYLMEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" VKAETLTAYEDKVSDEPLISEKPQGGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.4.24.55 (66.7%) 3.4.24.- (33.3%)" "pitrilysin (66.7%) Metalloendopeptidases (33.3%)" GO:0006508 (34%) "GO:0004222 (34%) GO:0046872 (32%)" proteolysis (34%) "metalloendopeptidase activity (34%) metal ion binding (32%)" "IPR001431 (20.2%) IPR007863 (20.2%) IPR011765 (20.2%)" "Peptidase M16, zinc-binding site (20.2%) Peptidase M16, C-terminal (20.2%) Peptidase M16, N-terminal (20.2%)" PVEVKPEVR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria GO:0006950 (0.5%) "GO:0005829 (47.6%) GO:0005737 (0.5%)" "GO:0008861 (47.6%) GO:0003824 (1.9%) GO:0016829 (1.4%)" response to stress (0.5%) "cytosol (47.6%) cytoplasm (0.5%)" "formate C-acetyltransferase activity (47.6%) catalytic activity (1.9%) lyase activity (1.4%)" "IPR001150 (26%) IPR050244 (25%) IPR019777 (24.8%)" "Glycine radical domain (26%) Autonomous Glycyl Radical Cofactor (25%) Formate C-acetyltransferase glycine radical, conserved site (24.8%)" NGDKWEMVSVGPTTSMR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 4.2.1.32 (100%) L(+)-tartrate dehydratase (100%) "GO:0009408 (0.8%) GO:1901276 (0.8%)" "GO:0016020 (1.6%) GO:1902494 (0.8%)" "GO:0008730 (46%) GO:0016836 (43.5%) GO:0016829 (3.2%)" "response to heat (0.8%) tartrate catabolic process (0.8%)" "membrane (1.6%) catalytic complex (0.8%)" "L(+)-tartrate dehydratase activity (46%) hydro-lyase activity (43.5%) lyase activity (3.2%)" "IPR004647 (49.1%) IPR036660 (49.1%) IPR001898 (0.9%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (49.1%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (49.1%) Solute carrier family 13 (0.9%)" GAVPGATGSDLIVKPAVK root "GO:0006412 (24.8%) GO:0000027 (0.1%) GO:0002181 (0.1%)" "GO:0022625 (24.9%) GO:0005840 (0.7%) GO:0005737 (0.1%)" "GO:0003735 (24.9%) GO:0019843 (24.4%)" "translation (24.8%) ribosomal large subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic large ribosomal subunit (24.9%) ribosome (0.7%) cytoplasm (0.1%)" "structural constituent of ribosome (24.9%) rRNA binding (24.4%)" "IPR009000 (25.1%) IPR019927 (25.1%) IPR000597 (24.7%)" "Translation protein, beta-barrel domain superfamily (25.1%) Large ribosomal subunit protein uL3, bacteria/organella (25.1%) Large ribosomal subunit protein uL3 (24.7%)" GVMTNKEAAELK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (17.3%) "GO:0005840 (17.3%) GO:1990904 (17%) GO:0005737 (16.4%)" "GO:0003735 (17.3%) GO:0019843 (14.5%)" translation (17.3%) "ribosome (17.3%) ribonucleoprotein complex (17%) cytoplasm (16.4%)" "structural constituent of ribosome (17.3%) rRNA binding (14.5%)" "IPR000630 (33.3%) IPR035987 (33.3%) IPR047863 (33.3%)" "Small ribosomal subunit protein uS8 (33.3%) Small ribosomal subunit protein uS8 superfamily (33.3%) Small ribosomal subunit protein uS8, conserved site (33.3%)" IVYPAVAEAFPSLKA Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.1.1 (100%) alanine dehydrogenase (100%) GO:0042853 (25%) GO:0005886 (25%) "GO:0000166 (25%) GO:0000286 (25%)" L-alanine catabolic process (25%) plasma membrane (25%) "nucleotide binding (25%) alanine dehydrogenase activity (25%)" "IPR007698 (16.7%) IPR007886 (16.7%) IPR008141 (16.7%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (16.7%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (16.7%) Alanine dehydrogenase (16.7%)" RGMVICHPGQVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (19.9%) GO:0032045 (0.6%)" "GO:0003746 (19.9%) GO:0003924 (19.9%) GO:0005525 (19.9%)" "cytosol (19.9%) guanyl-nucleotide exchange factor complex (0.6%)" "translation elongation factor activity (19.9%) GTPase activity (19.9%) GTP binding (19.9%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" LAHYANAATDIEFEMPFGFKEVEGIHSR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.7%) GO:0015966 (12.2%) GO:0044281 (0.5%)" "GO:0005737 (12.7%) GO:0070062 (12.2%) GO:1990742 (12.2%)" "GO:0004820 (12.7%) GO:0005524 (12.7%) GO:0004081 (12.2%)" "glycyl-tRNA aminoacylation (12.7%) diadenosine tetraphosphate biosynthetic process (12.2%) small molecule metabolic process (0.5%)" "cytoplasm (12.7%) extracellular exosome (12.2%) microvesicle (12.2%)" "glycine-tRNA ligase activity (12.7%) ATP binding (12.7%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.2%)" "IPR004154 (11.2%) IPR006195 (11.2%) IPR027031 (11.2%)" "Anticodon-binding (11.2%) Aminoacyl-tRNA synthetase, class II (11.2%) Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 (11.2%)" AALESTLAAITESLK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0030261 (11.3%) GO:0006270 (10.9%) GO:0006351 (10.9%)" "GO:0005829 (11.3%) GO:1990103 (10.9%) GO:1990178 (10.9%)" "GO:0003677 (11.5%) GO:0030527 (11.3%) GO:0042802 (10.9%)" "chromosome condensation (11.3%) DNA replication initiation (10.9%) DNA-templated transcription (10.9%)" "cytosol (11.3%) DnaA-HU complex (10.9%) HU-DNA complex (10.9%)" "DNA binding (11.5%) structural constituent of chromatin (11.3%) identical protein binding (10.9%)" "IPR000119 (33.7%) IPR010992 (33.7%) IPR020816 (32.6%)" "Histone-like DNA-binding protein (33.7%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.7%) Histone-like DNA-binding protein, conserved site (32.6%)" MNNEFLQTEEAIVAMLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR002744 (27.8%) IPR034904 (27.8%) IPR052339 (27.8%)" "MIP18 family-like (27.8%) Fe-S cluster assembly domain superfamily (27.8%) Iron-Sulfur Protein Maturation MIP18 (27.8%)" LNHNELLSYPNTYDQVLFGTVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (48.9%) "GO:0004332 (48.9%) GO:0016829 (2.2%)" glycolytic process (48.9%) "fructose-bisphosphate aldolase activity (48.9%) lyase activity (2.2%)" "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" MNKAELIEALADKTGLQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" KVFEFADTAPLDELR Alistipes inops Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Rikenellaceae Alistipes Alistipes inops VCYDMSPKPNATIEWE Bacteria Bacteria 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0006177 (0.4%) GO:0005829 (33%) "GO:0003921 (33%) GO:0005524 (33%) GO:0016740 (0.4%)" GMP biosynthetic process (0.4%) cytosol (33%) "GMP synthase activity (33%) ATP binding (33%) transferase activity (0.4%)" "IPR001674 (17%) IPR025777 (16.8%) IPR014729 (16.6%)" "GMP synthase, C-terminal (17%) GMP synthetase ATP pyrophosphatase domain (16.8%) Rossmann-like alpha/beta/alpha sandwich fold (16.6%)" HVMSPAPFEVSAWQCLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "2.4.1.- (50%) 2.4.1.319 (50%)" "Hexosyltransferases (50%) beta-1,4-mannooligosaccharide phosphorylase (50%)" "GO:0016757 (66.7%) GO:0016798 (33.3%)" "glycosyltransferase activity (66.7%) hydrolase activity, acting on glycosyl bonds (33.3%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" YRTEKTDLSGNNTQAEAPQPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (10.9%) GO:0017038 (10.9%) GO:0043952 (10.9%)" "GO:0005829 (10.9%) GO:0005886 (10.9%) GO:0031522 (10.9%)" "GO:0005524 (10.9%) GO:0046872 (10.9%) GO:0008564 (1.6%)" "protein targeting (10.9%) protein import (10.9%) protein transport by the Sec complex (10.9%)" "cytosol (10.9%) plasma membrane (10.9%) cell envelope Sec protein transport complex (10.9%)" "ATP binding (10.9%) metal ion binding (10.9%) protein-exporting ATPase activity (1.6%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" SNPDGSICLHAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.99.- (37%) 5.4.99.23 (34.8%) 5.4.99.26 (26.1%)" "Transferring other groups (37%) 23S rRNA pseudouridine(1911/1915/1917) synthase (34.8%) tRNA pseudouridine(65) synthase (26.1%)" "GO:0001522 (21.2%) GO:0006396 (19.3%)" "GO:0003723 (21.2%) GO:0009982 (17.5%) GO:0140098 (16.9%)" "pseudouridine synthesis (21.2%) RNA processing (19.3%)" "RNA binding (21.2%) pseudouridine synthase activity (17.5%) catalytic activity, acting on RNA (16.9%)" "IPR006145 (31.9%) IPR020103 (31.9%) IPR050188 (31.9%)" "Pseudouridine synthase, RsuA/RluA-like (31.9%) Pseudouridine synthase, catalytic domain superfamily (31.9%) RluA Pseudouridine Synthase (31.9%)" VAIPVNPYDVFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR011542 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufD (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" GAFDVYDSEREK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) GO:0071897 (24.6%) "GO:0000166 (24.6%) GO:0004748 (24.6%) GO:0031419 (24.6%)" DNA biosynthetic process (24.6%) "nucleotide binding (24.6%) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (24.6%) cobalamin binding (24.6%)" "IPR000788 (33.3%) IPR013344 (33.3%) IPR050862 (33.3%)" "Ribonucleotide reductase large subunit, C-terminal (33.3%) Ribonucleotide reductase, adenosylcobalamin-dependent (33.3%) Ribonucleoside diphosphate reductase class-2 (33.3%)" EKPDYIVPEVEAIATR Pseudomonadati Bacteria Pseudomonadati 6.3.1.21 (100%) phosphoribosylglycinamide formyltransferase 2 (100%) GO:0006189 (16.7%) GO:0005829 (16.7%) "GO:0000287 (16.7%) GO:0004644 (16.7%) GO:0005524 (16.7%)" 'de novo' IMP biosynthetic process (16.7%) cytosol (16.7%) "magnesium ion binding (16.7%) phosphoribosylglycinamide formyltransferase activity (16.7%) ATP binding (16.7%)" "IPR003135 (12.5%) IPR005862 (12.5%) IPR011054 (12.5%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.5%) Formate-dependent phosphoribosylglycinamide formyltransferase (12.5%) Rudiment single hybrid motif (12.5%)" TTGEHEVSFQVHSEVFAK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006412 (19.6%) GO:0002181 (0.2%)" "GO:0005840 (20.5%) GO:1990904 (19.4%) GO:0005737 (0.2%)" "GO:0003735 (19.8%) GO:0019843 (19.4%) GO:0070180 (0.2%)" "translation (19.6%) cytoplasmic translation (0.2%)" "ribosome (20.5%) ribonucleoprotein complex (19.4%) cytoplasm (0.2%)" "structural constituent of ribosome (19.8%) rRNA binding (19.4%) large ribosomal subunit rRNA binding (0.2%)" "IPR020069 (14.5%) IPR036791 (14.5%) IPR020594 (14.4%)" "Large ribosomal subunit protein bL9, C-terminal (14.5%) Large ribosomal subunit protein bL9, C-terminal domain superfamily (14.5%) Large ribosomal subunit protein bL9, bacteria/chloroplast (14.4%)" IISAYKDNVAFAEGPVVEQFAPADHSKPDFFR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" IIDDVLAHGKER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (7.7%) IPR003029 (7.7%) IPR004087 (7.7%)" "Exoribonuclease, phosphorolytic domain 1 (7.7%) S1 domain (7.7%) K Homology domain (7.7%)" AMGGVCLNEGCIPTK Bacteria Bacteria 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (25.1%) GO:0005737 (24.4%) "GO:0004148 (25.1%) GO:0050660 (25.1%) GO:0016491 (0.4%)" 2-oxoglutarate metabolic process (25.1%) cytoplasm (24.4%) "dihydrolipoyl dehydrogenase (NADH) activity (25.1%) flavin adenine dinucleotide binding (25.1%) oxidoreductase activity (0.4%)" "IPR012999 (12.6%) IPR023753 (12.6%) IPR036188 (12.6%)" "Pyridine nucleotide-disulphide oxidoreductase, class I, active site (12.6%) FAD/NAD(P)-binding domain (12.6%) FAD/NAD(P)-binding domain superfamily (12.6%)" IVETVTNAGATVVGPVPLPTEK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0006412 (20%) "GO:0005840 (20.1%) GO:1990904 (20%)" "GO:0000049 (20%) GO:0003735 (20%)" translation (20%) "ribosome (20.1%) ribonucleoprotein complex (20%)" "tRNA binding (20%) structural constituent of ribosome (20%)" "IPR001848 (25%) IPR018268 (25%) IPR027486 (25%)" "Small ribosomal subunit protein uS10 (25%) Small ribosomal subunit protein uS10, conserved site (25%) Small ribosomal subunit protein uS10 domain (25%)" YNPALEAEGKNPFTLDSKEPNWDDFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "1.2.7.1 (70%) 1.2.7.- (30%)" "pyruvate synthase (70%) With an iron-sulfur protein as acceptor (30%)" "GO:0006979 (15.2%) GO:0022900 (15.2%) GO:0044281 (8.6%)" "GO:0005506 (15.2%) GO:0030976 (15.2%) GO:0051539 (15.2%)" "response to oxidative stress (15.2%) electron transport chain (15.2%) small molecule metabolic process (8.6%)" "iron ion binding (15.2%) thiamine pyrophosphate binding (15.2%) 4 iron, 4 sulfur cluster binding (15.2%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" NSLTTLPMGGGKGGSDFSPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.4.1.4 (83.3%) 1.4.1.3 (16.7%)" "glutamate dehydrogenase (NADP(+)) (83.3%) glutamate dehydrogenase [NAD(P)(+)] (16.7%)" GO:0006537 (25.8%) GO:0005829 (25.7%) "GO:0004354 (25.8%) GO:0000166 (22.4%) GO:0004352 (0.1%)" glutamate biosynthetic process (25.8%) cytosol (25.7%) "glutamate dehydrogenase (NADP+) activity (25.8%) nucleotide binding (22.4%) glutamate dehydrogenase (NAD+) activity (0.1%)" "IPR006097 (11.2%) IPR033524 (11.2%) IPR046346 (11.2%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.2%) Leu/Phe/Val dehydrogenases active site (11.2%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.2%)" AASEAVKDAALSCDQFFVNHR root "GO:0006412 (32.2%) GO:0000028 (0.5%) GO:0002181 (0.3%)" "GO:0022627 (32.4%) GO:0005840 (1.6%) GO:0005737 (0.3%)" "GO:0003735 (32.4%) GO:0008270 (0.3%)" "translation (32.2%) ribosomal small subunit assembly (0.5%) cytoplasmic translation (0.3%)" "cytosolic small ribosomal subunit (32.4%) ribosome (1.6%) cytoplasm (0.3%)" "structural constituent of ribosome (32.4%) zinc ion binding (0.3%)" "IPR001865 (25.1%) IPR005706 (25.1%) IPR023591 (25.1%)" "Small ribosomal subunit protein uS2 (25.1%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.1%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.1%)" SALEVVLTVLHAGGKFDK root "5.6.2.2 (98.8%) 5.99.1.3 (1.2%)" "DNA topoisomerase (ATP-hydrolyzing) (98.8%) Transferred entry: 5.6.2.2 (1.2%)" "GO:0006265 (12.5%) GO:0006261 (12.1%) GO:0032259 (0.4%)" "GO:0005694 (12.3%) GO:0005737 (12.1%)" "GO:0003677 (12.6%) GO:0005524 (12.6%) GO:0046872 (12.4%)" "DNA topological change (12.5%) DNA-templated DNA replication (12.1%) methylation (0.4%)" "chromosome (12.3%) cytoplasm (12.1%)" "DNA binding (12.6%) ATP binding (12.6%) metal ion binding (12.4%)" "IPR036890 (7.4%) IPR001241 (7.4%) IPR000565 (7.3%)" "Histidine kinase/HSP90-like ATPase superfamily (7.4%) DNA topoisomerase, type IIA (7.4%) DNA topoisomerase, type IIA, subunit B (7.3%)" GLPASPGAATGQIVFFADDAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" DGVAVMPDTEKVQELSGSDMAHWLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006508 (20%) GO:0009636 (20%) GO:0043418 (20%)" GO:0005737 (20%) GO:0070005 (20%) "proteolysis (20%) response to toxic substance (20%) homocysteine catabolic process (20%)" cytoplasm (20%) cysteine-type aminopeptidase activity (20%) "IPR000169 (33.3%) IPR004134 (33.3%) IPR038765 (33.3%)" "Cysteine peptidase, cysteine active site (33.3%) Peptidase C1B, bleomycin hydrolase (33.3%) Papain-like cysteine peptidase superfamily (33.3%)" TISANKATVNKEWVIVDAEGQTLGR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006412 (20%) GO:0017148 (20%)" GO:0022625 (20%) "GO:0003729 (20%) GO:0003735 (20%)" "translation (20%) negative regulation of translation (20%)" cytosolic large ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%)" "IPR005822 (25%) IPR005823 (25%) IPR023563 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13, conserved site (25%)" SQNVSNIIQMGGTILK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0016208 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) AMP binding (9.1%)" "IPR000023 (16.7%) IPR012003 (16.7%) IPR012828 (16.7%)" "Phosphofructokinase domain (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic (16.7%)" ARNAISYAKSHHYDLVIVDTAGR TGVQVLIRWAIQR EYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFR root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (24.8%) GO:0006098 (24.6%) GO:0009052 (0.2%)" "GO:0005829 (24.8%) GO:0016020 (0.2%)" "GO:0004801 (24.8%) GO:0016740 (0.4%) GO:0016744 (0.2%)" "carbohydrate metabolic process (24.8%) pentose-phosphate shunt (24.6%) pentose-phosphate shunt, non-oxidative branch (0.2%)" "cytosol (24.8%) membrane (0.2%)" "transaldolase activity (24.8%) transferase activity (0.4%) transketolase or transaldolase activity (0.2%)" "IPR001585 (25.3%) IPR013785 (25.3%) IPR004730 (24.7%)" "Transaldolase/Fructose-6-phosphate aldolase (25.3%) Aldolase-type TIM barrel (25.3%) Transaldolase type 1 (24.7%)" MKYDVAIIGGGPAGYTAAER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (25.3%) GO:0005737 (24.1%) "GO:0004148 (25.3%) GO:0050660 (25.3%)" 2-oxoglutarate metabolic process (25.3%) cytoplasm (24.1%) "dihydrolipoyl dehydrogenase (NADH) activity (25.3%) flavin adenine dinucleotide binding (25.3%)" "IPR012999 (12.8%) IPR023753 (12.8%) IPR036188 (12.8%)" "Pyridine nucleotide-disulphide oxidoreductase, class I, active site (12.8%) FAD/NAD(P)-binding domain (12.8%) FAD/NAD(P)-binding domain superfamily (12.8%)" AMNESNFEDLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.5%) GO:0015966 (12.5%)" "GO:0005737 (12.5%) GO:0070062 (12.5%) GO:1990742 (12.5%)" "GO:0004081 (12.5%) GO:0004820 (12.5%) GO:0005524 (12.5%)" "glycyl-tRNA aminoacylation (12.5%) diadenosine tetraphosphate biosynthetic process (12.5%)" "cytoplasm (12.5%) extracellular exosome (12.5%) microvesicle (12.5%)" "bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.5%) glycine-tRNA ligase activity (12.5%) ATP binding (12.5%)" "IPR002314 (11.1%) IPR002315 (11.1%) IPR004154 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Glycyl-tRNA synthetase (11.1%) Anticodon-binding (11.1%)" GFGFVELSDDELAKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0003723 (100%) RNA binding (100%) "IPR000504 (20%) IPR012677 (20%) IPR035979 (20%)" "RNA recognition motif domain (20%) Nucleotide-binding alpha-beta plait domain superfamily (20%) RNA-binding domain superfamily (20%)" LEEVKDLVEEIEKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016740 (100%) transferase activity (100%) "IPR002575 (33.3%) IPR011009 (33.3%) IPR050249 (33.3%)" "Aminoglycoside phosphotransferase (33.3%) Protein kinase-like domain superfamily (33.3%) Pseudomonas-type Homoserine Kinase (33.3%)" TVAKVDEAAEALK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25.1%) IPR005706 (25.1%) IPR023591 (25.1%)" "Small ribosomal subunit protein uS2 (25.1%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.1%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.1%)" QYPQCIEAYKESLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0035269 (50%) GO:0000030 (50%) protein O-linked glycosylation via mannose (50%) mannosyltransferase activity (50%) "IPR011990 (34.6%) IPR019734 (34.6%) IPR051685 (25%)" "Tetratricopeptide-like helical domain superfamily (34.6%) Tetratricopeptide repeat (34.6%) Ycf3/AcsC/BcsC/TPR Multifunctional (25%)" LGYPITDDLDIYTR root "GO:0034220 (20.1%) GO:0006811 (2.6%) GO:0006974 (0.1%)" "GO:0046930 (25.3%) GO:0009279 (25.1%) GO:0019867 (0.4%)" "GO:0015288 (25.3%) GO:0015075 (0.1%) GO:0042802 (0.1%)" "monoatomic ion transmembrane transport (20.1%) monoatomic ion transport (2.6%) DNA damage response (0.1%)" "pore complex (25.3%) cell outer membrane (25.1%) outer membrane (0.4%)" "porin activity (25.3%) monoatomic ion transmembrane transporter activity (0.1%) identical protein binding (0.1%)" "IPR000498 (13.4%) IPR011250 (13.4%) IPR002368 (13.3%)" "Outer membrane protein OmpA-like, transmembrane domain (13.4%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (13.4%) Outer membrane protein, OmpA (13.3%)" YVELFADKFNVPVLGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.2.4 (100%) AMP nucleosidase (100%) GO:0009116 (33.3%) GO:0005829 (33.3%) GO:0008714 (33.3%) nucleoside metabolic process (33.3%) cytosol (33.3%) AMP nucleosidase activity (33.3%) "IPR000845 (25%) IPR010944 (25%) IPR035994 (25%)" "Nucleoside phosphorylase domain (25%) AMP nucleosidase, putative (25%) Nucleoside phosphorylase superfamily (25%)" LAENGVELEMTETALNFLSQVGYDPEFGARPVKR SAVAKNPALAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" AHQQNIIPVVAEAIKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.234 (100%) N(6)-L-threonylcarbamoyladenine synthase (100%) "GO:0002949 (22.3%) GO:0006508 (5.4%)" GO:0005737 (22.3%) "GO:0005506 (21.5%) GO:0061711 (17.7%) GO:0008233 (5.4%)" "tRNA threonylcarbamoyladenosine modification (22.3%) proteolysis (5.4%)" cytoplasm (22.3%) "iron ion binding (21.5%) tRNA N(6)-L-threonylcarbamoyladenine synthase activity (17.7%) peptidase activity (5.4%)" "IPR000905 (20%) IPR017860 (20%) IPR017861 (20%)" "Gcp-like domain (20%) Peptidase M22, conserved site (20%) Kae1/TsaD family (20%)" AVEEGATITLSNTPIAVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" VDANESIAEIPSNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales FITIINNTLSDIRR root 2.3.1.12 (100%) dihydrolipoyllysine-residue acetyltransferase (100%) "GO:0006086 (20.1%) GO:0006090 (0.1%) GO:0042867 (0.1%)" "GO:0005737 (20.1%) GO:0045254 (18.6%)" "GO:0031405 (20.1%) GO:0004742 (19.6%) GO:0016407 (0.6%)" "pyruvate decarboxylation to acetyl-CoA (20.1%) pyruvate metabolic process (0.1%) pyruvate catabolic process (0.1%)" "cytoplasm (20.1%) pyruvate dehydrogenase complex (18.6%)" "lipoic acid binding (20.1%) dihydrolipoyllysine-residue acetyltransferase activity (19.6%) acetyltransferase activity (0.6%)" "IPR001078 (11.8%) IPR023213 (11.8%) IPR050743 (11.8%)" "2-oxoacid dehydrogenase acyltransferase, catalytic domain (11.8%) Chloramphenicol acetyltransferase-like domain superfamily (11.8%) 2-oxoacid dehydrogenase family, E2 component (11.8%)" GIQYTDGMIPEGVFKEGTIATLVDGTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0044718 (2.4%) GO:0009279 (92.9%) "GO:0004180 (2.4%) GO:0015344 (2.4%)" siderophore transmembrane transport (2.4%) cell outer membrane (92.9%) "carboxypeptidase activity (2.4%) siderophore uptake transmembrane transporter activity (2.4%)" "IPR039426 (14.9%) IPR012910 (14.6%) IPR023996 (14.6%)" "TonB-dependent receptor-like (14.9%) TonB-dependent receptor, plug domain (14.6%) TonB-dependent outer membrane protein, SusC/RagA (14.6%)" AYNNLGELAFAAGDAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" LKEELFDQVDIDPANIYCPDGSMPKDAILDFCR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.3%) GO:0006044 (32.3%)" "GO:0004342 (32.3%) GO:0016853 (3.2%)" "carbohydrate metabolic process (32.3%) N-acetylglucosamine metabolic process (32.3%)" "glucosamine-6-phosphate deaminase activity (32.3%) isomerase activity (3.2%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" ANATAPAINVIETDKAYKLELAAPGMTK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" GLTASTGLDALTHAIEGLITK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.77 (100%) lactaldehyde reductase (100%) "GO:0004022 (38.2%) GO:0046872 (38.2%) GO:0008912 (23.6%)" "alcohol dehydrogenase (NAD+) activity (38.2%) metal ion binding (38.2%) lactaldehyde reductase activity (23.6%)" "IPR001670 (20%) IPR013460 (20%) IPR018211 (20%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (20%) Lactaldehyde reductase (20%) Alcohol dehydrogenase, iron-type, conserved site (20%)" AKETDAELVMASDPDADR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (24.3%) GO:0006166 (24.3%)" "GO:0000287 (24.3%) GO:0008973 (24.3%) GO:0004614 (2.9%)" "carbohydrate metabolic process (24.3%) purine ribonucleoside salvage (24.3%)" "magnesium ion binding (24.3%) phosphopentomutase activity (24.3%) phosphoglucomutase activity (2.9%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" QEAAAPAPAAK root "2.3.1.12 (98.7%) 2.3.1.- (1.3%)" "dihydrolipoyllysine-residue acetyltransferase (98.7%) Transferring groups other than amino-acyl groups (1.3%)" "GO:0006086 (20.1%) GO:0006090 (0%) GO:0042867 (0%)" "GO:0005737 (20.1%) GO:0045254 (19.3%)" "GO:0031405 (20.1%) GO:0004742 (19.9%) GO:0016407 (0.2%)" "pyruvate decarboxylation to acetyl-CoA (20.1%) pyruvate metabolic process (0%) pyruvate catabolic process (0%)" "cytoplasm (20.1%) pyruvate dehydrogenase complex (19.3%)" "lipoic acid binding (20.1%) dihydrolipoyllysine-residue acetyltransferase activity (19.9%) acetyltransferase activity (0.2%)" "IPR050743 (11.4%) IPR004167 (11.3%) IPR036625 (11.3%)" "2-oxoacid dehydrogenase family, E2 component (11.4%) Peripheral subunit-binding domain (11.3%) E3-binding domain superfamily (11.3%)" GEIVVNPSEDEIAAAEAAK Bifidobacterium adolescentis Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium adolescentis 2.7.3.9 (100%) phosphoenolpyruvate--protein phosphotransferase (100%) GO:0009401 (20%) GO:0005737 (20%) "GO:0008965 (20%) GO:0016301 (20%) GO:0046872 (20%)" phosphoenolpyruvate-dependent sugar phosphotransferase system (20%) cytoplasm (20%) "phosphoenolpyruvate-protein phosphotransferase activity (20%) kinase activity (20%) metal ion binding (20%)" "IPR000121 (8.3%) IPR006318 (8.3%) IPR008279 (8.3%)" "PEP-utilising enzyme, C-terminal (8.3%) Phosphotransferase system, enzyme I-like (8.3%) PEP-utilising enzyme, mobile domain (8.3%)" KAMQEENVVAVAK Longicatena caecimuris Bacteria Bacillati Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Longicatena Longicatena caecimuris "GO:0006303 (33.3%) GO:0006310 (33.3%)" GO:0003690 (33.3%) "double-strand break repair via nonhomologous end joining (33.3%) DNA recombination (33.3%)" double-stranded DNA binding (33.3%) "IPR006164 (33.3%) IPR009187 (33.3%) IPR016194 (33.3%)" "Ku70/Ku80, DNA-binding domain (33.3%) Non-homologous end joining protein Ku, prokaryotic type (33.3%) SPOC-like, C-terminal domain superfamily (33.3%)" AGELLKENGFNFDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.2.11 (95.5%) 5.4.2.1 (4.5%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (95.5%) Transferred entry: 5.4.2.11 and 5.4.2.12 (4.5%)" "GO:0006094 (33.3%) GO:0006096 (33.3%)" GO:0004619 (33.3%) "gluconeogenesis (33.3%) glycolytic process (33.3%)" phosphoglycerate mutase activity (33.3%) "IPR001345 (25%) IPR005952 (25%) IPR013078 (25%)" "Phosphoglycerate/bisphosphoglycerate mutase, active site (25%) Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%)" DYFGAHTYER root "1.1.1.44 (99.2%) 1.1.1.343 (0.7%) 2.3.1.225 (0%)" "phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (99.2%) phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) (0.7%) protein S-acyltransferase (0%)" "GO:0019521 (23.2%) GO:0006098 (22.4%) GO:0009409 (1.3%)" "GO:0005829 (1.4%) GO:0016020 (0.1%) GO:0005777 (0%)" "GO:0004616 (23.2%) GO:0050661 (22.4%) GO:0016491 (0.2%)" "D-gluconate metabolic process (23.2%) pentose-phosphate shunt (22.4%) response to cold (1.3%)" "cytosol (1.4%) membrane (0.1%) peroxisome (0%)" "phosphogluconate dehydrogenase (decarboxylating) activity (23.2%) NADP binding (22.4%) oxidoreductase activity (0.2%)" "IPR006114 (13.2%) IPR006183 (13.2%) IPR008927 (13.1%)" "6-phosphogluconate dehydrogenase, C-terminal (13.2%) 6-phosphogluconate dehydrogenase (13.2%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (13.1%)" TLEEVLALPMGDATVAQAVTDRTGITGEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" AIVDNMTELCGSTPQLIDELYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" DKTSTESEPVYTGGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" FNNFINDSLLEGAIDALKR root "2.5.1.78 (97.2%) 2.5.1.9 (1.7%) 1.1.1.193 (0.3%)" "6,7-dimethyl-8-ribityllumazine synthase (97.2%) riboflavin synthase (1.7%) 5-amino-6-(5-phosphoribosylamino)uracil reductase (0.3%)" "GO:0009231 (24.2%) GO:0006353 (0.1%) GO:0009228 (0.1%)" "GO:0009349 (24.2%) GO:0005829 (23.9%) GO:0005737 (0.1%)" "GO:0000906 (24%) GO:0016874 (1.6%) GO:0016740 (0.4%)" "riboflavin biosynthetic process (24.2%) DNA-templated transcription termination (0.1%) thiamine biosynthetic process (0.1%)" "riboflavin synthase complex (24.2%) cytosol (23.9%) cytoplasm (0.1%)" "6,7-dimethyl-8-ribityllumazine synthase activity (24%) ligase activity (1.6%) transferase activity (0.4%)" "IPR036467 (32.7%) IPR002180 (32.5%) IPR034964 (32.4%)" "Lumazine/riboflavin synthase superfamily (32.7%) Lumazine/riboflavin synthase (32.5%) Lumazine synthase (32.4%)" TCNIVSLHIPATAETK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (43.2%) GO:0016616 (38.6%) GO:0016787 (13.6%)" "NAD binding (43.2%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (38.6%) hydrolase activity (13.6%)" "IPR006139 (33.3%) IPR006140 (33.3%) IPR036291 (33.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" TFDDKAPETVKNFLDYCR root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (33.1%) GO:0009245 (0.1%) GO:0061077 (0.1%)" "GO:0005737 (32.5%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0003755 (33.4%) GO:0016853 (0.6%) GO:0008758 (0.1%)" "protein folding (33.1%) lipid A biosynthetic process (0.1%) obsolete chaperone-mediated protein folding (0.1%)" "cytoplasm (32.5%) cytosol (0.1%) plasma membrane (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (33.4%) isomerase activity (0.6%) UDP-2,3-diacylglucosamine hydrolase activity (0.1%)" "IPR002130 (20.1%) IPR029000 (20.1%) IPR020892 (20%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (20.1%) Cyclophilin-like domain superfamily (20.1%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (20%)" TDIDLVYIAADWLHHFPVAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0000166 (50%) GO:0016798 (50%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (50%)" "IPR000683 (25%) IPR036291 (25%) IPR049303 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) NAD(P)-binding domain superfamily (25%) Glycosyl hydrolase 109, C-terminal domain (25%)" RVTITIAADSIETAVKSELVNVAKK Bacteria Bacteria 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.5%) GO:0043335 (12.4%) GO:0051083 (12.4%)" "GO:0005737 (12.1%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003755 (12.4%) GO:0043022 (12.4%) GO:0044183 (12.4%)" "protein transport (12.5%) protein unfolding (12.4%) 'de novo' cotranslational protein folding (12.4%)" "cytoplasm (12.1%) cytosol (0%) membrane (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.4%) ribosome binding (12.4%) protein folding chaperone (12.4%)" "IPR008881 (12.7%) IPR036611 (12.7%) IPR005215 (12.6%)" "Trigger factor, ribosome-binding, bacterial (12.7%) Trigger factor ribosome-binding domain superfamily (12.7%) Trigger factor (12.6%)" YTEQFHKPVIFVVNQLDNDKADYEGTIAQLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" SDVQGEFEEHAEEERHHAQLLADR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006879 (20%) GO:0005829 (20%) "GO:0004322 (20%) GO:0008199 (20%) GO:0020037 (20%)" intracellular iron ion homeostasis (20%) cytosol (20%) "ferroxidase activity (20%) ferric iron binding (20%) heme binding (20%)" "IPR008331 (16.7%) IPR009040 (16.7%) IPR009078 (16.7%)" "Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%) Ferritin-like superfamily (16.7%)" IMIDHHLYPEDFCR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.1.-.- (100%) Acting on ester bonds (100%) "GO:0003676 (88.2%) GO:0016787 (5.9%) GO:0046872 (5.9%)" "nucleic acid binding (88.2%) hydrolase activity (5.9%) metal ion binding (5.9%)" "IPR001667 (25%) IPR003156 (25%) IPR038763 (25%)" "DDH domain (25%) DHHA1 domain (25%) DHH phosphoesterase superfamily (25%)" AVSGMYLGDILK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.1 (100%) hexokinase (100%) "GO:0001678 (14.1%) GO:0006096 (13.8%) GO:0006006 (11.1%)" GO:0005829 (7.5%) "GO:0005524 (14.1%) GO:0005536 (14.1%) GO:0004340 (11.1%)" "intracellular glucose homeostasis (14.1%) glycolytic process (13.8%) glucose metabolic process (11.1%)" cytosol (7.5%) "ATP binding (14.1%) D-glucose binding (14.1%) glucokinase activity (11.1%)" "IPR001312 (25%) IPR022672 (25%) IPR022673 (25%)" "Hexokinase (25%) Hexokinase, N-terminal (25%) Hexokinase, C-terminal (25%)" ILIPTVNDVSAEHEQALGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.9.1.- (100%) Acting on phosphorus-nitrogen bonds (100%) GO:0055130 (0.6%) "GO:0005737 (0.6%) GO:0005829 (0.6%)" "GO:0000166 (47.5%) GO:0016787 (46.9%) GO:0003824 (1.9%)" D-alanine catabolic process (0.6%) "cytoplasm (0.6%) cytosol (0.6%)" "nucleotide binding (47.5%) hydrolase activity (46.9%) catalytic activity (1.9%)" "IPR001310 (25.2%) IPR011146 (25.2%) IPR036265 (25.2%)" "Histidine triad (HIT) protein (25.2%) HIT-like domain (25.2%) HIT-like superfamily (25.2%)" IELLEPTCPESTIAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.1.99.1 (97.4%) 4.4.1.5 (2.6%)" "methylmalonyl-CoA epimerase (97.4%) lactoylglutathione lyase (2.6%)" GO:0046491 (45.8%) "GO:0004493 (45.8%) GO:0016829 (6.5%) GO:0004462 (0.9%)" L-methylmalonyl-CoA metabolic process (45.8%) "methylmalonyl-CoA epimerase activity (45.8%) lyase activity (6.5%) lactoylglutathione lyase activity (0.9%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" MATIDKLTNDGTYSNLSKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.2%) "GO:0022627 (32.8%) GO:0005840 (0.8%)" GO:0003735 (33.2%) translation (33.2%) "cytosolic small ribosomal subunit (32.8%) ribosome (0.8%)" structural constituent of ribosome (33.2%) "IPR001865 (25.2%) IPR023591 (25.2%) IPR005706 (24.9%)" "Small ribosomal subunit protein uS2 (25.2%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.2%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (24.9%)" TRPCNFHPHLKK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006777 (33.4%) GO:0034214 (0.1%)" GO:0005829 (33.4%) "GO:0005525 (32.9%) GO:0016779 (0.1%) GO:0016829 (0.1%)" "Mo-molybdopterin cofactor biosynthetic process (33.4%) protein hexamerization (0.1%)" cytosol (33.4%) "GTP binding (32.9%) nucleotidyltransferase activity (0.1%) lyase activity (0.1%)" "IPR012245 (20.4%) IPR001453 (20.4%) IPR036425 (20.4%)" "Molybdenum cofactor biosynthesis protein MoaB (20.4%) MoaB/Mog domain (20.4%) MoaB/Mog-like domain superfamily (20.4%)" MQEEGIYVTGFYYPVVPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.29 (99.5%) 2.3.1.50 (0.5%)" "glycine C-acetyltransferase (99.5%) serine C-palmitoyltransferase (0.5%)" "GO:0030148 (13.9%) GO:0019518 (13.9%) GO:0006567 (0.6%)" "GO:0005829 (14.4%) GO:0016020 (13.9%)" "GO:0008890 (14.5%) GO:0030170 (14.5%) GO:0004758 (7.7%)" "sphingolipid biosynthetic process (13.9%) L-threonine catabolic process to glycine (13.9%) L-threonine catabolic process (0.6%)" "cytosol (14.4%) membrane (13.9%)" "glycine C-acetyltransferase activity (14.5%) pyridoxal phosphate binding (14.5%) serine C-palmitoyltransferase activity (7.7%)" "IPR004839 (16.7%) IPR015422 (16.7%) IPR015424 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%) Pyridoxal phosphate-dependent transferase (16.7%)" LEVVTPEENMGDVIGDLNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.5%) GO:0005737 (18.5%) "GO:0003746 (20.7%) GO:0005525 (20.5%) GO:0003924 (19.8%)" ribosome disassembly (20.5%) cytoplasm (18.5%) "translation elongation factor activity (20.7%) GTP binding (20.5%) GTPase activity (19.8%)" "IPR000640 (6.4%) IPR005517 (6.4%) IPR014721 (6.4%)" "Elongation factor EFG, domain V-like (6.4%) Translation elongation factor EFG/EF2, domain IV (6.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.4%)" DCMAALNMVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.2.1.49 (75%) 3.2.1.- (25%)" "alpha-N-acetylgalactosaminidase (75%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (25%)" "GO:0000166 (50%) GO:0016798 (46.4%) GO:0008456 (3.6%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (46.4%) alpha-N-acetylgalactosaminidase activity (3.6%)" "IPR000683 (17.5%) IPR006311 (17.5%) IPR036291 (17.5%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (17.5%) Twin-arginine translocation pathway, signal sequence (17.5%) NAD(P)-binding domain superfamily (17.5%)" MKVDEMVTVR root 3.5.4.16 (100%) GTP cyclohydrolase I (100%) "GO:0046654 (14.3%) GO:0006729 (14.2%) GO:0006730 (14.2%)" "GO:0005737 (14.2%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003934 (14.3%) GO:0005525 (14.2%) GO:0008270 (14.2%)" "tetrahydrofolate biosynthetic process (14.3%) tetrahydrobiopterin biosynthetic process (14.2%) one-carbon metabolic process (14.2%)" "cytoplasm (14.2%) cytosol (0%) membrane (0%)" "GTP cyclohydrolase I activity (14.3%) GTP binding (14.2%) zinc ion binding (14.2%)" "IPR020602 (20%) IPR001474 (20%) IPR018234 (20%)" "GTP cyclohydrolase I domain (20%) GTP cyclohydrolase I (20%) GTP cyclohydrolase I, conserved site (20%)" KVDELNNDPDVDGFIVQLPLPK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "1.5.1.5 (50%) 3.5.4.9 (50%)" "methylenetetrahydrofolate dehydrogenase (NADP(+)) (50%) methenyltetrahydrofolate cyclohydrolase (50%)" "GO:0000105 (14.3%) GO:0006164 (14.3%) GO:0009086 (14.3%)" GO:0005829 (14.3%) "GO:0004477 (14.3%) GO:0004488 (14.3%)" "L-histidine biosynthetic process (14.3%) purine nucleotide biosynthetic process (14.3%) methionine biosynthetic process (14.3%)" cytosol (14.3%) "methenyltetrahydrofolate cyclohydrolase activity (14.3%) methylenetetrahydrofolate dehydrogenase (NADP+) activity (14.3%)" "IPR000672 (16.7%) IPR020630 (16.7%) IPR020631 (16.7%)" "Tetrahydrofolate dehydrogenase/cyclohydrolase (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (16.7%)" SQEAVQEAVNLTQAR root "GO:0034605 (20%) GO:0042026 (20%)" GO:0005737 (20%) "GO:0005524 (20%) GO:0016887 (20%)" "cellular response to heat (20%) protein refolding (20%)" cytoplasm (20%) "ATP binding (20%) ATP hydrolysis activity (20%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" ILGTVDELQETGEDLNVPYIVGETVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006353 (20%) GO:0006354 (20%) GO:0031564 (20%)" GO:0005829 (20%) "DNA-templated transcription termination (20%) DNA-templated transcription elongation (20%) transcription antitermination (20%)" cytosol (20%) "IPR001062 (12.5%) IPR005824 (12.5%) IPR006645 (12.5%)" "Transcription antitermination protein, NusG (12.5%) KOW (12.5%) NusG-like, N-terminal (12.5%)" QGLESQAEQQMK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.3.4.1 (100%) protein disulfide-isomerase (100%) GO:0042597 (57.7%) GO:0016853 (42.3%) periplasmic space (57.7%) isomerase activity (42.3%) "IPR012336 (14.5%) IPR017937 (14.5%) IPR033954 (14.5%)" "Thioredoxin-like fold (14.5%) Thioredoxin, conserved site (14.5%) Disulphide bond isomerase, DsbC/G (14.5%)" ENLEALLVALKK root "GO:0006417 (16.8%) GO:0006412 (16.4%) GO:0000027 (0%)" "GO:0022625 (16.8%) GO:0005840 (0.3%) GO:0005737 (0%)" "GO:0000049 (16.5%) GO:0003735 (16.5%) GO:0019843 (16.5%)" "regulation of translation (16.8%) translation (16.4%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (16.8%) ribosome (0.3%) cytoplasm (0%)" "tRNA binding (16.5%) structural constituent of ribosome (16.5%) rRNA binding (16.5%)" "IPR023674 (16.9%) IPR028364 (16.9%) IPR016095 (16.7%)" "Ribosomal protein uL1-like (16.9%) Ribosomal protein uL1/ribosomal biogenesis protein (16.9%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" YYLGNADEIAAK root "5.4.2.11 (98.4%) 5.4.2.- (0.8%) 5.4.2.1 (0.7%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (98.4%) Phosphotransferases (phosphomutases) (0.8%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.7%)" "GO:0006096 (33.2%) GO:0006094 (32.9%) GO:0061621 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004619 (32.8%) GO:0016868 (0.5%) GO:0016853 (0.4%)" "glycolytic process (33.2%) gluconeogenesis (32.9%) canonical glycolysis (0%)" "cytoplasm (0%) cytosol (0%)" "phosphoglycerate mutase activity (32.8%) intramolecular phosphotransferase activity (0.5%) isomerase activity (0.4%)" "IPR029033 (25.3%) IPR005952 (25.2%) IPR013078 (25%)" "Histidine phosphatase superfamily (25.3%) Phosphoglycerate mutase 1 (25.2%) Histidine phosphatase superfamily, clade-1 (25%)" QGALVNKGDALAYVER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.1.3.1 (50%) 4.1.1.3 (50%)" "methylmalonyl-CoA carboxytransferase (50%) Transferred entry: 4.1.1.112 and 7.2.4.2 (50%)" "GO:0003824 (87.5%) GO:0047154 (8.3%) GO:0016829 (4.2%)" "catalytic activity (87.5%) methylmalonyl-CoA carboxytransferase activity (8.3%) lyase activity (4.2%)" "IPR050709 (25.5%) IPR000891 (24.5%) IPR003379 (24.5%)" "Biotin Carboxyl Carrier/Decarboxylase Components (25.5%) Pyruvate carboxyltransferase (24.5%) Carboxylase, conserved domain (24.5%)" KHNYSIVDEVDSVLIDDAR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (1.4%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (1.4%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" SLLNGVLMQEKDLSIQGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" YFRPAEVEQLLGNPTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.47 (100%) GDP-mannose 4,6-dehydratase (100%) GO:0042351 (33.8%) "GO:0008446 (33.8%) GO:0070401 (32.5%)" 'de novo' GDP-L-fucose biosynthetic process (33.8%) "GDP-mannose 4,6-dehydratase activity (33.8%) NADP+ binding (32.5%)" "IPR006368 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "GDP-mannose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" ITFIDGDEGILLHR root "2.3.3.16 (56.8%) 2.3.3.1 (42.3%) 2.3.3.- (0.9%)" "citrate synthase (unknown stereospecificity) (56.8%) citrate (Si)-synthase (42.3%) Acyl groups converted into alkyl groups on transfer (0.9%)" "GO:0006099 (32.6%) GO:0034214 (0%)" "GO:0005737 (32.5%) GO:0016020 (0.1%) GO:0005759 (0%)" "GO:0036440 (26.6%) GO:0046912 (7.6%) GO:0016746 (0.2%)" "tricarboxylic acid cycle (32.6%) protein hexamerization (0%)" "cytoplasm (32.5%) membrane (0.1%) mitochondrial matrix (0%)" "citrate synthase activity (26.6%) acyltransferase activity, acyl groups converted into alkyl on transfer (7.6%) acyltransferase activity (0.2%)" "IPR002020 (14.7%) IPR036969 (14.7%) IPR016142 (14.7%)" "Citrate synthase (14.7%) Citrate synthase superfamily (14.7%) Citrate synthase-like, large alpha subdomain (14.7%)" DDCISAHANQSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.4.-.- (97.8%) 3.4.13.- (2.2%)" "Acting on peptide bonds (peptidases) (97.8%) Dipeptidases (2.2%)" GO:0006508 (33.3%) "GO:0016805 (33.5%) GO:0070004 (33.3%)" proteolysis (33.3%) "dipeptidase activity (33.5%) cysteine-type exopeptidase activity (33.3%)" IPR005322 (100%) Peptidase C69 (100%) AVPDVQAALNEAEEKGVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (42.9%) "GO:0004493 (42.9%) GO:0016829 (7.1%) GO:0051213 (7.1%)" L-methylmalonyl-CoA metabolic process (42.9%) "methylmalonyl-CoA epimerase activity (42.9%) lyase activity (7.1%) dioxygenase activity (7.1%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" YKDLGLVNTK root 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.6%) GO:0030388 (24.6%) GO:0005975 (0.4%)" GO:0016020 (0.4%) "GO:0008270 (25%) GO:0004332 (24.6%) GO:0016832 (0.4%)" "glycolytic process (24.6%) fructose 1,6-bisphosphate metabolic process (24.6%) carbohydrate metabolic process (0.4%)" membrane (0.4%) "zinc ion binding (25%) fructose-bisphosphate aldolase activity (24.6%) aldehyde-lyase activity (0.4%)" "IPR000771 (25.1%) IPR013785 (25.1%) IPR050246 (25.1%)" "Fructose-bisphosphate aldolase, class-II (25.1%) Aldolase-type TIM barrel (25.1%) Class II Fructose-bisphosphate Aldolase (25.1%)" RVGGSTYQVPVEVRPVR root "GO:0006412 (19.9%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0015935 (19.8%) GO:0005840 (0.3%) GO:0022627 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.9%) GO:0000049 (19.7%)" "translation (19.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "small ribosomal subunit (19.8%) ribosome (0.3%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%) tRNA binding (19.7%)" "IPR005717 (20.1%) IPR023798 (20.1%) IPR036823 (20.1%)" "Small ribosomal subunit protein uS7, bacteria/organella (20.1%) Small ribosomal subunit protein uS7 domain (20.1%) Small ribosomal subunit protein uS7 domain superfamily (20.1%)" EGAPVPVSVGYATR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0007154 (50%) GO:0016020 (50%) cell communication (50%) membrane (50%) "IPR003644 (33.3%) IPR038081 (33.3%) IPR011047 (20%)" "Na-Ca exchanger/integrin-beta4 (33.3%) CalX-like domain superfamily (33.3%) Quinoprotein alcohol dehydrogenase-like superfamily (20%)" RIQNAGTEVVEAK root "1.1.1.37 (99.7%) 1.3.1.83 (0.2%) 1.-.-.- (0%)" "malate dehydrogenase (99.7%) geranylgeranyl diphosphate reductase (0.2%) Oxidoreductases (0%)" "GO:0006099 (25.1%) GO:0006108 (22.7%) GO:0019752 (1.3%)" "GO:0005737 (19.7%) GO:0005739 (5.4%) GO:0009507 (0.1%)" "GO:0030060 (25.2%) GO:0016491 (0.1%) GO:0045550 (0.1%)" "tricarboxylic acid cycle (25.1%) malate metabolic process (22.7%) carboxylic acid metabolic process (1.3%)" "cytoplasm (19.7%) mitochondrion (5.4%) chloroplast (0.1%)" "L-malate dehydrogenase (NAD+) activity (25.2%) oxidoreductase activity (0.1%) geranylgeranyl reductase activity (0.1%)" "IPR022383 (14.3%) IPR015955 (14.2%) IPR001236 (13.9%)" "Lactate/malate dehydrogenase, C-terminal (14.3%) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (14.2%) Lactate/malate dehydrogenase, N-terminal (13.9%)" DTLICGCYGVNPWLLSGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.18 (66.7%) 1.1.1.361 (33.3%)" "inositol 2-dehydrogenase (66.7%) glucose-6-phosphate 3-dehydrogenase (33.3%)" "GO:0000166 (71%) GO:0050112 (19.4%) GO:0103074 (9.7%)" "nucleotide binding (71%) inositol 2-dehydrogenase (NAD+) activity (19.4%) glucose-6-phosphate 3-dehydrogenase activity (9.7%)" "IPR000683 (18.3%) IPR036291 (18.3%) IPR043906 (18.3%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (18.3%) NAD(P)-binding domain superfamily (18.3%) Gfo/Idh/MocA-like oxidoreductase, bacterial type, C-terminal (18.3%)" EIYLIGDFNDWKEHGDYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) "GO:0005737 (20%) GO:0016020 (1%)" "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (19%)" glycogen biosynthetic process (20%) "cytoplasm (20%) membrane (1%)" "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (19%)" "IPR004193 (12.7%) IPR006047 (12.7%) IPR013783 (12.7%)" "Glycoside hydrolase, family 13, N-terminal (12.7%) Glycosyl hydrolase family 13, catalytic domain (12.7%) Immunoglobulin-like fold (12.7%)" ARELQNFSQEVINVICHFR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.3.3 (100%) N-acetylneuraminate lyase (100%) GO:0005737 (50%) "GO:0016829 (43.1%) GO:0008747 (6.9%)" cytoplasm (50%) "lyase activity (43.1%) N-acetylneuraminate lyase activity (6.9%)" "IPR002220 (50%) IPR013785 (50%)" "DapA-like (50%) Aldolase-type TIM barrel (50%)" NIEVASVFAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0005506 (50%) GO:0016491 (50%)" "iron ion binding (50%) oxidoreductase activity (50%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" LIPITSQNR root "GO:0006865 (33.2%) GO:0015813 (0%) GO:0070778 (0%)" "GO:0005576 (33.2%) GO:0030288 (33.2%) GO:0042597 (0.1%)" "GO:0016595 (0%) GO:0070335 (0%)" "amino acid transport (33.2%) L-glutamate transmembrane transport (0%) L-aspartate transmembrane transport (0%)" "extracellular region (33.2%) outer membrane-bounded periplasmic space (33.2%) periplasmic space (0.1%)" "glutamate binding (0%) aspartate binding (0%)" "IPR001638 (50%) IPR051455 (50%)" "Solute-binding protein family 3/N-terminal domain of MltF (50%) Bacterial solute-binding protein 3 (50%)" AIKDVFGEHAYQLNISSTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" RLGVYTIEDYEAGNCQKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.7%) IPR012910 (12.7%) IPR023996 (12.7%)" "TonB-dependent receptor-like, beta-barrel (12.7%) TonB-dependent receptor, plug domain (12.7%) TonB-dependent outer membrane protein, SusC/RagA (12.7%)" TEHQTEEGEALRHDDK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.3.5.1 (93.3%) 1.3.5.4 (6.7%)" "succinate dehydrogenase (93.3%) Transferred entry: 1.3.5.1 (6.7%)" GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (16.9%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (16.9%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" YEEITASCSCGNVMK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006412 (16.4%) GO:0002181 (0.2%) GO:0006413 (0.2%)" "GO:0005840 (17.5%) GO:1990904 (16.2%) GO:0005737 (0.2%)" "GO:0003735 (16.4%) GO:0019843 (16.2%) GO:0046872 (16%)" "translation (16.4%) cytoplasmic translation (0.2%) translational initiation (0.2%)" "ribosome (17.5%) ribonucleoprotein complex (16.2%) cytoplasm (0.2%)" "structural constituent of ribosome (16.4%) rRNA binding (16.2%) metal ion binding (16%)" "IPR002150 (25.1%) IPR034704 (25.1%) IPR042105 (25.1%)" "Large ribosomal subunit protein bL31 type A/B (25.1%) Large ribosomal subunit protein bL28/bL31-like superfamily (25.1%) Large ribosomal subunit protein bL31 superfamily (25.1%)" TGLDGTELVTVDPSTYQQTVLVPNLPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.14.12 (100%) Xaa-Xaa-Pro tripeptidyl-peptidase (100%) GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001375 (33.3%) IPR011042 (33.3%) IPR029058 (33.3%)" "Peptidase S9, prolyl oligopeptidase, catalytic domain (33.3%) Six-bladed beta-propeller, TolB-like (33.3%) Alpha/Beta hydrolase fold (33.3%)" LATNDNLAEGSAFNKLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" FEADKAEREGNYGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0034605 (19.6%) GO:0042026 (19.6%) GO:0006508 (1.1%)" GO:0005737 (19.6%) "GO:0005524 (19.6%) GO:0016887 (19.6%) GO:0008233 (1.1%)" "cellular response to heat (19.6%) protein refolding (19.6%) proteolysis (1.1%)" cytoplasm (19.6%) "ATP binding (19.6%) ATP hydrolysis activity (19.6%) peptidase activity (1.1%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" KIVDRKEPVIWDILEHVMK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) GO:0000428 (17.1%) "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (15.5%)" DNA-templated transcription (17%) DNA-directed RNA polymerase complex (17.1%) "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (15.5%)" "IPR000722 (9.2%) IPR006592 (9.2%) IPR045867 (9.2%)" "RNA polymerase, alpha subunit (9.2%) RNA polymerase, N-terminal (9.2%) DNA-directed RNA polymerase, subunit beta-prime (9.2%)" TSDVSVVDLTVVLEKEASMADICAAMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (8.3%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (8.3%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" MINSEVFIIKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.17.4.2 (100%) ribonucleoside-triphosphate reductase (thioredoxin) (100%) "GO:0006260 (16.5%) GO:0009265 (16.5%)" GO:0031250 (16.5%) "GO:0005524 (17.5%) GO:0004748 (16.5%) GO:0008998 (16.5%)" "DNA replication (16.5%) 2'-deoxyribonucleotide biosynthetic process (16.5%)" anaerobic ribonucleoside-triphosphate reductase complex (16.5%) "ATP binding (17.5%) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.5%) ribonucleoside-triphosphate reductase (thioredoxin) activity (16.5%)" "IPR005144 (47.5%) IPR012833 (45%) IPR008490 (2.5%)" "ATP-cone domain (47.5%) Ribonucleoside-triphosphate reductase, anaerobic (45%) Transposase InsH, N-terminal (2.5%)" FASYELVPSDVQDKLIKDFESK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0032790 (25.4%) "GO:0003746 (25.4%) GO:0005525 (25.4%) GO:0003924 (23.9%)" ribosome disassembly (25.4%) "translation elongation factor activity (25.4%) GTP binding (25.4%) GTPase activity (23.9%)" "IPR000640 (7.2%) IPR005517 (7.2%) IPR009000 (7.2%)" "Elongation factor EFG, domain V-like (7.2%) Translation elongation factor EFG/EF2, domain IV (7.2%) Translation protein, beta-barrel domain superfamily (7.2%)" LVCDMSSDIFSRPIDISKYDIIYAGAQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" SRENPIAPVEVGCSTNTLCCLQNIAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (78.6%) GO:0050112 (21.4%)" "nucleotide binding (78.6%) inositol 2-dehydrogenase (NAD+) activity (21.4%)" "IPR000683 (24.4%) IPR006311 (24.4%) IPR036291 (24.4%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (24.4%) Twin-arginine translocation pathway, signal sequence (24.4%) NAD(P)-binding domain superfamily (24.4%)" NNIILGNNETGER Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus GO:0006412 (19.7%) "GO:0005840 (21.3%) GO:0005737 (19.7%) GO:1990904 (19.7%)" GO:0003735 (19.7%) translation (19.7%) "ribosome (21.3%) cytoplasm (19.7%) ribonucleoprotein complex (19.7%)" structural constituent of ribosome (19.7%) "IPR001705 (25%) IPR011332 (25%) IPR018264 (25%)" "Large ribosomal subunit protein bL33 (25%) Zinc-binding ribosomal protein (25%) Large ribosomal subunit protein bL33, conserved site (25%)" SAAGNYVFNER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.-.-.- (50%) 1.5.1.34 (50%)" "Oxidoreductases (50%) 6,7-dihydropteridine reductase (50%)" GO:0046256 (27.9%) "GO:0005829 (27.9%) GO:0016020 (0.3%)" "GO:0046857 (27.5%) GO:0004155 (12.8%) GO:0016491 (2.3%)" 2,4,6-trinitrotoluene catabolic process (27.9%) "cytosol (27.9%) membrane (0.3%)" "oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor (27.5%) 6,7-dihydropteridine reductase activity (12.8%) oxidoreductase activity (2.3%)" "IPR000415 (25.8%) IPR029479 (25.8%) IPR033878 (24.4%)" "Nitroreductase-like (25.8%) Nitroreductase (25.8%) Oxygen-insensitive NAD(P)H nitroreductase NfsB-like (24.4%)" RVSMGLLGAEVSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.21.- (100%) Serine endopeptidases (100%) GO:0006508 (32.8%) GO:0005737 (32.8%) "GO:0008236 (32.8%) GO:0003743 (1.7%)" proteolysis (32.8%) cytoplasm (32.8%) "serine-type peptidase activity (32.8%) translation initiation factor activity (1.7%)" "IPR005151 (12.5%) IPR011659 (12.5%) IPR012393 (12.5%)" "Tail specific protease (12.5%) WD40-like beta-propeller (12.5%) Tricorn protease (12.5%)" LADVAPTILHILDMVQPAEMTGCNLIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" IEGVEHEFSSVPGVKEDVTNIILNLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.7%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.7%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011260 (16.7%) IPR011262 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.7%) DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" ILYPEDSTPQGK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005980 (25%) GO:0005737 (25%) "GO:0008184 (25%) GO:0030170 (25%)" glycogen catabolic process (25%) cytoplasm (25%) "glycogen phosphorylase activity (25%) pyridoxal phosphate binding (25%)" "IPR000811 (34.9%) IPR011833 (33%) IPR035090 (32.2%)" "Glycosyl transferase, family 35 (34.9%) Glycogen/starch/alpha-glucan phosphorylase (33%) Phosphorylase pyridoxal-phosphate attachment site (32.2%)" GELLESGPSAIVDITNEQQIAETVSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" VLIVDDVPTNVMLVQAILKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.13.3 (100%) histidine kinase (100%) GO:0000155 (100%) phosphorelay sensor kinase activity (100%) "IPR001789 (14.3%) IPR003594 (14.3%) IPR003661 (14.3%)" "Signal transduction response regulator, receiver domain (14.3%) Histidine kinase/HSP90-like ATPase domain (14.3%) Signal transduction histidine kinase, dimerisation/phosphoacceptor domain (14.3%)" AYGSTIEEAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.14.4 (100%) dipeptidyl-peptidase III (100%) "GO:0046872 (50%) GO:0016787 (47.4%) GO:0008239 (2.6%)" "metal ion binding (50%) hydrolase activity (47.4%) dipeptidyl-peptidase activity (2.6%)" IPR039461 (100%) Peptidase family M49 (100%) GIADVPTVNPYIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.6.5.- (61.5%) 3.6.-.- (30.8%) 2.7.-.- (7.7%)" "Acting on GTP; involved in cellular and subcellular movement (61.5%) Acting on acid anhydrides (30.8%) Transferring phosphorus-containing groups (7.7%)" GO:0005737 (31.7%) "GO:0003924 (31.7%) GO:0005525 (31.7%) GO:0016301 (2.4%)" cytoplasm (31.7%) "GTPase activity (31.7%) GTP binding (31.7%) kinase activity (2.4%)" "IPR005129 (50%) IPR027417 (50%)" "SIMIBI class G3E GTPase, ArgK/MeaB (50%) P-loop containing nucleoside triphosphate hydrolase (50%)" MHDYTENEIPVNHLFQQYAILK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.5.1.4 (100%) inositol-3-phosphate synthase (100%) "GO:0006021 (33.3%) GO:0008654 (33.3%)" GO:0004512 (33.3%) "inositol biosynthetic process (33.3%) phospholipid biosynthetic process (33.3%)" inositol-3-phosphate synthase activity (33.3%) "IPR002587 (33.3%) IPR013021 (33.3%) IPR036291 (33.3%)" "Myo-inositol-1-phosphate synthase (33.3%) Myo-inositol-1-phosphate synthase, GAPDH-like (33.3%) NAD(P)-binding domain superfamily (33.3%)" GVLDYLHYYR root 3.4.13.9 (100%) Xaa-Pro dipeptidase (100%) "GO:0006508 (14.5%) GO:0043171 (0%)" GO:0005829 (14.3%) "GO:0046872 (14.3%) GO:0004177 (14.3%) GO:0016795 (13.7%)" "proteolysis (14.5%) peptide catabolic process (0%)" cytosol (14.3%) "metal ion binding (14.3%) aminopeptidase activity (14.3%) phosphoric triester hydrolase activity (13.7%)" "IPR036005 (14.4%) IPR000994 (14.3%) IPR048819 (14.3%)" "Creatinase/aminopeptidase-like (14.4%) Peptidase M24 (14.3%) Xaa-Pro dipeptidase, N-terminal domain (14.3%)" LITITVCTSRPGIIIGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20.1%) GO:0022627 (20.1%) "GO:0003735 (20.1%) GO:0019843 (20.1%) GO:0003729 (19.5%)" translation (20.1%) cytosolic small ribosomal subunit (20.1%) "structural constituent of ribosome (20.1%) rRNA binding (20.1%) mRNA binding (19.5%)" "IPR001351 (11.2%) IPR004044 (11.2%) IPR004087 (11.2%)" "Small ribosomal subunit protein uS3, C-terminal (11.2%) K Homology domain, type 2 (11.2%) K Homology domain (11.2%)" MNVLELSEQEIIRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.6%) GO:0005829 (16.6%) "GO:0000049 (16.6%) GO:0004824 (16.6%) GO:0005524 (16.6%)" lysyl-tRNA aminoacylation (16.6%) cytosol (16.6%) "tRNA binding (16.6%) lysine-tRNA ligase activity (16.6%) ATP binding (16.6%)" "IPR004364 (12.2%) IPR004365 (12.2%) IPR006195 (12.2%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (12.2%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (12.2%) Aminoacyl-tRNA synthetase, class II (12.2%)" TADEVRAEGTPEEIVPAR Actinomycetota Bacteria Bacillati Actinomycetota 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.2%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.2%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.2%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.2%)" "IPR001672 (16.7%) IPR018189 (16.7%) IPR035476 (16.7%)" "Phosphoglucose isomerase (PGI) (16.7%) Phosphoglucose isomerase, conserved site (16.7%) Phosphoglucose isomerase, SIS domain 1 (16.7%)" TLHIEDPDEAAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0016746 (77.4%) GO:0008959 (22.6%)" "acyltransferase activity (77.4%) phosphate acetyltransferase activity (22.6%)" "IPR002505 (33.7%) IPR050500 (33.7%) IPR012147 (32.6%)" "Phosphate acetyl/butaryl transferase (33.7%) Phosphate Acetyltransferase/Butyryltransferase (33.7%) Phosphate acetyl/butyryltransferase (32.6%)" VINNADDLAMYLLEVAHVACVGGTSFGAPECIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" EAGGIVSDFTGGHNYMLTGNIVAGNPR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.1.3.25 (100%) inositol-phosphate phosphatase (100%) "GO:0006020 (11.3%) GO:0007165 (11.3%) GO:0046854 (11.3%)" "GO:0005737 (10.6%) GO:0005829 (0.1%)" "GO:0008934 (11.3%) GO:0046872 (11.2%) GO:0003723 (10.5%)" "inositol metabolic process (11.3%) signal transduction (11.3%) phosphatidylinositol phosphate biosynthetic process (11.3%)" "cytoplasm (10.6%) cytosol (0.1%)" "inositol monophosphate 1-phosphatase activity (11.3%) metal ion binding (11.2%) RNA binding (10.5%)" "IPR000760 (20.9%) IPR020550 (20.4%) IPR022337 (20%)" "Inositol monophosphatase-like (20.9%) Inositol monophosphatase, conserved site (20.4%) Inositol monophosphatase SuhB-like (20%)" YNMTPLQAMKHDYDFLMNASYVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR006311 (20%) IPR013022 (20%) IPR019546 (20%)" "Twin-arginine translocation pathway, signal sequence (20%) Xylose isomerase-like, TIM barrel domain (20%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (20%)" NVAFALATIAGTISK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.2.1 (100%) argininosuccinate lyase (100%) "GO:0042450 (32.9%) GO:0006526 (1.3%)" GO:0005829 (32.9%) GO:0004056 (32.9%) "L-arginine biosynthetic process via ornithine (32.9%) L-arginine biosynthetic process (1.3%)" cytosol (32.9%) argininosuccinate lyase activity (32.9%) "IPR000362 (16.7%) IPR008948 (16.7%) IPR009049 (16.7%)" "Fumarate lyase family (16.7%) L-Aspartase-like (16.7%) Argininosuccinate lyase (16.7%)" DALLENVTVDANGKIDFADKSTTENTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (16.7%) GO:0005829 (16.7%) "GO:0004612 (16.7%) GO:0005524 (16.7%) GO:0016301 (16.7%)" gluconeogenesis (16.7%) cytosol (16.7%) "phosphoenolpyruvate carboxykinase (ATP) activity (16.7%) ATP binding (16.7%) kinase activity (16.7%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" VYLNPQDCSVINDEALNR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "5.1.3.15 (99.4%) 5.1.3.- (0.6%)" "glucose-6-phosphate 1-epimerase (99.4%) Acting on carbohydrates and derivatives (0.6%)" "GO:0005975 (25%) GO:0006974 (0.1%)" "GO:0005737 (24.6%) GO:0005829 (0.1%)" "GO:0030246 (25%) GO:0047938 (24.9%) GO:0003824 (0.1%)" "carbohydrate metabolic process (25%) DNA damage response (0.1%)" "cytoplasm (24.6%) cytosol (0.1%)" "carbohydrate binding (25%) glucose-6-phosphate 1-epimerase activity (24.9%) catalytic activity (0.1%)" "IPR011013 (25.5%) IPR014718 (25.5%) IPR008183 (25.1%)" "Galactose mutarotase-like domain superfamily (25.5%) Glycoside hydrolase-type carbohydrate-binding (25.5%) Aldose 1-/Glucose-6-phosphate 1-epimerase (25.1%)" ALVTLGIKPSRPETGYGYIQSSDTVVDDFTKVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.13 (100%) mannose-1-phosphate guanylyltransferase (100%) GO:0009298 (32%) "GO:0004475 (32%) GO:0005525 (32%) GO:0016853 (4%)" GDP-mannose biosynthetic process (32%) "mannose-1-phosphate guanylyltransferase (GTP) activity (32%) GTP binding (32%) isomerase activity (4%)" "IPR005835 (25%) IPR029044 (25%) IPR049577 (25%)" "Nucleotidyl transferase domain (25%) Nucleotide-diphospho-sugar transferases (25%) GDP-mannose pyrophosphorylase, N-terminal domain (25%)" LNKDGLGELTR MNKTQLIDVIAEK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0030261 (11.5%) GO:0006270 (10.6%) GO:0006351 (10.6%)" "GO:0005829 (11.5%) GO:1990103 (10.6%) GO:1990178 (10.6%)" "GO:0003677 (11.9%) GO:0030527 (11.6%) GO:0042802 (10.6%)" "chromosome condensation (11.5%) DNA replication initiation (10.6%) DNA-templated transcription (10.6%)" "cytosol (11.5%) DnaA-HU complex (10.6%) HU-DNA complex (10.6%)" "DNA binding (11.9%) structural constituent of chromatin (11.6%) identical protein binding (10.6%)" "IPR000119 (33.7%) IPR010992 (33.7%) IPR020816 (32.6%)" "Histone-like DNA-binding protein (33.7%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.7%) Histone-like DNA-binding protein, conserved site (32.6%)" AQLLDAVKDADAVIIRSDKVDAEVLDAAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (50%) GO:0016616 (33.3%) GO:0004617 (16.7%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (33.3%) phosphoglycerate dehydrogenase activity (16.7%)" "IPR006139 (25%) IPR006140 (25%) IPR029752 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 (25%)" ASGIQTGGPDSLSQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae IPR003791 (100%) Protein of unknown function UPF0178 (100%) HYYAILESNWNGTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) LIMTFAEAGRPLSAICAAPLVYGKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.-.- (100%) Glycosylases (100%) GO:0006508 (10%) GO:0005737 (75%) "GO:0008233 (10%) GO:0016798 (5%)" proteolysis (10%) cytoplasm (75%) "peptidase activity (10%) hydrolase activity, acting on glycosyl bonds (5%)" "IPR002818 (25%) IPR006287 (25%) IPR029062 (25%)" "DJ-1/PfpI (25%) Protein/nucleic acid deglycase DJ-1 (25%) Class I glutamine amidotransferase-like (25%)" YKTIEWLNYIATELHK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.5.1.18 (100%) glutathione transferase (100%) GO:0042542 (0.4%) GO:0005737 (27%) "GO:0016740 (38.8%) GO:0004364 (33.1%) GO:0016853 (0.4%)" response to hydrogen peroxide (0.4%) cytoplasm (27%) "transferase activity (38.8%) glutathione transferase activity (33.1%) isomerase activity (0.4%)" "IPR036282 (17.9%) IPR004046 (17.9%) IPR010987 (17.9%)" "Glutathione S-transferase, C-terminal domain superfamily (17.9%) Glutathione S-transferase, C-terminal (17.9%) Glutathione S-transferase, C-terminal-like (17.9%)" LSEQELFDLFDHFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20.3%) GO:0009263 (19%)" "GO:0004748 (20.3%) GO:0031419 (20.3%) GO:0005524 (19%)" "DNA biosynthetic process (20.3%) deoxyribonucleotide biosynthetic process (19%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.3%) cobalamin binding (20.3%) ATP binding (19%)" "IPR000788 (25.4%) IPR013344 (25.4%) IPR050862 (25.4%)" "Ribonucleotide reductase large subunit, C-terminal (25.4%) Ribonucleotide reductase, adenosylcobalamin-dependent (25.4%) Ribonucleoside diphosphate reductase class-2 (25.4%)" TADIEQALVMGAHGAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005829 (50%) GO:0004459 (50%) cytosol (50%) L-lactate dehydrogenase (NAD+) activity (50%) "IPR003741 (33.3%) IPR024185 (33.3%) IPR037171 (33.3%)" "LUD domain (33.3%) 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily (33.3%) NagB/RpiA transferase-like (33.3%)" YECMGDVPNVCFPCAALHDPATGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.4.1.- (50%) 2.4.1.319 (50%)" "Hexosyltransferases (50%) beta-1,4-mannooligosaccharide phosphorylase (50%)" "GO:0016757 (69.6%) GO:0016798 (30.4%)" "glycosyltransferase activity (69.6%) hydrolase activity, acting on glycosyl bonds (30.4%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" LAGEQNVMDHCEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.133 (100%) dTDP-4-dehydrorhamnose reductase (100%) GO:0019305 (33.3%) GO:0005829 (33.3%) GO:0008831 (33.3%) dTDP-rhamnose biosynthetic process (33.3%) cytosol (33.3%) dTDP-4-dehydrorhamnose reductase activity (33.3%) "IPR005913 (33.3%) IPR029903 (33.3%) IPR036291 (33.3%)" "dTDP-4-dehydrorhamnose reductase family (33.3%) RmlD-like substrate binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" LANQLGCQLEAIAAGTGLAGIEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) GO:0033539 (32.5%) "GO:0009055 (32.5%) GO:0050660 (32.5%) GO:0016491 (2.5%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (32.5%) "electron transfer activity (32.5%) flavin adenine dinucleotide binding (32.5%) oxidoreductase activity (2.5%)" "IPR001308 (16.7%) IPR014729 (16.7%) IPR014730 (16.7%)" "Electron transfer flavoprotein alpha subunit/FixB (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.7%)" AAIGIPEEELRK Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (25%) GO:0030388 (25%)" "GO:0004332 (25%) GO:0008270 (25%)" "glycolytic process (25%) fructose 1,6-bisphosphate metabolic process (25%)" "fructose-bisphosphate aldolase activity (25%) zinc ion binding (25%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" NMVTGAAQMDGAIIVVAATDGPMPQTR root "3.6.5.3 (99.9%) 2.7.7.6 (0.1%)" "protein-synthesizing GTPase (99.9%) DNA-directed RNA polymerase (0.1%)" "GO:0006351 (0%) GO:0006633 (0%)" "GO:0005829 (15.5%) GO:0032045 (12%) GO:0005737 (0%)" "GO:0003746 (15.7%) GO:0003924 (15.7%) GO:0005525 (15.7%)" "DNA-templated transcription (0%) fatty acid biosynthetic process (0%)" "cytosol (15.5%) guanyl-nucleotide exchange factor complex (12%) cytoplasm (0%)" "translation elongation factor activity (15.7%) GTPase activity (15.7%) GTP binding (15.7%)" "IPR000795 (8.9%) IPR050055 (8.9%) IPR027417 (8.9%)" "Translational (tr)-type GTP-binding domain (8.9%) Elongation factor Tu GTPase (8.9%) P-loop containing nucleoside triphosphate hydrolase (8.9%)" ALAEYLFDDENMMTR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0034605 (18.6%) GO:0042026 (18.4%) GO:0006508 (2.7%)" GO:0005737 (18.6%) "GO:0005524 (18.6%) GO:0016887 (18.6%) GO:0008233 (2.7%)" "cellular response to heat (18.6%) protein refolding (18.4%) proteolysis (2.7%)" cytoplasm (18.6%) "ATP binding (18.6%) ATP hydrolysis activity (18.6%) peptidase activity (2.7%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" SVDAEVIASTFDEPAER Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.4%) GO:0005829 (13.7%) "GO:0003723 (14.4%) GO:0005524 (14.4%) GO:0008186 (14.4%)" DNA-templated transcription termination (14.4%) cytosol (13.7%) "RNA binding (14.4%) ATP binding (14.4%) ATP-dependent activity, acting on RNA (14.4%)" "IPR000194 (10.2%) IPR003593 (10.2%) IPR004665 (10.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.2%) AAA+ ATPase domain (10.2%) Transcription termination factor Rho (10.2%)" QKFIDTYGGGSENAIHTQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.6.2.2 (97.8%) 5.99.1.3 (2.2%)" "DNA topoisomerase (ATP-hydrolyzing) (97.8%) Transferred entry: 5.6.2.2 (2.2%)" "GO:0006265 (12.7%) GO:0006261 (11.8%) GO:0032259 (0.3%)" "GO:0005737 (12.7%) GO:0005694 (11.8%)" "GO:0003677 (12.7%) GO:0005524 (12.7%) GO:0046872 (12.4%)" "DNA topological change (12.7%) DNA-templated DNA replication (11.8%) methylation (0.3%)" "cytoplasm (12.7%) chromosome (11.8%)" "DNA binding (12.7%) ATP binding (12.7%) metal ion binding (12.4%)" "IPR000565 (7.4%) IPR001241 (7.4%) IPR006171 (7.4%)" "DNA topoisomerase, type IIA, subunit B (7.4%) DNA topoisomerase, type IIA (7.4%) TOPRIM domain (7.4%)" STISIIAAIADKSAIGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.5.1.3 (100%) dihydrofolate reductase (100%) "GO:0006730 (14%) GO:0046452 (14%) GO:0046654 (14%)" GO:0005829 (14%) "GO:0004146 (14%) GO:0050661 (14%) GO:0016301 (1.8%)" "one-carbon metabolic process (14%) dihydrofolate metabolic process (14%) tetrahydrofolate biosynthetic process (14%)" cytosol (14%) "dihydrofolate reductase activity (14%) NADP binding (14%) kinase activity (1.8%)" "IPR001796 (33.3%) IPR012259 (33.3%) IPR024072 (33.3%)" "Dihydrofolate reductase domain (33.3%) Dihydrofolate reductase (33.3%) Dihydrofolate reductase-like domain superfamily (33.3%)" DVSLAQSMISLGSCTMK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" AVTDKPSLLMCK root 2.2.1.1 (100%) transketolase (100%) "GO:0009052 (22.8%) GO:0006098 (2.4%) GO:0006310 (0%)" "GO:0005829 (25.1%) GO:0016020 (0%)" "GO:0004802 (25.1%) GO:0046872 (24.3%) GO:0016740 (0.2%)" "pentose-phosphate shunt, non-oxidative branch (22.8%) pentose-phosphate shunt (2.4%) DNA recombination (0%)" "cytosol (25.1%) membrane (0%)" "transketolase activity (25.1%) metal ion binding (24.3%) transferase activity (0.2%)" "IPR005474 (11.7%) IPR033247 (11.7%) IPR029061 (11.7%)" "Transketolase, N-terminal (11.7%) Transketolase family (11.7%) Thiamin diphosphate-binding fold (11.7%)" VTEPYLVDALSFTEAEAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR027848 (100%) Protein of unknown function DUF4494 (100%) KLLFLGSTCIYPR root 1.1.1.271 (100%) GDP-L-fucose synthase (100%) GO:0042351 (23.6%) GO:0016020 (4.9%) "GO:0050577 (24.1%) GO:0016853 (23.8%) GO:0070401 (23.6%)" 'de novo' GDP-L-fucose biosynthetic process (23.6%) membrane (4.9%) "GDP-L-fucose synthase activity (24.1%) isomerase activity (23.8%) NADP+ binding (23.6%)" "IPR001509 (33.5%) IPR036291 (33.4%) IPR028614 (33.1%)" "NAD-dependent epimerase/dehydratase (33.5%) NAD(P)-binding domain superfamily (33.4%) GDP-L-fucose synthase/GDP-L-colitose synthase (33.1%)" FTAEGVQEIDYKDIATLK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (24.8%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (24.4%) GO:0005840 (0.9%) GO:1990904 (0.5%)" "GO:0003735 (24.8%) GO:0070181 (24.4%) GO:0048027 (0%)" "translation (24.8%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.4%) ribosome (0.9%) ribonucleoprotein complex (0.5%)" "structural constituent of ribosome (24.8%) small ribosomal subunit rRNA binding (24.4%) mRNA 5'-UTR binding (0%)" "IPR001648 (33.4%) IPR036870 (33.4%) IPR018275 (33.1%)" "Small ribosomal subunit protein bS18 (33.4%) Small ribosomal subunit protein bS18 superfamily (33.4%) Small ribosomal subunit protein bS18, conserved site (33.1%)" ANITVNKNSVPNDPKSPFVTSGIR root 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.2%) GO:0035999 (14.6%) GO:0032259 (11.2%)" "GO:0005829 (15.2%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0004372 (15.2%) GO:0030170 (15.2%) GO:0008168 (11.2%)" "glycine biosynthetic process from serine (15.2%) tetrahydrofolate interconversion (14.6%) methylation (11.2%)" "cytosol (15.2%) cytoplasm (0%) membrane (0%)" "glycine hydroxymethyltransferase activity (15.2%) pyridoxal phosphate binding (15.2%) methyltransferase activity (11.2%)" "IPR015422 (14.5%) IPR015424 (14.5%) IPR039429 (14.5%)" "Pyridoxal phosphate-dependent transferase, small domain (14.5%) Pyridoxal phosphate-dependent transferase (14.5%) Serine hydroxymethyltransferase-like domain (14.5%)" KTVVADGVGQGYKEVQEISPNLR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria IPR020911 (100%) Uncharacterised protein family UPF0325 (100%) AAAADTLSDVRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (25%) GO:0005829 (25%) "GO:0004830 (25%) GO:0005524 (25%)" tryptophanyl-tRNA aminoacylation (25%) cytosol (25%) "tryptophan-tRNA ligase activity (25%) ATP binding (25%)" "IPR001412 (20%) IPR002305 (20%) IPR002306 (20%)" "Aminoacyl-tRNA synthetase, class I, conserved site (20%) Aminoacyl-tRNA synthetase, class Ic (20%) Tryptophan-tRNA ligase (20%)" LKGYTISQDELVNAGTLR Parabacteroides merdae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides merdae "GO:0005975 (20.5%) GO:0006516 (20.5%)" GO:0005829 (20.5%) "GO:0000224 (20.5%) GO:0030246 (18.2%)" "carbohydrate metabolic process (20.5%) glycoprotein catabolic process (20.5%)" cytosol (20.5%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (20.5%) carbohydrate binding (18.2%)" "IPR005887 (17.3%) IPR008928 (17.3%) IPR012939 (17.3%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (17.3%) Six-hairpin glycosidase superfamily (17.3%) Glycosyl hydrolase family 92 (17.3%)" AIIYADKTEAFANVAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.1.23 (100%) orotidine-5'-phosphate decarboxylase (100%) "GO:0006207 (33.3%) GO:0044205 (33.3%)" GO:0004590 (33.3%) "'de novo' pyrimidine nucleobase biosynthetic process (33.3%) 'de novo' UMP biosynthetic process (33.3%)" orotidine-5'-phosphate decarboxylase activity (33.3%) "IPR001754 (25%) IPR011060 (25%) IPR011995 (25%)" "Orotidine 5'-phosphate decarboxylase domain (25%) Ribulose-phosphate binding barrel (25%) Orotidine 5'-phosphate decarboxylase, type 2 (25%)" RGLTNICHVPEAILK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (48.8%) GO:0004356 (51.2%) glutamine biosynthetic process (48.8%) glutamine synthetase activity (51.2%) "IPR008146 (14.6%) IPR014746 (14.6%) IPR040577 (14.6%)" "Glutamine synthetase, catalytic domain (14.6%) Glutamine synthetase/guanido kinase, catalytic domain (14.6%) Glutamine synthetase, C-terminal (14.6%)" GCANTSIFDAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0016620 (9.5%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (9.5%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" MKAVGGVDLFLGGIGPDGHIAFNEPGSSLSSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (13.1%) GO:0005737 (1.2%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (13.1%) cytoplasm (1.2%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" YFCIDFLHVKPGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043043 (32.8%) "GO:0005829 (32.4%) GO:0005737 (0.8%)" GO:0003746 (34%) peptide biosynthetic process (32.8%) "cytosol (32.4%) cytoplasm (0.8%)" translation elongation factor activity (34%) "IPR008991 (11.2%) IPR013185 (11.2%) IPR014722 (11.2%)" "Translation protein SH3-like domain superfamily (11.2%) Translation elongation factor, KOW-like (11.2%) Large ribosomal subunit protein uL2, domain 2 (11.2%)" EKANEVASMQIIGDVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (10.9%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (10.9%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20.1%) IPR005946 (20.1%) IPR029057 (20.1%)" "Phosphoribosyltransferase domain (20.1%) Ribose-phosphate pyrophosphokinase (20.1%) Phosphoribosyltransferase-like (20.1%)" VNPIDFENAEGNLGIANAILEHLATKLPVSR Bacteroidota Bacteria Pseudomonadati Bacteroidota 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (21.4%) GO:0044208 (21.4%) GO:0006188 (11.9%)" "GO:0004018 (33.3%) GO:0070626 (11.9%)" "'de novo' IMP biosynthetic process (21.4%) 'de novo' AMP biosynthetic process (21.4%) IMP biosynthetic process (11.9%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (33.3%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (11.9%)" "IPR000362 (12.5%) IPR004769 (12.5%) IPR008948 (12.5%)" "Fumarate lyase family (12.5%) Adenylosuccinate lyase (12.5%) L-Aspartase-like (12.5%)" VINTPKPMSTDIQLYGVDVPEVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (50%) GO:0003824 (19.4%) GO:0043758 (19.4%)" "ATP binding (50%) catalytic activity (19.4%) acetate-CoA ligase (ADP-forming) activity (19.4%)" "IPR013815 (20%) IPR003781 (17.8%) IPR016102 (17.8%)" "ATP-grasp fold, subdomain 1 (20%) CoA-binding (17.8%) Succinyl-CoA synthetase-like (17.8%)" TCVLHPASHTHR Bacteria Bacteria "2.5.1.49 (62.3%) 4.4.1.11 (28.3%) 2.5.1.47 (5.7%)" "O-acetylhomoserine aminocarboxypropyltransferase (62.3%) methionine gamma-lyase (28.3%) cysteine synthase (5.7%)" "GO:0006535 (13.9%) GO:0019346 (13.9%) GO:0071269 (13.9%)" GO:0005737 (13.9%) "GO:0003961 (13.9%) GO:0004124 (13.9%) GO:0030170 (13.9%)" "cysteine biosynthetic process from serine (13.9%) transsulfuration (13.9%) L-homocysteine biosynthetic process (13.9%)" cytoplasm (13.9%) "O-acetylhomoserine aminocarboxypropyltransferase activity (13.9%) cysteine synthase activity (13.9%) pyridoxal phosphate binding (13.9%)" "IPR000277 (20%) IPR006235 (20%) IPR015422 (20%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (20%) O-acetylhomoserine/O-acetylserine sulfhydrylase (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" GKLPVNSNVEIVGIRPTQTTTVTSIETFHK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (19.9%) "GO:0003746 (19.9%) GO:0003924 (19.9%) GO:0005525 (19.9%)" cytosol (19.9%) "translation elongation factor activity (19.9%) GTPase activity (19.9%) GTP binding (19.9%)" "IPR000795 (10%) IPR004161 (10%) IPR009000 (10%)" "Translational (tr)-type GTP-binding domain (10%) Translation elongation factor EFTu-like, domain 2 (10%) Translation protein, beta-barrel domain superfamily (10%)" SAFDIDWIGIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (13.8%) GO:0006526 (13.8%) GO:0006541 (13.8%)" GO:0005737 (13.8%) "GO:0004088 (13.8%) GO:0005524 (13.8%) GO:0046872 (13.8%)" "pyrimidine nucleotide biosynthetic process (13.8%) L-arginine biosynthetic process (13.8%) glutamine metabolic process (13.8%)" cytoplasm (13.8%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.8%) ATP binding (13.8%) metal ion binding (13.8%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" TLGTAACPPYHLAFVIGGTSAETNLK root "4.2.1.2 (98.7%) 5.3.2.2 (1%) 4.2.1.81 (0.3%)" "fumarate hydratase (98.7%) oxaloacetate tautomerase (1%) D(-)-tartrate dehydratase (0.3%)" "GO:0006099 (18.8%) GO:0006091 (0.2%) GO:0006106 (0.1%)" GO:0005829 (0.1%) "GO:0046872 (20.6%) GO:0051539 (20.6%) GO:0004333 (19.7%)" "tricarboxylic acid cycle (18.8%) generation of precursor metabolites and energy (0.2%) fumarate metabolic process (0.1%)" cytosol (0.1%) "metal ion binding (20.6%) 4 iron, 4 sulfur cluster binding (20.6%) fumarate hydratase activity (19.7%)" "IPR004646 (17.9%) IPR051208 (17.9%) IPR004647 (16.5%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (17.9%) Class-I Fumarase/Tartrate Dehydratase (17.9%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.5%)" VKVGDTVIEFDLPLLEEKAK root 2.7.1.199 (100%) protein-N(pi)-phosphohistidine--D-glucose phosphotransferase (100%) "GO:0009401 (32.1%) GO:0034763 (0.3%) GO:0043610 (0.3%)" "GO:0005737 (31.5%) GO:0005829 (0.3%) GO:0016020 (0.3%)" "GO:0016301 (31.8%) GO:0016740 (0.9%) GO:0046872 (0.9%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (32.1%) negative regulation of transmembrane transport (0.3%) regulation of carbohydrate utilization (0.3%)" "cytoplasm (31.5%) cytosol (0.3%) membrane (0.3%)" "kinase activity (31.8%) transferase activity (0.9%) metal ion binding (0.9%)" "IPR001127 (32.9%) IPR011055 (32.9%) IPR050890 (32.6%)" "Phosphotransferase system, sugar-specific permease EIIA type 1 (32.9%) Duplicated hybrid motif (32.9%) Phosphotransferase system EIIA component (32.6%)" IEEMHIPMKDMWWYLDTRK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.3%) GO:0005737 (19.6%) "GO:0005524 (20.3%) GO:0004816 (19.9%) GO:0003676 (19.6%)" asparaginyl-tRNA aminoacylation (20.3%) cytoplasm (19.6%) "ATP binding (20.3%) asparagine-tRNA ligase activity (19.9%) nucleic acid binding (19.6%)" "IPR004364 (14.5%) IPR045864 (14.5%) IPR002312 (14.3%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (14.5%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.5%) Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.3%)" TDEETGQTVISGMGELHLDIIIDR Sphingobacteriaceae Bacteria Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004540 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFG/EF2 (6.3%)" FGMQFVELMDILK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.12 (100%) aspartate--tRNA ligase (100%) GO:0006422 (19.8%) GO:0005737 (19.8%) "GO:0003676 (19.8%) GO:0004815 (19.8%) GO:0005524 (19.8%)" aspartyl-tRNA aminoacylation (19.8%) cytoplasm (19.8%) "nucleic acid binding (19.8%) aspartate-tRNA ligase activity (19.8%) ATP binding (19.8%)" "IPR002312 (9.1%) IPR004115 (9.1%) IPR004364 (9.1%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.1%) GAD-like domain superfamily (9.1%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.1%)" AGFENIDRK Bacteria Bacteria GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000244 (12.9%) IPR009027 (12.9%) IPR020069 (12.9%)" "Large ribosomal subunit protein bL9 (12.9%) Large ribosomal subunit protein bL9/RNase H1, N-terminal (12.9%) Large ribosomal subunit protein bL9, C-terminal (12.9%)" YLVGIVTNR Bacteria Bacteria 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (20.1%) GO:0006177 (20%) GO:0009306 (0.1%)" GO:0005886 (0.1%) "GO:0003938 (20.1%) GO:0046872 (20%) GO:0000166 (19.4%)" "GTP biosynthetic process (20.1%) GMP biosynthetic process (20%) protein secretion (0.1%)" plasma membrane (0.1%) "IMP dehydrogenase activity (20.1%) metal ion binding (20%) nucleotide binding (19.4%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" NSGNDIVAPYADEFPGSTFYPGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006537 (26.3%) GO:0005829 (23.7%) "GO:0004354 (26.3%) GO:0000166 (23.7%)" glutamate biosynthetic process (26.3%) cytosol (23.7%) "glutamate dehydrogenase (NADP+) activity (26.3%) nucleotide binding (23.7%)" "IPR006095 (12.5%) IPR006096 (12.5%) IPR006097 (12.5%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.5%)" FVAENELGNGLCK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (24.8%) GO:0005737 (24.8%) "GO:0004148 (24.8%) GO:0050660 (24.8%) GO:0016491 (0.7%)" 2-oxoglutarate metabolic process (24.8%) cytoplasm (24.8%) "dihydrolipoyl dehydrogenase (NADH) activity (24.8%) flavin adenine dinucleotide binding (24.8%) oxidoreductase activity (0.7%)" "IPR001100 (12.5%) IPR004099 (12.5%) IPR006258 (12.5%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (12.5%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.5%) Dihydrolipoamide dehydrogenase (12.5%)" NCDVIIGTPFTHLASVAAAIDTNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" AVIEALSNSFQWLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.2%) GO:0006096 (14.2%) GO:0051156 (14.2%)" GO:0005829 (14.2%) "GO:0004347 (14.2%) GO:0048029 (14.2%) GO:0097367 (14.2%)" "gluconeogenesis (14.2%) glycolytic process (14.2%) glucose 6-phosphate metabolic process (14.2%)" cytosol (14.2%) "glucose-6-phosphate isomerase activity (14.2%) monosaccharide binding (14.2%) carbohydrate derivative binding (14.2%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" LLAWLETLKAELGIPK root "1.1.1.1 (65.6%) 1.2.1.10 (34.4%)" "alcohol dehydrogenase (65.6%) acetaldehyde dehydrogenase (acetylating) (34.4%)" "GO:0015976 (17.8%) GO:0006066 (17.7%) GO:0006115 (0.2%)" "GO:0005829 (0.3%) GO:0016020 (0.2%)" "GO:0046872 (20.3%) GO:0008774 (18.7%) GO:0004022 (16.9%)" "carbon utilization (17.8%) alcohol metabolic process (17.7%) ethanol biosynthetic process (0.2%)" "cytosol (0.3%) membrane (0.2%)" "metal ion binding (20.3%) acetaldehyde dehydrogenase (acetylating) activity (18.7%) alcohol dehydrogenase (NAD+) activity (16.9%)" "IPR039697 (10.7%) IPR056798 (10.6%) IPR001670 (10.4%)" "Iron-type alcohol dehydrogenase-like (10.7%) Fe-containing alcohol dehydrogenase-like, C-terminal (10.6%) Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (10.4%)" GRSEEFAFLELLEER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (25%) "GO:0036440 (13.9%) GO:0046912 (11.1%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (25%) "citrate synthase activity (13.9%) acyltransferase activity, acyl groups converted into alkyl on transfer (11.1%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" SKDDVLQLDEFQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0044205 (16.7%) "GO:0009055 (16.7%) GO:0016491 (16.7%) GO:0046872 (16.7%)" 'de novo' UMP biosynthetic process (16.7%) "electron transfer activity (16.7%) oxidoreductase activity (16.7%) metal ion binding (16.7%)" "IPR001433 (11.1%) IPR012165 (11.1%) IPR017927 (11.1%)" "Oxidoreductase FAD/NAD(P)-binding (11.1%) Cytochrome-c3 hydrogenase, gamma subunit (11.1%) FAD-binding domain, ferredoxin reductase-type (11.1%)" YILIHPAQFTLPIRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.6.1.- (84.6%) 2.6.1.9 (11.5%) 4.1.1.81 (3.8%)" "Transaminases (84.6%) histidinol-phosphate transaminase (11.5%) threonine-phosphate decarboxylase (3.8%)" GO:0000105 (26%) "GO:0030170 (35.6%) GO:0008483 (20.5%) GO:0004400 (13.7%)" L-histidine biosynthetic process (26%) "pyridoxal phosphate binding (35.6%) transaminase activity (20.5%) histidinol-phosphate transaminase activity (13.7%)" "IPR004839 (17.8%) IPR015421 (17.8%) IPR015422 (17.8%)" "Aminotransferase, class I/classII, large domain (17.8%) Pyridoxal phosphate-dependent transferase, major domain (17.8%) Pyridoxal phosphate-dependent transferase, small domain (17.8%)" STISIIAAIADK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.5.1.3 (100%) dihydrofolate reductase (100%) "GO:0006730 (14%) GO:0046452 (14%) GO:0046654 (14%)" GO:0005829 (14%) "GO:0004146 (14%) GO:0050661 (14%) GO:0016301 (1.8%)" "one-carbon metabolic process (14%) dihydrofolate metabolic process (14%) tetrahydrofolate biosynthetic process (14%)" cytosol (14%) "dihydrofolate reductase activity (14%) NADP binding (14%) kinase activity (1.8%)" "IPR001796 (33.3%) IPR012259 (33.3%) IPR024072 (33.3%)" "Dihydrofolate reductase domain (33.3%) Dihydrofolate reductase (33.3%) Dihydrofolate reductase-like domain superfamily (33.3%)" VTVTDKQCEPMTITVNAGK Bacteria Bacteria "GO:0006979 (0.7%) GO:0009411 (0.7%) GO:0009636 (0.7%)" "GO:0042597 (96.6%) GO:0030288 (0.7%)" "response to oxidative stress (0.7%) response to UV (0.7%) response to toxic substance (0.7%)" "periplasmic space (96.6%) outer membrane-bounded periplasmic space (0.7%)" "IPR028096 (14.9%) IPR050894 (14.9%) IPR008972 (14.6%)" "EfeO-type cupredoxin-like domain (14.9%) Iron uptake system component EfeM/EfeO (14.9%) Cupredoxin (14.6%)" FAEGILLTLIEDGPK root "1.1.1.- (63.2%) 1.1.1.2 (28.1%) 1.1.1.1 (5.3%)" "With NAD(+) or NADP(+) as acceptor (63.2%) alcohol dehydrogenase (NADP(+)) (28.1%) alcohol dehydrogenase (5.3%)" GO:0000302 (0.1%) GO:0005829 (19.9%) "GO:1990362 (20%) GO:0008106 (19.9%) GO:1990002 (19.9%)" response to reactive oxygen species (0.1%) cytosol (19.9%) "butanol dehydrogenase (NAD+) activity (20%) alcohol dehydrogenase (NADP+) activity (19.9%) methylglyoxal reductase (NADPH) (acetol producing) activity (19.9%)" "IPR044731 (25.6%) IPR056798 (25.3%) IPR018211 (24.9%)" "Butanol dehydrogenase-like (25.6%) Fe-containing alcohol dehydrogenase-like, C-terminal (25.3%) Alcohol dehydrogenase, iron-type, conserved site (24.9%)" AQGAEIVNEENWGLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" GTCDHFGLTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.3.1.50 (58.3%) 2.3.1.47 (41.7%)" "serine C-palmitoyltransferase (58.3%) 8-amino-7-oxononanoate synthase (41.7%)" "GO:0030170 (45.9%) GO:0004758 (13.5%) GO:0008710 (13.5%)" "pyridoxal phosphate binding (45.9%) serine C-palmitoyltransferase activity (13.5%) 8-amino-7-oxononanoate synthase activity (13.5%)" "IPR001917 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class-II, pyridoxal-phosphate binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" ACEMECPKNISVSNIAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.3.5.1 (33.3%) 1.3.5.4 (33.3%) 1.3.99.1 (33.3%)" "succinate dehydrogenase (33.3%) Transferred entry: 1.3.5.1 (33.3%) Deleted entry (33.3%)" "GO:0009060 (24.7%) GO:0022904 (24.7%)" "GO:0009055 (24.7%) GO:0051537 (24.7%) GO:0016491 (1.3%)" "aerobic respiration (24.7%) respiratory electron transport chain (24.7%)" "electron transfer activity (24.7%) 2 iron, 2 sulfur cluster binding (24.7%) oxidoreductase activity (1.3%)" "IPR006058 (14.3%) IPR009051 (14.3%) IPR012675 (14.3%)" "2Fe-2S ferredoxin, iron-sulphur binding site (14.3%) Alpha-helical ferredoxin (14.3%) Beta-grasp domain superfamily (14.3%)" LAPFTDFPIIFISAMTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) GO:0042254 (28.6%) "GO:0005525 (28.6%) GO:0043022 (28.6%) GO:0016787 (14.3%)" ribosome biogenesis (28.6%) "GTP binding (28.6%) ribosome binding (28.6%) hydrolase activity (14.3%)" "IPR005225 (14.3%) IPR006073 (14.3%) IPR015946 (14.3%)" "Small GTP-binding domain (14.3%) GTP binding domain (14.3%) K homology domain-like, alpha/beta (14.3%)" VIAEHNLLLIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.5%)" "GO:0003735 (24.9%) GO:0019843 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.5%)" "structural constituent of ribosome (24.9%) rRNA binding (24.9%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" IVESEYGFHIIQLIEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0003755 (95.6%) GO:0016853 (2.2%) GO:0046872 (2.2%)" "peptidyl-prolyl cis-trans isomerase activity (95.6%) isomerase activity (2.2%) metal ion binding (2.2%)" "IPR000297 (24.9%) IPR027304 (24.9%) IPR046357 (24.9%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (24.9%) Trigger factor/SurA domain superfamily (24.9%) Peptidyl-prolyl cis-trans isomerase domain superfamily (24.9%)" VGMELGMQPHLIKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (12.5%) IPR004739 (12.5%) IPR014729 (12.5%)" "GMP synthase, C-terminal (12.5%) GMP synthase, glutamine amidotransferase (12.5%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" DGLAEDEQKNAEAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006415 (33.1%) GO:0006412 (0.8%)" GO:0005737 (33.1%) GO:0043023 (33.1%) "translational termination (33.1%) translation (0.8%)" cytoplasm (33.1%) ribosomal large subunit binding (33.1%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" ACEEDPGLELGLNIVEGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.1.1 (100%) alanine dehydrogenase (100%) GO:0042853 (25%) GO:0005886 (25%) "GO:0000166 (25%) GO:0000286 (25%)" L-alanine catabolic process (25%) plasma membrane (25%) "nucleotide binding (25%) alanine dehydrogenase activity (25%)" "IPR007698 (16.7%) IPR007886 (16.7%) IPR008141 (16.7%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (16.7%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (16.7%) Alanine dehydrogenase (16.7%)" ALLETVGPHGEFIDSNMGR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.1.3.11 (50%) 5.1.3.8 (50%)" "cellobiose epimerase (50%) N-acylglucosamine 2-epimerase (50%)" GO:0005975 (46.2%) "GO:0016853 (38.5%) GO:0047736 (7.7%) GO:0050121 (7.7%)" carbohydrate metabolic process (46.2%) "isomerase activity (38.5%) cellobiose epimerase activity (7.7%) N-acylglucosamine 2-epimerase activity (7.7%)" "IPR010819 (35.1%) IPR008928 (32.4%) IPR012341 (32.4%)" "N-acylglucosamine 2-epimerase/Cellobiose 2-epimerase (35.1%) Six-hairpin glycosidase superfamily (32.4%) Six-hairpin glycosidase-like superfamily (32.4%)" GTVVHYLNSDEPVVEYHLWTPQWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) GAFTEAEAEAKFEAWKNNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" YAVVATTRPETIMGDTAMCINPNDPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (20%) GO:0005829 (20%) "GO:0002161 (20%) GO:0004832 (20%) GO:0005524 (20%)" valyl-tRNA aminoacylation (20%) cytosol (20%) "aminoacyl-tRNA deacylase activity (20%) valine-tRNA ligase activity (20%) ATP binding (20%)" "IPR002300 (9.3%) IPR002303 (9.3%) IPR009008 (9.3%)" "Aminoacyl-tRNA synthetase, class Ia (9.3%) Valine-tRNA ligase (9.3%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (9.3%)" KLPEDTPVTAQTSIGDNGEIVESTVR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0051274 (25.3%) GO:0030288 (25.3%) "GO:0030246 (24.7%) GO:0003824 (24.3%) GO:0016740 (0.4%)" beta-glucan biosynthetic process (25.3%) outer membrane-bounded periplasmic space (25.3%) "carbohydrate binding (24.7%) catalytic activity (24.3%) transferase activity (0.4%)" "IPR007444 (14.6%) IPR013783 (14.6%) IPR014438 (14.6%)" "Glucan biosynthesis, periplasmic, MdoG C-terminal (14.6%) Immunoglobulin-like fold (14.6%) Glucan biosynthesis protein MdoG/MdoD (14.6%)" AAGEKPENGVFWESAGEGEYTVADITKEDR root "GO:0006457 (0.2%) GO:0006974 (0.2%) GO:0009408 (0.2%)" "GO:0005737 (19.5%) GO:0005829 (0.2%) GO:0005886 (0.2%)" "GO:0005524 (19.6%) GO:0016887 (19.6%) GO:0051082 (19.6%)" "protein folding (0.2%) DNA damage response (0.2%) response to heat (0.2%)" "cytoplasm (19.5%) cytosol (0.2%) plasma membrane (0.2%)" "ATP binding (19.6%) ATP hydrolysis activity (19.6%) unfolded protein binding (19.6%)" "IPR001404 (14.9%) IPR020575 (14.9%) IPR036890 (14.9%)" "Heat shock protein Hsp90 family (14.9%) Heat shock protein Hsp90, N-terminal (14.9%) Histidine kinase/HSP90-like ATPase superfamily (14.9%)" LLQDTWFSMGEIGAGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.13.11.24 (100%) quercetin 2,3-dioxygenase (100%) "GO:0046872 (89.5%) GO:0008127 (10.5%)" "metal ion binding (89.5%) quercetin 2,3-dioxygenase activity (10.5%)" "IPR003829 (20%) IPR011051 (20%) IPR012093 (20%)" "Pirin, N-terminal domain (20%) RmlC-like cupin domain superfamily (20%) Pirin (20%)" LNMNTEQPGFDFDKVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.5%) GO:0006516 (19.5%)" GO:0005829 (19.5%) "GO:0000224 (19.5%) GO:0030246 (19.5%) GO:0016798 (2.3%)" "carbohydrate metabolic process (19.5%) glycoprotein catabolic process (19.5%)" cytosol (19.5%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.5%) carbohydrate binding (19.5%) hydrolase activity, acting on glycosyl bonds (2.3%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" AEIEGDMGDSK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006281 (12.9%) GO:0006310 (12.9%) GO:0009432 (11.2%)" GO:0005829 (12.9%) "GO:0003697 (12.9%) GO:0005524 (12.9%) GO:0140664 (12.9%)" "DNA repair (12.9%) DNA recombination (12.9%) SOS response (11.2%)" cytosol (12.9%) "single-stranded DNA binding (12.9%) ATP binding (12.9%) ATP-dependent DNA damage sensor activity (12.9%)" "IPR013765 (11.6%) IPR020587 (11.6%) IPR020588 (11.6%)" "DNA recombination and repair protein RecA (11.6%) DNA recombination and repair protein RecA, monomer-monomer interface (11.6%) DNA recombination and repair protein RecA-like, ATP-binding domain (11.6%)" FNSLTPEQQRDVIAR root 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (0.1%) GO:0006950 (0.1%)" "GO:0005829 (41.4%) GO:0005737 (0.1%)" "GO:0008861 (52.4%) GO:0016829 (5.7%) GO:0003824 (0.2%)" "glucose metabolic process (0.1%) response to stress (0.1%)" "cytosol (41.4%) cytoplasm (0.1%)" "formate C-acetyltransferase activity (52.4%) lyase activity (5.7%) catalytic activity (0.2%)" "IPR001150 (25.2%) IPR019777 (25.1%) IPR050244 (25.1%)" "Glycine radical domain (25.2%) Formate C-acetyltransferase glycine radical, conserved site (25.1%) Autonomous Glycyl Radical Cofactor (25.1%)" QVPSVDALLDMGHGVNLTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0000166 (25%) GO:0047850 (25%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "nucleotide binding (25%) diaminopimelate dehydrogenase activity (25%)" "IPR000683 (25%) IPR010190 (25%) IPR032094 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Diaminopimelate dehydrogenase, Ddh (25%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25%)" NCDVIIGTPFTHLASVAAAIDTDKIGVAAENCADKEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" SPFDVAQNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006412 (17.9%) GO:0042254 (14.3%)" "GO:0015935 (17.9%) GO:0005737 (14.3%)" "GO:0003735 (17.9%) GO:0019843 (17.9%)" "translation (17.9%) ribosome biogenesis (14.3%)" "small ribosomal subunit (17.9%) cytoplasm (14.3%)" "structural constituent of ribosome (17.9%) rRNA binding (17.9%)" "IPR000851 (14.3%) IPR005324 (14.3%) IPR005712 (14.3%)" "Small ribosomal subunit protein uS5 (14.3%) Small ribosomal subunit protein uS5, C-terminal (14.3%) Small ribosomal subunit protein uS5, bacteria (14.3%)" GKVPGFNPYR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.7.11 (50%) 1.2.7.3 (50%)" "2-oxoacid oxidoreductase (ferredoxin) (50%) 2-oxoglutarate synthase (50%)" GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.5%) IPR002880 (12.5%) IPR009014 (12.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" VVATLFFEPSTR root 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006520 (16.8%) GO:0006207 (16.5%) GO:0044205 (16.5%)" "GO:0005829 (16.5%) GO:0016020 (0.1%)" "GO:0016597 (16.8%) GO:0004070 (16.5%) GO:0016743 (0.3%)" "amino acid metabolic process (16.8%) 'de novo' pyrimidine nucleobase biosynthetic process (16.5%) 'de novo' UMP biosynthetic process (16.5%)" "cytosol (16.5%) membrane (0.1%)" "amino acid binding (16.8%) aspartate carbamoyltransferase activity (16.5%) carboxyl- or carbamoyltransferase activity (0.3%)" "IPR006130 (20.2%) IPR006132 (20.2%) IPR036901 (20.1%)" "Aspartate/ornithine carbamoyltransferase (20.2%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20.2%) Aspartate/ornithine carbamoyltransferase superfamily (20.1%)" GALDCSGVKDRK root "GO:0006412 (19.9%) GO:0000028 (0%) GO:0000372 (0%)" "GO:0015935 (19.9%) GO:0005840 (0.5%) GO:0005737 (0%)" "GO:0003735 (19.9%) GO:0019843 (19.8%) GO:0000049 (19.7%)" "translation (19.9%) ribosomal small subunit assembly (0%) Group I intron splicing (0%)" "small ribosomal subunit (19.9%) ribosome (0.5%) cytoplasm (0%)" "structural constituent of ribosome (19.9%) rRNA binding (19.8%) tRNA binding (19.7%)" "IPR005679 (33.3%) IPR006032 (33.3%) IPR012340 (33.2%)" "Ribosomal protein uS12, bacteria (33.3%) Small ribosomal subunit protein uS12 (33.3%) Nucleic acid-binding, OB-fold (33.2%)" LTNSTGVATFIFTYDKWFESNKDR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR008964 (50%) IPR013783 (50%)" "Invasin/intimin cell-adhesion fragments (50%) Immunoglobulin-like fold (50%)" VVNVGDVVEVMVLDIDEER root "GO:0006412 (24.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.6%) GO:0005840 (0.5%) GO:1990904 (0.1%)" "GO:0003735 (24.8%) GO:0003729 (24.8%) GO:0016491 (0.1%)" "translation (24.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.6%) ribosome (0.5%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.8%) mRNA binding (24.8%) oxidoreductase activity (0.1%)" "IPR003029 (20.2%) IPR012340 (20.2%) IPR050437 (20.2%)" "S1 domain (20.2%) Nucleic acid-binding, OB-fold (20.2%) Small ribosomal subunit protein bS1-like (20.2%)" AGATVVNIPDTTGYCLPEEYGAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.3.3.13 (100%) 2-isopropylmalate synthase (100%) GO:0009098 (22.3%) GO:0005737 (18.5%) "GO:0003852 (22.3%) GO:0003985 (18.5%) GO:0030145 (18.5%)" L-leucine biosynthetic process (22.3%) cytoplasm (18.5%) "2-isopropylmalate synthase activity (22.3%) acetyl-CoA C-acetyltransferase activity (18.5%) manganese ion binding (18.5%)" "IPR000891 (13.4%) IPR002034 (13.4%) IPR013785 (13.4%)" "Pyruvate carboxyltransferase (13.4%) Alpha-isopropylmalate/homocitrate synthase, conserved site (13.4%) Aldolase-type TIM barrel (13.4%)" VAIVGASGAVGQEFLR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11%) GO:0009089 (11%) GO:0009097 (11%)" GO:0016020 (0.1%) "GO:0051287 (11.4%) GO:0004073 (11.1%) GO:0046983 (11.1%)" "threonine biosynthetic process (11%) lysine biosynthetic process via diaminopimelate (11%) isoleucine biosynthetic process (11%)" membrane (0.1%) "NAD binding (11.4%) aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%)" "IPR000534 (18.8%) IPR036291 (18.8%) IPR012280 (18.2%)" "Semialdehyde dehydrogenase, NAD-binding (18.8%) NAD(P)-binding domain superfamily (18.8%) Semialdehyde dehydrogenase, dimerisation domain (18.2%)" FKNFELSVDWK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016787 (100%) hydrolase activity (100%) IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) VKEGEPTQSVADQEAIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" SVDAMIPIGR root "7.1.2.2 (97.3%) 3.6.3.14 (2.6%) 3.6.3.- (0.1%)" "H(+)-transporting two-sector ATPase (97.3%) Transferred entry: 7.1.2.2 (2.6%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (0.1%)" GO:0015986 (0%) "GO:0045259 (18.9%) GO:0005886 (17.3%) GO:0009535 (0.7%)" "GO:0005524 (18.9%) GO:0046933 (18.9%) GO:0043531 (18.9%)" proton motive force-driven ATP synthesis (0%) "proton-transporting ATP synthase complex (18.9%) plasma membrane (17.3%) chloroplast thylakoid membrane (0.7%)" "ATP binding (18.9%) proton-transporting ATP synthase activity, rotational mechanism (18.9%) ADP binding (18.9%)" "IPR005294 (10.3%) IPR027417 (10.3%) IPR000194 (10.3%)" "ATP synthase, F1 complex, alpha subunit (10.3%) P-loop containing nucleoside triphosphate hydrolase (10.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.3%)" TLLASPLVAAAAAVTGVITDPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.33 (100%) 3-isopropylmalate dehydratase (100%) GO:0009098 (24.8%) "GO:0046872 (24.8%) GO:0051539 (24.8%) GO:0003861 (24.6%)" L-leucine biosynthetic process (24.8%) "metal ion binding (24.8%) 4 iron, 4 sulfur cluster binding (24.8%) 3-isopropylmalate dehydratase activity (24.6%)" "IPR001030 (14.4%) IPR015931 (14.4%) IPR036008 (14.4%)" "Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (14.4%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (14.4%) Aconitase, iron-sulfur domain (14.4%)" FYQFWLNVSDEDAAR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.9%) GO:0005829 (16.9%) "GO:0003723 (16.9%) GO:0004831 (16.9%) GO:0005524 (16.9%)" tyrosyl-tRNA aminoacylation (16.9%) cytosol (16.9%) "RNA binding (16.9%) tyrosine-tRNA ligase activity (16.9%) ATP binding (16.9%)" "IPR002305 (13.1%) IPR002307 (13.1%) IPR024088 (13.1%)" "Aminoacyl-tRNA synthetase, class Ic (13.1%) Tyrosine-tRNA ligase (13.1%) Tyrosine-tRNA ligase, bacterial-type (13.1%)" ADIDYCHAEALTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20.2%) "GO:0022627 (20.2%) GO:0005840 (0.2%)" "GO:0003735 (20.2%) GO:0019843 (20.2%) GO:0003729 (18.9%)" translation (20.2%) "cytosolic small ribosomal subunit (20.2%) ribosome (0.2%)" "structural constituent of ribosome (20.2%) rRNA binding (20.2%) mRNA binding (18.9%)" "IPR001351 (11.2%) IPR004044 (11.2%) IPR005704 (11.2%)" "Small ribosomal subunit protein uS3, C-terminal (11.2%) K Homology domain, type 2 (11.2%) Small ribosomal subunit protein uS3, bacteria (11.2%)" VGSEVPCVQDAEYFR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" IEADELPTIPVGNSEALK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.4.21.- (60%) 3.4.21.107 (40%)" "Serine endopeptidases (60%) peptidase Do (40%)" GO:0006508 (46.4%) "GO:0030313 (3.6%) GO:0042597 (3.6%)" GO:0004252 (46.4%) proteolysis (46.4%) "cell envelope (3.6%) periplasmic space (3.6%)" serine-type endopeptidase activity (46.4%) "IPR001478 (16.9%) IPR001940 (16.9%) IPR009003 (16.9%)" "PDZ domain (16.9%) Peptidase S1C (16.9%) Peptidase S1, PA clan (16.9%)" DTYADPAQWDEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.2%) GO:0005829 (18.2%) "GO:0004612 (18.2%) GO:0005524 (18.2%) GO:0046872 (18.2%)" gluconeogenesis (18.2%) cytosol (18.2%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.2%) ATP binding (18.2%) metal ion binding (18.2%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" SGTFINGILDSIVNELKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006353 (25%) GO:0031564 (25%)" GO:0005829 (25%) GO:0003723 (25%) "DNA-templated transcription termination (25%) transcription antitermination (25%)" cytosol (25%) RNA binding (25%) "IPR006027 (33.3%) IPR011605 (33.3%) IPR035926 (33.3%)" "NusB/RsmB/TIM44 (33.3%) NusB antitermination factor (33.3%) NusB-like superfamily (33.3%)" SGKGFIETLENHLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" WFNESKGFGFITPADGSK root "GO:0010468 (0.2%) GO:0000917 (0.1%) GO:0006508 (0.1%)" "GO:0005829 (48.8%) GO:0005737 (0.5%) GO:0005886 (0.1%)" "GO:0003676 (27.4%) GO:0003677 (22.1%) GO:0001072 (0.1%)" "regulation of gene expression (0.2%) division septum assembly (0.1%) proteolysis (0.1%)" "cytosol (48.8%) cytoplasm (0.5%) plasma membrane (0.1%)" "nucleic acid binding (27.4%) DNA binding (22.1%) transcription antitermination factor activity, RNA binding (0.1%)" "IPR002059 (16.8%) IPR012340 (16.8%) IPR019844 (16.7%)" "Cold-shock protein Csp, DNA-binding (16.8%) Nucleic acid-binding, OB-fold (16.8%) Cold-shock domain, conserved site (16.7%)" FASVLGEIAADFAQDKK root "1.5.3.- (98.6%) 1.5.3.2 (1.4%)" "With oxygen as acceptor (98.6%) N-methyl-L-amino-acid oxidase (1.4%)" GO:0006974 (0.2%) GO:0005829 (25.2%) "GO:0008115 (25.2%) GO:0050660 (25.2%) GO:0050131 (24%)" DNA damage response (0.2%) cytosol (25.2%) "sarcosine oxidase activity (25.2%) flavin adenine dinucleotide binding (25.2%) N-methyl-L-amino-acid oxidase activity (24%)" "IPR036188 (25.5%) IPR006076 (25.3%) IPR045170 (25.3%)" "FAD/NAD(P)-binding domain superfamily (25.5%) FAD dependent oxidoreductase (25.3%) MTOX family (25.3%)" TPVIVQANCVR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (30.4%) GO:0003863 (2.9%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (30.4%) branched-chain 2-oxo acid dehydrogenase activity (2.9%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" IGFPCVVKPLMSSSGK root "6.3.1.21 (91.7%) 2.1.2.- (7.4%) 2.1.2.2 (0.9%)" "phosphoribosylglycinamide formyltransferase 2 (91.7%) Hydroxymethyl-, formyl- and related transferases (7.4%) phosphoribosylglycinamide formyltransferase 1 (0.9%)" "GO:0006189 (16%) GO:0006164 (0.5%) GO:0009152 (0.2%)" GO:0005829 (16.6%) "GO:0005524 (16.7%) GO:0000287 (16.2%) GO:0004644 (16.2%)" "'de novo' IMP biosynthetic process (16%) purine nucleotide biosynthetic process (0.5%) purine ribonucleotide biosynthetic process (0.2%)" cytosol (16.6%) "ATP binding (16.7%) magnesium ion binding (16.2%) phosphoribosylglycinamide formyltransferase activity (16.2%)" "IPR003135 (13%) IPR011761 (13%) IPR013815 (13%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (13%) ATP-grasp fold (13%) ATP-grasp fold, subdomain 1 (13%)" ESYKNQFGTEPAVK Bacteroides fragilis CL07T12C05 Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis Bacteroides fragilis CL07T12C05 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" IVCPSFADDAAGLLR Pseudomonadati Bacteria Pseudomonadati 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (28.5%) GO:0003863 (3.8%) GO:0016491 (1%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (28.5%) branched-chain 2-oxo acid dehydrogenase activity (3.8%) oxidoreductase activity (1%)" "IPR009014 (20.2%) IPR029061 (20.2%) IPR033248 (20.2%)" "Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20.2%) Thiamin diphosphate-binding fold (20.2%) Transketolase, C-terminal domain (20.2%)" ANDNHAVGYGDDPWTEAATSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.2.48 (100%) low-specificity L-threonine aldolase (100%) GO:0006520 (40.6%) "GO:0016829 (40.6%) GO:0008483 (18.8%)" amino acid metabolic process (40.6%) "lyase activity (40.6%) transaminase activity (18.8%)" "IPR001597 (25%) IPR015421 (25%) IPR015422 (25%)" "Aromatic amino acid beta-eliminating lyase/threonine aldolase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%) Pyridoxal phosphate-dependent transferase, small domain (25%)" EAPFHAITR Bacteria Bacteria "1.17.4.2 (99.1%) 1.1.98.6 (0.9%)" "ribonucleoside-triphosphate reductase (thioredoxin) (99.1%) ribonucleoside-triphosphate reductase (formate) (0.9%)" "GO:0006260 (16.7%) GO:0009265 (16.7%)" GO:0031250 (16.7%) "GO:0008998 (16.7%) GO:0004748 (16.6%) GO:0005524 (15.9%)" "DNA replication (16.7%) 2'-deoxyribonucleotide biosynthetic process (16.7%)" anaerobic ribonucleoside-triphosphate reductase complex (16.7%) "ribonucleoside-triphosphate reductase (thioredoxin) activity (16.7%) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.6%) ATP binding (15.9%)" "IPR012833 (51.3%) IPR005144 (48.7%)" "Ribonucleoside-triphosphate reductase, anaerobic (51.3%) ATP-cone domain (48.7%)" QEGTFMPMVASDGPHYGANIK Bacteria Bacteria GO:0016020 (50%) GO:0046872 (50%) membrane (50%) metal ion binding (50%) "IPR018470 (50%) IPR038482 (50%)" "Periplasmic metal-binding protein Tp34-type (50%) Periplasmic metal-binding protein Tp34-type superfamily (50%)" VLIKPAAAEEK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0051085 (0.6%) GO:0005737 (16.6%) "GO:0005524 (16.6%) GO:0044183 (16.6%) GO:0046872 (16.6%)" obsolete chaperone cofactor-dependent protein refolding (0.6%) cytoplasm (16.6%) "ATP binding (16.6%) protein folding chaperone (16.6%) metal ion binding (16.6%)" "IPR011032 (25%) IPR018369 (25%) IPR020818 (25%)" "GroES-like superfamily (25%) Chaperonin GroES, conserved site (25%) GroES chaperonin family (25%)" EAFAKGEGLVLQDNPAEKEYPMPLFLAGKDPVYVGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11%) GO:0009089 (11%) GO:0009097 (11%)" "GO:0004073 (11.4%) GO:0046983 (11.4%) GO:0050661 (11%)" "threonine biosynthetic process (11%) lysine biosynthetic process via diaminopimelate (11%) isoleucine biosynthetic process (11%)" "aspartate-semialdehyde dehydrogenase activity (11.4%) protein dimerization activity (11.4%) NADP binding (11%)" "IPR012280 (20.6%) IPR000534 (19.8%) IPR005986 (19.8%)" "Semialdehyde dehydrogenase, dimerisation domain (20.6%) Semialdehyde dehydrogenase, NAD-binding (19.8%) Aspartate-semialdehyde dehydrogenase, beta-type (19.8%)" MITEDGYDLVSGYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.4.-.- (63.6%) 2.4.2.53 (36.4%)" "Glycosyltransferases (63.6%) undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (36.4%)" GO:0009103 (33.3%) GO:0005886 (33.3%) GO:0099621 (33.3%) lipopolysaccharide biosynthetic process (33.3%) plasma membrane (33.3%) undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase activity (33.3%) "IPR001173 (33.3%) IPR029044 (33.3%) IPR050256 (33.3%)" "Glycosyltransferase 2-like (33.3%) Nucleotide-diphospho-sugar transferases (33.3%) Glycosyltransferase 2 (33.3%)" AGWDTHGLPVELGVEK root 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.4%) GO:0005737 (14.2%) "GO:0004822 (14.4%) GO:0005524 (14.4%) GO:0002161 (14.2%)" isoleucyl-tRNA aminoacylation (14.4%) cytoplasm (14.2%) "isoleucine-tRNA ligase activity (14.4%) ATP binding (14.4%) aminoacyl-tRNA deacylase activity (14.2%)" "IPR002300 (12.1%) IPR023586 (12.1%) IPR014729 (12%)" "Aminoacyl-tRNA synthetase, class Ia (12.1%) Isoleucine-tRNA ligase, type 2 (12.1%) Rossmann-like alpha/beta/alpha sandwich fold (12%)" TNAALHEVGAL Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.37 (94.7%) 1.1.1.- (5.3%)" "malate dehydrogenase (94.7%) With NAD(+) or NADP(+) as acceptor (5.3%)" "GO:0006089 (25%) GO:0006099 (23.5%)" "GO:0004459 (25%) GO:0030060 (25%) GO:0016616 (1.5%)" "lactate metabolic process (25%) tricarboxylic acid cycle (23.5%)" "L-lactate dehydrogenase (NAD+) activity (25%) L-malate dehydrogenase (NAD+) activity (25%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (1.5%)" "IPR022383 (17.8%) IPR001236 (16.8%) IPR011275 (16.8%)" "Lactate/malate dehydrogenase, C-terminal (17.8%) Lactate/malate dehydrogenase, N-terminal (16.8%) Malate dehydrogenase, type 3 (16.8%)" DTQATFHYEPVPTSDKMQYFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" ATTSNDEKEIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005975 (66.7%) GO:0016787 (33.3%) carbohydrate metabolic process (66.7%) hydrolase activity (33.3%) "IPR008313 (33.3%) IPR008928 (33.3%) IPR012341 (33.3%)" "Metal-independent alpha-mannosidase (33.3%) Six-hairpin glycosidase superfamily (33.3%) Six-hairpin glycosidase-like superfamily (33.3%)" LNTLSPAEGSK root "GO:0006412 (24.8%) GO:0002181 (0%)" "GO:0022625 (24.8%) GO:0005840 (0.6%) GO:1990904 (0.2%)" "GO:0003735 (24.8%) GO:0019843 (24.7%)" "translation (24.8%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.8%) ribosome (0.6%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (24.8%) rRNA binding (24.7%)" "IPR036227 (20.4%) IPR005749 (20.3%) IPR030878 (20.1%)" "Large ribosomal subunit protein uL15/eL18 superfamily (20.4%) Large ribosomal subunit protein uL15, bacteria (20.3%) Large ribosomal subunit protein uL15 (20.1%)" VAGVTINNSAGGVGSASR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0044718 (33.3%) GO:0009279 (33.3%) GO:0015344 (33.3%) siderophore transmembrane transport (33.3%) cell outer membrane (33.3%) siderophore uptake transmembrane transporter activity (33.3%) "IPR000531 (11.2%) IPR012910 (11.2%) IPR023996 (11.2%)" "TonB-dependent receptor-like, beta-barrel (11.2%) TonB-dependent receptor, plug domain (11.2%) TonB-dependent outer membrane protein, SusC/RagA (11.2%)" VNEALEKDEIIKGYIK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (24.2%) "GO:0022627 (23.2%) GO:1990904 (1.4%) GO:0005737 (0.9%)" "GO:0003729 (24.6%) GO:0003735 (24.6%)" translation (24.2%) "cytosolic small ribosomal subunit (23.2%) ribonucleoprotein complex (1.4%) cytoplasm (0.9%)" "mRNA binding (24.6%) structural constituent of ribosome (24.6%)" "IPR003029 (23.6%) IPR012340 (23.6%) IPR035104 (23.6%)" "S1 domain (23.6%) Nucleic acid-binding, OB-fold (23.6%) Ribosomal protein S1-like (23.6%)" SYAIAASGNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (7.7%) IPR003029 (7.7%) IPR004087 (7.7%)" "Exoribonuclease, phosphorolytic domain 1 (7.7%) S1 domain (7.7%) K Homology domain (7.7%)" NYDDQSGVKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006260 (33.3%) GO:0009295 (33.3%) GO:0003697 (33.3%) DNA replication (33.3%) nucleoid (33.3%) single-stranded DNA binding (33.3%) "IPR000424 (33.3%) IPR011344 (33.3%) IPR012340 (33.3%)" "Primosome PriB/single-strand DNA-binding (33.3%) Single-stranded DNA-binding protein (33.3%) Nucleic acid-binding, OB-fold (33.3%)" LHNIEQQLLSMFGDTDGKR root "1.11.1.- (60.4%) 4.99.1.1 (33.7%) 4.98.1.1 (4%)" "Peroxidases (60.4%) Transferred entry: 4.98.1.1 (33.7%) protoporphyrin ferrochelatase (4%)" "GO:0006535 (0.1%) GO:0007089 (0.1%) GO:0019343 (0.1%)" "GO:0005829 (32.2%) GO:0005737 (0.1%) GO:0042597 (0.1%)" "GO:0004601 (32.6%) GO:0020037 (32.2%) GO:0016829 (1.9%)" "cysteine biosynthetic process from serine (0.1%) traversing start control point of mitotic cell cycle (0.1%) cysteine biosynthetic process via cystathionine (0.1%)" "cytosol (32.2%) cytoplasm (0.1%) periplasmic space (0.1%)" "peroxidase activity (32.6%) heme binding (32.2%) lyase activity (1.9%)" "IPR006314 (24.9%) IPR011008 (24.9%) IPR048328 (24.9%)" "Dyp-type peroxidase (24.9%) Dimeric alpha-beta barrel (24.9%) Dyp-type peroxidase, C-terminal domain (24.9%)" YKVEGDAEGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (20%) GO:0005829 (20%) "GO:0002161 (20%) GO:0004832 (20%) GO:0005524 (20%)" valyl-tRNA aminoacylation (20%) cytosol (20%) "aminoacyl-tRNA deacylase activity (20%) valine-tRNA ligase activity (20%) ATP binding (20%)" "IPR002300 (9.4%) IPR002303 (9.4%) IPR009008 (9.4%)" "Aminoacyl-tRNA synthetase, class Ia (9.4%) Valine-tRNA ligase (9.4%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (9.4%)" YKDSGSDMVLVGLLR root 2.4.2.8 (100%) hypoxanthine phosphoribosyltransferase (100%) "GO:0006178 (10%) GO:0032263 (10%) GO:0032264 (10%)" "GO:0005829 (10%) GO:0032991 (0.1%)" "GO:0000287 (10%) GO:0004422 (10%) GO:0052657 (9.9%)" "guanine salvage (10%) GMP salvage (10%) IMP salvage (10%)" "cytosol (10%) protein-containing complex (0.1%)" "magnesium ion binding (10%) hypoxanthine phosphoribosyltransferase activity (10%) guanine phosphoribosyltransferase activity (9.9%)" "IPR029057 (25.8%) IPR000836 (25.2%) IPR050408 (25.2%)" "Phosphoribosyltransferase-like (25.8%) Phosphoribosyltransferase domain (25.2%) Hypoxanthine-guanine phosphoribosyltransferase (25.2%)" IIGVENFPEAVDFAPCK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.-.-.- (100%) Hydrolases (100%) GO:0005829 (25%) "GO:0000287 (25%) GO:0016289 (25%) GO:0016791 (25%)" cytosol (25%) "magnesium ion binding (25%) acyl-CoA hydrolase activity (25%) phosphatase activity (25%)" "IPR000150 (14.3%) IPR003736 (14.3%) IPR006379 (14.3%)" "Cof family (14.3%) Phenylacetic acid degradation-related domain (14.3%) HAD-superfamily hydrolase, subfamily IIB (14.3%)" MPEEMNGGNNGPDGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR021857 (100%) Protein of unknown function DUF3467 (100%) LLRENDTAEQMRDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033103 (50%) GO:0033104 (50%) protein secretion by the type VI secretion system (50%) type VI protein secretion system complex (50%) IPR035576 (100%) Type VI secretion system TssC (100%) IALKSEVAVPGIDASTFDGIIQK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.11.1.15 (75%) 1.11.1.- (16.7%) 1.11.1.24 (8.3%)" "Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (75%) Peroxidases (16.7%) thioredoxin-dependent peroxiredoxin (8.3%)" "GO:0006979 (33%) GO:0006972 (0.3%) GO:0033194 (0.3%)" "GO:0005737 (30.6%) GO:0005829 (0.3%)" "GO:0004601 (30.9%) GO:0051920 (4.2%) GO:0042803 (0.3%)" "response to oxidative stress (33%) hyperosmotic response (0.3%) response to hydroperoxide (0.3%)" "cytoplasm (30.6%) cytosol (0.3%)" "peroxidase activity (30.9%) peroxiredoxin activity (4.2%) protein homodimerization activity (0.3%)" "IPR015946 (20.3%) IPR036102 (20.3%) IPR052707 (20.3%)" "K homology domain-like, alpha/beta (20.3%) OsmC/Ohr superfamily (20.3%) OsmC/Ohr Peroxiredoxin (20.3%)" FCSVNYDVTFPIMAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0034599 (50%) GO:0004601 (50%) cellular response to oxidative stress (50%) peroxidase activity (50%) "IPR000889 (25%) IPR013766 (25%) IPR029759 (25%)" "Glutathione peroxidase (25%) Thioredoxin domain (25%) Glutathione peroxidase active site (25%)" VAVIGGGNTAMDSVR Pseudomonadati Bacteria Pseudomonadati "1.4.1.13 (88.9%) 1.4.1.14 (11.1%)" "glutamate synthase (NADPH) (88.9%) glutamate synthase (NADH) (11.1%)" "GO:0051536 (48.2%) GO:0016491 (36.2%) GO:0004355 (13%)" "iron-sulfur cluster binding (48.2%) oxidoreductase activity (36.2%) glutamate synthase (NADPH) activity (13%)" "IPR036188 (12.1%) IPR023753 (12%) IPR009051 (11.8%)" "FAD/NAD(P)-binding domain superfamily (12.1%) FAD/NAD(P)-binding domain (12%) Alpha-helical ferredoxin (11.8%)" MKEEAAANAEADKKEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005737 (21.4%) GO:0070013 (7.1%)" "GO:0005524 (23.8%) GO:0051082 (23.8%) GO:0140662 (23.8%)" "cytoplasm (21.4%) intracellular organelle lumen (7.1%)" "ATP binding (23.8%) unfolded protein binding (23.8%) ATP-dependent protein folding chaperone (23.8%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" MKTLESLVAEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25%) GO:0044205 (25%)" "GO:0000287 (25%) GO:0004588 (25%)" "pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" "magnesium ion binding (25%) orotate phosphoribosyltransferase activity (25%)" "IPR000836 (25%) IPR004467 (25%) IPR023031 (25%)" "Phosphoribosyltransferase domain (25%) Orotate phosphoribosyl transferase domain (25%) Orotate phosphoribosyltransferase (25%)" VKEGDPNLGVIAETLTEHGTR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 6.3.2.3 (100%) glutathione synthase (100%) "GO:0006750 (0.2%) GO:0051289 (0.2%)" "GO:0005737 (24.6%) GO:0005829 (0.2%)" "GO:0004363 (24.8%) GO:0005524 (24.8%) GO:0046872 (24.1%)" "glutathione biosynthetic process (0.2%) protein homotetramerization (0.2%)" "cytoplasm (24.6%) cytosol (0.2%)" "glutathione synthase activity (24.8%) ATP binding (24.8%) metal ion binding (24.1%)" "IPR004218 (17.1%) IPR013815 (16.9%) IPR006284 (16.8%)" "Prokaryotic glutathione synthetase, ATP-binding (17.1%) ATP-grasp fold, subdomain 1 (16.9%) Glutathione synthetase, prokaryotic (16.8%)" MIPGFEDGIKGHK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0051301 (12.6%) GO:0015031 (12.5%) GO:0043335 (11.6%)" "GO:0005737 (12.5%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0003755 (12.7%) GO:0043022 (11.6%) GO:0044183 (11.6%)" "cell division (12.6%) protein transport (12.5%) protein unfolding (11.6%)" "cytoplasm (12.5%) cytosol (0.1%) membrane (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (12.7%) ribosome binding (11.6%) protein folding chaperone (11.6%)" "IPR001179 (12.9%) IPR046357 (12.8%) IPR037041 (12.8%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (12.9%) Peptidyl-prolyl cis-trans isomerase domain superfamily (12.8%) Trigger factor, C-terminal domain superfamily (12.8%)" LCDISKEYGIENTFIHCFMDGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (19.9%) GO:0006096 (19.9%)" GO:0005829 (19.9%) "GO:0004619 (19.9%) GO:0030145 (19.9%) GO:0016853 (0.4%)" "glucose catabolic process (19.9%) glycolytic process (19.9%)" cytosol (19.9%) "phosphoglycerate mutase activity (19.9%) manganese ion binding (19.9%) isomerase activity (0.4%)" "IPR005995 (20.2%) IPR011258 (20.2%) IPR036646 (20.2%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.2%) BPG-independent PGAM, N-terminal (20.2%) BPG-independent phosphoglycerate mutase, domain B superfamily (20.2%)" LNHNELLTYPNSYNQIVFGTVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (50%) GO:0004332 (50%) glycolytic process (50%) fructose-bisphosphate aldolase activity (50%) "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" AKNTNNWFVGGITGENAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.22 (100%) alpha-galactosidase (100%) "GO:0030246 (70.4%) GO:0016787 (25.9%) GO:0004557 (3.7%)" "carbohydrate binding (70.4%) hydrolase activity (25.9%) alpha-galactosidase activity (3.7%)" "IPR013785 (13.7%) IPR014718 (13.7%) IPR017853 (13.7%)" "Aldolase-type TIM barrel (13.7%) Glycoside hydrolase-type carbohydrate-binding (13.7%) Glycoside hydrolase superfamily (13.7%)" LRMEVDSVPEGLDEISR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0034605 (19.6%) GO:0042026 (19.6%) GO:0006508 (1.1%)" GO:0005737 (19.6%) "GO:0005524 (19.6%) GO:0016887 (19.6%) GO:0008233 (1.1%)" "cellular response to heat (19.6%) protein refolding (19.6%) proteolysis (1.1%)" cytoplasm (19.6%) "ATP binding (19.6%) ATP hydrolysis activity (19.6%) peptidase activity (1.1%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" TAGLDSSQGPTAAK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0015820 (49%) GO:0006865 (1.3%) GO:0015818 (0.1%)" "GO:0030288 (48.9%) GO:0016020 (0.1%) GO:0042597 (0.1%)" GO:0070728 (0.1%) "L-leucine transport (49%) amino acid transport (1.3%) isoleucine transport (0.1%)" "outer membrane-bounded periplasmic space (48.9%) membrane (0.1%) periplasmic space (0.1%)" L-leucine binding (0.1%) "IPR028081 (33.5%) IPR028082 (33.5%) IPR000709 (33%)" "Leucine-binding protein domain (33.5%) Periplasmic binding protein-like I (33.5%) Leu/Ile/Val-binding protein (33%)" GVDPSLDKEALR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0015031 (18.1%) GO:0055085 (18.1%) GO:0015891 (13.7%)" "GO:0098797 (18.1%) GO:0030288 (13.7%)" GO:0031992 (18.1%) "protein transport (18.1%) transmembrane transport (18.1%) siderophore transport (13.7%)" "plasma membrane protein complex (18.1%) outer membrane-bounded periplasmic space (13.7%)" energy transducer activity (18.1%) "IPR006260 (25.5%) IPR037682 (25.5%) IPR051045 (25.5%)" "TonB/TolA, C-terminal (25.5%) TonB, C-terminal (25.5%) TonB-dependent transporter energy transducer (25.5%)" AVGDSLEAQQYGIAFPK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006865 (21.4%) GO:0006868 (0.2%) GO:1903803 (0.2%)" "GO:0016020 (25.6%) GO:0030288 (25.5%) GO:0030313 (0.6%)" "GO:0015276 (25.6%) GO:0016597 (0.2%) GO:0016787 (0.2%)" "amino acid transport (21.4%) glutamine transport (0.2%) L-glutamine import across plasma membrane (0.2%)" "membrane (25.6%) outer membrane-bounded periplasmic space (25.5%) cell envelope (0.6%)" "ligand-gated monoatomic ion channel activity (25.6%) amino acid binding (0.2%) hydrolase activity (0.2%)" "IPR001638 (25.6%) IPR001320 (24.9%) IPR018313 (24.7%)" "Solute-binding protein family 3/N-terminal domain of MltF (25.6%) Ionotropic glutamate receptor, C-terminal (24.9%) Solute-binding protein family 3, conserved site (24.7%)" QKAQVPGFRPGMVPMSLVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.5%) GO:0043335 (16.5%) GO:0051083 (16.5%)" "GO:0003755 (16.5%) GO:0043022 (16.5%) GO:0044183 (16.5%)" "protein transport (16.5%) protein unfolding (16.5%) 'de novo' cotranslational protein folding (16.5%)" "peptidyl-prolyl cis-trans isomerase activity (16.5%) ribosome binding (16.5%) protein folding chaperone (16.5%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" LVEAWHEQLPQAEIIPISATSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0000028 (14.3%) "GO:0005829 (14.3%) GO:0005886 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%) GO:0043024 (14.3%)" ribosomal small subunit assembly (14.3%) "cytosol (14.3%) plasma membrane (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%) ribosomal small subunit binding (14.3%)" "IPR004044 (12.5%) IPR005225 (12.5%) IPR005662 (12.5%)" "K Homology domain, type 2 (12.5%) Small GTP-binding domain (12.5%) GTPase Era-like (12.5%)" HKIINVLGSDNKLAE Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24%) GO:0030388 (24%) GO:0005975 (1.4%)" "GO:0008270 (25.3%) GO:0004332 (24%) GO:0016832 (1.4%)" "glycolytic process (24%) fructose 1,6-bisphosphate metabolic process (24%) carbohydrate metabolic process (1.4%)" "zinc ion binding (25.3%) fructose-bisphosphate aldolase activity (24%) aldehyde-lyase activity (1.4%)" "IPR000771 (25.3%) IPR013785 (25.3%) IPR050246 (25.3%)" "Fructose-bisphosphate aldolase, class-II (25.3%) Aldolase-type TIM barrel (25.3%) Class II Fructose-bisphosphate Aldolase (25.3%)" AAIDLNIPLITNAR Pseudomonadati Bacteria Pseudomonadati "6.3.5.5 (91.7%) 6.3.4.16 (8.3%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (91.7%) carbamoyl-phosphate synthase (ammonia) (8.3%)" "GO:0006541 (14.6%) GO:0006221 (9.7%) GO:0006526 (9.7%)" GO:0005737 (14.6%) "GO:0004088 (14.7%) GO:0005524 (14.6%) GO:0046872 (14.5%)" "glutamine metabolic process (14.6%) pyrimidine nucleotide biosynthetic process (9.7%) L-arginine biosynthetic process (9.7%)" cytoplasm (14.6%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14.7%) ATP binding (14.6%) metal ion binding (14.5%)" "IPR011607 (10.3%) IPR036914 (10.3%) IPR005479 (10.1%)" "Methylglyoxal synthase-like domain (10.3%) Methylglyoxal synthase-like domain superfamily (10.3%) Carbamoyl phosphate synthase, ATP-binding domain (10.1%)" VIGVGGGGGNAVNHMYK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0000917 (14.3%) GO:0043093 (14.3%) GO:0051258 (14.3%)" "GO:0005737 (14.3%) GO:0032153 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%)" "division septum assembly (14.3%) FtsZ-dependent cytokinesis (14.3%) protein polymerization (14.3%)" "cytoplasm (14.3%) cell division site (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%)" "IPR000158 (11.2%) IPR003008 (11.2%) IPR008280 (11.2%)" "Cell division protein FtsZ (11.2%) Tubulin/FtsZ, GTPase domain (11.2%) Tubulin/FtsZ, C-terminal (11.2%)" NIGAALQIDQANADKNIAQAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005886 (51.3%) GO:0045121 (48.7%)" "plasma membrane (51.3%) membrane raft (48.7%)" IPR022853 (100%) Flotillin-like protein FloA (100%) AKDKGVNLVLAVDAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" GTNKCTATVSPNFNSNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR025347 (100%) Protein of unknown function DUF4251 (100%) TFEINKPTEFTEGYSVTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" SLDIPELLHVGGEGLFVNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0045493 (2%) GO:0030313 (95.9%) GO:0016798 (2%) xylan catabolic process (2%) cell envelope (95.9%) hydrolase activity, acting on glycosyl bonds (2%) "IPR036941 (50%) IPR051648 (50%)" "Receptor L-domain superfamily (50%) Cell Wall Integrity and Assembly Regulator (50%)" AIAWEDFLDKDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.1.173 (100%) 23S rRNA (guanine(2445)-N(2))-methyltransferase (100%) "GO:0003723 (33.3%) GO:0070043 (33.3%) GO:0008990 (29.8%)" "RNA binding (33.3%) rRNA (guanine-N7-)-methyltransferase activity (33.3%) rRNA (guanine-N2-)-methyltransferase activity (29.8%)" "IPR004114 (17.9%) IPR054170 (17.9%) IPR000241 (16%)" "THUMP domain (17.9%) RlmL, ferredoxin-like domain (17.9%) Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain (16%)" LANQIYEEVKRPFR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR025669 (33.3%) IPR027417 (33.3%) IPR050678 (33.3%)" "AAA domain (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%) DNA Partitioning ATPase (33.3%)" FYPTGQKEPSVILECQKLPAPTPMEGQPR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR027823 (100%) Domain of unknown function DUF4468 with TBP-like fold (100%) ADPSVIATLELNFRR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" LEQATIEMLGTADKVTVSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (16.8%) GO:0009408 (0.3%) GO:0051085 (0.3%)" "GO:0005737 (15.8%) GO:1990220 (0.3%)" "GO:0005524 (16.8%) GO:0016853 (16.8%) GO:0140662 (16.8%)" "protein refolding (16.8%) response to heat (0.3%) obsolete chaperone cofactor-dependent protein refolding (0.3%)" "cytoplasm (15.8%) GroEL-GroES complex (0.3%)" "ATP binding (16.8%) isomerase activity (16.8%) ATP-dependent protein folding chaperone (16.8%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR027409 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) GroEL-like apical domain superfamily (16.7%)" FYQFWLNVSDADAER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.8%) GO:0005829 (16.8%) "GO:0003723 (16.8%) GO:0004831 (16.8%) GO:0005524 (16.8%)" tyrosyl-tRNA aminoacylation (16.8%) cytosol (16.8%) "RNA binding (16.8%) tyrosine-tRNA ligase activity (16.8%) ATP binding (16.8%)" "IPR001412 (12.5%) IPR002305 (12.5%) IPR002307 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Aminoacyl-tRNA synthetase, class Ic (12.5%) Tyrosine-tRNA ligase (12.5%)" GKTVAISGFGNVAWGAATK root "1.4.1.4 (82.6%) 1.4.1.2 (17.4%)" "glutamate dehydrogenase (NADP(+)) (82.6%) glutamate dehydrogenase (17.4%)" GO:0006537 (25.5%) GO:0005829 (25.5%) "GO:0004354 (25.5%) GO:0000166 (22.9%) GO:0004352 (0.5%)" glutamate biosynthetic process (25.5%) cytosol (25.5%) "glutamate dehydrogenase (NADP+) activity (25.5%) nucleotide binding (22.9%) glutamate dehydrogenase (NAD+) activity (0.5%)" "IPR006095 (11.4%) IPR006096 (11.4%) IPR036291 (11.4%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.4%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.4%) NAD(P)-binding domain superfamily (11.4%)" SLATAAGAVAGGVAGQGVQSAMNK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0009279 (100%) cell outer membrane (100%) "IPR008816 (50%) IPR051407 (50%)" "Glycine zipper 2TM domain (50%) Bacterial outer membrane lipoprotein and surface antigen (50%)" YTNPPLLLPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR041662 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like 2 (50%)" VAEVIDIPFCVAGGIK root "4.3.2.10 (97.7%) 4.1.3.- (2.2%) 4.2.1.19 (0.1%)" "imidazole glycerol-phosphate synthase (97.7%) Oxo-acid-lyases (2.2%) imidazoleglycerol-phosphate dehydratase (0.1%)" "GO:0000105 (25.2%) GO:0000162 (0%)" "GO:0005737 (24.4%) GO:0005829 (0%) GO:0009382 (0%)" "GO:0000107 (25.1%) GO:0016829 (25.1%) GO:0003949 (0%)" "L-histidine biosynthetic process (25.2%) L-tryptophan biosynthetic process (0%)" "cytoplasm (24.4%) cytosol (0%) imidazoleglycerol-phosphate synthase complex (0%)" "imidazoleglycerol-phosphate synthase activity (25.1%) lyase activity (25.1%) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity (0%)" "IPR006062 (20%) IPR011060 (20%) IPR013785 (20%)" "Histidine biosynthesis protein (20%) Ribulose-phosphate binding barrel (20%) Aldolase-type TIM barrel (20%)" YTGEGKEPELIKEDLNYQFVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (16.5%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (16.5%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" TGGYNQGGDRPYRPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (32.9%) "GO:0003723 (32.9%) GO:0120159 (32.9%) GO:0016829 (1.4%)" enzyme-directed rRNA pseudouridine synthesis (32.9%) "RNA binding (32.9%) rRNA pseudouridine synthase activity (32.9%) lyase activity (1.4%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" TAGPELALELEEKGYDWIKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016226 (0.5%) GO:1990229 (0.5%) "GO:0005524 (49.7%) GO:0016887 (49.2%)" iron-sulfur cluster assembly (0.5%) iron-sulfur cluster assembly complex (0.5%) "ATP binding (49.7%) ATP hydrolysis activity (49.2%)" "IPR010230 (25.3%) IPR027417 (25.3%) IPR003439 (25%)" "FeS cluster assembly SUF system, ATPase SufC (25.3%) P-loop containing nucleoside triphosphate hydrolase (25.3%) ABC transporter-like, ATP-binding domain (25%)" VKLENGAEILAHVSGK Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus GO:0005829 (24.5%) "GO:0003743 (26.5%) GO:0019843 (24.5%) GO:0043022 (24.5%)" cytosol (24.5%) "translation initiation factor activity (26.5%) rRNA binding (24.5%) ribosome binding (24.5%)" "IPR003029 (25%) IPR004368 (25%) IPR006196 (25%)" "S1 domain (25%) Translation initiation factor IF-1 (25%) RNA-binding domain, S1, IF1 type (25%)" TQTQLQQQHLENQINNNSQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae IPR020158 (100%) Protein of unknown function DUF2756 (100%) KNGFVGHEMILECR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" NMITGAAQMDGAILVVSASDGPMPQTR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0070125 (0.4%) "GO:0005829 (16%) GO:0032045 (6.6%) GO:0005737 (0.8%)" "GO:0003746 (17.9%) GO:0003924 (17.9%) GO:0005525 (17.9%)" mitochondrial translational elongation (0.4%) "cytosol (16%) guanyl-nucleotide exchange factor complex (6.6%) cytoplasm (0.8%)" "translation elongation factor activity (17.9%) GTPase activity (17.9%) GTP binding (17.9%)" "IPR000795 (8.6%) IPR027417 (8.6%) IPR050055 (8.6%)" "Translational (tr)-type GTP-binding domain (8.6%) P-loop containing nucleoside triphosphate hydrolase (8.6%) Elongation factor Tu GTPase (8.6%)" GKDIPEADRDYYLER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.3.5.1 (94.4%) 1.3.5.4 (5.6%)" "succinate dehydrogenase (94.4%) Transferred entry: 1.3.5.1 (5.6%)" GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (13.8%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (13.8%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" LIYALHACPHGVIGMSHDIEGLVETSTNLASIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" LIAELNDFLAKHDAEFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.4%) GO:0006002 (13.8%)" GO:0005829 (14.4%) "GO:0003872 (14.4%) GO:0005524 (14.4%) GO:0046872 (14.4%)" "response to glucose (14.4%) fructose 6-phosphate metabolic process (13.8%)" cytosol (14.4%) "6-phosphofructokinase activity (14.4%) ATP binding (14.4%) metal ion binding (14.4%)" "IPR000023 (25.3%) IPR011183 (25.3%) IPR035966 (25.3%)" "Phosphofructokinase domain (25.3%) Pyrophosphate-dependent phosphofructokinase PfpB (25.3%) Phosphofructokinase superfamily (25.3%)" HSHQQPAKPAAQPAA Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0010447 (0.8%) "GO:0042597 (98.3%) GO:0030288 (0.8%)" response to acidic pH (0.8%) "periplasmic space (98.3%) outer membrane-bounded periplasmic space (0.8%)" IPR023497 (100%) Acid shock protein (100%) YRHEYLMDETNANFEDKNGVVDYLGIWNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) LDNYHTEYDSATACGGSGR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0015891 (23.3%) GO:0006879 (0.2%) GO:0033214 (0.2%)" "GO:0009279 (26.4%) GO:0016020 (0.2%) GO:1902495 (0.2%)" "GO:0015344 (26.2%) GO:0038023 (23.3%)" "siderophore transport (23.3%) intracellular iron ion homeostasis (0.2%) siderophore-iron import into cell (0.2%)" "cell outer membrane (26.4%) membrane (0.2%) transmembrane transporter complex (0.2%)" "siderophore uptake transmembrane transporter activity (26.2%) signaling receptor activity (23.3%)" "IPR000531 (15.4%) IPR036942 (15.4%) IPR039426 (15.3%)" "TonB-dependent receptor-like, beta-barrel (15.4%) TonB-dependent receptor-like, beta-barrel domain superfamily (15.4%) TonB-dependent receptor-like (15.3%)" KATELTTPAERPSEYYGELVFNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (50%) GO:0004356 (50%) glutamine biosynthetic process (50%) glutamine synthetase activity (50%) "IPR008146 (14.3%) IPR008147 (14.3%) IPR014746 (14.3%)" "Glutamine synthetase, catalytic domain (14.3%) Glutamine synthetase, N-terminal domain (14.3%) Glutamine synthetase/guanido kinase, catalytic domain (14.3%)" GITEPTPTFSACFGAAFLSLHPTK root 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.7%) GO:0005829 (17.7%) "GO:0004612 (17.7%) GO:0005524 (17.7%) GO:0046872 (16.4%)" gluconeogenesis (17.7%) cytosol (17.7%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.7%) ATP binding (17.7%) metal ion binding (16.4%)" "IPR001272 (25.7%) IPR013035 (25.7%) IPR015994 (24.3%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.7%) Phosphoenolpyruvate carboxykinase, C-terminal (25.7%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (24.3%)" EHNAEVTGFIR root GO:0006414 (0.5%) "GO:0005737 (46.8%) GO:0005739 (0.5%) GO:0005829 (0.5%)" "GO:0003746 (49.8%) GO:0005085 (0.5%) GO:0008270 (0.5%)" translational elongation (0.5%) "cytoplasm (46.8%) mitochondrion (0.5%) cytosol (0.5%)" "translation elongation factor activity (49.8%) guanyl-nucleotide exchange factor activity (0.5%) zinc ion binding (0.5%)" "IPR001816 (20.6%) IPR014039 (20.6%) IPR036402 (20.6%)" "Translation elongation factor EFTs/EF1B (20.6%) Translation elongation factor EFTs/EF1B, dimerisation (20.6%) Elongation factor Ts, dimerisation domain superfamily (20.6%)" EAASSSYDNYTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "1.1.1.3 (50%) 2.7.2.4 (50%)" "homoserine dehydrogenase (50%) aspartate kinase (50%)" "GO:0009086 (11.1%) GO:0009088 (11.1%) GO:0009089 (11.1%)" "GO:0004072 (11.1%) GO:0004412 (11.1%) GO:0005524 (11.1%)" "methionine biosynthetic process (11.1%) threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%)" "aspartate kinase activity (11.1%) homoserine dehydrogenase activity (11.1%) ATP binding (11.1%)" "IPR001048 (7.1%) IPR001341 (7.1%) IPR001342 (7.1%)" "Aspartate/glutamate/uridylate kinase (7.1%) Aspartate kinase (7.1%) Homoserine dehydrogenase, catalytic (7.1%)" LIDLSFAEDIGDGDHTTLSCIPADAMGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.2.19 (100%) nicotinate-nucleotide diphosphorylase (carboxylating) (100%) "GO:0009435 (25%) GO:0034213 (25%)" GO:0005737 (25%) GO:0004514 (25%) "NAD+ biosynthetic process (25%) quinolinate catabolic process (25%)" cytoplasm (25%) nicotinate-nucleotide diphosphorylase (carboxylating) activity (25%) "IPR022412 (14.5%) IPR027277 (14.5%) IPR037128 (14.5%)" "Quinolinate phosphoribosyl transferase, N-terminal (14.5%) Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD (14.5%) Quinolinate phosphoribosyl transferase, N-terminal domain superfamily (14.5%)" ALILCSPSNPTGSVYSKEELAGLAAVLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.6.1.- (96.1%) 2.6.1.1 (3.9%)" "Transaminases (96.1%) aspartate transaminase (3.9%)" GO:0006520 (33.1%) "GO:0008483 (33.1%) GO:0030170 (33.1%) GO:0004069 (0.7%)" amino acid metabolic process (33.1%) "transaminase activity (33.1%) pyridoxal phosphate binding (33.1%) L-aspartate:2-oxoglutarate aminotransferase activity (0.7%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" AKKPDNWEIVGKPQSQEAYGCMLR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006865 (33.2%) GO:0015813 (0.1%) GO:0070778 (0.1%)" "GO:0005576 (33.2%) GO:0030288 (33.2%) GO:0016020 (0.1%)" "GO:0016595 (0.1%) GO:0070335 (0.1%)" "amino acid transport (33.2%) L-glutamate transmembrane transport (0.1%) L-aspartate transmembrane transport (0.1%)" "extracellular region (33.2%) outer membrane-bounded periplasmic space (33.2%) membrane (0.1%)" "glutamate binding (0.1%) aspartate binding (0.1%)" "IPR051455 (50.2%) IPR001638 (49.8%)" "Bacterial solute-binding protein 3 (50.2%) Solute-binding protein family 3/N-terminal domain of MltF (49.8%)" GALDWMTPFHDAIKPVVEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.86 (95.5%) 1.1.1.- (4.5%)" "ketol-acid reductoisomerase (NADP(+)) (95.5%) With NAD(+) or NADP(+) as acceptor (4.5%)" "GO:0009097 (20.4%) GO:0009099 (20.4%)" "GO:0004455 (20.4%) GO:0046872 (20.4%) GO:0016853 (18.6%)" "isoleucine biosynthetic process (20.4%) L-valine biosynthetic process (20.4%)" "ketol-acid reductoisomerase activity (20.4%) metal ion binding (20.4%) isomerase activity (18.6%)" "IPR000506 (16.9%) IPR008927 (16.9%) IPR013023 (16.9%)" "Ketol-acid reductoisomerase, C-terminal (16.9%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.9%) Ketol-acid reductoisomerase (16.9%)" IGQLNLPVTGEITTGQAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.21 (100%) beta-glucosidase (100%) GO:0009251 (33.5%) GO:0042597 (32%) "GO:0008422 (33.5%) GO:0016798 (0.5%) GO:0016787 (0.3%)" glucan catabolic process (33.5%) periplasmic space (32%) "beta-glucosidase activity (33.5%) hydrolase activity, acting on glycosyl bonds (0.5%) hydrolase activity (0.3%)" "IPR001764 (11.4%) IPR017853 (11.4%) IPR036962 (11.4%)" "Glycoside hydrolase, family 3, N-terminal (11.4%) Glycoside hydrolase superfamily (11.4%) Glycoside hydrolase, family 3, N-terminal domain superfamily (11.4%)" RFQDEEVQR root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0051301 (0.2%) GO:0006260 (0.1%) GO:0042026 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0005524 (25.9%) GO:0140662 (25.9%) GO:0051082 (24.5%)" "cell division (0.2%) DNA replication (0.1%) protein refolding (0.1%)" "cytosol (0.1%) cytoplasm (0%) plasma membrane (0%)" "ATP binding (25.9%) ATP-dependent protein folding chaperone (25.9%) unfolded protein binding (24.5%)" "IPR013126 (17.1%) IPR043129 (17.1%) IPR018181 (17.1%)" "Heat shock protein 70 family (17.1%) ATPase, nucleotide binding domain (17.1%) Heat shock protein 70, conserved site (17.1%)" FIPVFVTENMVGHK Pseudomonadati Bacteria Pseudomonadati "GO:0000028 (16.7%) GO:0006412 (16.7%)" "GO:0005737 (16.7%) GO:0015935 (16.6%) GO:0005840 (0.1%)" "GO:0003735 (16.7%) GO:0019843 (16.6%) GO:0003723 (0.1%)" "ribosomal small subunit assembly (16.7%) translation (16.7%)" "cytoplasm (16.7%) small ribosomal subunit (16.6%) ribosome (0.1%)" "structural constituent of ribosome (16.7%) rRNA binding (16.6%) RNA binding (0.1%)" "IPR002222 (25.5%) IPR005732 (25.4%) IPR023575 (25.4%)" "Small ribosomal subunit protein uS19 (25.5%) Small ribosomal subunit protein uS19, bacteria (25.4%) Small ribosomal subunit protein uS19, superfamily (25.4%)" AGDADGQLAGAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0008959 (51.7%) GO:0016407 (48.3%)" "phosphate acetyltransferase activity (51.7%) acetyltransferase activity (48.3%)" "IPR002505 (17%) IPR004614 (17%) IPR050500 (17%)" "Phosphate acetyl/butaryl transferase (17%) Phosphate acetyltransferase (17%) Phosphate Acetyltransferase/Butyryltransferase (17%)" GNVHVAYQGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016787 (100%) hydrolase activity (100%) "IPR001466 (20.2%) IPR012338 (20.2%) IPR050491 (20.2%)" "Beta-lactamase-related (20.2%) Beta-lactamase/transpeptidase-like (20.2%) Beta-lactamase AmpC-like (20.2%)" YVTTGAYLAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.99.- (100%) With other acceptors (100%) "GO:0050660 (50%) GO:0003995 (48.1%) GO:0016937 (1.9%)" "flavin adenine dinucleotide binding (50%) acyl-CoA dehydrogenase activity (48.1%) short-chain fatty acyl-CoA dehydrogenase activity (1.9%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009075 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.1%)" VHATKGDTELR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005524 (100%) ATP binding (100%) "IPR012547 (50%) IPR018631 (50%)" "PD-(D/E)XK nuclease superfamily 9 (50%) AAA-ATPase-like domain (50%)" IGASAVILSPIASK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "6.3.1.21 (84.8%) 2.1.2.- (15.2%)" "phosphoribosylglycinamide formyltransferase 2 (84.8%) Hydroxymethyl-, formyl- and related transferases (15.2%)" GO:0006189 (16.6%) GO:0005829 (16.6%) "GO:0000287 (16.6%) GO:0004644 (16.6%) GO:0005524 (16.6%)" 'de novo' IMP biosynthetic process (16.6%) cytosol (16.6%) "magnesium ion binding (16.6%) phosphoribosylglycinamide formyltransferase activity (16.6%) ATP binding (16.6%)" "IPR003135 (12.5%) IPR005862 (12.5%) IPR011054 (12.5%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.5%) Formate-dependent phosphoribosylglycinamide formyltransferase (12.5%) Rudiment single hybrid motif (12.5%)" HPGESEYLQAVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.4.1.4 (81.3%) 1.4.1.2 (18.8%)" "glutamate dehydrogenase (NADP(+)) (81.3%) glutamate dehydrogenase (18.8%)" GO:0006537 (25.7%) GO:0005829 (25.7%) "GO:0004354 (25.7%) GO:0000166 (22.5%) GO:0004352 (0.4%)" glutamate biosynthetic process (25.7%) cytosol (25.7%) "glutamate dehydrogenase (NADP+) activity (25.7%) nucleotide binding (22.5%) glutamate dehydrogenase (NAD+) activity (0.4%)" "IPR046346 (11.5%) IPR006097 (11.4%) IPR050724 (11.4%)" "Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.4%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.4%)" TLQGIKNLSDEEAAAIIAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" GO:0005737 (16.7%) "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16.7%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" cytoplasm (16.7%) "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16.7%)" "IPR002226 (12.5%) IPR010582 (12.5%) IPR011614 (12.5%)" "Catalase haem-binding site (12.5%) Catalase immune-responsive domain (12.5%) Catalase core domain (12.5%)" DLMVDRYAYDKIIQAGGFTSVNTGGVPDANAIPIPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.3.99.1 (100%) Deleted entry (100%) "GO:0009060 (24.2%) GO:0022904 (24.2%)" "GO:0009055 (24.2%) GO:0051537 (24.2%) GO:0016491 (3%)" "aerobic respiration (24.2%) respiratory electron transport chain (24.2%)" "electron transfer activity (24.2%) 2 iron, 2 sulfur cluster binding (24.2%) oxidoreductase activity (3%)" "IPR006058 (14.3%) IPR009051 (14.3%) IPR012675 (14.3%)" "2Fe-2S ferredoxin, iron-sulphur binding site (14.3%) Alpha-helical ferredoxin (14.3%) Beta-grasp domain superfamily (14.3%)" YMAQGAVEYAK root "4.1.2.13 (99.3%) 4.1.2.- (0.7%)" "fructose-bisphosphate aldolase (99.3%) Aldehyde-lyases (0.7%)" "GO:0006096 (24.6%) GO:0030388 (24.6%) GO:0005975 (0.5%)" GO:0016020 (0.1%) "GO:0008270 (25.1%) GO:0004332 (24.7%) GO:0016832 (0.3%)" "glycolytic process (24.6%) fructose 1,6-bisphosphate metabolic process (24.6%) carbohydrate metabolic process (0.5%)" membrane (0.1%) "zinc ion binding (25.1%) fructose-bisphosphate aldolase activity (24.7%) aldehyde-lyase activity (0.3%)" "IPR000771 (25.1%) IPR013785 (25.1%) IPR050246 (25.1%)" "Fructose-bisphosphate aldolase, class-II (25.1%) Aldolase-type TIM barrel (25.1%) Class II Fructose-bisphosphate Aldolase (25.1%)" EAPIHLSNLNVVDPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR003256 (16.4%) IPR005824 (16.4%) IPR008991 (16.4%)" "Large ribosomal subunit protein uL24 (16.4%) KOW (16.4%) Translation protein SH3-like domain superfamily (16.4%)" KIVEDAHKEAESIIASSR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0033178 (50%) GO:0046961 (50%) proton-transporting two-sector ATPase complex, catalytic domain (50%) proton-transporting ATPase activity, rotational mechanism (50%) IPR002842 (100%) V-type ATPase subunit E (100%) VMALLDELSNIFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.7.2.4 (55.6%) 1.1.1.3 (44.4%)" "aspartate kinase (55.6%) homoserine dehydrogenase (44.4%)" "GO:0009086 (11.1%) GO:0009088 (11.1%) GO:0009089 (11.1%)" "GO:0004072 (11.1%) GO:0004412 (11.1%) GO:0005524 (11.1%)" "methionine biosynthetic process (11.1%) threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%)" "aspartate kinase activity (11.1%) homoserine dehydrogenase activity (11.1%) ATP binding (11.1%)" "IPR001048 (7.1%) IPR001341 (7.1%) IPR001342 (7.1%)" "Aspartate/glutamate/uridylate kinase (7.1%) Aspartate kinase (7.1%) Homoserine dehydrogenase, catalytic (7.1%)" ALLTNPDGTYTQR Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.-.-.- (50%) 1.1.1.131 (50%)" "Oxidoreductases (50%) mannuronate reductase (50%)" GO:0005975 (47.6%) "GO:0016616 (47.6%) GO:0051213 (4.8%)" carbohydrate metabolic process (47.6%) "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (47.6%) dioxygenase activity (4.8%)" "IPR002347 (27%) IPR036291 (27%) IPR020904 (23%)" "Short-chain dehydrogenase/reductase SDR (27%) NAD(P)-binding domain superfamily (27%) Short-chain dehydrogenase/reductase, conserved site (23%)" VTLIDGSFHPVDSDQLSFEIAAIQAFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" LQIDSVPESLDEVSRR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0034605 (19.7%) GO:0042026 (19.7%) GO:0006508 (0.7%)" GO:0005737 (19.7%) "GO:0005524 (19.7%) GO:0016887 (19.7%) GO:0008233 (0.7%)" "cellular response to heat (19.7%) protein refolding (19.7%) proteolysis (0.7%)" cytoplasm (19.7%) "ATP binding (19.7%) ATP hydrolysis activity (19.7%) peptidase activity (0.7%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" TWTSEHPNLYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25.1%) GO:0009341 (25.1%) "GO:0004565 (25.1%) GO:0030246 (24.6%)" lactose catabolic process (25.1%) beta-galactosidase complex (25.1%) "beta-galactosidase activity (25.1%) carbohydrate binding (24.6%)" "IPR006101 (7.2%) IPR006102 (7.2%) IPR006103 (7.2%)" "Glycoside hydrolase, family 2 (7.2%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.2%) Glycoside hydrolase family 2, catalytic domain (7.2%)" LGDNAAMCFIELVDYNENMLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (36.9%) IPR036373 (36.9%) IPR047859 (26.2%)" "Large ribosomal subunit protein bL17 (36.9%) Large ribosomal subunit protein bL17 superfamily (36.9%) Large ribosomal subunit protein bL17, conserved site (26.2%)" HSQVFSTAEDNQSAVTIHVIQGERK root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0051301 (0.2%) GO:0006260 (0.1%) GO:0042026 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0005524 (25.7%) GO:0140662 (25.7%) GO:0051082 (24.2%)" "cell division (0.2%) DNA replication (0.1%) protein refolding (0.1%)" "cytosol (0.1%) cytoplasm (0%) plasma membrane (0%)" "ATP binding (25.7%) ATP-dependent protein folding chaperone (25.7%) unfolded protein binding (24.2%)" "IPR013126 (17.1%) IPR029047 (17%) IPR029048 (16.7%)" "Heat shock protein 70 family (17.1%) Heat shock protein 70kD, peptide-binding domain superfamily (17%) Heat shock protein 70kD, C-terminal domain superfamily (16.7%)" VQVILECTEMKDSGMPGTSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0005737 (20%) GO:0005840 (20%) GO:1990904 (20%)" GO:0003735 (20%) translation (20%) "cytoplasm (20%) ribosome (20%) ribonucleoprotein complex (20%)" structural constituent of ribosome (20%) "IPR001705 (33.3%) IPR011332 (33.3%) IPR038584 (33.3%)" "Large ribosomal subunit protein bL33 (33.3%) Zinc-binding ribosomal protein (33.3%) Large ribosomal subunit protein bL33 superfamily (33.3%)" MEIILKEDVVNLGYKNDIVTVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000244 (14.3%) IPR009027 (14.3%) IPR020069 (14.3%)" "Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.3%) Large ribosomal subunit protein bL9, C-terminal (14.3%)" LTIAPALLKELAESEGTIER Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (25%)" GO:0005829 (25%) GO:0004801 (25%) "carbohydrate metabolic process (25%) pentose-phosphate shunt (25%)" cytosol (25%) transaldolase activity (25%) "IPR001585 (25.3%) IPR013785 (25.3%) IPR004730 (24.7%)" "Transaldolase/Fructose-6-phosphate aldolase (25.3%) Aldolase-type TIM barrel (25.3%) Transaldolase type 1 (24.7%)" LVSSAGTGHFYTTTK Pseudomonadati Bacteria Pseudomonadati "GO:0006412 (32.8%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (32.7%) GO:0005840 (0.8%) GO:0005737 (0.2%)" "GO:0003735 (32.9%) GO:0000049 (0.2%)" "translation (32.8%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (32.7%) ribosome (0.8%) cytoplasm (0.2%)" "structural constituent of ribosome (32.9%) tRNA binding (0.2%)" "IPR001705 (25.1%) IPR011332 (25.1%) IPR038584 (25.1%)" "Large ribosomal subunit protein bL33 (25.1%) Zinc-binding ribosomal protein (25.1%) Large ribosomal subunit protein bL33 superfamily (25.1%)" YKGSVENGAYK Bacteria Bacteria "GO:0034220 (19.2%) GO:0006811 (2.8%) GO:0006974 (0.3%)" "GO:0009279 (25.1%) GO:0046930 (25.1%) GO:0016020 (0.3%)" "GO:0015288 (25.1%) GO:0015075 (0.3%) GO:0042802 (0.3%)" "monoatomic ion transmembrane transport (19.2%) monoatomic ion transport (2.8%) DNA damage response (0.3%)" "cell outer membrane (25.1%) pore complex (25.1%) membrane (0.3%)" "porin activity (25.1%) monoatomic ion transmembrane transporter activity (0.3%) identical protein binding (0.3%)" "IPR000498 (13.6%) IPR002368 (13.6%) IPR011250 (13.6%)" "Outer membrane protein OmpA-like, transmembrane domain (13.6%) Outer membrane protein, OmpA (13.6%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (13.6%)" AVGDQLTCVFVDHGLLR Bacteria Bacteria 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0006529 (0.3%) "GO:0005829 (33%) GO:0005886 (0.1%)" "GO:0003921 (33%) GO:0005524 (33%) GO:0004066 (0.3%)" obsolete asparagine biosynthetic process (0.3%) "cytosol (33%) plasma membrane (0.1%)" "GMP synthase activity (33%) ATP binding (33%) asparagine synthase (glutamine-hydrolyzing) activity (0.3%)" "IPR014729 (12.8%) IPR025777 (12.8%) IPR017926 (12.7%)" "Rossmann-like alpha/beta/alpha sandwich fold (12.8%) GMP synthetase ATP pyrophosphatase domain (12.8%) Glutamine amidotransferase (12.7%)" LDGKPFLTFAAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" EVKDYVGDMLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (25.4%) GO:0009898 (25.4%) "GO:0003842 (25.4%) GO:0004657 (23.7%)" L-proline catabolic process to L-glutamate (25.4%) cytoplasmic side of plasma membrane (25.4%) "L-glutamate gamma-semialdehyde dehydrogenase activity (25.4%) proline dehydrogenase activity (23.7%)" "IPR015590 (14.4%) IPR016160 (14.4%) IPR016161 (14.4%)" "Aldehyde dehydrogenase domain (14.4%) Aldehyde dehydrogenase, cysteine active site (14.4%) Aldehyde/histidinol dehydrogenase (14.4%)" RGEYQYCSPNDHVNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.9%) GO:0006531 (24.9%)" GO:0005829 (24.9%) "GO:0008797 (24.9%) GO:0016853 (0.4%)" "tricarboxylic acid cycle (24.9%) aspartate metabolic process (24.9%)" cytosol (24.9%) "aspartate ammonia-lyase activity (24.9%) isomerase activity (0.4%)" "IPR000362 (13.5%) IPR008948 (13.5%) IPR018951 (13.5%)" "Fumarate lyase family (13.5%) L-Aspartase-like (13.5%) Fumarase C, C-terminal (13.5%)" TFDTAEHVEIFQNPDR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR015943 (58.3%) IPR031815 (41.7%)" "WD40/YVTN repeat-like-containing domain superfamily (58.3%) Protein of unknown function DUF5074 (41.7%)" STRGEVLAVGNGR root "GO:0051085 (2.5%) GO:0051301 (0.1%) GO:0006457 (0%)" "GO:0005737 (15.7%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0005524 (16.3%) GO:0044183 (16.3%) GO:0046872 (16.3%)" "obsolete chaperone cofactor-dependent protein refolding (2.5%) cell division (0.1%) protein folding (0%)" "cytoplasm (15.7%) cytosol (0%) membrane (0%)" "ATP binding (16.3%) protein folding chaperone (16.3%) metal ion binding (16.3%)" "IPR011032 (25.1%) IPR020818 (25.1%) IPR037124 (25.1%)" "GroES-like superfamily (25.1%) GroES chaperonin family (25.1%) GroES chaperonin superfamily (25.1%)" HIMAEEEDHEQDLQDYLNDIAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006879 (20%) GO:0005829 (20%) "GO:0004322 (20%) GO:0008199 (20%) GO:0020037 (20%)" intracellular iron ion homeostasis (20%) cytosol (20%) "ferroxidase activity (20%) ferric iron binding (20%) heme binding (20%)" "IPR008331 (16.9%) IPR009040 (16.9%) IPR009078 (16.9%)" "Ferritin/DPS domain (16.9%) Ferritin-like diiron domain (16.9%) Ferritin-like superfamily (16.9%)" IADELGLKVETVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0003677 (100%) DNA binding (100%) IAAANVPAFVSGK root "GO:0030261 (11.2%) GO:0006270 (11%) GO:0006351 (11%)" "GO:0005829 (11.2%) GO:1990103 (11%) GO:1990178 (11%)" "GO:0003677 (11.4%) GO:0030527 (11.2%) GO:0042802 (11%)" "chromosome condensation (11.2%) DNA replication initiation (11%) DNA-templated transcription (11%)" "cytosol (11.2%) DnaA-HU complex (11%) HU-DNA complex (11%)" "DNA binding (11.4%) structural constituent of chromatin (11.2%) identical protein binding (11%)" "IPR000119 (33.5%) IPR010992 (33.5%) IPR020816 (33%)" "Histone-like DNA-binding protein (33.5%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.5%) Histone-like DNA-binding protein, conserved site (33%)" FLDFESDAPNRAELVNNYDWMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.8%) GO:0005829 (16.8%) "GO:0003723 (16.8%) GO:0004831 (16.8%) GO:0005524 (16.8%)" tyrosyl-tRNA aminoacylation (16.8%) cytosol (16.8%) "RNA binding (16.8%) tyrosine-tRNA ligase activity (16.8%) ATP binding (16.8%)" "IPR001412 (12.5%) IPR002305 (12.5%) IPR002307 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Aminoacyl-tRNA synthetase, class Ic (12.5%) Tyrosine-tRNA ligase (12.5%)" TSLVIDDLIHDITR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003439 (25%) IPR003593 (25%) IPR017871 (25%)" "ABC transporter-like, ATP-binding domain (25%) AAA+ ATPase domain (25%) ABC transporter-like, conserved site (25%)" YKLELTNPSVNDVAEWIQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.5%) GO:0005829 (16.5%) "GO:0000049 (16.5%) GO:0000287 (16.5%) GO:0004824 (16.5%)" lysyl-tRNA aminoacylation (16.5%) cytosol (16.5%) "tRNA binding (16.5%) magnesium ion binding (16.5%) lysine-tRNA ligase activity (16.5%)" "IPR002313 (11.2%) IPR004364 (11.2%) IPR004365 (11.2%)" "Lysine-tRNA ligase, class II (11.2%) Aminoacyl-tRNA synthetase, class II (D/K/N) (11.2%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.2%)" EKKDRVDDALCATR root 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.3%) GO:0005737 (15.9%) "GO:0005524 (17.3%) GO:0140662 (17.3%) GO:0016853 (16.3%)" protein refolding (17.3%) cytoplasm (15.9%) "ATP binding (17.3%) ATP-dependent protein folding chaperone (17.3%) isomerase activity (16.3%)" "IPR001844 (16.9%) IPR002423 (16.9%) IPR018370 (16.6%)" "Chaperonin Cpn60/GroEL (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%) Chaperonin Cpn60, conserved site (16.6%)" CMVTGKPSACR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (19.8%)" "GO:0004827 (20%) GO:0005524 (20%) GO:0016874 (0.2%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (19.8%)" "proline-tRNA ligase activity (20%) ATP binding (20%) ligase activity (0.2%)" "IPR016061 (11.2%) IPR017449 (11.2%) IPR004154 (11.1%)" "Proline-tRNA ligase, class II, C-terminal (11.2%) Prolyl-tRNA synthetase, class II (11.2%) Anticodon-binding (11.1%)" ELVEVLAPLPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" MTDPIADYLTR Bacteria Bacteria GO:0006412 (16.8%) "GO:0005840 (16.8%) GO:1990904 (16.8%) GO:0005737 (16.3%)" "GO:0003735 (16.8%) GO:0019843 (16.5%)" translation (16.8%) "ribosome (16.8%) ribonucleoprotein complex (16.8%) cytoplasm (16.3%)" "structural constituent of ribosome (16.8%) rRNA binding (16.5%)" "IPR000630 (35.1%) IPR035987 (35.1%) IPR047863 (29.8%)" "Small ribosomal subunit protein uS8 (35.1%) Small ribosomal subunit protein uS8 superfamily (35.1%) Small ribosomal subunit protein uS8, conserved site (29.8%)" KEEAGFSNNAMAEAFK Proteus mirabilis Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Morganellaceae Proteus Proteus mirabilis GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000110 (20%) IPR003029 (20%) IPR012340 (20%)" "Small ribosomal subunit protein bS1 (20%) S1 domain (20%) Nucleic acid-binding, OB-fold (20%)" SKGFAFAEMPNAAEAQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003723 (100%) RNA binding (100%) "IPR000504 (25%) IPR012677 (25%) IPR035979 (25%)" "RNA recognition motif domain (25%) Nucleotide-binding alpha-beta plait domain superfamily (25%) RNA-binding domain superfamily (25%)" ATIAALGELRSPFDVAQNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006412 (17.9%) GO:0042254 (14.3%)" "GO:0015935 (17.9%) GO:0005737 (14.3%)" "GO:0003735 (17.9%) GO:0019843 (17.9%)" "translation (17.9%) ribosome biogenesis (14.3%)" "small ribosomal subunit (17.9%) cytoplasm (14.3%)" "structural constituent of ribosome (17.9%) rRNA binding (17.9%)" "IPR000851 (14.3%) IPR005324 (14.3%) IPR005712 (14.3%)" "Small ribosomal subunit protein uS5 (14.3%) Small ribosomal subunit protein uS5, C-terminal (14.3%) Small ribosomal subunit protein uS5, bacteria (14.3%)" ASSLYTVHTPVPAGHDYFDEGLFGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0030170 (33.3%) GO:0008184 (32.4%) GO:0004645 (0.9%)" carbohydrate metabolic process (33.3%) "pyridoxal phosphate binding (33.3%) glycogen phosphorylase activity (32.4%) 1,4-alpha-oligoglucan phosphorylase activity (0.9%)" "IPR011834 (25.2%) IPR052182 (25.2%) IPR024517 (25%)" "Alpha-glucan phosphorylase (25.2%) Glycogen_Maltodextrin_Phosphorylase (25.2%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" LAPEGTPVYYLDGNLSPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006629 (50%) "GO:0008081 (46.7%) GO:0008889 (3.3%)" lipid metabolic process (50%) "phosphoric diester hydrolase activity (46.7%) glycerophosphodiester phosphodiesterase activity (3.3%)" "IPR017946 (50%) IPR030395 (50%)" "PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily (50%) Glycerophosphodiester phosphodiesterase domain (50%)" VEGGQHLNVNVLRR root 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006950 (0.1%) "GO:0005829 (47.2%) GO:0005737 (0.1%)" "GO:0008861 (48.7%) GO:0016829 (3.6%) GO:0003824 (0.4%)" response to stress (0.1%) "cytosol (47.2%) cytoplasm (0.1%)" "formate C-acetyltransferase activity (48.7%) lyase activity (3.6%) catalytic activity (0.4%)" "IPR001150 (25.2%) IPR050244 (25.1%) IPR019777 (25%)" "Glycine radical domain (25.2%) Autonomous Glycyl Radical Cofactor (25.1%) Formate C-acetyltransferase glycine radical, conserved site (25%)" TIVMVTHNEEQAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) GO:0055085 (0.5%) "GO:0005886 (0.5%) GO:0016020 (0.5%)" "GO:0005524 (49.8%) GO:0016887 (48.4%) GO:0022857 (0.5%)" transmembrane transport (0.5%) "plasma membrane (0.5%) membrane (0.5%)" "ATP binding (49.8%) ATP hydrolysis activity (48.4%) transmembrane transporter activity (0.5%)" "IPR003439 (20%) IPR003593 (20%) IPR017871 (20%)" "ABC transporter-like, ATP-binding domain (20%) AAA+ ATPase domain (20%) ABC transporter-like, conserved site (20%)" SYGGIDLFMGGIGPDGHIAFNEPGSSLSSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.2%) GO:0006043 (14.2%) GO:0006046 (14.2%)" "GO:0005829 (13.8%) GO:0005737 (0.5%)" "GO:0004342 (14.2%) GO:0042802 (14.2%) GO:0016787 (0.2%)" "carbohydrate metabolic process (14.2%) glucosamine catabolic process (14.2%) N-acetylglucosamine catabolic process (14.2%)" "cytosol (13.8%) cytoplasm (0.5%)" "glucosamine-6-phosphate deaminase activity (14.2%) identical protein binding (14.2%) hydrolase activity (0.2%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" GVLPFCQDTGTAIIHGEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (21.6%) GO:0005829 (0.1%) "GO:0004333 (21.6%) GO:0046872 (21.6%) GO:0051539 (21.6%)" tricarboxylic acid cycle (21.6%) cytosol (0.1%) "fumarate hydratase activity (21.6%) metal ion binding (21.6%) 4 iron, 4 sulfur cluster binding (21.6%)" "IPR004646 (16.9%) IPR004647 (16.9%) IPR011167 (16.9%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.9%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.9%) Iron-dependent fumarate hydratase (16.9%)" ATCSYAVAWLKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0016740 (100%) transferase activity (100%) "IPR016181 (33.3%) IPR031165 (33.3%) IPR045057 (33.3%)" "Acyl-CoA N-acyltransferase (33.3%) Yjdj-type Gcn5-related N-acetyltransferase (33.3%) Gcn5-related N-acetyltransferase (33.3%)" ITDKEVQINIFEVK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (20.1%) GO:0022627 (20.1%) "GO:0003735 (20.1%) GO:0019843 (20.1%) GO:0003729 (19.6%)" translation (20.1%) cytosolic small ribosomal subunit (20.1%) "structural constituent of ribosome (20.1%) rRNA binding (20.1%) mRNA binding (19.6%)" "IPR001351 (11.1%) IPR004044 (11.1%) IPR004087 (11.1%)" "Small ribosomal subunit protein uS3, C-terminal (11.1%) K Homology domain, type 2 (11.1%) K Homology domain (11.1%)" QVMEEYGTVDSVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0003723 (100%) RNA binding (100%) "IPR000504 (27.4%) IPR012677 (27.4%) IPR035979 (27.4%)" "RNA recognition motif domain (27.4%) Nucleotide-binding alpha-beta plait domain superfamily (27.4%) RNA-binding domain superfamily (27.4%)" LIDETGVTPVINQIELHPLMQQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.1.1.274 (91.7%) 1.1.1.- (5%) 1.1.1.2 (1.7%)" "2,5-didehydrogluconate reductase (2-dehydro-D-gluconate-forming) (91.7%) With NAD(+) or NADP(+) as acceptor (5%) alcohol dehydrogenase (NADP(+)) (1.7%)" "GO:0019853 (49.4%) GO:0051596 (0.2%) GO:0034220 (0.1%)" "GO:0005829 (0.2%) GO:0005737 (0.1%)" "GO:0016616 (35%) GO:0050580 (14.5%) GO:0004032 (0.2%)" "L-ascorbic acid biosynthetic process (49.4%) methylglyoxal catabolic process (0.2%) monoatomic ion transmembrane transport (0.1%)" "cytosol (0.2%) cytoplasm (0.1%)" "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (35%) 2,5-didehydrogluconate reductase activity (14.5%) aldose reductase (NADPH) activity (0.2%)" "IPR018170 (23.8%) IPR020471 (23.8%) IPR023210 (23.8%)" "Aldo/keto reductase, conserved site (23.8%) Aldo-keto reductase (23.8%) NADP-dependent oxidoreductase domain (23.8%)" FVVEGDLRR root 2.4.-.- (100%) Glycosyltransferases (100%) "GO:0006412 (16.6%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0005829 (16.6%) GO:0015935 (16.6%) GO:0005840 (0.3%)" "GO:0003735 (16.7%) GO:0019843 (16.6%) GO:0000049 (16.4%)" "translation (16.6%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosol (16.6%) small ribosomal subunit (16.6%) ribosome (0.3%)" "structural constituent of ribosome (16.7%) rRNA binding (16.6%) tRNA binding (16.4%)" "IPR001892 (20%) IPR010979 (20%) IPR018269 (20%)" "Small ribosomal subunit protein uS13 (20%) Small ribosomal subunit protein uS13-like, H2TH (20%) Small ribosomal subunit protein uS13, conserved site (20%)" SADIRPGITLACTECK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0006412 (20%) "GO:0005737 (20%) GO:0005840 (20%) GO:1990904 (20%)" GO:0003735 (20%) translation (20%) "cytoplasm (20%) ribosome (20%) ribonucleoprotein complex (20%)" structural constituent of ribosome (20%) "IPR001705 (25%) IPR011332 (25%) IPR018264 (25%)" "Large ribosomal subunit protein bL33 (25%) Zinc-binding ribosomal protein (25%) Large ribosomal subunit protein bL33, conserved site (25%)" MFGTDENYDVIVNPDKGDFEIWR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006353 (19.6%) GO:0031564 (19.6%)" GO:0005829 (19.6%) "GO:0003700 (19.6%) GO:0003723 (19.6%) GO:0003746 (1.9%)" "DNA-templated transcription termination (19.6%) transcription antitermination (19.6%)" cytosol (19.6%) "DNA-binding transcription factor activity (19.6%) RNA binding (19.6%) translation elongation factor activity (1.9%)" "IPR013735 (12.5%) IPR030842 (12.5%) IPR036555 (12.5%)" "Transcription factor NusA, N-terminal (12.5%) Transcription factor NusA, prokaryotes (12.5%) NusA, N-terminal domain superfamily (12.5%)" AALCWMPEIAHLSR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.6 (100%) ribose-5-phosphate isomerase (100%) "GO:0009052 (33.3%) GO:0019316 (33.3%)" GO:0004751 (33.3%) "pentose-phosphate shunt, non-oxidative branch (33.3%) D-allose catabolic process (33.3%)" ribose-5-phosphate isomerase activity (33.3%) "IPR003500 (34.5%) IPR036569 (34.5%) IPR004785 (31%)" "Sugar-phosphate isomerase, RpiB/LacA/LacB family (34.5%) Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily (34.5%) Ribose 5-phosphate isomerase B (31%)" VSVHDIIHPQTGELLVAGGEEITEDIAKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" LTNKDYSEHGLGELLALYGSAYNVNIK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.9%) GO:0006044 (32.9%)" "GO:0004342 (32.9%) GO:0016853 (1.4%)" "carbohydrate metabolic process (32.9%) N-acetylglucosamine metabolic process (32.9%)" "glucosamine-6-phosphate deaminase activity (32.9%) isomerase activity (1.4%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" GSSDRYFQSDNAADKLVPEGIEGR root 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (20.3%) GO:0006177 (19.7%) GO:0006164 (0%)" "GO:0005737 (0%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0003938 (20.3%) GO:0046872 (20%) GO:0000166 (19.2%)" "GTP biosynthetic process (20.3%) GMP biosynthetic process (19.7%) purine nucleotide biosynthetic process (0%)" "cytoplasm (0%) cytosol (0%) plasma membrane (0%)" "IMP dehydrogenase activity (20.3%) metal ion binding (20%) nucleotide binding (19.2%)" "IPR001093 (17%) IPR005990 (17%) IPR013785 (17%)" "IMP dehydrogenase/GMP reductase (17%) Inosine-5'-monophosphate dehydrogenase (17%) Aldolase-type TIM barrel (17%)" AITNLGLAEAK Bacteria Bacteria GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" GFPIVLHGSSSVPQEEVETINKFGGALK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (21.7%) GO:0030388 (21.7%) GO:0005975 (4.3%)" "GO:0008270 (26.1%) GO:0004332 (21.7%) GO:0016832 (4.3%)" "glycolytic process (21.7%) fructose 1,6-bisphosphate metabolic process (21.7%) carbohydrate metabolic process (4.3%)" "zinc ion binding (26.1%) fructose-bisphosphate aldolase activity (21.7%) aldehyde-lyase activity (4.3%)" "IPR000771 (26.1%) IPR013785 (26.1%) IPR050246 (26.1%)" "Fructose-bisphosphate aldolase, class-II (26.1%) Aldolase-type TIM barrel (26.1%) Class II Fructose-bisphosphate Aldolase (26.1%)" GAAMGCSNPHPHGQIWANSFLPNEAEREDR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "2.7.7.12 (99.4%) 2.7.7.10 (0.6%)" "UDP-glucose--hexose-1-phosphate uridylyltransferase (99.4%) UTP--hexose-1-phosphate uridylyltransferase (0.6%)" GO:0033499 (24.9%) "GO:0005737 (24.9%) GO:0005829 (0.1%)" "GO:0008108 (24.9%) GO:0008270 (24.9%) GO:0016779 (0.3%)" galactose catabolic process via UDP-galactose, Leloir pathway (24.9%) "cytoplasm (24.9%) cytosol (0.1%)" "UDP-glucose:hexose-1-phosphate uridylyltransferase activity (24.9%) zinc ion binding (24.9%) nucleotidyltransferase activity (0.3%)" "IPR001937 (20.1%) IPR005849 (20.1%) IPR019779 (20.1%)" "Galactose-1-phosphate uridyl transferase, class I (20.1%) Galactose-1-phosphate uridyl transferase, N-terminal (20.1%) Galactose-1-phosphate uridyl transferase, class I His-active site (20.1%)" LSLMYPNSPAEYLFAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis ELLPDSWETWWKDPETR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.8%) GO:0005829 (16.8%) "GO:0004825 (16.8%) GO:0005524 (16.8%) GO:0000049 (16.4%)" methionyl-tRNA aminoacylation (16.8%) cytosol (16.8%) "methionine-tRNA ligase activity (16.8%) ATP binding (16.8%) tRNA binding (16.4%)" "IPR014758 (8.4%) IPR015413 (8.4%) IPR023458 (8.4%)" "Methionyl-tRNA synthetase (8.4%) Methionyl/Leucyl tRNA synthetase (8.4%) Methionine-tRNA ligase, type 1 (8.4%)" ASEANPDVYFAKVDIDQNPDLAAAAK Bifidobacterium adolescentis Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium adolescentis GO:0005829 (20%) "GO:0015035 (70%) GO:0047134 (10%)" cytosol (20%) "protein-disulfide reductase activity (70%) protein-disulfide reductase [NAD(P)H] activity (10%)" "IPR005746 (25.8%) IPR013766 (25.8%) IPR036249 (25.8%)" "Thioredoxin (25.8%) Thioredoxin domain (25.8%) Thioredoxin-like superfamily (25.8%)" NGFANLDKHIENMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.3 (100%) formate--tetrahydrofolate ligase (100%) GO:0035999 (33.3%) "GO:0004329 (33.3%) GO:0005524 (33.3%)" tetrahydrofolate interconversion (33.3%) "formate-tetrahydrofolate ligase activity (33.3%) ATP binding (33.3%)" "IPR000559 (33.3%) IPR020628 (33.3%) IPR027417 (33.3%)" "Formate-tetrahydrofolate ligase, FTHFS (33.3%) Formate-tetrahydrofolate ligase, FTHFS, conserved site (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" LLSFNNVIVTSHQAFFTK Bacteria Bacteria "1.1.1.28 (92.9%) 1.1.1.290 (7.1%)" "D-lactate dehydrogenase (92.9%) 4-phosphoerythronate dehydrogenase (7.1%)" "GO:0008720 (49.2%) GO:0051287 (49.2%) GO:0016787 (0.8%)" "D-lactate dehydrogenase (NAD+) activity (49.2%) NAD binding (49.2%) hydrolase activity (0.8%)" "IPR006139 (25%) IPR006140 (25%) IPR036291 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) NAD(P)-binding domain superfamily (25%)" QIASLGIYPAVDPLESTSR Bacteria Bacteria 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0045259 (23.2%) GO:0005886 (19.6%)" "GO:0005524 (23.2%) GO:0046933 (23.2%) GO:0016787 (8.9%)" "proton-transporting ATP synthase complex (23.2%) plasma membrane (19.6%)" "ATP binding (23.2%) proton-transporting ATP synthase activity, rotational mechanism (23.2%) hydrolase activity (8.9%)" "IPR000194 (10.7%) IPR020003 (10.7%) IPR024034 (10.7%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.7%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (10.7%) ATPase, F1/V1 complex, beta/alpha subunit, C-terminal (10.7%)" TIAMGSSDGLRR root "7.1.2.2 (95.1%) 3.6.3.14 (4.9%)" "H(+)-transporting two-sector ATPase (95.1%) Transferred entry: 7.1.2.2 (4.9%)" GO:0042777 (0%) "GO:0045259 (23.5%) GO:0005886 (22.8%) GO:0016020 (0%)" "GO:0005524 (23.5%) GO:0046933 (23.5%) GO:0016787 (4.6%)" proton motive force-driven plasma membrane ATP synthesis (0%) "proton-transporting ATP synthase complex (23.5%) plasma membrane (22.8%) membrane (0%)" "ATP binding (23.5%) proton-transporting ATP synthase activity, rotational mechanism (23.5%) hydrolase activity (4.6%)" "IPR004100 (10.9%) IPR036121 (10.9%) IPR050053 (10.9%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.9%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily (10.9%) ATPase alpha/beta chains (10.9%)" VLAPYSEDYHLGLWVTGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0009328 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) phenylalanine-tRNA ligase complex (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR005121 (7.8%) IPR005147 (7.8%) IPR009061 (7.8%)" "Ferrodoxin-fold anticodon-binding domain (7.8%) tRNA synthetase, B5-domain (7.8%) Putative DNA-binding domain superfamily (7.8%)" CDELAQIPNEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (33.5%) IPR051685 (33%) IPR019734 (30.3%)" "Tetratricopeptide-like helical domain superfamily (33.5%) Ycf3/AcsC/BcsC/TPR Multifunctional (33%) Tetratricopeptide repeat (30.3%)" AALANLFSELPSKEK root "GO:0008033 (20.2%) GO:0016226 (20%) GO:0009451 (18.9%)" "GO:0005737 (20%) GO:0005829 (0.2%)" "GO:0005542 (20%) GO:0008168 (0.4%)" "tRNA processing (20.2%) iron-sulfur cluster assembly (20%) RNA modification (18.9%)" "cytoplasm (20%) cytosol (0.2%)" "folic acid binding (20%) methyltransferase activity (0.4%)" "IPR045179 (17.2%) IPR017703 (17%) IPR029043 (16.9%)" "YgfZ/GcvT (17.2%) YgfZ/GCV conserved site (17%) Glycine cleavage T-protein/YgfZ, C-terminal (16.9%)" SALFVIDVMKENIAVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33%) "GO:0022627 (33%) GO:0005840 (0.9%)" GO:0003735 (33%) translation (33%) "cytosolic small ribosomal subunit (33%) ribosome (0.9%)" structural constituent of ribosome (33%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" VRPAMDVNTTETCPTCFGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.1.4.- (52.9%) 3.1.26.12 (29.4%) 3.1.26.- (11.8%)" "Phosphoric diester hydrolases (52.9%) ribonuclease E (29.4%) Endoribonucleases producing 5'-phosphomonoesters (11.8%)" GO:0006364 (17.1%) GO:0005737 (17.1%) "GO:0003723 (17.1%) GO:0046872 (16.8%) GO:0004540 (15.2%)" rRNA processing (17.1%) cytoplasm (17.1%) "RNA binding (17.1%) metal ion binding (16.8%) RNA nuclease activity (15.2%)" "IPR004659 (25.3%) IPR003029 (24.9%) IPR012340 (24.9%)" "Ribonuclease E/G (25.3%) S1 domain (24.9%) Nucleic acid-binding, OB-fold (24.9%)" NFKDVVIVASK Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" ILQVTNDDAIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.5.1.47 (100%) cysteine synthase (100%) "GO:0006535 (40%) GO:0019344 (1.5%)" GO:0005737 (16.9%) "GO:0004124 (40%) GO:0016740 (1.5%)" "cysteine biosynthetic process from serine (40%) cysteine biosynthetic process (1.5%)" cytoplasm (16.9%) "cysteine synthase activity (40%) transferase activity (1.5%)" "IPR001926 (17%) IPR036052 (17%) IPR050214 (17%)" "Tryptophan synthase beta chain-like, PALP domain (17%) Tryptophan synthase beta chain-like, PALP domain superfamily (17%) Cysteine synthase/Cystathionine beta-synthase (17%)" VIKEEEESFLR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0002161 (14.3%) GO:0004813 (14.3%) GO:0005524 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%) ATP binding (14.3%)" "IPR018164 (9.2%) IPR050058 (9.2%) IPR018162 (9.2%)" "Alanyl-tRNA synthetase, class IIc, N-terminal (9.2%) Alanine--tRNA ligase (9.2%) Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily (9.2%)" SLVTFIYVGKPTAEFR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0015031 (32.3%) GO:0005886 (33.8%) GO:0022857 (33.8%) protein transport (32.3%) plasma membrane (33.8%) transmembrane transporter activity (33.8%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) LMTDLPTVDITTFPKDKEGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) AQMNQFFHR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" NAYLLAIAPTSSTSIIAGTTAGTDPVMKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) GO:0009263 (25%) GO:0005971 (25%) "GO:0004748 (25%) GO:0005524 (25%)" deoxyribonucleotide biosynthetic process (25%) ribonucleoside-diphosphate reductase complex (25%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (25%) ATP binding (25%)" "IPR000788 (17%) IPR039718 (17%) IPR005144 (16.5%)" "Ribonucleotide reductase large subunit, C-terminal (17%) Ribonucleoside-diphosphate reductase large subunit (17%) ATP-cone domain (16.5%)" IHCSILAEDAIK root "GO:0016226 (25%) GO:0006879 (0.1%) GO:0044571 (0%)" "GO:0005737 (23%) GO:0005739 (0.7%) GO:0005759 (0.6%)" "GO:0005506 (25%) GO:0051536 (24.4%) GO:0051537 (0.7%)" "iron-sulfur cluster assembly (25%) intracellular iron ion homeostasis (0.1%) [2Fe-2S] cluster assembly (0%)" "cytoplasm (23%) mitochondrion (0.7%) mitochondrial matrix (0.6%)" "iron ion binding (25%) iron-sulfur cluster binding (24.4%) 2 iron, 2 sulfur cluster binding (0.7%)" "IPR002871 (50.1%) IPR011339 (49.2%) IPR000172 (0%)" "NIF system FeS cluster assembly, NifU, N-terminal (50.1%) Iron-sulfur cluster assembly scaffold protein IscU (49.2%) Glucose-methanol-choline oxidoreductase, N-terminal (0%)" AAAENRLDPIVGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0034605 (19.4%) GO:0006508 (11.1%)" GO:0005737 (19.4%) "GO:0005524 (19.4%) GO:0016887 (19.4%) GO:0008233 (11.1%)" "cellular response to heat (19.4%) proteolysis (11.1%)" cytoplasm (19.4%) "ATP binding (19.4%) ATP hydrolysis activity (19.4%) peptidase activity (11.1%)" "IPR004176 (8.9%) IPR027417 (8.9%) IPR036628 (8.9%)" "Clp, repeat (R) N-terminal domain (8.9%) P-loop containing nucleoside triphosphate hydrolase (8.9%) Clp, N-terminal domain superfamily (8.9%)" QLLQILYDAHPYEISDDALQSVR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae NDVSDSEKKATVELLNR root "1.16.-.- (98.9%) 1.16.3.1 (1.1%)" "Oxidizing metal ions (98.9%) ferroxidase (1.1%)" "GO:0006879 (14%) GO:0030261 (14%) GO:0006950 (0.2%)" "GO:0005737 (14%) GO:0009295 (13.5%) GO:0016020 (0.2%)" "GO:0008199 (14.6%) GO:0016722 (14.6%) GO:0003677 (14%)" "intracellular iron ion homeostasis (14%) chromosome condensation (14%) response to stress (0.2%)" "cytoplasm (14%) nucleoid (13.5%) membrane (0.2%)" "ferric iron binding (14.6%) oxidoreductase activity, acting on metal ions (14.6%) DNA binding (14%)" "IPR012347 (16.9%) IPR002177 (16.8%) IPR008331 (16.8%)" "Ferritin-like (16.9%) DNA-binding protein Dps (16.8%) Ferritin/DPS domain (16.8%)" MDQIPSKDSMPGSIYSDLAK Pseudomonadati Bacteria Pseudomonadati "3.6.3.14 (97.1%) 3.6.3.15 (2.9%)" "Transferred entry: 7.1.2.2 (97.1%) Transferred entry: 7.2.2.1 (2.9%)" "GO:0046034 (29.8%) GO:1902600 (29.8%) GO:0006811 (3.6%)" "GO:0005524 (33.3%) GO:0016787 (3.6%)" "ATP metabolic process (29.8%) proton transmembrane transport (29.8%) monoatomic ion transport (3.6%)" "ATP binding (33.3%) hydrolase activity (3.6%)" "IPR000194 (20.5%) IPR022879 (20.5%) IPR027417 (20.5%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.5%) V-type ATP synthase regulatory subunit B/beta (20.5%) P-loop containing nucleoside triphosphate hydrolase (20.5%)" TNTILQSAFFR Bacteria Bacteria "1.2.7.1 (78.7%) 1.2.7.- (16.9%) 1.2.1.51 (4.5%)" "pyruvate synthase (78.7%) With an iron-sulfur protein as acceptor (16.9%) pyruvate dehydrogenase (NADP(+)) (4.5%)" "GO:0006979 (14.7%) GO:0022900 (14.6%) GO:0044281 (12%)" "GO:0051539 (14.7%) GO:0005506 (14.6%) GO:0030976 (14.5%)" "response to oxidative stress (14.7%) electron transport chain (14.6%) small molecule metabolic process (12%)" "4 iron, 4 sulfur cluster binding (14.7%) iron ion binding (14.6%) thiamine pyrophosphate binding (14.5%)" "IPR050722 (7.8%) IPR002869 (7.7%) IPR011895 (7.7%)" "Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%) Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate-flavodoxin oxidoreductase (7.7%)" TQKDMDKLGMGLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.5%) GO:0005737 (18.2%) "GO:0003746 (20.5%) GO:0003924 (20.5%) GO:0005525 (20.5%)" ribosome disassembly (20.5%) cytoplasm (18.2%) "translation elongation factor activity (20.5%) GTPase activity (20.5%) GTP binding (20.5%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" FLEQQNQVLQTK Sarcopterygii Eukaryota Metazoa Chordata Craniata Sarcopterygii "GO:0045109 (12.8%) GO:0031424 (12.7%) GO:0051290 (1.6%)" "GO:0045095 (14.9%) GO:0005615 (12%) GO:0005737 (6.6%)" "GO:0030280 (12.9%) GO:0046982 (1.6%) GO:0030246 (1.6%)" "intermediate filament organization (12.8%) keratinization (12.7%) protein heterotetramerization (1.6%)" "keratin filament (14.9%) extracellular space (12%) cytoplasm (6.6%)" "structural constituent of skin epidermis (12.9%) protein heterodimerization activity (1.6%) carbohydrate binding (1.6%)" "IPR039008 (23.4%) IPR003054 (23.3%) IPR032444 (23.1%)" "Intermediate filament, rod domain (23.4%) Keratin, type II (23.3%) Keratin type II head (23.1%)" MEAEAGACEDKKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (50%) GO:0016491 (27.8%) GO:0004601 (18.5%)" "iron ion binding (50%) oxidoreductase activity (27.8%) peroxidase activity (18.5%)" "IPR003251 (12.5%) IPR009040 (12.5%) IPR009078 (12.5%)" "Rubrerythrin, diiron-binding domain (12.5%) Ferritin-like diiron domain (12.5%) Ferritin-like superfamily (12.5%)" AIAVQAYQTLGCAGMAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 6.3.2.4 (100%) D-alanine--D-alanine ligase (100%) "GO:0009252 (14.3%) GO:0008360 (14.2%) GO:0071555 (14%)" GO:0005829 (14.3%) "GO:0005524 (14.3%) GO:0008716 (14.3%) GO:0046872 (14.2%)" "peptidoglycan biosynthetic process (14.3%) regulation of cell shape (14.2%) cell wall organization (14%)" cytosol (14.3%) "ATP binding (14.3%) D-alanine-D-alanine ligase activity (14.3%) metal ion binding (14.2%)" "IPR011095 (14.8%) IPR000291 (14.7%) IPR011761 (14.7%)" "D-alanine--D-alanine ligase, C-terminal (14.8%) D-alanine--D-alanine ligase/VANA/B/C, conserved site (14.7%) ATP-grasp fold (14.7%)" SLADIGEALKTVLK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 6.2.1.5 (100%) succinate--CoA ligase (ADP-forming) (100%) "GO:0006099 (20%) GO:0006104 (0.2%)" "GO:0009361 (19.8%) GO:0005829 (0.4%) GO:0005737 (0.2%)" "GO:0004775 (20%) GO:0004776 (20%) GO:0000166 (17.9%)" "tricarboxylic acid cycle (20%) succinyl-CoA metabolic process (0.2%)" "succinate-CoA ligase complex (ADP-forming) (19.8%) cytosol (0.4%) cytoplasm (0.2%)" "succinate-CoA ligase (ADP-forming) activity (20%) succinate-CoA ligase (GDP-forming) activity (20%) nucleotide binding (17.9%)" "IPR016102 (14.9%) IPR017440 (14.9%) IPR005811 (14.8%)" "Succinyl-CoA synthetase-like (14.9%) ATP-citrate lyase/succinyl-CoA ligase, active site (14.9%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.8%)" NDEIASVCK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (12.6%) GO:0006261 (11.8%)" "GO:0005737 (12.6%) GO:0009330 (12.6%) GO:0005694 (12.2%)" "GO:0003677 (12.6%) GO:0005524 (12.6%) GO:0034335 (11.8%)" "DNA topological change (12.6%) DNA-templated DNA replication (11.8%)" "cytoplasm (12.6%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.6%) chromosome (12.2%)" "DNA binding (12.6%) ATP binding (12.6%) DNA negative supercoiling activity (11.8%)" "IPR006691 (12.7%) IPR035516 (12.7%) IPR050220 (12.7%)" "DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.7%) DNA gyrase/topoisomerase IV, subunit A, C-terminal (12.7%) Type II DNA Topoisomerases (12.7%)" TNFDTLLEAGCHFGHLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33%) "GO:0022627 (33%) GO:0005840 (1%)" GO:0003735 (33%) translation (33%) "cytosolic small ribosomal subunit (33%) ribosome (1%)" structural constituent of ribosome (33%) "IPR001865 (25.1%) IPR005706 (25.1%) IPR023591 (25.1%)" "Small ribosomal subunit protein uS2 (25.1%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.1%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.1%)" QVYLDEKIER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR011703 (25%) IPR027417 (25%) IPR041628 (25%)" "ATPase, AAA-3 (25%) P-loop containing nucleoside triphosphate hydrolase (25%) ChlI/MoxR, AAA lid domain (25%)" TLKEDILEGFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006355 (20%) GO:0000160 (0.1%)" "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" "regulation of DNA-templated transcription (20%) phosphorelay signal transduction system (0.1%)" "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (17.6%) IPR039420 (17.6%) IPR001867 (17.5%)" "Signal transduction response regulator, receiver domain (17.6%) Transcriptional regulatory protein WalR-like (17.6%) OmpR/PhoB-type DNA-binding domain (17.5%)" SYKHLCALRDEVIAMGVLPAISEWHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (38.9%) "GO:0016615 (22.2%) GO:0016616 (22.2%) GO:0030060 (16.7%)" malate metabolic process (38.9%) "malate dehydrogenase activity (22.2%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (22.2%) L-malate dehydrogenase (NAD+) activity (16.7%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" ITPAQLEAAITPK Bacteria Bacteria "2.6.1.- (96.6%) 2.6.1.1 (3%) 2.6.1.79 (0.3%)" "Transaminases (96.6%) aspartate transaminase (3%) glutamate--prephenate aminotransferase (0.3%)" GO:0006520 (33.1%) GO:0016020 (0.2%) "GO:0030170 (33.1%) GO:0008483 (31.2%) GO:0004069 (2.1%)" amino acid metabolic process (33.1%) membrane (0.2%) "pyridoxal phosphate binding (33.1%) transaminase activity (31.2%) L-aspartate:2-oxoglutarate aminotransferase activity (2.1%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" VGDILHNFEQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (15.4%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (15.4%)" "IPR001114 (14.7%) IPR027417 (14.7%) IPR033128 (14.7%)" "Adenylosuccinate synthetase (14.7%) P-loop containing nucleoside triphosphate hydrolase (14.7%) Adenylosuccinate synthase, active site (14.7%)" ACENDPGLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.1.1 (100%) alanine dehydrogenase (100%) GO:0042853 (25.3%) GO:0005886 (25.3%) "GO:0000286 (25.3%) GO:0000166 (24.1%)" L-alanine catabolic process (25.3%) plasma membrane (25.3%) "alanine dehydrogenase activity (25.3%) nucleotide binding (24.1%)" "IPR007698 (20%) IPR007886 (20%) IPR008141 (20%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (20%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (20%) Alanine dehydrogenase (20%)" MEHLAQIALEPVMNDDIKFYPPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (20%) GO:0005829 (20%) "GO:0002161 (20%) GO:0004832 (20%) GO:0005524 (20%)" valyl-tRNA aminoacylation (20%) cytosol (20%) "aminoacyl-tRNA deacylase activity (20%) valine-tRNA ligase activity (20%) ATP binding (20%)" "IPR001412 (9.1%) IPR002300 (9.1%) IPR002303 (9.1%)" "Aminoacyl-tRNA synthetase, class I, conserved site (9.1%) Aminoacyl-tRNA synthetase, class Ia (9.1%) Valine-tRNA ligase (9.1%)" LSDEVKAEWAK root 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) "GO:0006633 (27%) GO:0030497 (3.6%) GO:0006629 (2.2%)" "GO:0004316 (31.4%) GO:0051287 (30.7%) GO:0016491 (1.5%)" "fatty acid biosynthetic process (27%) fatty acid elongation (3.6%) lipid metabolic process (2.2%)" "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (31.4%) NAD binding (30.7%) oxidoreductase activity (1.5%)" "IPR002347 (17.6%) IPR020904 (17.6%) IPR036291 (17.6%)" "Short-chain dehydrogenase/reductase SDR (17.6%) Short-chain dehydrogenase/reductase, conserved site (17.6%) NAD(P)-binding domain superfamily (17.6%)" GQTAFVSSNTNFVMLNGQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR025347 (100%) Protein of unknown function DUF4251 (100%) TNNAALAQILVKDYSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (51.4%) IPR019734 (48.6%)" "Tetratricopeptide-like helical domain superfamily (51.4%) Tetratricopeptide repeat (48.6%)" DLQKIDEIVSPFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.2.5 (100%) glutamate formimidoyltransferase (100%) "GO:0019556 (18.2%) GO:0019557 (18.2%) GO:0006547 (2.3%)" GO:0005737 (20.5%) "GO:0005542 (20.5%) GO:0030409 (18.2%) GO:0016740 (2.3%)" "L-histidine catabolic process to glutamate and formamide (18.2%) L-histidine catabolic process to glutamate and formate (18.2%) L-histidine metabolic process (2.3%)" cytoplasm (20.5%) "folic acid binding (20.5%) glutamate formimidoyltransferase activity (18.2%) transferase activity (2.3%)" "IPR004227 (14.3%) IPR012886 (14.3%) IPR013802 (14.3%)" "Formiminotransferase catalytic domain (14.3%) Formiminotransferase, N-terminal subdomain (14.3%) Formiminotransferase, C-terminal subdomain (14.3%)" EETPAIQNQAASTTLGDIDALAALKEQLEGKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" LTPVDLSSIPYYSFVTGEFAGCK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (15.6%) GO:0032259 (11.1%)" "GO:0005829 (15.6%) GO:0005960 (15.6%)" "GO:0004047 (15.6%) GO:0008483 (15.6%) GO:0008168 (11.1%)" "glycine decarboxylation via glycine cleavage system (15.6%) methylation (11.1%)" "cytosol (15.6%) glycine cleavage complex (15.6%)" "aminomethyltransferase activity (15.6%) transaminase activity (15.6%) methyltransferase activity (11.1%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" FLNDMFDKELIAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.5%) GO:0005737 (18.8%) "GO:0004816 (20.5%) GO:0005524 (20.5%) GO:0003676 (19.7%)" asparaginyl-tRNA aminoacylation (20.5%) cytoplasm (18.8%) "asparagine-tRNA ligase activity (20.5%) ATP binding (20.5%) nucleic acid binding (19.7%)" "IPR002312 (14.5%) IPR004364 (14.5%) IPR004522 (14.5%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.5%) Aminoacyl-tRNA synthetase, class II (D/K/N) (14.5%) Asparagine-tRNA ligase (14.5%)" AIEEPLRQIVANAGK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.6%) GO:0005737 (15.6%) "GO:0005524 (17.6%) GO:0140662 (17.6%) GO:0016853 (16%)" protein refolding (17.6%) cytoplasm (15.6%) "ATP binding (17.6%) ATP-dependent protein folding chaperone (17.6%) isomerase activity (16%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR027413 (16.7%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like equatorial domain superfamily (16.7%)" FEQENERRPSPEELADELDIPVDKISDTLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006352 (33.3%) "GO:0003677 (33.3%) GO:0016987 (33.3%)" DNA-templated transcription initiation (33.3%) "DNA binding (33.3%) sigma factor activity (33.3%)" "IPR000943 (10%) IPR007624 (10%) IPR007627 (10%)" "RNA polymerase sigma-70 (10%) RNA polymerase sigma-70 region 3 (10%) RNA polymerase sigma-70 region 2 (10%)" VQVILECTEHKDSGMPGTSR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20%) "GO:0005840 (20.2%) GO:0005737 (20%) GO:1990904 (20%)" GO:0003735 (20%) translation (20%) "ribosome (20.2%) cytoplasm (20%) ribonucleoprotein complex (20%)" structural constituent of ribosome (20%) "IPR001705 (33.3%) IPR011332 (33.3%) IPR038584 (33.3%)" "Large ribosomal subunit protein bL33 (33.3%) Zinc-binding ribosomal protein (33.3%) Large ribosomal subunit protein bL33 superfamily (33.3%)" KYLDECGPANFFGIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (18.9%) GO:0009098 (18.9%) GO:0009099 (18.9%)" "GO:0004084 (17.6%) GO:0052654 (5.7%) GO:0052655 (5.7%)" "isoleucine biosynthetic process (18.9%) L-leucine biosynthetic process (18.9%) L-valine biosynthetic process (18.9%)" "branched-chain-amino-acid transaminase activity (17.6%) L-leucine-2-oxoglutarate transaminase activity (5.7%) L-valine-2-oxoglutarate transaminase activity (5.7%)" "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" LNIDQNPGTAPK root "GO:0045454 (33.1%) GO:0006353 (0.1%)" "GO:0005829 (33.1%) GO:0005737 (0.1%)" "GO:0015035 (33.2%) GO:0003723 (0.1%) GO:0004386 (0.1%)" "cell redox homeostasis (33.1%) DNA-templated transcription termination (0.1%)" "cytosol (33.1%) cytoplasm (0.1%)" "protein-disulfide reductase activity (33.2%) RNA binding (0.1%) helicase activity (0.1%)" "IPR013766 (25%) IPR036249 (25%) IPR005746 (24.8%)" "Thioredoxin domain (25%) Thioredoxin-like superfamily (25%) Thioredoxin (24.8%)" VDEAADALKQIAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (32.7%) "GO:0022627 (32.7%) GO:0005840 (1.9%)" GO:0003735 (32.7%) translation (32.7%) "cytosolic small ribosomal subunit (32.7%) ribosome (1.9%)" structural constituent of ribosome (32.7%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" GTPTQPGVESPYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.18 (100%) glutamine--tRNA ligase (100%) "GO:0006425 (24.8%) GO:0006424 (0.5%)" GO:0005829 (24.8%) "GO:0004819 (24.8%) GO:0005524 (24.8%) GO:0016874 (0.5%)" "glutaminyl-tRNA aminoacylation (24.8%) glutamyl-tRNA aminoacylation (0.5%)" cytosol (24.8%) "glutamine-tRNA ligase activity (24.8%) ATP binding (24.8%) ligase activity (0.5%)" "IPR014729 (10.2%) IPR020058 (10.2%) IPR050132 (10.2%)" "Rossmann-like alpha/beta/alpha sandwich fold (10.2%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (10.2%) Glutamine/Glutamate--tRNA Ligase (10.2%)" ATDLYWPIPVNEIQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (37.5%) IPR012944 (37.5%) IPR033985 (25%)" "Tetratricopeptide-like helical domain superfamily (37.5%) RagB/SusD domain (37.5%) SusD-like, N-terminal (25%)" SLEVIANSLAGFNHSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (19.8%) GO:0042274 (19.8%)" "GO:0015935 (19.8%) GO:0005840 (0.5%) GO:1990904 (0.2%)" "GO:0019843 (20%) GO:0003735 (19.8%) GO:0003723 (0.2%)" "translation (19.8%) ribosomal small subunit biogenesis (19.8%)" "small ribosomal subunit (19.8%) ribosome (0.5%) ribonucleoprotein complex (0.2%)" "rRNA binding (20%) structural constituent of ribosome (19.8%) RNA binding (0.2%)" "IPR002942 (16.8%) IPR036986 (16.8%) IPR001912 (16.6%)" "RNA-binding S4 domain (16.8%) RNA-binding S4 domain superfamily (16.8%) Small ribosomal subunit protein uS4, N-terminal (16.6%)" IALLFYADGEKR root "GO:0002181 (19.5%) GO:0006412 (0.4%) GO:0032543 (0.1%)" "GO:0015934 (19.9%) GO:0005762 (0.1%) GO:0005840 (0.1%)" "GO:0003735 (20%) GO:0016740 (20%) GO:0019843 (18.8%)" "cytoplasmic translation (19.5%) translation (0.4%) mitochondrial translation (0.1%)" "large ribosomal subunit (19.9%) mitochondrial large ribosomal subunit (0.1%) ribosome (0.1%)" "structural constituent of ribosome (20%) transferase activity (20%) rRNA binding (18.8%)" "IPR002171 (11.2%) IPR005880 (11.2%) IPR008991 (11.2%)" "Large ribosomal subunit protein uL2 (11.2%) Large ribosomal subunit protein uL2, bacteria/organella (11.2%) Translation protein SH3-like domain superfamily (11.2%)" IGDKVPEFLGTDQDGKEVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) "GO:0034599 (25%) GO:0045454 (25%)" GO:0005737 (25%) GO:0008379 (25%) "cellular response to oxidative stress (25%) cell redox homeostasis (25%)" cytoplasm (25%) thioredoxin peroxidase activity (25%) "IPR000866 (20%) IPR013766 (20%) IPR024706 (20%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (20%) Thioredoxin domain (20%) Peroxiredoxin, AhpC-type (20%)" QYGHFYLVDTTAMDAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" SQVGTLYGTLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006879 (25%) GO:0005737 (25%) "GO:0008198 (25%) GO:0051537 (25%)" intracellular iron ion homeostasis (25%) cytoplasm (25%) "ferrous iron binding (25%) 2 iron, 2 sulfur cluster binding (25%)" IEIADLLISPLVTADAVLTESERR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0043093 (32.8%) GO:0051301 (1.7%)" "GO:0009898 (32.8%) GO:0032153 (32.8%)" "FtsZ-dependent cytokinesis (32.8%) cell division (1.7%)" "cytoplasmic side of plasma membrane (32.8%) cell division site (32.8%)" "IPR003494 (25%) IPR020823 (25%) IPR043129 (25%)" "SHS2 domain inserted in FtsA (25%) Cell division protein FtsA (25%) ATPase, nucleotide binding domain (25%)" LLDYIKPDVVHVLYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003439 (25.2%) IPR010230 (25.2%) IPR027417 (25.2%)" "ABC transporter-like, ATP-binding domain (25.2%) FeS cluster assembly SUF system, ATPase SufC (25.2%) P-loop containing nucleoside triphosphate hydrolase (25.2%)" SMADKLAAEIIDAFNEQGGAYKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.5%) GO:0015935 (20.5%) "GO:0003735 (20.5%) GO:0019843 (20.5%) GO:0000049 (17.8%)" translation (20.5%) small ribosomal subunit (20.5%) "structural constituent of ribosome (20.5%) rRNA binding (20.5%) tRNA binding (17.8%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" GSGLGLMLCKDFVELHGGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.13.3 (100%) histidine kinase (100%) GO:0000155 (100%) phosphorelay sensor kinase activity (100%) "IPR001789 (14.5%) IPR003594 (14.5%) IPR004358 (14.5%)" "Signal transduction response regulator, receiver domain (14.5%) Histidine kinase/HSP90-like ATPase domain (14.5%) Signal transduction histidine kinase-related protein, C-terminal (14.5%)" GIPVGTLAIGK root "5.4.99.18 (86.9%) 4.1.1.21 (13%) 6.3.4.18 (0.1%)" "5-(carboxyamino)imidazole ribonucleotide mutase (86.9%) phosphoribosylaminoimidazole carboxylase (13%) 5-(carboxyamino)imidazole ribonucleotide synthase (0.1%)" GO:0006189 (39.1%) "GO:0005829 (0.2%) GO:0016020 (0%)" "GO:0034023 (37.8%) GO:0016829 (20.6%) GO:0016853 (1.2%)" 'de novo' IMP biosynthetic process (39.1%) "cytosol (0.2%) membrane (0%)" "5-(carboxyamino)imidazole ribonucleotide mutase activity (37.8%) lyase activity (20.6%) isomerase activity (1.2%)" "IPR000031 (33.4%) IPR024694 (33.3%) IPR033747 (32.8%)" "PurE domain (33.4%) PurE, prokaryotic type (33.3%) Class I PurE (32.8%)" GKIIGIDLGTTNSCVAVLEGNEPVVIANSEGKR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae "GO:0005737 (22.4%) GO:0070013 (3.2%)" "GO:0005524 (24.8%) GO:0051082 (24.8%) GO:0140662 (24.8%)" "cytoplasm (22.4%) intracellular organelle lumen (3.2%)" "ATP binding (24.8%) unfolded protein binding (24.8%) ATP-dependent protein folding chaperone (24.8%)" "IPR012725 (16.8%) IPR013126 (16.8%) IPR018181 (16.8%)" "Chaperone DnaK (16.8%) Heat shock protein 70 family (16.8%) Heat shock protein 70, conserved site (16.8%)" AGGEEKSEPYR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0004519 (55.6%) GO:0003824 (25.9%) GO:0004527 (18.5%)" "endonuclease activity (55.6%) catalytic activity (25.9%) exonuclease activity (18.5%)" "IPR005135 (50%) IPR036691 (50%)" "Endonuclease/exonuclease/phosphatase (50%) Endonuclease/exonuclease/phosphatase superfamily (50%)" IATFAALLNGEVEEMMNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004829 (16.7%) GO:0005524 (16.7%)" threonyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) threonine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" FKDTYGIVYTGATGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" YITDIMPAANTK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (42.6%) GO:0016616 (38.3%) GO:0016787 (14.9%)" "NAD binding (42.6%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (38.3%) hydrolase activity (14.9%)" "IPR006139 (33.3%) IPR006140 (33.3%) IPR036291 (33.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" KKDLGLMATTYGYVYVAQIAMGADQAQTLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (78.8%) 1.2.7.- (21.2%)" "pyruvate synthase (78.8%) With an iron-sulfur protein as acceptor (21.2%)" "GO:0006979 (14.8%) GO:0022900 (14.5%) GO:0044281 (12.1%)" "GO:0030976 (14.7%) GO:0005506 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.8%) electron transport chain (14.5%) small molecule metabolic process (12.1%)" "thiamine pyrophosphate binding (14.7%) iron ion binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR029061 (7.8%) IPR050722 (7.8%) IPR011766 (7.8%)" "Thiamin diphosphate-binding fold (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%) Thiamine pyrophosphate enzyme, TPP-binding (7.8%)" LFVAANNISGPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.115 (100%) UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (100%) GO:0016829 (100%) lyase activity (100%) "IPR003869 (25%) IPR020025 (25%) IPR036291 (25%)" "Polysaccharide biosynthesis protein, CapD-like domain (25%) UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (25%) NAD(P)-binding domain superfamily (25%)" HFYSLTQVPRPSGYLKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" TVIAEHLSSIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.17.4.2 (100%) ribonucleoside-triphosphate reductase (thioredoxin) (100%) "GO:0006260 (16.4%) GO:0009265 (16.4%)" GO:0031250 (16.4%) "GO:0004748 (16.4%) GO:0005524 (16.4%) GO:0008998 (16.4%)" "DNA replication (16.4%) 2'-deoxyribonucleotide biosynthetic process (16.4%)" anaerobic ribonucleoside-triphosphate reductase complex (16.4%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.4%) ATP binding (16.4%) ribonucleoside-triphosphate reductase (thioredoxin) activity (16.4%)" "IPR005144 (50%) IPR012833 (50%)" "ATP-cone domain (50%) Ribonucleoside-triphosphate reductase, anaerobic (50%)" ANPWQQFAETHNKGDRVEGK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (24.3%) GO:0000028 (0.3%) GO:0002181 (0.2%)" "GO:0022627 (24.1%) GO:0005840 (1%) GO:0005737 (0.2%)" "GO:0003729 (24.3%) GO:0003735 (24.3%) GO:0016491 (0.3%)" "translation (24.3%) ribosomal small subunit assembly (0.3%) cytoplasmic translation (0.2%)" "cytosolic small ribosomal subunit (24.1%) ribosome (1%) cytoplasm (0.2%)" "mRNA binding (24.3%) structural constituent of ribosome (24.3%) oxidoreductase activity (0.3%)" "IPR003029 (20.3%) IPR012340 (20.3%) IPR050437 (20.3%)" "S1 domain (20.3%) Nucleic acid-binding, OB-fold (20.3%) Small ribosomal subunit protein bS1-like (20.3%)" ENNKETLAQVFTDVR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "1.5.1.39 (60%) 1.5.1.38 (40%)" "FMN reductase [NAD(P)H] (60%) FMN reductase (NADPH) (40%)" "GO:0016491 (89.2%) GO:0008752 (6.8%) GO:0052873 (4.1%)" "oxidoreductase activity (89.2%) FMN reductase [NAD(P)H] activity (6.8%) FMN reductase (NADPH) activity (4.1%)" "IPR000415 (33.3%) IPR016446 (33.3%) IPR029479 (33.3%)" "Nitroreductase-like (33.3%) Flavin oxidoreductase Frp family (33.3%) Nitroreductase (33.3%)" MQVDVLDCLGCGNCADICPGFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (83.3%) 1.2.7.- (16.7%)" "pyruvate synthase (83.3%) With an iron-sulfur protein as acceptor (16.7%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (12.7%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (12.7%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" MNESLTYPQTLALTDRLDYLGAHQNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "7.1.1.- (98.5%) 1.6.5.11 (1.5%)" "Hydron translocation or charge separation linked to oxidoreductase reactions (98.5%) Transferred entry: 1.6.5.9 (1.5%)" "GO:0005886 (14.7%) GO:0030964 (14%) GO:0005737 (13.2%)" "GO:0008137 (14.7%) GO:0048038 (14.7%) GO:0051287 (14.7%)" "plasma membrane (14.7%) NADH dehydrogenase complex (14%) cytoplasm (13.2%)" "NADH dehydrogenase (ubiquinone) activity (14.7%) quinone binding (14.7%) NAD binding (14.7%)" "IPR001135 (14.4%) IPR001268 (14.4%) IPR022885 (14.4%)" "NADH-quinone oxidoreductase, subunit D (14.4%) NADH:ubiquinone oxidoreductase, 30kDa subunit (14.4%) NAD(P)H-quinone oxidoreductase subunit D/H (14.4%)" SYDEDGNKHYDFQFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (19.4%) GO:0009263 (13.9%)" "GO:0004748 (22.2%) GO:0031419 (22.2%) GO:0005524 (13.9%)" "DNA biosynthetic process (19.4%) deoxyribonucleotide biosynthetic process (13.9%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (22.2%) cobalamin binding (22.2%) ATP binding (13.9%)" "IPR000788 (27.6%) IPR013344 (27.6%) IPR050862 (27.6%)" "Ribonucleotide reductase large subunit, C-terminal (27.6%) Ribonucleotide reductase, adenosylcobalamin-dependent (27.6%) Ribonucleoside diphosphate reductase class-2 (27.6%)" MYPVPADVRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.1.3.1 (61.5%) 6.4.1.1 (34.6%) 4.1.1.112 (3.8%)" "methylmalonyl-CoA carboxytransferase (61.5%) pyruvate carboxylase (34.6%) oxaloacetate decarboxylase (3.8%)" GO:0006094 (18.7%) GO:0005737 (18.7%) "GO:0003824 (32.4%) GO:0004736 (20.7%) GO:0047154 (7.9%)" gluconeogenesis (18.7%) cytoplasm (18.7%) "catalytic activity (32.4%) pyruvate carboxylase activity (20.7%) methylmalonyl-CoA carboxytransferase activity (7.9%)" "IPR013785 (24.3%) IPR000891 (24.1%) IPR003379 (23.9%)" "Aldolase-type TIM barrel (24.3%) Pyruvate carboxyltransferase (24.1%) Carboxylase, conserved domain (23.9%)" MVMTSSSSPGVSLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.1 (36.8%) 1.2.7.7 (26.3%) 1.2.7.3 (21.1%)" "pyruvate synthase (36.8%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) (26.3%) 2-oxoglutarate synthase (21.1%)" "GO:0016491 (79.6%) GO:0019164 (9.2%) GO:0043807 (8.2%)" "oxidoreductase activity (79.6%) pyruvate synthase activity (9.2%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity (8.2%)" "IPR002880 (20.1%) IPR029061 (20.1%) IPR052368 (20.1%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20.1%) Thiamin diphosphate-binding fold (20.1%) 2-oxoacid oxidoreductase subunit (20.1%)" QDPWETIEEKYPVGSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (24.8%) IPR012340 (24.8%) IPR035104 (24.8%)" "S1 domain (24.8%) Nucleic acid-binding, OB-fold (24.8%) Ribosomal protein S1-like (24.8%)" MGINPSTKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0030261 (24.7%) GO:0005829 (24.7%) "GO:0003677 (25.9%) GO:0030527 (24.7%)" chromosome condensation (24.7%) cytosol (24.7%) "DNA binding (25.9%) structural constituent of chromatin (24.7%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" HQSQAESAPYLGDDERLFWQR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.7%) GO:0006044 (32.7%)" "GO:0004342 (32.7%) GO:0016853 (2%)" "carbohydrate metabolic process (32.7%) N-acetylglucosamine metabolic process (32.7%)" "glucosamine-6-phosphate deaminase activity (32.7%) isomerase activity (2%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" AVLEGTGHDCEIAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.4.2.59 (100%) sulfide-dependent adenosine diphosphate thiazole synthase (100%) "GO:0009228 (19.7%) GO:0009229 (19.7%) GO:0052837 (19.7%)" "GO:0005506 (19.7%) GO:0016763 (19.7%) GO:0016853 (1.3%)" "thiamine biosynthetic process (19.7%) thiamine diphosphate biosynthetic process (19.7%) thiazole biosynthetic process (19.7%)" "iron ion binding (19.7%) pentosyltransferase activity (19.7%) isomerase activity (1.3%)" "IPR002922 (33.3%) IPR022828 (33.3%) IPR036188 (33.3%)" "Thiazole biosynthetic enzyme Thi4 family (33.3%) Thiazole biosynthetic enzyme, prokaryotic (33.3%) FAD/NAD(P)-binding domain superfamily (33.3%)" ALIEAEIEQQKK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.3%) "GO:0022627 (22.8%) GO:0005840 (1.7%) GO:1990904 (1.5%)" "GO:0003729 (24.3%) GO:0003735 (24.3%) GO:0004654 (0.2%)" translation (24.3%) "cytosolic small ribosomal subunit (22.8%) ribosome (1.7%) ribonucleoprotein complex (1.5%)" "mRNA binding (24.3%) structural constituent of ribosome (24.3%) polyribonucleotide nucleotidyltransferase activity (0.2%)" "IPR003029 (24.9%) IPR012340 (24.9%) IPR035104 (24.9%)" "S1 domain (24.9%) Nucleic acid-binding, OB-fold (24.9%) Ribosomal protein S1-like (24.9%)" GGSISGGGYGSGGGK Homininae Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Euarchontoglires Primates Haplorrhini Simiiformes Hominoidea Hominidae Homininae "GO:0031424 (6.6%) GO:0045109 (6.6%) GO:0003334 (4.9%)" "GO:0005829 (13.1%) GO:0045095 (9.8%) GO:0001533 (4.9%)" "GO:0030280 (6.6%) GO:0008092 (4.9%) GO:0005200 (1.6%)" "keratinization (6.6%) intermediate filament organization (6.6%) keratinocyte development (4.9%)" "cytosol (13.1%) keratin filament (9.8%) cornified envelope (4.9%)" "structural constituent of skin epidermis (6.6%) cytoskeletal protein binding (4.9%) structural constituent of cytoskeleton (1.6%)" "IPR018039 (27.6%) IPR039008 (27.6%) IPR032444 (24.1%)" "Intermediate filament protein, conserved site (27.6%) Intermediate filament, rod domain (27.6%) Keratin type II head (24.1%)" LDTEKTFYEGMVTQLR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis QDFTQSCCNYLTNDTWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" HLVESLLIGLLSDGHVLLEGVPGLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR027417 (25.2%) IPR011703 (24.9%) IPR041628 (24.9%)" "P-loop containing nucleoside triphosphate hydrolase (25.2%) ATPase, AAA-3 (24.9%) ChlI/MoxR, AAA lid domain (24.9%)" DATSATTTTSLGGLFK root 3.5.4.16 (100%) GTP cyclohydrolase I (100%) "GO:0046654 (14.3%) GO:0006729 (14.2%) GO:0006730 (14.2%)" "GO:0005737 (14.2%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003934 (14.3%) GO:0005525 (14.2%) GO:0008270 (14.2%)" "tetrahydrofolate biosynthetic process (14.3%) tetrahydrobiopterin biosynthetic process (14.2%) one-carbon metabolic process (14.2%)" "cytoplasm (14.2%) cytosol (0%) membrane (0%)" "GTP cyclohydrolase I activity (14.3%) GTP binding (14.2%) zinc ion binding (14.2%)" "IPR001474 (20%) IPR020602 (20%) IPR043133 (20%)" "GTP cyclohydrolase I (20%) GTP cyclohydrolase I domain (20%) GTP cyclohydrolase I, C-terminal/NADPH-dependent 7-cyano-7-deazaguanine reductase (20%)" TVAKVDEAAEVMK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" HWYLPLDKWEPFLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004825 (16.7%) GO:0005524 (16.7%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) methionine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR001412 (8.3%) IPR002547 (8.3%) IPR004495 (8.3%)" "Aminoacyl-tRNA synthetase, class I, conserved site (8.3%) tRNA-binding domain (8.3%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.3%)" HISDEEIVK root "5.4.2.11 (89.7%) 1.1.1.27 (3.4%) 2.7.13.3 (3.4%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (89.7%) L-lactate dehydrogenase (3.4%) histidine kinase (3.4%)" "GO:0006096 (19.7%) GO:0006094 (18.9%) GO:0006352 (9%)" "GO:0000932 (0.8%) GO:0005634 (0.8%) GO:0005737 (0.8%)" "GO:0004619 (18%) GO:0016987 (9%) GO:0003677 (8.2%)" "glycolytic process (19.7%) gluconeogenesis (18.9%) DNA-templated transcription initiation (9%)" "P-body (0.8%) nucleus (0.8%) cytoplasm (0.8%)" "phosphoglycerate mutase activity (18%) sigma factor activity (9%) DNA binding (8.2%)" "IPR005952 (10.6%) IPR013078 (10.6%) IPR029033 (10.6%)" "Phosphoglycerate mutase 1 (10.6%) Histidine phosphatase superfamily, clade-1 (10.6%) Histidine phosphatase superfamily (10.6%)" NKNVILIDDMVDTAGTITK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" ITPATQTTGIEGVKDLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.16 (100%) cysteine--tRNA ligase (100%) GO:0006423 (20%) GO:0005829 (20%) "GO:0004817 (20%) GO:0005524 (20%) GO:0008270 (20%)" cysteinyl-tRNA aminoacylation (20%) cytosol (20%) "cysteine-tRNA ligase activity (20%) ATP binding (20%) zinc ion binding (20%)" "IPR009080 (14.3%) IPR014729 (14.3%) IPR015273 (14.3%)" "Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (14.3%) Rossmann-like alpha/beta/alpha sandwich fold (14.3%) Cysteinyl-tRNA synthetase, class Ia, DALR (14.3%)" VAGDYDAVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.4.1.5 (100%) lactoylglutathione lyase (100%) GO:0019243 (18.6%) GO:0005737 (18.6%) "GO:0004462 (30.2%) GO:0016829 (20.9%) GO:0051213 (11.6%)" methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (18.6%) cytoplasm (18.6%) "lactoylglutathione lyase activity (30.2%) lyase activity (20.9%) dioxygenase activity (11.6%)" "IPR004360 (28.7%) IPR029068 (28.7%) IPR037523 (28.7%)" "Glyoxalase/fosfomycin resistance/dioxygenase domain (28.7%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (28.7%) Vicinal oxygen chelate (VOC), core domain (28.7%)" GTEEVPLEWGGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (24.9%) "GO:0003746 (25.4%) GO:0003924 (24.9%) GO:0005525 (24.9%)" ribosome disassembly (24.9%) "translation elongation factor activity (25.4%) GTPase activity (24.9%) GTP binding (24.9%)" "IPR000640 (7.5%) IPR000795 (7.5%) IPR005225 (7.5%)" "Elongation factor EFG, domain V-like (7.5%) Translational (tr)-type GTP-binding domain (7.5%) Small GTP-binding domain (7.5%)" ILGTVDELQEGGEELNVPYTVGETVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0006353 (20%) GO:0006354 (20%) GO:0031564 (20%)" GO:0005829 (20%) "DNA-templated transcription termination (20%) DNA-templated transcription elongation (20%) transcription antitermination (20%)" cytosol (20%) "IPR001062 (12.5%) IPR005824 (12.5%) IPR006645 (12.5%)" "Transcription antitermination protein, NusG (12.5%) KOW (12.5%) NusG-like, N-terminal (12.5%)" LGGSAFAQSLNK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (18.8%) GO:0006164 (1.8%)" GO:0005737 (20.6%) "GO:0004642 (20.6%) GO:0005524 (19.1%) GO:0046872 (19.1%)" "'de novo' IMP biosynthetic process (18.8%) purine nucleotide biosynthetic process (1.8%)" cytoplasm (20.6%) "phosphoribosylformylglycinamidine synthase activity (20.6%) ATP binding (19.1%) metal ion binding (19.1%)" "IPR010918 (11.5%) IPR036676 (11.5%) IPR036921 (11.5%)" "PurM-like, C-terminal domain (11.5%) PurM-like, C-terminal domain superfamily (11.5%) PurM-like, N-terminal domain superfamily (11.5%)" QIVGFIKDGCEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.95 (66.7%) 1.1.1.290 (24.2%) 1.1.1.81 (9.1%)" "phosphoglycerate dehydrogenase (66.7%) 4-phosphoerythronate dehydrogenase (24.2%) hydroxypyruvate reductase (9.1%)" GO:0006564 (0.4%) "GO:0051287 (49.6%) GO:0016616 (36.9%) GO:0004617 (9%)" L-serine biosynthetic process (0.4%) "NAD binding (49.6%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (36.9%) phosphoglycerate dehydrogenase activity (9%)" "IPR006140 (33.3%) IPR036291 (33.3%) IPR006139 (32.8%)" "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (32.8%)" IVAHGSAQALQANPDPR root "3.6.3.- (57.1%) 7.6.2.- (42.9%)" "Acting on acid anhydrides; catalyzing transmembrane movement of substances (57.1%) Linked to the hydrolysis of a nucleoside triphosphate (42.9%)" "GO:0006869 (29.6%) GO:0015914 (0.4%) GO:0120010 (0.4%)" "GO:0005886 (1.2%) GO:0016020 (0.4%) GO:1990531 (0.4%)" "GO:0005524 (34.4%) GO:0016887 (32%) GO:0016787 (0.8%)" "lipid transport (29.6%) phospholipid transport (0.4%) intermembrane phospholipid transfer (0.4%)" "plasma membrane (1.2%) membrane (0.4%) phospholipid-translocating ATPase complex (0.4%)" "ATP binding (34.4%) ATP hydrolysis activity (32%) hydrolase activity (0.8%)" "IPR027417 (25.7%) IPR003439 (25.4%) IPR003593 (24.5%)" "P-loop containing nucleoside triphosphate hydrolase (25.7%) ABC transporter-like, ATP-binding domain (25.4%) AAA+ ATPase domain (24.5%)" QRPYDIVAAPLDTPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (20%) IPR011053 (20%) IPR022615 (20%)" "Na(+)-translocating NADH-quinone reductase subunit A (20%) Single hybrid motif (20%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (20%)" GEEWLPSAPLHVLLYR root 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) GO:0005829 (16.7%) "GO:0004818 (16.7%) GO:0005524 (16.7%) GO:0000049 (16.6%)" glutamyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%) tRNA binding (16.6%)" "IPR020058 (9.8%) IPR049940 (9.8%) IPR014729 (9.8%)" "Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (9.8%) Glutamyl-Q tRNA(Asp) synthetase/Glutamate--tRNA ligase (9.8%) Rossmann-like alpha/beta/alpha sandwich fold (9.8%)" KLIGDDEHGWDDEGVFNYEGGCYAK Pseudomonadati Bacteria Pseudomonadati 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.4%) GO:0005829 (17.4%) "GO:0004612 (17.4%) GO:0005524 (17.4%) GO:0046872 (17%)" gluconeogenesis (17.4%) cytosol (17.4%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.4%) ATP binding (17.4%) metal ion binding (17%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" MKAEAEANAEADKK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0042026 (0.2%) GO:0051085 (0.2%)" GO:0005737 (0.3%) "GO:0005524 (33.2%) GO:0140662 (33.2%) GO:0051082 (32.5%)" "protein refolding (0.2%) obsolete chaperone cofactor-dependent protein refolding (0.2%)" cytoplasm (0.3%) "ATP binding (33.2%) ATP-dependent protein folding chaperone (33.2%) unfolded protein binding (32.5%)" "IPR013126 (16.8%) IPR029047 (16.8%) IPR029048 (16.8%)" "Heat shock protein 70 family (16.8%) Heat shock protein 70kD, peptide-binding domain superfamily (16.8%) Heat shock protein 70kD, C-terminal domain superfamily (16.8%)" GKISGTTERPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR004389 (35%) IPR005484 (35%) IPR057268 (30%)" "Large ribosomal subunit protein uL18, bacteria (35%) Large ribosomal subunit protein uL18, bacterial/plantae/animalia (35%) Large ribosomal subunit protein uL18 (30%)" LAIEGGCNAVASTFGILGSVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (50%) GO:0004332 (50%) glycolytic process (50%) fructose-bisphosphate aldolase activity (50%) "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" LKEPLNLPEAMTER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" YKQEDVACR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "6.3.4.14 (70%) 6.4.1.7 (30%)" "biotin carboxylase (70%) 2-oxoglutarate carboxylase (30%)" GO:2001295 (17.8%) "GO:0005524 (22.2%) GO:0046872 (22.2%) GO:0003989 (15.6%)" malonyl-CoA biosynthetic process (17.8%) "ATP binding (22.2%) metal ion binding (22.2%) acetyl-CoA carboxylase activity (15.6%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" QSFYENSTEDNDALLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) GO:0017004 (25.4%) GO:0030313 (25.4%) "GO:0016209 (23.9%) GO:0016491 (23.9%) GO:0004601 (1.4%)" cytochrome complex assembly (25.4%) cell envelope (25.4%) "antioxidant activity (23.9%) oxidoreductase activity (23.9%) peroxidase activity (1.4%)" "IPR000866 (16.7%) IPR013766 (16.7%) IPR017937 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Thioredoxin, conserved site (16.7%)" GNYDAYVDHCYDNSIFSNEANFNK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.14.- (100%) Dipeptidyl-peptidases and tripeptidyl-peptidases (100%) "GO:0006508 (25%) GO:0043171 (25%)" "GO:0008239 (25%) GO:0070009 (25%)" "proteolysis (25%) peptide catabolic process (25%)" "dipeptidyl-peptidase activity (25%) serine-type aminopeptidase activity (25%)" "IPR009003 (33.3%) IPR019500 (33.3%) IPR043504 (33.3%)" "Peptidase S1, PA clan (33.3%) Peptidase S46 (33.3%) Peptidase S1, PA clan, chymotrypsin-like fold (33.3%)" SKAYEAIVKGEPMPTPGIPESLNVLLHELR Bacteria Bacteria 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (8%) IPR007641 (8%) IPR015712 (8%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (8%) RNA polymerase Rpb2, domain 7 (8%) DNA-directed RNA polymerase, subunit 2 (8%)" VVFVNCIVGGAIDAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" GIADRFHFPGFMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.4.-.- (35.6%) 2.4.1.250 (28.9%) 2.4.1.21 (8.9%)" "Glycosyltransferases (35.6%) D-inositol-3-phosphate glycosyltransferase (28.9%) starch synthase (8.9%)" "GO:0016757 (61.4%) GO:0016758 (24.2%) GO:0102710 (8.5%)" "glycosyltransferase activity (61.4%) hexosyltransferase activity (24.2%) D-inositol-3-phosphate glycosyltransferase activity (8.5%)" "IPR001296 (34%) IPR050194 (32.7%) IPR028098 (32.5%)" "Glycosyl transferase, family 1 (34%) Glycosyltransferase group 1 (32.7%) Glycosyltransferase subfamily 4-like, N-terminal domain (32.5%)" NTGELESQLEMTK Escherichia coli Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli "2.5.1.56 (50%) 2.5.1.57 (33.3%) 1.2.4.1 (16.7%)" "N-acetylneuraminate synthase (50%) N-acylneuraminate-9-phosphate synthase (33.3%) pyruvate dehydrogenase (acetyl-transferring) (16.7%)" "GO:0016051 (29.7%) GO:0070085 (29.7%)" "GO:0047444 (29.7%) GO:0050462 (8.1%) GO:0004739 (2.7%)" "carbohydrate biosynthetic process (29.7%) obsolete glycosylation (29.7%)" "N-acylneuraminate-9-phosphate synthase activity (29.7%) N-acetylneuraminate synthase activity (8.1%) pyruvate dehydrogenase (acetyl-transferring) activity (2.7%)" "IPR013132 (15.9%) IPR013785 (15.9%) IPR051690 (15.9%)" "PseI/NeuA/B-like (15.9%) Aldolase-type TIM barrel (15.9%) PseI/Nans/NeuA/B acid synthases (15.9%)" DHTLFALVDGTVCFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001684 (50%) IPR018261 (50%)" "Large ribosomal subunit protein bL27 (50%) Large ribosomal subunit protein bL27, conserved site (50%)" YFPSSILQFIVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022627 (25%) "GO:0003723 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "RNA binding (25%) structural constituent of ribosome (25%)" "IPR000754 (20%) IPR014721 (20%) IPR020568 (20%)" "Small ribosomal subunit protein uS9 (20%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (20%) Ribosomal protein uS5 domain 2-type superfamily (20%)" IAVYSSLIK root 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006531 (20.5%) GO:0006099 (18.2%) GO:0006533 (0.1%)" "GO:0005829 (20.7%) GO:0005886 (0.4%) GO:0016020 (0.3%)" "GO:0008797 (20.5%) GO:0042802 (17.5%) GO:0008381 (0.4%)" "aspartate metabolic process (20.5%) tricarboxylic acid cycle (18.2%) L-aspartate catabolic process (0.1%)" "cytosol (20.7%) plasma membrane (0.4%) membrane (0.3%)" "aspartate ammonia-lyase activity (20.5%) identical protein binding (17.5%) mechanosensitive monoatomic ion channel activity (0.4%)" "IPR008948 (12.6%) IPR022761 (12.6%) IPR051546 (12.6%)" "L-Aspartase-like (12.6%) Fumarate lyase, N-terminal (12.6%) Class-II Aspartate Ammonia-Lyase (12.6%)" GFEGGQMPLYR root 2.7.7.48 (100%) RNA-directed RNA polymerase (100%) "GO:0006412 (25.3%) GO:0015031 (0%) GO:0002181 (0%)" "GO:0022625 (24.9%) GO:0015934 (0.3%) GO:0005840 (0.2%)" "GO:0003735 (25.3%) GO:0019843 (21.2%) GO:0003729 (2.3%)" "translation (25.3%) protein transport (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.9%) large ribosomal subunit (0.3%) ribosome (0.2%)" "structural constituent of ribosome (25.3%) rRNA binding (21.2%) mRNA binding (2.3%)" "IPR005749 (20.6%) IPR036227 (20.6%) IPR030878 (20.3%)" "Large ribosomal subunit protein uL15, bacteria (20.6%) Large ribosomal subunit protein uL15/eL18 superfamily (20.6%) Large ribosomal subunit protein uL15 (20.3%)" MHIPSVDKFWK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25.4%) IPR002933 (25.4%) IPR011650 (25.4%)" "Peptidase M20C, Xaa-His dipeptidase (25.4%) Peptidase M20 (25.4%) Peptidase M20, dimerisation domain (25.4%)" RNDVNPEITDRFEFFIGGR root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.5%) GO:0006418 (0%) GO:0034605 (0%)" "GO:0005829 (14.5%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0000049 (14.5%) GO:0004824 (14.5%) GO:0005524 (14.5%)" "lysyl-tRNA aminoacylation (14.5%) tRNA aminoacylation for protein translation (0%) cellular response to heat (0%)" "cytosol (14.5%) cytoplasm (0.1%) membrane (0%)" "tRNA binding (14.5%) lysine-tRNA ligase activity (14.5%) ATP binding (14.5%)" "IPR004364 (11.6%) IPR045864 (11.6%) IPR006195 (11.5%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (11.6%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.6%) Aminoacyl-tRNA synthetase, class II (11.5%)" VVYTPGEFCQYADR Bacteria Bacteria IPR032265 (100%) Protein of unknown function DUF4831 (100%) EVEIGGPSVNPVRR Pseudomonadati Bacteria Pseudomonadati "3.6.3.14 (95.5%) 3.6.3.15 (4.5%)" "Transferred entry: 7.1.2.2 (95.5%) Transferred entry: 7.2.2.1 (4.5%)" "GO:0046034 (29.4%) GO:1902600 (29.4%) GO:0006811 (3.7%)" "GO:0005524 (32.9%) GO:0016787 (4.6%)" "ATP metabolic process (29.4%) proton transmembrane transport (29.4%) monoatomic ion transport (3.7%)" "ATP binding (32.9%) hydrolase activity (4.6%)" "IPR022879 (20.5%) IPR027417 (20.5%) IPR000194 (20.4%)" "V-type ATP synthase regulatory subunit B/beta (20.5%) P-loop containing nucleoside triphosphate hydrolase (20.5%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.4%)" VLTDKVGKLEFPDALLKR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.3%) GO:0043335 (16.3%) GO:0051083 (16.3%)" "GO:0003755 (16.3%) GO:0043022 (16.3%) GO:0044183 (16.3%)" "protein transport (16.3%) protein unfolding (16.3%) 'de novo' cotranslational protein folding (16.3%)" "peptidyl-prolyl cis-trans isomerase activity (16.3%) ribosome binding (16.3%) protein folding chaperone (16.3%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" DGGVALMSNGFGEGEGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0000917 (14.3%) GO:0043093 (14.3%) GO:0051258 (14.3%)" "GO:0005737 (14.3%) GO:0032153 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%)" "division septum assembly (14.3%) FtsZ-dependent cytokinesis (14.3%) protein polymerization (14.3%)" "cytoplasm (14.3%) cell division site (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" FFDDPSTITEEEILR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0032790 (20.4%) GO:0006412 (1%)" GO:0005737 (19.4%) "GO:0005525 (20.4%) GO:0003746 (19.4%) GO:0003924 (19.4%)" "ribosome disassembly (20.4%) translation (1%)" cytoplasm (19.4%) "GTP binding (20.4%) translation elongation factor activity (19.4%) GTPase activity (19.4%)" "IPR027417 (6.5%) IPR000640 (6.2%) IPR000795 (6.2%)" "P-loop containing nucleoside triphosphate hydrolase (6.5%) Elongation factor EFG, domain V-like (6.2%) Translational (tr)-type GTP-binding domain (6.2%)" TVLIMELINNIAKK root "7.1.2.2 (98.9%) 3.6.3.14 (1.1%)" "H(+)-transporting two-sector ATPase (98.9%) Transferred entry: 7.1.2.2 (1.1%)" GO:0042776 (3.3%) "GO:0045259 (22.8%) GO:0005886 (17.1%) GO:0005739 (1.7%)" "GO:0005524 (22.8%) GO:0046933 (22.8%) GO:0016787 (5.7%)" proton motive force-driven mitochondrial ATP synthesis (3.3%) "proton-transporting ATP synthase complex (22.8%) plasma membrane (17.1%) mitochondrion (1.7%)" "ATP binding (22.8%) proton-transporting ATP synthase activity, rotational mechanism (22.8%) hydrolase activity (5.7%)" "IPR000194 (10.2%) IPR004100 (10.2%) IPR050053 (10.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.2%) ATPase alpha/beta chains (10.2%)" IQNAGTEVVEAK root "1.1.1.37 (99.7%) 1.3.1.83 (0.2%) 1.-.-.- (0%)" "malate dehydrogenase (99.7%) geranylgeranyl diphosphate reductase (0.2%) Oxidoreductases (0%)" "GO:0006099 (25.1%) GO:0006108 (22.7%) GO:0019752 (1.3%)" "GO:0005737 (19.6%) GO:0005739 (5.4%) GO:0009507 (0.1%)" "GO:0030060 (25.2%) GO:0016491 (0.1%) GO:0045550 (0.1%)" "tricarboxylic acid cycle (25.1%) malate metabolic process (22.7%) carboxylic acid metabolic process (1.3%)" "cytoplasm (19.6%) mitochondrion (5.4%) chloroplast (0.1%)" "L-malate dehydrogenase (NAD+) activity (25.2%) oxidoreductase activity (0.1%) geranylgeranyl reductase activity (0.1%)" "IPR022383 (14.3%) IPR015955 (14.2%) IPR001236 (13.9%)" "Lactate/malate dehydrogenase, C-terminal (14.3%) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (14.2%) Lactate/malate dehydrogenase, N-terminal (13.9%)" GTLNMPHNENNEHR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "7.1.1.- (65%) 1.6.5.3 (20%) 1.6.5.11 (15%)" "Hydron translocation or charge separation linked to oxidoreductase reactions (65%) Transferred entry: 7.1.1.2 (20%) Transferred entry: 1.6.5.9 (15%)" "GO:0016020 (11.1%) GO:0005886 (8.5%)" "GO:0048038 (19.6%) GO:0051539 (19.6%) GO:0016651 (11.1%)" "membrane (11.1%) plasma membrane (8.5%)" "quinone binding (19.6%) 4 iron, 4 sulfur cluster binding (19.6%) oxidoreductase activity, acting on NAD(P)H (11.1%)" "IPR010226 (33.3%) IPR017896 (33.3%) IPR017900 (33.3%)" "NADH-quinone oxidoreductase, chain I (33.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (33.3%) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (33.3%)" DMVDGAPSVVKEGLAKDEAESLKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.5%)" "GO:0003729 (24.9%) GO:0003735 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.5%)" "mRNA binding (24.9%) structural constituent of ribosome (24.9%)" "IPR000206 (20.1%) IPR013823 (20.1%) IPR014719 (20.1%)" "Large ribosomal subunit protein bL12 (20.1%) Large ribosomal subunit protein bL12, C-terminal (20.1%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20.1%)" ANAAGGVQGEGEQQKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0016020 (100%) membrane (100%) "IPR021280 (50%) IPR052724 (50%)" "Protein O-mannosyl-transferase TMEM260-like (50%) Glycosyltransferase 117 domain-containing protein (50%)" VINLDKESEPDIYNAIKR Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.8%) GO:0005829 (17.8%) "GO:0004612 (17.8%) GO:0005524 (17.8%) GO:0046872 (17%)" gluconeogenesis (17.8%) cytosol (17.8%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.8%) ATP binding (17.8%) metal ion binding (17%)" "IPR001272 (25.3%) IPR013035 (25.3%) IPR015994 (24.9%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.3%) Phosphoenolpyruvate carboxykinase, C-terminal (25.3%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (24.9%)" GVKVSSEDEALGIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) VISWYDNEWGYSNK Bacteria Bacteria "1.2.1.- (81.8%) 1.2.1.12 (18.2%)" "With NAD(+) or NADP(+) as acceptor (81.8%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (18.2%)" "GO:0006006 (23.3%) GO:0006096 (2.3%)" GO:0005737 (2.3%) "GO:0050661 (23.3%) GO:0051287 (23.3%) GO:0016620 (16.3%)" "glucose metabolic process (23.3%) glycolytic process (2.3%)" cytoplasm (2.3%) "NADP binding (23.3%) NAD binding (23.3%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (16.3%)" "IPR020829 (17.7%) IPR020831 (17.7%) IPR006424 (16.1%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.7%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.7%) Glyceraldehyde-3-phosphate dehydrogenase, type I (16.1%)" WLEVLGCGMVHPNVLR root 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) "GO:0006432 (16.6%) GO:0043039 (0%)" "GO:0005737 (16.6%) GO:0009328 (0%) GO:0005829 (0%)" "GO:0000049 (16.7%) GO:0005524 (16.7%) GO:0004826 (16.6%)" "phenylalanyl-tRNA aminoacylation (16.6%) tRNA aminoacylation (0%)" "cytoplasm (16.6%) phenylalanine-tRNA ligase complex (0%) cytosol (0%)" "tRNA binding (16.7%) ATP binding (16.7%) phenylalanine-tRNA ligase activity (16.6%)" "IPR002319 (14.5%) IPR045864 (14.5%) IPR006195 (14.5%)" "Phenylalanyl-tRNA synthetase (14.5%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.5%) Aminoacyl-tRNA synthetase, class II (14.5%)" SSIMNKDGNDTDDTSPTYK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0008270 (100%) zinc ion binding (100%) "IPR000962 (50%) IPR037187 (50%)" "Zinc finger, DksA/TraR C4-type (50%) DksA, N-terminal domain superfamily (50%)" MRYDIAIIGGGPAGYTAAER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (25%) GO:0005737 (25%) "GO:0004148 (25%) GO:0050660 (25%)" 2-oxoglutarate metabolic process (25%) cytoplasm (25%) "dihydrolipoyl dehydrogenase (NADH) activity (25%) flavin adenine dinucleotide binding (25%)" "IPR001100 (12.5%) IPR004099 (12.5%) IPR006258 (12.5%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (12.5%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.5%) Dihydrolipoamide dehydrogenase (12.5%)" NMITGAAQMDGGILVVAATDGPMPQTR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0070125 (1.1%) GO:0006414 (0%)" "GO:0005829 (15%) GO:0032045 (10.1%) GO:0005739 (1.1%)" "GO:0003746 (16.4%) GO:0003924 (16.2%) GO:0005525 (16.2%)" "mitochondrial translational elongation (1.1%) translational elongation (0%)" "cytosol (15%) guanyl-nucleotide exchange factor complex (10.1%) mitochondrion (1.1%)" "translation elongation factor activity (16.4%) GTPase activity (16.2%) GTP binding (16.2%)" "IPR000795 (9.2%) IPR050055 (9.2%) IPR027417 (9.2%)" "Translational (tr)-type GTP-binding domain (9.2%) Elongation factor Tu GTPase (9.2%) P-loop containing nucleoside triphosphate hydrolase (9.2%)" KQPSELIATGIAGIDLNNTLVTGQK Pseudomonadati Bacteria Pseudomonadati 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (23.7%) GO:1902600 (23.7%) GO:0006811 (10.5%)" "GO:0005524 (34.2%) GO:0016787 (7.9%)" "ATP metabolic process (23.7%) proton transmembrane transport (23.7%) monoatomic ion transport (10.5%)" "ATP binding (34.2%) hydrolase activity (7.9%)" "IPR000194 (21.4%) IPR022879 (21.4%) IPR027417 (21.4%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (21.4%) V-type ATP synthase regulatory subunit B/beta (21.4%) P-loop containing nucleoside triphosphate hydrolase (21.4%)" AGTHDSHGAPLGDAEIALTR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.2.1.1 (100%) transketolase (100%) "GO:0009052 (21.5%) GO:0006098 (3.6%) GO:0006310 (0.1%)" GO:0005829 (25.1%) "GO:0004802 (25.1%) GO:0046872 (23.9%) GO:0016740 (0.5%)" "pentose-phosphate shunt, non-oxidative branch (21.5%) pentose-phosphate shunt (3.6%) DNA recombination (0.1%)" cytosol (25.1%) "transketolase activity (25.1%) metal ion binding (23.9%) transferase activity (0.5%)" "IPR005474 (12.1%) IPR029061 (12.1%) IPR033247 (12.1%)" "Transketolase, N-terminal (12.1%) Thiamin diphosphate-binding fold (12.1%) Transketolase family (12.1%)" IAFTPDEEIGQGADHFDVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.11.4 (100%) tripeptide aminopeptidase (100%) "GO:0006508 (16.7%) GO:0043171 (16.7%)" GO:0005829 (16.7%) "GO:0008237 (16.7%) GO:0008270 (16.7%) GO:0045148 (16.7%)" "proteolysis (16.7%) peptide catabolic process (16.7%)" cytosol (16.7%) "metallopeptidase activity (16.7%) zinc ion binding (16.7%) tripeptide aminopeptidase activity (16.7%)" "IPR001261 (20%) IPR002933 (20%) IPR010161 (20%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%) Peptidase M20 (20%) Peptidase M20B, tripeptide aminopeptidase (20%)" SGQPAIEAGISQDDLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" QLEAAISDYFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.29 (98.1%) 2.3.1.50 (1.9%)" "glycine C-acetyltransferase (98.1%) serine C-palmitoyltransferase (1.9%)" "GO:0030148 (14.3%) GO:0019518 (14%) GO:0006567 (0.3%)" "GO:0005829 (14.3%) GO:0016020 (14.3%)" "GO:0008890 (14.3%) GO:0030170 (14.3%) GO:0004758 (7.9%)" "sphingolipid biosynthetic process (14.3%) L-threonine catabolic process to glycine (14%) L-threonine catabolic process (0.3%)" "cytosol (14.3%) membrane (14.3%)" "glycine C-acetyltransferase activity (14.3%) pyridoxal phosphate binding (14.3%) serine C-palmitoyltransferase activity (7.9%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" GVCETNAEGYLTTVVER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016740 (100%) transferase activity (100%) IPR029044 (100%) Nucleotide-diphospho-sugar transferases (100%) MLYPFTFKPILKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (32.4%) "GO:0004476 (32.4%) GO:0008270 (32.4%) GO:0016853 (2.7%)" carbohydrate metabolic process (32.4%) "mannose-6-phosphate isomerase activity (32.4%) zinc ion binding (32.4%) isomerase activity (2.7%)" "IPR011051 (18.3%) IPR014710 (18.3%) IPR014628 (16.9%)" "RmlC-like cupin domain superfamily (18.3%) RmlC-like jelly roll fold (18.3%) Mannose-6-phosphate isomerase, Firmicutes type, short form (16.9%)" QAGYLNPYILEER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.21.92 (100%) endopeptidase Clp (100%) GO:0006515 (16.6%) "GO:0005737 (16.6%) GO:0009368 (16.6%) GO:0016020 (0.4%)" "GO:0004176 (16.6%) GO:0004252 (16.6%) GO:0051117 (16.6%)" protein quality control for misfolded or incompletely synthesized proteins (16.6%) "cytoplasm (16.6%) endopeptidase Clp complex (16.6%) membrane (0.4%)" "ATP-dependent peptidase activity (16.6%) serine-type endopeptidase activity (16.6%) ATPase binding (16.6%)" "IPR001907 (29.1%) IPR023562 (29.1%) IPR029045 (29.1%)" "ATP-dependent Clp protease proteolytic subunit (29.1%) Clp protease proteolytic subunit /Translocation-enhancing protein TepA (29.1%) ClpP/crotonase-like domain superfamily (29.1%)" VAALLCHDTFTHPQPTAPEVQKPTLH root GO:0005829 (100%) cytosol (100%) "IPR036255 (50.2%) IPR011978 (49.8%)" "YgfB-like superfamily (50.2%) YgfB-like (49.8%)" LLMPEIPVDKFIDACK Clostridia Bacteria Bacillati Bacillota Clostridia 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (13.3%) GO:0009098 (13.3%) GO:0009099 (13.3%)" "GO:0052654 (13.3%) GO:0052655 (13.3%) GO:0052656 (13.3%)" "isoleucine biosynthetic process (13.3%) L-leucine biosynthetic process (13.3%) L-valine biosynthetic process (13.3%)" "L-leucine-2-oxoglutarate transaminase activity (13.3%) L-valine-2-oxoglutarate transaminase activity (13.3%) L-isoleucine-2-oxoglutarate transaminase activity (13.3%)" "IPR001544 (14.3%) IPR005786 (14.3%) IPR018300 (14.3%)" "Aminotransferase class IV (14.3%) Branched-chain amino acid aminotransferase II (14.3%) Aminotransferase, class IV, conserved site (14.3%)" ISIDTSAIQYESDKEIR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006006 (32.7%) GO:0005829 (33%) "GO:0008861 (33%) GO:0016829 (1.1%) GO:0016746 (0.2%)" glucose metabolic process (32.7%) cytosol (33%) "formate C-acetyltransferase activity (33%) lyase activity (1.1%) acyltransferase activity (0.2%)" "IPR004184 (20.1%) IPR050244 (20.1%) IPR001150 (19.9%)" "Pyruvate formate lyase domain (20.1%) Autonomous Glycyl Radical Cofactor (20.1%) Glycine radical domain (19.9%)" VADVAAQYAEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.17.7.3 (97.8%) 1.17.7.1 (2.2%)" "(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (97.8%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) (2.2%)" "GO:0016114 (17.1%) GO:0019288 (17.1%)" "GO:0046429 (17.1%) GO:0051539 (17.1%) GO:0005506 (16.5%)" "terpenoid biosynthetic process (17.1%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.1%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.1%) 4 iron, 4 sulfur cluster binding (17.1%) iron ion binding (16.5%)" "IPR004588 (25.5%) IPR011005 (25.5%) IPR017178 (24.5%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25.5%) Dihydropteroate synthase-like superfamily (25.5%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (24.5%)" RQSCEAAVAAIQKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" AEGKSEFAENDAYVHATPLIR Bacteria Bacteria "2.3.1.12 (98.6%) 2.3.1.- (1.4%)" "dihydrolipoyllysine-residue acetyltransferase (98.6%) Transferring groups other than amino-acyl groups (1.4%)" "GO:0006086 (20.1%) GO:0006090 (0%) GO:0042867 (0%)" "GO:0005737 (20.1%) GO:0045254 (19.3%)" "GO:0031405 (20.1%) GO:0004742 (19.9%) GO:0016407 (0.2%)" "pyruvate decarboxylation to acetyl-CoA (20.1%) pyruvate metabolic process (0%) pyruvate catabolic process (0%)" "cytoplasm (20.1%) pyruvate dehydrogenase complex (19.3%)" "lipoic acid binding (20.1%) dihydrolipoyllysine-residue acetyltransferase activity (19.9%) acetyltransferase activity (0.2%)" "IPR050743 (11.4%) IPR004167 (11.3%) IPR036625 (11.3%)" "2-oxoacid dehydrogenase family, E2 component (11.4%) Peripheral subunit-binding domain (11.3%) E3-binding domain superfamily (11.3%)" NSTAMLTTFNEVNMKPIMDLR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "2.3.1.61 (98.6%) 2.3.1.- (1.4%)" "dihydrolipoyllysine-residue succinyltransferase (98.6%) Transferring groups other than amino-acyl groups (1.4%)" "GO:0006099 (20.1%) GO:0033512 (19.4%) GO:0006554 (0.3%)" "GO:0005829 (20.1%) GO:0045252 (19.7%) GO:0005737 (0%)" "GO:0004149 (20.1%) GO:0016746 (0.2%) GO:0031405 (0%)" "tricarboxylic acid cycle (20.1%) L-lysine catabolic process to acetyl-CoA via saccharopine (19.4%) lysine catabolic process (0.3%)" "cytosol (20.1%) oxoglutarate dehydrogenase complex (19.7%) cytoplasm (0%)" "dihydrolipoyllysine-residue succinyltransferase activity (20.1%) acyltransferase activity (0.2%) lipoic acid binding (0%)" "IPR001078 (11.3%) IPR023213 (11.3%) IPR050537 (11.3%)" "2-oxoacid dehydrogenase acyltransferase, catalytic domain (11.3%) Chloramphenicol acetyltransferase-like domain superfamily (11.3%) 2-oxoacid dehydrogenase (11.3%)" DINDKKTDLFILK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.1.3.3 (94.3%) 5.1.3.- (5.7%)" "aldose 1-epimerase (94.3%) Acting on carbohydrates and derivatives (5.7%)" "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (20%) IPR011013 (20%) IPR014718 (20%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (20%) Galactose mutarotase-like domain superfamily (20%) Glycoside hydrolase-type carbohydrate-binding (20%)" CYNIETVEDQKVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.1.99.1 (96.8%) 4.4.1.5 (1.6%) 5.1.99.- (1.6%)" "methylmalonyl-CoA epimerase (96.8%) lactoylglutathione lyase (1.6%) Acting on other compounds (1.6%)" GO:0046491 (46.4%) "GO:0004493 (46.4%) GO:0016829 (4.8%) GO:0051213 (1.2%)" L-methylmalonyl-CoA metabolic process (46.4%) "methylmalonyl-CoA epimerase activity (46.4%) lyase activity (4.8%) dioxygenase activity (1.2%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" IIYHTMFDNMQK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 4.2.1.32 (100%) L(+)-tartrate dehydratase (100%) "GO:0006099 (0.1%) GO:0044010 (0.1%) GO:1901275 (0.1%)" "GO:0005829 (0.1%) GO:1902494 (0.1%)" "GO:0046872 (32.9%) GO:0051539 (32.9%) GO:0016829 (22%)" "tricarboxylic acid cycle (0.1%) single-species biofilm formation (0.1%) tartrate metabolic process (0.1%)" "cytosol (0.1%) catalytic complex (0.1%)" "metal ion binding (32.9%) 4 iron, 4 sulfur cluster binding (32.9%) lyase activity (22%)" "IPR004646 (50%) IPR051208 (50%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (50%) Class-I Fumarase/Tartrate Dehydratase (50%)" IDDKLLIISMIDNLLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.1.38 (100%) N-acetyl-gamma-glutamyl-phosphate reductase (100%) GO:0006526 (20%) GO:0005737 (20%) "GO:0003942 (20%) GO:0051287 (20%) GO:0070401 (20%)" L-arginine biosynthetic process (20%) cytoplasm (20%) "N-acetyl-gamma-glutamyl-phosphate reductase activity (20%) NAD binding (20%) NADP+ binding (20%)" "IPR000534 (20%) IPR000706 (20%) IPR023013 (20%)" "Semialdehyde dehydrogenase, NAD-binding (20%) N-acetyl-gamma-glutamyl-phosphate reductase, type 1 (20%) N-acetyl-gamma-glutamyl-phosphate reductase, active site (20%)" NNGSEVQSLDPHKIEGVPESNISR root "GO:0015833 (20.7%) GO:0015031 (18.6%) GO:0006857 (0.1%)" "GO:0030288 (20.4%) GO:0043190 (18.5%) GO:0005886 (0.1%)" "GO:1904680 (20.7%) GO:1900750 (0.1%)" "peptide transport (20.7%) protein transport (18.6%) oligopeptide transport (0.1%)" "outer membrane-bounded periplasmic space (20.4%) ATP-binding cassette (ABC) transporter complex (18.5%) plasma membrane (0.1%)" "peptide transmembrane transporter activity (20.7%) oligopeptide binding (0.1%)" "IPR000914 (25.5%) IPR023765 (25.5%) IPR039424 (25.5%)" "Solute-binding protein family 5 domain (25.5%) Solute-binding protein family 5, conserved site (25.5%) Solute-binding protein family 5 (25.5%)" VLTDKVGKLEFPDALLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.3%) GO:0043335 (16.3%) GO:0051083 (16.3%)" "GO:0003755 (16.3%) GO:0043022 (16.3%) GO:0044183 (16.3%)" "protein transport (16.3%) protein unfolding (16.3%) 'de novo' cotranslational protein folding (16.3%)" "peptidyl-prolyl cis-trans isomerase activity (16.3%) ribosome binding (16.3%) protein folding chaperone (16.3%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" AAGYEPGKDVTIAMDCAASEFYHDGVYDYTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" TIHGAGIEVTEIIDVTPLPHNGCRPPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (19.8%) GO:0022627 (0.2%)" "GO:0003735 (20%) GO:0019843 (19.8%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (19.8%) cytosolic small ribosomal subunit (0.2%)" "structural constituent of ribosome (20%) rRNA binding (19.8%)" "IPR001971 (25.2%) IPR018102 (25.2%) IPR036967 (25.2%)" "Small ribosomal subunit protein uS11 (25.2%) Small ribosomal subunit protein uS11, conserved site (25.2%) Small ribosomal subunit protein uS11 superfamily (25.2%)" MDKFSYAIGLGIGQNLLGMGAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" SKEMCPYQTLNQR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006417 (49.6%) GO:0022611 (0.1%) GO:0032055 (0.1%)" GO:0005737 (49.6%) "GO:0019843 (0.1%) GO:0043022 (0.1%) GO:0043024 (0.1%)" "regulation of translation (49.6%) dormancy process (0.1%) negative regulation of translation in response to stress (0.1%)" cytoplasm (49.6%) "rRNA binding (0.1%) ribosome binding (0.1%) ribosomal small subunit binding (0.1%)" "IPR007040 (50%) IPR023200 (50%)" "Ribosome modulation factor (50%) Ribosome modulation factor domain superfamily (50%)" KEIDKAADTEAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0015977 (24.6%) GO:0009317 (24.6%) "GO:0003989 (24.6%) GO:0004658 (24.6%) GO:0016740 (1.6%)" carbon fixation (24.6%) acetyl-CoA carboxylase complex (24.6%) "acetyl-CoA carboxylase activity (24.6%) propionyl-CoA carboxylase activity (24.6%) transferase activity (1.6%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" SLEVIADSLAGFNHSKYPWLEWDESSK KAPAEPQRYDAVLVAIGR root "1.8.1.4 (99.5%) 1.-.-.- (0.2%) 1.8.1.7 (0.2%)" "dihydrolipoyl dehydrogenase (99.5%) Oxidoreductases (0.2%) glutathione-disulfide reductase (0.2%)" "GO:0006103 (20.1%) GO:0006979 (19.5%) GO:0006090 (0.1%)" "GO:0005737 (18.6%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0004148 (20.3%) GO:0050660 (20.3%) GO:0016491 (0.3%)" "2-oxoglutarate metabolic process (20.1%) response to oxidative stress (19.5%) pyruvate metabolic process (0.1%)" "cytoplasm (18.6%) cytosol (0.1%) plasma membrane (0.1%)" "dihydrolipoyl dehydrogenase (NADH) activity (20.3%) flavin adenine dinucleotide binding (20.3%) oxidoreductase activity (0.3%)" "IPR023753 (12.8%) IPR036188 (12.8%) IPR050151 (12.8%)" "FAD/NAD(P)-binding domain (12.8%) FAD/NAD(P)-binding domain superfamily (12.8%) Class-I pyridine nucleotide-disulfide oxidoreductase (12.8%)" FMELGIAEEWVPVIQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.5%) GO:0005829 (16.5%) "GO:0000049 (16.5%) GO:0004824 (16.5%) GO:0005524 (16.5%)" lysyl-tRNA aminoacylation (16.5%) cytosol (16.5%) "tRNA binding (16.5%) lysine-tRNA ligase activity (16.5%) ATP binding (16.5%)" "IPR002313 (11.3%) IPR004364 (11.3%) IPR004365 (11.3%)" "Lysine-tRNA ligase, class II (11.3%) Aminoacyl-tRNA synthetase, class II (D/K/N) (11.3%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.3%)" AIQNIVFQAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) "GO:0009055 (93.8%) GO:0016491 (6.2%)" "electron transfer activity (93.8%) oxidoreductase activity (6.2%)" "IPR014729 (21.1%) IPR012255 (20.1%) IPR000049 (19.8%)" "Rossmann-like alpha/beta/alpha sandwich fold (21.1%) Electron transfer flavoprotein, beta subunit (20.1%) Electron transfer flavoprotein, beta-subunit, conserved site (19.8%)" MEVNVLNIKGEDTGRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (18.9%) GO:0003723 (1.1%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (18.9%) RNA binding (1.1%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" EGYELQVGQPQVIFK root 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0009409 (9.9%) GO:0000027 (9.4%) GO:0010467 (9.3%)" "GO:0005829 (10.3%) GO:1990904 (10.3%)" "GO:0003924 (10.3%) GO:0005525 (10.3%) GO:0000049 (9.4%)" "response to cold (9.9%) ribosomal large subunit assembly (9.4%) gene expression (9.3%)" "cytosol (10.3%) ribonucleoprotein complex (10.3%)" "GTPase activity (10.3%) GTP binding (10.3%) tRNA binding (9.4%)" "IPR000640 (6.9%) IPR035647 (6.9%) IPR048876 (6.9%)" "Elongation factor EFG, domain V-like (6.9%) EF-G domain III/V-like (6.9%) TypA/BipA, C-terminal domain (6.9%)" RMEEGIYDHEEYAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR004216 (11.1%) IPR005763 (11.1%) IPR009015 (11.1%)" "L-fucose/L-arabinose isomerase, C-terminal (11.1%) L-fucose isomerase (11.1%) L-fucose isomerase, N-terminal/central domain superfamily (11.1%)" LLVQQEPDASSFPNGGLR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (49.8%) "GO:0004356 (50%) GO:0016874 (0.2%)" glutamine biosynthetic process (49.8%) "glutamine synthetase activity (50%) ligase activity (0.2%)" "IPR022147 (14.4%) IPR052725 (14.4%) IPR008146 (14.3%)" "Glutamine synthetase type III N-terminal (14.4%) Glutamine Synthetase Type-3 (14.4%) Glutamine synthetase, catalytic domain (14.3%)" ESFQPAHIDPAHLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "6.3.1.21 (91.4%) 2.1.2.- (8.6%)" "phosphoribosylglycinamide formyltransferase 2 (91.4%) Hydroxymethyl-, formyl- and related transferases (8.6%)" "GO:0006189 (16.2%) GO:0009152 (0.3%)" GO:0005829 (16.7%) "GO:0005524 (16.7%) GO:0000287 (16.5%) GO:0004644 (16.5%)" "'de novo' IMP biosynthetic process (16.2%) purine ribonucleotide biosynthetic process (0.3%)" cytosol (16.7%) "ATP binding (16.7%) magnesium ion binding (16.5%) phosphoribosylglycinamide formyltransferase activity (16.5%)" "IPR003135 (12.6%) IPR011054 (12.6%) IPR011761 (12.6%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.6%) Rudiment single hybrid motif (12.6%) ATP-grasp fold (12.6%)" GCKNAADAAEAIGIGLQAFCIPGSVADDRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR025964 (100%) GGGtGRT protein (100%) TFTPKPADLTHDWYVIDATDVVLGR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium "GO:0006412 (19.9%) GO:0017148 (19.9%)" "GO:0022625 (19.9%) GO:0005840 (0.5%)" "GO:0003729 (19.9%) GO:0003735 (19.9%)" "translation (19.9%) negative regulation of translation (19.9%)" "cytosolic large ribosomal subunit (19.9%) ribosome (0.5%)" "mRNA binding (19.9%) structural constituent of ribosome (19.9%)" "IPR005822 (31.7%) IPR005823 (31.7%) IPR036899 (31.7%)" "Large ribosomal subunit protein uL13 (31.7%) Large ribosomal subunit protein uL13, bacteria (31.7%) Large ribosomal subunit protein uL13 superfamily (31.7%)" GKNENGEFMAPFSPLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.5%) GO:0006516 (19.5%)" GO:0005829 (19.5%) "GO:0000224 (19.5%) GO:0030246 (19.5%) GO:0016798 (2.4%)" "carbohydrate metabolic process (19.5%) glycoprotein catabolic process (19.5%)" cytosol (19.5%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.5%) carbohydrate binding (19.5%) hydrolase activity, acting on glycosyl bonds (2.4%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" SEFTQIGADIEVQVLEIDKENRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.8%) "GO:0022627 (24.2%) GO:0005840 (0.6%) GO:1990904 (0.6%)" "GO:0003729 (24.8%) GO:0003735 (24.8%) GO:0004654 (0.3%)" translation (24.8%) "cytosolic small ribosomal subunit (24.2%) ribosome (0.6%) ribonucleoprotein complex (0.6%)" "mRNA binding (24.8%) structural constituent of ribosome (24.8%) polyribonucleotide nucleotidyltransferase activity (0.3%)" "IPR003029 (24.9%) IPR012340 (24.9%) IPR035104 (24.9%)" "S1 domain (24.9%) Nucleic acid-binding, OB-fold (24.9%) Ribosomal protein S1-like (24.9%)" FGTTFPLLIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (17.4%) IPR014628 (17.4%) IPR014710 (17.4%)" "RmlC-like cupin domain superfamily (17.4%) Mannose-6-phosphate isomerase, Firmicutes type, short form (17.4%) RmlC-like jelly roll fold (17.4%)" KMLGSFNHGSMANAMPQAIGAALAYPGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.5.1 (100%) pyruvate dehydrogenase (quinone) (100%) "GO:0019752 (23.8%) GO:0044281 (1.2%)" "GO:0000287 (25%) GO:0030976 (25%) GO:0003824 (21.4%)" "carboxylic acid metabolic process (23.8%) small molecule metabolic process (1.2%)" "magnesium ion binding (25%) thiamine pyrophosphate binding (25%) catalytic activity (21.4%)" "IPR000399 (11.2%) IPR011766 (11.2%) IPR012001 (11.2%)" "TPP-binding enzyme, conserved site (11.2%) Thiamine pyrophosphate enzyme, TPP-binding (11.2%) Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (11.2%)" RMNAEAGACEDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (50%) GO:0016491 (20.5%) GO:0016692 (15.9%)" "iron ion binding (50%) oxidoreductase activity (20.5%) NADH peroxidase activity (15.9%)" "IPR003251 (12.5%) IPR009040 (12.5%) IPR009078 (12.5%)" "Rubrerythrin, diiron-binding domain (12.5%) Ferritin-like diiron domain (12.5%) Ferritin-like superfamily (12.5%)" QLSLDRDPHGNVQVSLIETEKLLSEMVGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.4%) GO:0006002 (13.9%)" GO:0005829 (14.4%) "GO:0003872 (14.4%) GO:0005524 (14.4%) GO:0046872 (14.4%)" "response to glucose (14.4%) fructose 6-phosphate metabolic process (13.9%)" cytosol (14.4%) "6-phosphofructokinase activity (14.4%) ATP binding (14.4%) metal ion binding (14.4%)" "IPR000023 (25.2%) IPR011183 (25.2%) IPR035966 (25.2%)" "Phosphofructokinase domain (25.2%) Pyrophosphate-dependent phosphofructokinase PfpB (25.2%) Phosphofructokinase superfamily (25.2%)" AYNDMQVIGQTIDDAAGEAIDKCSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.234 (100%) N(6)-L-threonylcarbamoyladenine synthase (100%) "GO:0002949 (22.2%) GO:0006508 (5.1%)" GO:0005737 (22.2%) "GO:0005506 (21.2%) GO:0061711 (16.2%) GO:0008233 (5.1%)" "tRNA threonylcarbamoyladenosine modification (22.2%) proteolysis (5.1%)" cytoplasm (22.2%) "iron ion binding (21.2%) tRNA N(6)-L-threonylcarbamoyladenine synthase activity (16.2%) peptidase activity (5.1%)" "IPR000905 (20.4%) IPR017861 (20.4%) IPR022450 (20.4%)" "Gcp-like domain (20.4%) Kae1/TsaD family (20.4%) tRNA N6-adenosine threonylcarbamoyltransferase, TsaD (20.4%)" RGQVEGMETSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.2%) GO:0005737 (19.7%) "GO:0003746 (20.2%) GO:0005525 (20.2%) GO:0003924 (19.7%)" ribosome disassembly (20.2%) cytoplasm (19.7%) "translation elongation factor activity (20.2%) GTP binding (20.2%) GTPase activity (19.7%)" "IPR000640 (6.3%) IPR005517 (6.3%) IPR014721 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translation elongation factor EFG/EF2, domain IV (6.3%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.3%)" RMIDLFLDNIATK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.6.5.- (75%) 3.6.-.- (25%)" "Acting on GTP; involved in cellular and subcellular movement (75%) Acting on acid anhydrides (25%)" GO:0005737 (33.3%) "GO:0003924 (33.3%) GO:0005525 (33.3%)" cytoplasm (33.3%) "GTPase activity (33.3%) GTP binding (33.3%)" "IPR005129 (50%) IPR027417 (50%)" "SIMIBI class G3E GTPase, ArgK/MeaB (50%) P-loop containing nucleoside triphosphate hydrolase (50%)" VECNQGKPQVNYKEAITK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.3%) GO:0005737 (19.3%) "GO:0003746 (20.4%) GO:0005525 (20.3%) GO:0003924 (19.7%)" ribosome disassembly (20.3%) cytoplasm (19.3%) "translation elongation factor activity (20.4%) GTP binding (20.3%) GTPase activity (19.7%)" "IPR000640 (6.3%) IPR005517 (6.3%) IPR035649 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translation elongation factor EFG/EF2, domain IV (6.3%) EFG, domain V (6.3%)" TFEVAATGPGVDTPACLEK Bacteria Bacteria 2.7.7.38 (100%) 3-deoxy-manno-octulosonate cytidylyltransferase (100%) "GO:0009103 (20.5%) GO:0033468 (18.7%) GO:0044281 (0.4%)" "GO:0005829 (20.5%) GO:0016020 (18.7%)" "GO:0008690 (20.9%) GO:0016779 (0.4%)" "lipopolysaccharide biosynthetic process (20.5%) CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process (18.7%) small molecule metabolic process (0.4%)" "cytosol (20.5%) membrane (18.7%)" "3-deoxy-manno-octulosonate cytidylyltransferase activity (20.9%) nucleotidyltransferase activity (0.4%)" "IPR003329 (34.2%) IPR029044 (34.2%) IPR004528 (31.7%)" "Acylneuraminate cytidylyltransferase (34.2%) Nucleotide-diphospho-sugar transferases (34.2%) 3-deoxy-D-manno-octulosonate cytidylyltransferase (31.7%)" RGQESGRADDNEETIK Bacteria Bacteria "2.7.4.3 (95.2%) 2.7.4.- (4.8%)" "adenylate kinase (95.2%) Phosphotransferases with a phosphate group as acceptor (4.8%)" "GO:0044209 (23.9%) GO:0006139 (1%)" GO:0005737 (23.9%) "GO:0005524 (25.4%) GO:0004017 (24.4%) GO:0019205 (1%)" "AMP salvage (23.9%) nucleobase-containing compound metabolic process (1%)" cytoplasm (23.9%) "ATP binding (25.4%) AMP kinase activity (24.4%) nucleobase-containing compound kinase activity (1%)" "IPR000850 (30%) IPR027417 (30%) IPR033690 (30%)" "Adenylate kinase/UMP-CMP kinase (30%) P-loop containing nucleoside triphosphate hydrolase (30%) Adenylate kinase, conserved site (30%)" HLVKEDGSQAQMDEKLEFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" KGEVHAIMGPNGSGK root "3.6.3.27 (50%) 3.6.3.30 (50%)" "Transferred entry: 7.3.2.1 (50%) Transferred entry: 7.2.2.7 (50%)" "GO:0009507 (0.8%) GO:0009536 (0.8%)" "GO:0005524 (49.2%) GO:0016887 (49.2%)" "chloroplast (0.8%) plastid (0.8%)" "ATP binding (49.2%) ATP hydrolysis activity (49.2%)" "IPR003439 (22.3%) IPR010230 (22.3%) IPR027417 (22.3%)" "ABC transporter-like, ATP-binding domain (22.3%) FeS cluster assembly SUF system, ATPase SufC (22.3%) P-loop containing nucleoside triphosphate hydrolase (22.3%)" VTVQSLDVVR root "GO:0006412 (24.9%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (24.9%) GO:0005840 (0.4%) GO:0005737 (0%)" "GO:0003735 (24.9%) GO:0019843 (24.7%)" "translation (24.9%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.9%) ribosome (0.4%) cytoplasm (0%)" "structural constituent of ribosome (24.9%) rRNA binding (24.7%)" "IPR009000 (25%) IPR019927 (25%) IPR000597 (24.8%)" "Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, bacteria/organella (25%) Large ribosomal subunit protein uL3 (24.8%)" VDATKQYDINEAIALLK root "GO:0006417 (16.8%) GO:0006412 (16.3%) GO:0000027 (0%)" "GO:0022625 (16.9%) GO:0005840 (0.4%) GO:0005737 (0%)" "GO:0000049 (16.4%) GO:0003735 (16.4%) GO:0019843 (16.4%)" "regulation of translation (16.8%) translation (16.3%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (16.9%) ribosome (0.4%) cytoplasm (0%)" "tRNA binding (16.4%) structural constituent of ribosome (16.4%) rRNA binding (16.4%)" "IPR023674 (17.1%) IPR028364 (17%) IPR016095 (16.6%)" "Ribosomal protein uL1-like (17.1%) Ribosomal protein uL1/ribosomal biogenesis protein (17%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.6%)" TTLAEAMLYEGGVIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000795 (7.8%) IPR005225 (7.8%) IPR027417 (7.8%)" "Translational (tr)-type GTP-binding domain (7.8%) Small GTP-binding domain (7.8%) P-loop containing nucleoside triphosphate hydrolase (7.8%)" GDRVESIPLLEVAGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (8.3%) GO:0030388 (8.3%) GO:0061621 (8.3%)" GO:0005945 (8.3%) "GO:0003872 (8.3%) GO:0005524 (8.3%) GO:0016208 (8.3%)" "fructose 6-phosphate metabolic process (8.3%) fructose 1,6-bisphosphate metabolic process (8.3%) canonical glycolysis (8.3%)" 6-phosphofructokinase complex (8.3%) "6-phosphofructokinase activity (8.3%) ATP binding (8.3%) AMP binding (8.3%)" "IPR000023 (20%) IPR012003 (20%) IPR012829 (20%)" "Phosphofructokinase domain (20%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (20%) Phosphofructokinase, mixed-substrate PFK group III (20%)" MVGSHTGSGLLAEGDTKGWDFWKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR006311 (20%) IPR013022 (20%) IPR019546 (20%)" "Twin-arginine translocation pathway, signal sequence (20%) Xylose isomerase-like, TIM barrel domain (20%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (20%)" MDQDWIPVEK Bacteroidota Bacteria Pseudomonadati Bacteroidota "5.4.2.11 (98.8%) 5.4.2.1 (1.2%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (98.8%) Transferred entry: 5.4.2.11 and 5.4.2.12 (1.2%)" "GO:0006094 (33.3%) GO:0006096 (33.3%)" GO:0004619 (33.3%) "gluconeogenesis (33.3%) glycolytic process (33.3%)" phosphoglycerate mutase activity (33.3%) "IPR001345 (25%) IPR005952 (25%) IPR013078 (25%)" "Phosphoglycerate/bisphosphoglycerate mutase, active site (25%) Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%)" LISDFVNDNLSNWYVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.4%) GO:0005737 (13.9%) "GO:0000049 (14.5%) GO:0004822 (14.5%) GO:0005524 (14.5%)" isoleucyl-tRNA aminoacylation (14.4%) cytoplasm (13.9%) "tRNA binding (14.5%) isoleucine-tRNA ligase activity (14.5%) ATP binding (14.5%)" "IPR009080 (12.7%) IPR013155 (12.7%) IPR023586 (12.7%)" "Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (12.7%) Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding (12.7%) Isoleucine-tRNA ligase, type 2 (12.7%)" IQAIHFDATAQLEAFIQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003489 (50%) IPR036567 (50%)" "Ribosome hibernation promoting factor/RaiA (50%) Ribosome hibernation promotion factor-like (50%)" GSFVYVTPNTNFVSVKGEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR025347 (100%) Protein of unknown function DUF4251 (100%) AGMAVGLAGLFIEAHPDPEHAK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 2.5.1.55 (100%) 3-deoxy-8-phosphooctulonate synthase (100%) "GO:0019294 (29.6%) GO:0009103 (2.9%) GO:0046394 (0.8%)" "GO:0005737 (32.3%) GO:0005829 (0.3%) GO:0032991 (0.3%)" "GO:0008676 (32.5%) GO:0016740 (1.1%) GO:0042802 (0.3%)" "keto-3-deoxy-D-manno-octulosonic acid biosynthetic process (29.6%) lipopolysaccharide biosynthetic process (2.9%) carboxylic acid biosynthetic process (0.8%)" "cytoplasm (32.3%) cytosol (0.3%) protein-containing complex (0.3%)" "3-deoxy-8-phosphooctulonate synthase activity (32.5%) transferase activity (1.1%) identical protein binding (0.3%)" "IPR006218 (33.3%) IPR006269 (33.3%) IPR013785 (33.3%)" "DAHP synthetase I/KDSA (33.3%) 3-deoxy-8-phosphooctulonate synthase (33.3%) Aldolase-type TIM barrel (33.3%)" VMIHQPLGGAQGQASDIEITAR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.4.21.92 (100%) endopeptidase Clp (100%) GO:0006515 (16.6%) "GO:0005737 (16.6%) GO:0009368 (16.6%) GO:0016020 (0.3%)" "GO:0004176 (16.6%) GO:0004252 (16.6%) GO:0051117 (16.6%)" protein quality control for misfolded or incompletely synthesized proteins (16.6%) "cytoplasm (16.6%) endopeptidase Clp complex (16.6%) membrane (0.3%)" "ATP-dependent peptidase activity (16.6%) serine-type endopeptidase activity (16.6%) ATPase binding (16.6%)" "IPR001907 (29.1%) IPR023562 (29.1%) IPR029045 (29.1%)" "ATP-dependent Clp protease proteolytic subunit (29.1%) Clp protease proteolytic subunit /Translocation-enhancing protein TepA (29.1%) ClpP/crotonase-like domain superfamily (29.1%)" LVAGSVGDDEPR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.22 (100%) histidine decarboxylase (100%) GO:0006520 (50%) "GO:0016831 (47.1%) GO:0004398 (2.9%)" amino acid metabolic process (50%) "carboxy-lyase activity (47.1%) histidine decarboxylase activity (2.9%)" "IPR016104 (81%) IPR016105 (19%)" "Pyruvoyl-dependent histidine/arginine decarboxylase (81%) Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain (19%)" GLAEDASDEEKKAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" KQESVEGLVNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.4%) GO:0043335 (16.4%) GO:0051083 (16.4%)" "GO:0003755 (16.4%) GO:0043022 (16.4%) GO:0044183 (16.4%)" "protein transport (16.4%) protein unfolding (16.4%) 'de novo' cotranslational protein folding (16.4%)" "peptidyl-prolyl cis-trans isomerase activity (16.4%) ribosome binding (16.4%) protein folding chaperone (16.4%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" AKYPDLQIIGGNVATAAGAR root 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%) GO:0009411 (0.2%)" "GO:0005737 (0.3%) GO:0005829 (0.2%) GO:0005886 (0.2%)" "GO:0003938 (20%) GO:0046872 (20%) GO:0000166 (17.2%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%) response to UV (0.2%)" "cytoplasm (0.3%) cytosol (0.2%) plasma membrane (0.2%)" "IMP dehydrogenase activity (20%) metal ion binding (20%) nucleotide binding (17.2%)" "IPR001093 (17%) IPR005990 (17%) IPR013785 (17%)" "IMP dehydrogenase/GMP reductase (17%) Inosine-5'-monophosphate dehydrogenase (17%) Aldolase-type TIM barrel (17%)" LQPIIMLQGSNQEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.21 (100%) histidine--tRNA ligase (100%) GO:0006427 (25%) GO:0005737 (25%) "GO:0004821 (25%) GO:0005524 (25%)" histidyl-tRNA aminoacylation (25%) cytoplasm (25%) "histidine-tRNA ligase activity (25%) ATP binding (25%)" "IPR004154 (12.5%) IPR004516 (12.5%) IPR006195 (12.5%)" "Anticodon-binding (12.5%) Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit (12.5%) Aminoacyl-tRNA synthetase, class II (12.5%)" PTIQQLVR root "GO:0006412 (20%) GO:0046677 (0%) GO:0000902 (0%)" "GO:0015935 (20%) GO:0009507 (1.5%) GO:0009536 (0.6%)" "GO:0003735 (20%) GO:0019843 (20%) GO:0000049 (17.5%)" "translation (20%) response to antibiotic (0%) cell morphogenesis (0%)" "small ribosomal subunit (20%) chloroplast (1.5%) plastid (0.6%)" "structural constituent of ribosome (20%) rRNA binding (20%) tRNA binding (17.5%)" "IPR006032 (33.3%) IPR005679 (33.3%) IPR012340 (33.3%)" "Small ribosomal subunit protein uS12 (33.3%) Ribosomal protein uS12, bacteria (33.3%) Nucleic acid-binding, OB-fold (33.3%)" LATPDPMVTVGVLCEGFPVEMIVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR028923 (50.6%) IPR018236 (49.4%)" "SAICAR synthetase/ADE2, N-terminal (50.6%) SAICAR synthetase, conserved site (49.4%)" EIFEELFPLPSAAECVPGGPSVACSSAK root 6.3.5.4 (100%) asparagine synthase (glutamine-hydrolyzing) (100%) "GO:0006529 (24.9%) GO:0070981 (0.1%) GO:0006541 (0.1%)" "GO:0005829 (24.9%) GO:0005737 (0.1%)" "GO:0004066 (25%) GO:0005524 (23.9%) GO:0016874 (0.4%)" "obsolete asparagine biosynthetic process (24.9%) L-asparagine biosynthetic process (0.1%) glutamine metabolic process (0.1%)" "cytosol (24.9%) cytoplasm (0.1%)" "asparagine synthase (glutamine-hydrolyzing) activity (25%) ATP binding (23.9%) ligase activity (0.4%)" "IPR014729 (14.9%) IPR050795 (14.9%) IPR001962 (14.8%)" "Rossmann-like alpha/beta/alpha sandwich fold (14.9%) Asparagine Synthetase (14.9%) Asparagine synthase (14.8%)" MWGFENVYTVPEQMIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.2.2 (66.7%) 5.4.2.- (33.3%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (66.7%) Phosphotransferases (phosphomutases) (33.3%)" "GO:0005975 (24.1%) GO:0006166 (24.1%)" "GO:0000287 (24.1%) GO:0008973 (24.1%) GO:0004614 (3.4%)" "carbohydrate metabolic process (24.1%) purine ribonucleoside salvage (24.1%)" "magnesium ion binding (24.1%) phosphopentomutase activity (24.1%) phosphoglucomutase activity (3.4%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" YTAREPEYNFVAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR008323 (100%) Uncharacterised conserved protein UCP033563 (100%) IRQDWYYLQSSDHFYYMSTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005975 (50%) "GO:0003824 (25%) GO:0016787 (20%) GO:0016798 (5%)" carbohydrate metabolic process (50%) "catalytic activity (25%) hydrolase activity (20%) hydrolase activity, acting on glycosyl bonds (5%)" "IPR004300 (33.3%) IPR011330 (33.3%) IPR052046 (33.3%)" "Glycoside hydrolase family 57, N-terminal domain (33.3%) Glycoside hydrolase/deacetylase, beta/alpha-barrel (33.3%) Glycosyl hydrolase family 57 (33.3%)" LMDDTIAQVQTSGEAEKWFDKWFK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006865 (32.5%) GO:0015813 (0.3%) GO:0070778 (0.3%)" "GO:0005576 (32.5%) GO:0030288 (32.5%) GO:0016020 (0.3%)" "GO:0016595 (0.3%) GO:0070335 (0.3%)" "amino acid transport (32.5%) L-glutamate transmembrane transport (0.3%) L-aspartate transmembrane transport (0.3%)" "extracellular region (32.5%) outer membrane-bounded periplasmic space (32.5%) membrane (0.3%)" "glutamate binding (0.3%) aspartate binding (0.3%)" "IPR001638 (50%) IPR051455 (50%)" "Solute-binding protein family 3/N-terminal domain of MltF (50%) Bacterial solute-binding protein 3 (50%)" LKDLETQSQDGTFDK root "GO:0006412 (32.9%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0022627 (33%) GO:0005840 (0.8%) GO:0005737 (0.1%)" "GO:0003735 (33%) GO:0008270 (0.1%)" "translation (32.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (33%) ribosome (0.8%) cytoplasm (0.1%)" "structural constituent of ribosome (33%) zinc ion binding (0.1%)" "IPR001865 (25%) IPR005706 (25%) IPR023591 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25%)" VVNIASYQVSPNDVVSIR root "GO:0042274 (19.7%) GO:0006412 (19.6%) GO:0006353 (0.1%)" "GO:0015935 (19.8%) GO:0005840 (0.4%) GO:0005737 (0%)" "GO:0019843 (19.8%) GO:0003735 (19.8%) GO:0016787 (0.3%)" "ribosomal small subunit biogenesis (19.7%) translation (19.6%) DNA-templated transcription termination (0.1%)" "small ribosomal subunit (19.8%) ribosome (0.4%) cytoplasm (0%)" "rRNA binding (19.8%) structural constituent of ribosome (19.8%) hydrolase activity (0.3%)" "IPR036986 (16.7%) IPR002942 (16.7%) IPR022801 (16.7%)" "RNA-binding S4 domain superfamily (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4 (16.7%)" LSWSSEEVDQKLQSIMENIHEQCVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006537 (26.5%) GO:0005829 (23.5%) "GO:0004354 (26.5%) GO:0000166 (23.5%)" glutamate biosynthetic process (26.5%) cytosol (23.5%) "glutamate dehydrogenase (NADP+) activity (26.5%) nucleotide binding (23.5%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" MTILATGFTMDDIPLIADKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0000917 (14.3%) GO:0043093 (14.3%) GO:0051258 (14.3%)" "GO:0005737 (14.3%) GO:0032153 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%)" "division septum assembly (14.3%) FtsZ-dependent cytokinesis (14.3%) protein polymerization (14.3%)" "cytoplasm (14.3%) cell division site (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" VLVPDLNAGCSLADSCPADEFAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.5.1.72 (100%) quinolinate synthase (100%) GO:0034628 (20%) GO:0005829 (20%) "GO:0008987 (20%) GO:0046872 (20%) GO:0051539 (20%)" 'de novo' NAD+ biosynthetic process from L-aspartate (20%) cytosol (20%) "quinolinate synthetase A activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR003473 (33.3%) IPR023066 (33.3%) IPR036094 (33.3%)" "Quinolinate synthetase A (33.3%) Quinolinate synthase A, type 2 (33.3%) Quinolinate synthetase A superfamily (33.3%)" ISFTGNLYPSSESNVFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR025347 (100%) Protein of unknown function DUF4251 (100%) HIATGAEYIVGADSSCLMHQNGIIAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0005829 (50%) GO:0016491 (50%) cytosol (50%) oxidoreductase activity (50%) IPR004017 (100%) Cysteine-rich domain (100%) ALLKDKEISEDDDRR root "GO:0002184 (33.1%) GO:0006412 (0.2%)" "GO:0005829 (33.1%) GO:0005737 (0.2%) GO:0016020 (0.2%)" "GO:0043023 (33.1%) GO:0003746 (0.2%)" "cytoplasmic translational termination (33.1%) translation (0.2%)" "cytosol (33.1%) cytoplasm (0.2%) membrane (0.2%)" "ribosomal large subunit binding (33.1%) translation elongation factor activity (0.2%)" "IPR023584 (33.4%) IPR036191 (33.4%) IPR002661 (33.2%)" "Ribosome recycling factor domain (33.4%) RRF superfamily (33.4%) Ribosome recycling factor (33.2%)" EGCPVCAQIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.7.1 (75%) 1.2.7.- (25%)" "pyruvate synthase (75%) With an iron-sulfur protein as acceptor (25%)" "GO:0006979 (14.4%) GO:0022900 (14.4%) GO:0044281 (13.6%)" "GO:0005506 (14.4%) GO:0030976 (14.4%) GO:0051539 (14.4%)" "response to oxidative stress (14.4%) electron transport chain (14.4%) small molecule metabolic process (13.6%)" "iron ion binding (14.4%) thiamine pyrophosphate binding (14.4%) 4 iron, 4 sulfur cluster binding (14.4%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" LLEYDDVMNKQR Bacteria Bacteria 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.4%) GO:0017038 (11.4%) GO:0043952 (11.4%)" "GO:0005886 (11.4%) GO:0031522 (11.4%) GO:0005829 (11.3%)" "GO:0005524 (11.4%) GO:0046872 (8.6%) GO:0004386 (0.2%)" "protein targeting (11.4%) protein import (11.4%) protein transport by the Sec complex (11.4%)" "plasma membrane (11.4%) cell envelope Sec protein transport complex (11.4%) cytosol (11.3%)" "ATP binding (11.4%) metal ion binding (8.6%) helicase activity (0.2%)" "IPR000185 (8%) IPR011116 (8%) IPR036266 (8%)" "Protein translocase subunit SecA (8%) SecA Wing/Scaffold (8%) SecA, Wing/Scaffold superfamily (8%)" VLNDTIASLFAGLTDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0001678 (13.1%) GO:0006006 (13.1%) GO:0006096 (13.1%)" GO:0005829 (8.3%) "GO:0004340 (13.1%) GO:0005524 (13.1%) GO:0005536 (13.1%)" "intracellular glucose homeostasis (13.1%) glucose metabolic process (13.1%) glycolytic process (13.1%)" cytosol (8.3%) "glucokinase activity (13.1%) ATP binding (13.1%) D-glucose binding (13.1%)" "IPR001312 (25%) IPR022672 (25%) IPR022673 (25%)" "Hexokinase (25%) Hexokinase, N-terminal (25%) Hexokinase, C-terminal (25%)" AKEELADINAEIKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.4.15.5 (62.5%) 3.4.24.- (25%) 3.4.-.- (12.5%)" "peptidyl-dipeptidase Dcp (62.5%) Metalloendopeptidases (25%) Acting on peptide bonds (peptidases) (12.5%)" GO:0006508 (19.5%) GO:0005829 (19.5%) "GO:0004180 (19.5%) GO:0004222 (19.5%) GO:0046872 (19.5%)" proteolysis (19.5%) cytosol (19.5%) "carboxypeptidase activity (19.5%) metalloendopeptidase activity (19.5%) metal ion binding (19.5%)" "IPR001567 (17.4%) IPR024077 (17.4%) IPR024079 (17.4%)" "Peptidase M3A/M3B catalytic domain (17.4%) Neurolysin/Thimet oligopeptidase, domain 2 (17.4%) Metallopeptidase, catalytic domain superfamily (17.4%)" EFNLPAMQPGSSIMPGKVNPVIPEVMNQICYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.2%) IPR008948 (14.2%) IPR018951 (14.2%)" "Fumarate lyase family (14.2%) L-Aspartase-like (14.2%) Fumarase C, C-terminal (14.2%)" VVSPVLVNDEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.7%) GO:0006164 (0.4%)" GO:0005737 (20.2%) "GO:0004642 (20.2%) GO:0005524 (19.7%) GO:0046872 (19.7%)" "'de novo' IMP biosynthetic process (19.7%) purine nucleotide biosynthetic process (0.4%)" cytoplasm (20.2%) "phosphoribosylformylglycinamidine synthase activity (20.2%) ATP binding (19.7%) metal ion binding (19.7%)" "IPR010918 (11.2%) IPR036676 (11.2%) IPR036921 (11.2%)" "PurM-like, C-terminal domain (11.2%) PurM-like, C-terminal domain superfamily (11.2%) PurM-like, N-terminal domain superfamily (11.2%)" SDLSELSLSDLKGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" KVTLNDAIFGIEPNDHAIYLDVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (19%) GO:0003723 (1%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (19%) RNA binding (1%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" VNGADGVVLFNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.3.1.1 (100%) dihydrouracil dehydrogenase (NAD(+)) (100%) "GO:0006210 (13%) GO:0006212 (13%) GO:0006222 (8.7%)" GO:0005737 (15.2%) "GO:0002058 (13%) GO:0004152 (13%) GO:0050661 (13%)" "thymine catabolic process (13%) uracil catabolic process (13%) UMP biosynthetic process (8.7%)" cytoplasm (15.2%) "uracil binding (13%) dihydroorotate dehydrogenase activity (13%) NADP binding (13%)" "IPR005720 (31.8%) IPR012135 (31.8%) IPR013785 (31.8%)" "Dihydroorotate dehydrogenase, catalytic (31.8%) Dihydroorotate dehydrogenase, class 1/ 2 (31.8%) Aldolase-type TIM barrel (31.8%)" GAYGTVIMDSRHPDTLLAAR root 2.6.1.16 (100%) glutamine--fructose-6-phosphate transaminase (isomerizing) (100%) "GO:0006002 (13%) GO:0006487 (13%) GO:0006047 (12.9%)" GO:0005829 (13%) "GO:0004360 (13%) GO:0097367 (12%) GO:0008483 (0.5%)" "fructose 6-phosphate metabolic process (13%) protein N-linked glycosylation (13%) UDP-N-acetylglucosamine metabolic process (12.9%)" cytosol (13%) "glutamine-fructose-6-phosphate transaminase (isomerizing) activity (13%) carbohydrate derivative binding (12%) transaminase activity (0.5%)" "IPR017932 (13.3%) IPR029055 (13.3%) IPR047084 (12.6%)" "Glutamine amidotransferase type 2 domain (13.3%) Nucleophile aminohydrolases, N-terminal (13.3%) Glucosamine-fructose-6-phosphate aminotransferase, isomerising, N-terminal domain (12.6%)" GSVNIDDEGVDGQKTYIVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006508 (33.3%) GO:0005829 (33.3%) GO:0008237 (33.3%) proteolysis (33.3%) cytosol (33.3%) metallopeptidase activity (33.3%) "IPR002510 (13.2%) IPR025502 (13.2%) IPR035068 (13.2%)" "Metalloprotease TldD/E, N-terminal domain (13.2%) TldD (13.2%) Metalloprotease TldD/PmbA, N-terminal (13.2%)" AVELDPKDENSKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" RIKDSLPDGSTQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003677 (100%) DNA binding (100%) ALKGDKWCGLVIDIENQSEMTDKR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0009055 (50%) GO:0010181 (50%)" "electron transfer activity (50%) FMN binding (50%)" "IPR008254 (25%) IPR010086 (25%) IPR029039 (25%)" "Flavodoxin/nitric oxide synthase (25%) Flavodoxin, long chain (25%) Flavoprotein-like superfamily (25%)" YFCIEFLHVKPGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043043 (33.3%) "GO:0005829 (31.6%) GO:0005737 (1.7%)" GO:0003746 (33.3%) peptide biosynthetic process (33.3%) "cytosol (31.6%) cytoplasm (1.7%)" translation elongation factor activity (33.3%) "IPR001059 (11.1%) IPR008991 (11.1%) IPR011768 (11.1%)" "Translation elongation factor P/YeiP, central (11.1%) Translation protein SH3-like domain superfamily (11.1%) Translation elongation factor P (11.1%)" AIDDAAAGKPFDTSLLETLEGLAHR root 3.4.-.- (100%) Acting on peptide bonds (peptidases) (100%) "GO:0006508 (25.4%) GO:0008033 (23.9%) GO:0002098 (0.1%)" GO:0005829 (25.1%) GO:0008233 (25.4%) "proteolysis (25.4%) tRNA processing (23.9%) tRNA wobble uridine modification (0.1%)" cytosol (25.1%) peptidase activity (25.4%) "IPR051454 (33.6%) IPR001539 (33.5%) IPR032525 (32.8%)" "RNA and ubiquinone modification enzymes (33.6%) Peptidase U32 (33.5%) Peptidase family U32, C-terminal (32.8%)" GKYKPNFTPHVDCGDNVIIINADK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0006412 (19.9%) GO:0017148 (19.9%)" "GO:0022625 (19.9%) GO:0005840 (0.3%)" "GO:0003729 (19.9%) GO:0003735 (19.9%)" "translation (19.9%) negative regulation of translation (19.9%)" "cytosolic large ribosomal subunit (19.9%) ribosome (0.3%)" "mRNA binding (19.9%) structural constituent of ribosome (19.9%)" "IPR005822 (25.3%) IPR005823 (25.3%) IPR036899 (25.3%)" "Large ribosomal subunit protein uL13 (25.3%) Large ribosomal subunit protein uL13, bacteria (25.3%) Large ribosomal subunit protein uL13 superfamily (25.3%)" VATQMGNQGNSGDGVR Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.1.1.18 (75%) 1.1.1.369 (25%)" "inositol 2-dehydrogenase (75%) D-chiro-inositol 1-dehydrogenase (25%)" "GO:0000166 (85.7%) GO:0050112 (14.3%)" "nucleotide binding (85.7%) inositol 2-dehydrogenase (NAD+) activity (14.3%)" "IPR000683 (18%) IPR036291 (18%) IPR043906 (18%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (18%) NAD(P)-binding domain superfamily (18%) Gfo/Idh/MocA-like oxidoreductase, bacterial type, C-terminal (18%)" HITVDGQVVNIPSYAVKPGQLIGVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006412 (19.5%) GO:0042274 (19.5%)" "GO:0015935 (19.5%) GO:0005840 (0.9%) GO:1990904 (0.9%)" "GO:0019843 (20.4%) GO:0003735 (19.5%)" "translation (19.5%) ribosomal small subunit biogenesis (19.5%)" "small ribosomal subunit (19.5%) ribosome (0.9%) ribonucleoprotein complex (0.9%)" "rRNA binding (20.4%) structural constituent of ribosome (19.5%)" "IPR002942 (17.2%) IPR036986 (17.2%) IPR001912 (16.4%)" "RNA-binding S4 domain (17.2%) RNA-binding S4 domain superfamily (17.2%) Small ribosomal subunit protein uS4, N-terminal (16.4%)" EGNIAMNEPGSSLSSPTR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (33.3%) GO:0006044 (33.3%)" GO:0004342 (33.3%) "carbohydrate metabolic process (33.3%) N-acetylglucosamine metabolic process (33.3%)" glucosamine-6-phosphate deaminase activity (33.3%) "IPR003737 (14.8%) IPR004547 (14.8%) IPR006148 (14.8%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.8%) Glucosamine-6-phosphate isomerase (14.8%) Glucosamine/galactosamine-6-phosphate isomerase (14.8%)" LAHFDREVIPER root 1.11.1.6 (100%) catalase (100%) "GO:0042744 (16.5%) GO:0042542 (16.5%) GO:0006979 (0%)" "GO:0005737 (16.5%) GO:0042597 (1.4%) GO:0016020 (0%)" "GO:0004096 (16.5%) GO:0020037 (16.5%) GO:0046872 (16.1%)" "hydrogen peroxide catabolic process (16.5%) response to hydrogen peroxide (16.5%) response to oxidative stress (0%)" "cytoplasm (16.5%) periplasmic space (1.4%) membrane (0%)" "catalase activity (16.5%) heme binding (16.5%) metal ion binding (16.1%)" "IPR011614 (12.9%) IPR018028 (12.9%) IPR020835 (12.9%)" "Catalase core domain (12.9%) Catalase, mono-functional, haem-containing (12.9%) Catalase superfamily (12.9%)" KVTDATEAQIGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" VRDVYNINDEVLVMVATDR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" KIDIVDGMIEGLS Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.3 (100%) formate--tetrahydrofolate ligase (100%) GO:0035999 (33.3%) "GO:0004329 (33.3%) GO:0005524 (33.3%)" tetrahydrofolate interconversion (33.3%) "formate-tetrahydrofolate ligase activity (33.3%) ATP binding (33.3%)" "IPR000559 (33.3%) IPR020628 (33.3%) IPR027417 (33.3%)" "Formate-tetrahydrofolate ligase, FTHFS (33.3%) Formate-tetrahydrofolate ligase, FTHFS, conserved site (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" VSSTGTIFGSVGNIQIAEELAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (19.9%) "GO:0005840 (20.5%) GO:1990904 (19.9%)" "GO:0003735 (19.9%) GO:0019843 (19.9%)" translation (19.9%) "ribosome (20.5%) ribonucleoprotein complex (19.9%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%)" "IPR000244 (14.3%) IPR009027 (14.3%) IPR020069 (14.3%)" "Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.3%) Large ribosomal subunit protein bL9, C-terminal (14.3%)" FQQSIILPDNVEKDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006457 (16.7%) GO:0009408 (16.7%) GO:0009651 (16.7%)" GO:0051082 (16.7%) "protein folding (16.7%) response to heat (16.7%) response to salt stress (16.7%)" unfolded protein binding (16.7%) "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" SAIQAEQDKEKEDNLVKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR007139 (100%) Protein of unknown function DUF349 (100%) ATYTMIFDHYEQVPASVAK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0032790 (20.4%) GO:0005737 (19.4%) "GO:0003746 (20.4%) GO:0005525 (20.4%) GO:0003924 (19.4%)" ribosome disassembly (20.4%) cytoplasm (19.4%) "translation elongation factor activity (20.4%) GTP binding (20.4%) GTPase activity (19.4%)" "IPR000640 (6.4%) IPR005517 (6.4%) IPR009022 (6.4%)" "Elongation factor EFG, domain V-like (6.4%) Translation elongation factor EFG/EF2, domain IV (6.4%) Elongation factor G, domain III (6.4%)" AEGEAEQPMAAWEK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" INPEYSDVETDLYNPCAPGSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "4.1.1.96 (96.2%) 5.6.2.4 (3.8%)" "carboxynorspermidine decarboxylase (96.2%) DNA 3'-5' helicase (3.8%)" "GO:0008295 (23%) GO:0009089 (23%) GO:0045312 (23%)" "GO:0005829 (1%) GO:0033202 (1%)" "GO:0008836 (23%) GO:0003677 (1%) GO:0005524 (1%)" "spermidine biosynthetic process (23%) lysine biosynthetic process via diaminopimelate (23%) nor-spermidine biosynthetic process (23%)" "cytosol (1%) DNA helicase complex (1%)" "diaminopimelate decarboxylase activity (23%) DNA binding (1%) ATP binding (1%)" "IPR029066 (24.5%) IPR005730 (23.5%) IPR009006 (23.5%)" "PLP-binding barrel (24.5%) Carboxynorspermidine decarboxylase (23.5%) Alanine racemase/group IV decarboxylase, C-terminal (23.5%)" AYYGETVEILKDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" HGIFAVDRDVMAAFDQIDVLNK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 4.1.2.19 (100%) rhamnulose-1-phosphate aldolase (100%) GO:0019323 (33.3%) GO:0005829 (33.3%) "GO:0016832 (19.4%) GO:0008994 (13.9%)" pentose catabolic process (33.3%) cytosol (33.3%) "aldehyde-lyase activity (19.4%) rhamnulose-1-phosphate aldolase activity (13.9%)" "IPR001303 (33.3%) IPR036409 (33.3%) IPR050197 (33.3%)" "Class II aldolase/adducin N-terminal (33.3%) Class II aldolase/adducin N-terminal domain superfamily (33.3%) Aldolase class II family, sugar metabolism enzymes (33.3%)" LYAIGECSCTGLHGGNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.3.16 (100%) L-aspartate oxidase (100%) "GO:0034628 (33.8%) GO:0006508 (0.2%)" "GO:0005737 (31.8%) GO:0016020 (0.2%)" "GO:0008734 (33.8%) GO:0016491 (0.2%)" "'de novo' NAD+ biosynthetic process from L-aspartate (33.8%) proteolysis (0.2%)" "cytoplasm (31.8%) membrane (0.2%)" "L-aspartate oxidase activity (33.8%) oxidoreductase activity (0.2%)" "IPR003953 (16.7%) IPR005288 (16.7%) IPR015939 (16.6%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (16.7%) L-aspartate oxidase (16.7%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (16.6%)" ASGVGYDELAMVNGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0046034 (33.3%) GO:1902600 (33.3%)" GO:0005524 (33.3%) "ATP metabolic process (33.3%) proton transmembrane transport (33.3%)" ATP binding (33.3%) "IPR000194 (20%) IPR004100 (20%) IPR022879 (20%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (20%) V-type ATP synthase regulatory subunit B/beta (20%)" AVEDITTYPSILGGR Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (24.9%) GO:0005829 (24.9%) "GO:0003937 (24.9%) GO:0004643 (24.9%) GO:0016740 (0.2%)" 'de novo' IMP biosynthetic process (24.9%) cytosol (24.9%) "IMP cyclohydrolase activity (24.9%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (24.9%) transferase activity (0.2%)" "IPR002695 (20.6%) IPR011607 (20.6%) IPR036914 (20.6%)" "Bifunctional purine biosynthesis protein PurH-like (20.6%) Methylglyoxal synthase-like domain (20.6%) Methylglyoxal synthase-like domain superfamily (20.6%)" NSLTTLPMGGGK root "1.4.1.4 (99%) 1.4.1.2 (0.6%) 1.4.1.3 (0.3%)" "glutamate dehydrogenase (NADP(+)) (99%) glutamate dehydrogenase (0.6%) glutamate dehydrogenase [NAD(P)(+)] (0.3%)" "GO:0006537 (27.5%) GO:0006281 (0%) GO:0006520 (0%)" "GO:0005829 (27.5%) GO:0009986 (0%) GO:0016020 (0%)" "GO:0004354 (27.5%) GO:0000166 (16.5%) GO:0004352 (0.8%)" "glutamate biosynthetic process (27.5%) DNA repair (0%) amino acid metabolic process (0%)" "cytosol (27.5%) cell surface (0%) membrane (0%)" "glutamate dehydrogenase (NADP+) activity (27.5%) nucleotide binding (16.5%) glutamate dehydrogenase (NAD+) activity (0.8%)" "IPR006097 (13.1%) IPR050724 (13.1%) IPR046346 (13%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (13.1%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (13.1%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (13%)" ALENIEGDFSDLNVALKGNTAVMFSQVANAPAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" LGSNLTNPIALINQLYANGANAVVLFNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.3.1.1 (66.7%) 1.3.98.1 (33.3%)" "dihydrouracil dehydrogenase (NAD(+)) (66.7%) dihydroorotate oxidase (fumarate) (33.3%)" "GO:0006207 (24.5%) GO:0044205 (21.3%) GO:0006222 (2.1%)" GO:0005737 (24.5%) "GO:0004152 (21.3%) GO:0004159 (3.2%) GO:1990663 (3.2%)" "'de novo' pyrimidine nucleobase biosynthetic process (24.5%) 'de novo' UMP biosynthetic process (21.3%) UMP biosynthetic process (2.1%)" cytoplasm (24.5%) "dihydroorotate dehydrogenase activity (21.3%) dihydropyrimidine dehydrogenase (NAD+) activity (3.2%) dihydroorotate dehydrogenase (fumarate) activity (3.2%)" "IPR013785 (25.6%) IPR050074 (25.6%) IPR005720 (24.4%)" "Aldolase-type TIM barrel (25.6%) Dihydroorotate dehydrogenase (25.6%) Dihydroorotate dehydrogenase, catalytic (24.4%)" FAEKELLNFTLLSDEDHQVCEQFGVWGEK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "1.11.1.24 (97.4%) 1.11.1.15 (2.1%) 1.-.-.- (0.5%)" "thioredoxin-dependent peroxiredoxin (97.4%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (2.1%) Oxidoreductases (0.5%)" "GO:0034599 (24.6%) GO:0045454 (24.6%) GO:0006508 (0.1%)" "GO:0005737 (24.6%) GO:0005829 (0.1%)" "GO:0008379 (24.6%) GO:0004601 (0.4%) GO:0004222 (0.1%)" "cellular response to oxidative stress (24.6%) cell redox homeostasis (24.6%) proteolysis (0.1%)" "cytoplasm (24.6%) cytosol (0.1%)" "thioredoxin peroxidase activity (24.6%) peroxidase activity (0.4%) metalloendopeptidase activity (0.1%)" "IPR000866 (20.6%) IPR036249 (20.6%) IPR050924 (20.6%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (20.6%) Thioredoxin-like superfamily (20.6%) Thiol-specific peroxidase BCP/PrxQ (20.6%)" DRFFLDPGHMSPMLYSTLALTGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.2.1.1 (97.4%) 2.2.1.- (2.6%)" "transketolase (97.4%) Transketolases and transaldolases (2.6%)" GO:0006098 (24.8%) "GO:0005829 (24.8%) GO:0016020 (0.4%)" "GO:0004802 (24.8%) GO:0046872 (24.8%) GO:0047896 (0.2%)" pentose-phosphate shunt (24.8%) "cytosol (24.8%) membrane (0.4%)" "transketolase activity (24.8%) metal ion binding (24.8%) formaldehyde transketolase activity (0.2%)" "IPR005474 (12.9%) IPR029061 (12.9%) IPR033247 (12.9%)" "Transketolase, N-terminal (12.9%) Thiamin diphosphate-binding fold (12.9%) Transketolase family (12.9%)" TLANDIFIPKDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.1.13.1 (98.5%) 3.1.-.- (1.5%)" "exoribonuclease II (98.5%) Acting on ester bonds (1.5%)" GO:0006402 (25%) GO:0005829 (24.8%) "GO:0008859 (25.1%) GO:0003723 (25%) GO:0004527 (0.2%)" mRNA catabolic process (25%) cytosol (24.8%) "exoribonuclease II activity (25.1%) RNA binding (25%) exonuclease activity (0.2%)" "IPR012340 (11.9%) IPR040476 (11.9%) IPR001900 (11.7%)" "Nucleic acid-binding, OB-fold (11.9%) RNase II/RNase R, cold shock domain (11.9%) Ribonuclease II/R (11.7%)" VCVMNTPGQNSNAVAELVFGMLVYGVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (47.1%) GO:0016616 (35.3%) GO:0004617 (11.8%)" "NAD binding (47.1%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (35.3%) phosphoglycerate dehydrogenase activity (11.8%)" "IPR006139 (25%) IPR006140 (25%) IPR029752 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 (25%)" SDLFNVNAGIVK Bacteria Bacteria "1.1.1.37 (99.8%) 1.-.-.- (0.1%) 1.1.1.- (0.1%)" "malate dehydrogenase (99.8%) Oxidoreductases (0.1%) With NAD(+) or NADP(+) as acceptor (0.1%)" "GO:0006099 (25%) GO:0006108 (24.6%) GO:0019752 (0.1%)" "GO:0005737 (25%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0030060 (25%) GO:0016491 (0.1%) GO:0016615 (0%)" "tricarboxylic acid cycle (25%) malate metabolic process (24.6%) carboxylic acid metabolic process (0.1%)" "cytoplasm (25%) cytosol (0%) membrane (0%)" "L-malate dehydrogenase (NAD+) activity (25%) oxidoreductase activity (0.1%) malate dehydrogenase activity (0%)" "IPR001236 (13.9%) IPR036291 (13.8%) IPR001252 (13.6%)" "Lactate/malate dehydrogenase, N-terminal (13.9%) NAD(P)-binding domain superfamily (13.8%) Malate dehydrogenase, active site (13.6%)" MVGSHTGSGLLAEGDTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR006311 (20%) IPR013022 (20%) IPR019546 (20%)" "Twin-arginine translocation pathway, signal sequence (20%) Xylose isomerase-like, TIM barrel domain (20%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (20%)" AKLHDYYKDEVVKK root "GO:0006412 (16.3%) GO:0000027 (0.1%) GO:0002181 (0.1%)" "GO:0005840 (17.5%) GO:1990904 (16.2%) GO:0005829 (0.2%)" "GO:0000049 (16.5%) GO:0019843 (16.5%) GO:0003735 (16.3%)" "translation (16.3%) ribosomal large subunit assembly (0.1%) cytoplasmic translation (0.1%)" "ribosome (17.5%) ribonucleoprotein complex (16.2%) cytosol (0.2%)" "tRNA binding (16.5%) rRNA binding (16.5%) structural constituent of ribosome (16.3%)" "IPR022803 (17.1%) IPR031310 (16.8%) IPR002132 (16.5%)" "Large ribosomal subunit protein uL5 domain superfamily (17.1%) Large ribosomal subunit protein uL5, N-terminal (16.8%) Large ribosomal subunit protein uL5 (16.5%)" FASYELVPTDVQEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" ADMDAETAPK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006355 (32.3%) GO:0010212 (0%)" GO:0005829 (33.6%) GO:0003677 (34%) "regulation of DNA-templated transcription (32.3%) response to ionizing radiation (0%)" cytosol (33.6%) DNA binding (34%) "IPR048300 (17%) IPR026564 (17%) IPR029072 (17%)" "TACO1/YebC-like, second and third domains (17%) Transcriptional regulator TACO1-like, domain 3 (17%) YebC-like (17%)" NVFLDKNDEICGYEFVHMGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae LSQGWSPLQHVYFETR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.7%) GO:0006516 (19.7%)" GO:0005829 (19.7%) "GO:0000224 (19.7%) GO:0030246 (19.7%) GO:0016798 (1.3%)" "carbohydrate metabolic process (19.7%) glycoprotein catabolic process (19.7%)" cytosol (19.7%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.7%) carbohydrate binding (19.7%) hydrolase activity, acting on glycosyl bonds (1.3%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" AEAEAANAPAEEAPAAEATEAPAEA Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" KTLKEQGTPEIR root 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (20%) GO:0016052 (19.9%) GO:0006018 (18.6%)" "GO:0005737 (19.8%) GO:0005829 (0.2%) GO:0016020 (0.1%)" "GO:0004139 (20%) GO:0016829 (0.5%) GO:0004645 (0.1%)" "deoxyribonucleotide catabolic process (20%) carbohydrate catabolic process (19.9%) 2-deoxyribose 1-phosphate catabolic process (18.6%)" "cytoplasm (19.8%) cytosol (0.2%) membrane (0.1%)" "deoxyribose-phosphate aldolase activity (20%) lyase activity (0.5%) 1,4-alpha-oligoglucan phosphorylase activity (0.1%)" "IPR002915 (25.1%) IPR011343 (25.1%) IPR013785 (25.1%)" "DeoC/FbaB/LacD aldolase (25.1%) Deoxyribose-phosphate aldolase (25.1%) Aldolase-type TIM barrel (25.1%)" QMNYSEYESDQFKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) GO:0042777 (24.1%) "GO:0005524 (24.1%) GO:0046933 (24.1%) GO:0046961 (24.1%)" proton motive force-driven plasma membrane ATP synthesis (24.1%) "ATP binding (24.1%) proton-transporting ATP synthase activity, rotational mechanism (24.1%) proton-transporting ATPase activity, rotational mechanism (24.1%)" "IPR000194 (14.3%) IPR004100 (14.3%) IPR020003 (14.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (14.3%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (14.3%)" VTFDPAGRPGPFTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011467 (50%) IPR013783 (50%)" "Protein of unknown function DUF1573 (50%) Immunoglobulin-like fold (50%)" TLDADCELLEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.2.1 (100%) pantoate--beta-alanine ligase (AMP-forming) (100%) GO:0015940 (25%) GO:0005829 (25%) "GO:0004592 (25%) GO:0005524 (25%)" pantothenate biosynthetic process (25%) cytosol (25%) "pantoate-beta-alanine ligase activity (25%) ATP binding (25%)" "IPR003721 (33.3%) IPR014729 (33.3%) IPR042176 (33.3%)" "Pantoate-beta-alanine ligase (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (33.3%) Pantoate-beta-alanine ligase, C-terminal domain (33.3%)" RAQAVVNALVKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (25%) IPR006665 (25%) IPR036737 (25%)" "Outer membrane protein, bacterial (25%) OmpA-like domain (25%) OmpA-like domain superfamily (25%)" IKALWPEQTATTGDYR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.5.2.17 (100%) hydroxyisourate hydrolase (100%) "GO:0006144 (33.8%) GO:0051289 (0.3%)" "GO:0042597 (31.8%) GO:0032991 (0.3%)" "GO:0033971 (32.8%) GO:0016787 (0.7%) GO:0042802 (0.3%)" "purine nucleobase metabolic process (33.8%) protein homotetramerization (0.3%)" "periplasmic space (31.8%) protein-containing complex (0.3%)" "hydroxyisourate hydrolase activity (32.8%) hydrolase activity (0.7%) identical protein binding (0.3%)" "IPR023416 (17.1%) IPR036817 (17.1%) IPR000895 (17%)" "Transthyretin/hydroxyisourate hydrolase domain (17.1%) Transthyretin/hydroxyisourate hydrolase domain superfamily (17.1%) Transthyretin/hydroxyisourate hydrolase (17%)" LYDTYEVLHK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (50%) GO:0003824 (20.5%) GO:0043758 (15.9%)" "ATP binding (50%) catalytic activity (20.5%) acetate-CoA ligase (ADP-forming) activity (15.9%)" "IPR013815 (19.3%) IPR003781 (18.4%) IPR016102 (18.4%)" "ATP-grasp fold, subdomain 1 (19.3%) CoA-binding (18.4%) Succinyl-CoA synthetase-like (18.4%)" VLEQGDTKDAEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) "IPR004155 (25%) IPR010496 (25%) IPR011989 (25%)" "PBS lyase HEAT-like repeat (25%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (25%) Armadillo-like helical (25%)" TVAVEHAEPVYLR Bacteria Bacteria "2.3.1.234 (82.6%) 3.4.-.- (17.4%)" "N(6)-L-threonylcarbamoyladenine synthase (82.6%) Acting on peptide bonds (peptidases) (17.4%)" "GO:0002949 (34.6%) GO:0006508 (2.9%) GO:0008033 (0.1%)" "GO:0005829 (34.3%) GO:0000408 (0.1%)" "GO:0016740 (20.4%) GO:0016746 (4.4%) GO:0008233 (2.9%)" "tRNA threonylcarbamoyladenosine modification (34.6%) proteolysis (2.9%) tRNA processing (0.1%)" "cytosol (34.3%) EKC/KEOPS complex (0.1%)" "transferase activity (20.4%) acyltransferase activity (4.4%) peptidase activity (2.9%)" "IPR043129 (33.8%) IPR022496 (33.2%) IPR000905 (33%)" "ATPase, nucleotide binding domain (33.8%) tRNA threonylcarbamoyl adenosine modification protein TsaB (33.2%) Gcp-like domain (33%)" SDEDIAPEVVAADAIPADK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (25%) IPR015824 (25%) IPR015911 (25%)" "Phosphoglycerate kinase (25%) Phosphoglycerate kinase, N-terminal (25%) Phosphoglycerate kinase, conserved site (25%)" FGSGWAWLVLKDGK root 1.15.1.1 (100%) superoxide dismutase (100%) GO:0005737 (30.5%) "GO:0004784 (34.7%) GO:0030145 (18.5%) GO:0046872 (13.5%)" cytoplasm (30.5%) "superoxide dismutase activity (34.7%) manganese ion binding (18.5%) metal ion binding (13.5%)" "IPR019832 (17.1%) IPR001189 (16.9%) IPR019831 (16.9%)" "Manganese/iron superoxide dismutase, C-terminal (17.1%) Manganese/iron superoxide dismutase (16.9%) Manganese/iron superoxide dismutase, N-terminal (16.9%)" RNDEIASVCK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (12.6%) GO:0006261 (11.8%)" "GO:0005737 (12.6%) GO:0009330 (12.6%) GO:0005694 (12.2%)" "GO:0003677 (12.6%) GO:0005524 (12.6%) GO:0034335 (11.8%)" "DNA topological change (12.6%) DNA-templated DNA replication (11.8%)" "cytoplasm (12.6%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.6%) chromosome (12.2%)" "DNA binding (12.6%) ATP binding (12.6%) DNA negative supercoiling activity (11.8%)" "IPR006691 (12.7%) IPR035516 (12.7%) IPR050220 (12.7%)" "DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.7%) DNA gyrase/topoisomerase IV, subunit A, C-terminal (12.7%) Type II DNA Topoisomerases (12.7%)" AAILAEEERVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR007139 (100%) Protein of unknown function DUF349 (100%) FYINSAPAYKPYVTQLITTDAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.17 (100%) 5-dehydro-4-deoxy-D-glucuronate isomerase (100%) "GO:0019698 (19.9%) GO:0042840 (19.9%) GO:0045490 (19.9%)" "GO:0008270 (19.9%) GO:0008697 (19.9%) GO:0016853 (0.5%)" "D-galacturonate catabolic process (19.9%) D-glucuronate catabolic process (19.9%) pectin catabolic process (19.9%)" "zinc ion binding (19.9%) 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity (19.9%) isomerase activity (0.5%)" "IPR007045 (20%) IPR011051 (20%) IPR014710 (20%)" "5-keto 4-deoxyuronate isomerase (20%) RmlC-like cupin domain superfamily (20%) RmlC-like jelly roll fold (20%)" QLDGLGPNGETIMDYSIYDAIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016740 (100%) transferase activity (100%) "IPR029044 (93.8%) IPR005835 (6.3%)" "Nucleotide-diphospho-sugar transferases (93.8%) Nucleotidyl transferase domain (6.3%)" ITDIMFNGTDEDLRQTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0006633 (7.8%) GO:0005829 (7.8%) "GO:0004314 (82.2%) GO:0016746 (1.6%) GO:0016740 (0.8%)" fatty acid biosynthetic process (7.8%) cytosol (7.8%) "[acyl-carrier-protein] S-malonyltransferase activity (82.2%) acyltransferase activity (1.6%) transferase activity (0.8%)" "IPR001227 (14.4%) IPR014043 (14.4%) IPR016035 (14.4%)" "Acyl transferase domain superfamily (14.4%) Acyl transferase domain (14.4%) Acyl transferase/acyl hydrolase/lysophospholipase (14.4%)" KYTEYQQEQANLPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" EYCHEENDEDLRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8%) IPR012162 (8%) IPR015847 (8%)" "Exoribonuclease, phosphorolytic domain 1 (8%) Polyribonucleotide nucleotidyltransferase (8%) Exoribonuclease, phosphorolytic domain 2 (8%)" TSPAHGTAYDIAGK Bacteria Bacteria "1.1.1.262 (97.5%) 1.1.1.408 (2.5%)" "4-hydroxythreonine-4-phosphate dehydrogenase (97.5%) 4-phospho-D-threonate 3-dehydrogenase (2.5%)" GO:0008615 (0.2%) GO:0005737 (0.2%) "GO:0046872 (33.1%) GO:0051287 (33.1%) GO:0050570 (20.7%)" pyridoxine biosynthetic process (0.2%) cytoplasm (0.2%) "metal ion binding (33.1%) NAD binding (33.1%) 4-hydroxythreonine-4-phosphate dehydrogenase activity (20.7%)" IPR005255 (100%) PdxA family (100%) YGGINEIDAVVFPLKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0033103 (50%) GO:0033104 (50%) protein secretion by the type VI secretion system (50%) type VI protein secretion system complex (50%) IPR035576 (100%) Type VI secretion system TssC (100%) IDELGIPMKDMWWYLDTRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20%) GO:0005737 (20%) "GO:0003676 (20%) GO:0004816 (20%) GO:0005524 (20%)" asparaginyl-tRNA aminoacylation (20%) cytoplasm (20%) "nucleic acid binding (20%) asparagine-tRNA ligase activity (20%) ATP binding (20%)" "IPR002312 (14.3%) IPR004364 (14.3%) IPR004365 (14.3%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.3%) Aminoacyl-tRNA synthetase, class II (D/K/N) (14.3%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (14.3%)" ANVSQVMHIIGDVAGR root 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (10.9%)" "GO:0005737 (11.1%) GO:0002189 (11.1%) GO:0005829 (0%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0016301 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (10.9%)" "cytoplasm (11.1%) ribose phosphate diphosphokinase complex (11.1%) cytosol (0%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) kinase activity (11.1%)" "IPR000836 (16.9%) IPR005946 (16.9%) IPR029057 (16.9%)" "Phosphoribosyltransferase domain (16.9%) Ribose-phosphate pyrophosphokinase (16.9%) Phosphoribosyltransferase-like (16.9%)" GFIEQLEAHCAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.12 (96.7%) 5.4.2.1 (3.3%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (96.7%) Transferred entry: 5.4.2.11 and 5.4.2.12 (3.3%)" "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" TELKDHAPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (7.7%) IPR003029 (7.7%) IPR004087 (7.7%)" "Exoribonuclease, phosphorolytic domain 1 (7.7%) S1 domain (7.7%) K Homology domain (7.7%)" EIEEGLINNQILDVR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (24.5%) GO:0006352 (0.1%) GO:0006879 (0%)" "GO:0000428 (25%) GO:0000345 (0.1%) GO:0005829 (0%)" "GO:0003677 (24.6%) GO:0003899 (24.6%) GO:0016779 (0.3%)" "DNA-templated transcription (24.5%) DNA-templated transcription initiation (0.1%) intracellular iron ion homeostasis (0%)" "DNA-directed RNA polymerase complex (25%) cytosolic DNA-directed RNA polymerase complex (0.1%) cytosol (0%)" "DNA binding (24.6%) DNA-directed RNA polymerase activity (24.6%) nucleotidyltransferase activity (0.3%)" "IPR036161 (33.4%) IPR003716 (33.3%) IPR006110 (33.3%)" "RPB6/omega subunit-like superfamily (33.4%) DNA-directed RNA polymerase, omega subunit (33.3%) RNA polymerase, subunit omega/Rpo6/RPB6 (33.3%)" FGEAIFGADKVLSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" IVIGDADNEIGNGELKIEDYEHVNYVDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006207 (16.5%) GO:0006526 (16.5%) GO:0006541 (16.5%)" "GO:0004088 (16.5%) GO:0005524 (16.5%) GO:0004359 (1.3%)" "'de novo' pyrimidine nucleobase biosynthetic process (16.5%) L-arginine biosynthetic process (16.5%) glutamine metabolic process (16.5%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (16.5%) ATP binding (16.5%) glutaminase activity (1.3%)" "IPR002474 (14.3%) IPR006274 (14.3%) IPR017926 (14.3%)" "Carbamoyl-phosphate synthase small subunit, N-terminal domain (14.3%) Carbamoyl-phosphate synthase, small subunit (14.3%) Glutamine amidotransferase (14.3%)" VGAATEVEMK root "5.6.1.7 (100%) 2.3.1.41 (0%)" "chaperonin ATPase (100%) beta-ketoacyl-[acyl-carrier-protein] synthase I (0%)" "GO:0042026 (17.1%) GO:0009408 (0.4%) GO:0051085 (0%)" "GO:0005737 (16.3%) GO:0009986 (0.4%) GO:0042603 (0.4%)" "GO:0140662 (17.1%) GO:0005524 (17.1%) GO:0016853 (16.7%)" "protein refolding (17.1%) response to heat (0.4%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (16.3%) cell surface (0.4%) capsule (0.4%)" "ATP-dependent protein folding chaperone (17.1%) ATP binding (17.1%) isomerase activity (16.7%)" "IPR001844 (16.8%) IPR027409 (16.8%) IPR002423 (16.8%)" "Chaperonin Cpn60/GroEL (16.8%) GroEL-like apical domain superfamily (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%)" KLLDEAQAGDNIGALLR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (20.5%) GO:0005737 (0.4%) GO:0032045 (0.1%)" "GO:0003746 (21.1%) GO:0005525 (21%) GO:0003924 (19.8%)" "cytosol (20.5%) cytoplasm (0.4%) guanyl-nucleotide exchange factor complex (0.1%)" "translation elongation factor activity (21.1%) GTP binding (21%) GTPase activity (19.8%)" "IPR009000 (8.8%) IPR050055 (8.8%) IPR004160 (8.7%)" "Translation protein, beta-barrel domain superfamily (8.8%) Elongation factor Tu GTPase (8.8%) Translation elongation factor EFTu/EF1A, C-terminal (8.7%)" VLQLEAVACKDWLTNKVDR root 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.1%) GO:0006164 (1.1%)" GO:0005737 (20.1%) "GO:0004642 (20.1%) GO:0046872 (19.8%) GO:0005524 (19.7%)" "'de novo' IMP biosynthetic process (19.1%) purine nucleotide biosynthetic process (1.1%)" cytoplasm (20.1%) "phosphoribosylformylglycinamidine synthase activity (20.1%) metal ion binding (19.8%) ATP binding (19.7%)" "IPR010918 (11.3%) IPR055181 (11.3%) IPR036676 (11.2%)" "PurM-like, C-terminal domain (11.3%) FGAR-AT, PurM N-terminal-like domain (11.3%) PurM-like, C-terminal domain superfamily (11.2%)" YGYIDDVIEPR Pseudomonadati Bacteria Pseudomonadati "6.4.1.3 (55.2%) 6.-.-.- (41.4%) 4.1.1.41 (3.4%)" "propionyl-CoA carboxylase (55.2%) Ligases (41.4%) Transferred entry: 7.2.4.3 (3.4%)" "GO:0015977 (21.7%) GO:0006633 (1.4%)" GO:0009317 (21.7%) "GO:0004658 (23.7%) GO:0003989 (21.7%) GO:0016740 (9.2%)" "carbon fixation (21.7%) fatty acid biosynthetic process (1.4%)" acetyl-CoA carboxylase complex (21.7%) "propionyl-CoA carboxylase activity (23.7%) acetyl-CoA carboxylase activity (21.7%) transferase activity (9.2%)" "IPR034733 (19.9%) IPR051047 (19.9%) IPR011763 (19.8%)" "Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (19.9%) Acyl-CoA Carboxylase Beta Subunit (19.9%) Acetyl-coenzyme A carboxyltransferase, C-terminal (19.8%)" LNYKIDEYTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0051539 (100%) 4 iron, 4 sulfur cluster binding (100%) "IPR007160 (33.3%) IPR017896 (33.3%) IPR050157 (33.3%)" "Domain of unknown function DUF362 (33.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (33.3%) Photosystem I iron-sulfur center (33.3%)" LLKDQQQNQDQNQDKNQDQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (34.8%) IPR019734 (34.8%) IPR051685 (28.3%)" "Tetratricopeptide-like helical domain superfamily (34.8%) Tetratricopeptide repeat (34.8%) Ycf3/AcsC/BcsC/TPR Multifunctional (28.3%)" MPYKGSVENGAYK Bacteria Bacteria "GO:0034220 (19.2%) GO:0006811 (2.8%) GO:0006974 (0.3%)" "GO:0009279 (25.1%) GO:0046930 (25.1%) GO:0016020 (0.3%)" "GO:0015288 (25.1%) GO:0015075 (0.3%) GO:0042802 (0.3%)" "monoatomic ion transmembrane transport (19.2%) monoatomic ion transport (2.8%) DNA damage response (0.3%)" "cell outer membrane (25.1%) pore complex (25.1%) membrane (0.3%)" "porin activity (25.1%) monoatomic ion transmembrane transporter activity (0.3%) identical protein binding (0.3%)" "IPR000498 (13.6%) IPR002368 (13.6%) IPR011250 (13.6%)" "Outer membrane protein OmpA-like, transmembrane domain (13.6%) Outer membrane protein, OmpA (13.6%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (13.6%)" QAPKFDATAVINGHEIVQNFSLDQYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" TGYDLEGKSEDEIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.6%) GO:0005829 (16.6%) "GO:0000049 (16.6%) GO:0000287 (16.6%) GO:0004824 (16.6%)" lysyl-tRNA aminoacylation (16.6%) cytosol (16.6%) "tRNA binding (16.6%) magnesium ion binding (16.6%) lysine-tRNA ligase activity (16.6%)" "IPR002313 (11.8%) IPR004364 (11.8%) IPR004365 (11.8%)" "Lysine-tRNA ligase, class II (11.8%) Aminoacyl-tRNA synthetase, class II (D/K/N) (11.8%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.8%)" KLANQLGCQLEAIVAGSGLEGVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0033539 (33.3%) "GO:0009055 (33.3%) GO:0050660 (33.3%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (33.3%) "electron transfer activity (33.3%) flavin adenine dinucleotide binding (33.3%)" "IPR001308 (16.7%) IPR014729 (16.7%) IPR014730 (16.7%)" "Electron transfer flavoprotein alpha subunit/FixB (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.7%)" GMFPVFCVCAGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000795 (7.8%) IPR005225 (7.8%) IPR027417 (7.8%)" "Translational (tr)-type GTP-binding domain (7.8%) Small GTP-binding domain (7.8%) P-loop containing nucleoside triphosphate hydrolase (7.8%)" YEKVENGEPERK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.5%) GO:0006044 (32.5%)" "GO:0004342 (32.5%) GO:0016853 (2.5%)" "carbohydrate metabolic process (32.5%) N-acetylglucosamine metabolic process (32.5%)" "glucosamine-6-phosphate deaminase activity (32.5%) isomerase activity (2.5%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" ERTGAGMMDCK root GO:0006414 (0.1%) "GO:0005737 (49.4%) GO:0005739 (0%) GO:0005829 (0%)" "GO:0003746 (50.2%) GO:0005085 (0%) GO:0008270 (0%)" translational elongation (0.1%) "cytoplasm (49.4%) mitochondrion (0%) cytosol (0%)" "translation elongation factor activity (50.2%) guanyl-nucleotide exchange factor activity (0%) zinc ion binding (0%)" "IPR001816 (20.1%) IPR018101 (20.1%) IPR009060 (20.1%)" "Translation elongation factor EFTs/EF1B (20.1%) Translation elongation factor Ts, conserved site (20.1%) UBA-like superfamily (20.1%)" SILEALSQAATYNDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.6%) GO:0044210 (11.6%)" "GO:0005829 (11.6%) GO:0097268 (11.3%)" "GO:0003883 (11.6%) GO:0005524 (11.6%) GO:0042802 (11.6%)" "pyrimidine nucleobase biosynthetic process (11.6%) 'de novo' CTP biosynthetic process (11.6%)" "cytosol (11.6%) cytoophidium (11.3%)" "CTP synthase activity (11.6%) ATP binding (11.6%) identical protein binding (11.6%)" "IPR004468 (16.8%) IPR017926 (16.8%) IPR029062 (16.8%)" "CTP synthase (16.8%) Glutamine amidotransferase (16.8%) Class I glutamine amidotransferase-like (16.8%)" CETDFVAK root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0070125 (1.9%) GO:0006281 (0.2%) GO:0006414 (0.1%)" "GO:0005737 (46%) GO:0005739 (2.1%) GO:0009507 (0.1%)" "GO:0003746 (48.9%) GO:0016787 (0.2%) GO:0004521 (0.2%)" "mitochondrial translational elongation (1.9%) DNA repair (0.2%) translational elongation (0.1%)" "cytoplasm (46%) mitochondrion (2.1%) chloroplast (0.1%)" "translation elongation factor activity (48.9%) hydrolase activity (0.2%) RNA endonuclease activity (0.2%)" "IPR014039 (20.4%) IPR001816 (20.4%) IPR036402 (20.3%)" "Translation elongation factor EFTs/EF1B, dimerisation (20.4%) Translation elongation factor EFTs/EF1B (20.4%) Elongation factor Ts, dimerisation domain superfamily (20.3%)" KVGIGHGNLAAMLLREETK Bacteria Bacteria IPR025964 (100%) GGGtGRT protein (100%) GIIHAGVGNGNFHK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.1.1 (100%) asparaginase (100%) GO:0006528 (33.3%) "GO:0042597 (31%) GO:0030313 (2.4%)" GO:0004067 (33.3%) asparagine metabolic process (33.3%) "periplasmic space (31%) cell envelope (2.4%)" asparaginase activity (33.3%) "IPR004550 (11.3%) IPR006034 (11.3%) IPR027473 (11.3%)" "L-asparaginase, type II (11.3%) Asparaginase/glutaminase-like (11.3%) L-asparaginase, C-terminal (11.3%)" EDTGRVDYDQMEEVALR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.8%) GO:0035999 (15.8%) GO:0032259 (8.9%)" GO:0005829 (15.8%) "GO:0004372 (15.8%) GO:0030170 (15.8%) GO:0008168 (8.9%)" "glycine biosynthetic process from serine (15.8%) tetrahydrofolate interconversion (15.8%) methylation (8.9%)" cytosol (15.8%) "glycine hydroxymethyltransferase activity (15.8%) pyridoxal phosphate binding (15.8%) methyltransferase activity (8.9%)" "IPR001085 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Serine hydroxymethyltransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" SQSKEYQESIIPAGSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" HVLVEEINK root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.3%) GO:0043335 (16.3%) GO:0051083 (16.3%)" GO:0016020 (1%) "GO:0003755 (16.3%) GO:0043022 (16.3%) GO:0044183 (16.3%)" "protein transport (16.3%) protein unfolding (16.3%) 'de novo' cotranslational protein folding (16.3%)" membrane (1%) "peptidyl-prolyl cis-trans isomerase activity (16.3%) ribosome binding (16.3%) protein folding chaperone (16.3%)" "IPR005215 (17.9%) IPR008881 (17.9%) IPR027304 (17.9%)" "Trigger factor (17.9%) Trigger factor, ribosome-binding, bacterial (17.9%) Trigger factor/SurA domain superfamily (17.9%)" AGLNLSSYIGENSDHSEFKPGAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR025665 (100%) Outer membrane protein, beta-barrel domain 2 (100%) AYSDKTLAPISDSDLTLNFIIDER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" KSVHEPLQTGLK root "7.1.2.2 (98.2%) 3.6.3.14 (1.8%)" "H(+)-transporting two-sector ATPase (98.2%) Transferred entry: 7.1.2.2 (1.8%)" "GO:0032784 (0.1%) GO:0015986 (0%) GO:0009231 (0%)" "GO:0045259 (19.8%) GO:0005886 (15.5%) GO:0005739 (0.8%)" "GO:0005524 (19.8%) GO:0046933 (19.8%) GO:0043531 (19.8%)" "regulation of DNA-templated transcription elongation (0.1%) proton motive force-driven ATP synthesis (0%) riboflavin biosynthetic process (0%)" "proton-transporting ATP synthase complex (19.8%) plasma membrane (15.5%) mitochondrion (0.8%)" "ATP binding (19.8%) proton-transporting ATP synthase activity, rotational mechanism (19.8%) ADP binding (19.8%)" "IPR005294 (11.2%) IPR027417 (11.2%) IPR000194 (11.2%)" "ATP synthase, F1 complex, alpha subunit (11.2%) P-loop containing nucleoside triphosphate hydrolase (11.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11.2%)" TTTSSMLAHLLK Bacteroidota Bacteria Pseudomonadati Bacteroidota "6.3.2.8 (98.7%) 2.4.1.227 (1.3%)" "UDP-N-acetylmuramate--L-alanine ligase (98.7%) undecaprenyldiphospho-muramoylpentapeptide beta-Nacetylglucosaminyltransferase (1.3%)" "GO:0009252 (12.9%) GO:0008360 (12.7%) GO:0051301 (12.7%)" "GO:0005737 (12.9%) GO:0016020 (9%) GO:0005886 (0.2%)" "GO:0005524 (12.9%) GO:0008763 (12.9%) GO:0050511 (0.2%)" "peptidoglycan biosynthetic process (12.9%) regulation of cell shape (12.7%) cell division (12.7%)" "cytoplasm (12.9%) membrane (9%) plasma membrane (0.2%)" "ATP binding (12.9%) UDP-N-acetylmuramate-L-alanine ligase activity (12.9%) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity (0.2%)" "IPR000713 (14.2%) IPR004101 (14.2%) IPR005758 (14.2%)" "Mur ligase, N-terminal catalytic domain (14.2%) Mur ligase, C-terminal (14.2%) UDP-N-acetylmuramate--L-alanine ligase (14.2%)" ITTTNVDGR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0016740 (100%) transferase activity (100%) "IPR023296 (60%) IPR018337 (40%)" "Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (60%) Cell wall/choline-binding repeat (40%)" SALAAEIEKQKEENLQVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR007139 (100%) Protein of unknown function DUF349 (100%) NFPDKAIDALDEAGSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0034605 (18.4%) GO:0006508 (13.1%)" GO:0005737 (18.4%) "GO:0005524 (18.4%) GO:0016887 (18.4%) GO:0008233 (13.1%)" "cellular response to heat (18.4%) proteolysis (13.1%)" cytoplasm (18.4%) "ATP binding (18.4%) ATP hydrolysis activity (18.4%) peptidase activity (13.1%)" "IPR027417 (8.5%) IPR041546 (8.5%) IPR050130 (8.5%)" "P-loop containing nucleoside triphosphate hydrolase (8.5%) ClpA/ClpB, AAA lid domain (8.5%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.5%)" EVPETALYGVQTLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.7%) GO:0006531 (24.7%)" GO:0005829 (24.7%) "GO:0008797 (24.7%) GO:0016853 (1.2%)" "tricarboxylic acid cycle (24.7%) aspartate metabolic process (24.7%)" cytosol (24.7%) "aspartate ammonia-lyase activity (24.7%) isomerase activity (1.2%)" "IPR000362 (12.7%) IPR008948 (12.7%) IPR018951 (12.7%)" "Fumarate lyase family (12.7%) L-Aspartase-like (12.7%) Fumarase C, C-terminal (12.7%)" SGAPIFLFQANTPYDVYLNGLDKQEIANLKDLQVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis SVDPYLDKEAIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0015031 (19.7%) GO:0055085 (19.7%) GO:0015891 (10.6%)" "GO:0098797 (19.7%) GO:0030288 (10.6%)" GO:0031992 (19.7%) "protein transport (19.7%) transmembrane transport (19.7%) siderophore transport (10.6%)" "plasma membrane protein complex (19.7%) outer membrane-bounded periplasmic space (10.6%)" energy transducer activity (19.7%) "IPR006260 (28%) IPR037682 (28%) IPR051045 (28%)" "TonB/TolA, C-terminal (28%) TonB, C-terminal (28%) TonB-dependent transporter energy transducer (28%)" TLMELEEEGYHVIPTAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.21 (100%) phosphoribosylglycinamide formyltransferase 2 (100%) GO:0006189 (16.7%) GO:0005829 (16.7%) "GO:0000287 (16.7%) GO:0004644 (16.7%) GO:0005524 (16.7%)" 'de novo' IMP biosynthetic process (16.7%) cytosol (16.7%) "magnesium ion binding (16.7%) phosphoribosylglycinamide formyltransferase activity (16.7%) ATP binding (16.7%)" "IPR003135 (12.5%) IPR005862 (12.5%) IPR011054 (12.5%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.5%) Formate-dependent phosphoribosylglycinamide formyltransferase (12.5%) Rudiment single hybrid motif (12.5%)" YYGSDKPDIR root "6.1.1.12 (78%) 6.1.1.23 (21.7%) 6.1.1.- (0.3%)" "aspartate--tRNA ligase (78%) aspartate--tRNA(Asn) ligase (21.7%) Ligases forming aminoacyl-tRNA and related compounds (0.3%)" "GO:0006422 (19%) GO:0006430 (0.2%) GO:0006418 (0.1%)" "GO:0005737 (18.4%) GO:0005739 (0.6%)" "GO:0005524 (19.1%) GO:0004815 (19%) GO:0003676 (18.5%)" "aspartyl-tRNA aminoacylation (19%) lysyl-tRNA aminoacylation (0.2%) tRNA aminoacylation for protein translation (0.1%)" "cytoplasm (18.4%) mitochondrion (0.6%)" "ATP binding (19.1%) aspartate-tRNA ligase activity (19%) nucleic acid binding (18.5%)" "IPR004364 (9.3%) IPR045864 (9.2%) IPR004115 (9.2%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (9.3%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (9.2%) GAD-like domain superfamily (9.2%)" TQCMAYIAQAGGQIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "6.3.1.2 (66.7%) 6.3.1.- (33.3%)" "glutamine synthetase (66.7%) Acid--ammonia (or amine) ligases (amide synthases) (33.3%)" "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" VGTSVKFDHTTEPTAEQMTYVDGYSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (46.9%) IPR024302 (46.9%) IPR041662 (6.3%)" "Tetratricopeptide-like helical domain superfamily (46.9%) SusD-like (46.9%) SusD-like 2 (6.3%)" MNQIVEHEANPAILGMVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR005996 (25%) IPR016082 (25%) IPR018038 (25%)" "Large ribosomal subunit protein uL30, bacteria (25%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (25%) Large ribosomal subunit protein uL30, conserved site (25%)" YNNGDRPQRPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (31.3%) "GO:0003723 (31.3%) GO:0120159 (31.3%) GO:0016829 (6.3%)" enzyme-directed rRNA pseudouridine synthesis (31.3%) "RNA binding (31.3%) rRNA pseudouridine synthase activity (31.3%) lyase activity (6.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" GGVIGGGSGAALGAIIGGIAGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (20%) IPR006665 (20%) IPR036737 (20%)" "Outer membrane protein, bacterial (20%) OmpA-like domain (20%) OmpA-like domain superfamily (20%)" GAFDEAAAEEKFQAWLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" GHNSMLVLRPADVVETTVAWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" SDEEAINAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.1%) "GO:0022627 (32.7%) GO:0005840 (1.1%)" GO:0003735 (33.1%) translation (33.1%) "cytosolic small ribosomal subunit (32.7%) ribosome (1.1%)" structural constituent of ribosome (33.1%) "IPR001865 (25.2%) IPR023591 (25.2%) IPR005706 (24.9%)" "Small ribosomal subunit protein uS2 (25.2%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.2%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (24.9%)" EQLVKENDIKVEQDDVINMAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.3%) GO:0043335 (16.3%) GO:0051083 (16.3%)" "GO:0003755 (16.3%) GO:0043022 (16.3%) GO:0044183 (16.3%)" "protein transport (16.3%) protein unfolding (16.3%) 'de novo' cotranslational protein folding (16.3%)" "peptidyl-prolyl cis-trans isomerase activity (16.3%) ribosome binding (16.3%) protein folding chaperone (16.3%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" SQLIDKIAAGADISK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0030261 (11.1%) GO:0006270 (11%) GO:0006351 (11%)" "GO:0005829 (11.1%) GO:1990103 (11%) GO:1990178 (11%)" "GO:0003677 (11.4%) GO:0030527 (11.2%) GO:0042802 (11%)" "chromosome condensation (11.1%) DNA replication initiation (11%) DNA-templated transcription (11%)" "cytosol (11.1%) DnaA-HU complex (11%) HU-DNA complex (11%)" "DNA binding (11.4%) structural constituent of chromatin (11.2%) identical protein binding (11%)" "IPR000119 (33.7%) IPR010992 (33.5%) IPR020816 (32.7%)" "Histone-like DNA-binding protein (33.7%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.5%) Histone-like DNA-binding protein, conserved site (32.7%)" DVQELGYINNKPLVFDNEPAR AAIERDFGSVDNFKAEFEK root 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0019430 (0.1%) GO:0006801 (0.1%) GO:0006979 (0.1%)" "GO:0005737 (33%) GO:0005829 (0.1%)" "GO:0004784 (33%) GO:0030145 (31.9%) GO:0046872 (0.9%)" "removal of superoxide radicals (0.1%) superoxide metabolic process (0.1%) response to oxidative stress (0.1%)" "cytoplasm (33%) cytosol (0.1%)" "superoxide dismutase activity (33%) manganese ion binding (31.9%) metal ion binding (0.9%)" "IPR036314 (16.8%) IPR001189 (16.8%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase, C-terminal domain superfamily (16.8%) Manganese/iron superoxide dismutase (16.8%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" MYPFKFNPILK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (32.4%) "GO:0004476 (33.8%) GO:0008270 (33.8%)" carbohydrate metabolic process (32.4%) "mannose-6-phosphate isomerase activity (33.8%) zinc ion binding (33.8%)" "IPR011051 (17%) IPR014710 (17%) IPR046457 (17%)" "RmlC-like cupin domain superfamily (17%) RmlC-like jelly roll fold (17%) Phosphomannose isomerase type I, catalytic domain (17%)" SCIDSGFSSVMIDGSHLPYEENVALTKK Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.5%) GO:0030388 (24.5%) GO:0005975 (0.5%)" GO:0016020 (0.3%) "GO:0008270 (25%) GO:0004332 (24.5%) GO:0016832 (0.5%)" "glycolytic process (24.5%) fructose 1,6-bisphosphate metabolic process (24.5%) carbohydrate metabolic process (0.5%)" membrane (0.3%) "zinc ion binding (25%) fructose-bisphosphate aldolase activity (24.5%) aldehyde-lyase activity (0.5%)" "IPR000771 (25.1%) IPR013785 (25.1%) IPR050246 (25.1%)" "Fructose-bisphosphate aldolase, class-II (25.1%) Aldolase-type TIM barrel (25.1%) Class II Fructose-bisphosphate Aldolase (25.1%)" GGMTSHAAVVAR root "2.7.9.1 (100%) 2.7.-.- (0%)" "pyruvate, phosphate dikinase (100%) Transferring phosphorus-containing groups (0%)" "GO:0015979 (1.9%) GO:0006396 (0%) GO:0009909 (0%)" "GO:0005737 (0.9%) GO:0009507 (0.1%) GO:0005829 (0%)" "GO:0050242 (24.4%) GO:0016301 (24.4%) GO:0005524 (23.9%)" "photosynthesis (1.9%) RNA processing (0%) regulation of flower development (0%)" "cytoplasm (0.9%) chloroplast (0.1%) cytosol (0%)" "pyruvate, phosphate dikinase activity (24.4%) kinase activity (24.4%) ATP binding (23.9%)" "IPR008279 (10.3%) IPR018274 (10.3%) IPR010121 (10.3%)" "PEP-utilising enzyme, mobile domain (10.3%) PEP-utilising enzyme, active site (10.3%) Pyruvate, phosphate dikinase (10.3%)" SGPYLLSPQKDYECMGDVPNVVFPCAALHDPETKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.1.320 (100%) 1,4-beta-mannosyl-N-acetylglucosamine phosphorylase (100%) "GO:0016757 (66.7%) GO:0016798 (33.3%)" "glycosyltransferase activity (66.7%) hydrolase activity, acting on glycosyl bonds (33.3%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" KYIDECGAANFFGIK root 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (18.9%) GO:0009098 (18.9%) GO:0009099 (18.9%)" "GO:0004084 (17.6%) GO:0052654 (5.7%) GO:0052655 (5.7%)" "isoleucine biosynthetic process (18.9%) L-leucine biosynthetic process (18.9%) L-valine biosynthetic process (18.9%)" "branched-chain-amino-acid transaminase activity (17.6%) L-leucine-2-oxoglutarate transaminase activity (5.7%) L-valine-2-oxoglutarate transaminase activity (5.7%)" "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" MKTVSNQELTIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005975 (33.3%) "GO:0016853 (33.3%) GO:0030246 (33.3%)" carbohydrate metabolic process (33.3%) "isomerase activity (33.3%) carbohydrate binding (33.3%)" "IPR008183 (25%) IPR011013 (25%) IPR014718 (25%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (25%) Galactose mutarotase-like domain superfamily (25%) Glycoside hydrolase-type carbohydrate-binding (25%)" IEQAPGQHGAR root "GO:0042274 (19.7%) GO:0006412 (19.7%) GO:0006353 (0.1%)" "GO:0015935 (19.7%) GO:0005840 (0.6%) GO:0005737 (0%)" "GO:0019843 (19.9%) GO:0003735 (19.7%) GO:0016787 (0.2%)" "ribosomal small subunit biogenesis (19.7%) translation (19.7%) DNA-templated transcription termination (0.1%)" "small ribosomal subunit (19.7%) ribosome (0.6%) cytoplasm (0%)" "rRNA binding (19.9%) structural constituent of ribosome (19.7%) hydrolase activity (0.2%)" "IPR001912 (16.8%) IPR002942 (16.7%) IPR018079 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.8%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, conserved site (16.7%)" AFGGALGGFTTGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (14.1%) GO:0030148 (14.1%) GO:0006567 (0.1%)" "GO:0005829 (14.3%) GO:0016020 (14.1%)" "GO:0008890 (14.3%) GO:0030170 (14.3%) GO:0004758 (8.2%)" "L-threonine catabolic process to glycine (14.1%) sphingolipid biosynthetic process (14.1%) L-threonine catabolic process (0.1%)" "cytosol (14.3%) membrane (14.1%)" "glycine C-acetyltransferase activity (14.3%) pyridoxal phosphate binding (14.3%) serine C-palmitoyltransferase activity (8.2%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015424 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase (16.7%)" TKLEKDVMAQR Bacteria Bacteria "GO:0050821 (24.5%) GO:0061077 (1.2%) GO:0006457 (0.2%)" "GO:0005829 (24.5%) GO:0042597 (23%) GO:0030288 (0.2%)" "GO:0051082 (24.5%) GO:0003677 (1.3%) GO:0001530 (0.2%)" "protein stabilization (24.5%) obsolete chaperone-mediated protein folding (1.2%) protein folding (0.2%)" "cytosol (24.5%) periplasmic space (23%) outer membrane-bounded periplasmic space (0.2%)" "unfolded protein binding (24.5%) DNA binding (1.3%) lipopolysaccharide binding (0.2%)" "IPR024930 (50.2%) IPR005632 (49.8%)" "Skp domain superfamily (50.2%) Chaperone protein Skp (49.8%)" LFANPYNAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.4.1.3 (62.5%) 6.-.-.- (37.5%)" "propionyl-CoA carboxylase (62.5%) Ligases (37.5%)" GO:0015977 (22%) GO:0009317 (22%) "GO:0004658 (24.6%) GO:0003989 (22%) GO:0016740 (8.8%)" carbon fixation (22%) acetyl-CoA carboxylase complex (22%) "propionyl-CoA carboxylase activity (24.6%) acetyl-CoA carboxylase activity (22%) transferase activity (8.8%)" "IPR029045 (20.1%) IPR034733 (20.1%) IPR051047 (20.1%)" "ClpP/crotonase-like domain superfamily (20.1%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.1%) Acyl-CoA Carboxylase Beta Subunit (20.1%)" EIPGFEVNNPQGAFYLFPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" TNAEVVFMGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (30%) GO:1902600 (30%) GO:0006811 (0.8%)" "GO:0005524 (30.8%) GO:0016787 (8.3%)" "ATP metabolic process (30%) proton transmembrane transport (30%) monoatomic ion transport (0.8%)" "ATP binding (30.8%) hydrolase activity (8.3%)" "IPR000194 (20.2%) IPR022879 (20.2%) IPR027417 (20.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.2%) V-type ATP synthase regulatory subunit B/beta (20.2%) P-loop containing nucleoside triphosphate hydrolase (20.2%)" RYPAVNPIESYSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (22.9%) GO:0046034 (1.4%)" "GO:0005524 (24.3%) GO:0046961 (24.3%) GO:0046933 (22.9%)" "proton motive force-driven plasma membrane ATP synthesis (22.9%) ATP metabolic process (1.4%)" "ATP binding (24.3%) proton-transporting ATPase activity, rotational mechanism (24.3%) proton-transporting ATP synthase activity, rotational mechanism (22.9%)" "IPR000194 (13.9%) IPR004100 (13.9%) IPR020003 (13.9%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (13.9%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (13.9%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (13.9%)" VRIDMENICTHINRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR006015 (34.4%) IPR006016 (34.4%) IPR014729 (31.3%)" "Universal stress protein A family (34.4%) UspA (34.4%) Rossmann-like alpha/beta/alpha sandwich fold (31.3%)" AYENMKNEIQTYENNLGFLTSSSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR007139 (100%) Protein of unknown function DUF349 (100%) EDQNLSDYAIIYNTLQKDPSNSEKEAVLYIYR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (17.5%) GO:0006508 (6.3%)" GO:0000428 (17.5%) "GO:0003677 (17.5%) GO:0003899 (17.5%) GO:0032549 (17.5%)" "DNA-templated transcription (17.5%) proteolysis (6.3%)" DNA-directed RNA polymerase complex (17.5%) "DNA binding (17.5%) DNA-directed RNA polymerase activity (17.5%) ribonucleoside binding (17.5%)" "IPR007120 (7.5%) IPR007121 (7.5%) IPR007641 (7.5%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.5%) RNA polymerase, beta subunit, conserved site (7.5%) RNA polymerase Rpb2, domain 7 (7.5%)" GIVELLKGENATK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae IPR005531 (100%) Alkaline shock protein Asp23 (100%) KADSTLEPLPAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.2%) GO:0005737 (14.2%) "GO:0000049 (14.2%) GO:0002161 (14.2%) GO:0004813 (14.2%)" alanyl-tRNA aminoacylation (14.2%) cytoplasm (14.2%) "tRNA binding (14.2%) aminoacyl-tRNA deacylase activity (14.2%) alanine-tRNA ligase activity (14.2%)" "IPR002318 (9.1%) IPR003156 (9.1%) IPR009000 (9.1%)" "Alanine-tRNA ligase, class IIc (9.1%) DHHA1 domain (9.1%) Translation protein, beta-barrel domain superfamily (9.1%)" SIQDYPKPGILFR root 2.4.2.7 (100%) adenine phosphoribosyltransferase (100%) "GO:0006166 (18.2%) GO:0006168 (18%) GO:0044209 (17.9%)" "GO:0005829 (13.7%) GO:0005737 (4.5%)" "GO:0003999 (18.3%) GO:0002055 (4.5%) GO:0016208 (4.5%)" "purine ribonucleoside salvage (18.2%) adenine salvage (18%) AMP salvage (17.9%)" "cytosol (13.7%) cytoplasm (4.5%)" "adenine phosphoribosyltransferase activity (18.3%) adenine binding (4.5%) AMP binding (4.5%)" "IPR029057 (25.3%) IPR000836 (24.9%) IPR005764 (24.7%)" "Phosphoribosyltransferase-like (25.3%) Phosphoribosyltransferase domain (24.9%) Adenine phosphoribosyl transferase (24.7%)" NRLDLDNEALAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" TGTPVMIPAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" AETHNFPTTVEPFNGAATGTGGEIRDR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.1%) GO:0006164 (0.9%)" GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" "'de novo' IMP biosynthetic process (19.1%) purine nucleotide biosynthetic process (0.9%)" cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010918 (11.2%) IPR041609 (11.2%) IPR055181 (11.2%)" "PurM-like, C-terminal domain (11.2%) Phosphoribosylformylglycinamidine synthase, linker domain (11.2%) FGAR-AT, PurM N-terminal-like domain (11.2%)" KTFWSDLRIPGEANELNVELEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (16.8%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (16.8%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" TEYQTPEGEALRDDKNFSYVACWK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (11.4%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (11.4%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" STDFRGCANTSIYDSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.1.- (93.3%) 1.2.1.12 (6.7%)" "With NAD(+) or NADP(+) as acceptor (93.3%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (6.7%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (11.9%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (11.9%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" VVPTDSADSWLVYGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0009409 (10.1%) GO:0010467 (10.1%) GO:0000027 (9.7%)" "GO:0005829 (10.1%) GO:1990904 (10.1%)" "GO:0003924 (10.1%) GO:0005525 (10.1%) GO:0000049 (9.7%)" "response to cold (10.1%) gene expression (10.1%) ribosomal large subunit assembly (9.7%)" "cytosol (10.1%) ribonucleoprotein complex (10.1%)" "GTPase activity (10.1%) GTP binding (10.1%) tRNA binding (9.7%)" "IPR000640 (6.8%) IPR004161 (6.8%) IPR009000 (6.8%)" "Elongation factor EFG, domain V-like (6.8%) Translation elongation factor EFTu-like, domain 2 (6.8%) Translation protein, beta-barrel domain superfamily (6.8%)" ADIINYIQQNEIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" TDMENLVDEIAAEVKE Bacteroidota Bacteria Pseudomonadati Bacteroidota IPR024623 (100%) Uncharacterised protein family YtxH (100%) AVAFGECLQPEYKEYQTQVKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (14.7%) GO:0035999 (14.7%) GO:0032259 (12.6%)" GO:0005829 (14.7%) "GO:0004372 (14.7%) GO:0030170 (14.7%) GO:0008168 (12.6%)" "glycine biosynthetic process from serine (14.7%) tetrahydrofolate interconversion (14.7%) methylation (12.6%)" cytosol (14.7%) "glycine hydroxymethyltransferase activity (14.7%) pyridoxal phosphate binding (14.7%) methyltransferase activity (12.6%)" "IPR001085 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Serine hydroxymethyltransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" NDEPQSASRPFSASR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" GYAQLLLTNIYGHQIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" IAAQAEKDKLEENDIRIPLDENSNDVTAFLAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (16.7%) "GO:0000287 (16.7%) GO:0004743 (16.7%) GO:0005524 (16.7%)" response to stress (16.7%) "magnesium ion binding (16.7%) pyruvate kinase activity (16.7%) ATP binding (16.7%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" IAELDDAVAGLSQNVSELTAENEAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae LIGGQIAPDHGEILFDGENIPAMSR root "3.6.3.- (62.5%) 7.6.2.- (37.5%)" "Acting on acid anhydrides; catalyzing transmembrane movement of substances (62.5%) Linked to the hydrolysis of a nucleoside triphosphate (37.5%)" "GO:0006869 (29.9%) GO:0015914 (0.3%) GO:0120010 (0.3%)" "GO:0005886 (1%) GO:0016020 (0.3%) GO:1990531 (0.3%)" "GO:0005524 (34.2%) GO:0016887 (32.9%) GO:0016787 (0.3%)" "lipid transport (29.9%) phospholipid transport (0.3%) intermembrane phospholipid transfer (0.3%)" "plasma membrane (1%) membrane (0.3%) phospholipid-translocating ATPase complex (0.3%)" "ATP binding (34.2%) ATP hydrolysis activity (32.9%) hydrolase activity (0.3%)" "IPR003439 (25.5%) IPR027417 (25.5%) IPR003593 (24.5%)" "ABC transporter-like, ATP-binding domain (25.5%) P-loop containing nucleoside triphosphate hydrolase (25.5%) AAA+ ATPase domain (24.5%)" ARKPGSIGACSYPAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0022625 (25%) GO:0005840 (0.1%)" "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) "cytosolic large ribosomal subunit (25%) ribosome (0.1%)" "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" RLLIGDDEHGWDDEGVFNYEGGCYAK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.7%) GO:0005829 (17.7%) "GO:0004612 (17.7%) GO:0005524 (17.7%) GO:0046872 (17.4%)" gluconeogenesis (17.7%) cytosol (17.7%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.7%) ATP binding (17.7%) metal ion binding (17.4%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" EHIPVLVYGPK root 5.4.2.7 (100%) phosphopentomutase (100%) "GO:0043094 (13.3%) GO:0009117 (13.3%) GO:0006018 (12.2%)" "GO:0005829 (13.3%) GO:0005737 (0%)" "GO:0000287 (13.3%) GO:0008973 (13.3%) GO:0030145 (12.2%)" "metabolic compound salvage (13.3%) nucleotide metabolic process (13.3%) 2-deoxyribose 1-phosphate catabolic process (12.2%)" "cytosol (13.3%) cytoplasm (0%)" "magnesium ion binding (13.3%) phosphopentomutase activity (13.3%) manganese ion binding (12.2%)" "IPR006124 (25.3%) IPR010045 (25.3%) IPR017850 (25.3%)" "Metalloenzyme (25.3%) Phosphopentomutase (25.3%) Alkaline-phosphatase-like, core domain superfamily (25.3%)" AHSESIWVETERPISIEEAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000534 (20%) IPR005986 (20%) IPR012080 (20%)" "Semialdehyde dehydrogenase, NAD-binding (20%) Aspartate-semialdehyde dehydrogenase, beta-type (20%) Aspartate-semialdehyde dehydrogenase (20%)" VRDVYNINNEKLVMVATDR Pseudomonadati Bacteria Pseudomonadati 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) VFQTHSPVVDSISVKR root "GO:0006412 (31.8%) GO:0000027 (0.3%) GO:0002181 (0.3%)" "GO:0022625 (32.1%) GO:0005840 (2.3%) GO:0005737 (0.3%)" "GO:0003735 (32.3%) GO:0070180 (0.3%)" "translation (31.8%) ribosomal large subunit assembly (0.3%) cytoplasmic translation (0.3%)" "cytosolic large ribosomal subunit (32.1%) ribosome (2.3%) cytoplasm (0.3%)" "structural constituent of ribosome (32.3%) large ribosomal subunit rRNA binding (0.3%)" "IPR001857 (25.2%) IPR008991 (25.2%) IPR038657 (25.2%)" "Large ribosomal subunit protein bL19 (25.2%) Translation protein SH3-like domain superfamily (25.2%) Large ribosomal subunit protein bL19 superfamily (25.2%)" EQVEEEATAQGIVDKIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.16.3.2 (97.9%) 1.16.3.1 (2.1%)" "bacterial non-heme ferritin (97.9%) ferroxidase (2.1%)" "GO:0006826 (14.4%) GO:0006879 (14.4%)" "GO:0005829 (14.4%) GO:0005737 (0.3%)" "GO:0004322 (14.4%) GO:0008198 (14.4%) GO:0008199 (14.4%)" "iron ion transport (14.4%) intracellular iron ion homeostasis (14.4%)" "cytosol (14.4%) cytoplasm (0.3%)" "ferroxidase activity (14.4%) ferrous iron binding (14.4%) ferric iron binding (14.4%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" LSTLESILVPEDQPDLYTDYYHK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.5.1.4 (100%) inositol-3-phosphate synthase (100%) "GO:0006021 (33.3%) GO:0008654 (33.3%)" GO:0004512 (33.3%) "inositol biosynthetic process (33.3%) phospholipid biosynthetic process (33.3%)" inositol-3-phosphate synthase activity (33.3%) "IPR002587 (33.3%) IPR013021 (33.3%) IPR036291 (33.3%)" "Myo-inositol-1-phosphate synthase (33.3%) Myo-inositol-1-phosphate synthase, GAPDH-like (33.3%) NAD(P)-binding domain superfamily (33.3%)" RAGYTAVISHR root "4.2.1.11 (99.9%) 5.4.2.12 (0%) 6.3.4.2 (0%)" "phosphopyruvate hydratase (99.9%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (0%) CTP synthase (glutamine hydrolyzing) (0%)" "GO:0006096 (16.7%) GO:0006007 (0%) GO:0006508 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.6%) GO:0009986 (16.3%)" "GO:0004634 (16.7%) GO:0000287 (16.7%) GO:0016829 (0.1%)" "glycolytic process (16.7%) glucose catabolic process (0%) proteolysis (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.6%) cell surface (16.3%)" "phosphopyruvate hydratase activity (16.7%) magnesium ion binding (16.7%) lyase activity (0.1%)" "IPR020810 (16.7%) IPR000941 (16.7%) IPR020809 (16.6%)" "Enolase, C-terminal TIM barrel domain (16.7%) Enolase (16.7%) Enolase, conserved site (16.6%)" EYFRDKMIAAGFDIKPTQSAICAVMLYDAK Porphyromonas Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (14.3%) GO:0030148 (14.3%)" "GO:0005829 (14.3%) GO:0016020 (14.3%)" "GO:0004758 (14.3%) GO:0008890 (14.3%) GO:0030170 (14.3%)" "L-threonine catabolic process to glycine (14.3%) sphingolipid biosynthetic process (14.3%)" "cytosol (14.3%) membrane (14.3%)" "serine C-palmitoyltransferase activity (14.3%) glycine C-acetyltransferase activity (14.3%) pyridoxal phosphate binding (14.3%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" VLADLAVNHPEAFK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0006412 (17%) GO:0000027 (14.8%)" "GO:0005840 (17%) GO:1990904 (17%)" "GO:0003735 (17%) GO:0019843 (17%)" "translation (17%) ribosomal large subunit assembly (14.8%)" "ribosome (17%) ribonucleoprotein complex (17%)" "structural constituent of ribosome (17%) rRNA binding (17%)" "IPR005813 (33.3%) IPR035566 (33.3%) IPR049946 (33.3%)" "Large ribosomal subunit protein bL20 (33.3%) Ribosomal protein bL20, C-terminal (33.3%) Large ribosomal subunit protein bL20, conserved site (33.3%)" QADREGYPEVAEAFKR Bacteria Bacteria "1.11.1.1 (96.9%) 1.14.13.81 (3.1%)" "NADH peroxidase (96.9%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (3.1%)" "GO:0005506 (50%) GO:0016491 (21.7%) GO:0004601 (17.4%)" "iron ion binding (50%) oxidoreductase activity (21.7%) peroxidase activity (17.4%)" "IPR003251 (12.6%) IPR009040 (12.6%) IPR009078 (12.6%)" "Rubrerythrin, diiron-binding domain (12.6%) Ferritin-like diiron domain (12.6%) Ferritin-like superfamily (12.6%)" GSTEMGAGIVDFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR006311 (20%) IPR013022 (20%) IPR019546 (20%)" "Twin-arginine translocation pathway, signal sequence (20%) Xylose isomerase-like, TIM barrel domain (20%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (20%)" IYNTLMSQVVAGKK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0033103 (50%) GO:0033104 (50%) protein secretion by the type VI secretion system (50%) type VI protein secretion system complex (50%) IPR035576 (100%) Type VI secretion system TssC (100%) EGYTLLTCDSGTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.13.3 (100%) histidine kinase (100%) GO:0000155 (100%) phosphorelay sensor kinase activity (100%) "IPR001789 (14.3%) IPR003594 (14.3%) IPR003661 (14.3%)" "Signal transduction response regulator, receiver domain (14.3%) Histidine kinase/HSP90-like ATPase domain (14.3%) Signal transduction histidine kinase, dimerisation/phosphoacceptor domain (14.3%)" FKELSANDNAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" YLGVPLVLCNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" VAEVQYYLDEIEKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.7.1.- (40%) 2.7.1.162 (40%) 3.1.6.- (20%)" "Phosphotransferases with an alcohol group as acceptor (40%) N-acetylhexosamine 1-kinase (40%) Sulfuric ester hydrolases (20%)" "GO:0016740 (90.5%) GO:0016301 (9.5%)" "transferase activity (90.5%) kinase activity (9.5%)" "IPR002575 (33.3%) IPR011009 (33.3%) IPR050249 (33.3%)" "Aminoglycoside phosphotransferase (33.3%) Protein kinase-like domain superfamily (33.3%) Pseudomonas-type Homoserine Kinase (33.3%)" GYIGIENNKPDAIK Bacteria Bacteria 7.-.-.- (100%) Translocases (100%) GO:0022900 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0046872 (20%) GO:0051539 (20%)" electron transport chain (20%) plasma membrane (20%) "electron transfer activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR010208 (14.3%) IPR011538 (14.3%) IPR017896 (14.3%)" "Ion-translocating oxidoreductase complex, subunit RnfC/RsxC (14.3%) NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain (14.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14.3%)" YFDDPSTITEEEVLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (20.5%) GO:0005737 (18.3%) "GO:0003746 (20.7%) GO:0005525 (20.5%) GO:0003924 (20%)" ribosome disassembly (20.5%) cytoplasm (18.3%) "translation elongation factor activity (20.7%) GTP binding (20.5%) GTPase activity (20%)" "IPR027417 (6.5%) IPR004161 (6.4%) IPR009000 (6.4%)" "P-loop containing nucleoside triphosphate hydrolase (6.5%) Translation elongation factor EFTu-like, domain 2 (6.4%) Translation protein, beta-barrel domain superfamily (6.4%)" EVAAAEDPKACAAEKEAEYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.-.-.- (100%) Ligases (100%) GO:0015977 (23.3%) GO:0009317 (23.3%) "GO:0003989 (23.3%) GO:0004658 (23.3%) GO:0016740 (6.7%)" carbon fixation (23.3%) acetyl-CoA carboxylase complex (23.3%) "acetyl-CoA carboxylase activity (23.3%) propionyl-CoA carboxylase activity (23.3%) transferase activity (6.7%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" ENSEIYASLPEGVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" EYQNSIIPTGAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25.4%) GO:0005829 (25.4%) "GO:0004802 (25.4%) GO:0046872 (23.7%)" pentose-phosphate shunt (25.4%) cytosol (25.4%) "transketolase activity (25.4%) metal ion binding (23.7%)" "IPR009014 (13%) IPR033247 (13%) IPR055152 (13%)" "Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (13%) Transketolase family (13%) Transketolase-like, C-terminal domain (13%)" LAQKEEESKELCAQVEALEIIVTAMLR Pseudomonadati Bacteria Pseudomonadati "GO:0009267 (46.4%) GO:0016036 (0.6%) GO:0042177 (0.6%)" GO:0005737 (52%) GO:0043856 (0.6%) "cellular response to starvation (46.4%) cellular response to phosphate starvation (0.6%) negative regulation of protein catabolic process (0.6%)" cytoplasm (52%) anti-sigma factor antagonist activity (0.6%) IPR019732 (100%) Sigma-S stabilisation anti-adaptor protein (100%) KLTDSEVFGFSQVNSEHCR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.1%) GO:0006164 (0.9%)" GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (19.9%)" "'de novo' IMP biosynthetic process (19.1%) purine nucleotide biosynthetic process (0.9%)" cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (19.9%)" "IPR041609 (11.2%) IPR036604 (11.2%) IPR040707 (11.2%)" "Phosphoribosylformylglycinamidine synthase, linker domain (11.2%) Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily (11.2%) Phosphoribosylformylglycinamidine synthase, N-terminal (11.2%)" QWGSPTPGHPEVNVDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.2.1.1 (95.5%) 2.2.1.- (4.5%)" "transketolase (95.5%) Transketolases and transaldolases (4.5%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" GGYVGKDGVPR root 4.1.3.36 (100%) 1,4-dihydroxy-2-naphthoyl-CoA synthase (100%) GO:0009234 (33.3%) GO:0005829 (33.3%) GO:0008935 (33.3%) menaquinone biosynthetic process (33.3%) cytosol (33.3%) 1,4-dihydroxy-2-naphthoyl-CoA synthase activity (33.3%) "IPR001753 (20.5%) IPR018376 (20.5%) IPR029045 (20.5%)" "Enoyl-CoA hydratase/isomerase (20.5%) Enoyl-CoA hydratase/isomerase, conserved site (20.5%) ClpP/crotonase-like domain superfamily (20.5%)" GQIPVQEPEQVREAAPEPQAPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (11.1%) GO:0008564 (0.5%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (11.1%) protein-exporting ATPase activity (0.5%)" "IPR000185 (8.1%) IPR004027 (8.1%) IPR011116 (8.1%)" "Protein translocase subunit SecA (8.1%) SEC-C motif (8.1%) SecA Wing/Scaffold (8.1%)" THNISNVESIANIVFLAGSER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.4.21.92 (100%) endopeptidase Clp (100%) GO:0006508 (37.5%) "GO:0004252 (29.2%) GO:0004176 (25%) GO:0008233 (8.3%)" proteolysis (37.5%) "serine-type endopeptidase activity (29.2%) ATP-dependent peptidase activity (25%) peptidase activity (8.3%)" "IPR023562 (38.5%) IPR029045 (38.5%) IPR001907 (23.1%)" "Clp protease proteolytic subunit /Translocation-enhancing protein TepA (38.5%) ClpP/crotonase-like domain superfamily (38.5%) ATP-dependent Clp protease proteolytic subunit (23.1%)" VVVTGLGALTPVGNNVAETWENLVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" KHFESTPDTPEIIATIHGEGYR root "GO:0006355 (20.1%) GO:0000160 (0.6%) GO:0045892 (0%)" "GO:0005829 (19.5%) GO:0032993 (19.5%) GO:0005737 (0%)" "GO:0000156 (19.5%) GO:0000976 (19.5%) GO:0003677 (0.6%)" "regulation of DNA-templated transcription (20.1%) phosphorelay signal transduction system (0.6%) negative regulation of DNA-templated transcription (0%)" "cytosol (19.5%) protein-DNA complex (19.5%) cytoplasm (0%)" "phosphorelay response regulator activity (19.5%) transcription cis-regulatory region binding (19.5%) DNA binding (0.6%)" "IPR001867 (16.8%) IPR016032 (16.8%) IPR036388 (16.8%)" "OmpR/PhoB-type DNA-binding domain (16.8%) Signal transduction response regulator, C-terminal effector (16.8%) Winged helix-like DNA-binding domain superfamily (16.8%)" GLLTAELKDEVTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis VQNFADLQEAIAQHRPGDKVTVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.21.- (50%) 3.4.21.107 (50%)" "Serine endopeptidases (50%) peptidase Do (50%)" GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001478 (23.7%) IPR001940 (23.7%) IPR009003 (23.7%)" "PDZ domain (23.7%) Peptidase S1C (23.7%) Peptidase S1, PA clan (23.7%)" ESDPVDTNAESR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 3.2.1.21 (100%) beta-glucosidase (100%) "GO:0009251 (33.5%) GO:0005975 (0.2%) GO:0031222 (0.1%)" "GO:0042597 (31.9%) GO:0030288 (0.1%)" "GO:0008422 (33.8%) GO:0016798 (0.3%) GO:0009044 (0.1%)" "glucan catabolic process (33.5%) carbohydrate metabolic process (0.2%) arabinan catabolic process (0.1%)" "periplasmic space (31.9%) outer membrane-bounded periplasmic space (0.1%)" "beta-glucosidase activity (33.8%) hydrolase activity, acting on glycosyl bonds (0.3%) xylan 1,4-beta-xylosidase activity (0.1%)" "IPR017853 (11.2%) IPR036881 (11.2%) IPR036962 (11.2%)" "Glycoside hydrolase superfamily (11.2%) Glycoside hydrolase family 3 C-terminal domain superfamily (11.2%) Glycoside hydrolase, family 3, N-terminal domain superfamily (11.2%)" MLDDYEDRFYHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" EKATLVNPQGLHMRPAGLFASTMGK Collinsella Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella 2.7.11.- (100%) Protein-serine/threonine kinases (100%) GO:0009401 (46.2%) GO:0005737 (46.2%) GO:0016740 (7.7%) phosphoenolpyruvate-dependent sugar phosphotransferase system (46.2%) cytoplasm (46.2%) transferase activity (7.7%) "IPR000032 (33.3%) IPR035895 (33.3%) IPR050399 (33.3%)" "Phosphocarrier protein HPr-like (33.3%) HPr-like superfamily (33.3%) Phosphocarrier protein HPr (33.3%)" IMHNPDFVKGEYNTLFIAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.14 (100%) biotin carboxylase (100%) GO:2001295 (12.5%) "GO:0005524 (25%) GO:0046872 (25%) GO:0003989 (12.5%)" malonyl-CoA biosynthetic process (12.5%) "ATP binding (25%) metal ion binding (25%) acetyl-CoA carboxylase activity (12.5%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" GEGIHHIAFAVPDVQAALNEAEEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (43.8%) "GO:0004493 (43.8%) GO:0016829 (6.3%) GO:0051213 (6.3%)" L-methylmalonyl-CoA metabolic process (43.8%) "methylmalonyl-CoA epimerase activity (43.8%) lyase activity (6.3%) dioxygenase activity (6.3%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" KANINPAHVDSEDHMESNMAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005737 (48.9%) GO:0003746 (51.1%) cytoplasm (48.9%) translation elongation factor activity (51.1%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" QMSAEELEAALKEIIAEVGATSGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0016884 (92.3%) GO:0016740 (7.7%)" "carbon-nitrogen ligase activity, with glutamine as amido-N-donor (92.3%) transferase activity (7.7%)" "IPR003789 (25%) IPR019004 (25%) IPR023168 (25%)" "Aspartyl/glutamyl-tRNA amidotransferase subunit B-like (25%) Uncharacterised protein YqeY/Aim41 (25%) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 (25%)" ELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIK root "GO:0006412 (32.9%) GO:0000028 (0.2%) GO:0002181 (0.1%)" "GO:0022627 (33%) GO:0005840 (0.7%) GO:0005737 (0.1%)" "GO:0003735 (33%) GO:0008270 (0.1%)" "translation (32.9%) ribosomal small subunit assembly (0.2%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (33%) ribosome (0.7%) cytoplasm (0.1%)" "structural constituent of ribosome (33%) zinc ion binding (0.1%)" "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" GLGAGADPEKGAK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae "GO:0000917 (14.4%) GO:0043093 (14.1%) GO:0051258 (14.1%)" "GO:0005737 (14.4%) GO:0032153 (14.4%)" "GO:0003924 (14.4%) GO:0005525 (14.4%)" "division septum assembly (14.4%) FtsZ-dependent cytokinesis (14.1%) protein polymerization (14.1%)" "cytoplasm (14.4%) cell division site (14.4%)" "GTPase activity (14.4%) GTP binding (14.4%)" "IPR000158 (11.2%) IPR003008 (11.2%) IPR008280 (11.2%)" "Cell division protein FtsZ (11.2%) Tubulin/FtsZ, GTPase domain (11.2%) Tubulin/FtsZ, C-terminal (11.2%)" ELGWKPQETFESGIRK root 4.2.1.46 (100%) dTDP-glucose 4,6-dehydratase (100%) "GO:0009225 (40.2%) GO:1901137 (15.2%) GO:0009103 (3%)" "GO:0008460 (40.7%) GO:0016829 (0.4%)" "nucleotide-sugar metabolic process (40.2%) carbohydrate derivative biosynthetic process (15.2%) lipopolysaccharide biosynthetic process (3%)" "dTDP-glucose 4,6-dehydratase activity (40.7%) lyase activity (0.4%)" "IPR016040 (33.5%) IPR036291 (33.2%) IPR005888 (32.8%)" "NAD(P)-binding domain (33.5%) NAD(P)-binding domain superfamily (33.2%) dTDP-glucose 4,6-dehydratase (32.8%)" GLPALTASEFLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0016226 (0.6%) GO:1990229 (0.6%) "GO:0005524 (49.4%) GO:0016887 (49.4%)" iron-sulfur cluster assembly (0.6%) iron-sulfur cluster assembly complex (0.6%) "ATP binding (49.4%) ATP hydrolysis activity (49.4%)" "IPR003439 (25.2%) IPR010230 (25.2%) IPR027417 (25.2%)" "ABC transporter-like, ATP-binding domain (25.2%) FeS cluster assembly SUF system, ATPase SufC (25.2%) P-loop containing nucleoside triphosphate hydrolase (25.2%)" YYEEGKWVTTKPLEYHK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.5.1.43 (50%) 1.5.1.7 (50%)" "carboxynorspermidine synthase (50%) saccharopine dehydrogenase (NAD(+), L-lysine-forming) (50%)" "GO:0004754 (50%) GO:0102143 (50%)" "saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (50%) carboxynorspermidine dehydrogenase activity (50%)" "IPR005097 (33.3%) IPR032095 (33.3%) IPR036291 (33.3%)" "Saccharopine dehydrogenase, NADP binding domain (33.3%) Saccharopine dehydrogenase-like, C-terminal (33.3%) NAD(P)-binding domain superfamily (33.3%)" NLGPDRDVPAGDIGVGGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (25.5%) GO:0005829 (24.8%) "GO:0004354 (25.5%) GO:0000166 (24.1%)" glutamate biosynthetic process (25.5%) cytosol (24.8%) "glutamate dehydrogenase (NADP+) activity (25.5%) nucleotide binding (24.1%)" "IPR006095 (12.2%) IPR006096 (12.2%) IPR006097 (12.2%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (12.2%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (12.2%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.2%)" LLVQQEPDASSFPNGGIR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (49.8%) "GO:0004356 (50%) GO:0016874 (0.2%)" glutamine biosynthetic process (49.8%) "glutamine synthetase activity (50%) ligase activity (0.2%)" "IPR022147 (14.4%) IPR052725 (14.4%) IPR008146 (14.3%)" "Glutamine synthetase type III N-terminal (14.4%) Glutamine Synthetase Type-3 (14.4%) Glutamine synthetase, catalytic domain (14.3%)" WWKPFDVSYEFK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria GO:0046872 (100%) metal ion binding (100%) "IPR018470 (50%) IPR038482 (50%)" "Periplasmic metal-binding protein Tp34-type (50%) Periplasmic metal-binding protein Tp34-type superfamily (50%)" DQAGIDKIMIDLDGTENKSK root "4.2.1.11 (99.1%) 6.3.4.2 (0.9%)" "phosphopyruvate hydratase (99.1%) CTP synthase (glutamine hydrolyzing) (0.9%)" "GO:0006096 (16.7%) GO:0006396 (0.2%) GO:0006401 (0.2%)" "GO:0000015 (16.7%) GO:0005576 (16.3%) GO:0009986 (14.2%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.5%)" "glycolytic process (16.7%) RNA processing (0.2%) RNA catabolic process (0.2%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.3%) cell surface (14.2%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.5%)" "IPR000941 (17%) IPR020811 (17%) IPR029017 (17%)" "Enolase (17%) Enolase, N-terminal (17%) Enolase-like, N-terminal (17%)" QSLKDAGLSTSDIDEVILVGGSTRIPAVQAIVEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005737 (23.5%) GO:0070013 (3.1%)" "GO:0005524 (24.5%) GO:0051082 (24.5%) GO:0140662 (24.5%)" "cytoplasm (23.5%) intracellular organelle lumen (3.1%)" "ATP binding (24.5%) unfolded protein binding (24.5%) ATP-dependent protein folding chaperone (24.5%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" MIMLFTNSHTIR root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.7%) GO:0006418 (0.1%) GO:0034605 (0.1%)" "GO:0005829 (14.7%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0000049 (14.7%) GO:0004824 (14.7%) GO:0005524 (14.7%)" "lysyl-tRNA aminoacylation (14.7%) tRNA aminoacylation for protein translation (0.1%) cellular response to heat (0.1%)" "cytosol (14.7%) cytoplasm (0.1%) membrane (0.1%)" "tRNA binding (14.7%) lysine-tRNA ligase activity (14.7%) ATP binding (14.7%)" "IPR004364 (12.1%) IPR006195 (12.1%) IPR045864 (12.1%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (12.1%) Aminoacyl-tRNA synthetase, class II (12.1%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (12.1%)" NLTSQMVEYGQVK Bacteria Bacteria "3.4.21.107 (99.6%) 3.4.21.- (0.4%)" "peptidase Do (99.6%) Serine endopeptidases (0.4%)" "GO:0051603 (28.6%) GO:0006515 (1%) GO:0006508 (1%)" "GO:0030313 (28%) GO:0042597 (5.1%) GO:0005886 (0.2%)" "GO:0004252 (30%) GO:0042802 (4.6%) GO:0008233 (0.4%)" "proteolysis involved in protein catabolic process (28.6%) protein quality control for misfolded or incompletely synthesized proteins (1%) proteolysis (1%)" "cell envelope (28%) periplasmic space (5.1%) plasma membrane (0.2%)" "serine-type endopeptidase activity (30%) identical protein binding (4.6%) peptidase activity (0.4%)" "IPR001940 (20.1%) IPR009003 (20.1%) IPR036034 (20%)" "Peptidase S1C (20.1%) Peptidase S1, PA clan (20.1%) PDZ superfamily (20%)" AAKEAMDTHGYGMSSVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (14.7%) GO:0030148 (14.7%)" "GO:0005829 (14.7%) GO:0016020 (14.7%)" "GO:0008890 (14.7%) GO:0030170 (14.7%) GO:0016874 (6.9%)" "L-threonine catabolic process to glycine (14.7%) sphingolipid biosynthetic process (14.7%)" "cytosol (14.7%) membrane (14.7%)" "glycine C-acetyltransferase activity (14.7%) pyridoxal phosphate binding (14.7%) ligase activity (6.9%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" AVQELVEKFFGKTPSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0005524 (33.3%) GO:0051082 (33.3%) GO:0140662 (33.3%)" "ATP binding (33.3%) unfolded protein binding (33.3%) ATP-dependent protein folding chaperone (33.3%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" TVAVVGGGDTACEEAIYLAGLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.8.1.9 (100%) thioredoxin-disulfide reductase (NADPH) (100%) GO:0019430 (33.3%) GO:0005737 (33.3%) GO:0004791 (33.3%) removal of superoxide radicals (33.3%) cytoplasm (33.3%) thioredoxin-disulfide reductase (NADPH) activity (33.3%) "IPR005982 (20%) IPR008255 (20%) IPR023753 (20%)" "Thioredoxin reductase (20%) Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (20%) FAD/NAD(P)-binding domain (20%)" DGSQTSVAVPMTSVLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR027824 (50%) IPR049893 (50%)" "Domain of unknown function DUF4469 with IG-like fold (50%) Bvu_2165-like, IHF-HU-like DNA-binding domain (50%)" SASLAYQNAVTAVSEGKPDSIPAAEK root 6.1.1.21 (100%) histidine--tRNA ligase (100%) GO:0006427 (0.5%) "GO:0005886 (48.9%) GO:0005737 (0.5%)" "GO:0044877 (48.9%) GO:0004821 (0.5%) GO:0005524 (0.5%)" histidyl-tRNA aminoacylation (0.5%) "plasma membrane (48.9%) cytoplasm (0.5%)" "protein-containing complex binding (48.9%) histidine-tRNA ligase activity (0.5%) ATP binding (0.5%)" "IPR018704 (32.9%) IPR026039 (32.5%) IPR011990 (31.8%)" "Ancillary SecYEG translocon subunit/Cell division coordinator CpoB, TPR domain (32.9%) Ancillary SecYEG translocon subunit YfgM (32.5%) Tetratricopeptide-like helical domain superfamily (31.8%)" GLHPENYRPVVFKDMSNGDVFLSR Bacteria Bacteria GO:0006412 (24.4%) "GO:0005840 (25.2%) GO:1990904 (25.2%)" GO:0003735 (25.2%) translation (24.4%) "ribosome (25.2%) ribonucleoprotein complex (25.2%)" structural constituent of ribosome (25.2%) "IPR002150 (25%) IPR027493 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL31 type A/B (25%) Large ribosomal subunit protein bL31 type B (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" IRFPETSSFGIKPVSVEGTER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.42 (100%) isocitrate dehydrogenase (NADP(+)) (100%) "GO:0006097 (20%) GO:0006099 (20%)" "GO:0000287 (20%) GO:0004450 (20%) GO:0051287 (20%)" "glyoxylate cycle (20%) tricarboxylic acid cycle (20%)" "magnesium ion binding (20%) isocitrate dehydrogenase (NADP+) activity (20%) NAD binding (20%)" "IPR004439 (33.3%) IPR019818 (33.3%) IPR024084 (33.3%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (33.3%) Isocitrate/isopropylmalate dehydrogenase, conserved site (33.3%) Isopropylmalate dehydrogenase-like domain (33.3%)" LNKELLWDGPNMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (81.8%) GO:0050112 (18.2%)" "nucleotide binding (81.8%) inositol 2-dehydrogenase (NAD+) activity (18.2%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" FGMADQVSYISTGGGALLEAIEGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" YHGAGVIVSQLIK Bacteria Bacteria 4.2.1.20 (100%) tryptophan synthase (100%) GO:0000162 (0.1%) "GO:0005737 (25%) GO:0016020 (0.6%)" "GO:0004834 (25.1%) GO:0052684 (25.1%) GO:0030170 (24.1%)" L-tryptophan biosynthetic process (0.1%) "cytoplasm (25%) membrane (0.6%)" "tryptophan synthase activity (25.1%) L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity (25.1%) pyridoxal phosphate binding (24.1%)" "IPR023026 (20.4%) IPR036052 (20.3%) IPR001926 (20.1%)" "Tryptophan synthase beta chain/beta chain-like (20.4%) Tryptophan synthase beta chain-like, PALP domain superfamily (20.3%) Tryptophan synthase beta chain-like, PALP domain (20.1%)" GEVVASTFDEPASR root 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.4%) "GO:0005829 (13.9%) GO:0016020 (0%)" "GO:0003723 (14.4%) GO:0005524 (14.4%) GO:0008186 (14.4%)" DNA-templated transcription termination (14.4%) "cytosol (13.9%) membrane (0%)" "RNA binding (14.4%) ATP binding (14.4%) ATP-dependent activity, acting on RNA (14.4%)" "IPR004665 (10.2%) IPR000194 (10.2%) IPR027417 (10.2%)" "Transcription termination factor Rho (10.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.2%) P-loop containing nucleoside triphosphate hydrolase (10.2%)" ILADGGSVIIGSHLGRPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" LTTKESELLGLLCAHANEILQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006355 (20%) GO:0000160 (0.4%)" "GO:0005829 (19.9%) GO:0032993 (19.9%)" "GO:0000156 (19.9%) GO:0000976 (19.9%) GO:0003677 (0.2%)" "regulation of DNA-templated transcription (20%) phosphorelay signal transduction system (0.4%)" "cytosol (19.9%) protein-DNA complex (19.9%)" "phosphorelay response regulator activity (19.9%) transcription cis-regulatory region binding (19.9%) DNA binding (0.2%)" "IPR001867 (17.3%) IPR036388 (17.3%) IPR001789 (17.2%)" "OmpR/PhoB-type DNA-binding domain (17.3%) Winged helix-like DNA-binding domain superfamily (17.3%) Signal transduction response regulator, receiver domain (17.2%)" AADMTGADIEAMTR root "GO:0006412 (24.7%) GO:0000027 (0.1%) GO:0002181 (0.1%)" "GO:0022625 (24.5%) GO:0005840 (0.6%) GO:0005829 (0.1%)" "GO:0003735 (24.7%) GO:0070180 (24.5%) GO:0019843 (0.1%)" "translation (24.7%) ribosomal large subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic large ribosomal subunit (24.5%) ribosome (0.6%) cytosol (0.1%)" "structural constituent of ribosome (24.7%) large ribosomal subunit rRNA binding (24.5%) rRNA binding (0.1%)" "IPR020783 (14.3%) IPR036769 (14.3%) IPR000911 (14.3%)" "Large ribosomal subunit protein uL11, C-terminal (14.3%) Large ribosomal subunit protein uL11, C-terminal domain superfamily (14.3%) Ribosomal protein uL11 (14.3%)" DRVDDALR root "5.6.1.7 (82.3%) 4.2.1.- (6.2%) 2.7.13.3 (1.8%)" "chaperonin ATPase (82.3%) Hydro-lyases (6.2%) histidine kinase (1.8%)" "GO:0042026 (13.4%) GO:0006635 (1.9%) GO:0006882 (0.5%)" "GO:0005737 (12.6%) GO:0005739 (2%) GO:0005886 (1.1%)" "GO:0005524 (14%) GO:0016853 (13.4%) GO:0140662 (13.4%)" "protein refolding (13.4%) fatty acid beta-oxidation (1.9%) intracellular zinc ion homeostasis (0.5%)" "cytoplasm (12.6%) mitochondrion (2%) plasma membrane (1.1%)" "ATP binding (14%) isomerase activity (13.4%) ATP-dependent protein folding chaperone (13.4%)" "IPR001844 (11.4%) IPR002423 (11.4%) IPR027410 (11.4%)" "Chaperonin Cpn60/GroEL (11.4%) Chaperonin Cpn60/GroEL/TCP-1 family (11.4%) TCP-1-like chaperonin intermediate domain superfamily (11.4%)" TNLSFLTELMDTFGQAGIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.6.99.2 (100%) pyridoxine 5'-phosphate synthase (100%) GO:0008615 (33.3%) GO:0005829 (33.3%) GO:0033856 (33.3%) pyridoxine biosynthetic process (33.3%) cytosol (33.3%) pyridoxine 5'-phosphate synthase activity (33.3%) "IPR004569 (35.5%) IPR013785 (32.3%) IPR036130 (32.3%)" "Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ (35.5%) Aldolase-type TIM barrel (32.3%) Pyridoxine 5'-phosphate synthase (32.3%)" VHNTRGEVVEPDPDGPTSLYFFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.1%) IPR000795 (7.1%) IPR005225 (7.1%)" "Elongation factor EFG, domain V-like (7.1%) Translational (tr)-type GTP-binding domain (7.1%) Small GTP-binding domain (7.1%)" IGSAGLDVYEEESEYFYEDKSDR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.28 (100%) D-lactate dehydrogenase (100%) "GO:0008720 (50%) GO:0051287 (50%)" "D-lactate dehydrogenase (NAD+) activity (50%) NAD binding (50%)" "IPR006139 (25%) IPR006140 (25%) IPR029753 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (25%)" IGTHYNNPSFGYGGYCLPK root 1.1.1.22 (100%) UDP-glucose 6-dehydrogenase (100%) "GO:0000271 (25.5%) GO:0006065 (19.6%) GO:0006072 (1.1%)" GO:0016020 (0.1%) "GO:0051287 (25.8%) GO:0003979 (25.4%) GO:0003677 (2.3%)" "polysaccharide biosynthetic process (25.5%) UDP-glucuronate biosynthetic process (19.6%) glycerol-3-phosphate metabolic process (1.1%)" membrane (0.1%) "NAD binding (25.8%) UDP-glucose 6-dehydrogenase activity (25.4%) DNA binding (2.3%)" "IPR014026 (11%) IPR008927 (10.9%) IPR036220 (10.9%)" "UDP-glucose/GDP-mannose dehydrogenase, dimerisation (11%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (10.9%) UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily (10.9%)" GIREVVEGAGMELALLEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (47.1%) GO:0016616 (35.3%) GO:0004617 (11.8%)" "NAD binding (47.1%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (35.3%) phosphoglycerate dehydrogenase activity (11.8%)" "IPR006139 (25%) IPR006140 (25%) IPR029752 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 (25%)" TGVVPPADIDVIMVAPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.86 (96.2%) 1.1.1.- (3.8%)" "ketol-acid reductoisomerase (NADP(+)) (96.2%) With NAD(+) or NADP(+) as acceptor (3.8%)" "GO:0009097 (20.8%) GO:0009099 (20.8%)" "GO:0004455 (20.8%) GO:0046872 (20.4%) GO:0016853 (17.1%)" "isoleucine biosynthetic process (20.8%) L-valine biosynthetic process (20.8%)" "ketol-acid reductoisomerase activity (20.8%) metal ion binding (20.4%) isomerase activity (17.1%)" "IPR013023 (16.8%) IPR013116 (16.8%) IPR036291 (16.8%)" "Ketol-acid reductoisomerase (16.8%) Ketol-acid reductoisomerase, N-terminal (16.8%) NAD(P)-binding domain superfamily (16.8%)" HGDGYPGWAPNPDSK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae "3.4.13.18 (93.8%) 3.4.13.- (3.1%) 3.4.13.20 (3.1%)" "cytosol non-specific dipeptidase (93.8%) Dipeptidases (3.1%) beta-Ala-His dipeptidase (3.1%)" GO:0006508 (25.4%) GO:0005829 (25.4%) "GO:0070573 (25.4%) GO:0046872 (23.8%)" proteolysis (25.4%) cytosol (25.4%) "metallodipeptidase activity (25.4%) metal ion binding (23.8%)" "IPR001160 (32%) IPR002933 (32%) IPR011650 (32%)" "Peptidase M20C, Xaa-His dipeptidase (32%) Peptidase M20 (32%) Peptidase M20, dimerisation domain (32%)" SREQFELSSFKR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0000049 (16.7%) GO:0003723 (3.3%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) tRNA binding (16.7%) RNA binding (3.3%)" "IPR001848 (25.3%) IPR027486 (25.3%) IPR036838 (25.3%)" "Small ribosomal subunit protein uS10 (25.3%) Small ribosomal subunit protein uS10 domain (25.3%) Small ribosomal subunit protein uS10 domain superfamily (25.3%)" ISLIQLADYIMTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0008299 (50%) GO:0004659 (50%) isoprenoid biosynthetic process (50%) prenyltransferase activity (50%) "IPR000092 (33.3%) IPR008949 (33.3%) IPR033749 (33.3%)" "Polyprenyl synthetase-like (33.3%) Isoprenoid synthase domain superfamily (33.3%) Polyprenyl synthetase, conserved site (33.3%)" FLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLK root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0042026 (24%) GO:0006457 (0.3%) GO:0009408 (0.3%)" "GO:0005737 (24%) GO:0005829 (0.3%)" "GO:0003755 (24.3%) GO:0046872 (23.8%) GO:0016853 (1.1%)" "protein refolding (24%) protein folding (0.3%) response to heat (0.3%)" "cytoplasm (24%) cytosol (0.3%)" "peptidyl-prolyl cis-trans isomerase activity (24.3%) metal ion binding (23.8%) isomerase activity (1.1%)" "IPR046357 (33.7%) IPR048261 (33.3%) IPR001179 (33%)" "Peptidyl-prolyl cis-trans isomerase domain superfamily (33.7%) PPIase chaperone SlpA/SlyD-like, insertion domain superfamily (33.3%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (33%)" GGGFSSNFLSK Bacteroidota Bacteria Pseudomonadati Bacteroidota 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR005763 (11.3%) IPR015888 (11.3%) IPR004216 (11.2%)" "L-fucose isomerase (11.3%) L-fucose isomerase, C-terminal (11.3%) L-fucose/L-arabinose isomerase, C-terminal (11.2%)" ELGLNSETATVFNLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.5%) GO:0005829 (17.5%) "GO:0004612 (17.5%) GO:0005524 (17.5%) GO:0046872 (17.1%)" gluconeogenesis (17.5%) cytosol (17.5%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.5%) ATP binding (17.5%) metal ion binding (17.1%)" "IPR001272 (25.3%) IPR008210 (25.3%) IPR013035 (24.8%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.3%) Phosphoenolpyruvate carboxykinase, N-terminal (25.3%) Phosphoenolpyruvate carboxykinase, C-terminal (24.8%)" NMITGAAQMDGAILVVAATDGPMAQTR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0032790 (0%) GO:0070125 (0%)" "GO:0005829 (19.9%) GO:0005739 (0%) GO:0032045 (0%)" "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" "ribosome disassembly (0%) mitochondrial translational elongation (0%)" "cytosol (19.9%) mitochondrion (0%) guanyl-nucleotide exchange factor complex (0%)" "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000795 (8.5%) IPR027417 (8.5%) IPR050055 (8.5%)" "Translational (tr)-type GTP-binding domain (8.5%) P-loop containing nucleoside triphosphate hydrolase (8.5%) Elongation factor Tu GTPase (8.5%)" DSDVGKVIVDPFR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (30.6%) GO:1902600 (30.6%) GO:0006811 (0.7%)" "GO:0005524 (31.3%) GO:0016787 (6.7%)" "ATP metabolic process (30.6%) proton transmembrane transport (30.6%) monoatomic ion transport (0.7%)" "ATP binding (31.3%) hydrolase activity (6.7%)" "IPR000194 (20.1%) IPR022879 (20.1%) IPR027417 (20.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.1%) V-type ATP synthase regulatory subunit B/beta (20.1%) P-loop containing nucleoside triphosphate hydrolase (20.1%)" LQEAQDQVAQAQQLTQEHAAQSQQQDAQVK Bifidobacterium adolescentis Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium adolescentis GO:0051301 (50%) GO:0005737 (50%) cell division (50%) cytoplasm (50%) "IPR007793 (50%) IPR019933 (50%)" "DivIVA family (50%) DivIVA domain (50%)" ILTSGQQSDAVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005737 (50%) GO:0005507 (50%) cytoplasm (50%) copper ion binding (50%) "IPR005627 (50%) IPR036822 (50%)" "CutC-like (50%) CutC-like domain superfamily (50%)" VIGQDEAIAAVSDAVR Pseudomonadati Bacteria Pseudomonadati "GO:0034605 (19.6%) GO:0042026 (19.6%) GO:0006508 (0.9%)" GO:0005737 (19.6%) "GO:0005524 (19.6%) GO:0016887 (19.6%) GO:0008233 (0.9%)" "cellular response to heat (19.6%) protein refolding (19.6%) proteolysis (0.9%)" cytoplasm (19.6%) "ATP binding (19.6%) ATP hydrolysis activity (19.6%) peptidase activity (0.9%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" KHQKPVPALNQPGGIVEK root "GO:0006412 (16.7%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (17%) GO:1990904 (16.6%) GO:0005829 (16%)" "GO:0003735 (16.7%) GO:0019843 (16.6%) GO:0000049 (0%)" "translation (16.7%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (17%) ribonucleoprotein complex (16.6%) cytosol (16%)" "structural constituent of ribosome (16.7%) rRNA binding (16.6%) tRNA binding (0%)" "IPR003256 (14.5%) IPR008991 (14.5%) IPR014722 (14.5%)" "Large ribosomal subunit protein uL24 (14.5%) Translation protein SH3-like domain superfamily (14.5%) Large ribosomal subunit protein uL2, domain 2 (14.5%)" DVHYTHYGR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (20.1%) GO:0006508 (0.1%) GO:0006412 (0%)" "GO:0000428 (20.2%) GO:0016020 (0%) GO:0005840 (0%)" "GO:0003677 (20.1%) GO:0003899 (20.1%) GO:0032549 (19.3%)" "DNA-templated transcription (20.1%) proteolysis (0.1%) translation (0%)" "DNA-directed RNA polymerase complex (20.2%) membrane (0%) ribosome (0%)" "DNA binding (20.1%) DNA-directed RNA polymerase activity (20.1%) ribonucleoside binding (19.3%)" "IPR007645 (8.4%) IPR015712 (8.1%) IPR019462 (8%)" "RNA polymerase Rpb2, domain 3 (8.4%) DNA-directed RNA polymerase, subunit 2 (8.1%) DNA-directed RNA polymerase, beta subunit, external 1 domain (8%)" YACDVTVVTPEK Collinsella aerofaciens Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella aerofaciens 2.7.11.- (100%) Protein-serine/threonine kinases (100%) GO:0009401 (42.9%) GO:0005737 (42.9%) GO:0016740 (14.3%) phosphoenolpyruvate-dependent sugar phosphotransferase system (42.9%) cytoplasm (42.9%) transferase activity (14.3%) "IPR000032 (33.3%) IPR035895 (33.3%) IPR050399 (33.3%)" "Phosphocarrier protein HPr-like (33.3%) HPr-like superfamily (33.3%) Phosphocarrier protein HPr (33.3%)" QLTPHPWDALDTNLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" VVVDAGDSENLK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" EFDKLIVGAKDEFDR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" MNPTNNSQVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.2.1.22 (50%) 3.2.1.20 (25%) 3.2.1.3 (25%)" "alpha-galactosidase (50%) alpha-glucosidase (25%) glucan 1,4-alpha-glucosidase (25%)" "GO:0030246 (58.1%) GO:0016787 (32.6%) GO:0004557 (4.7%)" "carbohydrate binding (58.1%) hydrolase activity (32.6%) alpha-galactosidase activity (4.7%)" "IPR019563 (14.5%) IPR029483 (14.5%) IPR029486 (14.5%)" "Glycosyl-hydrolase 97, catalytic domain (14.5%) Glycosyl-hydrolase 97, C-terminal oligomerisation domain (14.5%) Glycosyl-hydrolase 97, N-terminal domain (14.5%)" FEADKAEREGDYGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0034605 (19.7%) GO:0042026 (19%) GO:0006508 (1.1%)" GO:0005737 (19.7%) "GO:0005524 (19.7%) GO:0016887 (19.7%) GO:0008233 (1.1%)" "cellular response to heat (19.7%) protein refolding (19%) proteolysis (1.1%)" cytoplasm (19.7%) "ATP binding (19.7%) ATP hydrolysis activity (19.7%) peptidase activity (1.1%)" "IPR027417 (8.4%) IPR001270 (8.3%) IPR003593 (8.3%)" "P-loop containing nucleoside triphosphate hydrolase (8.4%) ClpA/B family (8.3%) AAA+ ATPase domain (8.3%)" FGGFGLADDTIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) GO:0005737 (20%) "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (20%)" glycogen biosynthetic process (20%) cytoplasm (20%) "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (20%)" "IPR004193 (12.5%) IPR006047 (12.5%) IPR006048 (12.5%)" "Glycoside hydrolase, family 13, N-terminal (12.5%) Glycosyl hydrolase family 13, catalytic domain (12.5%) Alpha-amylase/branching enzyme, C-terminal all beta (12.5%)" LHVESTDDTSILENMTNQFKPHSGSIVFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0033104 (100%) type VI protein secretion system complex (100%) IPR041408 (100%) Hemolysin coregulated protein (Hcp) TssD (100%) TQLINLFEVADGKR root "GO:0000917 (24.8%) GO:0051301 (0.2%)" GO:0005829 (25%) "GO:0005525 (25%) GO:0046872 (25%)" "division septum assembly (24.8%) cell division (0.2%)" cytosol (25%) "GTP binding (25%) metal ion binding (25%)" "IPR006073 (25%) IPR019987 (25%) IPR027417 (25%)" "GTP binding domain (25%) GTP-binding protein, ribosome biogenesis, YsxC (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" MNNYETVFILTPVLSDAQMKEAVEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.8%) "GO:0005737 (16.8%) GO:0005840 (16.8%) GO:1990904 (16.1%)" "GO:0003735 (16.8%) GO:0070181 (16.8%)" translation (16.8%) "cytoplasm (16.8%) ribosome (16.8%) ribonucleoprotein complex (16.1%)" "structural constituent of ribosome (16.8%) small ribosomal subunit rRNA binding (16.8%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" REETPAIQNQAASTTLGDIDALAALKEQLEGKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" MERYESLFAQLK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.2.1.20 (100%) tryptophan synthase (100%) "GO:0000162 (0.4%) GO:0009073 (0.4%)" "GO:0005829 (48.8%) GO:0005737 (0.4%)" "GO:0004834 (48.8%) GO:0016829 (1.1%) GO:0060090 (0.4%)" "L-tryptophan biosynthetic process (0.4%) aromatic amino acid family biosynthetic process (0.4%)" "cytosol (48.8%) cytoplasm (0.4%)" "tryptophan synthase activity (48.8%) lyase activity (1.1%) molecular adaptor activity (0.4%)" "IPR002028 (25%) IPR011060 (25%) IPR013785 (25%)" "Tryptophan synthase, alpha chain (25%) Ribulose-phosphate binding barrel (25%) Aldolase-type TIM barrel (25%)" LGHIMWDFVGMAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.5.1 (92.6%) 1.3.5.4 (7.4%)" "succinate dehydrogenase (92.6%) Transferred entry: 1.3.5.1 (7.4%)" GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (12.3%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (12.3%)" "IPR003953 (14.4%) IPR015939 (14.4%) IPR027477 (14.4%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.4%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.4%) Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily (14.4%)" GKEIAEQINILGDDGVPVEYHVIFWK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (22.8%) GO:0046034 (1.8%) GO:1902600 (0.3%)" "GO:0005524 (24.6%) GO:0046961 (24.6%) GO:0046933 (22.8%)" "proton motive force-driven plasma membrane ATP synthesis (22.8%) ATP metabolic process (1.8%) proton transmembrane transport (0.3%)" "ATP binding (24.6%) proton-transporting ATPase activity, rotational mechanism (24.6%) proton-transporting ATP synthase activity, rotational mechanism (22.8%)" "IPR000194 (13.2%) IPR020003 (13.2%) IPR022878 (13.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (13.2%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (13.2%) V-type ATP synthase catalytic alpha chain (13.2%)" SKVLMPSEGYEGVVK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 4.2.1.32 (100%) L(+)-tartrate dehydratase (100%) "GO:0006099 (0.1%) GO:0044010 (0.1%) GO:1901275 (0.1%)" "GO:0005829 (0.1%) GO:1902494 (0.1%)" "GO:0046872 (32.9%) GO:0051539 (32.9%) GO:0016829 (22.5%)" "tricarboxylic acid cycle (0.1%) single-species biofilm formation (0.1%) tartrate metabolic process (0.1%)" "cytosol (0.1%) catalytic complex (0.1%)" "metal ion binding (32.9%) 4 iron, 4 sulfur cluster binding (32.9%) lyase activity (22.5%)" "IPR004646 (50%) IPR051208 (50%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (50%) Class-I Fumarase/Tartrate Dehydratase (50%)" GLNSSYAIYQDATGR Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.1.1.86 (100%) ketol-acid reductoisomerase (NADP(+)) (100%) "GO:0009097 (20.8%) GO:0009099 (20.8%)" GO:0070013 (1.3%) "GO:0004455 (20.8%) GO:0046872 (20.8%) GO:0016853 (15.4%)" "isoleucine biosynthetic process (20.8%) L-valine biosynthetic process (20.8%)" intracellular organelle lumen (1.3%) "ketol-acid reductoisomerase activity (20.8%) metal ion binding (20.8%) isomerase activity (15.4%)" "IPR000506 (16.9%) IPR013023 (16.9%) IPR013116 (16.9%)" "Ketol-acid reductoisomerase, C-terminal (16.9%) Ketol-acid reductoisomerase (16.9%) Ketol-acid reductoisomerase, N-terminal (16.9%)" VLENAGIPYEIFSEIKPNPTVSNVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.77 (100%) lactaldehyde reductase (100%) "GO:0004022 (37.9%) GO:0046872 (37.9%) GO:0008912 (24.1%)" "alcohol dehydrogenase (NAD+) activity (37.9%) metal ion binding (37.9%) lactaldehyde reductase activity (24.1%)" "IPR001670 (20%) IPR013460 (20%) IPR018211 (20%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (20%) Lactaldehyde reductase (20%) Alcohol dehydrogenase, iron-type, conserved site (20%)" TDKNAEPDPVYIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.2%) GO:0009090 (17.2%) GO:0009088 (13.8%)" GO:0005829 (17.2%) "GO:0004072 (17.2%) GO:0005524 (17.2%) GO:0016301 (0.1%)" "lysine biosynthetic process via diaminopimelate (17.2%) homoserine biosynthetic process (17.2%) threonine biosynthetic process (13.8%)" cytosol (17.2%) "aspartate kinase activity (17.2%) ATP binding (17.2%) kinase activity (0.1%)" "IPR001048 (13%) IPR001341 (13%) IPR036393 (13%)" "Aspartate/glutamate/uridylate kinase (13%) Aspartate kinase (13%) Acetylglutamate kinase-like superfamily (13%)" GLSYKDFGTYSSDSCDYPDFAHLMGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.3.1.6 (100%) ribose-5-phosphate isomerase (100%) "GO:0009052 (33.3%) GO:0019316 (33.3%)" GO:0004751 (33.3%) "pentose-phosphate shunt, non-oxidative branch (33.3%) D-allose catabolic process (33.3%)" ribose-5-phosphate isomerase activity (33.3%) "IPR003500 (33.3%) IPR004785 (33.3%) IPR036569 (33.3%)" "Sugar-phosphate isomerase, RpiB/LacA/LacB family (33.3%) Ribose 5-phosphate isomerase B (33.3%) Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily (33.3%)" GKSPALDACPQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20%) GO:0015935 (20%) "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) small ribosomal subunit (20%) "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR005679 (33.3%) IPR006032 (33.3%) IPR012340 (33.3%)" "Ribosomal protein uS12, bacteria (33.3%) Small ribosomal subunit protein uS12 (33.3%) Nucleic acid-binding, OB-fold (33.3%)" VMDIISIVFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.5%) GO:0005737 (16.5%) "GO:0000049 (16.5%) GO:0004829 (16.5%) GO:0005524 (16.5%)" threonyl-tRNA aminoacylation (16.5%) cytoplasm (16.5%) "tRNA binding (16.5%) threonine-tRNA ligase activity (16.5%) ATP binding (16.5%)" "IPR002314 (7.8%) IPR002320 (7.8%) IPR004154 (7.8%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.8%) Threonine-tRNA ligase, class IIa (7.8%) Anticodon-binding (7.8%)" WVILLALTSNK Bacteroidota Bacteria Pseudomonadati Bacteroidota 4.1.1.23 (100%) orotidine-5'-phosphate decarboxylase (100%) "GO:0006207 (33.2%) GO:0044205 (32.8%) GO:0009220 (0.4%)" "GO:0004590 (33.2%) GO:0016829 (0.3%)" "'de novo' pyrimidine nucleobase biosynthetic process (33.2%) 'de novo' UMP biosynthetic process (32.8%) pyrimidine ribonucleotide biosynthetic process (0.4%)" "orotidine-5'-phosphate decarboxylase activity (33.2%) lyase activity (0.3%)" "IPR001754 (25.1%) IPR011995 (25.1%) IPR011060 (24.9%)" "Orotidine 5'-phosphate decarboxylase domain (25.1%) Orotidine 5'-phosphate decarboxylase, type 2 (25.1%) Ribulose-phosphate binding barrel (24.9%)" NAFNIASMSFAPETIYAAIKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.1.3.- (100%) Acting on carbohydrates and derivatives (100%) GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" GPNALAFIQSVTSNDASVLPLGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (16.7%) GO:0032259 (8.3%)" "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004047 (16.7%) GO:0008483 (16.7%) GO:0008168 (8.3%)" "glycine decarboxylation via glycine cleavage system (16.7%) methylation (8.3%)" "cytosol (16.7%) glycine cleavage complex (16.7%)" "aminomethyltransferase activity (16.7%) transaminase activity (16.7%) methyltransferase activity (8.3%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" IEASSGLSKEEIEK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0042026 (0.2%) GO:0051085 (0.2%)" "GO:0005524 (33%) GO:0140662 (33%) GO:0051082 (32.8%)" "protein refolding (0.2%) obsolete chaperone cofactor-dependent protein refolding (0.2%)" "ATP binding (33%) ATP-dependent protein folding chaperone (33%) unfolded protein binding (32.8%)" "IPR013126 (16.7%) IPR029047 (16.7%) IPR029048 (16.7%)" "Heat shock protein 70 family (16.7%) Heat shock protein 70kD, peptide-binding domain superfamily (16.7%) Heat shock protein 70kD, C-terminal domain superfamily (16.7%)" QMEENKAQIAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae TNKKEETSFLQMPEELKTR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR015943 (58.3%) IPR031815 (41.7%)" "WD40/YVTN repeat-like-containing domain superfamily (58.3%) Protein of unknown function DUF5074 (41.7%)" DYDSHRENPKELSGGDKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (25%) GO:0006183 (25%)" "GO:0003938 (25%) GO:0046872 (25%)" "GMP biosynthetic process (25%) GTP biosynthetic process (25%)" "IMP dehydrogenase activity (25%) metal ion binding (25%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" KNPEGANEIINKLEAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17%) GO:0009090 (17%) GO:0009088 (14.9%)" GO:0005829 (17%) "GO:0004072 (17%) GO:0005524 (16.7%) GO:0016301 (0.3%)" "lysine biosynthetic process via diaminopimelate (17%) homoserine biosynthetic process (17%) threonine biosynthetic process (14.9%)" cytosol (17%) "aspartate kinase activity (17%) ATP binding (16.7%) kinase activity (0.3%)" "IPR001048 (12.7%) IPR018042 (12.7%) IPR036393 (12.7%)" "Aspartate/glutamate/uridylate kinase (12.7%) Aspartate kinase, conserved site (12.7%) Acetylglutamate kinase-like superfamily (12.7%)" ILFAENPGIIVQVK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" VQFENPIEPEQVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006605 (20%) GO:0043952 (20%) GO:0065002 (20%)" GO:0005886 (20%) GO:0015450 (20%) "protein targeting (20%) protein transport by the Sec complex (20%) intracellular protein transmembrane transport (20%)" plasma membrane (20%) protein-transporting ATPase activity (20%) "IPR005665 (11.1%) IPR005791 (11.1%) IPR022645 (11.1%)" "Protein-export membrane protein SecF, bacterial (11.1%) Protein translocase subunit SecD (11.1%) Protein-export membrane protein SecD/SecF, bacterial (11.1%)" LAEEDPTFTVK Bacteria Bacteria GO:0032790 (20.4%) GO:0005737 (18.9%) "GO:0003746 (20.5%) GO:0005525 (20.4%) GO:0003924 (19.9%)" ribosome disassembly (20.4%) cytoplasm (18.9%) "translation elongation factor activity (20.5%) GTP binding (20.4%) GTPase activity (19.9%)" "IPR009022 (6.3%) IPR035647 (6.3%) IPR041095 (6.3%)" "Elongation factor G, domain III (6.3%) EF-G domain III/V-like (6.3%) Elongation Factor G, domain II (6.3%)" AIMDSDLGITPENNGEIIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006415 (33.3%) GO:0005737 (33.3%) GO:0043023 (33.3%) translational termination (33.3%) cytoplasm (33.3%) ribosomal large subunit binding (33.3%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" AVESLTQELVAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae AVAGEATQSVADQEAIQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" VIGTDPSTDLALVKIEADELPTIPVGNSEALK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.4.21.- (60%) 3.4.21.107 (40%)" "Serine endopeptidases (60%) peptidase Do (40%)" GO:0006508 (46.4%) "GO:0030313 (3.6%) GO:0042597 (3.6%)" GO:0004252 (46.4%) proteolysis (46.4%) "cell envelope (3.6%) periplasmic space (3.6%)" serine-type endopeptidase activity (46.4%) "IPR001478 (16.9%) IPR001940 (16.9%) IPR009003 (16.9%)" "PDZ domain (16.9%) Peptidase S1C (16.9%) Peptidase S1, PA clan (16.9%)" MHEATDPLYFVIDEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (10%) GO:0008564 (0.8%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (10%) protein-exporting ATPase activity (0.8%)" "IPR000185 (8.1%) IPR011115 (8.1%) IPR011130 (8.1%)" "Protein translocase subunit SecA (8.1%) SecA DEAD-like, N-terminal (8.1%) SecA, preprotein cross-linking domain (8.1%)" GEAVGVIAAQSIGEPGTQLTLR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) "GO:0000428 (17%) GO:0009507 (0%) GO:0031981 (0%)" "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (15.1%)" DNA-templated transcription (17%) "DNA-directed RNA polymerase complex (17%) chloroplast (0%) nuclear lumen (0%)" "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (15.1%)" "IPR007081 (9%) IPR045867 (9%) IPR038120 (8.9%)" "RNA polymerase Rpb1, domain 5 (9%) DNA-directed RNA polymerase, subunit beta-prime (9%) RNA polymerase Rpb1, funnel domain superfamily (8.9%)" KVVMTGPSKDNTPMFVK root "1.2.1.- (83.5%) 1.2.1.12 (16.5%)" "With NAD(+) or NADP(+) as acceptor (83.5%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (16.5%)" "GO:0072524 (19.4%) GO:0006006 (16.5%) GO:0006096 (1.3%)" "GO:0005737 (0.9%) GO:0005576 (0.2%) GO:0005829 (0.2%)" "GO:0051287 (21.8%) GO:0050661 (16.5%) GO:0004365 (13.5%)" "pyridine-containing compound metabolic process (19.4%) glucose metabolic process (16.5%) glycolytic process (1.3%)" "cytoplasm (0.9%) extracellular region (0.2%) cytosol (0.2%)" "NAD binding (21.8%) NADP binding (16.5%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (13.5%)" "IPR020828 (17.6%) IPR020831 (17.6%) IPR036291 (17.6%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17.6%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.6%) NAD(P)-binding domain superfamily (17.6%)" QVIIPLSQHIGAPAQAVVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 7.-.-.- (100%) Translocases (100%) GO:0022900 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0046872 (20%) GO:0051539 (20%)" electron transport chain (20%) plasma membrane (20%) "electron transfer activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR010208 (14.3%) IPR011538 (14.3%) IPR017896 (14.3%)" "Ion-translocating oxidoreductase complex, subunit RnfC/RsxC (14.3%) NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain (14.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14.3%)" AQAVVNALVKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (25%) IPR006665 (25%) IPR036737 (25%)" "Outer membrane protein, bacterial (25%) OmpA-like domain (25%) OmpA-like domain superfamily (25%)" NMEIVSIPLK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.13.11.24 (100%) quercetin 2,3-dioxygenase (100%) "GO:0046872 (90%) GO:0008127 (10%)" "metal ion binding (90%) quercetin 2,3-dioxygenase activity (10%)" "IPR003829 (20.2%) IPR012093 (20.2%) IPR041602 (20.2%)" "Pirin, N-terminal domain (20.2%) Pirin (20.2%) Quercetin 2,3-dioxygenase, C-terminal cupin domain (20.2%)" YLNELKETTQSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002319 (14.3%) IPR004188 (14.3%) IPR004529 (14.3%)" "Phenylalanyl-tRNA synthetase (14.3%) Phenylalanine-tRNA ligase, class II, N-terminal (14.3%) Phenylalanyl-tRNA synthetase, class IIc, alpha subunit (14.3%)" AANAGGVSVSGLEMTQNSIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.3 (100%) glutamate dehydrogenase [NAD(P)(+)] (100%) GO:0006537 (25.3%) GO:0005829 (25.3%) "GO:0004354 (25.3%) GO:0000166 (23.7%) GO:0004352 (0.2%)" glutamate biosynthetic process (25.3%) cytosol (25.3%) "glutamate dehydrogenase (NADP+) activity (25.3%) nucleotide binding (23.7%) glutamate dehydrogenase (NAD+) activity (0.2%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" DLTIWQISGDGDGLAIGGNHFIHAVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.-.- (50%) 1.2.7.3 (50%)" "Acting on the aldehyde or oxo group of donors (50%) 2-oxoglutarate synthase (50%)" GO:0044281 (32.9%) "GO:0016625 (32.9%) GO:0030976 (32.9%) GO:0016491 (1.2%)" small molecule metabolic process (32.9%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (32.9%) thiamine pyrophosphate binding (32.9%) oxidoreductase activity (1.2%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" GKENSEWVEGAAAVLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" YFISTLESGSGQGKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0004521 (50%) GO:0016787 (50%)" "RNA endonuclease activity (50%) hydrolase activity (50%)" "IPR005229 (33.3%) IPR013527 (33.3%) IPR013551 (33.3%)" "Endoribonuclease YicC/YloC-like (33.3%) Endoribonuclease YicC-like, N-terminal (33.3%) Endoribonuclease YicC-like, C-terminal (33.3%)" MNIGQIFEAVLGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (19.9%) GO:0000428 (20.1%) "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (19.9%)" DNA-templated transcription (19.9%) DNA-directed RNA polymerase complex (20.1%) "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (19.9%)" "IPR007120 (8%) IPR015712 (8%) IPR037033 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (8%) DNA-directed RNA polymerase, subunit 2 (8%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily (7.9%)" SEDKEVVSAAEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0017004 (25%) GO:0030313 (25%) "GO:0016209 (25%) GO:0016491 (25%)" cytochrome complex assembly (25%) cell envelope (25%) "antioxidant activity (25%) oxidoreductase activity (25%)" "IPR000866 (16.7%) IPR013766 (16.7%) IPR017937 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Thioredoxin, conserved site (16.7%)" IMIDPELAGVIAEQHLETVKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" AIEELNQAEYEGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0003723 (63.6%) GO:0003729 (36.4%)" "RNA binding (63.6%) mRNA binding (36.4%)" "IPR000504 (25%) IPR012677 (25%) IPR035979 (25%)" "RNA recognition motif domain (25%) Nucleotide-binding alpha-beta plait domain superfamily (25%) RNA-binding domain superfamily (25%)" YNPALEAEGKNPFTLDSKEPDWSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.7.1 (83.3%) 1.2.7.- (16.7%)" "pyruvate synthase (83.3%) With an iron-sulfur protein as acceptor (16.7%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (13%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (13%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" NLGVAAPLIVNPGSEQIR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" FFSELAGVEEPEKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (12.5%) IPR004739 (12.5%) IPR014729 (12.5%)" "GMP synthase, C-terminal (12.5%) GMP synthase, glutamine amidotransferase (12.5%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" LYNECNEDEQKAIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0015031 (33.3%) GO:0005886 (33.3%) GO:0022857 (33.3%) protein transport (33.3%) plasma membrane (33.3%) transmembrane transporter activity (33.3%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) LVSYAQGFSLLYQASK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" VGVLQGTTQETFGNEHWAPK root 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (49.2%) GO:1903810 (0.1%)" "GO:0030288 (50%) GO:0016020 (0.1%) GO:0055052 (0.1%)" "GO:0005524 (0.2%) GO:0016597 (0.2%) GO:0016787 (0.1%)" "amino acid transport (49.2%) L-histidine import across plasma membrane (0.1%)" "outer membrane-bounded periplasmic space (50%) membrane (0.1%) ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing (0.1%)" "ATP binding (0.2%) amino acid binding (0.2%) hydrolase activity (0.1%)" "IPR001638 (34.1%) IPR018313 (33.4%) IPR005768 (32.5%)" "Solute-binding protein family 3/N-terminal domain of MltF (34.1%) Solute-binding protein family 3, conserved site (33.4%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (32.5%)" DVSLLHKPTTQISDFHVATR root 3.2.1.23 (100%) beta-galactosidase (100%) "GO:0005990 (20.3%) GO:0005975 (0.3%) GO:0006091 (0.2%)" "GO:0009341 (20.7%) GO:0005764 (0.2%)" "GO:0004565 (20.7%) GO:0030246 (18.1%) GO:0000287 (17%)" "lactose catabolic process (20.3%) carbohydrate metabolic process (0.3%) generation of precursor metabolites and energy (0.2%)" "beta-galactosidase complex (20.7%) lysosome (0.2%)" "beta-galactosidase activity (20.7%) carbohydrate binding (18.1%) magnesium ion binding (17%)" "IPR013783 (6.6%) IPR036156 (6.6%) IPR050347 (6.6%)" "Immunoglobulin-like fold (6.6%) Beta-Galactosidase/glucuronidase domain superfamily (6.6%) Bacterial Beta-galactosidase (6.6%)" TAIAIDAIINQR root "7.1.2.2 (96.4%) 3.6.3.14 (3.5%) 3.6.3.- (0.1%)" "H(+)-transporting two-sector ATPase (96.4%) Transferred entry: 7.1.2.2 (3.5%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (0.1%)" "GO:0015986 (0.1%) GO:0042777 (0%)" "GO:0045259 (19%) GO:0005886 (18.5%) GO:0005743 (0.1%)" "GO:0005524 (19%) GO:0046933 (19%) GO:0043531 (18.9%)" "proton motive force-driven ATP synthesis (0.1%) proton motive force-driven plasma membrane ATP synthesis (0%)" "proton-transporting ATP synthase complex (19%) plasma membrane (18.5%) mitochondrial inner membrane (0.1%)" "ATP binding (19%) proton-transporting ATP synthase activity, rotational mechanism (19%) ADP binding (18.9%)" "IPR000194 (10.1%) IPR005294 (10.1%) IPR027417 (10.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%) ATP synthase, F1 complex, alpha subunit (10.1%) P-loop containing nucleoside triphosphate hydrolase (10.1%)" IVSVPSEGLFR Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.2.1.1 (98%) 2.2.1.- (2%)" "transketolase (98%) Transketolases and transaldolases (2%)" GO:0006098 (25%) "GO:0005829 (25%) GO:0016020 (0.3%)" "GO:0004802 (25%) GO:0046872 (24.6%) GO:0047896 (0.1%)" pentose-phosphate shunt (25%) "cytosol (25%) membrane (0.3%)" "transketolase activity (25%) metal ion binding (24.6%) formaldehyde transketolase activity (0.1%)" "IPR033247 (13.1%) IPR055152 (13.1%) IPR009014 (13%)" "Transketolase family (13.1%) Transketolase-like, C-terminal domain (13.1%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (13%)" KIVINQGLGMATADKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (17.2%) "GO:0005840 (17.2%) GO:1990904 (17.2%)" "GO:0003735 (17.2%) GO:0000049 (15.6%) GO:0019843 (15.6%)" translation (17.2%) "ribosome (17.2%) ribonucleoprotein complex (17.2%)" "structural constituent of ribosome (17.2%) tRNA binding (15.6%) rRNA binding (15.6%)" "IPR002132 (20%) IPR020930 (20%) IPR022803 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5, bacteria (20%) Large ribosomal subunit protein uL5 domain superfamily (20%)" VQVILECTEHKESGMPGMSR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20%) "GO:0005737 (20%) GO:0005840 (20%) GO:1990904 (20%)" GO:0003735 (20%) translation (20%) "cytoplasm (20%) ribosome (20%) ribonucleoprotein complex (20%)" structural constituent of ribosome (20%) "IPR001705 (33.3%) IPR011332 (33.3%) IPR038584 (33.3%)" "Large ribosomal subunit protein bL33 (33.3%) Zinc-binding ribosomal protein (33.3%) Large ribosomal subunit protein bL33 superfamily (33.3%)" WAFAAKPGEVSGLYECGESDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR027304 (33.3%) IPR046357 (33.3%) IPR052029 (33.3%)" "Trigger factor/SurA domain superfamily (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) Periplasmic chaperone PpiD (33.3%)" VSLTPAGAHELVQR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.1.1 (100%) alanine dehydrogenase (100%) GO:0042853 (25.8%) GO:0005886 (25.8%) "GO:0000286 (25.8%) GO:0000166 (22.5%)" L-alanine catabolic process (25.8%) plasma membrane (25.8%) "alanine dehydrogenase activity (25.8%) nucleotide binding (22.5%)" "IPR007698 (20%) IPR007886 (20%) IPR008141 (20%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (20%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (20%) Alanine dehydrogenase (20%)" GYSPDWIQYIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" GANHQCAPIPEEGKWVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides YVPCSHCHGTGAEGNSGSETCPTCK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0006260 (12.6%) GO:0042026 (12.6%) GO:0009408 (11.7%)" GO:0005737 (12.6%) "GO:0008270 (12.6%) GO:0031072 (12.6%) GO:0051082 (12.6%)" "DNA replication (12.6%) protein refolding (12.6%) response to heat (11.7%)" cytoplasm (12.6%) "zinc ion binding (12.6%) heat shock protein binding (12.6%) unfolded protein binding (12.6%)" "IPR001305 (12.6%) IPR001623 (12.6%) IPR002939 (12.6%)" "Heat shock protein DnaJ, cysteine-rich domain (12.6%) DnaJ domain (12.6%) Chaperone DnaJ, C-terminal (12.6%)" TLFSSTHTIEQELPTTDLVIGAVLIPGAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.1.1 (100%) alanine dehydrogenase (100%) GO:0042853 (25%) GO:0005886 (25%) "GO:0000166 (25%) GO:0000286 (25%)" L-alanine catabolic process (25%) plasma membrane (25%) "nucleotide binding (25%) alanine dehydrogenase activity (25%)" "IPR007698 (16.7%) IPR007886 (16.7%) IPR008141 (16.7%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (16.7%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (16.7%) Alanine dehydrogenase (16.7%)" EIVGNESQER Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.1%) GO:0006164 (1%)" GO:0005737 (20.1%) "GO:0004642 (20.1%) GO:0005524 (19.9%) GO:0046872 (19.9%)" "'de novo' IMP biosynthetic process (19.1%) purine nucleotide biosynthetic process (1%)" cytoplasm (20.1%) "phosphoribosylformylglycinamidine synthase activity (20.1%) ATP binding (19.9%) metal ion binding (19.9%)" "IPR010918 (11.3%) IPR036676 (11.3%) IPR036604 (11.2%)" "PurM-like, C-terminal domain (11.3%) PurM-like, C-terminal domain superfamily (11.3%) Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily (11.2%)" TGDDAGDGTTTATVLAQSIVGVGLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.6%) GO:0005737 (15.2%) "GO:0005524 (17.6%) GO:0140662 (17.6%) GO:0016853 (17%)" protein refolding (17.6%) cytoplasm (15.2%) "ATP binding (17.6%) ATP-dependent protein folding chaperone (17.6%) isomerase activity (17%)" "IPR001844 (17.2%) IPR002423 (17.2%) IPR027409 (16.6%)" "Chaperonin Cpn60/GroEL (17.2%) Chaperonin Cpn60/GroEL/TCP-1 family (17.2%) GroEL-like apical domain superfamily (16.6%)" HVLIVYDDLTK root 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) GO:0015986 (0.1%) "GO:0045259 (19.2%) GO:0005886 (18.6%)" "GO:0005524 (19.2%) GO:0043531 (19.2%) GO:0046933 (19.2%)" proton motive force-driven ATP synthesis (0.1%) "proton-transporting ATP synthase complex (19.2%) plasma membrane (18.6%)" "ATP binding (19.2%) ADP binding (19.2%) proton-transporting ATP synthase activity, rotational mechanism (19.2%)" "IPR000194 (10.3%) IPR005294 (10.3%) IPR027417 (10.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.3%) ATP synthase, F1 complex, alpha subunit (10.3%) P-loop containing nucleoside triphosphate hydrolase (10.2%)" IGNNLQADPVGVAGSHIEGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0043093 (32.8%) GO:0051301 (1.5%)" "GO:0009898 (32.8%) GO:0032153 (32.8%)" "FtsZ-dependent cytokinesis (32.8%) cell division (1.5%)" "cytoplasmic side of plasma membrane (32.8%) cell division site (32.8%)" "IPR003494 (25%) IPR020823 (25%) IPR043129 (25%)" "SHS2 domain inserted in FtsA (25%) Cell division protein FtsA (25%) ATPase, nucleotide binding domain (25%)" GGCDVAFVVDPDVDR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.10 (76.9%) 5.4.2.2 (15.4%) 5.4.2.8 (7.7%)" "phosphoglucosamine mutase (76.9%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (15.4%) phosphomannomutase (7.7%)" "GO:0005975 (14.1%) GO:0006048 (14.1%) GO:0009252 (14.1%)" GO:0005829 (14.1%) "GO:0004615 (14.1%) GO:0008966 (14.1%) GO:0000287 (13.5%)" "carbohydrate metabolic process (14.1%) UDP-N-acetylglucosamine biosynthetic process (14.1%) peptidoglycan biosynthetic process (14.1%)" cytosol (14.1%) "phosphomannomutase activity (14.1%) phosphoglucosamine mutase activity (14.1%) magnesium ion binding (13.5%)" "IPR005845 (10.3%) IPR005846 (10.3%) IPR016055 (10.3%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (10.3%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (10.3%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (10.3%)" TVDGPSMKDWR root "1.2.1.- (63.7%) 1.2.1.12 (36.1%) 1.2.1.13 (0.1%)" "With NAD(+) or NADP(+) as acceptor (63.7%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (36.1%) glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) (0.1%)" "GO:0006096 (17.5%) GO:0006006 (12.4%) GO:0072524 (0.1%)" "GO:0005829 (15.4%) GO:0032991 (1.2%) GO:0005737 (1%)" "GO:0004365 (18.3%) GO:0051287 (14.1%) GO:0050661 (12.5%)" "glycolytic process (17.5%) glucose metabolic process (12.4%) pyridine-containing compound metabolic process (0.1%)" "cytosol (15.4%) protein-containing complex (1.2%) cytoplasm (1%)" "glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (18.3%) NAD binding (14.1%) NADP binding (12.5%)" "IPR020829 (20.1%) IPR020831 (20.1%) IPR036291 (15.7%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (20.1%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (20.1%) NAD(P)-binding domain superfamily (15.7%)" NAEFLQAYGVAIADGPLK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.11.1.24 (97.7%) 1.11.1.- (2.3%)" "thioredoxin-dependent peroxiredoxin (97.7%) Peroxidases (2.3%)" GO:0034599 (46.7%) "GO:0005829 (0.6%) GO:0042597 (0.6%)" "GO:0008379 (49.1%) GO:0004601 (2.4%) GO:0032843 (0.6%)" cellular response to oxidative stress (46.7%) "cytosol (0.6%) periplasmic space (0.6%)" "thioredoxin peroxidase activity (49.1%) peroxidase activity (2.4%) hydroperoxide reductase activity (0.6%)" "IPR013740 (16.8%) IPR036249 (16.8%) IPR050455 (16.8%)" "Redoxin (16.8%) Thioredoxin-like superfamily (16.8%) Thiol Peroxidase Tpx Subfamily (16.8%)" AIAIVNEAAQNPAGLILTLDDDFVFNK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR024302 (47.5%) IPR041662 (2.5%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (47.5%) SusD-like 2 (2.5%)" STSIDVFGLHVLEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.6.5.- (54.2%) 2.7.-.- (27.7%) 3.6.-.- (18.1%)" "Acting on GTP; involved in cellular and subcellular movement (54.2%) Transferring phosphorus-containing groups (27.7%) Acting on acid anhydrides (18.1%)" GO:0005737 (30.1%) "GO:0003924 (30.4%) GO:0005525 (30.4%) GO:0016740 (5.2%)" cytoplasm (30.1%) "GTPase activity (30.4%) GTP binding (30.4%) transferase activity (5.2%)" "IPR005129 (50.2%) IPR027417 (49.8%)" "SIMIBI class G3E GTPase, ArgK/MeaB (50.2%) P-loop containing nucleoside triphosphate hydrolase (49.8%)" ALALKSEEFMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.2 (100%) fumarate hydratase (100%) "GO:0006099 (20%) GO:0006106 (20%) GO:0006108 (20%)" GO:0005737 (20%) GO:0004333 (20%) "tricarboxylic acid cycle (20%) fumarate metabolic process (20%) malate metabolic process (20%)" cytoplasm (20%) fumarate hydratase activity (20%) "IPR000362 (14.3%) IPR005677 (14.3%) IPR008948 (14.3%)" "Fumarate lyase family (14.3%) Fumarate hydratase, class II (14.3%) L-Aspartase-like (14.3%)" IILLGAPGAGKGTQAQFIMEK root "2.7.4.3 (99.9%) 2.7.4.- (0.1%)" "adenylate kinase (99.9%) Phosphotransferases with a phosphate group as acceptor (0.1%)" "GO:0044209 (24.3%) GO:0009123 (0.1%) GO:0009132 (0.1%)" "GO:0005737 (24.8%) GO:0005829 (0.1%) GO:0005758 (0%)" "GO:0005524 (24.9%) GO:0004017 (24.8%) GO:0016301 (0.3%)" "AMP salvage (24.3%) nucleoside monophosphate metabolic process (0.1%) nucleoside diphosphate metabolic process (0.1%)" "cytoplasm (24.8%) cytosol (0.1%) mitochondrial intermembrane space (0%)" "ATP binding (24.9%) AMP kinase activity (24.8%) kinase activity (0.3%)" "IPR027417 (20.1%) IPR000850 (20.1%) IPR033690 (19.9%)" "P-loop containing nucleoside triphosphate hydrolase (20.1%) Adenylate kinase/UMP-CMP kinase (20.1%) Adenylate kinase, conserved site (19.9%)" IGIMFGNPETTTGGNALK root 2.7.4.25 (100%) (d)CMP kinase (100%) "GO:0006281 (12.8%) GO:0006310 (12.8%) GO:0009432 (10.5%)" "GO:0005829 (12.8%) GO:0015935 (0.2%) GO:0016020 (0.2%)" "GO:0003697 (12.8%) GO:0005524 (12.8%) GO:0140664 (12.6%)" "DNA repair (12.8%) DNA recombination (12.8%) SOS response (10.5%)" "cytosol (12.8%) small ribosomal subunit (0.2%) membrane (0.2%)" "single-stranded DNA binding (12.8%) ATP binding (12.8%) ATP-dependent DNA damage sensor activity (12.6%)" "IPR013765 (11.2%) IPR020587 (11.2%) IPR027417 (11.2%)" "DNA recombination and repair protein RecA (11.2%) DNA recombination and repair protein RecA, monomer-monomer interface (11.2%) P-loop containing nucleoside triphosphate hydrolase (11.2%)" NDIEIVGINDLCPVDYLAYMLK Pseudomonadati Bacteria Pseudomonadati 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0006006 (25%) "GO:0050661 (25%) GO:0051287 (25%) GO:0004365 (19.4%)" glucose metabolic process (25%) "NADP binding (25%) NAD binding (25%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (19.4%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" LVPHQDHHVISK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "3.4.13.- (66.7%) 3.5.1.18 (33.3%)" "Dipeptidases (66.7%) succinyl-diaminopimelate desuccinylase (33.3%)" "GO:0046872 (48.5%) GO:0016787 (39.4%) GO:0009014 (6.1%)" "metal ion binding (48.5%) hydrolase activity (39.4%) succinyl-diaminopimelate desuccinylase activity (6.1%)" "IPR002933 (33.3%) IPR011650 (33.3%) IPR051458 (33.3%)" "Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%) Cytosolic and Metallo Dipeptidase (33.3%)" AVVAELQKIPEIVECHFTTGPYTMLTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0043200 (33.3%) GO:0005829 (33.3%) GO:0043565 (33.3%) response to amino acid (33.3%) cytosol (33.3%) sequence-specific DNA binding (33.3%) "IPR000485 (16.7%) IPR011008 (16.7%) IPR019887 (16.7%)" "AsnC-type HTH domain (16.7%) Dimeric alpha-beta barrel (16.7%) Transcription regulator AsnC/Lrp, ligand binding domain (16.7%)" DVFMGVDELQVGMR root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0042026 (24.9%) GO:0009408 (0%) GO:0050821 (0%)" "GO:0005737 (24.8%) GO:0005829 (0.1%)" "GO:0003755 (24.9%) GO:0046872 (24.8%) GO:0016853 (0.4%)" "protein refolding (24.9%) response to heat (0%) protein stabilization (0%)" "cytoplasm (24.8%) cytosol (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (24.9%) metal ion binding (24.8%) isomerase activity (0.4%)" "IPR046357 (33.4%) IPR048261 (33.4%) IPR001179 (33.2%)" "Peptidyl-prolyl cis-trans isomerase domain superfamily (33.4%) PPIase chaperone SlpA/SlyD-like, insertion domain superfamily (33.4%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (33.2%)" QSVDQPVQTGYK root "7.1.2.2 (96.9%) 3.6.3.14 (3%) 3.6.3.- (0.1%)" "H(+)-transporting two-sector ATPase (96.9%) Transferred entry: 7.1.2.2 (3%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (0.1%)" "GO:0015986 (0%) GO:0042777 (0%)" "GO:0045259 (19%) GO:0005886 (18.8%) GO:0005739 (0%)" "GO:0005524 (19%) GO:0043531 (19%) GO:0046933 (19%)" "proton motive force-driven ATP synthesis (0%) proton motive force-driven plasma membrane ATP synthesis (0%)" "proton-transporting ATP synthase complex (19%) plasma membrane (18.8%) mitochondrion (0%)" "ATP binding (19%) ADP binding (19%) proton-transporting ATP synthase activity, rotational mechanism (19%)" "IPR005294 (10.2%) IPR027417 (10.1%) IPR000194 (10.1%)" "ATP synthase, F1 complex, alpha subunit (10.2%) P-loop containing nucleoside triphosphate hydrolase (10.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%)" EKPELPSVSDIWK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "7.1.1.- (95.2%) 1.6.5.11 (4.8%)" "Hydron translocation or charge separation linked to oxidoreductase reactions (95.2%) Transferred entry: 1.6.5.9 (4.8%)" "GO:0005886 (15.7%) GO:0030964 (11%) GO:0005737 (10.2%)" "GO:0008137 (15.7%) GO:0048038 (15.7%) GO:0050136 (15.7%)" "plasma membrane (15.7%) NADH dehydrogenase complex (11%) cytoplasm (10.2%)" "NADH dehydrogenase (ubiquinone) activity (15.7%) quinone binding (15.7%) NADH dehydrogenase (quinone) (non-electrogenic) activity (15.7%)" "IPR001135 (17.5%) IPR001268 (17.5%) IPR022885 (17.5%)" "NADH-quinone oxidoreductase, subunit D (17.5%) NADH:ubiquinone oxidoreductase, 30kDa subunit (17.5%) NAD(P)H-quinone oxidoreductase subunit D/H (17.5%)" HFESTPDTPEIIATIHGEGYR root "GO:0006355 (20.1%) GO:0000160 (0.6%) GO:0045892 (0%)" "GO:0005829 (19.5%) GO:0032993 (19.5%) GO:0005737 (0%)" "GO:0000156 (19.5%) GO:0000976 (19.5%) GO:0003677 (0.6%)" "regulation of DNA-templated transcription (20.1%) phosphorelay signal transduction system (0.6%) negative regulation of DNA-templated transcription (0%)" "cytosol (19.5%) protein-DNA complex (19.5%) cytoplasm (0%)" "phosphorelay response regulator activity (19.5%) transcription cis-regulatory region binding (19.5%) DNA binding (0.6%)" "IPR001867 (16.8%) IPR016032 (16.8%) IPR036388 (16.8%)" "OmpR/PhoB-type DNA-binding domain (16.8%) Signal transduction response regulator, C-terminal effector (16.8%) Winged helix-like DNA-binding domain superfamily (16.8%)" SRPQLLAEFAGDIK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (25%) GO:0015934 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR001790 (20%) IPR002363 (20%) IPR022973 (20%)" "Large ribosomal subunit protein uL10 (20%) Large ribosomal subunit protein uL10, conserved site, bacteria (20%) Large ribosomal subunit protein uL10, bacteria (20%)" FLGFEQTFK root "1.4.1.4 (96%) 1.4.1.2 (3.3%) 1.-.-.- (0.2%)" "glutamate dehydrogenase (NADP(+)) (96%) glutamate dehydrogenase (3.3%) Oxidoreductases (0.2%)" "GO:0006537 (25.1%) GO:0006536 (0%)" "GO:0005829 (25.1%) GO:0009986 (0.2%) GO:0005737 (0%)" "GO:0004354 (25.1%) GO:0000166 (23%) GO:0004352 (1.2%)" "glutamate biosynthetic process (25.1%) glutamate metabolic process (0%)" "cytosol (25.1%) cell surface (0.2%) cytoplasm (0%)" "glutamate dehydrogenase (NADP+) activity (25.1%) nucleotide binding (23%) glutamate dehydrogenase (NAD+) activity (1.2%)" "IPR006097 (11.5%) IPR050724 (11.5%) IPR046346 (11.5%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.5%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.5%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.5%)" GLQEAIQMLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.3.5.1 (90.9%) 1.3.5.4 (9.1%)" "succinate dehydrogenase (90.9%) Transferred entry: 1.3.5.1 (9.1%)" GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (15.6%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (15.6%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" CILTSDDENNLVGLENHWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.-.-.- (100%) Hydrolases (100%) GO:0005829 (25%) "GO:0000287 (25%) GO:0016289 (25%) GO:0016791 (25%)" cytosol (25%) "magnesium ion binding (25%) acyl-CoA hydrolase activity (25%) phosphatase activity (25%)" "IPR000150 (14.3%) IPR003736 (14.3%) IPR006379 (14.3%)" "Cof family (14.3%) Phenylacetic acid degradation-related domain (14.3%) HAD-superfamily hydrolase, subfamily IIB (14.3%)" AIFNPEDLNALEQALR Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) "GO:0009055 (97.3%) GO:0016491 (2.2%) GO:0003677 (0.2%)" "electron transfer activity (97.3%) oxidoreductase activity (2.2%) DNA binding (0.2%)" "IPR014729 (21.1%) IPR012255 (21%) IPR014730 (21%)" "Rossmann-like alpha/beta/alpha sandwich fold (21.1%) Electron transfer flavoprotein, beta subunit (21%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (21%)" NRGTVNMEEESEKPEESAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.6.2.1 (100%) DNA topoisomerase (100%) GO:0006265 (25.6%) "GO:0003677 (25.6%) GO:0003917 (25.6%) GO:0046872 (23.3%)" DNA topological change (25.6%) "DNA binding (25.6%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25.6%) metal ion binding (23.3%)" "IPR000380 (7.4%) IPR003602 (7.4%) IPR013497 (7.4%)" "DNA topoisomerase, type IA (7.4%) DNA topoisomerase, type IA, DNA-binding domain (7.4%) DNA topoisomerase, type IA, central (7.4%)" VLNDKFGIVK root "1.2.1.- (93.7%) 1.2.1.12 (4.2%) 1.2.1.13 (2.1%)" "With NAD(+) or NADP(+) as acceptor (93.7%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (4.2%) glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) (2.1%)" "GO:0006006 (21.7%) GO:0006096 (6%)" "GO:0005737 (6.1%) GO:0005829 (0.2%)" "GO:0051287 (21.8%) GO:0050661 (21.7%) GO:0016620 (17.5%)" "glucose metabolic process (21.7%) glycolytic process (6%)" "cytoplasm (6.1%) cytosol (0.2%)" "NAD binding (21.8%) NADP binding (21.7%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (17.5%)" "IPR020829 (17%) IPR020831 (17%) IPR020828 (16.5%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.5%)" AAEAAYTGTQAPVEEMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" TYAGFELTPEEMNALNNCKDYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50%) GO:0046872 (50%)" "alkaline phosphatase activity (50%) metal ion binding (50%)" "IPR001952 (50%) IPR017850 (50%)" "Alkaline phosphatase (50%) Alkaline-phosphatase-like, core domain superfamily (50%)" EVELADAFQNTGAQLVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.4%) GO:0005737 (15.6%) "GO:0005524 (17.4%) GO:0140662 (17.4%) GO:0016853 (16.5%)" protein refolding (17.4%) cytoplasm (15.6%) "ATP binding (17.4%) ATP-dependent protein folding chaperone (17.4%) isomerase activity (16.5%)" "IPR001844 (17.3%) IPR002423 (17.3%) IPR018370 (16.4%)" "Chaperonin Cpn60/GroEL (17.3%) Chaperonin Cpn60/GroEL/TCP-1 family (17.3%) Chaperonin Cpn60, conserved site (16.4%)" LGVYTIEDYEAGNCQKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.7%) IPR012910 (12.7%) IPR023996 (12.7%)" "TonB-dependent receptor-like, beta-barrel (12.7%) TonB-dependent receptor, plug domain (12.7%) TonB-dependent outer membrane protein, SusC/RagA (12.7%)" LDDGTTAESTR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (46.4%) GO:0019288 (0.5%) GO:0042026 (0.5%)" "GO:0005737 (0.5%) GO:0005829 (0.5%)" "GO:0003755 (46.9%) GO:0016853 (2.4%) GO:0046872 (0.5%)" "protein folding (46.4%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (0.5%) protein refolding (0.5%)" "cytoplasm (0.5%) cytosol (0.5%)" "peptidyl-prolyl cis-trans isomerase activity (46.9%) isomerase activity (2.4%) metal ion binding (0.5%)" "IPR001179 (33.8%) IPR046357 (33.8%) IPR048261 (32.1%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (33.8%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.8%) PPIase chaperone SlpA/SlyD-like, insertion domain superfamily (32.1%)" AAVPSGASTGENEAIELRDGDKNR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" VTWVDDKGEVQTNLGYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.4.1.4 (83.3%) 1.4.1.2 (11.1%) 1.4.1.- (5.6%)" "glutamate dehydrogenase (NADP(+)) (83.3%) glutamate dehydrogenase (11.1%) With NAD(+) or NADP(+) as acceptor (5.6%)" GO:0006537 (25.7%) GO:0005829 (25.7%) "GO:0004354 (25.7%) GO:0000166 (22.4%) GO:0004352 (0.2%)" glutamate biosynthetic process (25.7%) cytosol (25.7%) "glutamate dehydrogenase (NADP+) activity (25.7%) nucleotide binding (22.4%) glutamate dehydrogenase (NAD+) activity (0.2%)" "IPR006097 (11.3%) IPR046346 (11.3%) IPR050724 (11.3%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.3%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.3%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.3%)" EETKCFAFLAGHESFAAAEGAIK Bacteria Bacteria IPR025964 (100%) GGGtGRT protein (100%) EVTLAGKLPQESAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0005615 (50%) GO:0031012 (50%)" "extracellular space (50%) extracellular matrix (50%)" IPR050149 (100%) Collagen superfamily (100%) GKLYVVPTPVGNLEDMTFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.1.198 (100%) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase (100%) "GO:0032259 (2.8%) GO:0006364 (1%)" GO:0005737 (47.2%) "GO:0070677 (46.2%) GO:0008168 (2.8%)" "methylation (2.8%) rRNA processing (1%)" cytoplasm (47.2%) "rRNA (cytosine-2'-O-)-methyltransferase activity (46.2%) methyltransferase activity (2.8%)" "IPR000878 (16.8%) IPR008189 (16.8%) IPR014777 (16.8%)" "Tetrapyrrole methylase (16.8%) rRNA small subunit methyltransferase I (16.8%) Tetrapyrrole methylase, subdomain 1 (16.8%)" YRIQAVPTFIIFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0045454 (33.1%) "GO:0005829 (33.1%) GO:0005737 (0.7%)" GO:0015035 (33.1%) cell redox homeostasis (33.1%) "cytosol (33.1%) cytoplasm (0.7%)" protein-disulfide reductase activity (33.1%) "IPR013766 (25.3%) IPR036249 (25.3%) IPR005746 (24.7%)" "Thioredoxin domain (25.3%) Thioredoxin-like superfamily (25.3%) Thioredoxin (24.7%)" VDRLEGLKENVICGHLIPAGTGQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) GO:0000428 (16.9%) "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (16%)" DNA-templated transcription (16.9%) DNA-directed RNA polymerase complex (16.9%) "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (16%)" "IPR007081 (9.3%) IPR045867 (9.3%) IPR000722 (9%)" "RNA polymerase Rpb1, domain 5 (9.3%) DNA-directed RNA polymerase, subunit beta-prime (9.3%) RNA polymerase, alpha subunit (9%)" FISACDYFFEQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR007139 (100%) Protein of unknown function DUF349 (100%) TISSVINSFFGTNALSQFMDQTNPLAEITHK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20.8%) GO:0000428 (20.9%) "GO:0003677 (20.8%) GO:0003899 (20.8%) GO:0032549 (16.6%)" DNA-templated transcription (20.8%) DNA-directed RNA polymerase complex (20.9%) "DNA binding (20.8%) DNA-directed RNA polymerase activity (20.8%) ribonucleoside binding (16.6%)" "IPR007645 (9.6%) IPR010243 (7.6%) IPR015712 (7.6%)" "RNA polymerase Rpb2, domain 3 (9.6%) DNA-directed RNA polymerase beta subunit, bacterial-type (7.6%) DNA-directed RNA polymerase, subunit 2 (7.6%)" LLVSELKDSDAAVLGASALAWELK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (59.3%) GO:0004340 (40.7%)" "kinase activity (59.3%) glucokinase activity (40.7%)" "IPR000600 (33.6%) IPR043129 (33.6%) IPR049874 (32.9%)" "ROK family (33.6%) ATPase, nucleotide binding domain (33.6%) ROK, conserved site (32.9%)" QPVQQRPMPQQNAAEAAPVQER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.3%) GO:0005829 (14.3%) "GO:0003723 (14.3%) GO:0004386 (14.3%) GO:0005524 (14.3%)" DNA-templated transcription termination (14.3%) cytosol (14.3%) "RNA binding (14.3%) helicase activity (14.3%) ATP binding (14.3%)" "IPR000194 (10%) IPR003593 (10%) IPR004665 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) Transcription termination factor Rho (10%)" VAEPQFEGQTK root "5.6.2.2 (99.8%) 5.99.1.3 (0.2%)" "DNA topoisomerase (ATP-hydrolyzing) (99.8%) Transferred entry: 5.6.2.2 (0.2%)" "GO:0006265 (15.3%) GO:0006261 (9.1%) GO:0032259 (0.1%)" "GO:0005737 (10.4%) GO:0005694 (9.3%)" "GO:0003677 (15.3%) GO:0005524 (15.3%) GO:0046872 (9.8%)" "DNA topological change (15.3%) DNA-templated DNA replication (9.1%) methylation (0.1%)" "cytoplasm (10.4%) chromosome (9.3%)" "DNA binding (15.3%) ATP binding (15.3%) metal ion binding (9.8%)" "IPR013506 (8.4%) IPR014721 (8.4%) IPR020568 (8.4%)" "DNA topoisomerase, type IIA, subunit B, domain 2 (8.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (8.4%) Ribosomal protein uS5 domain 2-type superfamily (8.4%)" HAVTEASPMVK Pseudomonadati Bacteria Pseudomonadati "GO:0006412 (24.8%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (24.6%) GO:0005840 (0.6%) GO:1990904 (0.1%)" "GO:0003735 (24.8%) GO:0070181 (24.6%) GO:0019843 (0.2%)" "translation (24.8%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.6%) ribosome (0.6%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.8%) small ribosomal subunit rRNA binding (24.6%) rRNA binding (0.2%)" "IPR014717 (20.1%) IPR035980 (20.1%) IPR000529 (20%)" "Translation elongation factor EF1B/small ribosomal subunit protein bS6 (20.1%) Small ribosomal subunit protein bS6 superfamily (20.1%) Small ribosomal subunit protein bS6 (20%)" AVIEALSNSFTWLQEKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20.1%) IPR018189 (20.1%) IPR035476 (20.1%)" "Phosphoglucose isomerase (PGI) (20.1%) Phosphoglucose isomerase, conserved site (20.1%) Phosphoglucose isomerase, SIS domain 1 (20.1%)" EVQYYLDEIEKR root "2.7.1.162 (37.5%) 3.1.6.- (37.5%) 2.7.1.- (25%)" "N-acetylhexosamine 1-kinase (37.5%) Sulfuric ester hydrolases (37.5%) Phosphotransferases with an alcohol group as acceptor (25%)" "GO:0016740 (85.7%) GO:0016301 (8.6%) GO:0016787 (5.7%)" "transferase activity (85.7%) kinase activity (8.6%) hydrolase activity (5.7%)" "IPR002575 (33.3%) IPR011009 (33.3%) IPR050249 (33.3%)" "Aminoglycoside phosphotransferase (33.3%) Protein kinase-like domain superfamily (33.3%) Pseudomonas-type Homoserine Kinase (33.3%)" NFYNGTSGTELK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.95 (50%) 1.1.1.290 (25%) 1.1.1.81 (25%)" "phosphoglycerate dehydrogenase (50%) 4-phosphoerythronate dehydrogenase (25%) hydroxypyruvate reductase (25%)" "GO:0051287 (48.8%) GO:0016616 (39%) GO:0004617 (4.9%)" "NAD binding (48.8%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (39%) phosphoglycerate dehydrogenase activity (4.9%)" "IPR006139 (29.9%) IPR006140 (29.9%) IPR036291 (29.9%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (29.9%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (29.9%) NAD(P)-binding domain superfamily (29.9%)" ADVQGEFEEHAEEERHHAQLIADR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006879 (20%) GO:0005829 (20%) "GO:0004322 (20%) GO:0008199 (20%) GO:0020037 (20%)" intracellular iron ion homeostasis (20%) cytosol (20%) "ferroxidase activity (20%) ferric iron binding (20%) heme binding (20%)" "IPR008331 (16.7%) IPR009040 (16.7%) IPR009078 (16.7%)" "Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%) Ferritin-like superfamily (16.7%)" KSVHEPLQTGIK root "7.1.2.2 (98.2%) 3.6.3.14 (1.8%)" "H(+)-transporting two-sector ATPase (98.2%) Transferred entry: 7.1.2.2 (1.8%)" "GO:0032784 (0.1%) GO:0015986 (0%) GO:0009231 (0%)" "GO:0045259 (19.8%) GO:0005886 (15.5%) GO:0005739 (0.8%)" "GO:0005524 (19.8%) GO:0046933 (19.8%) GO:0043531 (19.8%)" "regulation of DNA-templated transcription elongation (0.1%) proton motive force-driven ATP synthesis (0%) riboflavin biosynthetic process (0%)" "proton-transporting ATP synthase complex (19.8%) plasma membrane (15.5%) mitochondrion (0.8%)" "ATP binding (19.8%) proton-transporting ATP synthase activity, rotational mechanism (19.8%) ADP binding (19.8%)" "IPR005294 (11.2%) IPR027417 (11.2%) IPR000194 (11.2%)" "ATP synthase, F1 complex, alpha subunit (11.2%) P-loop containing nucleoside triphosphate hydrolase (11.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11.2%)" IQSIHFDATEQLQAFIQKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR003489 (50%) IPR036567 (50%)" "Ribosome hibernation promoting factor/RaiA (50%) Ribosome hibernation promotion factor-like (50%)" AFRDVELEKQVLEEAYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" VDPFQVLDQNGVGQLVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.7.9.1 (99.4%) 2.7.-.- (0.6%)" "pyruvate, phosphate dikinase (99.4%) Transferring phosphorus-containing groups (0.6%)" "GO:0050242 (25.3%) GO:0016301 (25.2%) GO:0046872 (24.7%)" "pyruvate, phosphate dikinase activity (25.3%) kinase activity (25.2%) metal ion binding (24.7%)" "IPR000121 (10.1%) IPR010121 (10.1%) IPR015813 (10.1%)" "PEP-utilising enzyme, C-terminal (10.1%) Pyruvate, phosphate dikinase (10.1%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (10.1%)" SVDPYLDKEALR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0015031 (19.7%) GO:0055085 (19.7%) GO:0015891 (10.6%)" "GO:0098797 (19.7%) GO:0030288 (10.6%)" GO:0031992 (19.7%) "protein transport (19.7%) transmembrane transport (19.7%) siderophore transport (10.6%)" "plasma membrane protein complex (19.7%) outer membrane-bounded periplasmic space (10.6%)" energy transducer activity (19.7%) "IPR006260 (28%) IPR037682 (28%) IPR051045 (28%)" "TonB/TolA, C-terminal (28%) TonB, C-terminal (28%) TonB-dependent transporter energy transducer (28%)" VLPGIAAVKGEAYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" SQFQYSSTMQIPVLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (16.7%) "GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "ribosome (16.7%) ribonucleoprotein complex (16.7%)" "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR002132 (20%) IPR020930 (20%) IPR022803 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5, bacteria (20%) Large ribosomal subunit protein uL5 domain superfamily (20%)" IMVELPGIKEPERVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006605 (18.9%) GO:0043952 (18.9%) GO:0065002 (18.9%)" GO:0005886 (20.8%) GO:0015450 (20.4%) "protein targeting (18.9%) protein transport by the Sec complex (18.9%) intracellular protein transmembrane transport (18.9%)" plasma membrane (20.8%) protein-transporting ATPase activity (20.4%) "IPR022813 (11.3%) IPR048631 (11.3%) IPR054384 (11.2%)" "Protein-export membrane protein SecD/SecF, archaeal and bacterial (11.3%) Protein translocase subunit SecDF, P1 domain, N-terminal (11.3%) SecDF, P1 head subdomain (11.2%)" SIGFDGLLNFYAGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.2.3 (100%) uridine phosphorylase (100%) GO:0006152 (32.5%) GO:0005829 (32.5%) "GO:0004731 (32.5%) GO:0004850 (2.5%)" purine nucleoside catabolic process (32.5%) cytosol (32.5%) "purine-nucleoside phosphorylase activity (32.5%) uridine phosphorylase activity (2.5%)" "IPR000845 (50.1%) IPR035994 (49.9%)" "Nucleoside phosphorylase domain (50.1%) Nucleoside phosphorylase superfamily (49.9%)" RAYYHETVEILEEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20.3%) IPR013785 (20.3%) IPR035990 (20.3%)" "Triosephosphate isomerase (20.3%) Aldolase-type TIM barrel (20.3%) Triosephosphate isomerase superfamily (20.3%)" AGTPLSDGAITPADILAIKGPTAVQEYIVNEVQDVYR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) GO:0000428 (17.2%) "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (15%)" DNA-templated transcription (17%) DNA-directed RNA polymerase complex (17.2%) "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (15%)" "IPR007081 (9.3%) IPR045867 (9.3%) IPR000722 (9%)" "RNA polymerase Rpb1, domain 5 (9.3%) DNA-directed RNA polymerase, subunit beta-prime (9.3%) RNA polymerase, alpha subunit (9%)" ASLPIAGTAVYMTSYPR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (17.3%) GO:0006164 (2.7%)" GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" "'de novo' IMP biosynthetic process (17.3%) purine nucleotide biosynthetic process (2.7%)" cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010918 (11.4%) IPR041609 (11.4%) IPR055181 (11.4%)" "PurM-like, C-terminal domain (11.4%) Phosphoribosylformylglycinamidine synthase, linker domain (11.4%) FGAR-AT, PurM N-terminal-like domain (11.4%)" MEYRNENVPMGSSIVSSEFETVQTDREK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0005507 (50%) cytoplasm (50%) copper ion binding (50%) "IPR005627 (50%) IPR036822 (50%)" "CutC-like (50%) CutC-like domain superfamily (50%)" RKVLNIFPSIDTGVCAASVR Bacteria Bacteria "1.11.1.24 (91.5%) 1.11.1.- (7.7%) 1.11.1.15 (0.4%)" "thioredoxin-dependent peroxiredoxin (91.5%) Peroxidases (7.7%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (0.4%)" GO:0034599 (48.9%) "GO:0005829 (0.1%) GO:0042597 (0.1%)" "GO:0008379 (49.7%) GO:0004601 (1.1%) GO:0004130 (0.1%)" cellular response to oxidative stress (48.9%) "cytosol (0.1%) periplasmic space (0.1%)" "thioredoxin peroxidase activity (49.7%) peroxidase activity (1.1%) cytochrome-c peroxidase activity (0.1%)" "IPR013740 (16.7%) IPR036249 (16.7%) IPR050455 (16.7%)" "Redoxin (16.7%) Thioredoxin-like superfamily (16.7%) Thiol Peroxidase Tpx Subfamily (16.7%)" TVLQHAISK root 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (20.9%) GO:0046034 (4.4%) GO:1902600 (0.1%)" "GO:0005524 (25.3%) GO:0046961 (25.3%) GO:0046933 (20.9%)" "proton motive force-driven plasma membrane ATP synthesis (20.9%) ATP metabolic process (4.4%) proton transmembrane transport (0.1%)" "ATP binding (25.3%) proton-transporting ATPase activity, rotational mechanism (25.3%) proton-transporting ATP synthase activity, rotational mechanism (20.9%)" "IPR000194 (13.3%) IPR022878 (13.3%) IPR027417 (13.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (13.3%) V-type ATP synthase catalytic alpha chain (13.3%) P-loop containing nucleoside triphosphate hydrolase (13.3%)" ILPYQKEDFK root 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0016301 (25.2%) GO:0046872 (25.2%) GO:0050242 (25.2%)" "kinase activity (25.2%) metal ion binding (25.2%) pyruvate, phosphate dikinase activity (25.2%)" "IPR000121 (10.1%) IPR008279 (10.1%) IPR010121 (10.1%)" "PEP-utilising enzyme, C-terminal (10.1%) PEP-utilising enzyme, mobile domain (10.1%) Pyruvate, phosphate dikinase (10.1%)" FKAEVYILKK root "3.6.5.3 (99.8%) 2.7.7.6 (0.2%)" "protein-synthesizing GTPase (99.8%) DNA-directed RNA polymerase (0.2%)" "GO:0032790 (0%) GO:0070125 (0%) GO:0006351 (0%)" "GO:0005829 (15.6%) GO:0032045 (11%) GO:0005737 (0.2%)" "GO:0003746 (16%) GO:0005525 (16%) GO:0003924 (15.4%)" "ribosome disassembly (0%) mitochondrial translational elongation (0%) DNA-templated transcription (0%)" "cytosol (15.6%) guanyl-nucleotide exchange factor complex (11%) cytoplasm (0.2%)" "translation elongation factor activity (16%) GTP binding (16%) GTPase activity (15.4%)" "IPR004160 (8.5%) IPR009001 (8.5%) IPR050055 (8.5%)" "Translation elongation factor EFTu/EF1A, C-terminal (8.5%) Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (8.5%) Elongation factor Tu GTPase (8.5%)" AQFEEKWNDLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005737 (18.1%) "GO:0005524 (19%) GO:0016887 (19%) GO:0051082 (19%)" cytoplasm (18.1%) "ATP binding (19%) ATP hydrolysis activity (19%) unfolded protein binding (19%)" "IPR001404 (16.9%) IPR019805 (16.9%) IPR020568 (16.9%)" "Heat shock protein Hsp90 family (16.9%) Heat shock protein Hsp90, conserved site (16.9%) Ribosomal protein uS5 domain 2-type superfamily (16.9%)" LIAELNDFLAANAVEFANIKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" YLLVVNAANIEKDWNWCVSHNTVGAELENASDR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (15.2%) GO:0032259 (11.4%)" "GO:0005829 (15.2%) GO:0005960 (15.2%)" "GO:0004047 (15.2%) GO:0008483 (15.2%) GO:0008168 (11.4%)" "glycine decarboxylation via glycine cleavage system (15.2%) methylation (11.4%)" "cytosol (15.2%) glycine cleavage complex (15.2%)" "aminomethyltransferase activity (15.2%) transaminase activity (15.2%) methyltransferase activity (11.4%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" VGLVSVHLYRPFSAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "1.2.7.1 (73.3%) 1.2.7.- (20%) 1.2.1.51 (6.7%)" "pyruvate synthase (73.3%) With an iron-sulfur protein as acceptor (20%) pyruvate dehydrogenase (NADP(+)) (6.7%)" "GO:0006979 (14.6%) GO:0022900 (14.6%) GO:0044281 (12.3%)" "GO:0005506 (14.6%) GO:0051539 (14.6%) GO:0030976 (14.2%)" "response to oxidative stress (14.6%) electron transport chain (14.6%) small molecule metabolic process (12.3%)" "iron ion binding (14.6%) 4 iron, 4 sulfur cluster binding (14.6%) thiamine pyrophosphate binding (14.2%)" "IPR002869 (7.7%) IPR009014 (7.7%) IPR011895 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%) Pyruvate-flavodoxin oxidoreductase (7.7%)" LYSEDPGSASR Bacteroidota Bacteria Pseudomonadati Bacteroidota 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0003755 (100%) peptidyl-prolyl cis-trans isomerase activity (100%) "IPR000297 (21.4%) IPR027304 (21.4%) IPR046357 (21.4%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (21.4%) Trigger factor/SurA domain superfamily (21.4%) Peptidyl-prolyl cis-trans isomerase domain superfamily (21.4%)" FGTPDELKELIDTAHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) "GO:0005737 (20%) GO:0016020 (1%)" "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (19%)" glycogen biosynthetic process (20%) "cytoplasm (20%) membrane (1%)" "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (19%)" "IPR004193 (12.7%) IPR006047 (12.7%) IPR013783 (12.7%)" "Glycoside hydrolase, family 13, N-terminal (12.7%) Glycosyl hydrolase family 13, catalytic domain (12.7%) Immunoglobulin-like fold (12.7%)" ECTLETLEEMLEK root "GO:0006355 (0.1%) GO:0045892 (0%) GO:0006417 (0%)" "GO:0009295 (11%) GO:0005829 (11%) GO:0032993 (11%)" "GO:0046983 (11.2%) GO:0000976 (11%) GO:0001217 (11%)" "regulation of DNA-templated transcription (0.1%) negative regulation of DNA-templated transcription (0%) regulation of translation (0%)" "nucleoid (11%) cytosol (11%) protein-DNA complex (11%)" "protein dimerization activity (11.2%) transcription cis-regulatory region binding (11%) DNA-binding transcription repressor activity (11%)" "IPR027454 (20.3%) IPR054180 (20.3%) IPR001801 (19.9%)" "Histone-like protein H-NS, N-terminal (20.3%) DNA-binding protein H-NS-like, N-terminal domain (20.3%) DNA-binding protein H-NS-like (19.9%)" IIHPMGEIDAMEFLINK root "3.6.4.- (99.9%) 3.6.1.15 (0.1%)" "Acting on ATP; involved in cellular and subcellular movement (99.9%) nucleoside-triphosphate phosphatase (0.1%)" GO:0006353 (14.4%) "GO:0005829 (13.8%) GO:0016020 (0%)" "GO:0003723 (14.4%) GO:0005524 (14.4%) GO:0008186 (14.4%)" DNA-templated transcription termination (14.4%) "cytosol (13.8%) membrane (0%)" "RNA binding (14.4%) ATP binding (14.4%) ATP-dependent activity, acting on RNA (14.4%)" "IPR027417 (10.3%) IPR004665 (10.3%) IPR000194 (10.1%)" "P-loop containing nucleoside triphosphate hydrolase (10.3%) Transcription termination factor Rho (10.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%)" RMEDQGQFECLENELHGLTDKAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis NLGDIMNLMK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.2.10 (81.6%) 5.4.2.2 (12.6%) 5.4.2.8 (5.8%)" "phosphoglucosamine mutase (81.6%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (12.6%) phosphomannomutase (5.8%)" "GO:0005975 (14.1%) GO:0006048 (14%) GO:0009252 (14%)" GO:0005829 (14%) "GO:0004615 (14%) GO:0008966 (14%) GO:0000287 (13.9%)" "carbohydrate metabolic process (14.1%) UDP-N-acetylglucosamine biosynthetic process (14%) peptidoglycan biosynthetic process (14%)" cytosol (14%) "phosphomannomutase activity (14%) phosphoglucosamine mutase activity (14%) magnesium ion binding (13.9%)" "IPR005845 (10.2%) IPR016055 (10.2%) IPR050060 (10.1%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (10.2%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (10.2%) Phosphoglucosamine mutase (10.1%)" AYDGTLNKVNDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.8%) "GO:0022627 (24.1%) GO:0005840 (0.8%) GO:1990904 (0.8%)" "GO:0003729 (24.8%) GO:0003735 (24.8%)" translation (24.8%) "cytosolic small ribosomal subunit (24.1%) ribosome (0.8%) ribonucleoprotein complex (0.8%)" "mRNA binding (24.8%) structural constituent of ribosome (24.8%)" "IPR003029 (24.9%) IPR012340 (24.9%) IPR035104 (24.9%)" "S1 domain (24.9%) Nucleic acid-binding, OB-fold (24.9%) Ribosomal protein S1-like (24.9%)" ECDIVSLHCPLTESTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.1.1.29 (75%) 1.1.1.290 (25%)" "glycerate dehydrogenase (75%) 4-phosphoerythronate dehydrogenase (25%)" "GO:0051287 (50%) GO:0016616 (38.9%) GO:0008465 (8.3%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (38.9%) hydroxypyruvate reductase (NADH) activity (8.3%)" "IPR006139 (20%) IPR006140 (20%) IPR029753 (20%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (20%)" GGHSGLEINQGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25.1%) GO:0005829 (24.7%) "GO:0046872 (25.1%) GO:0070573 (25.1%)" proteolysis (25.1%) cytosol (24.7%) "metal ion binding (25.1%) metallodipeptidase activity (25.1%)" "IPR001160 (30.1%) IPR002933 (30.1%) IPR011650 (30.1%)" "Peptidase M20C, Xaa-His dipeptidase (30.1%) Peptidase M20 (30.1%) Peptidase M20, dimerisation domain (30.1%)" MVVNDIQGAGTLK Candidatus Copromonas faecavium (nom. illeg.) Bacteria Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Candidatus Copromonas (nom. illeg.) Candidatus Copromonas faecavium (nom. illeg.) GO:0006260 (50%) GO:0005524 (50%) DNA replication (50%) ATP binding (50%) "IPR002611 (33.3%) IPR003593 (33.3%) IPR027417 (33.3%)" "IstB-like ATP-binding domain (33.3%) AAA+ ATPase domain (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" LFAGNATPELAQR root 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (10.9%)" "GO:0005737 (11.1%) GO:0002189 (11.1%) GO:0005829 (0%)" "GO:0004749 (11.1%) GO:0016301 (11.1%) GO:0000287 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (10.9%)" "cytoplasm (11.1%) ribose phosphate diphosphokinase complex (11.1%) cytosol (0%)" "ribose phosphate diphosphokinase activity (11.1%) kinase activity (11.1%) magnesium ion binding (11.1%)" "IPR029057 (16.9%) IPR029099 (16.9%) IPR005946 (16.9%)" "Phosphoribosyltransferase-like (16.9%) Ribose-phosphate pyrophosphokinase, N-terminal domain (16.9%) Ribose-phosphate pyrophosphokinase (16.9%)" IGEGDAEIVEVYTQGLGHLSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) "GO:0006633 (30%) GO:0044550 (30%)" "GO:0004315 (30%) GO:0033818 (10%)" "fatty acid biosynthetic process (30%) secondary metabolite biosynthetic process (30%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (30%) beta-ketoacyl-acyl-carrier-protein synthase III activity (10%)" "IPR013747 (33.3%) IPR013751 (33.3%) IPR016039 (33.3%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (33.3%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (33.3%) Thiolase-like (33.3%)" AFTKPFNDAGIQTHMLDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.1.3.1 (50%) 6.4.1.1 (50%)" "methylmalonyl-CoA carboxytransferase (50%) pyruvate carboxylase (50%)" GO:0006094 (5.4%) GO:0005737 (5.4%) "GO:0003824 (70.3%) GO:0047154 (8.1%) GO:0004736 (5.4%)" gluconeogenesis (5.4%) cytoplasm (5.4%) "catalytic activity (70.3%) methylmalonyl-CoA carboxytransferase activity (8.1%) pyruvate carboxylase activity (5.4%)" "IPR000891 (24.4%) IPR003379 (24.4%) IPR013785 (24.4%)" "Pyruvate carboxyltransferase (24.4%) Carboxylase, conserved domain (24.4%) Aldolase-type TIM barrel (24.4%)" HGVEGIIFSSSCTVYGQPDVLPVTEEAPIKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR005886 (33.3%) IPR036291 (33.3%) IPR001509 (28.6%)" "UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD-dependent epimerase/dehydratase (28.6%)" LFNDCSFYNEVATTPEQFPR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "1.2.2.2 (66.7%) 1.2.5.1 (33.3%)" "Deleted entry (66.7%) pyruvate dehydrogenase (quinone) (33.3%)" GO:0019752 (25%) "GO:0000287 (25%) GO:0030976 (25%) GO:0003824 (20.6%)" carboxylic acid metabolic process (25%) "magnesium ion binding (25%) thiamine pyrophosphate binding (25%) catalytic activity (20.6%)" "IPR000399 (11.1%) IPR011766 (11.1%) IPR012000 (11.1%)" "TPP-binding enzyme, conserved site (11.1%) Thiamine pyrophosphate enzyme, TPP-binding (11.1%) Thiamine pyrophosphate enzyme, central domain (11.1%)" VGIGHGNLAAMLLR Bacteria Bacteria IPR025964 (100%) GGGtGRT protein (100%) SYGGSHIVMSCK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.4.1.3 (52.9%) 6.-.-.- (47.1%)" "propionyl-CoA carboxylase (52.9%) Ligases (47.1%)" "GO:0015977 (22.2%) GO:0006633 (0.1%)" GO:0009317 (22.2%) "GO:0004658 (24.5%) GO:0003989 (22.2%) GO:0016740 (8.2%)" "carbon fixation (22.2%) fatty acid biosynthetic process (0.1%)" acetyl-CoA carboxylase complex (22.2%) "propionyl-CoA carboxylase activity (24.5%) acetyl-CoA carboxylase activity (22.2%) transferase activity (8.2%)" "IPR011763 (20%) IPR029045 (20%) IPR034733 (20%)" "Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20%)" SATGQPITTYTSQYR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (33.3%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (33.3%)" "IPR003741 (12.7%) IPR004452 (12.7%) IPR009051 (12.7%)" "LUD domain (12.7%) L-lactate oxidation iron-sulfur protein LutB/LldF (12.7%) Alpha-helical ferredoxin (12.7%)" IGEVHDGAATMDWMEQEQERGITITSAATTTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0032790 (20.5%) GO:0006412 (0.2%)" GO:0005737 (18%) "GO:0003746 (20.5%) GO:0003924 (20.5%) GO:0005525 (20.5%)" "ribosome disassembly (20.5%) translation (0.2%)" cytoplasm (18%) "translation elongation factor activity (20.5%) GTPase activity (20.5%) GTP binding (20.5%)" "IPR000795 (6.5%) IPR027417 (6.5%) IPR031157 (6.5%)" "Translational (tr)-type GTP-binding domain (6.5%) P-loop containing nucleoside triphosphate hydrolase (6.5%) Tr-type G domain, conserved site (6.5%)" ASIRDNKGNEIFVHQGQTVLIPADTEVITISPAPGAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (17.4%) IPR014628 (17.4%) IPR014710 (17.4%)" "RmlC-like cupin domain superfamily (17.4%) Mannose-6-phosphate isomerase, Firmicutes type, short form (17.4%) RmlC-like jelly roll fold (17.4%)" GLLEQNLLPTMTPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis AVVHTVGPVWR root "3.1.1.106 (96.7%) 3.1.1.- (1.7%) 3.5.1.- (1.7%)" "O-acetyl-ADP-ribose deacetylase (96.7%) Carboxylic ester hydrolases (1.7%) In linear amides (1.7%)" "GO:0042278 (24%) GO:0007155 (0.2%) GO:0032049 (0.2%)" GO:0005886 (0.2%) "GO:0061463 (24.4%) GO:0001883 (24%) GO:0008428 (23.8%)" "purine nucleoside metabolic process (24%) cell adhesion (0.2%) cardiolipin biosynthetic process (0.2%)" plasma membrane (0.2%) "O-acetyl-ADP-ribose deacetylase activity (24.4%) purine nucleoside binding (24%) ribonuclease inhibitor activity (23.8%)" "IPR002589 (32.2%) IPR043472 (32.2%) IPR024900 (31.4%)" "Macro domain (32.2%) Macro domain-like (32.2%) O-acetyl-ADP-ribose deacetylase (31.4%)" QRPLGDGVVTGYGMIGQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (24%) GO:0009317 (24%) "GO:0003989 (24%) GO:0004658 (24%) GO:0016740 (4%)" carbon fixation (24%) acetyl-CoA carboxylase complex (24%) "acetyl-CoA carboxylase activity (24%) propionyl-CoA carboxylase activity (24%) transferase activity (4%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" TQLIDVIAEKAELSK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0030261 (11.6%) GO:0006270 (10.5%) GO:0006351 (10.5%)" "GO:0005829 (11.6%) GO:1990103 (10.5%) GO:1990178 (10.5%)" "GO:0003677 (12.1%) GO:0030527 (11.6%) GO:0042802 (10.5%)" "chromosome condensation (11.6%) DNA replication initiation (10.5%) DNA-templated transcription (10.5%)" "cytosol (11.6%) DnaA-HU complex (10.5%) HU-DNA complex (10.5%)" "DNA binding (12.1%) structural constituent of chromatin (11.6%) identical protein binding (10.5%)" "IPR000119 (33.6%) IPR010992 (33.6%) IPR020816 (32.8%)" "Histone-like DNA-binding protein (33.6%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.6%) Histone-like DNA-binding protein, conserved site (32.8%)" ITPAATSNVDVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.16 (100%) cysteine--tRNA ligase (100%) GO:0006423 (20%) GO:0005829 (20%) "GO:0004817 (20%) GO:0005524 (20%) GO:0008270 (20%)" cysteinyl-tRNA aminoacylation (20%) cytosol (20%) "cysteine-tRNA ligase activity (20%) ATP binding (20%) zinc ion binding (20%)" "IPR009080 (14.3%) IPR014729 (14.3%) IPR015273 (14.3%)" "Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (14.3%) Rossmann-like alpha/beta/alpha sandwich fold (14.3%) Cysteinyl-tRNA synthetase, class Ia, DALR (14.3%)" ILLMHTPTVLTETVADTVMALVLSTAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.1.1.79 (57.1%) 1.1.1.81 (42.9%)" "glyoxylate reductase (NADP(+)) (57.1%) hydroxypyruvate reductase (42.9%)" "GO:0005829 (18.8%) GO:0005886 (18.8%)" "GO:0030267 (18.8%) GO:0051287 (18.8%) GO:0016618 (12.5%)" "cytosol (18.8%) plasma membrane (18.8%)" "glyoxylate reductase (NADPH) activity (18.8%) NAD binding (18.8%) hydroxypyruvate reductase [NAD(P)H] activity (12.5%)" "IPR006139 (16.7%) IPR006140 (16.7%) IPR023756 (16.7%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (16.7%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (16.7%) Glyoxylate/hydroxypyruvate reductase B (16.7%)" QLPAPNMLMMDR root "4.2.1.59 (51.3%) 5.3.3.14 (48.4%) 4.2.1.60 (0.2%)" "3-hydroxyacyl-[acyl-carrier-protein] dehydratase (51.3%) trans-2-decenoyl-[acyl-carrier-protein] isomerase (48.4%) Transferred entry: 4.2.1.59 (0.2%)" "GO:0006636 (24.2%) GO:0006633 (0.8%)" "GO:0005737 (24.5%) GO:0005829 (0%)" "GO:0019171 (25%) GO:0034017 (25%) GO:0016829 (0.2%)" "unsaturated fatty acid biosynthetic process (24.2%) fatty acid biosynthetic process (0.8%)" "cytoplasm (24.5%) cytosol (0%)" "(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (25%) trans-2-decenoyl-acyl-carrier-protein isomerase activity (25%) lyase activity (0.2%)" "IPR029069 (33.7%) IPR013114 (33.4%) IPR010083 (32.9%)" "HotDog domain superfamily (33.7%) Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ (33.4%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA (32.9%)" AVSKPEQADAFFVVVPTPFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.336 (90%) 1.1.1.136 (10%)" "UDP-N-acetyl-D-mannosamine dehydrogenase (90%) UDP-N-acetylglucosamine 6-dehydrogenase (10%)" GO:0000271 (24.7%) "GO:0016628 (24.7%) GO:0051287 (24.7%) GO:0016616 (18.5%)" polysaccharide biosynthetic process (24.7%) "oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (24.7%) NAD binding (24.7%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (18.5%)" "IPR001732 (12.5%) IPR008927 (12.5%) IPR014026 (12.5%)" "UDP-glucose/GDP-mannose dehydrogenase, N-terminal (12.5%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (12.5%) UDP-glucose/GDP-mannose dehydrogenase, dimerisation (12.5%)" VDYQINNYIQAMGTR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0003755 (71.4%) GO:0016853 (14.3%) GO:0046872 (14.3%)" "peptidyl-prolyl cis-trans isomerase activity (71.4%) isomerase activity (14.3%) metal ion binding (14.3%)" "IPR000297 (25%) IPR027304 (25%) IPR046357 (25%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (25%) Trigger factor/SurA domain superfamily (25%) Peptidyl-prolyl cis-trans isomerase domain superfamily (25%)" SGDFPTVVSPNPENAEALSMAIDLAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.2 (66.7%) 5.4.2.- (33.3%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (66.7%) Phosphotransferases (phosphomutases) (33.3%)" "GO:0005975 (23.4%) GO:0006166 (23.4%)" "GO:0000287 (23.4%) GO:0008973 (23.4%) GO:0004614 (6.4%)" "carbohydrate metabolic process (23.4%) purine ribonucleoside salvage (23.4%)" "magnesium ion binding (23.4%) phosphopentomutase activity (23.4%) phosphoglucomutase activity (6.4%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" ALNPMNPVAR Bacteria Bacteria "1.2.7.1 (76%) 1.2.7.- (24%)" "pyruvate synthase (76%) With an iron-sulfur protein as acceptor (24%)" "GO:0006979 (14.9%) GO:0022900 (14.9%) GO:0044281 (10.8%)" "GO:0005506 (14.9%) GO:0051539 (14.9%) GO:0030976 (14.5%)" "response to oxidative stress (14.9%) electron transport chain (14.9%) small molecule metabolic process (10.8%)" "iron ion binding (14.9%) 4 iron, 4 sulfur cluster binding (14.9%) thiamine pyrophosphate binding (14.5%)" "IPR002869 (7.8%) IPR002880 (7.8%) IPR009014 (7.8%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.8%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.8%)" ILEVTNSDLAVIGAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (33.3%) "GO:0008448 (33.3%) GO:0046872 (33.3%)" N-acetylglucosamine catabolic process (33.3%) "N-acetylglucosamine-6-phosphate deacetylase activity (33.3%) metal ion binding (33.3%)" "IPR003764 (25%) IPR006680 (25%) IPR011059 (25%)" "N-acetylglucosamine-6-phosphate deacetylase (25%) Amidohydrolase-related (25%) Metal-dependent hydrolase, composite domain superfamily (25%)" SNEVFENIEPDLIDR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" ASRHEDFPYQEILLTR Bacteria Bacteria "GO:0006351 (0.1%) GO:0006355 (0.1%) GO:0006950 (0.1%)" GO:0005829 (0.1%) "GO:0003700 (50%) GO:0003677 (49.3%)" "DNA-templated transcription (0.1%) regulation of DNA-templated transcription (0.1%) response to stress (0.1%)" cytosol (0.1%) "DNA-binding transcription factor activity (50%) DNA binding (49.3%)" "IPR000835 (25.1%) IPR036388 (25.1%) IPR036390 (25.1%)" "MarR-type HTH domain (25.1%) Winged helix-like DNA-binding domain superfamily (25.1%) Winged helix DNA-binding domain superfamily (25.1%)" STNDLELKDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (16.9%) GO:0042254 (16.3%)" "GO:0015935 (16.9%) GO:0005737 (16.3%)" "GO:0003735 (16.9%) GO:0019843 (16.9%)" "translation (16.9%) ribosome biogenesis (16.3%)" "small ribosomal subunit (16.9%) cytoplasm (16.3%)" "structural constituent of ribosome (16.9%) rRNA binding (16.9%)" "IPR000851 (14.3%) IPR005324 (14.3%) IPR005712 (14.3%)" "Small ribosomal subunit protein uS5 (14.3%) Small ribosomal subunit protein uS5, C-terminal (14.3%) Small ribosomal subunit protein uS5, bacteria (14.3%)" TAEDYLGQEVTEAVITVPAYFSDAQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005737 (22.8%) GO:0070013 (3%)" "GO:0005524 (24.8%) GO:0051082 (24.8%) GO:0140662 (24.8%)" "cytoplasm (22.8%) intracellular organelle lumen (3%)" "ATP binding (24.8%) unfolded protein binding (24.8%) ATP-dependent protein folding chaperone (24.8%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" IYNGLNQEIFTISK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" MDKLASEYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.13.3 (100%) histidine kinase (100%) GO:0000155 (100%) phosphorelay sensor kinase activity (100%) "IPR001789 (14.5%) IPR003594 (14.5%) IPR004358 (14.5%)" "Signal transduction response regulator, receiver domain (14.5%) Histidine kinase/HSP90-like ATPase domain (14.5%) Signal transduction histidine kinase-related protein, C-terminal (14.5%)" VTEEQGAVKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae MVTFHTNHGDIVIK root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (33.1%) GO:0009245 (0.1%) GO:0061077 (0.1%)" "GO:0005737 (32.4%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0003755 (33.5%) GO:0016853 (0.6%) GO:0008758 (0.1%)" "protein folding (33.1%) lipid A biosynthetic process (0.1%) obsolete chaperone-mediated protein folding (0.1%)" "cytoplasm (32.4%) cytosol (0.1%) plasma membrane (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (33.5%) isomerase activity (0.6%) UDP-2,3-diacylglucosamine hydrolase activity (0.1%)" "IPR029000 (20.2%) IPR002130 (20.2%) IPR020892 (20%)" "Cyclophilin-like domain superfamily (20.2%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (20.2%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (20%)" AAYYDGLESYPSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0009328 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) phenylalanine-tRNA ligase complex (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002547 (7.7%) IPR004532 (7.7%) IPR005121 (7.7%)" "tRNA-binding domain (7.7%) Phenylalanine-tRNA ligase, class IIc, beta subunit, bacterial type (7.7%) Ferrodoxin-fold anticodon-binding domain (7.7%)" FGLADGVSYVSTGGGALLEAIEGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" SAVVYTNYVEAEIEKHQGYIGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.3.8.1 (100%) short-chain acyl-CoA dehydrogenase (100%) "GO:0050660 (50%) GO:0003995 (41.7%) GO:0016937 (8.3%)" "flavin adenine dinucleotide binding (50%) acyl-CoA dehydrogenase activity (41.7%) short-chain fatty acyl-CoA dehydrogenase activity (8.3%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009075 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.1%)" KSGVITGLPDAYGR root 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (31%) GO:0005975 (0.1%) GO:0044814 (0%)" "GO:0005829 (32.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0008861 (32.1%) GO:0016829 (4.2%) GO:0016746 (0.4%)" "glucose metabolic process (31%) carbohydrate metabolic process (0.1%) pyruvate fermentation via PFL (0%)" "cytosol (32.1%) cytoplasm (0%) plasma membrane (0%)" "formate C-acetyltransferase activity (32.1%) lyase activity (4.2%) acyltransferase activity (0.4%)" "IPR004184 (20.4%) IPR050244 (20.4%) IPR005949 (19.7%)" "Pyruvate formate lyase domain (20.4%) Autonomous Glycyl Radical Cofactor (20.4%) Formate acetyltransferase (19.7%)" TNKQDRPTENIVINSVEIL Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR002130 (25.7%) IPR020892 (25.7%) IPR044666 (25.7%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (25.7%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (25.7%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like (25.7%)" SGSSIIPSSAITTNFVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR025150 (47.8%) IPR053850 (47.8%) IPR017853 (4.3%)" "Glycoside hydrolase 123, catalytic domain (47.8%) Glycoside hydrolase 123, N-terminal domain (47.8%) Glycoside hydrolase superfamily (4.3%)" HGIEGIVFSSSCTVYGEPDELPVTENAPIKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR001509 (33.3%) IPR005886 (33.3%) IPR036291 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%)" DRNFQAILPIR root "5.6.2.2 (99.7%) 5.99.1.- (0.1%) 5.99.1.3 (0.1%)" "DNA topoisomerase (ATP-hydrolyzing) (99.7%) Other isomerases (0.1%) Transferred entry: 5.6.2.2 (0.1%)" "GO:0006265 (15.2%) GO:0006261 (8.5%) GO:0032259 (0.1%)" "GO:0005737 (9.7%) GO:0005694 (9.6%)" "GO:0003677 (15.2%) GO:0005524 (15.2%) GO:0034335 (11.3%)" "DNA topological change (15.2%) DNA-templated DNA replication (8.5%) methylation (0.1%)" "cytoplasm (9.7%) chromosome (9.6%)" "DNA binding (15.2%) ATP binding (15.2%) DNA negative supercoiling activity (11.3%)" "IPR006171 (8%) IPR013759 (8%) IPR013760 (8%)" "TOPRIM domain (8%) DNA topoisomerase, type IIA, subunit B, C-terminal (8%) DNA topoisomerase, type IIA-like domain superfamily (8%)" SEIQLNTIEEAIEDFREGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.5.4.25 (50%) 4.1.99.12 (50%)" "GTP cyclohydrolase II (50%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (50%)" GO:0009231 (12.5%) GO:0005829 (12.5%) "GO:0000287 (12.5%) GO:0003935 (12.5%) GO:0005525 (12.5%)" riboflavin biosynthetic process (12.5%) cytosol (12.5%) "magnesium ion binding (12.5%) GTP cyclohydrolase II activity (12.5%) GTP binding (12.5%)" "IPR000422 (16.7%) IPR000926 (16.7%) IPR016299 (16.7%)" "3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB (16.7%) GTP cyclohydrolase II, RibA (16.7%) Riboflavin biosynthesis protein RibBA (16.7%)" MRHPLVMGNWK root 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0019563 (16.6%)" "GO:0005829 (16.6%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0004807 (16.8%) GO:0016853 (0.2%) GO:0042802 (0%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) glycerol catabolic process (16.6%)" "cytosol (16.6%) cytoplasm (0%) membrane (0%)" "triose-phosphate isomerase activity (16.8%) isomerase activity (0.2%) identical protein binding (0%)" "IPR000652 (20.3%) IPR013785 (20.3%) IPR035990 (20.3%)" "Triosephosphate isomerase (20.3%) Aldolase-type TIM barrel (20.3%) Triosephosphate isomerase superfamily (20.3%)" GTDTTIGVVEGMQFDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (19.3%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (11.9%) GO:1990220 (0.1%)" "GO:0005524 (19.3%) GO:0140662 (19.3%) GO:0016853 (17.8%)" "protein refolding (19.3%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (11.9%) GroEL-GroES complex (0.1%)" "ATP binding (19.3%) ATP-dependent protein folding chaperone (19.3%) isomerase activity (17.8%)" "IPR001844 (17.7%) IPR002423 (17.7%) IPR027409 (17.6%)" "Chaperonin Cpn60/GroEL (17.7%) Chaperonin Cpn60/GroEL/TCP-1 family (17.7%) GroEL-like apical domain superfamily (17.6%)" YKVEDEPAAIAER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR038179 (100%) NigD-like, N-terminal domain superfamily (100%) VVETYFKDLDKRR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae VIGVGGGGNNAVNR root "GO:0000917 (12.3%) GO:0043093 (12.1%) GO:0051258 (12.1%)" "GO:0032153 (13%) GO:0005737 (12.4%) GO:0030428 (7.9%)" "GO:0003924 (13.1%) GO:0005525 (13.1%) GO:0042803 (0%)" "division septum assembly (12.3%) FtsZ-dependent cytokinesis (12.1%) protein polymerization (12.1%)" "cell division site (13%) cytoplasm (12.4%) cell septum (7.9%)" "GTPase activity (13.1%) GTP binding (13.1%) protein homodimerization activity (0%)" "IPR003008 (11.1%) IPR036525 (11.1%) IPR045061 (11.1%)" "Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, GTPase domain superfamily (11.1%) Tubulin-like protein FtsZ/CetZ (11.1%)" LQEGQNIALVSDAGTPLINDPGYHLVR root 2.1.1.198 (100%) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase (100%) "GO:0032259 (6.3%) GO:0006364 (4.9%)" GO:0005737 (43.4%) "GO:0070677 (38.8%) GO:0008168 (6.3%) GO:0042803 (0.3%)" "methylation (6.3%) rRNA processing (4.9%)" cytoplasm (43.4%) "rRNA (cytosine-2'-O-)-methyltransferase activity (38.8%) methyltransferase activity (6.3%) protein homodimerization activity (0.3%)" "IPR000878 (14.5%) IPR008189 (14.5%) IPR014777 (14.5%)" "Tetrapyrrole methylase (14.5%) rRNA small subunit methyltransferase I (14.5%) Tetrapyrrole methylase, subdomain 1 (14.5%)" CGICGEHGGEPSSVK root "2.7.9.1 (99.7%) 2.7.-.- (0.3%)" "pyruvate, phosphate dikinase (99.7%) Transferring phosphorus-containing groups (0.3%)" "GO:0050242 (25.7%) GO:0016301 (25.4%) GO:0046872 (24.5%)" "pyruvate, phosphate dikinase activity (25.7%) kinase activity (25.4%) metal ion binding (24.5%)" "IPR000121 (10.3%) IPR010121 (10.3%) IPR015813 (10.2%)" "PEP-utilising enzyme, C-terminal (10.3%) Pyruvate, phosphate dikinase (10.3%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (10.2%)" EVGFMFGMYKK Bacteria Bacteria "1.4.1.4 (77.8%) 1.4.1.3 (22.2%)" "glutamate dehydrogenase (NADP(+)) (77.8%) glutamate dehydrogenase [NAD(P)(+)] (22.2%)" GO:0006537 (25.7%) GO:0005829 (25.7%) "GO:0004354 (25.7%) GO:0000166 (22.6%) GO:0004352 (0.2%)" glutamate biosynthetic process (25.7%) cytosol (25.7%) "glutamate dehydrogenase (NADP+) activity (25.7%) nucleotide binding (22.6%) glutamate dehydrogenase (NAD+) activity (0.2%)" "IPR006097 (11.2%) IPR046346 (11.2%) IPR050724 (11.2%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.2%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.2%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.2%)" VGDGTQDNLSGCEK root 6.3.1.1 (100%) aspartate--ammonia ligase (100%) "GO:0070981 (23.2%) GO:0006529 (1.7%) GO:0006974 (0%)" GO:0005829 (24.9%) "GO:0004071 (24.9%) GO:0005524 (23.2%) GO:0000166 (1.7%)" "L-asparagine biosynthetic process (23.2%) obsolete asparagine biosynthetic process (1.7%) DNA damage response (0%)" cytosol (24.9%) "aspartate-ammonia ligase activity (24.9%) ATP binding (23.2%) nucleotide binding (1.7%)" "IPR004618 (33.5%) IPR045864 (33.4%) IPR006195 (33.1%)" "Aspartate--ammonia ligase (33.5%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (33.4%) Aminoacyl-tRNA synthetase, class II (33.1%)" SKIESFIQTDAAVNPGNSGGALVNTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.4.21.107 (71.4%) 3.4.21.- (28.6%)" "peptidase Do (71.4%) Serine endopeptidases (28.6%)" GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001478 (19.3%) IPR001940 (19.3%) IPR009003 (19.3%)" "PDZ domain (19.3%) Peptidase S1C (19.3%) Peptidase S1, PA clan (19.3%)" NQGEEIESLQKELDKLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005975 (50%) "GO:0003824 (21.4%) GO:0016787 (21.4%) GO:0016798 (7.1%)" carbohydrate metabolic process (50%) "catalytic activity (21.4%) hydrolase activity (21.4%) hydrolase activity, acting on glycosyl bonds (7.1%)" "IPR004300 (33.3%) IPR011330 (33.3%) IPR052046 (33.3%)" "Glycoside hydrolase family 57, N-terminal domain (33.3%) Glycoside hydrolase/deacetylase, beta/alpha-barrel (33.3%) Glycosyl hydrolase family 57 (33.3%)" GNAEIAAQFGKDIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (34.3%) "GO:0016615 (31.4%) GO:0016616 (31.4%) GO:0030060 (2.9%)" malate metabolic process (34.3%) "malate dehydrogenase activity (31.4%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (31.4%) L-malate dehydrogenase (NAD+) activity (2.9%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" SGAVDIVVVDSVAALTPK Bacteria Bacteria "GO:0006281 (12.7%) GO:0006310 (12.7%) GO:0009432 (12%)" "GO:0005829 (12.7%) GO:0005737 (0.1%)" "GO:0003697 (12.7%) GO:0005524 (12.7%) GO:0140664 (12.7%)" "DNA repair (12.7%) DNA recombination (12.7%) SOS response (12%)" "cytosol (12.7%) cytoplasm (0.1%)" "single-stranded DNA binding (12.7%) ATP binding (12.7%) ATP-dependent DNA damage sensor activity (12.7%)" "IPR013765 (11.6%) IPR020588 (11.6%) IPR027417 (11.6%)" "DNA recombination and repair protein RecA (11.6%) DNA recombination and repair protein RecA-like, ATP-binding domain (11.6%) P-loop containing nucleoside triphosphate hydrolase (11.6%)" AVDGEYTQSVADQEEIKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" TYHAAVVDEIRQVGNDDAIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.5.1.47 (100%) cysteine synthase (100%) GO:0006535 (50%) GO:0004124 (50%) cysteine biosynthetic process from serine (50%) cysteine synthase activity (50%) "IPR001216 (16.7%) IPR001926 (16.7%) IPR005856 (16.7%)" "Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site (16.7%) Tryptophan synthase beta chain-like, PALP domain (16.7%) Cysteine synthase (16.7%)" TFDLGTVSEVMEGAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.2.1 (100%) pantoate--beta-alanine ligase (AMP-forming) (100%) GO:0015940 (25%) GO:0005829 (25%) "GO:0004592 (25%) GO:0005524 (25%)" pantothenate biosynthetic process (25%) cytosol (25%) "pantoate-beta-alanine ligase activity (25%) ATP binding (25%)" "IPR003721 (33.3%) IPR014729 (33.3%) IPR042176 (33.3%)" "Pantoate-beta-alanine ligase (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (33.3%) Pantoate-beta-alanine ligase, C-terminal domain (33.3%)" SKAYEAIVKGEPMPQAGIPESLNVLLHELR Muribaculum gordoncarteri Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Muribaculum Muribaculum gordoncarteri 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.7%) IPR007121 (7.7%) IPR007641 (7.7%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.7%) RNA polymerase, beta subunit, conserved site (7.7%) RNA polymerase Rpb2, domain 7 (7.7%)" NYGECHYAIMDHR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.3%) GO:0006879 (14.3%)" GO:0005829 (14.3%) "GO:0004322 (14.3%) GO:0008198 (14.3%) GO:0008199 (14.3%)" "iron ion transport (14.3%) intracellular iron ion homeostasis (14.3%)" cytosol (14.3%) "ferroxidase activity (14.3%) ferrous iron binding (14.3%) ferric iron binding (14.3%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" SVEQIQDKVEQSLMEHGFYAEAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) GO:0009263 (25%) GO:0005971 (25%) "GO:0004748 (25%) GO:0005524 (25%)" deoxyribonucleotide biosynthetic process (25%) ribonucleoside-diphosphate reductase complex (25%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (25%) ATP binding (25%)" "IPR000788 (16.7%) IPR005144 (16.7%) IPR008926 (16.7%)" "Ribonucleotide reductase large subunit, C-terminal (16.7%) ATP-cone domain (16.7%) Ribonucleotide reductase R1 subunit, N-terminal (16.7%)" MKWETVGTPVEQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0009055 (24.1%) GO:0010181 (24.1%) GO:0016491 (22.4%)" "electron transfer activity (24.1%) FMN binding (24.1%) oxidoreductase activity (22.4%)" "IPR001226 (14.7%) IPR008254 (14.7%) IPR029039 (14.7%)" "Flavodoxin, conserved site (14.7%) Flavodoxin/nitric oxide synthase (14.7%) Flavoprotein-like superfamily (14.7%)" TTLGDIEELAALKEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (23.9%) "GO:0022627 (22.8%) GO:0005840 (1.5%) GO:0005737 (1%)" "GO:0003729 (23.9%) GO:0003735 (23.9%) GO:0003676 (1.5%)" translation (23.9%) "cytosolic small ribosomal subunit (22.8%) ribosome (1.5%) cytoplasm (1%)" "mRNA binding (23.9%) structural constituent of ribosome (23.9%) nucleic acid binding (1.5%)" "IPR003029 (25.9%) IPR012340 (25.9%) IPR050437 (24.4%)" "S1 domain (25.9%) Nucleic acid-binding, OB-fold (25.9%) Small ribosomal subunit protein bS1-like (24.4%)" DNTTIVNGAGAKENIQER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.1%) GO:0005737 (16.2%) "GO:0005524 (17.1%) GO:0140662 (17.1%) GO:0016853 (16.2%)" protein refolding (17.1%) cytoplasm (16.2%) "ATP binding (17.1%) ATP-dependent protein folding chaperone (17.1%) isomerase activity (16.2%)" "IPR001844 (17.1%) IPR002423 (17.1%) IPR018370 (17.1%)" "Chaperonin Cpn60/GroEL (17.1%) Chaperonin Cpn60/GroEL/TCP-1 family (17.1%) Chaperonin Cpn60, conserved site (17.1%)" MDTETVSPNFDDIRPLNNSEVKDAIEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0019698 (36.7%) GO:0042840 (36.7%)" GO:0016746 (26.7%) "D-galacturonate catabolic process (36.7%) D-glucuronate catabolic process (36.7%)" acyltransferase activity (26.7%) INNPALTAQILVSVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0000166 (25%) GO:0047850 (25%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "nucleotide binding (25%) diaminopimelate dehydrogenase activity (25%)" "IPR000683 (25%) IPR010190 (25%) IPR032094 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Diaminopimelate dehydrogenase, Ddh (25%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25%)" FLAGHAEELDLR root "3.4.13.18 (99.3%) 3.4.13.20 (0.5%) 3.4.13.- (0.1%)" "cytosol non-specific dipeptidase (99.3%) beta-Ala-His dipeptidase (0.5%) Dipeptidases (0.1%)" "GO:0006508 (25.1%) GO:0043171 (0.1%)" GO:0005829 (25.1%) "GO:0070573 (25.1%) GO:0046872 (24.2%) GO:0016805 (0.2%)" "proteolysis (25.1%) peptide catabolic process (0.1%)" cytosol (25.1%) "metallodipeptidase activity (25.1%) metal ion binding (24.2%) dipeptidase activity (0.2%)" "IPR001160 (33.4%) IPR011650 (33.4%) IPR002933 (32.5%)" "Peptidase M20C, Xaa-His dipeptidase (33.4%) Peptidase M20, dimerisation domain (33.4%) Peptidase M20 (32.5%)" NMFALLGKPGFEK Bacteria Bacteria 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.2%)" GO:0005829 (14.2%) "GO:0004347 (14.3%) GO:0097367 (14.3%) GO:0048029 (14.2%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.2%)" cytosol (14.2%) "glucose-6-phosphate isomerase activity (14.3%) carbohydrate derivative binding (14.3%) monosaccharide binding (14.2%)" "IPR001672 (19.9%) IPR018189 (19.9%) IPR046348 (19.9%)" "Phosphoglucose isomerase (PGI) (19.9%) Phosphoglucose isomerase, conserved site (19.9%) SIS domain superfamily (19.9%)" YYMNTYAMQTVHGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.3 (66.7%) 1.2.-.- (33.3%)" "2-oxoglutarate synthase (66.7%) Acting on the aldehyde or oxo group of donors (33.3%)" GO:0044281 (33.3%) "GO:0030976 (33.3%) GO:0016625 (29.4%) GO:0047553 (3.9%)" small molecule metabolic process (33.3%) "thiamine pyrophosphate binding (33.3%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (29.4%) 2-oxoglutarate synthase activity (3.9%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" MRNFDLSPLMR root "GO:0050821 (49.1%) GO:0009408 (0.6%) GO:1990169 (0.6%)" GO:0005737 (49.1%) GO:0042802 (0.6%) "protein stabilization (49.1%) response to heat (0.6%) stress response to copper ion (0.6%)" cytoplasm (49.1%) identical protein binding (0.6%) "IPR002068 (25.7%) IPR008978 (25.7%) IPR037913 (24.3%)" "Alpha crystallin/Hsp20 domain (25.7%) HSP20-like chaperone (25.7%) Small heat shock protein IbpA/IbpB, ACD domain (24.3%)" FKGEESTAEIGDNNLIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.129 (100%) acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (100%) "GO:0009245 (31%) GO:0008610 (2.4%)" GO:0016020 (31%) "GO:0008780 (33.3%) GO:0046872 (2.4%)" "lipid A biosynthetic process (31%) lipid biosynthetic process (2.4%)" membrane (31%) "acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity (33.3%) metal ion binding (2.4%)" "IPR001451 (20%) IPR010137 (20%) IPR011004 (20%)" "Hexapeptide repeat (20%) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (20%) Trimeric LpxA-like superfamily (20%)" NTTNPLVATGDGIAMVYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.3.16 (100%) L-aspartate oxidase (100%) GO:0034628 (33.9%) "GO:0005737 (31.7%) GO:0016020 (0.5%)" GO:0008734 (33.9%) 'de novo' NAD+ biosynthetic process from L-aspartate (33.9%) "cytoplasm (31.7%) membrane (0.5%)" L-aspartate oxidase activity (33.9%) "IPR003953 (17%) IPR005288 (17%) IPR036188 (17%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (17%) L-aspartate oxidase (17%) FAD/NAD(P)-binding domain superfamily (17%)" LGNTYPEITEMQTR Pseudomonadati Bacteria Pseudomonadati 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0050242 (25.5%) GO:0016301 (25.2%) GO:0005524 (24.7%)" "pyruvate, phosphate dikinase activity (25.5%) kinase activity (25.2%) ATP binding (24.7%)" "IPR000121 (10.2%) IPR010121 (10.2%) IPR015813 (10.2%)" "PEP-utilising enzyme, C-terminal (10.2%) Pyruvate, phosphate dikinase (10.2%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (10.2%)" ESEMWQTAVTVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.86 (94%) 1.1.1.- (6%)" "ketol-acid reductoisomerase (NADP(+)) (94%) With NAD(+) or NADP(+) as acceptor (6%)" "GO:0009097 (20.9%) GO:0009099 (20.9%)" GO:0070013 (0.3%) "GO:0004455 (20.9%) GO:0046872 (20.3%) GO:0016853 (16.5%)" "isoleucine biosynthetic process (20.9%) L-valine biosynthetic process (20.9%)" intracellular organelle lumen (0.3%) "ketol-acid reductoisomerase activity (20.9%) metal ion binding (20.3%) isomerase activity (16.5%)" "IPR000506 (16.8%) IPR008927 (16.8%) IPR013328 (16.8%)" "Ketol-acid reductoisomerase, C-terminal (16.8%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.8%) 6-phosphogluconate dehydrogenase, domain 2 (16.8%)" KYPGIIFTPEREPGNQILEVSGLSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003439 (20.1%) IPR027417 (20.1%) IPR032781 (20.1%)" "ABC transporter-like, ATP-binding domain (20.1%) P-loop containing nucleoside triphosphate hydrolase (20.1%) ABC-transporter extension domain (20.1%)" GSPVKNSALTSTGLVPFMER Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (19.8%) GO:0009263 (17.7%)" "GO:0004748 (20.8%) GO:0031419 (20.8%) GO:0005524 (17.7%)" "DNA biosynthetic process (19.8%) deoxyribonucleotide biosynthetic process (17.7%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.8%) cobalamin binding (20.8%) ATP binding (17.7%)" "IPR000788 (26.1%) IPR050862 (26.1%) IPR013344 (25.7%)" "Ribonucleotide reductase large subunit, C-terminal (26.1%) Ribonucleoside diphosphate reductase class-2 (26.1%) Ribonucleotide reductase, adenosylcobalamin-dependent (25.7%)" ATTERDVNQLTPR root 2.7.13.3 (100%) histidine kinase (100%) "GO:0006355 (20.5%) GO:0000160 (19.2%) GO:0042128 (18.5%)" "GO:0005886 (0.4%) GO:0005829 (0.2%) GO:0032993 (0.2%)" "GO:0003677 (20.5%) GO:0000166 (17.1%) GO:0005524 (1.3%)" "regulation of DNA-templated transcription (20.5%) phosphorelay signal transduction system (19.2%) nitrate assimilation (18.5%)" "plasma membrane (0.4%) cytosol (0.2%) protein-DNA complex (0.2%)" "DNA binding (20.5%) nucleotide binding (17.1%) ATP binding (1.3%)" "IPR000792 (16.5%) IPR016032 (16.5%) IPR036388 (16.5%)" "Transcription regulator LuxR, C-terminal (16.5%) Signal transduction response regulator, C-terminal effector (16.5%) Winged helix-like DNA-binding domain superfamily (16.5%)" EKAQAHIEAGAK Bacteria Bacteria 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (23.8%) GO:0006096 (3.8%)" GO:0005829 (0.4%) "GO:0051287 (24.2%) GO:0050661 (23.8%) GO:0004365 (12.8%)" "glucose metabolic process (23.8%) glycolytic process (3.8%)" cytosol (0.4%) "NAD binding (24.2%) NADP binding (23.8%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (12.8%)" "IPR020828 (16.9%) IPR020829 (16.9%) IPR020831 (16.9%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.9%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.9%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (16.9%)" GGANLPEDKQAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.15.5 (100%) peptidyl-dipeptidase Dcp (100%) GO:0006508 (19.2%) GO:0005829 (19.2%) "GO:0004180 (19.2%) GO:0004222 (19.2%) GO:0046872 (19.2%)" proteolysis (19.2%) cytosol (19.2%) "carboxypeptidase activity (19.2%) metalloendopeptidase activity (19.2%) metal ion binding (19.2%)" "IPR001567 (20%) IPR024077 (20%) IPR024079 (20%)" "Peptidase M3A/M3B catalytic domain (20%) Neurolysin/Thimet oligopeptidase, domain 2 (20%) Metallopeptidase, catalytic domain superfamily (20%)" SDREASEGCVLVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" IVSPVVAQDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" VIDKTTEYLLCEVQNEATLGSR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (16.7%) "GO:0000287 (16.7%) GO:0004743 (16.7%) GO:0005524 (16.7%)" response to stress (16.7%) "magnesium ion binding (16.7%) pyruvate kinase activity (16.7%) ATP binding (16.7%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" RPIGSFIFLGTTGVGKTELAK root "GO:0034605 (18.3%) GO:0042026 (17.6%) GO:0006508 (4.1%)" GO:0005737 (18.3%) "GO:0005524 (18.3%) GO:0016887 (18.3%) GO:0008233 (4.1%)" "cellular response to heat (18.3%) protein refolding (17.6%) proteolysis (4.1%)" cytoplasm (18.3%) "ATP binding (18.3%) ATP hydrolysis activity (18.3%) peptidase activity (4.1%)" "IPR003959 (8.3%) IPR050130 (8.3%) IPR001270 (8.3%)" "ATPase, AAA-type, core (8.3%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.3%) ClpA/B family (8.3%)" VSLAADPVEEIKVGFDILK root "1.17.7.3 (89.3%) 1.17.7.1 (10.7%)" "(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (89.3%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) (10.7%)" "GO:0016114 (17.3%) GO:0019288 (17.2%) GO:0008360 (0%)" "GO:0005829 (0%) GO:0005886 (0%)" "GO:0046429 (17.3%) GO:0051539 (17.3%) GO:0005506 (17%)" "terpenoid biosynthetic process (17.3%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.2%) regulation of cell shape (0%)" "cytosol (0%) plasma membrane (0%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.3%) 4 iron, 4 sulfur cluster binding (17.3%) iron ion binding (17%)" "IPR004588 (24.7%) IPR011005 (24.7%) IPR045854 (24.6%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (24.7%) Dihydropteroate synthase-like superfamily (24.7%) Nitrite and sulphite reductase 4Fe-4S domain-like superfamily (24.6%)" GASVEELRELLGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.13.12.16 (100%) nitronate monooxygenase (100%) "GO:0018580 (92.3%) GO:0051213 (7.7%)" "nitronate monooxygenase activity (92.3%) dioxygenase activity (7.7%)" "IPR004136 (50%) IPR013785 (50%)" "Nitronate monooxygenase (50%) Aldolase-type TIM barrel (50%)" IVDAQGNDVLIPGTDMPAQYFLPGK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (14.5%) GO:0006352 (0%) GO:0006412 (0%)" "GO:0000428 (14.8%) GO:0005829 (13.1%) GO:0000345 (0%)" "GO:0003899 (14.6%) GO:0003677 (14.5%) GO:0000287 (13.5%)" "DNA-templated transcription (14.5%) DNA-templated transcription initiation (0%) translation (0%)" "DNA-directed RNA polymerase complex (14.8%) cytosol (13.1%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA-directed RNA polymerase activity (14.6%) DNA binding (14.5%) magnesium ion binding (13.5%)" "IPR007081 (9.4%) IPR045867 (9.4%) IPR007083 (9.2%)" "RNA polymerase Rpb1, domain 5 (9.4%) DNA-directed RNA polymerase, subunit beta-prime (9.4%) RNA polymerase Rpb1, domain 4 (9.2%)" YASEVAPVPIVNAGDGANQHPSQTMLDLYSIYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006520 (16.7%) GO:0006207 (16.5%) GO:0044205 (16.5%)" GO:0005829 (16.5%) "GO:0016597 (16.7%) GO:0004070 (16.5%) GO:0016743 (0.2%)" "amino acid metabolic process (16.7%) 'de novo' pyrimidine nucleobase biosynthetic process (16.5%) 'de novo' UMP biosynthetic process (16.5%)" cytosol (16.5%) "amino acid binding (16.7%) aspartate carbamoyltransferase activity (16.5%) carboxyl- or carbamoyltransferase activity (0.2%)" "IPR006130 (20.1%) IPR006132 (20.1%) IPR036901 (20.1%)" "Aspartate/ornithine carbamoyltransferase (20.1%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20.1%) Aspartate/ornithine carbamoyltransferase superfamily (20.1%)" SLFAHPCNTHER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.25 (100%) 4-alpha-glucanotransferase (100%) "GO:0005975 (23.7%) GO:0006508 (0.9%)" GO:0005737 (24.6%) "GO:2001070 (24.6%) GO:0004134 (23.7%) GO:0008234 (0.9%)" "carbohydrate metabolic process (23.7%) proteolysis (0.9%)" cytoplasm (24.6%) "starch binding (24.6%) 4-alpha-glucanotransferase activity (23.7%) cysteine-type peptidase activity (0.9%)" "IPR002044 (16.9%) IPR013783 (16.9%) IPR013784 (16.9%)" "Carbohydrate binding module family 20 (16.9%) Immunoglobulin-like fold (16.9%) Carbohydrate-binding-like fold (16.9%)" VADFIEIGTLMAHDALDRAESCGGHFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (15%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (15%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" MNKNLQEGIALAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20.3%) IPR013785 (20.3%) IPR035990 (20.3%)" "Triosephosphate isomerase (20.3%) Aldolase-type TIM barrel (20.3%) Triosephosphate isomerase superfamily (20.3%)" ILEADGQSQGNGAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR031025 (50%) IPR032295 (50%)" "LruC domain (50%) Domain of unknown function DUF4842 (50%)" AYELDQLPNEKGK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae GO:0016740 (100%) transferase activity (100%) "IPR011990 (35.2%) IPR019734 (35.2%) IPR051685 (29.6%)" "Tetratricopeptide-like helical domain superfamily (35.2%) Tetratricopeptide repeat (35.2%) Ycf3/AcsC/BcsC/TPR Multifunctional (29.6%)" GTLHWVSCAHCQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (25%) GO:0005829 (25%) "GO:0004819 (25%) GO:0005524 (25%)" glutaminyl-tRNA aminoacylation (25%) cytosol (25%) "glutamine-tRNA ligase activity (25%) ATP binding (25%)" "IPR000924 (11.1%) IPR004514 (11.1%) IPR011035 (11.1%)" "Glutamyl/glutaminyl-tRNA synthetase (11.1%) Glutamine-tRNA synthetase (11.1%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (11.1%)" YITGECPHCHSEGAYGDQCEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.9%) GO:0005829 (16.9%) "GO:0004825 (16.9%) GO:0005524 (16.9%) GO:0000049 (16.3%)" methionyl-tRNA aminoacylation (16.9%) cytosol (16.9%) "methionine-tRNA ligase activity (16.9%) ATP binding (16.9%) tRNA binding (16.3%)" "IPR015413 (8.5%) IPR023458 (8.5%) IPR029038 (8.5%)" "Methionyl/Leucyl tRNA synthetase (8.5%) Methionine-tRNA ligase, type 1 (8.5%) Methionyl-tRNA synthetase, Zn-domain (8.5%)" FFPAFVNESNGAVNTEEGVRR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" VALLGFGSFSVSEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" SRPNLILCGDYNICHEPIDIHDPVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.1.11.2 (100%) exodeoxyribonuclease III (100%) GO:0006284 (16.7%) "GO:0003677 (16.7%) GO:0003906 (16.7%) GO:0008081 (16.7%)" base-excision repair (16.7%) "DNA binding (16.7%) DNA-(apurinic or apyrimidinic site) endonuclease activity (16.7%) phosphoric diester hydrolase activity (16.7%)" "IPR004808 (24.8%) IPR005135 (24.8%) IPR020847 (24.8%)" "AP endonuclease 1 (24.8%) Endonuclease/exonuclease/phosphatase (24.8%) AP endonuclease 1, binding site (24.8%)" GWDSNWYGGNDYGDSLLEDSKIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) GO:0022627 (20%) "GO:0003729 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) cytosolic small ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001351 (11.2%) IPR004044 (11.2%) IPR004087 (11.2%)" "Small ribosomal subunit protein uS3, C-terminal (11.2%) K Homology domain, type 2 (11.2%) K Homology domain (11.2%)" EFIGAVIGPGGK root 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.3%) GO:0006396 (14.1%) GO:0006401 (0%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "mRNA catabolic process (14.3%) RNA processing (14.1%) RNA catabolic process (0%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR004088 (8%) IPR012162 (8%) IPR004087 (8%)" "K Homology domain, type 1 (8%) Polyribonucleotide nucleotidyltransferase (8%) K Homology domain (8%)" IIEPNYEQLSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (13.6%) GO:0005737 (0.6%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (13.6%) cytoplasm (0.6%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" AKIELSSAQQTDVNLPYITADATGPK root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0051301 (0.2%) GO:0006260 (0.1%) GO:0042026 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0005524 (27.4%) GO:0140662 (27.4%) GO:0051082 (24.9%)" "cell division (0.2%) DNA replication (0.1%) protein refolding (0.1%)" "cytosol (0.1%) cytoplasm (0%) plasma membrane (0%)" "ATP binding (27.4%) ATP-dependent protein folding chaperone (27.4%) unfolded protein binding (24.9%)" "IPR013126 (17.2%) IPR043129 (17.2%) IPR018181 (17.2%)" "Heat shock protein 70 family (17.2%) ATPase, nucleotide binding domain (17.2%) Heat shock protein 70, conserved site (17.2%)" ASDYVSLTSYTHHPFYTQFPLEIQDNWR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006508 (19.6%) GO:0009636 (19.6%) GO:0043418 (19.6%)" GO:0005737 (19.6%) "GO:0070005 (19.6%) GO:0046872 (1.8%)" "proteolysis (19.6%) response to toxic substance (19.6%) homocysteine catabolic process (19.6%)" cytoplasm (19.6%) "cysteine-type aminopeptidase activity (19.6%) metal ion binding (1.8%)" "IPR000169 (33.3%) IPR004134 (33.3%) IPR038765 (33.3%)" "Cysteine peptidase, cysteine active site (33.3%) Peptidase C1B, bleomycin hydrolase (33.3%) Papain-like cysteine peptidase superfamily (33.3%)" NAEEVGLQLRPNQVIVFGSPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016787 (100%) hydrolase activity (100%) "IPR001466 (20%) IPR005180 (20%) IPR012338 (20%)" "Beta-lactamase-related (20%) Domain of unknown function DUF302 (20%) Beta-lactamase/transpeptidase-like (20%)" ANVYDTANQMAADIK Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus "IPR010368 (50%) IPR023378 (50%)" "Control of competence regulator ComK, YlbF/YmcA (50%) YheA/YmcA-like domain superfamily (50%)" GEDQLFDQLRPLVER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (10.9%) GO:0017038 (10.9%) GO:0043952 (10.9%)" "GO:0005829 (10.9%) GO:0005886 (10.9%) GO:0031522 (10.9%)" "GO:0005524 (10.9%) GO:0046872 (10.9%) GO:0008564 (1.6%)" "protein targeting (10.9%) protein import (10.9%) protein transport by the Sec complex (10.9%)" "cytosol (10.9%) plasma membrane (10.9%) cell envelope Sec protein transport complex (10.9%)" "ATP binding (10.9%) metal ion binding (10.9%) protein-exporting ATPase activity (1.6%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" LIDGTVFDSSVAR root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (46.8%) GO:0010467 (0.1%) GO:0061077 (0.1%)" "GO:0042597 (5.2%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0003755 (47%) GO:0016853 (0.6%) GO:0005528 (0.1%)" "protein folding (46.8%) gene expression (0.1%) obsolete chaperone-mediated protein folding (0.1%)" "periplasmic space (5.2%) cytosol (0.1%) membrane (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (47%) isomerase activity (0.6%) FK506 binding (0.1%)" "IPR001179 (25.5%) IPR046357 (25.5%) IPR000774 (25.3%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (25.5%) Peptidyl-prolyl cis-trans isomerase domain superfamily (25.5%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25.3%)" EYNIDTIYNLAALLSVVAESKPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.1.3.- (100%) Acting on carbohydrates and derivatives (100%) GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" GLRNEDGTGVLVGLTK Bacteria Bacteria "2.3.3.16 (60%) 2.3.3.1 (40%)" "citrate synthase (unknown stereospecificity) (60%) citrate (Si)-synthase (40%)" "GO:0005975 (25.1%) GO:0006099 (25.1%)" GO:0005829 (24.8%) "GO:0036440 (21.2%) GO:0046912 (3.8%)" "carbohydrate metabolic process (25.1%) tricarboxylic acid cycle (25.1%)" cytosol (24.8%) "citrate synthase activity (21.2%) acyltransferase activity, acyl groups converted into alkyl on transfer (3.8%)" "IPR002020 (20.2%) IPR016142 (20.2%) IPR036969 (20.2%)" "Citrate synthase (20.2%) Citrate synthase-like, large alpha subdomain (20.2%) Citrate synthase superfamily (20.2%)" IAEQDFIPDELIIHSEFK Escherichia coli Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli "2.5.1.56 (50%) 2.5.1.57 (33.3%) 1.2.4.1 (16.7%)" "N-acetylneuraminate synthase (50%) N-acylneuraminate-9-phosphate synthase (33.3%) pyruvate dehydrogenase (acetyl-transferring) (16.7%)" "GO:0016051 (29.4%) GO:0070085 (29.4%)" "GO:0047444 (29.4%) GO:0050462 (8.8%) GO:0004739 (2.9%)" "carbohydrate biosynthetic process (29.4%) obsolete glycosylation (29.4%)" "N-acylneuraminate-9-phosphate synthase activity (29.4%) N-acetylneuraminate synthase activity (8.8%) pyruvate dehydrogenase (acetyl-transferring) activity (2.9%)" "IPR006190 (14.5%) IPR013132 (14.5%) IPR013785 (14.5%)" "Antifreeze-like/N-acetylneuraminic acid synthase, SAF domain (14.5%) PseI/NeuA/B-like (14.5%) Aldolase-type TIM barrel (14.5%)" IYFVNDLPLTPLATAYAR Bacteria Bacteria "2.1.2.3 (87.5%) 3.5.4.10 (12.5%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (87.5%) IMP cyclohydrolase (12.5%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (25%) IPR016193 (25%) IPR024050 (25%)" "Bifunctional purine biosynthesis protein PurH-like (25%) Cytidine deaminase-like (25%) AICAR transformylase, insert domain superfamily (25%)" LKDVVNGYVIER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043043 (32.8%) "GO:0005829 (32.2%) GO:0005737 (1.1%)" GO:0003746 (33.9%) peptide biosynthetic process (32.8%) "cytosol (32.2%) cytoplasm (1.1%)" translation elongation factor activity (33.9%) "IPR001059 (11.2%) IPR008991 (11.2%) IPR012340 (11.2%)" "Translation elongation factor P/YeiP, central (11.2%) Translation protein SH3-like domain superfamily (11.2%) Nucleic acid-binding, OB-fold (11.2%)" ITNFEMESSSLAGLAALMGHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.2.3 (100%) uridine phosphorylase (100%) GO:0006152 (30.8%) GO:0005829 (30.8%) "GO:0004731 (30.8%) GO:0004850 (7.7%)" purine nucleoside catabolic process (30.8%) cytosol (30.8%) "purine-nucleoside phosphorylase activity (30.8%) uridine phosphorylase activity (7.7%)" "IPR000845 (50%) IPR035994 (50%)" "Nucleoside phosphorylase domain (50%) Nucleoside phosphorylase superfamily (50%)" ASLDYFTGDELAAK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20.1%) GO:0009263 (19.4%)" "GO:0004748 (20.1%) GO:0031419 (20.1%) GO:0005524 (19.4%)" "DNA biosynthetic process (20.1%) deoxyribonucleotide biosynthetic process (19.4%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.1%) cobalamin binding (20.1%) ATP binding (19.4%)" "IPR000788 (25.2%) IPR013344 (25.2%) IPR050862 (25.2%)" "Ribonucleotide reductase large subunit, C-terminal (25.2%) Ribonucleotide reductase, adenosylcobalamin-dependent (25.2%) Ribonucleoside diphosphate reductase class-2 (25.2%)" SYMNICFVMNDEYKDLEADFLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.7%) GO:0008615 (19.7%)" GO:0005737 (19.7%) "GO:0004648 (19.7%) GO:0030170 (19.7%) GO:0008483 (1.5%)" "L-serine biosynthetic process (19.7%) pyridoxine biosynthetic process (19.7%)" cytoplasm (19.7%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.7%) pyridoxal phosphate binding (19.7%) transaminase activity (1.5%)" "IPR000192 (20.9%) IPR022278 (20.9%) IPR015421 (19.4%)" "Aminotransferase class V domain (20.9%) Phosphoserine aminotransferase (20.9%) Pyridoxal phosphate-dependent transferase, major domain (19.4%)" FRDEGRDVLLFVDNIYR root "7.1.2.2 (97.1%) 3.6.3.14 (2.8%) 3.6.1.15 (0.1%)" "H(+)-transporting two-sector ATPase (97.1%) Transferred entry: 7.1.2.2 (2.8%) nucleoside-triphosphate phosphatase (0.1%)" "GO:0042776 (0%) GO:0042777 (0%)" "GO:0045259 (24.5%) GO:0005886 (21%) GO:0005739 (0%)" "GO:0005524 (24.5%) GO:0046933 (24.5%) GO:0016787 (4.3%)" "proton motive force-driven mitochondrial ATP synthesis (0%) proton motive force-driven plasma membrane ATP synthesis (0%)" "proton-transporting ATP synthase complex (24.5%) plasma membrane (21%) mitochondrion (0%)" "ATP binding (24.5%) proton-transporting ATP synthase activity, rotational mechanism (24.5%) hydrolase activity (4.3%)" "IPR000194 (11.6%) IPR027417 (11.6%) IPR050053 (11.6%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11.6%) P-loop containing nucleoside triphosphate hydrolase (11.6%) ATPase alpha/beta chains (11.6%)" NAAGGYSLVAVKDVTDGKLSYEGSTGPNAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) LAHFDREVIPERR root 1.11.1.6 (100%) catalase (100%) "GO:0042744 (16.5%) GO:0042542 (16.5%) GO:0006979 (0%)" "GO:0005737 (16.5%) GO:0042597 (1.4%)" "GO:0004096 (16.5%) GO:0020037 (16.5%) GO:0046872 (16.1%)" "hydrogen peroxide catabolic process (16.5%) response to hydrogen peroxide (16.5%) response to oxidative stress (0%)" "cytoplasm (16.5%) periplasmic space (1.4%)" "catalase activity (16.5%) heme binding (16.5%) metal ion binding (16.1%)" "IPR011614 (12.9%) IPR018028 (12.9%) IPR020835 (12.9%)" "Catalase core domain (12.9%) Catalase, mono-functional, haem-containing (12.9%) Catalase superfamily (12.9%)" VLENAEGDRTTPSIIAYTQDGETLVGQPAKR root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0006260 (0.1%) GO:0042026 (0.1%) GO:0051085 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0005524 (26.2%) GO:0140662 (26.2%) GO:0051082 (24.7%)" "DNA replication (0.1%) protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytosol (0.1%) cytoplasm (0%) plasma membrane (0%)" "ATP binding (26.2%) ATP-dependent protein folding chaperone (26.2%) unfolded protein binding (24.7%)" "IPR013126 (17.1%) IPR043129 (17.1%) IPR018181 (17.1%)" "Heat shock protein 70 family (17.1%) ATPase, nucleotide binding domain (17.1%) Heat shock protein 70, conserved site (17.1%)" DPAANPYLCFAALLMAGLDGIK root 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (14.8%) GO:0019740 (14.8%) GO:0009314 (0%)" "GO:0005737 (14.8%) GO:0016020 (14.8%) GO:0005829 (0%)" "GO:0004356 (14.8%) GO:0005524 (13%) GO:0046872 (12.9%)" "glutamine biosynthetic process (14.8%) nitrogen utilization (14.8%) response to radiation (0%)" "cytoplasm (14.8%) membrane (14.8%) cytosol (0%)" "glutamine synthetase activity (14.8%) ATP binding (13%) metal ion binding (12.9%)" "IPR008146 (13.7%) IPR014746 (13.7%) IPR027303 (12.7%)" "Glutamine synthetase, catalytic domain (13.7%) Glutamine synthetase/guanido kinase, catalytic domain (13.7%) Glutamine synthetase, glycine-rich site (12.7%)" ISAFDVVLPEGIPYK Pseudomonadati Bacteria Pseudomonadati 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (24.9%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (24.9%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR028923 (50%) IPR018236 (49.7%) IPR001636 (0.3%)" "SAICAR synthetase/ADE2, N-terminal (50%) SAICAR synthetase, conserved site (49.7%) Phosphoribosylaminoimidazole-succinocarboxamide synthase (0.3%)" GLCAIYDTYLGQCPEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0006508 (20%) GO:0009636 (20%) GO:0043418 (20%)" GO:0005737 (20%) GO:0070005 (20%) "proteolysis (20%) response to toxic substance (20%) homocysteine catabolic process (20%)" cytoplasm (20%) cysteine-type aminopeptidase activity (20%) "IPR004134 (50%) IPR038765 (50%)" "Peptidase C1B, bleomycin hydrolase (50%) Papain-like cysteine peptidase superfamily (50%)" IREYAETYGCK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.4.1.4 (85.7%) 1.4.1.3 (14.3%)" "glutamate dehydrogenase (NADP(+)) (85.7%) glutamate dehydrogenase [NAD(P)(+)] (14.3%)" GO:0006537 (26.9%) GO:0005829 (26.9%) "GO:0004354 (26.9%) GO:0000166 (19.2%)" glutamate biosynthetic process (26.9%) cytosol (26.9%) "glutamate dehydrogenase (NADP+) activity (26.9%) nucleotide binding (19.2%)" "IPR006095 (11.2%) IPR006096 (11.2%) IPR006097 (11.2%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.2%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.2%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.2%)" TSLVSPEGANKDNYR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) "GO:0004553 (41.4%) GO:0004565 (8.6%)" carbohydrate metabolic process (50%) "hydrolase activity, hydrolyzing O-glycosyl compounds (41.4%) beta-galactosidase activity (8.6%)" "IPR006102 (7.8%) IPR006103 (7.8%) IPR006104 (7.8%)" "Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.8%) Glycoside hydrolase family 2, catalytic domain (7.8%) Glycosyl hydrolases family 2, sugar binding domain (7.8%)" GAPGSTLIVDDFSILSK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR024311 (25%) IPR025112 (25%) IPR032186 (25%)" "Lipocalin-like domain (25%) Putative carbohydrate metabolism domain (25%) Domain of unknown function DUF5018 (25%)" TRAEVTGSGKKPWR root "GO:0006412 (19.8%) GO:0006353 (0.2%) GO:0006417 (0.2%)" "GO:0005840 (20.1%) GO:1990904 (19.8%) GO:0022625 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.6%) GO:0001070 (0%)" "translation (19.8%) DNA-templated transcription termination (0.2%) regulation of translation (0.2%)" "ribosome (20.1%) ribonucleoprotein complex (19.8%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.6%) RNA-binding transcription regulator activity (0%)" "IPR002136 (33.1%) IPR013005 (33.1%) IPR023574 (33.1%)" "Large ribosomal subunit protein uL4 (33.1%) Large ribosomal subunit protein uL4-like (33.1%) Large ribosomal subunit protein uL4 domain superfamily (33.1%)" LNPETQRPMTFLNDTNVEDAIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.4.25 (100%) (d)CMP kinase (100%) "GO:0006220 (17.7%) GO:0015949 (17.7%)" GO:0005829 (17.7%) "GO:0005524 (17.7%) GO:0036431 (17.7%) GO:0036430 (11.3%)" "pyrimidine nucleotide metabolic process (17.7%) nucleobase-containing small molecule interconversion (17.7%)" cytosol (17.7%) "ATP binding (17.7%) dCMP kinase activity (17.7%) CMP kinase activity (11.3%)" "IPR003136 (33.3%) IPR011994 (33.3%) IPR027417 (33.3%)" "Cytidylate kinase (33.3%) Cytidylate kinase domain (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" LSIVKNEIIDIFHR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004826 (16.7%) GO:0005524 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) phenylalanine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002319 (14.7%) IPR004188 (14.7%) IPR045864 (14.7%)" "Phenylalanyl-tRNA synthetase (14.7%) Phenylalanine-tRNA ligase, class II, N-terminal (14.7%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.7%)" TQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006099 (24.9%) GO:0006108 (22.1%) GO:0019752 (2%)" "GO:0005737 (24.9%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0030060 (24.9%) GO:0016491 (0.4%) GO:0016615 (0.1%)" "tricarboxylic acid cycle (24.9%) malate metabolic process (22.1%) carboxylic acid metabolic process (2%)" "cytoplasm (24.9%) cytosol (0.1%) membrane (0.1%)" "L-malate dehydrogenase (NAD+) activity (24.9%) oxidoreductase activity (0.4%) malate dehydrogenase activity (0.1%)" "IPR001236 (13.2%) IPR036291 (13.2%) IPR022383 (12.7%)" "Lactate/malate dehydrogenase, N-terminal (13.2%) NAD(P)-binding domain superfamily (13.2%) Lactate/malate dehydrogenase, C-terminal (12.7%)" DMSLDDVVTYIAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" LWEIVKDTLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0034599 (33.3%) GO:0005737 (33.3%) GO:0016491 (33.3%) cellular response to oxidative stress (33.3%) cytoplasm (33.3%) oxidoreductase activity (33.3%) "IPR000415 (33.3%) IPR029479 (33.3%) IPR033877 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase Frm2/Hbn1-like (33.3%)" KGNEQINYNAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" WVSIFAGLDSIRDCIAFPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.12 (100%) aspartate--tRNA ligase (100%) "GO:0006422 (20.2%) GO:0006418 (0.1%)" GO:0005737 (19.7%) "GO:0004815 (20.3%) GO:0005524 (20.3%) GO:0003676 (19.2%)" "aspartyl-tRNA aminoacylation (20.2%) tRNA aminoacylation for protein translation (0.1%)" cytoplasm (19.7%) "aspartate-tRNA ligase activity (20.3%) ATP binding (20.3%) nucleic acid binding (19.2%)" "IPR045864 (9.5%) IPR004364 (9.4%) IPR002312 (9.2%)" "Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (9.5%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.4%) Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.2%)" YEMLDVVLIKDNEGVER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (16.8%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (16.8%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" SMADKLAAEIIDAFNEQGGAYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.5%) GO:0015935 (20.5%) "GO:0003735 (20.5%) GO:0019843 (20.5%) GO:0000049 (17.8%)" translation (20.5%) small ribosomal subunit (20.5%) "structural constituent of ribosome (20.5%) rRNA binding (20.5%) tRNA binding (17.8%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" ALVIIGGDDSNTNACVLAEYYK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0046872 (14.3%) GO:0047334 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) metal ion binding (14.3%) diphosphate-fructose-6-phosphate 1-phosphotransferase activity (14.3%)" "IPR000023 (25.1%) IPR022953 (25.1%) IPR035966 (25.1%)" "Phosphofructokinase domain (25.1%) ATP-dependent 6-phosphofructokinase (25.1%) Phosphofructokinase superfamily (25.1%)" VVIAYEPIWAIGTGK root "5.3.1.1 (98.9%) 2.7.2.3 (1%) 1.2.1.12 (0.1%)" "triose-phosphate isomerase (98.9%) phosphoglycerate kinase (1%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (0.1%)" "GO:0006096 (16.6%) GO:0006094 (16.6%) GO:0019563 (16.3%)" "GO:0005829 (16.6%) GO:0005737 (0%) GO:0005739 (0%)" "GO:0004807 (16.6%) GO:0004618 (0.2%) GO:0005524 (0.2%)" "glycolytic process (16.6%) gluconeogenesis (16.6%) glycerol catabolic process (16.3%)" "cytosol (16.6%) cytoplasm (0%) mitochondrion (0%)" "triose-phosphate isomerase activity (16.6%) phosphoglycerate kinase activity (0.2%) ATP binding (0.2%)" "IPR000652 (20.2%) IPR020861 (20.2%) IPR013785 (20.2%)" "Triosephosphate isomerase (20.2%) Triosephosphate isomerase, active site (20.2%) Aldolase-type TIM barrel (20.2%)" GVYYVADCQADGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR021533 (100%) Putative beta-lactamase-inhibitor-like, PepSY-like (100%) MVHFIGKDNIVFHCIVFPSMLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.5%) GO:0005829 (16.5%) "GO:0004825 (17%) GO:0005524 (17%) GO:0000049 (16.5%)" methionyl-tRNA aminoacylation (16.5%) cytosol (16.5%) "methionine-tRNA ligase activity (17%) ATP binding (17%) tRNA binding (16.5%)" "IPR009080 (8.5%) IPR014729 (8.5%) IPR015413 (8.5%)" "Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (8.5%) Rossmann-like alpha/beta/alpha sandwich fold (8.5%) Methionyl/Leucyl tRNA synthetase (8.5%)" DAVPGTDFMPLQVEYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.3%) GO:0006396 (14.2%) GO:0006401 (0.1%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "mRNA catabolic process (14.3%) RNA processing (14.2%) RNA catabolic process (0.1%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8%) IPR012162 (8%) IPR015847 (8%)" "Exoribonuclease, phosphorolytic domain 1 (8%) Polyribonucleotide nucleotidyltransferase (8%) Exoribonuclease, phosphorolytic domain 2 (8%)" DVAEILLEGLR root 2.6.1.16 (100%) glutamine--fructose-6-phosphate transaminase (isomerizing) (100%) "GO:0006002 (12.8%) GO:0006487 (12.8%) GO:0006047 (12.8%)" GO:0005829 (12.8%) "GO:0004360 (12.8%) GO:0097367 (12.4%) GO:0008483 (0.1%)" "fructose 6-phosphate metabolic process (12.8%) protein N-linked glycosylation (12.8%) UDP-N-acetylglucosamine metabolic process (12.8%)" cytosol (12.8%) "glutamine-fructose-6-phosphate transaminase (isomerizing) activity (12.8%) carbohydrate derivative binding (12.4%) transaminase activity (0.1%)" "IPR017932 (12.8%) IPR029055 (12.8%) IPR047084 (12.6%)" "Glutamine amidotransferase type 2 domain (12.8%) Nucleophile aminohydrolases, N-terminal (12.8%) Glucosamine-fructose-6-phosphate aminotransferase, isomerising, N-terminal domain (12.6%)" LVGQNQTYTVQEGDKNLQAIAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.-.-.- (100%) Transferases (100%) "GO:0008360 (14.3%) GO:0018104 (14.3%) GO:0071555 (14.3%)" "GO:0005576 (14.2%) GO:0042597 (14%)" "GO:0016757 (14.3%) GO:0071972 (14.3%) GO:0016740 (0.3%)" "regulation of cell shape (14.3%) peptidoglycan-protein cross-linking (14.3%) cell wall organization (14.3%)" "extracellular region (14.2%) periplasmic space (14%)" "glycosyltransferase activity (14.3%) peptidoglycan L,D-transpeptidase activity (14.3%) transferase activity (0.3%)" "IPR018392 (17%) IPR036779 (17%) IPR005490 (16.6%)" "LysM domain (17%) LysM domain superfamily (17%) L,D-transpeptidase catalytic domain (16.6%)" LTEAGFTADEVAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" MNKIIELLGNQAEYYLNHTCK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (48.8%) "GO:0004332 (48.8%) GO:0016829 (2.4%)" glycolytic process (48.8%) "fructose-bisphosphate aldolase activity (48.8%) lyase activity (2.4%)" "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" NLDPSCVAADKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0051301 (50%) GO:0009579 (50%) cell division (50%) thylakoid (50%) "IPR011990 (39.5%) IPR019734 (39.5%) IPR051685 (20.9%)" "Tetratricopeptide-like helical domain superfamily (39.5%) Tetratricopeptide repeat (39.5%) Ycf3/AcsC/BcsC/TPR Multifunctional (20.9%)" MKVLVATEKPFAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.95 (69.2%) 1.1.1.290 (23.1%) 1.1.1.81 (7.7%)" "phosphoglycerate dehydrogenase (69.2%) 4-phosphoerythronate dehydrogenase (23.1%) hydroxypyruvate reductase (7.7%)" GO:0006564 (0.6%) "GO:0051287 (47.6%) GO:0016616 (38.6%) GO:0004617 (6.6%)" L-serine biosynthetic process (0.6%) "NAD binding (47.6%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (38.6%) phosphoglycerate dehydrogenase activity (6.6%)" "IPR006139 (32.9%) IPR006140 (32.9%) IPR036291 (32.9%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (32.9%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (32.9%) NAD(P)-binding domain superfamily (32.9%)" HGFGGVGQSTHGQHNR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (22.3%) "GO:0022625 (11.3%) GO:0005840 (10.9%) GO:1990904 (10.9%)" "GO:0003735 (22.3%) GO:0019843 (22.3%)" translation (22.3%) "cytosolic large ribosomal subunit (11.3%) ribosome (10.9%) ribonucleoprotein complex (10.9%)" "structural constituent of ribosome (22.3%) rRNA binding (22.3%)" "IPR000597 (25.3%) IPR009000 (25.3%) IPR019927 (25.3%)" "Large ribosomal subunit protein uL3 (25.3%) Translation protein, beta-barrel domain superfamily (25.3%) Large ribosomal subunit protein uL3, bacteria/organella (25.3%)" LTELVETSVETSRGEVEALKQAYYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR007139 (100%) Protein of unknown function DUF349 (100%) IIRPTVEGLKAEHIDYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0006189 (20%) GO:0009113 (20%)" "GO:0004637 (20%) GO:0005524 (20%) GO:0046872 (20%)" "'de novo' IMP biosynthetic process (20%) purine nucleobase biosynthetic process (20%)" "phosphoribosylamine-glycine ligase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000115 (11.1%) IPR011054 (11.1%) IPR011761 (11.1%)" "Phosphoribosylglycinamide synthetase (11.1%) Rudiment single hybrid motif (11.1%) ATP-grasp fold (11.1%)" HGESQWNKENR root 5.4.2.11 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (100%) "GO:0006096 (33.4%) GO:0006094 (32%) GO:0061621 (0.2%)" "GO:0005829 (0.2%) GO:0005737 (0.1%)" "GO:0004619 (33.4%) GO:0016853 (0.3%) GO:0016868 (0.3%)" "glycolytic process (33.4%) gluconeogenesis (32%) canonical glycolysis (0.2%)" "cytosol (0.2%) cytoplasm (0.1%)" "phosphoglycerate mutase activity (33.4%) isomerase activity (0.3%) intramolecular phosphotransferase activity (0.3%)" "IPR005952 (25.2%) IPR013078 (25.2%) IPR029033 (24.8%)" "Phosphoglycerate mutase 1 (25.2%) Histidine phosphatase superfamily, clade-1 (25.2%) Histidine phosphatase superfamily (24.8%)" ILDCVQTGYTLNGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006457 (16.7%) GO:0005737 (16.7%) "GO:0000774 (16.7%) GO:0042803 (16.7%) GO:0051082 (16.7%)" protein folding (16.7%) cytoplasm (16.7%) "adenyl-nucleotide exchange factor activity (16.7%) protein homodimerization activity (16.7%) unfolded protein binding (16.7%)" "IPR000740 (33.3%) IPR009012 (33.3%) IPR013805 (33.3%)" "GrpE nucleotide exchange factor (33.3%) GrpE nucleotide exchange factor, head (33.3%) GrpE nucleotide exchange factor, coiled-coil (33.3%)" IVAATEKGDYDYTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.1.- (100%) Methyltransferases (100%) "GO:0032259 (20.1%) GO:0006396 (19.9%)" GO:0005829 (19.9%) "GO:0003723 (19.9%) GO:0008173 (19.9%) GO:0008168 (0.2%)" "methylation (20.1%) RNA processing (19.9%)" cytosol (19.9%) "RNA binding (19.9%) RNA methyltransferase activity (19.9%) methyltransferase activity (0.2%)" "IPR001537 (16.8%) IPR004441 (16.8%) IPR029026 (16.8%)" "tRNA/rRNA methyltransferase, SpoU type (16.8%) RNA methyltransferase TrmH (16.8%) tRNA (guanine-N1-)-methyltransferase, N-terminal (16.8%)" DAQTANIMFLIQQANLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" TIQNYLADQIQVPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.5.1 (90.2%) 1.3.5.4 (9.8%)" "succinate dehydrogenase (90.2%) Transferred entry: 1.3.5.1 (9.8%)" GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (10.6%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (10.6%)" "IPR003953 (14.5%) IPR015939 (14.5%) IPR030664 (14.5%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.5%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.5%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (14.5%)" DSMKDYLNTALESCFSMAGMEVTR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25.3%) GO:0005829 (25.3%) "GO:0070573 (25.3%) GO:0046872 (24.2%)" proteolysis (25.3%) cytosol (25.3%) "metallodipeptidase activity (25.3%) metal ion binding (24.2%)" "IPR001160 (25.6%) IPR002933 (25.6%) IPR011650 (24.4%)" "Peptidase M20C, Xaa-His dipeptidase (25.6%) Peptidase M20 (25.6%) Peptidase M20, dimerisation domain (24.4%)" EELIGVNAGIVK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25.8%) GO:0006099 (23%) GO:0019752 (0.1%)" GO:0005737 (0.1%) "GO:0004459 (25.8%) GO:0030060 (25%) GO:0016491 (0.1%)" "lactate metabolic process (25.8%) tricarboxylic acid cycle (23%) carboxylic acid metabolic process (0.1%)" cytoplasm (0.1%) "L-lactate dehydrogenase (NAD+) activity (25.8%) L-malate dehydrogenase (NAD+) activity (25%) oxidoreductase activity (0.1%)" "IPR001236 (16.8%) IPR022383 (16.8%) IPR015955 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.8%) Lactate/malate dehydrogenase, C-terminal (16.8%) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (16.7%)" AMTQEFIDDFLGYFMDPTNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.3.1 (57.9%) 6.4.1.1 (31.6%) 4.1.1.3 (5.3%)" "methylmalonyl-CoA carboxytransferase (57.9%) pyruvate carboxylase (31.6%) Transferred entry: 4.1.1.112 and 7.2.4.2 (5.3%)" GO:0006094 (6.4%) GO:0005737 (6.4%) "GO:0003824 (62.9%) GO:0004736 (10%) GO:0047154 (10%)" gluconeogenesis (6.4%) cytoplasm (6.4%) "catalytic activity (62.9%) pyruvate carboxylase activity (10%) methylmalonyl-CoA carboxytransferase activity (10%)" "IPR013785 (24.5%) IPR000891 (24.3%) IPR003379 (24.3%)" "Aldolase-type TIM barrel (24.5%) Pyruvate carboxyltransferase (24.3%) Carboxylase, conserved domain (24.3%)" YQGEYVAGLAVK Bacteria Bacteria "1.6.5.2 (99.8%) 1.-.-.- (0.2%)" "NAD(P)H dehydrogenase (quinone) (99.8%) Oxidoreductases (0.2%)" GO:0006979 (0%) "GO:0016020 (16.3%) GO:0005829 (0%) GO:0032991 (0%)" "GO:0010181 (16.2%) GO:0050660 (15.7%) GO:0050661 (15.7%)" response to oxidative stress (0%) "membrane (16.3%) cytosol (0%) protein-containing complex (0%)" "FMN binding (16.2%) flavin adenine dinucleotide binding (15.7%) NADP binding (15.7%)" "IPR029039 (20.3%) IPR010089 (20.1%) IPR008254 (20.1%)" "Flavoprotein-like superfamily (20.3%) Flavoprotein WrbA-like (20.1%) Flavodoxin/nitric oxide synthase (20.1%)" ILDKAGVDRDVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (16.7%) "GO:0005829 (16.7%) GO:0015935 (16.7%)" "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "cytosol (16.7%) small ribosomal subunit (16.7%)" "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR001892 (20%) IPR010979 (20%) IPR018269 (20%)" "Small ribosomal subunit protein uS13 (20%) Small ribosomal subunit protein uS13-like, H2TH (20%) Small ribosomal subunit protein uS13, conserved site (20%)" EMEKETPEAAPVQEKEEDDVFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (24.7%) "GO:0003743 (25.9%) GO:0003924 (24.7%) GO:0005525 (24.7%)" cytoplasm (24.7%) "translation initiation factor activity (25.9%) GTPase activity (24.7%) GTP binding (24.7%)" "IPR000178 (9.1%) IPR000795 (9.1%) IPR005225 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translational (tr)-type GTP-binding domain (9.1%) Small GTP-binding domain (9.1%)" SGSINISHGAPNYIYSGGNNGMLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.9%) IPR012944 (33.9%) IPR033985 (32.1%)" "Tetratricopeptide-like helical domain superfamily (33.9%) RagB/SusD domain (33.9%) SusD-like, N-terminal (32.1%)" VVPVQYPLATGPNFNSLIDVLLMK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (24.9%) "GO:0003746 (25.3%) GO:0003924 (24.9%) GO:0005525 (24.9%)" ribosome disassembly (24.9%) "translation elongation factor activity (25.3%) GTPase activity (24.9%) GTP binding (24.9%)" "IPR000795 (7.6%) IPR005225 (7.6%) IPR027417 (7.6%)" "Translational (tr)-type GTP-binding domain (7.6%) Small GTP-binding domain (7.6%) P-loop containing nucleoside triphosphate hydrolase (7.6%)" KDGEFAAIIALK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (48.4%) GO:0003746 (51.6%) cytoplasm (48.4%) translation elongation factor activity (51.6%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" VSGGLDAQLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (42.9%) IPR019734 (42.9%) IPR013105 (14.3%)" "Tetratricopeptide-like helical domain superfamily (42.9%) Tetratricopeptide repeat (42.9%) Tetratricopeptide repeat 2 (14.3%)" AAVLVEDPLFLACLMIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0008959 (55.6%) GO:0016407 (44.4%)" "phosphate acetyltransferase activity (55.6%) acetyltransferase activity (44.4%)" "IPR002505 (16.7%) IPR004614 (16.7%) IPR012147 (16.7%)" "Phosphate acetyl/butaryl transferase (16.7%) Phosphate acetyltransferase (16.7%) Phosphate acetyl/butyryltransferase (16.7%)" NNEAMLYECSGNVIALNNPKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.13 (100%) mannose-1-phosphate guanylyltransferase (100%) GO:0009298 (31.8%) "GO:0004475 (31.8%) GO:0005525 (31.8%) GO:0016853 (4.5%)" GDP-mannose biosynthetic process (31.8%) "mannose-1-phosphate guanylyltransferase (GTP) activity (31.8%) GTP binding (31.8%) isomerase activity (4.5%)" "IPR005835 (25%) IPR029044 (25%) IPR049577 (25%)" "Nucleotidyl transferase domain (25%) Nucleotide-diphospho-sugar transferases (25%) GDP-mannose pyrophosphorylase, N-terminal domain (25%)" RIINEPTAAALAYGLDK root "3.6.4.10 (88.4%) 3.6.1.3 (3.7%) 1.3.1.74 (2.6%)" "non-chaperonin molecular chaperone ATPase (88.4%) Deleted entry (3.7%) 2-alkenal reductase [NAD(P)(+)] (2.6%)" "GO:0006950 (4.6%) GO:0009408 (1.4%) GO:0042026 (1%)" "GO:0005788 (4.4%) GO:0005737 (3.2%) GO:0005634 (1%)" "GO:0005524 (28.4%) GO:0140662 (28.4%) GO:0051082 (9.4%)" "response to stress (4.6%) response to heat (1.4%) protein refolding (1%)" "endoplasmic reticulum lumen (4.4%) cytoplasm (3.2%) nucleus (1%)" "ATP binding (28.4%) ATP-dependent protein folding chaperone (28.4%) unfolded protein binding (9.4%)" "IPR013126 (19.1%) IPR018181 (19%) IPR043129 (19%)" "Heat shock protein 70 family (19.1%) Heat shock protein 70, conserved site (19%) ATPase, nucleotide binding domain (19%)" GCAIDIGTVIDNDNCTSK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0005829 (100%) cytosol (100%) "IPR005272 (50%) IPR035571 (50%)" "Protein of unknown function DUF406 (50%) UPF0234-like, C-terminal (50%)" SIEPLKVALQDAGLSVSDINDVILVGGQTR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006260 (0.1%) GO:0042026 (0%) GO:0051085 (0%)" GO:0005829 (0%) "GO:0005524 (25.5%) GO:0140662 (25.5%) GO:0051082 (24.5%)" "DNA replication (0.1%) protein refolding (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" cytosol (0%) "ATP binding (25.5%) ATP-dependent protein folding chaperone (25.5%) unfolded protein binding (24.5%)" "IPR013126 (16.9%) IPR018181 (16.9%) IPR043129 (16.8%)" "Heat shock protein 70 family (16.9%) Heat shock protein 70, conserved site (16.9%) ATPase, nucleotide binding domain (16.8%)" GSPTIEYTQSPGASK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR021255 (100%) Putative auto-transporter adhesin, head GIN domain (100%) LAGLYPAAALMEIMSEDGTMAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.5.4.25 (50%) 4.1.99.12 (50%)" "GTP cyclohydrolase II (50%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (50%)" GO:0009231 (12.5%) GO:0005829 (12.5%) "GO:0000287 (12.5%) GO:0003935 (12.5%) GO:0005525 (12.5%)" riboflavin biosynthetic process (12.5%) cytosol (12.5%) "magnesium ion binding (12.5%) GTP cyclohydrolase II activity (12.5%) GTP binding (12.5%)" "IPR000422 (16.7%) IPR000926 (16.7%) IPR016299 (16.7%)" "3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB (16.7%) GTP cyclohydrolase II, RibA (16.7%) Riboflavin biosynthesis protein RibBA (16.7%)" VQEVPQSETTPFYPR root 4.2.1.47 (100%) GDP-mannose 4,6-dehydratase (100%) GO:0042351 (35.5%) "GO:0008446 (35.5%) GO:0070401 (28.8%) GO:0016829 (0.2%)" 'de novo' GDP-L-fucose biosynthetic process (35.5%) "GDP-mannose 4,6-dehydratase activity (35.5%) NADP+ binding (28.8%) lyase activity (0.2%)" "IPR006368 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "GDP-mannose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" ASMHCSANTDKEGK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.9%) GO:0005829 (17.9%) "GO:0004612 (17.9%) GO:0005524 (17.9%) GO:0046872 (17.3%)" gluconeogenesis (17.9%) cytosol (17.9%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.9%) ATP binding (17.9%) metal ion binding (17.3%)" "IPR001272 (25.2%) IPR013035 (25.2%) IPR008210 (24.8%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.2%) Phosphoenolpyruvate carboxykinase, C-terminal (25.2%) Phosphoenolpyruvate carboxykinase, N-terminal (24.8%)" DRFFLDPGHMSPMLYSVLAFTGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.2.1.1 (95.7%) 2.2.1.- (4.3%)" "transketolase (95.7%) Transketolases and transaldolases (4.3%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" FYEFGNCYDYNIDNKKEDETLAQFSEDYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0009328 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) phenylalanine-tRNA ligase complex (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002547 (7.7%) IPR004532 (7.7%) IPR005121 (7.7%)" "tRNA-binding domain (7.7%) Phenylalanine-tRNA ligase, class IIc, beta subunit, bacterial type (7.7%) Ferrodoxin-fold anticodon-binding domain (7.7%)" GACGGCFNKIPPQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" AIYNYGIGGNEVKVDANESIAEIPSNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales AMAELGVAPHDTAVISGIGCSSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.3 (66.7%) 1.2.-.- (33.3%)" "2-oxoglutarate synthase (66.7%) Acting on the aldehyde or oxo group of donors (33.3%)" GO:0044281 (32.4%) "GO:0030976 (33.8%) GO:0016625 (30.9%) GO:0047553 (2.9%)" small molecule metabolic process (32.4%) "thiamine pyrophosphate binding (33.8%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (30.9%) 2-oxoglutarate synthase activity (2.9%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" DATKGSIIGMK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" TFTEKPNIELAK Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.7.7.13 (99.3%) 2.7.7.22 (0.7%)" "mannose-1-phosphate guanylyltransferase (99.3%) mannose-1-phosphate guanylyltransferase (GDP) (0.7%)" GO:0009298 (33.2%) "GO:0004475 (33.2%) GO:0005525 (32.3%) GO:0016853 (1.1%)" GDP-mannose biosynthetic process (33.2%) "mannose-1-phosphate guanylyltransferase (GTP) activity (33.2%) GTP binding (32.3%) isomerase activity (1.1%)" "IPR005835 (20.7%) IPR029044 (20.7%) IPR051161 (20.7%)" "Nucleotidyl transferase domain (20.7%) Nucleotide-diphospho-sugar transferases (20.7%) Mannose-6-phosphate isomerase type 2 (20.7%)" SVGVESFQDEAGNIIYRKPATPGMENR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" NALTDAEGDFDKAMK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" VNFDQLLEAGVHFGHLKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" ELADLIVEIKREEEMPIGYCFSYPTESIPGGDAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0001678 (12.7%) GO:0006006 (12.7%) GO:0006096 (12.7%)" GO:0005829 (11%) "GO:0004340 (12.7%) GO:0005524 (12.7%) GO:0005536 (12.7%)" "intracellular glucose homeostasis (12.7%) glucose metabolic process (12.7%) glycolytic process (12.7%)" cytosol (11%) "glucokinase activity (12.7%) ATP binding (12.7%) D-glucose binding (12.7%)" "IPR001312 (25%) IPR022672 (25%) IPR022673 (25%)" "Hexokinase (25%) Hexokinase, N-terminal (25%) Hexokinase, C-terminal (25%)" GVENTSGPLGQGHTYAVGAAIAAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "2.2.1.1 (96.2%) 2.2.1.- (3.8%)" "transketolase (96.2%) Transketolases and transaldolases (3.8%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (13.3%) IPR029061 (13.3%) IPR033247 (13.3%)" "Transketolase, N-terminal (13.3%) Thiamin diphosphate-binding fold (13.3%) Transketolase family (13.3%)" IIIEAEGVPYEVAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) GO:0022625 (20%) "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) cytosolic large ribosomal subunit (20%) "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000114 (20%) IPR016180 (20%) IPR020798 (20%)" "Large ribosomal subunit protein uL16, bacteria (20%) Large ribosomal subunit protein uL16 domain (20%) Large ribosomal subunit protein uL16, conserved site (20%)" TVTLPDELIGLVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006207 (21.2%) GO:0006221 (21.2%)" GO:0009347 (21.2%) "GO:0046872 (21.2%) GO:0016740 (15.2%)" "'de novo' pyrimidine nucleobase biosynthetic process (21.2%) pyrimidine nucleotide biosynthetic process (21.2%)" aspartate carbamoyltransferase complex (21.2%) "metal ion binding (21.2%) transferase activity (15.2%)" "IPR002801 (20%) IPR020542 (20%) IPR020545 (20%)" "Aspartate transcarbamylase regulatory subunit (20%) Aspartate carbamoyltransferase regulatory subunit, C-terminal (20%) Aspartate carbamoyltransferase regulatory subunit, N-terminal (20%)" TEMNATEATEKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (25%) GO:0005829 (25%) "GO:0004819 (25%) GO:0005524 (25%)" glutaminyl-tRNA aminoacylation (25%) cytosol (25%) "glutamine-tRNA ligase activity (25%) ATP binding (25%)" "IPR001412 (10.2%) IPR004514 (10.2%) IPR020058 (10.2%)" "Aminoacyl-tRNA synthetase, class I, conserved site (10.2%) Glutamine-tRNA synthetase (10.2%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (10.2%)" VNSDVLTVSTVNSQDQVTQKPLR Bacteria Bacteria "GO:0045893 (30.8%) GO:0006355 (0.4%) GO:0006351 (0.1%)" "GO:0000786 (0.1%) GO:0005829 (0.1%) GO:0009295 (0.1%)" "GO:0043565 (33.9%) GO:0003700 (33%) GO:0003677 (0.5%)" "positive regulation of DNA-templated transcription (30.8%) regulation of DNA-templated transcription (0.4%) DNA-templated transcription (0.1%)" "nucleosome (0.1%) cytosol (0.1%) nucleoid (0.1%)" "sequence-specific DNA binding (33.9%) DNA-binding transcription factor activity (33%) DNA binding (0.5%)" "IPR005412 (25.1%) IPR050207 (25.1%) IPR009057 (25%)" "DNA-binding protein Fis (25.1%) Transcriptional regulatory Fis (25.1%) Homedomain-like superfamily (25%)" IGADDYITKPFSMEELTFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006355 (20%) GO:0000160 (0.2%)" "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" "regulation of DNA-templated transcription (20%) phosphorelay signal transduction system (0.2%)" "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (17.3%) IPR011006 (17.3%) IPR039420 (17.3%)" "Signal transduction response regulator, receiver domain (17.3%) CheY-like superfamily (17.3%) Transcriptional regulatory protein WalR-like (17.3%)" ITNAGVMESHPHDVTITSESPNYSRPE Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (20.5%) GO:0006177 (20.2%)" "GO:0003938 (20.5%) GO:0046872 (20.2%) GO:0000166 (18.5%)" "GTP biosynthetic process (20.5%) GMP biosynthetic process (20.2%)" "IMP dehydrogenase activity (20.5%) metal ion binding (20.2%) nucleotide binding (18.5%)" "IPR001093 (17%) IPR005990 (17%) IPR013785 (17%)" "IMP dehydrogenase/GMP reductase (17%) Inosine-5'-monophosphate dehydrogenase (17%) Aldolase-type TIM barrel (17%)" VHDEHNEAHIGDLVSIMETRPLSK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0006412 (25%) GO:0022627 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000266 (25%) IPR012340 (25%) IPR019979 (25%)" "Small ribosomal subunit protein uS17 (25%) Nucleic acid-binding, OB-fold (25%) Small ribosomal subunit protein uS17, conserved site (25%)" LQRPVAFSIMGLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.1.3.- (50%) 5.1.3.23 (33.3%) 5.1.3.14 (16.7%)" "Acting on carbohydrates and derivatives (50%) UDP-2,3-diacetamido-2,3-dideoxyglucuronic acid 2-epimerase (33.3%) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) (16.7%)" "GO:0016853 (88.9%) GO:0008761 (11.1%)" "isomerase activity (88.9%) UDP-N-acetylglucosamine 2-epimerase activity (11.1%)" "IPR003331 (50%) IPR029767 (50%)" "UDP-N-acetylglucosamine 2-epimerase domain (50%) UDP-N-acetylglucosamine 2-epimerase WecB-like (50%)" SRYDINGKQDNEGYSLYWMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) AKLENFIVDLVGDNHKNVTWSFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) SIMQTYGAQVTPSPSMSTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.20 (100%) tryptophan synthase (100%) GO:0005737 (25%) "GO:0004834 (25%) GO:0030170 (25%) GO:0052684 (25%)" cytoplasm (25%) "tryptophan synthase activity (25%) pyridoxal phosphate binding (25%) L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity (25%)" "IPR001926 (20%) IPR006316 (20%) IPR006653 (20%)" "Tryptophan synthase beta chain-like, PALP domain (20%) Tryptophan synthase, beta chain-like (20%) Tryptophan synthase, beta chain, conserved site (20%)" VIAPAILGMSALNQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (17.1%) "GO:0000015 (17.1%) GO:0005576 (17.1%) GO:0009986 (14.7%)" "GO:0000287 (17.1%) GO:0004634 (17.1%)" glycolytic process (17.1%) "phosphopyruvate hydratase complex (17.1%) extracellular region (17.1%) cell surface (14.7%)" "magnesium ion binding (17.1%) phosphopyruvate hydratase activity (17.1%)" "IPR000941 (17.5%) IPR020811 (17.5%) IPR029017 (17.5%)" "Enolase (17.5%) Enolase, N-terminal (17.5%) Enolase-like, N-terminal (17.5%)" KIGFEGGQMPIQR root GO:0006412 (25.2%) "GO:0022625 (25.2%) GO:0005840 (0%)" "GO:0003735 (25.2%) GO:0019843 (24.3%)" translation (25.2%) "cytosolic large ribosomal subunit (25.2%) ribosome (0%)" "structural constituent of ribosome (25.2%) rRNA binding (24.3%)" "IPR005749 (20.4%) IPR030878 (20.3%) IPR021131 (20.3%)" "Large ribosomal subunit protein uL15, bacteria (20.4%) Large ribosomal subunit protein uL15 (20.3%) Large ribosomal subunit protein uL15/eL18 (20.3%)" IFNQSLKQDFGIVKPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.262 (100%) 4-hydroxythreonine-4-phosphate dehydrogenase (100%) "GO:0046872 (33.3%) GO:0051287 (33.3%) GO:0016491 (22.2%)" "metal ion binding (33.3%) NAD binding (33.3%) oxidoreductase activity (22.2%)" IPR005255 (100%) PdxA family (100%) IDEDFPQILQDLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" KYIEEGKDLQGK Bacillota Bacteria Bacillati Bacillota "4.1.2.13 (97.6%) 4.1.2.29 (2.4%)" "fructose-bisphosphate aldolase (97.6%) 5-dehydro-2-deoxyphosphogluconate aldolase (2.4%)" "GO:0006096 (24.8%) GO:0030388 (24.8%)" "GO:0004332 (24.8%) GO:0008270 (24.8%) GO:0047441 (0.7%)" "glycolytic process (24.8%) fructose 1,6-bisphosphate metabolic process (24.8%)" "fructose-bisphosphate aldolase activity (24.8%) zinc ion binding (24.8%) 5-dehydro-2-deoxyphosphogluconate aldolase activity (0.7%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" HWYLPLDKHEGWLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.9%) GO:0005829 (16.9%) "GO:0004825 (16.9%) GO:0005524 (16.9%) GO:0000049 (16.2%)" methionyl-tRNA aminoacylation (16.9%) cytosol (16.9%) "methionine-tRNA ligase activity (16.9%) ATP binding (16.9%) tRNA binding (16.2%)" "IPR015413 (8.5%) IPR023458 (8.5%) IPR001412 (8.5%)" "Methionyl/Leucyl tRNA synthetase (8.5%) Methionine-tRNA ligase, type 1 (8.5%) Aminoacyl-tRNA synthetase, class I, conserved site (8.5%)" DGVASLDGYNPRPGDEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (14.3%) IPR036942 (14.3%) IPR008969 (11.9%)" "TonB-dependent receptor-like, beta-barrel (14.3%) TonB-dependent receptor-like, beta-barrel domain superfamily (14.3%) Carboxypeptidase-like, regulatory domain superfamily (11.9%)" IWLAPDGEYTNPAANSIVVDYGVKNPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.177 (100%) alpha-D-xyloside xylohydrolase (100%) GO:0005975 (33.3%) "GO:0030246 (33.3%) GO:0004553 (29.4%) GO:0061634 (3.9%)" carbohydrate metabolic process (33.3%) "carbohydrate binding (33.3%) hydrolase activity, hydrolyzing O-glycosyl compounds (29.4%) alpha-D-xyloside xylohydrolase (3.9%)" "IPR000322 (12.5%) IPR011013 (12.5%) IPR013780 (12.5%)" "Glycoside hydrolase family 31, TIM barrel domain (12.5%) Galactose mutarotase-like domain superfamily (12.5%) Glycosyl hydrolase, all-beta (12.5%)" TGVGGGVMGVLPGVFGVSAFAPPLDGSGNSVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" ISNVDPQHFDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR032286 (100%) Protein of unknown function DUF4837 (100%) KGIGVEELLEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (24.7%) "GO:0003743 (24.7%) GO:0003924 (24.7%) GO:0005525 (24.7%)" cytoplasm (24.7%) "translation initiation factor activity (24.7%) GTPase activity (24.7%) GTP binding (24.7%)" "IPR000178 (8.5%) IPR000795 (8.5%) IPR005225 (8.5%)" "Translation initiation factor IF-2, bacterial-like (8.5%) Translational (tr)-type GTP-binding domain (8.5%) Small GTP-binding domain (8.5%)" MGSNKKPFYR Bacillota Bacteria Bacillati Bacillota GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" ISNMHFDTTR root 4.1.99.1 (100%) tryptophanase (100%) "GO:0006520 (10.1%) GO:0009072 (2.9%)" "GO:0009034 (72.5%) GO:0016829 (10.1%) GO:0016830 (2.9%)" "amino acid metabolic process (10.1%) aromatic amino acid metabolic process (2.9%)" "tryptophanase activity (72.5%) lyase activity (10.1%) carbon-carbon lyase activity (2.9%)" "IPR001597 (16.1%) IPR015424 (15.8%) IPR015421 (15.6%)" "Aromatic amino acid beta-eliminating lyase/threonine aldolase (16.1%) Pyridoxal phosphate-dependent transferase (15.8%) Pyridoxal phosphate-dependent transferase, major domain (15.6%)" TTADQMYTNNYVRPQENGHR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.3%) IPR011013 (7.3%) IPR014718 (7.3%)" "Beta galactosidase small chain/ domain 5 (7.3%) Galactose mutarotase-like domain superfamily (7.3%) Glycoside hydrolase-type carbohydrate-binding (7.3%)" TILWNGPAGVFEFDNFTAGSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" LVTFLQKPAAEFTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" IHVAVAQEVPGTGVDTPEDLER root 2.7.7.38 (100%) 3-deoxy-manno-octulosonate cytidylyltransferase (100%) "GO:0009103 (20.2%) GO:0033468 (18.9%) GO:0044281 (1.2%)" "GO:0005829 (20.6%) GO:0016020 (17.1%)" "GO:0008690 (20.8%) GO:0016779 (0.6%) GO:0000287 (0.2%)" "lipopolysaccharide biosynthetic process (20.2%) CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process (18.9%) small molecule metabolic process (1.2%)" "cytosol (20.6%) membrane (17.1%)" "3-deoxy-manno-octulosonate cytidylyltransferase activity (20.8%) nucleotidyltransferase activity (0.6%) magnesium ion binding (0.2%)" "IPR029044 (33.8%) IPR003329 (33.5%) IPR004528 (32.6%)" "Nucleotide-diphospho-sugar transferases (33.8%) Acylneuraminate cytidylyltransferase (33.5%) 3-deoxy-D-manno-octulosonate cytidylyltransferase (32.6%)" TREDHPQVMNAAVR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (30.4%) GO:1902600 (30.4%) GO:0006811 (1.4%)" "GO:0005524 (31.3%) GO:0016787 (6.5%)" "ATP metabolic process (30.4%) proton transmembrane transport (30.4%) monoatomic ion transport (1.4%)" "ATP binding (31.3%) hydrolase activity (6.5%)" "IPR022879 (20.3%) IPR055190 (20.3%) IPR000194 (20%)" "V-type ATP synthase regulatory subunit B/beta (20.3%) ATP synthase A/B type, C-terminal domain (20.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20%)" AEMGLHDEDISKEEILK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25.1%) GO:0005737 (24.7%) "GO:0004639 (25.1%) GO:0005524 (25.1%)" 'de novo' IMP biosynthetic process (25.1%) cytoplasm (24.7%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25.1%) ATP binding (25.1%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" TKEQVILNTWYGGEMKK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.3%) GO:0005829 (17.3%) "GO:0004612 (17.3%) GO:0005524 (17.3%) GO:0046872 (17.1%)" gluconeogenesis (17.3%) cytosol (17.3%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.3%) ATP binding (17.3%) metal ion binding (17.1%)" "IPR001272 (25.2%) IPR008210 (25.2%) IPR013035 (24.8%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.2%) Phosphoenolpyruvate carboxykinase, N-terminal (25.2%) Phosphoenolpyruvate carboxykinase, C-terminal (24.8%)" KWDLGDILGAK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.4%) GO:0006418 (0%)" "GO:0005829 (14.4%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0000049 (14.4%) GO:0004824 (14.4%) GO:0005524 (14.4%)" "lysyl-tRNA aminoacylation (14.4%) tRNA aminoacylation for protein translation (0%)" "cytosol (14.4%) cytoplasm (0%) membrane (0%)" "tRNA binding (14.4%) lysine-tRNA ligase activity (14.4%) ATP binding (14.4%)" "IPR004365 (11.3%) IPR044136 (11.3%) IPR012340 (11.3%)" "OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.3%) Lysine-tRNA ligase, class II, N-terminal (11.3%) Nucleic acid-binding, OB-fold (11.3%)" KVLESAIANAEHNDGADIDDLKVTK root "GO:0006412 (24.7%) GO:0002181 (0.1%) GO:0042255 (0%)" "GO:0022625 (24.7%) GO:0005840 (0.5%) GO:0015934 (0.1%)" "GO:0003735 (24.8%) GO:0019843 (24.7%) GO:0016740 (0%)" "translation (24.7%) cytoplasmic translation (0.1%) ribosome assembly (0%)" "cytosolic large ribosomal subunit (24.7%) ribosome (0.5%) large ribosomal subunit (0.1%)" "structural constituent of ribosome (24.8%) rRNA binding (24.7%) transferase activity (0%)" "IPR001063 (19.8%) IPR005727 (19.8%) IPR036394 (19.8%)" "Large ribosomal subunit protein uL22 (19.8%) Large ribosomal subunit protein uL22, bacterial/chloroplast-type (19.8%) Ribosomal protein uL22 superfamily (19.8%)" MKDQNLFAHVNLVKGER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" ELEKLENSLGGIK root "GO:0006412 (32.9%) GO:0000028 (0.2%) GO:0002181 (0.1%)" "GO:0022627 (32.9%) GO:0005840 (0.7%) GO:0005737 (0.1%)" "GO:0003735 (33%) GO:0008270 (0.1%)" "translation (32.9%) ribosomal small subunit assembly (0.2%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (32.9%) ribosome (0.7%) cytoplasm (0.1%)" "structural constituent of ribosome (33%) zinc ion binding (0.1%)" "IPR001865 (25%) IPR005706 (25%) IPR023591 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25%)" ANATAPAINVIETDKAYK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" SVVSYGGVQAGYLEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0017038 (50%) GO:0005886 (50%) protein import (50%) plasma membrane (50%) "IPR002898 (50%) IPR050790 (50%)" "MotA/TolQ/ExbB proton channel (50%) ExbB/TolQ Biopolymer Transport (50%)" AYAGICYQNLGKYEEAIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016020 (100%) membrane (100%) "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" AMTYHLDVVSAEQQMFSGLVEK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0015986 (0.3%) GO:0042777 (0.1%)" "GO:0045259 (24%) GO:0005886 (23.8%)" "GO:0046933 (23.8%) GO:0005524 (23.6%) GO:0016787 (4.5%)" "proton motive force-driven ATP synthesis (0.3%) proton motive force-driven plasma membrane ATP synthesis (0.1%)" "proton-transporting ATP synthase complex (24%) plasma membrane (23.8%)" "proton-transporting ATP synthase activity, rotational mechanism (23.8%) ATP binding (23.6%) hydrolase activity (4.5%)" "IPR020546 (20.2%) IPR036771 (20.2%) IPR001469 (20.1%)" "ATP synthase, F1 complex, delta/epsilon subunit, N-terminal (20.2%) F0F1 ATP synthase delta/epsilon subunit, N-terminal (20.2%) ATP synthase, F1 complex, delta/epsilon subunit (20.1%)" VNLIGEHTDYNDGFVLPCAIDYQTVISCAPR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.7.1.6 (100%) galactokinase (100%) "GO:0006012 (20.1%) GO:0033499 (0%)" "GO:0005829 (20.1%) GO:0005737 (0%)" "GO:0004335 (20.1%) GO:0005524 (20.1%) GO:0000287 (19.2%)" "galactose metabolic process (20.1%) galactose catabolic process via UDP-galactose, Leloir pathway (0%)" "cytosol (20.1%) cytoplasm (0%)" "galactokinase activity (20.1%) ATP binding (20.1%) magnesium ion binding (19.2%)" "IPR014721 (9.2%) IPR019539 (9.2%) IPR020568 (9.2%)" "Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (9.2%) Galactokinase, N-terminal domain (9.2%) Ribosomal protein uS5 domain 2-type superfamily (9.2%)" MAAGMKDTVVLAISK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" GEGLVLQDNPAEKNYPMPLFLAGKDPVYVGR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) GO:0016491 (100%) oxidoreductase activity (100%) "IPR000534 (20%) IPR005986 (20%) IPR012080 (20%)" "Semialdehyde dehydrogenase, NAD-binding (20%) Aspartate-semialdehyde dehydrogenase, beta-type (20%) Aspartate-semialdehyde dehydrogenase (20%)" QEPSAEAAVGLGKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (43.5%) IPR019734 (43.5%) IPR013105 (13%)" "Tetratricopeptide-like helical domain superfamily (43.5%) Tetratricopeptide repeat (43.5%) Tetratricopeptide repeat 2 (13%)" ELGCAKPEIVLHLDHGDTFETCK Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (25%) GO:0030388 (25%)" "GO:0004332 (25%) GO:0008270 (25%)" "glycolytic process (25%) fructose 1,6-bisphosphate metabolic process (25%)" "fructose-bisphosphate aldolase activity (25%) zinc ion binding (25%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" VLQVLVKDNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR003256 (17.1%) IPR005824 (17.1%) IPR008991 (17.1%)" "Large ribosomal subunit protein uL24 (17.1%) KOW (17.1%) Translation protein SH3-like domain superfamily (17.1%)" NIPAESIVSKDVYDAAVQGDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (75%) GO:0004340 (25%)" "kinase activity (75%) glucokinase activity (25%)" "IPR000600 (33.3%) IPR043129 (33.3%) IPR049874 (33.3%)" "ROK family (33.3%) ATPase, nucleotide binding domain (33.3%) ROK, conserved site (33.3%)" IVLLQGESHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0034599 (33.3%) GO:0005737 (33.3%) GO:0016491 (33.3%) cellular response to oxidative stress (33.3%) cytoplasm (33.3%) oxidoreductase activity (33.3%) "IPR000415 (33.3%) IPR029479 (33.3%) IPR033877 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase Frm2/Hbn1-like (33.3%)" QILVQENDYVR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) GO:0000428 (17%) "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (15.8%)" DNA-templated transcription (16.9%) DNA-directed RNA polymerase complex (17%) "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (15.8%)" "IPR007081 (9.3%) IPR045867 (9.3%) IPR007083 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.3%) DNA-directed RNA polymerase, subunit beta-prime (9.3%) RNA polymerase Rpb1, domain 4 (9.1%)" EGAFPIHREPPKFDELSTVQEVLFTGIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0005886 (23%) GO:0045259 (23%)" "GO:0005524 (23%) GO:0046933 (23%) GO:0016787 (6.6%)" "plasma membrane (23%) proton-transporting ATP synthase complex (23%)" "ATP binding (23%) proton-transporting ATP synthase activity, rotational mechanism (23%) hydrolase activity (6.6%)" "IPR004100 (10.7%) IPR050053 (10.7%) IPR000194 (9.9%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.7%) ATPase alpha/beta chains (10.7%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (9.9%)" TKNNPILIGEPGVGK root 3.4.21.92 (100%) endopeptidase Clp (100%) "GO:0034605 (19%) GO:0042026 (10.2%) GO:0006508 (5.3%)" "GO:0005737 (18.8%) GO:0009507 (0.2%) GO:0005829 (0.2%)" "GO:0005524 (19.4%) GO:0016887 (19.3%) GO:0008233 (5.3%)" "cellular response to heat (19%) protein refolding (10.2%) proteolysis (5.3%)" "cytoplasm (18.8%) chloroplast (0.2%) cytosol (0.2%)" "ATP binding (19.4%) ATP hydrolysis activity (19.3%) peptidase activity (5.3%)" "IPR050130 (8.9%) IPR003959 (8.9%) IPR027417 (8.9%)" "ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.9%) ATPase, AAA-type, core (8.9%) P-loop containing nucleoside triphosphate hydrolase (8.9%)" EGDGLALSSR root "6.3.2.1 (98.8%) 1.4.3.16 (1.2%)" "pantoate--beta-alanine ligase (AMP-forming) (98.8%) L-aspartate oxidase (1.2%)" GO:0015940 (25.4%) GO:0005829 (23.5%) "GO:0004592 (25.4%) GO:0005524 (25.4%) GO:0016874 (0.4%)" pantothenate biosynthetic process (25.4%) cytosol (23.5%) "pantoate-beta-alanine ligase activity (25.4%) ATP binding (25.4%) ligase activity (0.4%)" "IPR003721 (29.9%) IPR014729 (29.9%) IPR042176 (29.9%)" "Pantoate-beta-alanine ligase (29.9%) Rossmann-like alpha/beta/alpha sandwich fold (29.9%) Pantoate-beta-alanine ligase, C-terminal domain (29.9%)" AMTPVAWWMLHEETVYKGGDTVTLNETDLTQIPK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:1990451 (32.5%) GO:0009268 (0.4%) GO:0010447 (0.4%)" "GO:0042597 (33.6%) GO:0030288 (0.4%)" GO:0051082 (32.8%) "cellular stress response to acidic pH (32.5%) response to pH (0.4%) response to acidic pH (0.4%)" "periplasmic space (33.6%) outer membrane-bounded periplasmic space (0.4%)" unfolded protein binding (32.8%) "IPR010486 (33.7%) IPR038303 (33.7%) IPR028623 (32.6%)" "HNS-dependent expression A/B (33.7%) HNS-dependent expression A/B superfamily (33.7%) HNS-dependent expression B (32.6%)" AVPQEHVNELWK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR007139 (100%) Protein of unknown function DUF349 (100%) MQKEHQPYNIQPADR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.6.1.- (100%) Transaminases (100%) "GO:0008483 (50%) GO:0030170 (50%)" "transaminase activity (50%) pyridoxal phosphate binding (50%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" SWDRVNAALENEEIIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.8%) "GO:0022627 (24.4%) GO:0005840 (0.8%) GO:1990904 (0.4%)" "GO:0003729 (24.8%) GO:0003735 (24.8%)" translation (24.8%) "cytosolic small ribosomal subunit (24.4%) ribosome (0.8%) ribonucleoprotein complex (0.4%)" "mRNA binding (24.8%) structural constituent of ribosome (24.8%)" "IPR003029 (24.9%) IPR012340 (24.9%) IPR035104 (24.9%)" "S1 domain (24.9%) Nucleic acid-binding, OB-fold (24.9%) Ribosomal protein S1-like (24.9%)" SAAATEAPAAPAAETTEEAPKAE Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.3%) IPR036373 (33.3%) IPR047859 (33.3%)" "Large ribosomal subunit protein bL17 (33.3%) Large ribosomal subunit protein bL17 superfamily (33.3%) Large ribosomal subunit protein bL17, conserved site (33.3%)" NSCRPSFDICGIWGGYTGEGSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.4.13.- (79.2%) 3.5.1.18 (12.5%) 3.5.1.- (8.3%)" "Dipeptidases (79.2%) succinyl-diaminopimelate desuccinylase (12.5%) In linear amides (8.3%)" "GO:0046872 (49.3%) GO:0016787 (35.3%) GO:0016805 (12.5%)" "metal ion binding (49.3%) hydrolase activity (35.3%) dipeptidase activity (12.5%)" "IPR002933 (33.3%) IPR011650 (33.3%) IPR051458 (33.3%)" "Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%) Cytosolic and Metallo Dipeptidase (33.3%)" INDKHFEIIVR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) GO:0000428 (17%) "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (15.5%)" DNA-templated transcription (17%) DNA-directed RNA polymerase complex (17%) "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (15.5%)" "IPR007081 (9.4%) IPR045867 (9.3%) IPR038120 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.4%) DNA-directed RNA polymerase, subunit beta-prime (9.3%) RNA polymerase Rpb1, funnel domain superfamily (9.1%)" IFFCEDDENLGMLLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" EIANAYSELNDPIDQEER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.7%) "GO:0005829 (16.7%) GO:0005737 (0.1%)" "GO:0000049 (16.7%) GO:0004824 (16.7%) GO:0005524 (16.7%)" lysyl-tRNA aminoacylation (16.7%) "cytosol (16.7%) cytoplasm (0.1%)" "tRNA binding (16.7%) lysine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR004364 (11.9%) IPR006195 (11.9%) IPR002313 (11.8%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (11.9%) Aminoacyl-tRNA synthetase, class II (11.9%) Lysine-tRNA ligase, class II (11.8%)" MITNEHIEQYLAQAHR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.2.17 (100%) L-fuculose-phosphate aldolase (100%) GO:0019323 (33.3%) GO:0005829 (33.3%) "GO:0016832 (29.4%) GO:0008738 (3.9%)" pentose catabolic process (33.3%) cytosol (33.3%) "aldehyde-lyase activity (29.4%) L-fuculose-phosphate aldolase activity (3.9%)" "IPR001303 (33.3%) IPR036409 (33.3%) IPR050197 (33.3%)" "Class II aldolase/adducin N-terminal (33.3%) Class II aldolase/adducin N-terminal domain superfamily (33.3%) Aldolase class II family, sugar metabolism enzymes (33.3%)" MTYTIVSESEANLKEGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006354 (20%) GO:0032784 (20%)" "GO:0003677 (20%) GO:0070063 (20%) GO:0003746 (19.8%)" "DNA-templated transcription elongation (20%) regulation of DNA-templated transcription elongation (20%)" "DNA binding (20%) RNA polymerase binding (20%) translation elongation factor activity (19.8%)" "IPR001437 (13%) IPR006359 (13%) IPR022691 (13%)" "Transcription elongation factor, GreA/GreB, C-terminal (13%) Transcription elongation factor GreA (13%) Transcription elongation factor, GreA/GreB, N-terminal (13%)" RFGFEEVAYLLLSGSLPDKEELASFR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.3.1 (100%) citrate (Si)-synthase (100%) "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (25%) "GO:0036440 (21.7%) GO:0046912 (3.3%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (25%) "citrate synthase activity (21.7%) acyltransferase activity, acyl groups converted into alkyl on transfer (3.3%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" LDEQHVNILGTSAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (13.6%) GO:0006526 (13.6%) GO:0006541 (13.6%)" GO:0005737 (13.6%) "GO:0004088 (13.6%) GO:0005524 (13.6%) GO:0046872 (13.6%)" "pyrimidine nucleotide biosynthetic process (13.6%) L-arginine biosynthetic process (13.6%) glutamine metabolic process (13.6%)" cytoplasm (13.6%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.6%) ATP binding (13.6%) metal ion binding (13.6%)" "IPR005479 (10.1%) IPR005480 (10.1%) IPR005483 (10.1%)" "Carbamoyl phosphate synthase, ATP-binding domain (10.1%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10.1%) Carbamoyl phosphate synthase, CPSase domain (10.1%)" SYLPGYVLVEAALVGEVAHHLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006353 (20%) GO:0006354 (20%) GO:0031564 (20%)" GO:0005829 (20%) "DNA-templated transcription termination (20%) DNA-templated transcription elongation (20%) transcription antitermination (20%)" cytosol (20%) "IPR001062 (12.5%) IPR005824 (12.5%) IPR006645 (12.5%)" "Transcription antitermination protein, NusG (12.5%) KOW (12.5%) NusG-like, N-terminal (12.5%)" SANVIAGEAGGITQHIGAYNVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.3%) IPR000795 (8.3%) IPR004161 (8.3%)" "Translation initiation factor IF-2, bacterial-like (8.3%) Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" AAGVNIFSNSSQPGAYGSR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR012910 (12.8%) IPR023996 (12.8%) IPR023997 (12.8%)" "TonB-dependent receptor, plug domain (12.8%) TonB-dependent outer membrane protein, SusC/RagA (12.8%) TonB-dependent outer membrane protein SusC/RagA, conserved site (12.8%)" GMNVTMEEANAYVQSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" LTDAVEGSPIDAGK root 6.3.3.1 (100%) phosphoribosylformylglycinamidine cyclo-ligase (100%) "GO:0006189 (16.7%) GO:0046084 (16.7%)" GO:0005829 (16.7%) "GO:0004637 (16.7%) GO:0004641 (16.7%) GO:0005524 (16.7%)" "'de novo' IMP biosynthetic process (16.7%) adenine biosynthetic process (16.7%)" cytosol (16.7%) "phosphoribosylamine-glycine ligase activity (16.7%) phosphoribosylformylglycinamidine cyclo-ligase activity (16.7%) ATP binding (16.7%)" "IPR004733 (20.1%) IPR010918 (20.1%) IPR036676 (20.1%)" "Phosphoribosylformylglycinamidine cyclo-ligase (20.1%) PurM-like, C-terminal domain (20.1%) PurM-like, C-terminal domain superfamily (20.1%)" AAEAAYTGSQEPVEEMR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "2.6.1.- (92.9%) 2.6.1.1 (7.1%)" "Transaminases (92.9%) aspartate transaminase (7.1%)" GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" KGGQVVGGAVESNTKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.-.-.- (100%) Translocases (100%) GO:0022900 (25%) GO:0005886 (25%) "GO:0009055 (25%) GO:0010181 (25%)" electron transport chain (25%) plasma membrane (25%) "electron transfer activity (25%) FMN binding (25%)" "IPR007329 (50%) IPR010209 (50%)" "FMN-binding (50%) Ion-translocating oxidoreductase complex, subunit RnfG/RsxG (50%)" QADGSVMLR Pseudomonadati Bacteria Pseudomonadati "2.7.7.8 (99.3%) 5.6.2.2 (0.7%)" "polyribonucleotide nucleotidyltransferase (99.3%) DNA topoisomerase (ATP-hydrolyzing) (0.7%)" "GO:0006402 (14.2%) GO:0006396 (14.1%) GO:0006265 (0.1%)" "GO:0005829 (14.2%) GO:0005694 (0.1%)" "GO:0000175 (14.2%) GO:0003723 (14.2%) GO:0004654 (14.2%)" "mRNA catabolic process (14.2%) RNA processing (14.1%) DNA topological change (0.1%)" "cytosol (14.2%) chromosome (0.1%)" "3'-5'-RNA exonuclease activity (14.2%) RNA binding (14.2%) polyribonucleotide nucleotidyltransferase activity (14.2%)" "IPR020568 (8%) IPR001247 (7.9%) IPR012162 (7.9%)" "Ribosomal protein uS5 domain 2-type superfamily (8%) Exoribonuclease, phosphorolytic domain 1 (7.9%) Polyribonucleotide nucleotidyltransferase (7.9%)" ILVVEVQQHIGEDTVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0045259 (23.1%) GO:0005886 (21.8%)" "GO:0005524 (23.1%) GO:0046933 (23.1%) GO:0016787 (7.7%)" "proton-transporting ATP synthase complex (23.1%) plasma membrane (21.8%)" "ATP binding (23.1%) proton-transporting ATP synthase activity, rotational mechanism (23.1%) hydrolase activity (7.7%)" "IPR004100 (10.5%) IPR050053 (10.5%) IPR000194 (9.9%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.5%) ATPase alpha/beta chains (10.5%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (9.9%)" FTEEELKEIADLAAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (25%) GO:0003863 (8.3%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (25%) branched-chain 2-oxo acid dehydrogenase activity (8.3%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" DLHSGHFGGAVANPINVLCK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.4.13.- (52.9%) 3.5.1.- (17.6%) 3.5.1.18 (17.6%)" "Dipeptidases (52.9%) In linear amides (17.6%) succinyl-diaminopimelate desuccinylase (17.6%)" "GO:0046872 (50%) GO:0016787 (41.9%) GO:0016805 (5.6%)" "metal ion binding (50%) hydrolase activity (41.9%) dipeptidase activity (5.6%)" "IPR002933 (33.3%) IPR011650 (33.3%) IPR051458 (33.3%)" "Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%) Cytosolic and Metallo Dipeptidase (33.3%)" FLNTDKLPFLIKEGVLTDEQLEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis YSGEDATDQKNLQK root 3.6.1.66 (100%) XTP/dITP diphosphatase (100%) "GO:0009117 (11.4%) GO:0009146 (11.4%) GO:0009143 (0.2%)" "GO:0005829 (11.4%) GO:0005840 (0.7%) GO:0005737 (0.1%)" "GO:0000166 (11.4%) GO:0035870 (11.4%) GO:0036222 (11.4%)" "nucleotide metabolic process (11.4%) purine nucleoside triphosphate catabolic process (11.4%) nucleoside triphosphate catabolic process (0.2%)" "cytosol (11.4%) ribosome (0.7%) cytoplasm (0.1%)" "nucleotide binding (11.4%) dITP diphosphatase activity (11.4%) XTP diphosphatase activity (11.4%)" "IPR002637 (33.7%) IPR029001 (33.7%) IPR020922 (32.5%)" "RdgB/HAM1 (33.7%) Inosine triphosphate pyrophosphatase-like (33.7%) dITP/XTP pyrophosphatase (32.5%)" NLYEFLSADYKEPMNAFEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" LLVQPQYSPMPVEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "7.1.2.2 (98.3%) 3.6.3.14 (1.7%)" "H(+)-transporting two-sector ATPase (98.3%) Transferred entry: 7.1.2.2 (1.7%)" "GO:0005886 (17.9%) GO:0045259 (17.9%)" "GO:0005524 (17.9%) GO:0043531 (17.9%) GO:0046933 (17.9%)" "plasma membrane (17.9%) proton-transporting ATP synthase complex (17.9%)" "ATP binding (17.9%) ADP binding (17.9%) proton-transporting ATP synthase activity, rotational mechanism (17.9%)" "IPR000194 (10%) IPR000793 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) ATP synthase, alpha subunit, C-terminal (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" NALFNPEGDTETR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) GO:0009263 (25.4%) GO:0016020 (23.7%) "GO:0046872 (25.4%) GO:0004748 (20.3%) GO:0016491 (5.1%)" deoxyribonucleotide biosynthetic process (25.4%) membrane (23.7%) "metal ion binding (25.4%) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.3%) oxidoreductase activity (5.1%)" "IPR000358 (20%) IPR009078 (20%) IPR012348 (20%)" "Ribonucleotide reductase small subunit family (20%) Ferritin-like superfamily (20%) Ribonucleotide reductase-like (20%)" GIIPASFLPLQSGVGNIANAVLGALGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.8.3.- (80%) 3.1.2.1 (20%)" "CoA-transferases (80%) acetyl-CoA hydrolase (20%)" "GO:0006083 (25.4%) GO:0006084 (23.9%)" "GO:0003986 (25.4%) GO:0008775 (25.4%)" "acetate metabolic process (25.4%) acetyl-CoA metabolic process (23.9%)" "acetyl-CoA hydrolase activity (25.4%) acetate CoA-transferase activity (25.4%)" "IPR026888 (17%) IPR037171 (17%) IPR038460 (17%)" "Acetyl-CoA hydrolase/transferase, C-terminal domain (17%) NagB/RpiA transferase-like (17%) Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily (17%)" VLAEQALAQPTTDELMTLVNK Bacteria Bacteria 2.7.3.9 (100%) phosphoenolpyruvate--protein phosphotransferase (100%) "GO:0009401 (19.8%) GO:0015764 (0.1%)" "GO:0005737 (19.8%) GO:0005829 (0%)" "GO:0008965 (20.3%) GO:0016301 (19.8%) GO:0046872 (19.8%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (19.8%) N-acetylglucosamine transport (0.1%)" "cytoplasm (19.8%) cytosol (0%)" "phosphoenolpyruvate-protein phosphotransferase activity (20.3%) kinase activity (19.8%) metal ion binding (19.8%)" "IPR040442 (8.6%) IPR015813 (8.6%) IPR050499 (8.6%)" "Pyruvate kinase-like domain superfamily (8.6%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (8.6%) Phosphoenolpyruvate-dependent sugar PTS enzyme (8.6%)" CECGEQLHEAMR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.5.4.25 (50%) 4.1.99.12 (50%)" "GTP cyclohydrolase II (50%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (50%)" GO:0009231 (12.5%) GO:0005829 (12.5%) "GO:0000287 (12.5%) GO:0003935 (12.5%) GO:0005525 (12.5%)" riboflavin biosynthetic process (12.5%) cytosol (12.5%) "magnesium ion binding (12.5%) GTP cyclohydrolase II activity (12.5%) GTP binding (12.5%)" "IPR000422 (16.7%) IPR000926 (16.7%) IPR016299 (16.7%)" "3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB (16.7%) GTP cyclohydrolase II, RibA (16.7%) Riboflavin biosynthesis protein RibBA (16.7%)" AYSMANYPAEGDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "7.2.1.1 (98.9%) 1.6.5.- (1.1%)" "NADH:ubiquinone reductase (Na(+)-transporting) (98.9%) With a quinone or similar compound as acceptor (1.1%)" GO:0006814 (16.7%) "GO:0005886 (16.6%) GO:0016020 (0.2%)" "GO:0016655 (16.7%) GO:0051537 (16.7%) GO:0046872 (16.6%)" sodium ion transport (16.7%) "plasma membrane (16.6%) membrane (0.2%)" "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (16.7%) 2 iron, 2 sulfur cluster binding (16.7%) metal ion binding (16.6%)" "IPR008333 (10.2%) IPR010205 (10.2%) IPR017927 (10.2%)" "Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain (10.2%) Na(+)-translocating NADH-quinone reductase subunit F (10.2%) FAD-binding domain, ferredoxin reductase-type (10.2%)" ICREEPDINVVVLTGAGDKAFCSGGDQNVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.3.36 (100%) 1,4-dihydroxy-2-naphthoyl-CoA synthase (100%) GO:0009234 (33.3%) GO:0005829 (33.3%) GO:0008935 (33.3%) menaquinone biosynthetic process (33.3%) cytosol (33.3%) 1,4-dihydroxy-2-naphthoyl-CoA synthase activity (33.3%) "IPR001753 (20%) IPR010198 (20%) IPR014748 (20%)" "Enoyl-CoA hydratase/isomerase (20%) 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB (20%) Enoyl-CoA hydratase, C-terminal (20%)" QVGAVGKPAFVEKVEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" ILQLMNLAPSHIVLPAIHIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (33.3%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (33.3%)" "IPR003741 (12.7%) IPR004452 (12.7%) IPR009051 (12.7%)" "LUD domain (12.7%) L-lactate oxidation iron-sulfur protein LutB/LldF (12.7%) Alpha-helical ferredoxin (12.7%)" EVELTCPFENMGAQLVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.5%) GO:0005737 (15%) "GO:0005524 (17.5%) GO:0016853 (17.5%) GO:0140662 (17.5%)" protein refolding (17.5%) cytoplasm (15%) "ATP binding (17.5%) isomerase activity (17.5%) ATP-dependent protein folding chaperone (17.5%)" "IPR001844 (17.1%) IPR002423 (17.1%) IPR027409 (17.1%)" "Chaperonin Cpn60/GroEL (17.1%) Chaperonin Cpn60/GroEL/TCP-1 family (17.1%) GroEL-like apical domain superfamily (17.1%)" ESLEDKTMNLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR004216 (11.1%) IPR005763 (11.1%) IPR009015 (11.1%)" "L-fucose/L-arabinose isomerase, C-terminal (11.1%) L-fucose isomerase (11.1%) L-fucose isomerase, N-terminal/central domain superfamily (11.1%)" EMFREDEPMPLTSGEFAVLK root "GO:0045893 (19%) GO:0006355 (1.1%) GO:0000160 (0.3%)" "GO:0005829 (19.8%) GO:0032993 (19.8%) GO:0005737 (0%)" "GO:0000976 (19.8%) GO:0000156 (19.8%) GO:0003677 (0.3%)" "positive regulation of DNA-templated transcription (19%) regulation of DNA-templated transcription (1.1%) phosphorelay signal transduction system (0.3%)" "cytosol (19.8%) protein-DNA complex (19.8%) cytoplasm (0%)" "transcription cis-regulatory region binding (19.8%) phosphorelay response regulator activity (19.8%) DNA binding (0.3%)" "IPR001867 (16.8%) IPR016032 (16.8%) IPR036388 (16.8%)" "OmpR/PhoB-type DNA-binding domain (16.8%) Signal transduction response regulator, C-terminal effector (16.8%) Winged helix-like DNA-binding domain superfamily (16.8%)" TFTEKPNLELAK Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.7.7.13 (99.3%) 2.7.7.22 (0.7%)" "mannose-1-phosphate guanylyltransferase (99.3%) mannose-1-phosphate guanylyltransferase (GDP) (0.7%)" GO:0009298 (33.2%) "GO:0004475 (33.2%) GO:0005525 (32.3%) GO:0016853 (1.1%)" GDP-mannose biosynthetic process (33.2%) "mannose-1-phosphate guanylyltransferase (GTP) activity (33.2%) GTP binding (32.3%) isomerase activity (1.1%)" "IPR005835 (20.7%) IPR029044 (20.7%) IPR051161 (20.7%)" "Nucleotidyl transferase domain (20.7%) Nucleotide-diphospho-sugar transferases (20.7%) Mannose-6-phosphate isomerase type 2 (20.7%)" YKEVLADPNEPIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.99.- (96.9%) 5.4.99.22 (3.1%)" "Transferring other groups (96.9%) 23S rRNA pseudouridine(2605) synthase (3.1%)" "GO:0000455 (32%) GO:0001522 (1%) GO:0006364 (1%)" "GO:0003723 (33%) GO:0120159 (32%) GO:0009982 (1%)" "enzyme-directed rRNA pseudouridine synthesis (32%) pseudouridine synthesis (1%) rRNA processing (1%)" "RNA binding (33%) rRNA pseudouridine synthase activity (32%) pseudouridine synthase activity (1%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" MECQMENPYILIYDKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (23%) GO:0005737 (9%) "GO:0005524 (23%) GO:0140662 (23%) GO:0016853 (13%)" protein refolding (23%) cytoplasm (9%) "ATP binding (23%) ATP-dependent protein folding chaperone (23%) isomerase activity (13%)" "IPR001844 (18.7%) IPR002423 (18.7%) IPR027409 (18.7%)" "Chaperonin Cpn60/GroEL (18.7%) Chaperonin Cpn60/GroEL/TCP-1 family (18.7%) GroEL-like apical domain superfamily (18.7%)" AGLHLEAGAKK Bacteria Bacteria "1.2.1.- (78%) 1.2.1.12 (22%)" "With NAD(+) or NADP(+) as acceptor (78%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (22%)" GO:0006006 (25%) "GO:0050661 (25%) GO:0051287 (25%) GO:0016620 (24.2%)" glucose metabolic process (25%) "NADP binding (25%) NAD binding (25%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (24.2%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" NMFALLNKPGYEKESEAIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" MEELKLNTIEEAIADFREGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.5.4.25 (51.4%) 4.1.99.12 (48.6%)" "GTP cyclohydrolase II (51.4%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (48.6%)" GO:0009231 (12.7%) GO:0005829 (12.7%) "GO:0003935 (12.7%) GO:0005525 (12.7%) GO:0008686 (12.7%)" riboflavin biosynthetic process (12.7%) cytosol (12.7%) "GTP cyclohydrolase II activity (12.7%) GTP binding (12.7%) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (12.7%)" "IPR000422 (16.7%) IPR000926 (16.7%) IPR016299 (16.7%)" "3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB (16.7%) GTP cyclohydrolase II, RibA (16.7%) Riboflavin biosynthesis protein RibBA (16.7%)" MGDPETEVVMLR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0009113 (19.9%) GO:0006189 (19.7%) GO:0006164 (0.3%)" "GO:0004637 (19.9%) GO:0005524 (19.9%) GO:0046872 (19.9%)" "purine nucleobase biosynthetic process (19.9%) 'de novo' IMP biosynthetic process (19.7%) purine nucleotide biosynthetic process (0.3%)" "phosphoribosylamine-glycine ligase activity (19.9%) ATP binding (19.9%) metal ion binding (19.9%)" "IPR000115 (11.1%) IPR011054 (11.1%) IPR011761 (11.1%)" "Phosphoribosylglycinamide synthetase (11.1%) Rudiment single hybrid motif (11.1%) ATP-grasp fold (11.1%)" EGKYCVIKLPSGEVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0002181 (19.9%) "GO:0015934 (19.9%) GO:0005840 (0.2%)" "GO:0003735 (19.9%) GO:0016740 (19.9%) GO:0019843 (18.4%)" cytoplasmic translation (19.9%) "large ribosomal subunit (19.9%) ribosome (0.2%)" "structural constituent of ribosome (19.9%) transferase activity (19.9%) rRNA binding (18.4%)" "IPR002171 (11.1%) IPR005880 (11.1%) IPR008991 (11.1%)" "Large ribosomal subunit protein uL2 (11.1%) Large ribosomal subunit protein uL2, bacteria/organella (11.1%) Translation protein SH3-like domain superfamily (11.1%)" NQFDFNDFLSQIHQIKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) GO:0048500 (20%) "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (20%)" SRP-dependent cotranslational protein targeting to membrane (20%) signal recognition particle (20%) "GTPase activity (20%) GTP binding (20%) 7S RNA binding (20%)" "IPR000897 (11.1%) IPR003593 (11.1%) IPR004125 (11.1%)" "Signal recognition particle, SRP54 subunit, GTPase domain (11.1%) AAA+ ATPase domain (11.1%) Signal recognition particle, SRP54 subunit, M-domain (11.1%)" NSPYDPSYYYVSEGMQEPLKYVGDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003755 (100%) peptidyl-prolyl cis-trans isomerase activity (100%) "IPR032252 (50%) IPR046357 (50%)" "Protein of unknown function DUF4827 (50%) Peptidyl-prolyl cis-trans isomerase domain superfamily (50%)" AAIEIMEANPDKLIHR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.103 (50%) 4.2.1.47 (50%)" "L-threonine 3-dehydrogenase (50%) GDP-mannose 4,6-dehydratase (50%)" GO:0006567 (48.5%) "GO:0008743 (48.5%) GO:0016829 (3%)" L-threonine catabolic process (48.5%) "L-threonine 3-dehydrogenase activity (48.5%) lyase activity (3%)" "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" LLLDAMLGDSTLYAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.49 (96.6%) 1.1.1.363 (3.4%)" "glucose-6-phosphate dehydrogenase (NADP(+)) (96.6%) glucose-6-phosphate dehydrogenase [NAD(P)(+)] (3.4%)" "GO:0006006 (20%) GO:0009051 (20%)" GO:0005829 (20%) "GO:0004345 (20%) GO:0050661 (20%)" "glucose metabolic process (20%) pentose-phosphate shunt, oxidative branch (20%)" cytosol (20%) "glucose-6-phosphate dehydrogenase activity (20%) NADP binding (20%)" "IPR001282 (20%) IPR019796 (20%) IPR022674 (20%)" "Glucose-6-phosphate dehydrogenase (20%) Glucose-6-phosphate dehydrogenase, active site (20%) Glucose-6-phosphate dehydrogenase, NAD-binding (20%)" VGTYNYFKDIEKDHLCPCSLLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (11.4%) GO:0005737 (2.9%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (11.4%) cytoplasm (2.9%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" ADLISAVAAEAGLSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0030261 (11.9%) GO:0006270 (10.4%) GO:0006351 (10.4%)" "GO:0005829 (11.9%) GO:1990103 (10.4%) GO:1990178 (10.4%)" "GO:0003677 (11.9%) GO:0030527 (11.9%) GO:0042802 (10.4%)" "chromosome condensation (11.9%) DNA replication initiation (10.4%) DNA-templated transcription (10.4%)" "cytosol (11.9%) DnaA-HU complex (10.4%) HU-DNA complex (10.4%)" "DNA binding (11.9%) structural constituent of chromatin (11.9%) identical protein binding (10.4%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" IYAVTGDSLNEINDAVRK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.2.5.1 (100%) pyruvate dehydrogenase (quinone) (100%) GO:0019752 (25%) "GO:0000287 (25%) GO:0030976 (25%) GO:0003824 (21.9%)" carboxylic acid metabolic process (25%) "magnesium ion binding (25%) thiamine pyrophosphate binding (25%) catalytic activity (21.9%)" "IPR000399 (11.1%) IPR011766 (11.1%) IPR012000 (11.1%)" "TPP-binding enzyme, conserved site (11.1%) Thiamine pyrophosphate enzyme, TPP-binding (11.1%) Thiamine pyrophosphate enzyme, central domain (11.1%)" VVAGVIPDVPFEMLAQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0019698 (36.7%) GO:0042840 (36.7%)" GO:0016746 (26.5%) "D-galacturonate catabolic process (36.7%) D-glucuronate catabolic process (36.7%)" acyltransferase activity (26.5%) MAETPSGMLNAVGLQNK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "1.3.-.- (85.9%) 1.3.1.14 (13.7%) 1.3.98.1 (0.4%)" "Acting on the CH-CH group of donors (85.9%) dihydroorotate dehydrogenase (NAD(+)) (13.7%) dihydroorotate oxidase (fumarate) (0.4%)" "GO:0006207 (24.9%) GO:0044205 (24.9%)" GO:0005737 (24.9%) "GO:0004152 (18%) GO:0004589 (7%) GO:0016491 (0.1%)" "'de novo' pyrimidine nucleobase biosynthetic process (24.9%) 'de novo' UMP biosynthetic process (24.9%)" cytoplasm (24.9%) "dihydroorotate dehydrogenase activity (18%) dihydroorotate dehydrogenase (NAD+) activity (7%) oxidoreductase activity (0.1%)" "IPR001295 (12.6%) IPR005720 (12.6%) IPR013785 (12.6%)" "Dihydroorotate dehydrogenase, conserved site (12.6%) Dihydroorotate dehydrogenase, catalytic (12.6%) Aldolase-type TIM barrel (12.6%)" GIGLTAEEIDKYINQIAFSGANDFLEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (5%) "GO:0005524 (23.1%) GO:0016887 (23.1%) GO:0051082 (23.1%)" cytoplasm (5%) "ATP binding (23.1%) ATP hydrolysis activity (23.1%) unfolded protein binding (23.1%)" "IPR001404 (17.2%) IPR019805 (17.2%) IPR020575 (17.2%)" "Heat shock protein Hsp90 family (17.2%) Heat shock protein Hsp90, conserved site (17.2%) Heat shock protein Hsp90, N-terminal (17.2%)" IAPDVEALAEEYKDQVIIGKCDVDDNDELTGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" VALYGIDYLMKDK root 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (30.3%) GO:0005975 (0.1%) GO:0044814 (0.1%)" "GO:0005829 (32.3%) GO:0005886 (0.1%) GO:0016020 (0.1%)" "GO:0008861 (32.3%) GO:0016829 (4.2%) GO:0016746 (0.2%)" "glucose metabolic process (30.3%) carbohydrate metabolic process (0.1%) pyruvate fermentation via PFL (0.1%)" "cytosol (32.3%) plasma membrane (0.1%) membrane (0.1%)" "formate C-acetyltransferase activity (32.3%) lyase activity (4.2%) acyltransferase activity (0.2%)" "IPR004184 (20.7%) IPR050244 (20.7%) IPR005949 (19.5%)" "Pyruvate formate lyase domain (20.7%) Autonomous Glycyl Radical Cofactor (20.7%) Formate acetyltransferase (19.5%)" VIVATQMLHTMINNPRPTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.40 (100%) pyruvate kinase (100%) "GO:0006950 (11.1%) GO:0006096 (0.1%)" "GO:0005737 (0.1%) GO:0005829 (0.1%)" "GO:0000287 (17.7%) GO:0004743 (17.7%) GO:0016301 (17.7%)" "response to stress (11.1%) glycolytic process (0.1%)" "cytoplasm (0.1%) cytosol (0.1%)" "magnesium ion binding (17.7%) pyruvate kinase activity (17.7%) kinase activity (17.7%)" "IPR001697 (11.2%) IPR015793 (11.2%) IPR015795 (11.2%)" "Pyruvate kinase (11.2%) Pyruvate kinase, barrel (11.2%) Pyruvate kinase, C-terminal (11.2%)" KIPDHLLDDPDPIFAFNK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.1.23 (100%) orotidine-5'-phosphate decarboxylase (100%) "GO:0006207 (32.8%) GO:0044205 (32.8%)" "GO:0004590 (32.8%) GO:0016829 (1.6%)" "'de novo' pyrimidine nucleobase biosynthetic process (32.8%) 'de novo' UMP biosynthetic process (32.8%)" "orotidine-5'-phosphate decarboxylase activity (32.8%) lyase activity (1.6%)" "IPR001754 (25%) IPR011060 (25%) IPR011995 (25%)" "Orotidine 5'-phosphate decarboxylase domain (25%) Ribulose-phosphate binding barrel (25%) Orotidine 5'-phosphate decarboxylase, type 2 (25%)" RKAEQAAAEQALK root "3.1.26.3 (99.9%) 3.4.21.- (0.1%)" "ribonuclease III (99.9%) Serine endopeptidases (0.1%)" "GO:0006364 (10.1%) GO:0006397 (10.1%) GO:0008033 (10.1%)" "GO:0005737 (10%) GO:0016442 (0.1%) GO:0070578 (0.1%)" "GO:0004525 (10.1%) GO:0003725 (10.1%) GO:0046872 (10.1%)" "rRNA processing (10.1%) mRNA processing (10.1%) tRNA processing (10.1%)" "cytoplasm (10%) RISC complex (0.1%) RISC-loading complex (0.1%)" "ribonuclease III activity (10.1%) double-stranded RNA binding (10.1%) metal ion binding (10.1%)" "IPR014720 (25.3%) IPR000999 (24.8%) IPR036389 (24.8%)" "Double-stranded RNA-binding domain (25.3%) Ribonuclease III domain (24.8%) Ribonuclease III, endonuclease domain superfamily (24.8%)" GTADEKFAALEAAGVK root 6.2.1.5 (100%) succinate--CoA ligase (ADP-forming) (100%) "GO:0006099 (20%) GO:0006104 (0%) GO:0006086 (0%)" "GO:0009361 (19.9%) GO:0005829 (0.1%) GO:0042709 (0%)" "GO:0004775 (20%) GO:0004776 (19.9%) GO:0000166 (19.5%)" "tricarboxylic acid cycle (20%) succinyl-CoA metabolic process (0%) pyruvate decarboxylation to acetyl-CoA (0%)" "succinate-CoA ligase complex (ADP-forming) (19.9%) cytosol (0.1%) succinate-CoA ligase complex (0%)" "succinate-CoA ligase (ADP-forming) activity (20%) succinate-CoA ligase (GDP-forming) activity (19.9%) nucleotide binding (19.5%)" "IPR016102 (14.5%) IPR017440 (14.4%) IPR005811 (14.4%)" "Succinyl-CoA synthetase-like (14.5%) ATP-citrate lyase/succinyl-CoA ligase, active site (14.4%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.4%)" AIVDDIDHLSNRR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.4%) GO:0006508 (1.7%)" GO:0000428 (19.2%) "GO:0003677 (19.4%) GO:0003899 (19.4%) GO:0032549 (19.2%)" "DNA-templated transcription (19.4%) proteolysis (1.7%)" DNA-directed RNA polymerase complex (19.2%) "DNA binding (19.4%) DNA-directed RNA polymerase activity (19.4%) ribonucleoside binding (19.2%)" "IPR007642 (7.7%) IPR007120 (7.7%) IPR007121 (7.7%)" "RNA polymerase Rpb2, domain 2 (7.7%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.7%) RNA polymerase, beta subunit, conserved site (7.7%)" TVIGGAAEQAIAPISGAAWLK GLILVDTKYEFGHR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" ILQDADDIYMSLMR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (12.5%) IPR004739 (12.5%) IPR014729 (12.5%)" "GMP synthase, C-terminal (12.5%) GMP synthase, glutamine amidotransferase (12.5%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" ETGACNVQVIGK root "GO:0000027 (0.4%) GO:0000028 (0.4%) GO:0000967 (0.4%)" GO:0005829 (0.4%) "GO:0003723 (97.9%) GO:1990275 (0.4%) GO:0008168 (0.2%)" "ribosomal large subunit assembly (0.4%) ribosomal small subunit assembly (0.4%) rRNA 5'-end processing (0.4%)" cytosol (0.4%) "RNA binding (97.9%) preribosome binding (0.4%) methyltransferase activity (0.2%)" "IPR001890 (25%) IPR035920 (25%) IPR051925 (25%)" "RNA-binding, CRM domain (25%) YhbY-like superfamily (25%) RNA-binding domain-containing protein (25%)" NKNPLIILESADK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0002181 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" cytoplasmic translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000702 (20%) IPR002358 (20%) IPR019906 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, conserved site (20%) Large ribosomal subunit protein uL6, bacteria (20%)" KFNQLAANQPNTVVLAISK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.11.1.24 (95%) 1.11.1.- (5%)" "thioredoxin-dependent peroxiredoxin (95%) Peroxidases (5%)" GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" KIDADIVMASDPDADRVGMACK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.2 (68.8%) 5.4.2.- (31.3%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (68.8%) Phosphotransferases (phosphomutases) (31.3%)" "GO:0005975 (24.2%) GO:0006166 (24.2%)" "GO:0000287 (24.2%) GO:0008973 (24.2%) GO:0004614 (3%)" "carbohydrate metabolic process (24.2%) purine ribonucleoside salvage (24.2%)" "magnesium ion binding (24.2%) phosphopentomutase activity (24.2%) phosphoglucomutase activity (3%)" "IPR005841 (12.6%) IPR005844 (12.6%) IPR005845 (12.6%)" "Alpha-D-phosphohexomutase superfamily (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.6%)" VGNTLSESGSVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016740 (100%) transferase activity (100%) "IPR029044 (98.2%) IPR005835 (1.8%)" "Nucleotide-diphospho-sugar transferases (98.2%) Nucleotidyl transferase domain (1.8%)" TTLTEALLYESGIIKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.5%) IPR000795 (7.5%) IPR005225 (7.5%)" "Elongation factor EFG, domain V-like (7.5%) Translational (tr)-type GTP-binding domain (7.5%) Small GTP-binding domain (7.5%)" GHENYQDIK Pseudomonadati Bacteria Pseudomonadati 6.3.2.13 (100%) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (100%) "GO:0008360 (13.5%) GO:0051301 (13.5%) GO:0009252 (10.8%)" GO:0005737 (13.5%) "GO:0005524 (13.5%) GO:0008765 (13.5%) GO:0000287 (10.8%)" "regulation of cell shape (13.5%) cell division (13.5%) peptidoglycan biosynthetic process (10.8%)" cytoplasm (13.5%) "ATP binding (13.5%) UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity (13.5%) magnesium ion binding (10.8%)" "IPR004101 (14.4%) IPR005761 (14.4%) IPR013221 (14.4%)" "Mur ligase, C-terminal (14.4%) UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (14.4%) Mur ligase, central (14.4%)" EGVASVVYTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR032573 (100%) Protein of unknown function DUF4925 (100%) AITAILPILDDLER Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006457 (16.7%) GO:0005737 (16.7%) "GO:0000774 (16.7%) GO:0042803 (16.7%) GO:0051082 (16.7%)" protein folding (16.7%) cytoplasm (16.7%) "adenyl-nucleotide exchange factor activity (16.7%) protein homodimerization activity (16.7%) unfolded protein binding (16.7%)" "IPR000740 (33.3%) IPR009012 (33.3%) IPR013805 (33.3%)" "GrpE nucleotide exchange factor (33.3%) GrpE nucleotide exchange factor, head (33.3%) GrpE nucleotide exchange factor, coiled-coil (33.3%)" KLDGIDFLGQGTIYPDIVESGTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0006177 (0.6%) GO:0005829 (32.7%) "GO:0003921 (32.7%) GO:0005524 (32.7%) GO:0016740 (0.6%)" GMP biosynthetic process (0.6%) cytosol (32.7%) "GMP synthase activity (32.7%) ATP binding (32.7%) transferase activity (0.6%)" "IPR025777 (17%) IPR014729 (16.7%) IPR017926 (16.7%)" "GMP synthetase ATP pyrophosphatase domain (17%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Glutamine amidotransferase (16.7%)" THYIDESEIAVLQEWR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25%) GO:0044205 (25%)" "GO:0000287 (25%) GO:0004588 (25%)" "pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" "magnesium ion binding (25%) orotate phosphoribosyltransferase activity (25%)" "IPR000836 (25%) IPR004467 (25%) IPR023031 (25%)" "Phosphoribosyltransferase domain (25%) Orotate phosphoribosyl transferase domain (25%) Orotate phosphoribosyltransferase (25%)" TGDKVELEGK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006310 (14.2%) GO:0006355 (14.2%) GO:0006417 (14.2%)" "GO:0005829 (14.3%) GO:0005694 (14.2%) GO:1990177 (0%)" "GO:0003677 (14.3%) GO:0030527 (14.3%)" "DNA recombination (14.2%) regulation of DNA-templated transcription (14.2%) regulation of translation (14.2%)" "cytosol (14.3%) chromosome (14.2%) IHF-DNA complex (0%)" "DNA binding (14.3%) structural constituent of chromatin (14.3%)" "IPR000119 (25%) IPR010992 (25%) IPR020816 (25%)" "Histone-like DNA-binding protein (25%) Integration host factor (IHF)-like DNA-binding domain superfamily (25%) Histone-like DNA-binding protein, conserved site (25%)" KDRVDDALCATR root 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.3%) GO:0005737 (15.9%) "GO:0005524 (17.3%) GO:0140662 (17.3%) GO:0016853 (16.3%)" protein refolding (17.3%) cytoplasm (15.9%) "ATP binding (17.3%) ATP-dependent protein folding chaperone (17.3%) isomerase activity (16.3%)" "IPR001844 (17%) IPR002423 (17%) IPR018370 (16.6%)" "Chaperonin Cpn60/GroEL (17%) Chaperonin Cpn60/GroEL/TCP-1 family (17%) Chaperonin Cpn60, conserved site (16.6%)" SVFSHLAGSDSYVFDDFTHQQLDKFTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.1.1.1 (100%) alanine racemase (100%) GO:0030632 (19.7%) GO:0005829 (1.3%) "GO:0005524 (19.7%) GO:0008784 (19.7%) GO:0016881 (19.7%)" D-alanine biosynthetic process (19.7%) cytosol (1.3%) "ATP binding (19.7%) alanine racemase activity (19.7%) acid-amino acid ligase activity (19.7%)" "IPR000821 (10.1%) IPR001608 (10.1%) IPR009006 (10.1%)" "Alanine racemase (10.1%) Alanine racemase, N-terminal (10.1%) Alanine racemase/group IV decarboxylase, C-terminal (10.1%)" AEANWNMTNFVNDQIELVKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (16.7%) IPR014729 (16.7%) IPR017926 (16.7%)" "GMP synthase, C-terminal (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Glutamine amidotransferase (16.7%)" ATIGAVGNSDHALEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0002181 (20%) GO:0015934 (20%) "GO:0003735 (20%) GO:0016740 (20%) GO:0019843 (20%)" cytoplasmic translation (20%) large ribosomal subunit (20%) "structural constituent of ribosome (20%) transferase activity (20%) rRNA binding (20%)" "IPR002171 (11.1%) IPR005880 (11.1%) IPR008991 (11.1%)" "Large ribosomal subunit protein uL2 (11.1%) Large ribosomal subunit protein uL2, bacteria/organella (11.1%) Translation protein SH3-like domain superfamily (11.1%)" EIPSDIVYQDDLVTAFR Bacteria Bacteria "3.9.1.- (89.5%) 3.-.-.- (10.5%)" "Acting on phosphorus-nitrogen bonds (89.5%) Hydrolases (10.5%)" GO:0055130 (0.4%) "GO:0005737 (0.4%) GO:0005829 (0.4%)" "GO:0016787 (44.8%) GO:0000166 (41.2%) GO:0003824 (9.4%)" D-alanine catabolic process (0.4%) "cytoplasm (0.4%) cytosol (0.4%)" "hydrolase activity (44.8%) nucleotide binding (41.2%) catalytic activity (9.4%)" "IPR001310 (25.2%) IPR011146 (25.2%) IPR036265 (25.2%)" "Histidine triad (HIT) protein (25.2%) HIT-like domain (25.2%) HIT-like superfamily (25.2%)" DLVVDMGQFYAQYEK root "1.3.5.1 (99.6%) 1.3.99.1 (0.2%) 1.-.-.- (0.1%)" "succinate dehydrogenase (99.6%) Deleted entry (0.2%) Oxidoreductases (0.1%)" "GO:0006099 (12.6%) GO:0022904 (12.6%) GO:0009060 (0.1%)" "GO:0005743 (0%) GO:0005886 (0%) GO:0016020 (0%)" "GO:0009055 (12.5%) GO:0051539 (12.4%) GO:0051537 (12.3%)" "tricarboxylic acid cycle (12.6%) respiratory electron transport chain (12.6%) aerobic respiration (0.1%)" "mitochondrial inner membrane (0%) plasma membrane (0%) membrane (0%)" "electron transfer activity (12.5%) 4 iron, 4 sulfur cluster binding (12.4%) 2 iron, 2 sulfur cluster binding (12.3%)" "IPR004489 (11.2%) IPR050573 (11.2%) IPR025192 (11.2%)" "Succinate dehydrogenase/fumarate reductase iron-sulphur protein (11.2%) Succinate Dehydrogenase/Fumarate Reductase Iron-Sulfur (11.2%) Succinate dehydogenase/fumarate reductase N-terminal (11.2%)" NKDYINPSETTTGYMEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR001466 (25%) IPR012338 (25%) IPR050491 (25%)" "Beta-lactamase-related (25%) Beta-lactamase/transpeptidase-like (25%) Beta-lactamase AmpC-like (25%)" ENLLECEVLDSSILGGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola EGQKVPEMTPAIVESISER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" EASEGELKGILGYTEDAVVSTDFR Pseudomonadati Bacteria Pseudomonadati "1.2.1.- (95.5%) 1.2.1.12 (4.5%)" "With NAD(+) or NADP(+) as acceptor (95.5%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (4.5%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (11.9%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (11.9%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" RLGFSDFQIAR root "6.3.5.5 (80%) 6.3.4.16 (8.3%) 3.5.2.3 (5%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (80%) carbamoyl-phosphate synthase (ammonia) (8.3%) dihydroorotase (5%)" "GO:0006541 (13%) GO:0006526 (12.6%) GO:0006221 (12.2%)" "GO:0005737 (12%) GO:0005951 (0.8%) GO:0005829 (0.2%)" "GO:0004088 (13%) GO:0005524 (12.8%) GO:0046872 (12.8%)" "glutamine metabolic process (13%) L-arginine biosynthetic process (12.6%) pyrimidine nucleotide biosynthetic process (12.2%)" "cytoplasm (12%) carbamoyl-phosphate synthase complex (0.8%) cytosol (0.2%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13%) ATP binding (12.8%) metal ion binding (12.8%)" "IPR005480 (9.5%) IPR036897 (9.5%) IPR005479 (9.3%)" "Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (9.5%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily (9.5%) Carbamoyl phosphate synthase, ATP-binding domain (9.3%)" GSPIQPTLDSLK root 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (47.1%) GO:0006995 (0.3%) GO:0009267 (0.3%)" "GO:0030288 (49.1%) GO:0030313 (0.9%) GO:0016020 (0.3%)" "GO:0016597 (0.3%) GO:0016787 (0.3%)" "amino acid transport (47.1%) cellular response to nitrogen starvation (0.3%) cellular response to starvation (0.3%)" "outer membrane-bounded periplasmic space (49.1%) cell envelope (0.9%) membrane (0.3%)" "amino acid binding (0.3%) hydrolase activity (0.3%)" "IPR001638 (34.3%) IPR018313 (33.1%) IPR005768 (32.6%)" "Solute-binding protein family 3/N-terminal domain of MltF (34.3%) Solute-binding protein family 3, conserved site (33.1%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (32.6%)" FGPQTDDHDYNFK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0032790 (20%) "GO:0005829 (20%) GO:0016020 (19.9%)" "GO:0003743 (20.1%) GO:0043022 (20%)" ribosome disassembly (20%) "cytosol (20%) membrane (19.9%)" "translation initiation factor activity (20.1%) ribosome binding (20%)" "IPR001288 (18%) IPR019815 (18%) IPR036788 (17.9%)" "Translation initiation factor 3 (18%) Translation initiation factor 3, C-terminal (18%) Translation initiation factor 3 (IF-3), C-terminal domain superfamily (17.9%)" YGEQKSEAEDER Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 3.1.1.61 (100%) protein-glutamate methylesterase (100%) GO:0000160 (46.9%) "GO:0003723 (46.9%) GO:0008984 (6.3%)" phosphorelay signal transduction system (46.9%) "RNA binding (46.9%) protein-glutamate methylesterase activity (6.3%)" "IPR001789 (20%) IPR005561 (20%) IPR011006 (20%)" "Signal transduction response regulator, receiver domain (20%) ANTAR domain (20%) CheY-like superfamily (20%)" INTIMIDMNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (23.3%) GO:0044208 (23.3%) GO:0006188 (8%)" "GO:0004018 (31.3%) GO:0070626 (12.5%) GO:0016829 (1.7%)" "'de novo' IMP biosynthetic process (23.3%) 'de novo' AMP biosynthetic process (23.3%) IMP biosynthetic process (8%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (31.3%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (12.5%) lyase activity (1.7%)" "IPR008948 (13.1%) IPR022761 (13.1%) IPR047136 (13.1%)" "L-Aspartase-like (13.1%) Fumarate lyase, N-terminal (13.1%) Adenylosuccinate lyase PurB, bacteria (13.1%)" ASVPSGASTGEHEALELRDGDKTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.9%) IPR020809 (16.9%) IPR020810 (16.9%)" "Enolase (16.9%) Enolase, conserved site (16.9%) Enolase, C-terminal TIM barrel domain (16.9%)" TTEAAPAAEVPATEEPKAESAE Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (35.3%) IPR036373 (35.3%) IPR047859 (29.4%)" "Large ribosomal subunit protein bL17 (35.3%) Large ribosomal subunit protein bL17 superfamily (35.3%) Large ribosomal subunit protein bL17, conserved site (29.4%)" YKDGVAYDKFEDPELR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004824 (16.7%) GO:0005524 (16.7%)" lysyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) lysine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002313 (12.4%) IPR004364 (12.4%) IPR004365 (12.4%)" "Lysine-tRNA ligase, class II (12.4%) Aminoacyl-tRNA synthetase, class II (D/K/N) (12.4%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (12.4%)" IDGVDHEFGTIPGVIEDVTNIILNLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.7%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.7%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011260 (16.7%) IPR011262 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.7%) DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" ELYTIISDHSGRPYEEIER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.21.92 (100%) endopeptidase Clp (100%) GO:0006515 (16.7%) "GO:0005737 (16.7%) GO:0009368 (16.7%)" "GO:0004176 (16.7%) GO:0004252 (16.7%) GO:0051117 (16.7%)" protein quality control for misfolded or incompletely synthesized proteins (16.7%) "cytoplasm (16.7%) endopeptidase Clp complex (16.7%)" "ATP-dependent peptidase activity (16.7%) serine-type endopeptidase activity (16.7%) ATPase binding (16.7%)" "IPR001907 (33.3%) IPR023562 (33.3%) IPR029045 (33.3%)" "ATP-dependent Clp protease proteolytic subunit (33.3%) Clp protease proteolytic subunit /Translocation-enhancing protein TepA (33.3%) ClpP/crotonase-like domain superfamily (33.3%)" EAGQIAGLEVKR Pseudomonadati Bacteria Pseudomonadati "GO:0042026 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (6.8%) GO:0070013 (0.1%)" "GO:0005524 (30.9%) GO:0140662 (30.9%) GO:0051082 (30.8%)" "protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (6.8%) intracellular organelle lumen (0.1%)" "ATP binding (30.9%) ATP-dependent protein folding chaperone (30.9%) unfolded protein binding (30.8%)" "IPR013126 (16.7%) IPR012725 (16.7%) IPR018181 (16.7%)" "Heat shock protein 70 family (16.7%) Chaperone DnaK (16.7%) Heat shock protein 70, conserved site (16.7%)" QRPYDVIADPTVAPR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "7.2.1.1 (95.2%) 1.6.5.- (4.8%)" "NADH:ubiquinone reductase (Na(+)-transporting) (95.2%) With a quinone or similar compound as acceptor (4.8%)" GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (25%) IPR022615 (25%) IPR056147 (25%)" "Na(+)-translocating NADH-quinone reductase subunit A (25%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (25%) NqrA, N-terminal barrel-sandwich hybrid domain (25%)" ADKIAIVNMGSLFQQVAQK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0050821 (24%) GO:0061077 (1.4%) GO:0006457 (0.2%)" "GO:0005829 (24%) GO:0042597 (23.6%) GO:0030288 (0.2%)" "GO:0051082 (24%) GO:0003677 (1.6%) GO:0001530 (0.2%)" "protein stabilization (24%) obsolete chaperone-mediated protein folding (1.4%) protein folding (0.2%)" "cytosol (24%) periplasmic space (23.6%) outer membrane-bounded periplasmic space (0.2%)" "unfolded protein binding (24%) DNA binding (1.6%) lipopolysaccharide binding (0.2%)" "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" GFHEEPQVLHYDSR root 3.4.11.18 (100%) methionyl aminopeptidase (100%) GO:0006508 (19.9%) GO:0005829 (19.9%) "GO:0070006 (19.9%) GO:0004239 (19.6%) GO:0005506 (18.1%)" proteolysis (19.9%) cytosol (19.9%) "metalloaminopeptidase activity (19.9%) initiator methionyl aminopeptidase activity (19.6%) iron ion binding (18.1%)" "IPR000994 (25%) IPR001714 (25%) IPR002467 (25%)" "Peptidase M24 (25%) Peptidase M24, methionine aminopeptidase (25%) Peptidase M24A, methionine aminopeptidase, subfamily 1 (25%)" KITTEETGVNR Christensenella hongkongensis Bacteria Bacillati Bacillota Clostridia Christensenellales Christensenellaceae Christensenella Christensenella hongkongensis GO:0006508 (25%) "GO:0004177 (25%) GO:0008237 (25%) GO:0046872 (25%)" proteolysis (25%) "aminopeptidase activity (25%) metallopeptidase activity (25%) metal ion binding (25%)" "IPR000787 (33.3%) IPR035097 (33.3%) IPR052170 (33.3%)" "Peptidase M29 (33.3%) Peptidase M29, N-terminal (33.3%) Metal-dependent Exopeptidase M29 (33.3%)" ALTDFMVEFERR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.8%) GO:0008615 (19.7%) GO:0006563 (0.1%)" "GO:0005737 (19.8%) GO:0005829 (0.1%)" "GO:0004648 (19.8%) GO:0030170 (19.8%) GO:0008483 (0.4%)" "L-serine biosynthetic process (19.8%) pyridoxine biosynthetic process (19.7%) L-serine metabolic process (0.1%)" "cytoplasm (19.8%) cytosol (0.1%)" "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.8%) pyridoxal phosphate binding (19.8%) transaminase activity (0.4%)" "IPR015422 (16.9%) IPR015424 (16.9%) IPR022278 (16.9%)" "Pyridoxal phosphate-dependent transferase, small domain (16.9%) Pyridoxal phosphate-dependent transferase (16.9%) Phosphoserine aminotransferase (16.9%)" AAEGLLYNANHDSELQDEMKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0008870 (100%) galactoside O-acetyltransferase activity (100%) "IPR001451 (20%) IPR011004 (20%) IPR018357 (20%)" "Hexapeptide repeat (20%) Trimeric LpxA-like superfamily (20%) Hexapeptide transferase, conserved site (20%)" HYESDKAVAAICHGVSGLLNVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.2.1.130 (100%) D-lactate dehydratase (100%) GO:0019243 (31.4%) GO:0005737 (31.4%) "GO:0019172 (31.4%) GO:0016740 (5.9%)" methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (31.4%) cytoplasm (31.4%) "glyoxalase III activity (31.4%) transferase activity (5.9%)" "IPR002818 (33.3%) IPR029062 (33.3%) IPR050325 (33.3%)" "DJ-1/PfpI (33.3%) Class I glutamine amidotransferase-like (33.3%) Protein/nucleic acid deglycase (33.3%)" AFNMIVLGGLLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.3 (57.1%) 1.2.7.1 (39.3%) 1.2.1.58 (3.6%)" "2-oxoglutarate synthase (57.1%) pyruvate synthase (39.3%) phenylglyoxylate dehydrogenase (acylating) (3.6%)" GO:0016020 (0.8%) "GO:0016903 (76.2%) GO:0047553 (12.7%) GO:0019164 (9.5%)" membrane (0.8%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors (76.2%) 2-oxoglutarate synthase activity (12.7%) pyruvate synthase activity (9.5%)" "IPR002869 (33.4%) IPR019752 (33.4%) IPR052554 (33.1%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.4%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.4%) 2-oxoglutarate synthase subunit KorC (33.1%)" VIPYFNFVVPTELPGVDPK NLLYQIRPAFGGNIVATIVNPEHRPQMATVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) GO:0033539 (32.5%) "GO:0009055 (32.5%) GO:0050660 (32.5%) GO:0016491 (2%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (32.5%) "electron transfer activity (32.5%) flavin adenine dinucleotide binding (32.5%) oxidoreductase activity (2%)" "IPR001308 (16.8%) IPR014729 (16.8%) IPR014730 (16.8%)" "Electron transfer flavoprotein alpha subunit/FixB (16.8%) Rossmann-like alpha/beta/alpha sandwich fold (16.8%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.8%)" GAGVHHVAFAIEDGVANALAEAESK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (46.7%) "GO:0004493 (46.7%) GO:0016829 (3.3%) GO:0051213 (3.3%)" L-methylmalonyl-CoA metabolic process (46.7%) "methylmalonyl-CoA epimerase activity (46.7%) lyase activity (3.3%) dioxygenase activity (3.3%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" GKDLSNFITTAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" CFAFLAGHESFAAAEGAIK Bacteria Bacteria IPR025964 (100%) GGGtGRT protein (100%) HIKPNAIVIIDTDSFKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.7.11 (50%) 1.2.7.3 (50%)" "2-oxoacid oxidoreductase (ferredoxin) (50%) 2-oxoglutarate synthase (50%)" GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.5%) IPR002880 (12.5%) IPR009014 (12.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" VVVVCGYGDVGKGCSHSMR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.13.2.1 (92.3%) 3.3.1.1 (7.7%)" "adenosylhomocysteinase (92.3%) Transferred entry: 3.13.2.1 (7.7%)" "GO:0006730 (20.3%) GO:0033353 (20.3%) GO:0071269 (18.7%)" GO:0005829 (20.3%) "GO:0004013 (20.3%) GO:0016787 (0.2%)" "one-carbon metabolic process (20.3%) S-adenosylmethionine cycle (20.3%) L-homocysteine biosynthetic process (18.7%)" cytosol (20.3%) "adenosylhomocysteinase activity (20.3%) hydrolase activity (0.2%)" "IPR000043 (20%) IPR015878 (20%) IPR020082 (20%)" "Adenosylhomocysteinase-like (20%) S-adenosyl-L-homocysteine hydrolase, NAD binding domain (20%) S-adenosyl-L-homocysteine hydrolase, conserved site (20%)" VKAGDILTEGYSTQKGELALGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (14.8%) GO:0006508 (13%)" GO:0000428 (14.8%) "GO:0003677 (14.8%) GO:0003899 (14.8%) GO:0032549 (14.8%)" "DNA-templated transcription (14.8%) proteolysis (13%)" DNA-directed RNA polymerase complex (14.8%) "DNA binding (14.8%) DNA-directed RNA polymerase activity (14.8%) ribonucleoside binding (14.8%)" "IPR007120 (7.2%) IPR007121 (7.2%) IPR007641 (7.2%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.2%) RNA polymerase, beta subunit, conserved site (7.2%) RNA polymerase Rpb2, domain 7 (7.2%)" ILYTHLYNVADLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" GAYFANPCFAQIHPTCIPVHGDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (15.3%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (15.3%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" NGAFSLIGGGDSVACINK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (32.4%) IPR015824 (32.4%) IPR036043 (32.4%)" "Phosphoglycerate kinase (32.4%) Phosphoglycerate kinase, N-terminal (32.4%) Phosphoglycerate kinase superfamily (32.4%)" IYGPTGIGVLYGKEDWLER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.8.1.7 (100%) cysteine desulfurase (100%) GO:0006534 (32.2%) "GO:0030170 (32.2%) GO:0031071 (32.2%) GO:0008483 (3.4%)" cysteine metabolic process (32.2%) "pyridoxal phosphate binding (32.2%) cysteine desulfurase activity (32.2%) transaminase activity (3.4%)" "IPR000192 (16.7%) IPR010970 (16.7%) IPR015421 (16.7%)" "Aminotransferase class V domain (16.7%) Cysteine desulfurase, SufS (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" NVIQGHDSITHVINSHEPFLSTLIGR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (20%) IPR011013 (20%) IPR014718 (20%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (20%) Galactose mutarotase-like domain superfamily (20%) Glycoside hydrolase-type carbohydrate-binding (20%)" EIEVLGTCDNTYPLQKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.1%) GO:0005737 (19.4%) "GO:0003676 (20.1%) GO:0005524 (20.1%) GO:0004816 (19.9%)" asparaginyl-tRNA aminoacylation (20.1%) cytoplasm (19.4%) "nucleic acid binding (20.1%) ATP binding (20.1%) asparagine-tRNA ligase activity (19.9%)" "IPR004365 (14.4%) IPR012340 (14.4%) IPR045864 (14.4%)" "OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (14.4%) Nucleic acid-binding, OB-fold (14.4%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.4%)" TLSNATLPEGYTLGNVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR033408 (100%) Outer membrane protein SusF, N-terminal domain (100%) TAEFLWQEGHTAHATREEAETEAVK TNQNMTIDLRPTCNKGDR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.9%) IPR007121 (7.9%) IPR007645 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) RNA polymerase, beta subunit, conserved site (7.9%) RNA polymerase Rpb2, domain 3 (7.9%)" ITHIPTGIVTQCQNDR root "GO:0075523 (0.6%) GO:0006415 (0.1%)" "GO:0005737 (49.4%) GO:0005829 (0.1%)" "GO:0016149 (48.4%) GO:0003747 (1.5%)" "viral translational frameshifting (0.6%) translational termination (0.1%)" "cytoplasm (49.4%) cytosol (0.1%)" "translation release factor activity, codon specific (48.4%) translation release factor activity (1.5%)" "IPR000352 (25.3%) IPR045853 (25.3%) IPR005139 (24.7%)" "Peptide chain release factor class I (25.3%) Peptide chain release factor class I superfamily (25.3%) Peptide chain release factor (24.7%)" KWEIDSLCYPIR Bacteria Bacteria 3.2.1.163 (100%) 1,6-alpha-D-mannosidase (100%) GO:0005975 (69%) GO:0016020 (0.2%) "GO:0016787 (30.6%) GO:0016798 (0.3%)" carbohydrate metabolic process (69%) membrane (0.2%) "hydrolase activity (30.6%) hydrolase activity, acting on glycosyl bonds (0.3%)" "IPR008313 (30.4%) IPR008928 (30.4%) IPR012341 (30.4%)" "Metal-independent alpha-mannosidase (30.4%) Six-hairpin glycosidase superfamily (30.4%) Six-hairpin glycosidase-like superfamily (30.4%)" KAMIGNNVSHSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (24.9%) "GO:0005840 (25.2%) GO:1990904 (24.9%)" GO:0003735 (24.9%) translation (24.9%) "ribosome (25.2%) ribonucleoprotein complex (24.9%)" structural constituent of ribosome (24.9%) "IPR001383 (25%) IPR026569 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL28, bacteria (25%) Large ribosomal subunit protein bL28 (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" IQEGPQATINR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0071709 (49.3%) GO:0009279 (50.7%) membrane assembly (49.3%) cell outer membrane (50.7%) "IPR010827 (21.1%) IPR034746 (21.1%) IPR039910 (21.1%)" "POTRA domain, BamA/TamA-like (21.1%) POTRA domain (21.1%) Surface antigen D15-like (21.1%)" EAFSAKPGDLILILSGPDAMK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.12 (100%) aspartate--tRNA ligase (100%) "GO:0006422 (18.8%) GO:0006418 (1.6%)" GO:0005737 (20.3%) "GO:0005524 (20.3%) GO:0003676 (18.8%) GO:0004815 (18.8%)" "aspartyl-tRNA aminoacylation (18.8%) tRNA aminoacylation for protein translation (1.6%)" cytoplasm (20.3%) "ATP binding (20.3%) nucleic acid binding (18.8%) aspartate-tRNA ligase activity (18.8%)" "IPR004115 (9.6%) IPR004364 (9.6%) IPR029351 (9.6%)" "GAD-like domain superfamily (9.6%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.6%) GAD domain (9.6%)" LHQIMSAIHEQCVAHGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006537 (26.2%) GO:0005829 (23.8%) "GO:0004354 (26.2%) GO:0000166 (23.8%)" glutamate biosynthetic process (26.2%) cytosol (23.8%) "glutamate dehydrogenase (NADP+) activity (26.2%) nucleotide binding (23.8%)" "IPR006095 (12.5%) IPR006096 (12.5%) IPR006097 (12.5%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.5%)" IEIPGCSLCMGNQAR root "4.2.1.3 (52.2%) 4.2.1.99 (47.8%)" "aconitate hydratase (52.2%) 2-methylisocitrate dehydratase (47.8%)" "GO:0006099 (12.5%) GO:0019629 (12.5%) GO:0006097 (0%)" "GO:0005829 (12.5%) GO:0016020 (0%) GO:0012505 (0%)" "GO:0003994 (12.5%) GO:0046872 (12.5%) GO:0047456 (12.5%)" "tricarboxylic acid cycle (12.5%) propionate catabolic process, 2-methylcitrate cycle (12.5%) glyoxylate cycle (0%)" "cytosol (12.5%) membrane (0%) endomembrane system (0%)" "aconitate hydratase activity (12.5%) metal ion binding (12.5%) 2-methylisocitrate dehydratase activity (12.5%)" "IPR001030 (9.3%) IPR018136 (9.3%) IPR050926 (9.3%)" "Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (9.3%) Aconitase family, 4Fe-4S cluster binding site (9.3%) Aconitase/IPM Isomerase (9.3%)" DHGLENLIEGELRPGMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25.7%) GO:0044205 (25.7%) GO:0006222 (0.2%)" "GO:0004588 (25.7%) GO:0000287 (22.7%) GO:0016757 (0.2%)" "pyrimidine nucleobase biosynthetic process (25.7%) 'de novo' UMP biosynthetic process (25.7%) UMP biosynthetic process (0.2%)" "orotate phosphoribosyltransferase activity (25.7%) magnesium ion binding (22.7%) glycosyltransferase activity (0.2%)" "IPR000836 (25.1%) IPR023031 (25.1%) IPR029057 (25.1%)" "Phosphoribosyltransferase domain (25.1%) Orotate phosphoribosyltransferase (25.1%) Phosphoribosyltransferase-like (25.1%)" SQDLASQAEESFVEAE root "GO:0006412 (32.9%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0022627 (32.8%) GO:0005840 (0.9%) GO:0005737 (0.1%)" "GO:0003735 (33%) GO:0008270 (0.1%)" "translation (32.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (32.8%) ribosome (0.9%) cytoplasm (0.1%)" "structural constituent of ribosome (33%) zinc ion binding (0.1%)" "IPR001865 (25.1%) IPR023591 (25.1%) IPR005706 (25%)" "Small ribosomal subunit protein uS2 (25.1%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.1%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%)" GVNVVLTTGRPYAGVHNYLK root "3.1.3.23 (93.4%) 3.1.3.- (6.6%)" "sugar-phosphatase (93.4%) Phosphoric monoester hydrolases (6.6%)" GO:0016311 (0.5%) GO:0005829 (32.8%) "GO:0000287 (32.8%) GO:0016791 (25.8%) GO:0050308 (7.8%)" dephosphorylation (0.5%) cytosol (32.8%) "magnesium ion binding (32.8%) phosphatase activity (25.8%) sugar-phosphatase activity (7.8%)" "IPR006379 (25.8%) IPR023214 (25.8%) IPR036412 (25.8%)" "HAD-superfamily hydrolase, subfamily IIB (25.8%) HAD superfamily (25.8%) HAD-like superfamily (25.8%)" HELASSAYNKR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (19.9%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (19.9%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" GGAALNPNEQVGDVLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.17.4.2 (100%) ribonucleoside-triphosphate reductase (thioredoxin) (100%) "GO:0006260 (16.4%) GO:0009265 (16.4%)" GO:0031250 (16.4%) "GO:0004748 (16.4%) GO:0005524 (16.4%) GO:0008998 (16.4%)" "DNA replication (16.4%) 2'-deoxyribonucleotide biosynthetic process (16.4%)" anaerobic ribonucleoside-triphosphate reductase complex (16.4%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.4%) ATP binding (16.4%) ribonucleoside-triphosphate reductase (thioredoxin) activity (16.4%)" "IPR005144 (50%) IPR012833 (50%)" "ATP-cone domain (50%) Ribonucleoside-triphosphate reductase, anaerobic (50%)" INPGNYVDPGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.17.7.3 (97.3%) 1.17.7.1 (2.7%)" "(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (97.3%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) (2.7%)" "GO:0016114 (17.2%) GO:0019288 (17.2%)" "GO:0005506 (17.2%) GO:0046429 (17.2%) GO:0051539 (17.2%)" "terpenoid biosynthetic process (17.2%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.2%)" "iron ion binding (17.2%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.2%) 4 iron, 4 sulfur cluster binding (17.2%)" "IPR004588 (25%) IPR011005 (25%) IPR017178 (25%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25%) Dihydropteroate synthase-like superfamily (25%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (25%)" NSTAMLTTFNEVNMKPIMDLRK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "2.3.1.61 (98.6%) 2.3.1.- (1.4%)" "dihydrolipoyllysine-residue succinyltransferase (98.6%) Transferring groups other than amino-acyl groups (1.4%)" "GO:0006099 (20.1%) GO:0033512 (19.4%) GO:0006554 (0.3%)" "GO:0005829 (20.1%) GO:0045252 (19.7%) GO:0005737 (0%)" "GO:0004149 (20.1%) GO:0016746 (0.2%) GO:0031405 (0%)" "tricarboxylic acid cycle (20.1%) L-lysine catabolic process to acetyl-CoA via saccharopine (19.4%) lysine catabolic process (0.3%)" "cytosol (20.1%) oxoglutarate dehydrogenase complex (19.7%) cytoplasm (0%)" "dihydrolipoyllysine-residue succinyltransferase activity (20.1%) acyltransferase activity (0.2%) lipoic acid binding (0%)" "IPR001078 (11.3%) IPR023213 (11.3%) IPR050537 (11.3%)" "2-oxoacid dehydrogenase acyltransferase, catalytic domain (11.3%) Chloramphenicol acetyltransferase-like domain superfamily (11.3%) 2-oxoacid dehydrogenase (11.3%)" FSPLDDVTMAIGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" TVAKVDEAADALKQIAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (32.7%) "GO:0022627 (32.7%) GO:0005840 (1.9%)" GO:0003735 (32.7%) translation (32.7%) "cytosolic small ribosomal subunit (32.7%) ribosome (1.9%)" structural constituent of ribosome (32.7%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" SLASIGGFVAADKDTINWLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.50 (66.7%) 2.3.1.47 (33.3%)" "serine C-palmitoyltransferase (66.7%) 8-amino-7-oxononanoate synthase (33.3%)" "GO:0030170 (48.8%) GO:0016740 (22%) GO:0008483 (19.5%)" "pyridoxal phosphate binding (48.8%) transferase activity (22%) transaminase activity (19.5%)" "IPR001917 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class-II, pyridoxal-phosphate binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" KHLKDDDSIEIINIHGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006355 (19.8%) GO:0000160 (0.9%)" "GO:0005829 (19.8%) GO:0032993 (19.8%)" "GO:0000156 (19.8%) GO:0000976 (19.8%)" "regulation of DNA-templated transcription (19.8%) phosphorelay signal transduction system (0.9%)" "cytosol (19.8%) protein-DNA complex (19.8%)" "phosphorelay response regulator activity (19.8%) transcription cis-regulatory region binding (19.8%)" "IPR001789 (16.9%) IPR001867 (16.9%) IPR011006 (16.9%)" "Signal transduction response regulator, receiver domain (16.9%) OmpR/PhoB-type DNA-binding domain (16.9%) CheY-like superfamily (16.9%)" EGVQEDILEILLNLK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.7%) GO:0006352 (0%) GO:0006879 (0%)" "GO:0000428 (16.9%) GO:0005737 (16.7%) GO:0000345 (0%)" "GO:0003899 (16.8%) GO:0046983 (16.8%) GO:0003677 (15.9%)" "DNA-templated transcription (16.7%) DNA-templated transcription initiation (0%) intracellular iron ion homeostasis (0%)" "DNA-directed RNA polymerase complex (16.9%) cytoplasm (16.7%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA-directed RNA polymerase activity (16.8%) protein dimerization activity (16.8%) DNA binding (15.9%)" "IPR011262 (17%) IPR011263 (17%) IPR036643 (17%)" "DNA-directed RNA polymerase, insert domain (17%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (17%) DNA-directed RNA polymerase, insert domain superfamily (17%)" NKLFGVTTLDIIR Bacteria Bacteria "1.1.1.37 (99.9%) 1.-.-.- (0.1%) 1.1.1.- (0.1%)" "malate dehydrogenase (99.9%) Oxidoreductases (0.1%) With NAD(+) or NADP(+) as acceptor (0.1%)" "GO:0006099 (24.9%) GO:0006108 (24.9%) GO:0006096 (0%)" "GO:0005737 (25%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0030060 (25%) GO:0016491 (0.1%) GO:0016615 (0%)" "tricarboxylic acid cycle (24.9%) malate metabolic process (24.9%) glycolytic process (0%)" "cytoplasm (25%) cytosol (0%) membrane (0%)" "L-malate dehydrogenase (NAD+) activity (25%) oxidoreductase activity (0.1%) malate dehydrogenase activity (0%)" "IPR001252 (14.4%) IPR036291 (14.4%) IPR001236 (14.3%)" "Malate dehydrogenase, active site (14.4%) NAD(P)-binding domain superfamily (14.4%) Lactate/malate dehydrogenase, N-terminal (14.3%)" LTGMAFRVPTPNVSVVDLTVRLEK root "1.2.1.12 (60.4%) 1.2.1.- (39.4%) 1.2.1.13 (0.1%)" "glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (60.4%) With NAD(+) or NADP(+) as acceptor (39.4%) glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) (0.1%)" "GO:0006006 (11.6%) GO:0006096 (8%) GO:0006915 (7.1%)" "GO:0005829 (7.7%) GO:0005856 (7.1%) GO:0005634 (7.1%)" "GO:0051287 (12.8%) GO:0004365 (12.2%) GO:0050661 (11.6%)" "glucose metabolic process (11.6%) glycolytic process (8%) apoptotic process (7.1%)" "cytosol (7.7%) cytoskeleton (7.1%) nucleus (7.1%)" "NAD binding (12.8%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (12.2%) NADP binding (11.6%)" "IPR020829 (17.7%) IPR020831 (17.7%) IPR036291 (16.6%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.7%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.7%) NAD(P)-binding domain superfamily (16.6%)" GRIPIVLGVGGNCTR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.3.3.7 (100%) 4-hydroxy-tetrahydrodipicolinate synthase (100%) "GO:0009089 (20.2%) GO:0019877 (20.2%)" "GO:0005829 (20.2%) GO:0016020 (19.2%)" GO:0008840 (20.2%) "lysine biosynthetic process via diaminopimelate (20.2%) diaminopimelate biosynthetic process (20.2%)" "cytosol (20.2%) membrane (19.2%)" 4-hydroxy-tetrahydrodipicolinate synthase activity (20.2%) "IPR002220 (25%) IPR005263 (25%) IPR013785 (25%)" "DapA-like (25%) 4-hydroxy-tetrahydrodipicolinate synthase, DapA (25%) Aldolase-type TIM barrel (25%)" EACGLGLKEAKDMVDGAPSVVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.5%)" "GO:0003729 (24.9%) GO:0003735 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.5%)" "mRNA binding (24.9%) structural constituent of ribosome (24.9%)" "IPR000206 (20.2%) IPR013823 (20.2%) IPR014719 (20.2%)" "Large ribosomal subunit protein bL12 (20.2%) Large ribosomal subunit protein bL12, C-terminal (20.2%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20.2%)" STLFNCLSNAK root GO:0005737 (20.1%) "GO:0005525 (20.2%) GO:0016887 (20.2%) GO:0005524 (20%)" cytoplasm (20.1%) "GTP binding (20.2%) ATP hydrolysis activity (20.2%) ATP binding (20%)" "IPR006073 (10.1%) IPR031167 (10.1%) IPR027417 (10.1%)" "GTP binding domain (10.1%) OBG-type guanine nucleotide-binding (G) domain (10.1%) P-loop containing nucleoside triphosphate hydrolase (10.1%)" YGNTHVVAGYIHGAEPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.1.3.- (100%) Acting on carbohydrates and derivatives (100%) GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" GGSPIPDEATSYER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005829 (50%) GO:0016491 (50%) cytosol (50%) oxidoreductase activity (50%) "IPR023210 (27.8%) IPR036812 (27.8%) IPR050523 (27.8%)" "NADP-dependent oxidoreductase domain (27.8%) NAD(P)-dependent oxidoreductase domain superfamily (27.8%) Aldo/Keto Reductase Detoxification and Biosynthesis (27.8%)" AYAVATSGSGKHER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (8.3%) IPR003029 (8.3%) IPR004087 (8.3%)" "Exoribonuclease, phosphorolytic domain 1 (8.3%) S1 domain (8.3%) K Homology domain (8.3%)" LLERNDLYSSEHGIGGIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR027304 (33.3%) IPR046357 (33.3%) IPR052029 (33.3%)" "Trigger factor/SurA domain superfamily (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) Periplasmic chaperone PpiD (33.3%)" TDNDFGAGLQKK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25.2%) GO:0009341 (25.2%) "GO:0004565 (25.2%) GO:0030246 (24.3%)" lactose catabolic process (25.2%) beta-galactosidase complex (25.2%) "beta-galactosidase activity (25.2%) carbohydrate binding (24.3%)" "IPR004199 (7.2%) IPR006102 (7.2%) IPR006103 (7.2%)" "Beta galactosidase small chain/ domain 5 (7.2%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.2%) Glycoside hydrolase family 2, catalytic domain (7.2%)" DYNKAYDFFEQYLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" KFGEAIFGADKVLSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" NENLPHRQDFCYVR EVHIEGYTPEDKK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0034599 (33.3%) GO:0005829 (33.3%) GO:0005506 (33.3%) cellular response to oxidative stress (33.3%) cytosol (33.3%) iron ion binding (33.3%) "IPR007457 (50%) IPR036766 (50%)" "Fe(II) trafficking protein YggX (50%) Fe(II) trafficking protein YggX superfamily (50%)" RLTDSEVFGFAQINSEHCR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (19.9%) GO:0005737 (19.9%) "GO:0004642 (19.9%) GO:0005524 (19.9%) GO:0046872 (19.9%)" 'de novo' IMP biosynthetic process (19.9%) cytoplasm (19.9%) "phosphoribosylformylglycinamidine synthase activity (19.9%) ATP binding (19.9%) metal ion binding (19.9%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" SVEELNTELLNLLR Bacteria Bacteria "GO:0006412 (33%) GO:0000027 (0.1%) GO:0002181 (0.1%)" "GO:0022625 (32.8%) GO:0005840 (0.7%) GO:1990904 (0.2%)" "GO:0003735 (33%) GO:0019843 (0.1%)" "translation (33%) ribosomal large subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic large ribosomal subunit (32.8%) ribosome (0.7%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (33%) rRNA binding (0.1%)" "IPR001854 (25.3%) IPR036049 (25.3%) IPR050063 (25.2%)" "Large ribosomal subunit protein uL29 (25.3%) Large ribosomal subunit protein uL29 superfamily (25.3%) Universal ribosomal protein uL29 (25.2%)" DAEVVLVEGLVPTRK root "2.3.1.8 (99.8%) 2.3.-.- (0.1%) 2.3.1.222 (0.1%)" "phosphate acetyltransferase (99.8%) Acyltransferases (0.1%) phosphate propanoyltransferase (0.1%)" "GO:0006085 (28.5%) GO:0006083 (0%) GO:0019413 (0%)" "GO:0005737 (34.2%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0008959 (36.3%) GO:0016746 (0.4%) GO:0016407 (0.2%)" "acetyl-CoA biosynthetic process (28.5%) acetate metabolic process (0%) acetate biosynthetic process (0%)" "cytoplasm (34.2%) cytosol (0%) membrane (0%)" "phosphate acetyltransferase activity (36.3%) acyltransferase activity (0.4%) acetyltransferase activity (0.2%)" "IPR050500 (11.6%) IPR027417 (11.6%) IPR010766 (11.2%)" "Phosphate Acetyltransferase/Butyryltransferase (11.6%) P-loop containing nucleoside triphosphate hydrolase (11.6%) DRTGG (11.2%)" MVSFTGDKELLYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.1.173 (100%) 23S rRNA (guanine(2445)-N(2))-methyltransferase (100%) "GO:0003723 (33.3%) GO:0070043 (33.3%) GO:0008990 (28.6%)" "RNA binding (33.3%) rRNA (guanine-N7-)-methyltransferase activity (33.3%) rRNA (guanine-N2-)-methyltransferase activity (28.6%)" "IPR000241 (16.7%) IPR002052 (16.7%) IPR004114 (16.7%)" "Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain (16.7%) DNA methylase, N-6 adenine-specific, conserved site (16.7%) THUMP domain (16.7%)" SNKQIYVQIIDDLSGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.3%)" "GO:0003735 (24.9%) GO:0008097 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.3%)" "structural constituent of ribosome (24.9%) 5S rRNA binding (24.9%)" "IPR004389 (33.6%) IPR005484 (33.6%) IPR057268 (32.3%)" "Large ribosomal subunit protein uL18, bacteria (33.6%) Large ribosomal subunit protein uL18, bacterial/plantae/animalia (33.6%) Large ribosomal subunit protein uL18 (32.3%)" AIYDQIPEKLTINVDHLGLGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" AHSESTWVETERPISVEEAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000534 (20%) IPR005986 (20%) IPR012080 (20%)" "Semialdehyde dehydrogenase, NAD-binding (20%) Aspartate-semialdehyde dehydrogenase, beta-type (20%) Aspartate-semialdehyde dehydrogenase (20%)" GLFLIDKEGVVR root "1.11.1.24 (50%) 1.11.1.- (30%) 1.11.1.15 (20%)" "thioredoxin-dependent peroxiredoxin (50%) Peroxidases (30%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (20%)" "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" GQPIHYLPTYR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0030145 (25%) GO:0070006 (25%)" proteolysis (25%) cytosol (25%) "manganese ion binding (25%) metalloaminopeptidase activity (25%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" NATLAITAVENQLEAATTTAHEKEFFPNVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (47.5%) IPR024302 (47.5%) IPR041662 (4.9%)" "Tetratricopeptide-like helical domain superfamily (47.5%) SusD-like (47.5%) SusD-like 2 (4.9%)" SDIQDKELILR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "IPR011990 (54.5%) IPR019734 (45.5%)" "Tetratricopeptide-like helical domain superfamily (54.5%) Tetratricopeptide repeat (45.5%)" LTTKECELLSLLCAHANEILER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" GELPLDNLCIATPDVGGTKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" EKPQQGEVLAVGPGRR Actinomycetota Bacteria Bacillati Actinomycetota GO:0051085 (0.5%) GO:0005737 (14.7%) "GO:0005524 (17%) GO:0044183 (17%) GO:0046872 (17%)" obsolete chaperone cofactor-dependent protein refolding (0.5%) cytoplasm (14.7%) "ATP binding (17%) protein folding chaperone (17%) metal ion binding (17%)" "IPR011032 (25.7%) IPR020818 (25.7%) IPR037124 (25.7%)" "GroES-like superfamily (25.7%) GroES chaperonin family (25.7%) GroES chaperonin superfamily (25.7%)" AFLPGSLVDVRPVR root 2.7.4.25 (100%) (d)CMP kinase (100%) "GO:0006412 (24.8%) GO:0006220 (0%) GO:0000028 (0%)" "GO:0022627 (24.6%) GO:0005840 (0.4%) GO:1990904 (0.2%)" "GO:0003735 (24.8%) GO:0003729 (24.8%) GO:0016853 (0.1%)" "translation (24.8%) pyrimidine nucleotide metabolic process (0%) ribosomal small subunit assembly (0%)" "cytosolic small ribosomal subunit (24.6%) ribosome (0.4%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (24.8%) mRNA binding (24.8%) isomerase activity (0.1%)" "IPR003029 (20.1%) IPR050437 (20.1%) IPR012340 (20.1%)" "S1 domain (20.1%) Small ribosomal subunit protein bS1-like (20.1%) Nucleic acid-binding, OB-fold (20.1%)" EGVCGSDGLNMNGK root "1.3.5.1 (99.6%) 1.3.99.1 (0.3%) 1.3.5.4 (0.1%)" "succinate dehydrogenase (99.6%) Deleted entry (0.3%) Transferred entry: 1.3.5.1 (0.1%)" "GO:0022904 (12.6%) GO:0006099 (12.5%) GO:0009060 (0.1%)" "GO:0005743 (0%) GO:0005886 (0%) GO:0016020 (0%)" "GO:0009055 (12.6%) GO:0051539 (12.3%) GO:0046872 (12.3%)" "respiratory electron transport chain (12.6%) tricarboxylic acid cycle (12.5%) aerobic respiration (0.1%)" "mitochondrial inner membrane (0%) plasma membrane (0%) membrane (0%)" "electron transfer activity (12.6%) 4 iron, 4 sulfur cluster binding (12.3%) metal ion binding (12.3%)" "IPR025192 (11.3%) IPR012675 (11.3%) IPR036010 (11.3%)" "Succinate dehydogenase/fumarate reductase N-terminal (11.3%) Beta-grasp domain superfamily (11.3%) 2Fe-2S ferredoxin-like superfamily (11.3%)" IQAIHFDATAQLEAFIQKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003489 (50%) IPR036567 (50%)" "Ribosome hibernation promoting factor/RaiA (50%) Ribosome hibernation promotion factor-like (50%)" YLSLLPYTDRHQ Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (24.8%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (24.8%) GO:0005840 (0.5%) GO:0005737 (0%)" "GO:0003735 (24.8%) GO:0070181 (24.8%) GO:0019843 (0%)" "translation (24.8%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.8%) ribosome (0.5%) cytoplasm (0%)" "structural constituent of ribosome (24.8%) small ribosomal subunit rRNA binding (24.8%) rRNA binding (0%)" "IPR001648 (33.3%) IPR018275 (33.3%) IPR036870 (33.3%)" "Small ribosomal subunit protein bS18 (33.3%) Small ribosomal subunit protein bS18, conserved site (33.3%) Small ribosomal subunit protein bS18 superfamily (33.3%)" KGEGIHHIAFAVPDVQAALNEAEEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (43.8%) "GO:0004493 (43.8%) GO:0016829 (6.3%) GO:0051213 (6.3%)" L-methylmalonyl-CoA metabolic process (43.8%) "methylmalonyl-CoA epimerase activity (43.8%) lyase activity (6.3%) dioxygenase activity (6.3%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" QYKEELFNLR Bacteria Bacteria GO:0006412 (33%) "GO:0022625 (33%) GO:0005840 (1.1%)" GO:0003735 (33%) translation (33%) "cytosolic large ribosomal subunit (33%) ribosome (1.1%)" structural constituent of ribosome (33%) "IPR001854 (25.6%) IPR036049 (25.6%) IPR050063 (25.6%)" "Large ribosomal subunit protein uL29 (25.6%) Large ribosomal subunit protein uL29 superfamily (25.6%) Universal ribosomal protein uL29 (25.6%)" SCGFSAQAVQALAACGER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006879 (0.3%) GO:0016226 (0.3%) GO:0045454 (0.3%)" "GO:0005737 (23.9%) GO:0005829 (0.3%) GO:1990229 (0.3%)" "GO:0015036 (24.8%) GO:0046872 (24.8%) GO:0051537 (24.8%)" "intracellular iron ion homeostasis (0.3%) iron-sulfur cluster assembly (0.3%) cell redox homeostasis (0.3%)" "cytoplasm (23.9%) cytosol (0.3%) iron-sulfur cluster assembly complex (0.3%)" "disulfide oxidoreductase activity (24.8%) metal ion binding (24.8%) 2 iron, 2 sulfur cluster binding (24.8%)" "IPR002109 (20%) IPR004480 (20%) IPR014434 (20%)" "Glutaredoxin (20%) Monothiol glutaredoxin-related (20%) Monothiol glutaredoxin (20%)" AKELEVIVAER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" GIELLNQENTGSISGDKGGTHVWWDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" NPDACIGCASCGLVCPDGCLTIYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.7.3 (50%) 1.97.1.12 (50%)" "2-oxoglutarate synthase (50%) photosystem I (50%)" "GO:0046872 (47.4%) GO:0051539 (47.4%) GO:0016491 (5.3%)" "metal ion binding (47.4%) 4 iron, 4 sulfur cluster binding (47.4%) oxidoreductase activity (5.3%)" "IPR017896 (33.3%) IPR017900 (33.3%) IPR050572 (33.3%)" "4Fe-4S ferredoxin-type, iron-sulphur binding domain (33.3%) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (33.3%) Iron-Sulfur Ferredoxin (33.3%)" VNPVIPEVMNQIAYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.3%) IPR008948 (14.3%) IPR018951 (14.3%)" "Fumarate lyase family (14.3%) L-Aspartase-like (14.3%) Fumarase C, C-terminal (14.3%)" ANATAPAINVIETDK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" SQAEMVGDNYDKIEQVAAVSANNDPTIGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (18.4%) GO:0005737 (13.6%) "GO:0005524 (18.4%) GO:0140662 (18.4%) GO:0016853 (17.6%)" protein refolding (18.4%) cytoplasm (13.6%) "ATP binding (18.4%) ATP-dependent protein folding chaperone (18.4%) isomerase activity (17.6%)" "IPR001844 (17.7%) IPR002423 (17.7%) IPR027409 (16.9%)" "Chaperonin Cpn60/GroEL (17.7%) Chaperonin Cpn60/GroEL/TCP-1 family (17.7%) GroEL-like apical domain superfamily (16.9%)" AVAEGASKVDGAEVVVK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.6.5.2 (100%) NAD(P)H dehydrogenase (quinone) (100%) GO:0006979 (0.2%) "GO:0016020 (16.2%) GO:0005829 (0.2%) GO:0032991 (0.2%)" "GO:0010181 (16.3%) GO:0050660 (14.5%) GO:0050661 (14.5%)" response to oxidative stress (0.2%) "membrane (16.2%) cytosol (0.2%) protein-containing complex (0.2%)" "FMN binding (16.3%) flavin adenine dinucleotide binding (14.5%) NADP binding (14.5%)" "IPR008254 (20.8%) IPR029039 (20.8%) IPR005025 (20%)" "Flavodoxin/nitric oxide synthase (20.8%) Flavoprotein-like superfamily (20.8%) NADPH-dependent FMN reductase-like domain (20%)" VNQIGTLSETLDAIEMAHR Pseudomonadati Bacteria Pseudomonadati 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.8%) "GO:0000015 (16.8%) GO:0005576 (16.8%) GO:0009986 (16.2%)" "GO:0000287 (16.8%) GO:0004634 (16.8%)" glycolytic process (16.8%) "phosphopyruvate hydratase complex (16.8%) extracellular region (16.8%) cell surface (16.2%)" "magnesium ion binding (16.8%) phosphopyruvate hydratase activity (16.8%)" "IPR000941 (16.8%) IPR020809 (16.8%) IPR020810 (16.8%)" "Enolase (16.8%) Enolase, conserved site (16.8%) Enolase, C-terminal TIM barrel domain (16.8%)" RLGNAVDPFSTIEK Pseudomonadati Bacteria Pseudomonadati 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.3%) GO:0005737 (13.9%) "GO:0004822 (14.4%) GO:0005524 (14.4%) GO:0000049 (14.3%)" isoleucyl-tRNA aminoacylation (14.3%) cytoplasm (13.9%) "isoleucine-tRNA ligase activity (14.4%) ATP binding (14.4%) tRNA binding (14.3%)" "IPR014729 (12.6%) IPR023586 (12.6%) IPR002300 (12.5%)" "Rossmann-like alpha/beta/alpha sandwich fold (12.6%) Isoleucine-tRNA ligase, type 2 (12.6%) Aminoacyl-tRNA synthetase, class Ia (12.5%)" VLQLQFIDPDVR root GO:0005829 (0.7%) "GO:0016787 (98.6%) GO:0016788 (0.7%)" cytosol (0.7%) "hydrolase activity (98.6%) hydrolase activity, acting on ester bonds (0.7%)" "IPR008886 (33.8%) IPR029058 (33.4%) IPR022987 (32.8%)" "Uncharacterised protein family UPF0227/Esterase YqiA (33.8%) Alpha/Beta hydrolase fold (33.4%) Uncharacterised protein family UPF0227 (32.8%)" EKPLKGEVVAVGHGTKDEEMVLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0051085 (0.8%) GO:0005737 (15.6%) "GO:0005524 (16.7%) GO:0044183 (16.7%) GO:0046872 (16.7%)" obsolete chaperone cofactor-dependent protein refolding (0.8%) cytoplasm (15.6%) "ATP binding (16.7%) protein folding chaperone (16.7%) metal ion binding (16.7%)" "IPR011032 (33.3%) IPR020818 (33.3%) IPR037124 (33.3%)" "GroES-like superfamily (33.3%) GroES chaperonin family (33.3%) GroES chaperonin superfamily (33.3%)" MNIYTVGAATQGLSNYLNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.2 (57.1%) 5.4.2.- (42.9%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (57.1%) Phosphotransferases (phosphomutases) (42.9%)" "GO:0005975 (24.2%) GO:0006166 (24.2%)" "GO:0000287 (24.2%) GO:0008973 (24.2%) GO:0004614 (3.1%)" "carbohydrate metabolic process (24.2%) purine ribonucleoside salvage (24.2%)" "magnesium ion binding (24.2%) phosphopentomutase activity (24.2%) phosphoglucomutase activity (3.1%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" VIPEENKIIGYSTK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.5%) GO:0006516 (19.5%)" GO:0005829 (19.5%) "GO:0000224 (19.5%) GO:0030246 (19.5%) GO:0016798 (2.4%)" "carbohydrate metabolic process (19.5%) glycoprotein catabolic process (19.5%)" cytosol (19.5%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.5%) carbohydrate binding (19.5%) hydrolase activity, acting on glycosyl bonds (2.4%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" NVPCTVIEAGPCVVTQVK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.3%)" "GO:0003735 (24.9%) GO:0019843 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.3%)" "structural constituent of ribosome (24.9%) rRNA binding (24.9%)" "IPR009000 (25.3%) IPR000597 (25.1%) IPR019927 (25.1%)" "Translation protein, beta-barrel domain superfamily (25.3%) Large ribosomal subunit protein uL3 (25.1%) Large ribosomal subunit protein uL3, bacteria/organella (25.1%)" MLSSMQEER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" EIWDMVGEYMEFTKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.6.5.- (61.5%) 3.6.-.- (23.1%) 2.7.-.- (15.4%)" "Acting on GTP; involved in cellular and subcellular movement (61.5%) Acting on acid anhydrides (23.1%) Transferring phosphorus-containing groups (15.4%)" GO:0005737 (32%) "GO:0003924 (32%) GO:0005525 (32%) GO:0016301 (2%)" cytoplasm (32%) "GTPase activity (32%) GTP binding (32%) kinase activity (2%)" "IPR005129 (50%) IPR027417 (50%)" "SIMIBI class G3E GTPase, ArgK/MeaB (50%) P-loop containing nucleoside triphosphate hydrolase (50%)" VAKYPSMEEAMPEIYKELDALQTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" HADNTLTFGPR root "GO:0002181 (23.5%) GO:0006412 (0.5%) GO:0000027 (0.2%)" "GO:0022625 (23.5%) GO:0005840 (2.6%) GO:1990904 (0.5%)" "GO:0003735 (24%) GO:0019843 (23.8%) GO:0070180 (0.2%)" "cytoplasmic translation (23.5%) translation (0.5%) ribosomal large subunit assembly (0.2%)" "cytosolic large ribosomal subunit (23.5%) ribosome (2.6%) ribonucleoprotein complex (0.5%)" "structural constituent of ribosome (24%) rRNA binding (23.8%) large ribosomal subunit rRNA binding (0.2%)" "IPR020040 (19.9%) IPR036789 (19.9%) IPR000702 (19.5%)" "Large ribosomal subunit protein uL6, alpha-beta domain (19.9%) Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily (19.9%) Large ribosomal subunit protein uL6-like (19.5%)" LGVAPLTSMYLFGENSHTR TALVFGQMNEPPGAR root "7.1.2.2 (98.9%) 3.6.3.14 (0.9%) 7.2.2.1 (0.1%)" "H(+)-transporting two-sector ATPase (98.9%) Transferred entry: 7.1.2.2 (0.9%) Na(+)-transporting two-sector ATPase (0.1%)" GO:0042776 (0.2%) "GO:0045259 (23.2%) GO:0005886 (22.3%) GO:0005743 (0.2%)" "GO:0005524 (23.2%) GO:0046933 (23.2%) GO:0016787 (6.3%)" proton motive force-driven mitochondrial ATP synthesis (0.2%) "proton-transporting ATP synthase complex (23.2%) plasma membrane (22.3%) mitochondrial inner membrane (0.2%)" "ATP binding (23.2%) proton-transporting ATP synthase activity, rotational mechanism (23.2%) hydrolase activity (6.3%)" "IPR000194 (10.1%) IPR050053 (10.1%) IPR005722 (10.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%) ATPase alpha/beta chains (10.1%) ATP synthase, F1 complex, beta subunit (10.1%)" VVINKDTTTIIDGVGEEAAIQGR root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (16.9%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (16.6%) GO:1990220 (0.1%) GO:0005829 (0%)" "GO:0140662 (16.9%) GO:0005524 (16.8%) GO:0016853 (16.8%)" "protein refolding (16.9%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (16.6%) GroEL-GroES complex (0.1%) cytosol (0%)" "ATP-dependent protein folding chaperone (16.9%) ATP binding (16.8%) isomerase activity (16.8%)" "IPR001844 (16.8%) IPR027409 (16.8%) IPR002423 (16.7%)" "Chaperonin Cpn60/GroEL (16.8%) GroEL-like apical domain superfamily (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%)" AALSNTFGFGGHNACAIVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" SCRPYLESDATCPVSVYGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.133 (100%) dTDP-4-dehydrorhamnose reductase (100%) GO:0019305 (33.3%) GO:0005829 (33.3%) GO:0008831 (33.3%) dTDP-rhamnose biosynthetic process (33.3%) cytosol (33.3%) dTDP-4-dehydrorhamnose reductase activity (33.3%) "IPR005913 (33.3%) IPR029903 (33.3%) IPR036291 (33.3%)" "dTDP-4-dehydrorhamnose reductase family (33.3%) RmlD-like substrate binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" LSDLVEDEKQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR012912 (50%) IPR024047 (50%)" "Plasmid pRiA4b, Orf3-like domain (50%) MM3350-like superfamily (50%)" AIPNYNVMGLAK root "1.3.1.9 (99.8%) 1.3.1.10 (0.2%)" "enoyl-[acyl-carrier-protein] reductase (NADH) (99.8%) enoyl-[acyl-carrier-protein] reductase (NADPH, Si-specific) (0.2%)" "GO:0006633 (36.6%) GO:0009102 (25.5%) GO:0030497 (0.1%)" "GO:0005829 (0%) GO:0005886 (0%) GO:0016020 (0%)" "GO:0004318 (36.7%) GO:0016491 (0.2%) GO:0042802 (0.1%)" "fatty acid biosynthetic process (36.6%) biotin biosynthetic process (25.5%) fatty acid elongation (0.1%)" "cytosol (0%) plasma membrane (0%) membrane (0%)" "enoyl-[acyl-carrier-protein] reductase (NADH) activity (36.7%) oxidoreductase activity (0.2%) identical protein binding (0.1%)" "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" VEEMLDTIQDTLSDLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR009000 (9.2%) IPR012947 (9.2%) IPR018163 (9.2%)" "Translation protein, beta-barrel domain superfamily (9.2%) Threonyl/alanyl tRNA synthetase, SAD (9.2%) Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily (9.2%)" TGAAIHPGYGFLSENADFAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.3.4.14 (80.3%) 6.4.1.7 (12.1%) 6.4.1.1 (4.5%)" "biotin carboxylase (80.3%) 2-oxoglutarate carboxylase (12.1%) pyruvate carboxylase (4.5%)" GO:2001295 (17.8%) "GO:0005524 (21.7%) GO:0046872 (21.4%) GO:0003989 (17.5%)" malonyl-CoA biosynthetic process (17.8%) "ATP binding (21.7%) metal ion binding (21.4%) acetyl-CoA carboxylase activity (17.5%)" "IPR005479 (12.6%) IPR005481 (12.6%) IPR011764 (12.6%)" "Carbamoyl phosphate synthase, ATP-binding domain (12.6%) Biotin carboxylase-like, N-terminal domain (12.6%) Biotin carboxylation domain (12.6%)" TKGGMIVDVFGIEAFLPGSQIDVKPIR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006412 (24.7%) GO:0008033 (0%)" "GO:0022627 (24.2%) GO:0005840 (0.5%) GO:1990904 (0.5%)" "GO:0003729 (24.8%) GO:0003735 (24.8%) GO:0004654 (0.1%)" "translation (24.7%) tRNA processing (0%)" "cytosolic small ribosomal subunit (24.2%) ribosome (0.5%) ribonucleoprotein complex (0.5%)" "mRNA binding (24.8%) structural constituent of ribosome (24.8%) polyribonucleotide nucleotidyltransferase activity (0.1%)" "IPR003029 (23.6%) IPR050437 (23.6%) IPR012340 (23.5%)" "S1 domain (23.6%) Small ribosomal subunit protein bS1-like (23.6%) Nucleic acid-binding, OB-fold (23.5%)" TAQLAIQGPK Bacteria Bacteria 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (15.5%) GO:0032259 (10.4%) GO:0006546 (0.4%)" "GO:0005829 (15.8%) GO:0005960 (15.8%)" "GO:0004047 (15.8%) GO:0008483 (15.8%) GO:0008168 (10.4%)" "glycine decarboxylation via glycine cleavage system (15.5%) methylation (10.4%) glycine catabolic process (0.4%)" "cytosol (15.8%) glycine cleavage complex (15.8%)" "aminomethyltransferase activity (15.8%) transaminase activity (15.8%) methyltransferase activity (10.4%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" HTIQSEGFAFPGHTEYIEQR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.262 (100%) 4-hydroxythreonine-4-phosphate dehydrogenase (100%) "GO:0046872 (33.3%) GO:0051287 (33.3%) GO:0016491 (16.7%)" "metal ion binding (33.3%) NAD binding (33.3%) oxidoreductase activity (16.7%)" IPR005255 (100%) PdxA family (100%) DYVTFGLNEEDAPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" AGLNEINLPELQAGSSIMPAK root 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006531 (21%) GO:0006099 (20.5%) GO:0006533 (0%)" "GO:0005829 (21%) GO:0016020 (0%)" "GO:0008797 (21%) GO:0042802 (16.1%) GO:0016829 (0.2%)" "aspartate metabolic process (21%) tricarboxylic acid cycle (20.5%) L-aspartate catabolic process (0%)" "cytosol (21%) membrane (0%)" "aspartate ammonia-lyase activity (21%) identical protein binding (16.1%) lyase activity (0.2%)" "IPR008948 (12.6%) IPR022761 (12.6%) IPR051546 (12.6%)" "L-Aspartase-like (12.6%) Fumarate lyase, N-terminal (12.6%) Class-II Aspartate Ammonia-Lyase (12.6%)" RLDMLNEELSDKER root "GO:0034605 (17.6%) GO:0042026 (14.9%) GO:0006508 (0.1%)" "GO:0005829 (14%) GO:0005737 (3.8%) GO:0016020 (0.1%)" "GO:0005524 (17.6%) GO:0016887 (17.6%) GO:0042802 (14%)" "cellular response to heat (17.6%) protein refolding (14.9%) proteolysis (0.1%)" "cytosol (14%) cytoplasm (3.8%) membrane (0.1%)" "ATP binding (17.6%) ATP hydrolysis activity (17.6%) identical protein binding (14%)" "IPR027417 (9.1%) IPR050130 (8.9%) IPR041546 (8.8%)" "P-loop containing nucleoside triphosphate hydrolase (9.1%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.9%) ClpA/ClpB, AAA lid domain (8.8%)" ADVSAEDYMR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10.4%) IPR006203 (10.4%) IPR006204 (10.4%)" "Galactokinase (10.4%) GHMP kinase, ATP-binding, conserved site (10.4%) GHMP kinase N-terminal domain (10.4%)" KGKDIPEADRDYYLER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.3.5.1 (94.4%) 1.3.5.4 (5.6%)" "succinate dehydrogenase (94.4%) Transferred entry: 1.3.5.1 (5.6%)" GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (13.8%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (13.8%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" YFYAEGYQER Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" ILSDPEASDNDKYVALTFLR Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (19.7%) "GO:0046872 (20.3%) GO:0051539 (20.3%) GO:0004333 (19.7%)" tricarboxylic acid cycle (19.7%) "metal ion binding (20.3%) 4 iron, 4 sulfur cluster binding (20.3%) fumarate hydratase activity (19.7%)" "IPR004646 (17%) IPR051208 (17%) IPR004647 (16.6%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (17%) Class-I Fumarase/Tartrate Dehydratase (17%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.6%)" NVLDDREYISINER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (25%) "GO:0036440 (13.9%) GO:0046912 (11.1%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (25%) "citrate synthase activity (13.9%) acyltransferase activity, acyl groups converted into alkyl on transfer (11.1%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" KSETFSTAADNQTEVTIHVLQGERPMAAQNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005524 (33.3%) GO:0051082 (33.3%) GO:0140662 (33.3%)" "ATP binding (33.3%) unfolded protein binding (33.3%) ATP-dependent protein folding chaperone (33.3%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" GKTVAVSGFGNVAWGAVTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (25.6%) GO:0005829 (25.6%) "GO:0004354 (25.6%) GO:0000166 (23.3%)" glutamate biosynthetic process (25.6%) cytosol (25.6%) "glutamate dehydrogenase (NADP+) activity (25.6%) nucleotide binding (23.3%)" "IPR006095 (11.3%) IPR006096 (11.3%) IPR006097 (11.3%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.3%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.3%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.3%)" FTDASELVCVTLLANKEGVDLTNLGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016787 (100%) hydrolase activity (100%) "IPR001466 (20%) IPR005180 (20%) IPR012338 (20%)" "Beta-lactamase-related (20%) Domain of unknown function DUF302 (20%) Beta-lactamase/transpeptidase-like (20%)" AGEVHAIMGPNGSGK root "2.8.1.7 (18.2%) 3.6.1.15 (18.2%) 3.6.1.3 (18.2%)" "cysteine desulfurase (18.2%) nucleoside-triphosphate phosphatase (18.2%) Deleted entry (18.2%)" "GO:0016226 (0.2%) GO:0006534 (0.1%)" "GO:0005737 (4%) GO:0005886 (2.8%) GO:0009507 (0.1%)" "GO:0005524 (46.2%) GO:0016887 (46.2%) GO:0030170 (0.1%)" "iron-sulfur cluster assembly (0.2%) cysteine metabolic process (0.1%)" "cytoplasm (4%) plasma membrane (2.8%) chloroplast (0.1%)" "ATP binding (46.2%) ATP hydrolysis activity (46.2%) pyridoxal phosphate binding (0.1%)" "IPR003439 (22.7%) IPR010230 (22.7%) IPR027417 (22.6%)" "ABC transporter-like, ATP-binding domain (22.7%) FeS cluster assembly SUF system, ATPase SufC (22.7%) P-loop containing nucleoside triphosphate hydrolase (22.6%)" NLEDAHTAEADTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.7.7.7 (50%) 3.1.11.- (37.5%) 3.6.4.12 (12.5%)" "DNA-directed DNA polymerase (50%) Exodeoxyribonucleases producing 5'-phosphomonoesters (37.5%) DNA helicase (12.5%)" GO:0045004 (24.5%) GO:0005829 (24.5%) "GO:0003676 (24.5%) GO:0008408 (24.5%) GO:0003887 (1.3%)" DNA replication proofreading (24.5%) cytosol (24.5%) "nucleic acid binding (24.5%) 3'-5' exonuclease activity (24.5%) DNA-directed DNA polymerase activity (1.3%)" "IPR012337 (25%) IPR013520 (25%) IPR036397 (25%)" "Ribonuclease H-like superfamily (25%) Ribonuclease H-like domain (25%) Ribonuclease H superfamily (25%)" NWDDFKGFLKGEVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.1 (72.7%) 1.2.7.- (27.3%)" "pyruvate synthase (72.7%) With an iron-sulfur protein as acceptor (27.3%)" "GO:0006979 (15%) GO:0022900 (15%) GO:0044281 (9.8%)" "GO:0005506 (15%) GO:0030976 (15%) GO:0051539 (15%)" "response to oxidative stress (15%) electron transport chain (15%) small molecule metabolic process (9.8%)" "iron ion binding (15%) thiamine pyrophosphate binding (15%) 4 iron, 4 sulfur cluster binding (15%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" LGMQGETAAQR Collinsella aerofaciens Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella aerofaciens MGSENALEEFKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR024492 (100%) CT_309/TC_0583-like (100%) RSDVYDLRPLLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.6.99.2 (100%) pyridoxine 5'-phosphate synthase (100%) GO:0008615 (33.3%) GO:0005829 (33.3%) GO:0033856 (33.3%) pyridoxine biosynthetic process (33.3%) cytosol (33.3%) pyridoxine 5'-phosphate synthase activity (33.3%) "IPR004569 (33.3%) IPR013785 (33.3%) IPR036130 (33.3%)" "Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ (33.3%) Aldolase-type TIM barrel (33.3%) Pyridoxine 5'-phosphate synthase (33.3%)" AGSATVLGALATQVENMIVSSADLSNSDKTDGFLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.2.1.1 (95.5%) 2.2.1.- (4.5%)" "transketolase (95.5%) Transketolases and transaldolases (4.5%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" SYHVDIVDTQTK Bacteria Bacteria "4.1.1.70 (66.7%) 6.3.4.14 (33.3%)" "Transferred entry: 7.2.4.5 (66.7%) biotin carboxylase (33.3%)" GO:2001295 (16.7%) "GO:0016829 (33.3%) GO:0005524 (16.7%) GO:0016874 (16.7%)" malonyl-CoA biosynthetic process (16.7%) "lyase activity (33.3%) ATP binding (16.7%) ligase activity (16.7%)" "IPR000089 (30.2%) IPR011053 (30.2%) IPR050709 (29.1%)" "Biotin/lipoyl attachment (30.2%) Single hybrid motif (30.2%) Biotin Carboxyl Carrier/Decarboxylase Components (29.1%)" IEGGEWLVETVQMLTER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.1.2.11 (100%) 3-methyl-2-oxobutanoate hydroxymethyltransferase (100%) "GO:0015940 (18.8%) GO:0032259 (11.8%)" "GO:0005737 (18.8%) GO:0005829 (0.3%) GO:0016020 (0.3%)" "GO:0000287 (18.8%) GO:0003864 (18.8%) GO:0008168 (11.8%)" "pantothenate biosynthetic process (18.8%) methylation (11.8%)" "cytoplasm (18.8%) cytosol (0.3%) membrane (0.3%)" "magnesium ion binding (18.8%) 3-methyl-2-oxobutanoate hydroxymethyltransferase activity (18.8%) methyltransferase activity (11.8%)" "IPR003700 (33.3%) IPR015813 (33.3%) IPR040442 (33.3%)" "Ketopantoate hydroxymethyltransferase (33.3%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (33.3%) Pyruvate kinase-like domain superfamily (33.3%)" LLSPVIGAIYGSSIQQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006508 (33.3%) GO:0005829 (33.3%) GO:0008237 (33.3%) proteolysis (33.3%) cytosol (33.3%) metallopeptidase activity (33.3%) "IPR002510 (16.7%) IPR035068 (16.7%) IPR036059 (16.7%)" "Metalloprotease TldD/E, N-terminal domain (16.7%) Metalloprotease TldD/PmbA, N-terminal (16.7%) Metalloprotease TldD/PmbA superfamily (16.7%)" LAAIVTHVADAR Bacteria Bacteria "2.5.1.49 (42.4%) 4.4.1.11 (36.4%) 2.5.1.47 (15.2%)" "O-acetylhomoserine aminocarboxypropyltransferase (42.4%) methionine gamma-lyase (36.4%) cysteine synthase (15.2%)" "GO:0006535 (13.8%) GO:0019346 (13.8%) GO:0071269 (13.8%)" GO:0005737 (13.8%) "GO:0003961 (13.8%) GO:0004124 (13.8%) GO:0030170 (13.8%)" "cysteine biosynthetic process from serine (13.8%) transsulfuration (13.8%) L-homocysteine biosynthetic process (13.8%)" cytoplasm (13.8%) "O-acetylhomoserine aminocarboxypropyltransferase activity (13.8%) cysteine synthase activity (13.8%) pyridoxal phosphate binding (13.8%)" "IPR000277 (20%) IPR006235 (20%) IPR015421 (20%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (20%) O-acetylhomoserine/O-acetylserine sulfhydrylase (20%) Pyridoxal phosphate-dependent transferase, major domain (20%)" SAQTPFLVFSGTNSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11%) GO:0006164 (11%) GO:0009156 (11%)" "GO:0002189 (11%) GO:0005737 (11%)" "GO:0004749 (11.5%) GO:0016301 (11.5%) GO:0000287 (11%)" "5-phosphoribose 1-diphosphate biosynthetic process (11%) purine nucleotide biosynthetic process (11%) ribonucleoside monophosphate biosynthetic process (11%)" "ribose phosphate diphosphokinase complex (11%) cytoplasm (11%)" "ribose phosphate diphosphokinase activity (11.5%) kinase activity (11.5%) magnesium ion binding (11%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" VINLDKESEPDIYNAIK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.8%) GO:0005829 (17.8%) "GO:0004612 (17.8%) GO:0005524 (17.8%) GO:0046872 (17%)" gluconeogenesis (17.8%) cytosol (17.8%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.8%) ATP binding (17.8%) metal ion binding (17%)" "IPR001272 (25.4%) IPR013035 (25.4%) IPR015994 (24.8%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.4%) Phosphoenolpyruvate carboxykinase, C-terminal (25.4%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (24.8%)" TSAGALHTIPVCR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "2.1.1.- (96.7%) 2.1.1.185 (3.3%)" "Methyltransferases (96.7%) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (3.3%)" "GO:0032259 (20.1%) GO:0006396 (19.9%)" GO:0005829 (19.9%) "GO:0003723 (19.9%) GO:0008173 (19.9%) GO:0008168 (0.2%)" "methylation (20.1%) RNA processing (19.9%)" cytosol (19.9%) "RNA binding (19.9%) RNA methyltransferase activity (19.9%) methyltransferase activity (0.2%)" "IPR001537 (16.8%) IPR004441 (16.8%) IPR029026 (16.8%)" "tRNA/rRNA methyltransferase, SpoU type (16.8%) RNA methyltransferase TrmH (16.8%) tRNA (guanine-N1-)-methyltransferase, N-terminal (16.8%)" YGDGGTDINPLYR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 6.3.1.5 (100%) NAD(+) synthase (100%) "GO:0009435 (14.3%) GO:0006974 (0.1%) GO:0034355 (0.1%)" "GO:0005737 (14.3%) GO:0005829 (0.1%)" "GO:0003952 (14.4%) GO:0004359 (14.4%) GO:0005524 (14.4%)" "NAD+ biosynthetic process (14.3%) DNA damage response (0.1%) NAD+ biosynthetic process via the salvage pathway (0.1%)" "cytoplasm (14.3%) cytosol (0.1%)" "NAD+ synthase (glutamine-hydrolyzing) activity (14.4%) glutaminase activity (14.4%) ATP binding (14.4%)" "IPR003694 (25.6%) IPR014729 (25.6%) IPR022310 (25.6%)" "NAD(+) synthetase (25.6%) Rossmann-like alpha/beta/alpha sandwich fold (25.6%) NAD/GMP synthase (25.6%)" VVMTADAVK root "GO:0006412 (19.9%) GO:0006353 (0.1%) GO:0006417 (0.1%)" "GO:0005840 (20.2%) GO:1990904 (19.8%) GO:0022625 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.5%) GO:0001070 (0%)" "translation (19.9%) DNA-templated transcription termination (0.1%) regulation of translation (0.1%)" "ribosome (20.2%) ribonucleoprotein complex (19.8%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.5%) RNA-binding transcription regulator activity (0%)" "IPR002136 (33.2%) IPR023574 (33.2%) IPR013005 (32.9%)" "Large ribosomal subunit protein uL4 (33.2%) Large ribosomal subunit protein uL4 domain superfamily (33.2%) Large ribosomal subunit protein uL4-like (32.9%)" SFVFDTCKAEANWNMTNFVNDQIELVKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (16.7%) IPR014729 (16.7%) IPR017926 (16.7%)" "GMP synthase, C-terminal (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Glutamine amidotransferase (16.7%)" MMGVDFDKIYYESQTYLEGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.19 (100%) arginine--tRNA ligase (100%) GO:0006420 (25.2%) GO:0005737 (24.3%) "GO:0004814 (25.2%) GO:0005524 (25.2%)" arginyl-tRNA aminoacylation (25.2%) cytoplasm (24.3%) "arginine-tRNA ligase activity (25.2%) ATP binding (25.2%)" "IPR001278 (12.8%) IPR014729 (12.8%) IPR035684 (12.8%)" "Arginine-tRNA ligase (12.8%) Rossmann-like alpha/beta/alpha sandwich fold (12.8%) Arginyl-tRNA synthetase, catalytic core domain (12.8%)" MSGAGMMDCK root GO:0070125 (3.8%) "GO:0005737 (37.6%) GO:0005739 (5.1%) GO:0009507 (5.1%)" "GO:0003746 (43.3%) GO:0003729 (5.1%)" mitochondrial translational elongation (3.8%) "cytoplasm (37.6%) mitochondrion (5.1%) chloroplast (5.1%)" "translation elongation factor activity (43.3%) mRNA binding (5.1%)" "IPR001816 (18.5%) IPR009060 (18.5%) IPR014039 (18.5%)" "Translation elongation factor EFTs/EF1B (18.5%) UBA-like superfamily (18.5%) Translation elongation factor EFTs/EF1B, dimerisation (18.5%)" LNVSVNEKGEPVYELSYK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.22 (100%) alpha-galactosidase (100%) "GO:0030246 (72.7%) GO:0016787 (22.7%) GO:0004557 (4.5%)" "carbohydrate binding (72.7%) hydrolase activity (22.7%) alpha-galactosidase activity (4.5%)" "IPR013785 (13.7%) IPR014718 (13.7%) IPR017853 (13.7%)" "Aldolase-type TIM barrel (13.7%) Glycoside hydrolase-type carbohydrate-binding (13.7%) Glycoside hydrolase superfamily (13.7%)" LIDSEHVINNYLKEGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (15.9%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (15.9%)" "IPR001114 (14.3%) IPR018220 (14.3%) IPR027417 (14.3%)" "Adenylosuccinate synthetase (14.3%) Adenylosuccinate synthase, GTP-binding site (14.3%) P-loop containing nucleoside triphosphate hydrolase (14.3%)" IVVNVDGLTDGSK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (24.7%) "GO:0022625 (24.7%) GO:0005840 (1.4%)" "GO:0003735 (24.7%) GO:0008097 (24.7%)" translation (24.7%) "cytosolic large ribosomal subunit (24.7%) ribosome (1.4%)" "structural constituent of ribosome (24.7%) 5S rRNA binding (24.7%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" GGDTVTLNETDLTQIPK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:1990451 (32.3%) GO:0009268 (0.3%) GO:0010447 (0.3%)" "GO:0042597 (34%) GO:0030288 (0.3%)" GO:0051082 (32.6%) "cellular stress response to acidic pH (32.3%) response to pH (0.3%) response to acidic pH (0.3%)" "periplasmic space (34%) outer membrane-bounded periplasmic space (0.3%)" unfolded protein binding (32.6%) "IPR010486 (33.9%) IPR038303 (33.9%) IPR028623 (32.2%)" "HNS-dependent expression A/B (33.9%) HNS-dependent expression A/B superfamily (33.9%) HNS-dependent expression B (32.2%)" NKNPLIILESADKQLLGQICAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0002181 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" cytoplasmic translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000702 (20%) IPR002358 (20%) IPR019906 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, conserved site (20%) Large ribosomal subunit protein uL6, bacteria (20%)" EIPIYKPSDR Pseudomonadati Bacteria Pseudomonadati "2.8.3.- (93.8%) 3.1.2.1 (6.3%)" "CoA-transferases (93.8%) acetyl-CoA hydrolase (6.3%)" "GO:0006083 (25%) GO:0006084 (24.8%)" "GO:0003986 (25%) GO:0008775 (25%) GO:0016740 (0.2%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (24.8%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%) transferase activity (0.2%)" "IPR003702 (16.7%) IPR037171 (16.7%) IPR046433 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) NagB/RpiA transferase-like (16.7%) Acetyl-CoA hydrolase/transferase (16.7%)" GVHFLSQQATELHEASR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.8.1.7 (100%) cysteine desulfurase (100%) GO:0006534 (32.1%) "GO:0030170 (32.1%) GO:0031071 (32.1%) GO:0016829 (2%)" cysteine metabolic process (32.1%) "pyridoxal phosphate binding (32.1%) cysteine desulfurase activity (32.1%) lyase activity (2%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" KGNVITSLELDPAKMEENNIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0016491 (70%) GO:0019164 (30%)" "oxidoreductase activity (70%) pyruvate synthase activity (30%)" "IPR002880 (20%) IPR009014 (20%) IPR029061 (20%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%) Thiamin diphosphate-binding fold (20%)" LNELLEFPTPFTYK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales GO:0034605 (0.2%) GO:0005829 (99.8%) cellular response to heat (0.2%) cytosol (99.8%) "IPR007454 (50%) IPR027471 (50%)" "Uncharacterised protein family UPF0250, YbeD-like (50%) YbeD-like domain superfamily (50%)" LVVDQEDADGRFATPEAK root "1.5.1.34 (54.2%) 1.-.-.- (45.8%)" "6,7-dihydropteridine reductase (54.2%) Oxidoreductases (45.8%)" GO:0046256 (27.9%) "GO:0005829 (27.9%) GO:0016020 (0.2%)" "GO:0046857 (27.7%) GO:0004155 (14.3%) GO:0016491 (0.7%)" 2,4,6-trinitrotoluene catabolic process (27.9%) "cytosol (27.9%) membrane (0.2%)" "oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor (27.7%) 6,7-dihydropteridine reductase activity (14.3%) oxidoreductase activity (0.7%)" "IPR000415 (26.2%) IPR029479 (25.8%) IPR050627 (24.2%)" "Nitroreductase-like (26.2%) Nitroreductase (25.8%) Nitroreductase/BluB (24.2%)" LKVTGYADSDTGSAAWNK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0016020 (100%) membrane (100%) "IPR006665 (33.3%) IPR036737 (33.3%) IPR050330 (33.3%)" "OmpA-like domain (33.3%) OmpA-like domain superfamily (33.3%) Bacterial Outer Membrane Structural/Functional (33.3%)" LYQMQEEGKLLFPAFNVNDSVTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.13.2.1 (97.6%) 3.3.1.1 (2.4%)" "adenosylhomocysteinase (97.6%) Transferred entry: 3.13.2.1 (2.4%)" "GO:0006730 (20%) GO:0033353 (20%) GO:0071269 (20%)" GO:0005829 (20%) "GO:0004013 (20%) GO:0016787 (0.2%)" "one-carbon metabolic process (20%) S-adenosylmethionine cycle (20%) L-homocysteine biosynthetic process (20%)" cytosol (20%) "adenosylhomocysteinase activity (20%) hydrolase activity (0.2%)" "IPR000043 (20%) IPR015878 (20%) IPR020082 (20%)" "Adenosylhomocysteinase-like (20%) S-adenosyl-L-homocysteine hydrolase, NAD binding domain (20%) S-adenosyl-L-homocysteine hydrolase, conserved site (20%)" EFVREWLMENGFQGK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (24.9%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (24.9%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR028923 (50.2%) IPR018236 (49.8%)" "SAICAR synthetase/ADE2, N-terminal (50.2%) SAICAR synthetase, conserved site (49.8%)" VRELDTYCEIVPYNKFPKGDETVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (12.5%) IPR004739 (12.5%) IPR014729 (12.5%)" "GMP synthase, C-terminal (12.5%) GMP synthase, glutamine amidotransferase (12.5%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" FLADYINGDTYYK root "3.1.6.- (45.8%) 2.7.1.- (29.2%) 2.7.1.162 (25%)" "Sulfuric ester hydrolases (45.8%) Phosphotransferases with an alcohol group as acceptor (29.2%) N-acetylhexosamine 1-kinase (25%)" "GO:0016740 (81.4%) GO:0016301 (9.7%) GO:0016787 (8.8%)" "transferase activity (81.4%) kinase activity (9.7%) hydrolase activity (8.8%)" "IPR002575 (33.3%) IPR011009 (33.3%) IPR050249 (33.3%)" "Aminoglycoside phosphotransferase (33.3%) Protein kinase-like domain superfamily (33.3%) Pseudomonas-type Homoserine Kinase (33.3%)" NSFNIASMSFDPEIIYNNIKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.103 (50%) 4.2.1.47 (50%)" "L-threonine 3-dehydrogenase (50%) GDP-mannose 4,6-dehydratase (50%)" GO:0006567 (48.8%) "GO:0008743 (48.8%) GO:0016829 (2.3%)" L-threonine catabolic process (48.8%) "L-threonine 3-dehydrogenase activity (48.8%) lyase activity (2.3%)" "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" EYQESILPAGAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.2.1.1 (96.6%) 2.2.1.- (3.4%)" "transketolase (96.6%) Transketolases and transaldolases (3.4%)" GO:0006098 (25.2%) GO:0005829 (25.2%) "GO:0004802 (25.2%) GO:0046872 (24.3%)" pentose-phosphate shunt (25.2%) cytosol (25.2%) "transketolase activity (25.2%) metal ion binding (24.3%)" "IPR009014 (12.8%) IPR033247 (12.8%) IPR055152 (12.8%)" "Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.8%) Transketolase family (12.8%) Transketolase-like, C-terminal domain (12.8%)" SELSDEDYKK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0005737 (16.2%) "GO:0005524 (19.7%) GO:0016887 (19.7%) GO:0051082 (19.7%)" cytoplasm (16.2%) "ATP binding (19.7%) ATP hydrolysis activity (19.7%) unfolded protein binding (19.7%)" "IPR001404 (16.9%) IPR019805 (16.9%) IPR020568 (16.9%)" "Heat shock protein Hsp90 family (16.9%) Heat shock protein Hsp90, conserved site (16.9%) Ribosomal protein uS5 domain 2-type superfamily (16.9%)" QAGAALAINQQIVPR root 2.7.7.73 (100%) sulfur carrier protein ThiS adenylyltransferase (100%) "GO:0009229 (9.1%) GO:0009228 (4.5%) GO:0052837 (4.5%)" "GO:0005829 (9.1%) GO:1902503 (4.5%) GO:1990228 (4.5%)" "GO:0008641 (9.1%) GO:0000166 (4.5%) GO:0004789 (4.5%)" "thiamine diphosphate biosynthetic process (9.1%) thiamine biosynthetic process (4.5%) thiazole biosynthetic process (4.5%)" "cytosol (9.1%) adenylyltransferase complex (4.5%) sulfurtransferase complex (4.5%)" "ubiquitin-like modifier activating enzyme activity (9.1%) nucleotide binding (4.5%) thiamine-phosphate diphosphorylase activity (4.5%)" "IPR003749 (24%) IPR010035 (23.8%) IPR012675 (23.8%)" "Sulfur carrier ThiS/MoaD-like (24%) ThiS, thiamine-biosynthesis (23.8%) Beta-grasp domain superfamily (23.8%)" SFSGKDQMVSPAVTGLIGDCYVNMGNTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016020 (100%) membrane (100%) "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" VLLMADSTSR root 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (21.7%) GO:0046034 (3.2%) GO:1902600 (0.1%)" GO:0005886 (0.1%) "GO:0005524 (24.9%) GO:0046961 (24.9%) GO:0046933 (21.7%)" "proton motive force-driven plasma membrane ATP synthesis (21.7%) ATP metabolic process (3.2%) proton transmembrane transport (0.1%)" plasma membrane (0.1%) "ATP binding (24.9%) proton-transporting ATPase activity, rotational mechanism (24.9%) proton-transporting ATP synthase activity, rotational mechanism (21.7%)" "IPR000194 (13.2%) IPR022878 (13.2%) IPR027417 (13.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (13.2%) V-type ATP synthase catalytic alpha chain (13.2%) P-loop containing nucleoside triphosphate hydrolase (13.2%)" VLMHTNKGDIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR002130 (25.8%) IPR020892 (25.8%) IPR044666 (25.8%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (25.8%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (25.8%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like (25.8%)" TIEQILEAIENMK Clostridia Bacteria Bacillati Bacillota Clostridia GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" IFDALNDVDNVK Bacteroidota Bacteria Pseudomonadati Bacteroidota "6.4.1.7 (66.7%) 2.1.3.1 (16.7%) 4.1.1.3 (16.7%)" "2-oxoglutarate carboxylase (66.7%) methylmalonyl-CoA carboxytransferase (16.7%) Transferred entry: 4.1.1.112 and 7.2.4.2 (16.7%)" GO:0006094 (31.3%) GO:0005737 (31.3%) "GO:0004736 (31.3%) GO:0034029 (2.7%) GO:0016740 (1.8%)" gluconeogenesis (31.3%) cytoplasm (31.3%) "pyruvate carboxylase activity (31.3%) 2-oxoglutarate carboxylase activity (2.7%) transferase activity (1.8%)" "IPR000891 (20.1%) IPR013785 (20.1%) IPR055268 (20.1%)" "Pyruvate carboxyltransferase (20.1%) Aldolase-type TIM barrel (20.1%) Pyruvate carboxylase-like (20.1%)" GAVPGATGSDLIVKPAVKA root "GO:0006412 (24.8%) GO:0000027 (0.1%) GO:0002181 (0.1%)" "GO:0022625 (24.9%) GO:0005840 (0.7%) GO:0005737 (0.1%)" "GO:0003735 (24.9%) GO:0019843 (24.4%)" "translation (24.8%) ribosomal large subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic large ribosomal subunit (24.9%) ribosome (0.7%) cytoplasm (0.1%)" "structural constituent of ribosome (24.9%) rRNA binding (24.4%)" "IPR009000 (25.1%) IPR019927 (25.1%) IPR000597 (24.7%)" "Translation protein, beta-barrel domain superfamily (25.1%) Large ribosomal subunit protein uL3, bacteria/organella (25.1%) Large ribosomal subunit protein uL3 (24.7%)" TLNALADHGNGAPSIK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (25%)" GO:0005737 (25%) GO:0004801 (25%) "carbohydrate metabolic process (25%) pentose-phosphate shunt (25%)" cytoplasm (25%) transaldolase activity (25%) "IPR001585 (27.5%) IPR004732 (27.5%) IPR013785 (27.5%)" "Transaldolase/Fructose-6-phosphate aldolase (27.5%) Transaldolase type 2 (27.5%) Aldolase-type TIM barrel (27.5%)" DLKKEFWSNVFIPGNADNLNTELEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (15%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (15%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" QREESVGEEENLYIPPSSSLAGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033103 (50%) GO:0033104 (50%) protein secretion by the type VI secretion system (50%) type VI protein secretion system complex (50%) IPR035576 (100%) Type VI secretion system TssC (100%) QVLANEPVTVEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11%) GO:0009089 (11%) GO:0009097 (11%)" "GO:0004073 (11.2%) GO:0046983 (11.2%) GO:0050661 (11%)" "threonine biosynthetic process (11%) lysine biosynthetic process via diaminopimelate (11%) isoleucine biosynthetic process (11%)" "aspartate-semialdehyde dehydrogenase activity (11.2%) protein dimerization activity (11.2%) NADP binding (11%)" "IPR012280 (19.2%) IPR000534 (18.9%) IPR005986 (18.9%)" "Semialdehyde dehydrogenase, dimerisation domain (19.2%) Semialdehyde dehydrogenase, NAD-binding (18.9%) Aspartate-semialdehyde dehydrogenase, beta-type (18.9%)" EYTKENMPKFDEFWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR013022 (33.3%) IPR036237 (33.3%) IPR050312 (33.3%)" "Xylose isomerase-like, TIM barrel domain (33.3%) Xylose isomerase-like superfamily (33.3%) IolE/XylA/MocC-like (33.3%)" IVSLLDKINPNALLIGFGRR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.1%) "GO:0008184 (33.1%) GO:0030170 (33.1%) GO:0016757 (0.8%)" carbohydrate metabolic process (33.1%) "glycogen phosphorylase activity (33.1%) pyridoxal phosphate binding (33.1%) glycosyltransferase activity (0.8%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" SRTASSGDYNKNQYYGITAGPAYR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0009279 (50%) GO:0044384 (50%)" "cell outer membrane (50%) host outer membrane (50%)" "IPR000758 (25.1%) IPR011250 (25.1%) IPR051723 (25.1%)" "Virulence-related outer membrane protein (25.1%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (25.1%) Bacterial Outer Membrane Invasion-Related Protein (25.1%)" KIPLRTEEVEAIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0030145 (25%) GO:0070006 (25%)" proteolysis (25%) cytosol (25%) "manganese ion binding (25%) metalloaminopeptidase activity (25%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" ANGGVAEMQKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.8%) GO:0008615 (19.8%)" GO:0005737 (19.8%) "GO:0004648 (19.8%) GO:0030170 (19.8%) GO:0008483 (0.9%)" "L-serine biosynthetic process (19.8%) pyridoxine biosynthetic process (19.8%)" cytoplasm (19.8%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.8%) pyridoxal phosphate binding (19.8%) transaminase activity (0.9%)" "IPR000192 (20.6%) IPR022278 (20.6%) IPR015421 (19.6%)" "Aminotransferase class V domain (20.6%) Phosphoserine aminotransferase (20.6%) Pyridoxal phosphate-dependent transferase, major domain (19.6%)" YVTIDVTKEYYEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.5 (100%) argininosuccinate synthase (100%) "GO:0000050 (16.7%) GO:0000053 (16.7%) GO:0006526 (16.7%)" GO:0005737 (16.7%) "GO:0004055 (16.7%) GO:0005524 (16.7%)" "urea cycle (16.7%) argininosuccinate metabolic process (16.7%) L-arginine biosynthetic process (16.7%)" cytoplasm (16.7%) "argininosuccinate synthase activity (16.7%) ATP binding (16.7%)" "IPR001518 (14.5%) IPR014729 (14.5%) IPR018223 (14.5%)" "Argininosuccinate synthase (14.5%) Rossmann-like alpha/beta/alpha sandwich fold (14.5%) Argininosuccinate synthase, conserved site (14.5%)" AGDAAAALKPGEVLLLENLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" GLRGGHSGLEINEGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) "GO:0006508 (25%) GO:0043171 (0.2%)" GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" "proteolysis (25%) peptide catabolic process (0.2%)" cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (30.4%) IPR002933 (30.4%) IPR011650 (30.4%)" "Peptidase M20C, Xaa-His dipeptidase (30.4%) Peptidase M20 (30.4%) Peptidase M20, dimerisation domain (30.4%)" LGQNGDDEVNQVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" GQVLAKPGTIKPHTKFESEVYILSKDEGGR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0046677 (0.1%) GO:0006414 (0%)" "GO:0005829 (20.2%) GO:0032045 (6.9%) GO:0005886 (1.5%)" "GO:0003746 (20.4%) GO:0005525 (20.3%) GO:0003924 (10.3%)" "response to antibiotic (0.1%) translational elongation (0%)" "cytosol (20.2%) guanyl-nucleotide exchange factor complex (6.9%) plasma membrane (1.5%)" "translation elongation factor activity (20.4%) GTP binding (20.3%) GTPase activity (10.3%)" "IPR050055 (12.4%) IPR004160 (12.3%) IPR009001 (12.3%)" "Elongation factor Tu GTPase (12.4%) Translation elongation factor EFTu/EF1A, C-terminal (12.3%) Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (12.3%)" VDFVDETGDAFEEYIVFHHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20.6%) GO:0009263 (16.1%)" "GO:0004748 (21.1%) GO:0031419 (21.1%) GO:0005524 (16.1%)" "DNA biosynthetic process (20.6%) deoxyribonucleotide biosynthetic process (16.1%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (21.1%) cobalamin binding (21.1%) ATP binding (16.1%)" "IPR000788 (26.7%) IPR050862 (26.7%) IPR013344 (26.5%)" "Ribonucleotide reductase large subunit, C-terminal (26.7%) Ribonucleoside diphosphate reductase class-2 (26.7%) Ribonucleotide reductase, adenosylcobalamin-dependent (26.5%)" AVIEALSNSFTWLQEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20.1%) IPR018189 (20.1%) IPR035476 (20.1%)" "Phosphoglucose isomerase (PGI) (20.1%) Phosphoglucose isomerase, conserved site (20.1%) Phosphoglucose isomerase, SIS domain 1 (20.1%)" VSVHDVIHPITGEVIVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" KTLLTQVAPPGVTAHVVDVAK root "2.7.1.191 (98.2%) 2.7.1.- (1.2%) 2.7.1.69 (0.6%)" "protein-N(pi)-phosphohistidine--D-mannose phosphotransferase (98.2%) Phosphotransferases with an alcohol group as acceptor (1.2%) Transferred entry: 2.7.1.191, 2.7.1.192, 2.7.1.193, 2.7.1.194, 2.7.1.1952.7.1.196, 2.7.1.197, 2.7.1.198, 2.7.1.199, 2.7.1.200, 2.7.1.2012.7.1.202, 2.7.1.203, 2.7.1.204, 2.7.1.205, 2.7.1.206, 2.7.1.207 an2.7.1.208 (0.6%)" "GO:0009401 (20.1%) GO:0015761 (0%) GO:0015764 (0%)" "GO:0005737 (20.1%) GO:0005886 (19.1%) GO:0016020 (0.1%)" "GO:0008982 (20.1%) GO:0016301 (20.1%) GO:0016740 (0.1%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (20.1%) mannose transmembrane transport (0%) N-acetylglucosamine transport (0%)" "cytoplasm (20.1%) plasma membrane (19.1%) membrane (0.1%)" "protein-N(PI)-phosphohistidine-sugar phosphotransferase activity (20.1%) kinase activity (20.1%) transferase activity (0.1%)" "IPR004720 (12.9%) IPR036667 (12.9%) IPR018455 (12.7%)" "Phosphotransferase system, sorbose subfamily IIB component (12.9%) Phosphotransferase system, sorbose subfamily IIB component superfamily (12.9%) Phosphotransferase system, sorbose subfamily IIB component, subgroup (12.7%)" HYAHVDCPGHADFVK Bacteria Bacteria 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (18.1%) GO:0032045 (3%) GO:0005737 (0.3%)" "GO:0003746 (18.6%) GO:0003924 (18.6%) GO:0005525 (18.6%)" "cytosol (18.1%) guanyl-nucleotide exchange factor complex (3%) cytoplasm (0.3%)" "translation elongation factor activity (18.6%) GTPase activity (18.6%) GTP binding (18.6%)" "IPR000795 (8.9%) IPR027417 (8.9%) IPR050055 (8.9%)" "Translational (tr)-type GTP-binding domain (8.9%) P-loop containing nucleoside triphosphate hydrolase (8.9%) Elongation factor Tu GTPase (8.9%)" TGHMEAVTRFMISFGKGLGLETLQDEVGNVLIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" YVITDELNKDGLGACGYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR025150 (50%) IPR053850 (50%)" "Glycoside hydrolase 123, catalytic domain (50%) Glycoside hydrolase 123, N-terminal domain (50%)" IGGIPVVDEGGYLVGIVTNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" EQVELDVKEVTADEFNKLFE Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" LFVLPPDTVVYPGHGDPTTVGAEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.-.-.- (50%) 3.1.2.6 (50%)" "Hydrolases (50%) hydroxyacylglutathione hydrolase (50%)" "GO:0046872 (50%) GO:0016787 (46.9%) GO:0004416 (3.1%)" "metal ion binding (50%) hydrolase activity (46.9%) hydroxyacylglutathione hydrolase activity (3.1%)" "IPR001279 (33.3%) IPR036866 (33.3%) IPR051453 (33.3%)" "Metallo-beta-lactamase (33.3%) Ribonuclease Z/Hydroxyacylglutathione hydrolase-like (33.3%) Metallo-Beta-Lactamase Glyoxalase II (33.3%)" LPGFPIVLHGSSSVPQEEVETINK Bacteria Bacteria "4.1.2.13 (94.7%) 4.1.2.- (5.3%)" "fructose-bisphosphate aldolase (94.7%) Aldehyde-lyases (5.3%)" "GO:0006096 (24.3%) GO:0030388 (24.3%) GO:0005975 (1%)" "GO:0008270 (25.2%) GO:0004332 (24.3%) GO:0016832 (1%)" "glycolytic process (24.3%) fructose 1,6-bisphosphate metabolic process (24.3%) carbohydrate metabolic process (1%)" "zinc ion binding (25.2%) fructose-bisphosphate aldolase activity (24.3%) aldehyde-lyase activity (1%)" "IPR000771 (25.2%) IPR013785 (25.2%) IPR050246 (25.2%)" "Fructose-bisphosphate aldolase, class-II (25.2%) Aldolase-type TIM barrel (25.2%) Class II Fructose-bisphosphate Aldolase (25.2%)" IGTDTTYAPFSSK root 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (48.1%) GO:0006995 (0.1%) GO:0009267 (0.1%)" "GO:0030288 (50.7%) GO:0016020 (0.1%) GO:0030313 (0.1%)" "GO:0016597 (0.2%) GO:0005524 (0.1%) GO:0016787 (0.1%)" "amino acid transport (48.1%) cellular response to nitrogen starvation (0.1%) cellular response to starvation (0.1%)" "outer membrane-bounded periplasmic space (50.7%) membrane (0.1%) cell envelope (0.1%)" "amino acid binding (0.2%) ATP binding (0.1%) hydrolase activity (0.1%)" "IPR001638 (33.6%) IPR018313 (33.6%) IPR005768 (32.8%)" "Solute-binding protein family 3/N-terminal domain of MltF (33.6%) Solute-binding protein family 3, conserved site (33.6%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (32.8%)" GVQTLLDAVCAFLPSPEDTPAIEGTDPSDPDKIITR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" IFSIASALEEGYSIER Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "6.3.5.5 (94.4%) 6.3.4.16 (5.6%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (94.4%) carbamoyl-phosphate synthase (ammonia) (5.6%)" "GO:0006221 (13.4%) GO:0006526 (13.4%) GO:0006541 (13.4%)" GO:0005737 (13.4%) "GO:0004088 (13.4%) GO:0005524 (13.4%) GO:0046872 (13.4%)" "pyrimidine nucleotide biosynthetic process (13.4%) L-arginine biosynthetic process (13.4%) glutamine metabolic process (13.4%)" cytoplasm (13.4%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.4%) ATP binding (13.4%) metal ion binding (13.4%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" DTSCIVITHYQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003439 (25%) IPR003593 (25%) IPR010230 (25%)" "ABC transporter-like, ATP-binding domain (25%) AAA+ ATPase domain (25%) FeS cluster assembly SUF system, ATPase SufC (25%)" SFVAVHNQPGLYVGQQAR Bacteria Bacteria "GO:0019867 (98.1%) GO:0009279 (0.9%)" GO:0042802 (0.9%) "outer membrane (98.1%) cell outer membrane (0.9%)" identical protein binding (0.9%) IPR004658 (100%) Outer membrane lipoprotein Slp (100%) QYAGFSTAEESNAFYRR root 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) "GO:0005737 (20%) GO:0005739 (0%)" "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (19.8%)" propionate metabolic process, methylmalonyl pathway (20%) "cytoplasm (20%) mitochondrion (0%)" "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (19.8%)" "IPR006099 (16.8%) IPR016176 (16.8%) IPR006098 (16.7%)" "Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.8%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (16.8%) Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%)" EGQQVPEMTPEIVNSISER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" KMGLQTYSLGQELLQDMPNGLNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR013022 (33.3%) IPR036237 (33.3%) IPR050312 (33.3%)" "Xylose isomerase-like, TIM barrel domain (33.3%) Xylose isomerase-like superfamily (33.3%) IolE/XylA/MocC-like (33.3%)" ITVDKDTTTIVNGAGDKEAIQAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" AGLHLEAGAK Bacteria Bacteria "1.2.1.- (78%) 1.2.1.12 (22%)" "With NAD(+) or NADP(+) as acceptor (78%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (22%)" GO:0006006 (25%) "GO:0050661 (25%) GO:0051287 (25%) GO:0016620 (24.2%)" glucose metabolic process (25%) "NADP binding (25%) NAD binding (25%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (24.2%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" TSHEIQKIEALENEDLAPLIDQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (83.3%) 1.2.7.- (16.7%)" "pyruvate synthase (83.3%) With an iron-sulfur protein as acceptor (16.7%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (13.1%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (13.1%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" ASYLDTGTWASNAIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20.2%) GO:0008615 (19.3%)" GO:0005737 (20.2%) "GO:0004648 (20.2%) GO:0030170 (20.2%)" "L-serine biosynthetic process (20.2%) pyridoxine biosynthetic process (19.3%)" cytoplasm (20.2%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20.2%) pyridoxal phosphate binding (20.2%)" "IPR000192 (17.2%) IPR015421 (17.2%) IPR015422 (17.2%)" "Aminotransferase class V domain (17.2%) Pyridoxal phosphate-dependent transferase, major domain (17.2%) Pyridoxal phosphate-dependent transferase, small domain (17.2%)" KELSVFGDDYDTADGSCIRDYINVVDLAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR001509 (33.3%) IPR005886 (33.3%) IPR036291 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%)" AKLESLVEDLVNR root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0006260 (0.1%) GO:0042026 (0.1%) GO:0051085 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0005524 (26%) GO:0140662 (26%) GO:0051082 (24.5%)" "DNA replication (0.1%) protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytosol (0.1%) cytoplasm (0%) plasma membrane (0%)" "ATP binding (26%) ATP-dependent protein folding chaperone (26%) unfolded protein binding (24.5%)" "IPR013126 (17.1%) IPR018181 (17%) IPR043129 (17%)" "Heat shock protein 70 family (17.1%) Heat shock protein 70, conserved site (17%) ATPase, nucleotide binding domain (17%)" ALGYAVTEVKGDDLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR008969 (14.3%) IPR012910 (14.3%) IPR023996 (14.3%)" "Carboxypeptidase-like, regulatory domain superfamily (14.3%) TonB-dependent receptor, plug domain (14.3%) TonB-dependent outer membrane protein, SusC/RagA (14.3%)" SVPYPGIPELLALLQER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.3.18 (100%) phosphoglycolate phosphatase (100%) GO:0006281 (33.3%) GO:0005829 (33.3%) GO:0008967 (33.3%) DNA repair (33.3%) cytosol (33.3%) phosphoglycolate phosphatase activity (33.3%) "IPR006439 (16.7%) IPR023198 (16.7%) IPR023214 (16.7%)" "HAD hydrolase, subfamily IA (16.7%) Phosphoglycolate phosphatase-like, domain 2 (16.7%) HAD superfamily (16.7%)" AYSASPSGEGMSADGMKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" AILATIKPTEVPLDQLNAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.-.-.- (100%) Hydrolases (100%) GO:0005829 (25%) "GO:0000287 (25%) GO:0016289 (25%) GO:0016791 (25%)" cytosol (25%) "magnesium ion binding (25%) acyl-CoA hydrolase activity (25%) phosphatase activity (25%)" "IPR000150 (14.3%) IPR003736 (14.3%) IPR006379 (14.3%)" "Cof family (14.3%) Phenylacetic acid degradation-related domain (14.3%) HAD-superfamily hydrolase, subfamily IIB (14.3%)" ASVPSGASTGEHEALELRDGDK Pseudomonadati Bacteria Pseudomonadati 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0005576 (16.7%) GO:0000015 (16.6%) GO:0009986 (16.5%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" glycolytic process (16.7%) "extracellular region (16.7%) phosphopyruvate hydratase complex (16.6%) cell surface (16.5%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.7%) IPR020810 (16.7%) IPR020811 (16.7%)" "Enolase (16.7%) Enolase, C-terminal TIM barrel domain (16.7%) Enolase, N-terminal (16.7%)" GAEHPYAGMKPQVFEIAQVSQQAK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium "GO:0006412 (20%) GO:0017148 (20%)" GO:0022625 (20%) "GO:0003729 (20%) GO:0003735 (20%)" "translation (20%) negative regulation of translation (20%)" cytosolic large ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%)" "IPR005822 (33.3%) IPR005823 (33.3%) IPR036899 (33.3%)" "Large ribosomal subunit protein uL13 (33.3%) Large ribosomal subunit protein uL13, bacteria (33.3%) Large ribosomal subunit protein uL13 superfamily (33.3%)" TLNAEIVFVMSQGTDTPEQLKER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0006085 (23.7%) GO:0006083 (0.2%) GO:0019413 (0.2%)" "GO:0005737 (34.5%) GO:0005829 (0.2%)" "GO:0008959 (38.4%) GO:0016746 (1.1%) GO:0016740 (0.5%)" "acetyl-CoA biosynthetic process (23.7%) acetate metabolic process (0.2%) acetate biosynthetic process (0.2%)" "cytoplasm (34.5%) cytosol (0.2%)" "phosphate acetyltransferase activity (38.4%) acyltransferase activity (1.1%) transferase activity (0.5%)" "IPR027417 (12%) IPR050500 (12%) IPR010766 (11.4%)" "P-loop containing nucleoside triphosphate hydrolase (12%) Phosphate Acetyltransferase/Butyryltransferase (12%) DRTGG (11.4%)" KDNTWYTGAK Bacteria Bacteria "GO:0034220 (20%) GO:0006811 (3.3%) GO:0006974 (0.1%)" "GO:0009279 (25.4%) GO:0046930 (25.4%) GO:0016020 (0.1%)" "GO:0015288 (25.4%) GO:0015075 (0.1%) GO:0042802 (0.1%)" "monoatomic ion transmembrane transport (20%) monoatomic ion transport (3.3%) DNA damage response (0.1%)" "cell outer membrane (25.4%) pore complex (25.4%) membrane (0.1%)" "porin activity (25.4%) monoatomic ion transmembrane transporter activity (0.1%) identical protein binding (0.1%)" "IPR000498 (13.3%) IPR011250 (13.2%) IPR002368 (13%)" "Outer membrane protein OmpA-like, transmembrane domain (13.3%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (13.2%) Outer membrane protein, OmpA (13%)" FKDVAAECGVSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0043200 (32.1%) GO:0006355 (0.4%)" "GO:0005829 (32.1%) GO:0016020 (0.2%)" "GO:0043565 (35%) GO:0003700 (0.2%)" "response to amino acid (32.1%) regulation of DNA-templated transcription (0.4%)" "cytosol (32.1%) membrane (0.2%)" "sequence-specific DNA binding (35%) DNA-binding transcription factor activity (0.2%)" "IPR000485 (16.5%) IPR036388 (16.5%) IPR036390 (16.5%)" "AsnC-type HTH domain (16.5%) Winged helix-like DNA-binding domain superfamily (16.5%) Winged helix DNA-binding domain superfamily (16.5%)" ELGCKNPEIVLHLDHGDTFETCK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (25%) GO:0030388 (25%)" "GO:0004332 (25%) GO:0008270 (25%)" "glycolytic process (25%) fructose 1,6-bisphosphate metabolic process (25%)" "fructose-bisphosphate aldolase activity (25%) zinc ion binding (25%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" FGDPEVLEDPDKMDALINR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.6.1.- (100%) In phosphorus-containing anhydrides (100%) "GO:0006412 (12.5%) GO:0045900 (12.5%)" GO:0005737 (12.5%) "GO:0000049 (12.5%) GO:0005524 (12.5%) GO:0016887 (12.5%)" "translation (12.5%) negative regulation of translational elongation (12.5%)" cytoplasm (12.5%) "tRNA binding (12.5%) ATP binding (12.5%) ATP hydrolysis activity (12.5%)" "IPR003439 (16.7%) IPR003593 (16.7%) IPR017871 (16.7%)" "ABC transporter-like, ATP-binding domain (16.7%) AAA+ ATPase domain (16.7%) ABC transporter-like, conserved site (16.7%)" VLDEKLGFTAQNVYNQVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (24.2%) GO:0047896 (0.8%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (24.2%) formaldehyde transketolase activity (0.8%)" "IPR009014 (12.8%) IPR033247 (12.8%) IPR055152 (12.8%)" "Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.8%) Transketolase family (12.8%) Transketolase-like, C-terminal domain (12.8%)" FNPPKVEGKDDVTGEELTTRKDDQEETVR root 2.7.4.3 (100%) adenylate kinase (100%) "GO:0044209 (17.1%) GO:0006172 (0.1%) GO:0006270 (0.1%)" "GO:0005737 (27%) GO:0005829 (0.1%) GO:0005758 (0.1%)" "GO:0004017 (27.3%) GO:0005524 (27.2%) GO:0016301 (0.3%)" "AMP salvage (17.1%) ADP biosynthetic process (0.1%) DNA replication initiation (0.1%)" "cytoplasm (27%) cytosol (0.1%) mitochondrial intermembrane space (0.1%)" "AMP kinase activity (27.3%) ATP binding (27.2%) kinase activity (0.3%)" "IPR007862 (20.1%) IPR027417 (20.1%) IPR000850 (20.1%)" "Adenylate kinase, active site lid domain (20.1%) P-loop containing nucleoside triphosphate hydrolase (20.1%) Adenylate kinase/UMP-CMP kinase (20.1%)" VYYHHTGHIGGIK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.8%) GO:0017148 (19.8%) GO:0002181 (0%)" "GO:0022625 (19.8%) GO:0005840 (0.6%) GO:0005737 (0.1%)" "GO:0003735 (19.8%) GO:0003729 (19.8%) GO:0008270 (0%)" "translation (19.8%) negative regulation of translation (19.8%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (19.8%) ribosome (0.6%) cytoplasm (0.1%)" "structural constituent of ribosome (19.8%) mRNA binding (19.8%) zinc ion binding (0%)" "IPR005822 (25%) IPR005823 (25%) IPR036899 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13 superfamily (25%)" DSFKNFFESK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR002318 (9.2%) IPR018164 (9.2%) IPR045864 (9.2%)" "Alanine-tRNA ligase, class IIc (9.2%) Alanyl-tRNA synthetase, class IIc, N-terminal (9.2%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (9.2%)" MIVVPVKEGENIEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (24.9%) "GO:0005840 (25.2%) GO:1990904 (24.9%)" GO:0003735 (24.9%) translation (24.9%) "ribosome (25.2%) ribonucleoprotein complex (24.9%)" structural constituent of ribosome (24.9%) "IPR001911 (49.4%) IPR038380 (49.4%) IPR018278 (1.2%)" "Small ribosomal subunit protein bS21 (49.4%) Small ribosomal subunit protein bS21 superfamily (49.4%) Small ribosomal subunit protein bS21, conserved site (1.2%)" VAIDCVNSVGGIVIPDLLYALGVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "5.4.2.10 (66.7%) 5.4.2.2 (33.3%)" "phosphoglucosamine mutase (66.7%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (33.3%)" "GO:0005975 (13.6%) GO:0006048 (13.6%) GO:0009252 (13.6%)" GO:0005829 (13.6%) "GO:0000287 (13.6%) GO:0004615 (13.6%) GO:0008966 (13.6%)" "carbohydrate metabolic process (13.6%) UDP-N-acetylglucosamine biosynthetic process (13.6%) peptidoglycan biosynthetic process (13.6%)" cytosol (13.6%) "magnesium ion binding (13.6%) phosphomannomutase activity (13.6%) phosphoglucosamine mutase activity (13.6%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" FTLDELQQFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" EYHPTLIVMGTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR006015 (32.3%) IPR006016 (32.3%) IPR014729 (30.8%)" "Universal stress protein A family (32.3%) UspA (32.3%) Rossmann-like alpha/beta/alpha sandwich fold (30.8%)" GFTNQQVFLIQDIYR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 2.3.1.129 (100%) acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (100%) GO:0009245 (33.3%) GO:0016020 (33.3%) GO:0008780 (33.3%) lipid A biosynthetic process (33.3%) membrane (33.3%) acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity (33.3%) "IPR001451 (20%) IPR010137 (20%) IPR011004 (20%)" "Hexapeptide repeat (20%) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (20%) Trimeric LpxA-like superfamily (20%)" IDDLENGKSYVISK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (19.3%) GO:0009098 (19.3%) GO:0009099 (19.3%)" "GO:0004084 (19.7%) GO:0052654 (4.3%) GO:0052655 (4.3%)" "isoleucine biosynthetic process (19.3%) L-leucine biosynthetic process (19.3%) L-valine biosynthetic process (19.3%)" "branched-chain-amino-acid transaminase activity (19.7%) L-leucine-2-oxoglutarate transaminase activity (4.3%) L-valine-2-oxoglutarate transaminase activity (4.3%)" "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" DKGEEFVNENYDKSIEELTWHLIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.3%) GO:0043335 (16.3%) GO:0051083 (16.3%)" "GO:0003755 (16.3%) GO:0043022 (16.3%) GO:0044183 (16.3%)" "protein transport (16.3%) protein unfolding (16.3%) 'de novo' cotranslational protein folding (16.3%)" "peptidyl-prolyl cis-trans isomerase activity (16.3%) ribosome binding (16.3%) protein folding chaperone (16.3%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" QANQIYDEVKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.-.- (100%) Acting on acid anhydrides (100%) GO:0016787 (100%) hydrolase activity (100%) "IPR025669 (33.3%) IPR027417 (33.3%) IPR050678 (33.3%)" "AAA domain (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%) DNA Partitioning ATPase (33.3%)" VNPVVPEVVNQVCFK root 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006531 (21.2%) GO:0006099 (20.8%) GO:0006533 (0%)" "GO:0005829 (21.2%) GO:0016020 (0%)" "GO:0008797 (21.2%) GO:0042802 (15.4%) GO:0016829 (0.2%)" "aspartate metabolic process (21.2%) tricarboxylic acid cycle (20.8%) L-aspartate catabolic process (0%)" "cytosol (21.2%) membrane (0%)" "aspartate ammonia-lyase activity (21.2%) identical protein binding (15.4%) lyase activity (0.2%)" "IPR008948 (12.7%) IPR051546 (12.7%) IPR022761 (12.6%)" "L-Aspartase-like (12.7%) Class-II Aspartate Ammonia-Lyase (12.7%) Fumarate lyase, N-terminal (12.6%)" QVIKETGVVFQLGHQGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.1.1.18 (66.7%) 1.1.1.292 (33.3%)" "inositol 2-dehydrogenase (66.7%) 1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming) (33.3%)" "GO:0000166 (73.3%) GO:0050112 (13.3%) GO:0016491 (6.7%)" "nucleotide binding (73.3%) inositol 2-dehydrogenase (NAD+) activity (13.3%) oxidoreductase activity (6.7%)" "IPR000683 (25%) IPR004104 (25%) IPR036291 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Gfo/Idh/MocA-like oxidoreductase, C-terminal (25%) NAD(P)-binding domain superfamily (25%)" QLGLASYEAIEAFVQYIPLR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.7%) GO:0006044 (32.7%)" "GO:0004342 (32.7%) GO:0016853 (1.9%)" "carbohydrate metabolic process (32.7%) N-acetylglucosamine metabolic process (32.7%)" "glucosamine-6-phosphate deaminase activity (32.7%) isomerase activity (1.9%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" IISGGTDNHSMLIDLR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.2%) GO:0035999 (15.2%) GO:0032259 (11.7%)" GO:0005829 (15.2%) "GO:0004372 (15.2%) GO:0030170 (15.2%) GO:0008168 (11.7%)" "glycine biosynthetic process from serine (15.2%) tetrahydrofolate interconversion (15.2%) methylation (11.7%)" cytosol (15.2%) "glycine hydroxymethyltransferase activity (15.2%) pyridoxal phosphate binding (15.2%) methyltransferase activity (11.7%)" "IPR001085 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Serine hydroxymethyltransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" IGETHDGTATMDWMAQEQER Bacteria Bacteria "GO:0032790 (20.2%) GO:0006412 (2.1%)" GO:0005737 (17.6%) "GO:0003924 (20.2%) GO:0005525 (20.2%) GO:0003746 (18.1%)" "ribosome disassembly (20.2%) translation (2.1%)" cytoplasm (17.6%) "GTPase activity (20.2%) GTP binding (20.2%) translation elongation factor activity (18.1%)" "IPR000795 (6.9%) IPR005225 (6.9%) IPR027417 (6.9%)" "Translational (tr)-type GTP-binding domain (6.9%) Small GTP-binding domain (6.9%) P-loop containing nucleoside triphosphate hydrolase (6.9%)" YMANAMGPEGVR root "1.3.1.9 (99.9%) 1.3.1.10 (0.1%)" "enoyl-[acyl-carrier-protein] reductase (NADH) (99.9%) enoyl-[acyl-carrier-protein] reductase (NADPH, Si-specific) (0.1%)" "GO:0006633 (34.4%) GO:0009102 (29.6%) GO:0030497 (0.2%)" "GO:0005829 (0%) GO:0005886 (0%) GO:0016020 (0%)" "GO:0004318 (34.6%) GO:0016491 (0.3%) GO:0042802 (0.2%)" "fatty acid biosynthetic process (34.4%) biotin biosynthetic process (29.6%) fatty acid elongation (0.2%)" "cytosol (0%) plasma membrane (0%) membrane (0%)" "enoyl-[acyl-carrier-protein] reductase (NADH) activity (34.6%) oxidoreductase activity (0.3%) identical protein binding (0.2%)" "IPR002347 (33.2%) IPR014358 (33.2%) IPR036291 (33.2%)" "Short-chain dehydrogenase/reductase SDR (33.2%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.2%) NAD(P)-binding domain superfamily (33.2%)" YVQGARPWGEKCDIAMPSATQNELNGDDAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (26.3%) GO:0005829 (23.7%) "GO:0004354 (26.3%) GO:0000166 (23.7%)" glutamate biosynthetic process (26.3%) cytosol (23.7%) "glutamate dehydrogenase (NADP+) activity (26.3%) nucleotide binding (23.7%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" GIFPAAVDFSTDLHSMGQWIQEGER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR046348 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) SIS domain superfamily (20%)" LQVEHPVTEECTGVDLVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.3.4.14 (85.1%) 6.4.1.7 (10.6%) 6.4.1.1 (2.1%)" "biotin carboxylase (85.1%) 2-oxoglutarate carboxylase (10.6%) pyruvate carboxylase (2.1%)" GO:2001295 (17.5%) "GO:0005524 (21.8%) GO:0046872 (21.8%) GO:0003989 (17%)" malonyl-CoA biosynthetic process (17.5%) "ATP binding (21.8%) metal ion binding (21.8%) acetyl-CoA carboxylase activity (17%)" "IPR005479 (12.7%) IPR005482 (12.7%) IPR011054 (12.7%)" "Carbamoyl phosphate synthase, ATP-binding domain (12.7%) Biotin carboxylase, C-terminal (12.7%) Rudiment single hybrid motif (12.7%)" SLGNSPDPLELIEK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (20.1%) "GO:0005829 (20.1%) GO:0016020 (0.1%)" "GO:0004832 (20.1%) GO:0005524 (20.1%) GO:0002161 (19.6%)" valyl-tRNA aminoacylation (20.1%) "cytosol (20.1%) membrane (0.1%)" "valine-tRNA ligase activity (20.1%) ATP binding (20.1%) aminoacyl-tRNA deacylase activity (19.6%)" "IPR002300 (9.2%) IPR002303 (9.2%) IPR013155 (9.2%)" "Aminoacyl-tRNA synthetase, class Ia (9.2%) Valine-tRNA ligase (9.2%) Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding (9.2%)" MLLAGNLFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0009409 (10.1%) GO:0000027 (9.5%) GO:0010467 (8.8%)" "GO:0005829 (10.3%) GO:1990904 (10.3%)" "GO:0003924 (10.3%) GO:0005525 (10.3%) GO:0000049 (9.5%)" "response to cold (10.1%) ribosomal large subunit assembly (9.5%) gene expression (8.8%)" "cytosol (10.3%) ribonucleoprotein complex (10.3%)" "GTPase activity (10.3%) GTP binding (10.3%) tRNA binding (9.5%)" "IPR000795 (6.7%) IPR005225 (6.7%) IPR009000 (6.7%)" "Translational (tr)-type GTP-binding domain (6.7%) Small GTP-binding domain (6.7%) Translation protein, beta-barrel domain superfamily (6.7%)" MYAIVEINGQQFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.5%) "GO:0005840 (16.7%) GO:0005737 (16.6%) GO:1990904 (16.5%)" "GO:0003735 (16.5%) GO:0019843 (15.2%) GO:0003723 (1.3%)" translation (16.5%) "ribosome (16.7%) cytoplasm (16.6%) ribonucleoprotein complex (16.5%)" "structural constituent of ribosome (16.5%) rRNA binding (15.2%) RNA binding (1.3%)" "IPR028909 (32%) IPR036164 (32%) IPR001787 (31.9%)" "Large ribosomal subunit protein bL21-like (32%) Large ribosomal subunit protein bL21-like superfamily (32%) Large ribosomal subunit protein bL21 (31.9%)" STLGVLTELCEKP Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (47.3%) "GO:0004493 (47.3%) GO:0016829 (2.2%) GO:0051213 (2.2%)" L-methylmalonyl-CoA metabolic process (47.3%) "methylmalonyl-CoA epimerase activity (47.3%) lyase activity (2.2%) dioxygenase activity (2.2%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" AESAAATLFYFLQMSHDKLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) YHPHGDSSVYGAIVR Bacteria Bacteria 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (12.7%) GO:0006261 (11.9%)" "GO:0005737 (12.7%) GO:0009330 (12.7%) GO:0005694 (12.1%)" "GO:0003677 (12.7%) GO:0005524 (12.7%) GO:0034335 (12.1%)" "DNA topological change (12.7%) DNA-templated DNA replication (11.9%)" "cytoplasm (12.7%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.7%) chromosome (12.1%)" "DNA binding (12.7%) ATP binding (12.7%) DNA negative supercoiling activity (12.1%)" "IPR002205 (12.7%) IPR050220 (12.7%) IPR013758 (12.6%)" "DNA topoisomerase, type IIA, domain A (12.7%) Type II DNA Topoisomerases (12.7%) DNA topoisomerase, type IIA, domain A, alpha-beta (12.6%)" MLVVGLVSVIEEGYRPLAQVQDQLR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR027304 (33.3%) IPR046357 (33.3%) IPR052029 (33.3%)" "Trigger factor/SurA domain superfamily (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) Periplasmic chaperone PpiD (33.3%)" RTGCQEIEAYFLASDYAYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (44%) IPR019734 (44%) IPR013105 (12%)" "Tetratricopeptide-like helical domain superfamily (44%) Tetratricopeptide repeat (44%) Tetratricopeptide repeat 2 (12%)" AVPFCQHYGVCGGCK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.1.190 (67.2%) 2.1.1.189 (18.2%) 2.1.1.- (14.6%)" "23S rRNA (uracil(1939)-C(5))-methyltransferase (67.2%) 23S rRNA (uracil(747)-C(5))-methyltransferase (18.2%) Methyltransferases (14.6%)" "GO:0070475 (49%) GO:0032259 (0.7%)" "GO:0070041 (49%) GO:0008168 (0.7%) GO:0046872 (0.3%)" "rRNA base methylation (49%) methylation (0.7%)" "rRNA (uridine-C5-)-methyltransferase activity (49%) methyltransferase activity (0.7%) metal ion binding (0.3%)" "IPR010280 (16.9%) IPR002792 (16.8%) IPR029063 (16.8%)" "(Uracil-5)-methyltransferase family (16.9%) TRAM domain (16.8%) S-adenosyl-L-methionine-dependent methyltransferase superfamily (16.8%)" FNHLGEAQSIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.5.1.100 (80%) 3.5.1.4 (20%)" "(R)-amidase (80%) amidase (20%)" "GO:0016747 (69.2%) GO:0016787 (28.2%) GO:0004040 (2.6%)" "acyltransferase activity, transferring groups other than amino-acyl groups (69.2%) hydrolase activity (28.2%) amidase activity (2.6%)" "IPR003010 (20.4%) IPR036526 (20.4%) IPR000182 (19.7%)" "Carbon-nitrogen hydrolase (20.4%) Carbon-nitrogen hydrolase superfamily (20.4%) GNAT domain (19.7%)" NFGKHPVTPWGVQTK root 2.-.-.- (100%) Transferases (100%) "GO:0002181 (17.1%) GO:0000027 (0%) GO:0006412 (0%)" "GO:0015934 (17%) GO:0005829 (14.1%) GO:0005840 (0.3%)" "GO:0003735 (17.1%) GO:0016740 (17%) GO:0019843 (16.9%)" "cytoplasmic translation (17.1%) ribosomal large subunit assembly (0%) translation (0%)" "large ribosomal subunit (17%) cytosol (14.1%) ribosome (0.3%)" "structural constituent of ribosome (17.1%) transferase activity (17%) rRNA binding (16.9%)" "IPR002171 (11.1%) IPR008991 (11.1%) IPR014726 (11.1%)" "Large ribosomal subunit protein uL2 (11.1%) Translation protein SH3-like domain superfamily (11.1%) Large ribosomal subunit protein uL2, domain 3 (11.1%)" EAKDMVDSAPSAIKEGIAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" KTNEYLDELAFLAETAGAEVVKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (20.1%) "GO:0005525 (20.1%) GO:0043022 (20.1%) GO:0046872 (20.1%)" cytoplasm (20.1%) "GTP binding (20.1%) ribosome binding (20.1%) metal ion binding (20.1%)" "IPR016496 (13.3%) IPR025121 (13.3%) IPR042108 (13.3%)" "GTPase HflX (13.3%) GTPase HflX, N-terminal (13.3%) GTPase HflX, N-terminal domain superfamily (13.3%)" STKPNAKNPQGGIVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (19.8%) GO:0022625 (0.2%)" "GO:0003735 (20%) GO:0019843 (19.8%) GO:0003723 (0.2%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (19.8%) cytosolic large ribosomal subunit (0.2%)" "structural constituent of ribosome (20%) rRNA binding (19.8%) RNA binding (0.2%)" "IPR003256 (16.8%) IPR008991 (16.8%) IPR014722 (16.8%)" "Large ribosomal subunit protein uL24 (16.8%) Translation protein SH3-like domain superfamily (16.8%) Large ribosomal subunit protein uL2, domain 2 (16.8%)" IGIENIAAYEDELLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.8.1.7 (100%) cysteine desulfurase (100%) GO:0006534 (32.3%) "GO:0030170 (32.3%) GO:0031071 (32.3%) GO:0008483 (3.2%)" cysteine metabolic process (32.3%) "pyridoxal phosphate binding (32.3%) cysteine desulfurase activity (32.3%) transaminase activity (3.2%)" "IPR000192 (16.7%) IPR010970 (16.7%) IPR015421 (16.7%)" "Aminotransferase class V domain (16.7%) Cysteine desulfurase, SufS (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" EITALTTAEMLDKEK Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus GO:0006412 (32.6%) "GO:0022625 (32.6%) GO:0005840 (2.2%)" GO:0003735 (32.6%) translation (32.6%) "cytosolic large ribosomal subunit (32.6%) ribosome (2.2%)" structural constituent of ribosome (32.6%) "IPR001854 (25%) IPR018254 (25%) IPR036049 (25%)" "Large ribosomal subunit protein uL29 (25%) Large ribosomal subunit protein uL29, conserved site (25%) Large ribosomal subunit protein uL29 superfamily (25%)" IVVPVKEGENIEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (24.9%) "GO:0005840 (25.2%) GO:1990904 (24.9%)" GO:0003735 (24.9%) translation (24.9%) "ribosome (25.2%) ribonucleoprotein complex (24.9%)" structural constituent of ribosome (24.9%) "IPR001911 (49.4%) IPR038380 (49.4%) IPR018278 (1.2%)" "Small ribosomal subunit protein bS21 (49.4%) Small ribosomal subunit protein bS21 superfamily (49.4%) Small ribosomal subunit protein bS21, conserved site (1.2%)" TQGAAAFEGAVIAYEPVWAIGTGK root 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0019563 (16.6%)" "GO:0005829 (16.6%) GO:0016020 (0%)" "GO:0004807 (16.6%) GO:0016853 (0.2%) GO:0042802 (0%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) glycerol catabolic process (16.6%)" "cytosol (16.6%) membrane (0%)" "triose-phosphate isomerase activity (16.6%) isomerase activity (0.2%) identical protein binding (0%)" "IPR000652 (20.1%) IPR013785 (20.1%) IPR020861 (20.1%)" "Triosephosphate isomerase (20.1%) Aldolase-type TIM barrel (20.1%) Triosephosphate isomerase, active site (20.1%)" MKVYQTNEIKNISILGSSGSGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000795 (7.7%) IPR005225 (7.7%) IPR027417 (7.7%)" "Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%) P-loop containing nucleoside triphosphate hydrolase (7.7%)" MNIVVAQDLYPESLEGDEPEPLPQVR Bacteria Bacteria "3.6.1.- (94.3%) 3.6.1.13 (1.9%) 3.6.1.22 (1.9%)" "In phosphorus-containing anhydrides (94.3%) ADP-ribose diphosphatase (1.9%) NAD(+) diphosphatase (1.9%)" "GO:0006753 (24%) GO:0019693 (24%)" GO:0005829 (24%) "GO:0019144 (24%) GO:0016787 (2.6%) GO:0047631 (0.5%)" "nucleoside phosphate metabolic process (24%) ribose phosphate metabolic process (24%)" cytosol (24%) "ADP-sugar diphosphatase activity (24%) hydrolase activity (2.6%) ADP-ribose diphosphatase activity (0.5%)" "IPR015797 (34.2%) IPR000086 (32.9%) IPR020084 (32.9%)" "NUDIX hydrolase-like domain superfamily (34.2%) NUDIX hydrolase domain (32.9%) NUDIX hydrolase, conserved site (32.9%)" LGKPVIFLVNQLDNEKCDYDMVLEQLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.2%) IPR000795 (7.2%) IPR005225 (7.2%)" "Elongation factor EFG, domain V-like (7.2%) Translational (tr)-type GTP-binding domain (7.2%) Small GTP-binding domain (7.2%)" MIDLGASGVQLGTR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.13.12.16 (100%) nitronate monooxygenase (100%) "GO:0018580 (85.7%) GO:0051213 (14.3%)" "nitronate monooxygenase activity (85.7%) dioxygenase activity (14.3%)" "IPR004136 (50%) IPR013785 (50%)" "Nitronate monooxygenase (50%) Aldolase-type TIM barrel (50%)" YGAKRPKPGQAAPAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0015935 (20%) GO:0005840 (0.8%)" "GO:0003735 (20%) GO:0000049 (19.6%) GO:0019843 (19.6%)" translation (20%) "small ribosomal subunit (20%) ribosome (0.8%)" "structural constituent of ribosome (20%) tRNA binding (19.6%) rRNA binding (19.6%)" "IPR005679 (33.3%) IPR006032 (33.3%) IPR012340 (33.3%)" "Ribosomal protein uS12, bacteria (33.3%) Small ribosomal subunit protein uS12 (33.3%) Nucleic acid-binding, OB-fold (33.3%)" REFIEENATYANIDA Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "5.6.2.2 (98.8%) 5.99.1.3 (1.2%)" "DNA topoisomerase (ATP-hydrolyzing) (98.8%) Transferred entry: 5.6.2.2 (1.2%)" "GO:0006265 (12.4%) GO:0006261 (11.8%) GO:0032259 (0.9%)" "GO:0005737 (12.1%) GO:0005694 (11.9%)" "GO:0003677 (12.4%) GO:0005524 (12.4%) GO:0046872 (12.4%)" "DNA topological change (12.4%) DNA-templated DNA replication (11.8%) methylation (0.9%)" "cytoplasm (12.1%) chromosome (11.9%)" "DNA binding (12.4%) ATP binding (12.4%) metal ion binding (12.4%)" "IPR000565 (7.4%) IPR001241 (7.4%) IPR002288 (7.4%)" "DNA topoisomerase, type IIA, subunit B (7.4%) DNA topoisomerase, type IIA (7.4%) DNA gyrase B subunit, C-terminal (7.4%)" AYLVNTGWNGSGKR root 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.6%) GO:0005829 (17.6%) "GO:0004612 (17.6%) GO:0005524 (17.6%) GO:0046872 (17.1%)" gluconeogenesis (17.6%) cytosol (17.6%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.6%) ATP binding (17.6%) metal ion binding (17.1%)" "IPR001272 (25.3%) IPR013035 (25.3%) IPR008210 (24.8%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.3%) Phosphoenolpyruvate carboxykinase, C-terminal (25.3%) Phosphoenolpyruvate carboxykinase, N-terminal (24.8%)" LLHIPERADIPENIKEHLIVELYSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (19.7%) GO:0042274 (19.7%)" "GO:0015935 (19.7%) GO:0005840 (0.5%) GO:1990904 (0.5%)" "GO:0019843 (20.2%) GO:0003735 (19.7%)" "translation (19.7%) ribosomal small subunit biogenesis (19.7%)" "small ribosomal subunit (19.7%) ribosome (0.5%) ribonucleoprotein complex (0.5%)" "rRNA binding (20.2%) structural constituent of ribosome (19.7%)" "IPR002942 (16.9%) IPR036986 (16.9%) IPR001912 (16.5%)" "RNA-binding S4 domain (16.9%) RNA-binding S4 domain superfamily (16.9%) Small ribosomal subunit protein uS4, N-terminal (16.5%)" HNAVEIFDEVNTGK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 4.2.1.32 (100%) L(+)-tartrate dehydratase (100%) "GO:0006099 (0.1%) GO:0044010 (0.1%) GO:1901275 (0.1%)" "GO:0005829 (0.1%) GO:1902494 (0.1%)" "GO:0046872 (32.9%) GO:0051539 (32.9%) GO:0016829 (21.8%)" "tricarboxylic acid cycle (0.1%) single-species biofilm formation (0.1%) tartrate metabolic process (0.1%)" "cytosol (0.1%) catalytic complex (0.1%)" "metal ion binding (32.9%) 4 iron, 4 sulfur cluster binding (32.9%) lyase activity (21.8%)" "IPR004646 (50.1%) IPR051208 (49.9%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (50.1%) Class-I Fumarase/Tartrate Dehydratase (49.9%)" YASEVTDVPIINAGDGANQHPSQTMLDLYSIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006207 (16.7%) GO:0006520 (16.7%) GO:0044205 (16.7%)" GO:0005829 (16.7%) "GO:0004070 (16.7%) GO:0016597 (16.7%)" "'de novo' pyrimidine nucleobase biosynthetic process (16.7%) amino acid metabolic process (16.7%) 'de novo' UMP biosynthetic process (16.7%)" cytosol (16.7%) "aspartate carbamoyltransferase activity (16.7%) amino acid binding (16.7%)" "IPR002082 (20%) IPR006130 (20%) IPR006131 (20%)" "Aspartate carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%)" LGDNAEMCFIELVDYNENMAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.2%) "GO:0022625 (33.2%) GO:0005840 (0.3%)" GO:0003735 (33.2%) translation (33.2%) "cytosolic large ribosomal subunit (33.2%) ribosome (0.3%)" structural constituent of ribosome (33.2%) "IPR000456 (33.8%) IPR036373 (33.8%) IPR047859 (32.5%)" "Large ribosomal subunit protein bL17 (33.8%) Large ribosomal subunit protein bL17 superfamily (33.8%) Large ribosomal subunit protein bL17, conserved site (32.5%)" ESLLDSEVLDSSLYGHEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides TINELQDMMNAQNAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016020 (100%) membrane (100%) "IPR006665 (33.3%) IPR036737 (33.3%) IPR050330 (33.3%)" "OmpA-like domain (33.3%) OmpA-like domain superfamily (33.3%) Bacterial Outer Membrane Structural/Functional (33.3%)" LQGVLKEEFVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.2%) GO:0005737 (19.2%) "GO:0003676 (20.2%) GO:0004816 (20.2%) GO:0005524 (20.2%)" asparaginyl-tRNA aminoacylation (20.2%) cytoplasm (19.2%) "nucleic acid binding (20.2%) asparagine-tRNA ligase activity (20.2%) ATP binding (20.2%)" "IPR004364 (14.4%) IPR004365 (14.4%) IPR004522 (14.4%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (14.4%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (14.4%) Asparagine-tRNA ligase (14.4%)" LMLPISLSFDHR root "2.3.1.12 (98.9%) 2.3.1.- (0.9%) 2.3.1.61 (0.2%)" "dihydrolipoyllysine-residue acetyltransferase (98.9%) Transferring groups other than amino-acyl groups (0.9%) dihydrolipoyllysine-residue succinyltransferase (0.2%)" "GO:0006086 (20.2%) GO:0006090 (0.1%) GO:0042867 (0.1%)" "GO:0005737 (20.1%) GO:0045254 (18.8%)" "GO:0031405 (20.1%) GO:0004742 (19.8%) GO:0016407 (0.5%)" "pyruvate decarboxylation to acetyl-CoA (20.2%) pyruvate metabolic process (0.1%) pyruvate catabolic process (0.1%)" "cytoplasm (20.1%) pyruvate dehydrogenase complex (18.8%)" "lipoic acid binding (20.1%) dihydrolipoyllysine-residue acetyltransferase activity (19.8%) acetyltransferase activity (0.5%)" "IPR001078 (11.7%) IPR023213 (11.7%) IPR050743 (11.7%)" "2-oxoacid dehydrogenase acyltransferase, catalytic domain (11.7%) Chloramphenicol acetyltransferase-like domain superfamily (11.7%) 2-oxoacid dehydrogenase family, E2 component (11.7%)" LLLGLVVGAAVGAAVGYLAATDKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR024623 (100%) Uncharacterised protein family YtxH (100%) IAIANTVASTFLLAGADVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" GAVPTQSILTITSNVEYGK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006006 (32.8%) GO:0005829 (33%) "GO:0008861 (33%) GO:0016829 (0.9%) GO:0016746 (0.2%)" glucose metabolic process (32.8%) cytosol (33%) "formate C-acetyltransferase activity (33%) lyase activity (0.9%) acyltransferase activity (0.2%)" "IPR001150 (20%) IPR004184 (20%) IPR019777 (20%)" "Glycine radical domain (20%) Pyruvate formate lyase domain (20%) Formate C-acetyltransferase glycine radical, conserved site (20%)" TDAGMFDVSHMTIVDLR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (15.7%) GO:0032259 (7.5%) GO:0006546 (0.7%)" "GO:0005829 (17.6%) GO:0005960 (16.4%)" "GO:0008483 (17.1%) GO:0004047 (16.8%) GO:0008168 (7.5%)" "glycine decarboxylation via glycine cleavage system (15.7%) methylation (7.5%) glycine catabolic process (0.7%)" "cytosol (17.6%) glycine cleavage complex (16.4%)" "transaminase activity (17.1%) aminomethyltransferase activity (16.8%) methyltransferase activity (7.5%)" "IPR006222 (15%) IPR027266 (15%) IPR028896 (15%)" "GCVT, N-terminal domain (15%) Aminomethyltransferase superfamily (15%) Aminomethyltransferase-like (15%)" SHEVQHMCVVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales AAYPEVAKLDNDGLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (1.4%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (1.4%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" LGLIHDTADLYR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.5.1.2 (100%) DNA ligase (NAD(+)) (100%) "GO:0006260 (16.7%) GO:0006281 (16.7%)" GO:0005829 (16.7%) "GO:0003677 (16.7%) GO:0003911 (16.7%) GO:0046872 (16.7%)" "DNA replication (16.7%) DNA repair (16.7%)" cytosol (16.7%) "DNA binding (16.7%) DNA ligase (NAD+) activity (16.7%) metal ion binding (16.7%)" "IPR001357 (8.3%) IPR001679 (8.3%) IPR003583 (8.3%)" "BRCT domain (8.3%) NAD-dependent DNA ligase (8.3%) Helix-hairpin-helix DNA-binding motif, class 1 (8.3%)" SSHVWNVDIFTSTDKLVSSVR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae "3.-.-.- (75%) 3.1.3.23 (25%)" "Hydrolases (75%) sugar-phosphatase (25%)" GO:0005829 (25%) "GO:0000287 (25%) GO:0016289 (25%) GO:0016791 (23.4%)" cytosol (25%) "magnesium ion binding (25%) acyl-CoA hydrolase activity (25%) phosphatase activity (23.4%)" "IPR000150 (14.3%) IPR003736 (14.3%) IPR006379 (14.3%)" "Cof family (14.3%) Phenylacetic acid degradation-related domain (14.3%) HAD-superfamily hydrolase, subfamily IIB (14.3%)" KAFAEAEGVVLQDEPANKDYPMPLFVADHDPVYVGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000534 (20%) IPR005986 (20%) IPR012080 (20%)" "Semialdehyde dehydrogenase, NAD-binding (20%) Aspartate-semialdehyde dehydrogenase, beta-type (20%) Aspartate-semialdehyde dehydrogenase (20%)" EMAHQQIGMEVLNR root 6.1.1.3 (100%) threonine--tRNA ligase (100%) "GO:0032790 (19.8%) GO:0006435 (0.1%) GO:0001731 (0%)" "GO:0005829 (19.8%) GO:0016020 (19.7%) GO:0005840 (0%)" "GO:0003743 (20.3%) GO:0043022 (19.8%) GO:0000049 (0.1%)" "ribosome disassembly (19.8%) threonyl-tRNA aminoacylation (0.1%) formation of translation preinitiation complex (0%)" "cytosol (19.8%) membrane (19.7%) ribosome (0%)" "translation initiation factor activity (20.3%) ribosome binding (19.8%) tRNA binding (0.1%)" "IPR001288 (17.8%) IPR019815 (17.8%) IPR036788 (17.8%)" "Translation initiation factor 3 (17.8%) Translation initiation factor 3, C-terminal (17.8%) Translation initiation factor 3 (IF-3), C-terminal domain superfamily (17.8%)" GAIQKAEEIVASNPEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.5.1.47 (99.4%) 4.5.1.5 (0.6%)" "cysteine synthase (99.4%) S-carboxymethylcysteine synthase (0.6%)" "GO:0006535 (37%) GO:0008652 (0.3%) GO:1901605 (0.3%)" "GO:0005737 (0.3%) GO:0005829 (0.3%) GO:0009333 (0.3%)" "GO:0004124 (37.2%) GO:0016829 (19.6%) GO:0016740 (1.8%)" "cysteine biosynthetic process from serine (37%) amino acid biosynthetic process (0.3%) alpha-amino acid metabolic process (0.3%)" "cytoplasm (0.3%) cytosol (0.3%) cysteine synthase complex (0.3%)" "cysteine synthase activity (37.2%) lyase activity (19.6%) transferase activity (1.8%)" "IPR001926 (17.2%) IPR036052 (17.2%) IPR050214 (17.2%)" "Tryptophan synthase beta chain-like, PALP domain (17.2%) Tryptophan synthase beta chain-like, PALP domain superfamily (17.2%) Cysteine synthase/Cystathionine beta-synthase (17.2%)" SVANSQDIDLVVDANAVAYNSSDVKDITADVLK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0050821 (23.6%) GO:0061077 (2.2%) GO:0006457 (0.3%)" "GO:0005829 (23.6%) GO:0042597 (23%) GO:0030288 (0.3%)" "GO:0051082 (23.6%) GO:0003677 (1.9%) GO:0001530 (0.3%)" "protein stabilization (23.6%) obsolete chaperone-mediated protein folding (2.2%) protein folding (0.3%)" "cytosol (23.6%) periplasmic space (23%) outer membrane-bounded periplasmic space (0.3%)" "unfolded protein binding (23.6%) DNA binding (1.9%) lipopolysaccharide binding (0.3%)" "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" ILTEGVHKEDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.1.45 (100%) thymidylate synthase (100%) "GO:0006231 (20%) GO:0006235 (20%) GO:0032259 (20%)" GO:0005829 (20%) GO:0004799 (20%) "dTMP biosynthetic process (20%) dTTP biosynthetic process (20%) methylation (20%)" cytosol (20%) thymidylate synthase activity (20%) "IPR000398 (20%) IPR020940 (20%) IPR023451 (20%)" "Thymidylate synthase (20%) Thymidylate synthase, active site (20%) Thymidylate synthase/dCMP hydroxymethylase domain (20%)" AVMECAGITDVLTK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae "GO:0006412 (17%) GO:0042254 (15.9%)" "GO:0015935 (17%) GO:0005737 (15.9%) GO:0005840 (0.3%)" "GO:0003735 (17%) GO:0019843 (17%)" "translation (17%) ribosome biogenesis (15.9%)" "small ribosomal subunit (17%) cytoplasm (15.9%) ribosome (0.3%)" "structural constituent of ribosome (17%) rRNA binding (17%)" "IPR000851 (14.3%) IPR005324 (14.3%) IPR005712 (14.3%)" "Small ribosomal subunit protein uS5 (14.3%) Small ribosomal subunit protein uS5, C-terminal (14.3%) Small ribosomal subunit protein uS5, bacteria (14.3%)" GHGHIINIGSIAGDAAYPGGSVYCATK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0016616 (93.3%) GO:0031132 (6.7%)" "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (93.3%) serine 3-dehydrogenase activity (6.7%)" "IPR002347 (33.3%) IPR020904 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Short-chain dehydrogenase/reductase, conserved site (33.3%) NAD(P)-binding domain superfamily (33.3%)" LFNEILAADNAPAEAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.7.1 (72.7%) 1.2.7.- (27.3%)" "pyruvate synthase (72.7%) With an iron-sulfur protein as acceptor (27.3%)" "GO:0006979 (15.2%) GO:0022900 (15.2%) GO:0044281 (8.9%)" "GO:0005506 (15.2%) GO:0030976 (15.2%) GO:0051539 (15.2%)" "response to oxidative stress (15.2%) electron transport chain (15.2%) small molecule metabolic process (8.9%)" "iron ion binding (15.2%) thiamine pyrophosphate binding (15.2%) 4 iron, 4 sulfur cluster binding (15.2%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" KQIYHCNEGHAALINAQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0030170 (33.3%) GO:0008184 (32.4%) GO:0004645 (0.9%)" carbohydrate metabolic process (33.3%) "pyridoxal phosphate binding (33.3%) glycogen phosphorylase activity (32.4%) 1,4-alpha-oligoglucan phosphorylase activity (0.9%)" "IPR011834 (25.2%) IPR024517 (25.2%) IPR052182 (25.2%)" "Alpha-glucan phosphorylase (25.2%) Glycogen phosphorylase, domain of unknown function DUF3417 (25.2%) Glycogen_Maltodextrin_Phosphorylase (25.2%)" SALEVVMTVLHAGGKFDK root 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (12.7%) GO:0006261 (12%) GO:0032259 (0%)" "GO:0005694 (12.3%) GO:0005737 (12%)" "GO:0003677 (12.8%) GO:0005524 (12.8%) GO:0046872 (12.4%)" "DNA topological change (12.7%) DNA-templated DNA replication (12%) methylation (0%)" "chromosome (12.3%) cytoplasm (12%)" "DNA binding (12.8%) ATP binding (12.8%) metal ion binding (12.4%)" "IPR003594 (7.5%) IPR001241 (7.5%) IPR036890 (7.5%)" "Histidine kinase/HSP90-like ATPase domain (7.5%) DNA topoisomerase, type IIA (7.5%) Histidine kinase/HSP90-like ATPase superfamily (7.5%)" IDNVLVCPNSNCISHAEPVSSSFAVR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006207 (21.7%) GO:0006221 (21.7%)" "GO:0009347 (21.7%) GO:0005737 (0.2%)" "GO:0046872 (21.4%) GO:0016740 (12.8%) GO:0004070 (0.2%)" "'de novo' pyrimidine nucleobase biosynthetic process (21.7%) pyrimidine nucleotide biosynthetic process (21.7%)" "aspartate carbamoyltransferase complex (21.7%) cytoplasm (0.2%)" "metal ion binding (21.4%) transferase activity (12.8%) aspartate carbamoyltransferase activity (0.2%)" "IPR002801 (20%) IPR020542 (20%) IPR020545 (20%)" "Aspartate transcarbamylase regulatory subunit (20%) Aspartate carbamoyltransferase regulatory subunit, C-terminal (20%) Aspartate carbamoyltransferase regulatory subunit, N-terminal (20%)" ASSNNYYGGGISQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0016787 (50%) GO:0046872 (50%)" "hydrolase activity (50%) metal ion binding (50%)" IPR039461 (100%) Peptidase family M49 (100%) ANSTAPAINVIESDKDYRVEVAAPGMTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" DIAGTLIAFLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR002931 (33.6%) IPR038765 (33.6%) IPR024618 (32.7%)" "Transglutaminase-like (33.6%) Papain-like cysteine peptidase superfamily (33.6%) Domain of unknown function DUF3857 (32.7%)" VLMLEADNFFGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.7%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.7%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011260 (16.7%) IPR011262 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.7%) DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" FNTELDELLKER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) GO:0042777 (23.6%) "GO:0005524 (23.6%) GO:0046933 (23.6%) GO:0046961 (23.6%)" proton motive force-driven plasma membrane ATP synthesis (23.6%) "ATP binding (23.6%) proton-transporting ATP synthase activity, rotational mechanism (23.6%) proton-transporting ATPase activity, rotational mechanism (23.6%)" "IPR000194 (14.3%) IPR004100 (14.3%) IPR020003 (14.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (14.3%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (14.3%)" LLESVTPYEKER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.1.-.- (100%) Acting on ester bonds (100%) "GO:0004521 (50%) GO:0016787 (50%)" "RNA endonuclease activity (50%) hydrolase activity (50%)" "IPR005229 (33.3%) IPR013527 (33.3%) IPR013551 (33.3%)" "Endoribonuclease YicC/YloC-like (33.3%) Endoribonuclease YicC-like, N-terminal (33.3%) Endoribonuclease YicC-like, C-terminal (33.3%)" GFIDVFDEEAHKLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.2%) "GO:0003921 (33.2%) GO:0005524 (33.2%) GO:0008483 (0.3%)" cytosol (33.2%) "GMP synthase activity (33.2%) ATP binding (33.2%) transaminase activity (0.3%)" "IPR001674 (12.8%) IPR014729 (12.8%) IPR025777 (12.8%)" "GMP synthase, C-terminal (12.8%) Rossmann-like alpha/beta/alpha sandwich fold (12.8%) GMP synthetase ATP pyrophosphatase domain (12.8%)" QRPLWASTGTK root 2.2.1.2 (100%) transaldolase (100%) "GO:0006098 (24.4%) GO:0005975 (23.9%) GO:0006094 (0.7%)" GO:0005737 (24.4%) "GO:0004801 (24.4%) GO:0004347 (0.7%) GO:0097367 (0.7%)" "pentose-phosphate shunt (24.4%) carbohydrate metabolic process (23.9%) gluconeogenesis (0.7%)" cytoplasm (24.4%) "transaldolase activity (24.4%) glucose-6-phosphate isomerase activity (0.7%) carbohydrate derivative binding (0.7%)" "IPR013785 (25.8%) IPR001585 (25.7%) IPR004732 (25.5%)" "Aldolase-type TIM barrel (25.8%) Transaldolase/Fructose-6-phosphate aldolase (25.7%) Transaldolase type 2 (25.5%)" DVEGPTYDEAVHQQIEEVQAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0044281 (33.3%) "GO:0016625 (33.3%) GO:0030976 (33.3%)" small molecule metabolic process (33.3%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (33.3%) thiamine pyrophosphate binding (33.3%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" HFGCQSGINITASHNPR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.2.2 (58.3%) 5.4.2.- (41.7%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (58.3%) Phosphotransferases (phosphomutases) (41.7%)" "GO:0005975 (24.1%) GO:0006166 (24.1%)" "GO:0000287 (24.1%) GO:0008973 (24.1%) GO:0004614 (3.7%)" "carbohydrate metabolic process (24.1%) purine ribonucleoside salvage (24.1%)" "magnesium ion binding (24.1%) phosphopentomutase activity (24.1%) phosphoglucomutase activity (3.7%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" GELVQEVNPDINVTLEDGVIHLTRPTDDKNHR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0002181 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" cytoplasmic translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000702 (20%) IPR002358 (20%) IPR019906 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, conserved site (20%) Large ribosomal subunit protein uL6, bacteria (20%)" HIGVAISGNEEDALLVNK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0000303 (1.1%) GO:0006950 (1.1%) GO:0009411 (1.1%)" "GO:0005737 (93.4%) GO:0005829 (1.1%)" GO:0042803 (1.1%) "response to superoxide (1.1%) response to stress (1.1%) response to UV (1.1%)" "cytoplasm (93.4%) cytosol (1.1%)" protein homodimerization activity (1.1%) "IPR006015 (33.3%) IPR006016 (33.3%) IPR014729 (33.3%)" "Universal stress protein A family (33.3%) UspA (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (33.3%)" NFVIDTNVILHDYNCLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25.1%) IPR003714 (25.1%) IPR051451 (25.1%)" "PIN domain (25.1%) PhoH-like protein (25.1%) PhoH2-like (25.1%)" TPSAVGYQPTLATEMGR Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0005886 (21.2%) GO:0045259 (21.2%)" "GO:0005524 (21.2%) GO:0046933 (21.2%) GO:0016787 (15.2%)" "plasma membrane (21.2%) proton-transporting ATP synthase complex (21.2%)" "ATP binding (21.2%) proton-transporting ATP synthase activity, rotational mechanism (21.2%) hydrolase activity (15.2%)" "IPR000194 (10%) IPR003593 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" IISKYENHIPVEVVFQDLNDLPEGFTCPEGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016740 (100%) transferase activity (100%) IPR029044 (100%) Nucleotide-diphospho-sugar transferases (100%) FGVEDGSVEGLR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.7%) GO:0051301 (12.3%) GO:0043335 (11.4%)" "GO:0005737 (12.2%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0003755 (12.7%) GO:0043022 (11.4%) GO:0044183 (11.4%)" "protein transport (12.7%) cell division (12.3%) protein unfolding (11.4%)" "cytoplasm (12.2%) cytosol (0.1%) membrane (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (12.7%) ribosome binding (11.4%) protein folding chaperone (11.4%)" "IPR037041 (13%) IPR008880 (12.8%) IPR027304 (12.8%)" "Trigger factor, C-terminal domain superfamily (13%) Trigger factor, C-terminal (12.8%) Trigger factor/SurA domain superfamily (12.8%)" KVEGVGYSQYNESETPEQNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (20%) IPR006665 (20%) IPR036737 (20%)" "Outer membrane protein, bacterial (20%) OmpA-like domain (20%) OmpA-like domain superfamily (20%)" IRFPEHCGIGIKPCSEEGTKR root "1.1.1.42 (99.9%) 1.1.1.- (0.1%)" "isocitrate dehydrogenase (NADP(+)) (99.9%) With NAD(+) or NADP(+) as acceptor (0.1%)" "GO:0006099 (21.4%) GO:0006097 (17.9%) GO:0006979 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004450 (21.4%) GO:0000287 (17.8%) GO:0051287 (17.8%)" "tricarboxylic acid cycle (21.4%) glyoxylate cycle (17.9%) response to oxidative stress (0%)" "cytoplasm (0%) cytosol (0%)" "isocitrate dehydrogenase (NADP+) activity (21.4%) magnesium ion binding (17.8%) NAD binding (17.8%)" "IPR004439 (35.3%) IPR024084 (35.3%) IPR019818 (29.4%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (35.3%) Isopropylmalate dehydrogenase-like domain (35.3%) Isocitrate/isopropylmalate dehydrogenase, conserved site (29.4%)" IVQFTDIHWDQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (50%) GO:0016788 (50%) cytoplasm (50%) hydrolase activity, acting on ester bonds (50%) "IPR004843 (25.3%) IPR029052 (25.3%) IPR011658 (24%)" "Calcineurin-like, phosphoesterase domain (25.3%) Metallo-dependent phosphatase-like (25.3%) PA14 domain (24%)" IVNITDKLGIPYVFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.5.1.55 (100%) 3-deoxy-8-phosphooctulonate synthase (100%) GO:0009103 (29.6%) GO:0005737 (35.2%) GO:0008676 (35.2%) lipopolysaccharide biosynthetic process (29.6%) cytoplasm (35.2%) 3-deoxy-8-phosphooctulonate synthase activity (35.2%) "IPR006218 (33.3%) IPR006269 (33.3%) IPR013785 (33.3%)" "DAHP synthetase I/KDSA (33.3%) 3-deoxy-8-phosphooctulonate synthase (33.3%) Aldolase-type TIM barrel (33.3%)" VSSEDEALGIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) EKNAFIRPSPSAGSLGGVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.6.5.- (57.6%) 3.6.-.- (30.3%) 2.7.-.- (12.1%)" "Acting on GTP; involved in cellular and subcellular movement (57.6%) Acting on acid anhydrides (30.3%) Transferring phosphorus-containing groups (12.1%)" GO:0005737 (32%) "GO:0003924 (32%) GO:0005525 (32%) GO:0016301 (2.7%)" cytoplasm (32%) "GTPase activity (32%) GTP binding (32%) kinase activity (2.7%)" "IPR005129 (50%) IPR027417 (50%)" "SIMIBI class G3E GTPase, ArgK/MeaB (50%) P-loop containing nucleoside triphosphate hydrolase (50%)" GVGFNTQMAGEPDKDFSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0034605 (18.8%) GO:0006508 (12.5%)" GO:0005737 (18.8%) "GO:0005524 (18.8%) GO:0016887 (18.8%) GO:0008233 (12.5%)" "cellular response to heat (18.8%) proteolysis (12.5%)" cytoplasm (18.8%) "ATP binding (18.8%) ATP hydrolysis activity (18.8%) peptidase activity (12.5%)" "IPR001270 (8.3%) IPR001943 (8.3%) IPR003593 (8.3%)" "ClpA/B family (8.3%) UVR domain (8.3%) AAA+ ATPase domain (8.3%)" ILSKEQLDYMFDMMYAPDNILK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0006508 (14.3%) "GO:0016747 (71.4%) GO:0008233 (14.3%)" proteolysis (14.3%) "acyltransferase activity, transferring groups other than amino-acyl groups (71.4%) peptidase activity (14.3%)" "IPR000182 (50%) IPR016181 (50%)" "GNAT domain (50%) Acyl-CoA N-acyltransferase (50%)" SCFPWQNAYYPADR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.6%) GO:0006164 (0.7%)" GO:0005737 (20.3%) "GO:0004642 (20.3%) GO:0005524 (19.6%) GO:0046872 (19.6%)" "'de novo' IMP biosynthetic process (19.6%) purine nucleotide biosynthetic process (0.7%)" cytoplasm (20.3%) "phosphoribosylformylglycinamidine synthase activity (20.3%) ATP binding (19.6%) metal ion binding (19.6%)" "IPR029062 (11.5%) IPR010073 (11.1%) IPR010918 (11.1%)" "Class I glutamine amidotransferase-like (11.5%) Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%)" GFMTTIHAYTNDQNTLDAPHGK Bacillota Bacteria Bacillati Bacillota 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0006006 (25%) "GO:0016620 (25%) GO:0050661 (25%) GO:0051287 (25%)" glucose metabolic process (25%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (25%) NADP binding (25%) NAD binding (25%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" EFADLEQIKVVIGHDCR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (23.3%) GO:0006166 (23.3%)" "GO:0000287 (23.3%) GO:0008973 (23.3%) GO:0004614 (7%)" "carbohydrate metabolic process (23.3%) purine ribonucleoside salvage (23.3%)" "magnesium ion binding (23.3%) phosphopentomutase activity (23.3%) phosphoglucomutase activity (7%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" GVKDDHVHFLDLPFYETGLVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.5%) GO:0006044 (32.5%)" "GO:0004342 (32.5%) GO:0016853 (2.5%)" "carbohydrate metabolic process (32.5%) N-acetylglucosamine metabolic process (32.5%)" "glucosamine-6-phosphate deaminase activity (32.5%) isomerase activity (2.5%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" FGIATAADLGEAPYKITIDGEKVIETETLIIATGASAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.8.1.9 (100%) thioredoxin-disulfide reductase (NADPH) (100%) GO:0019430 (33.3%) GO:0005737 (33.3%) GO:0004791 (33.3%) removal of superoxide radicals (33.3%) cytoplasm (33.3%) thioredoxin-disulfide reductase (NADPH) activity (33.3%) "IPR005982 (20%) IPR008255 (20%) IPR023753 (20%)" "Thioredoxin reductase (20%) Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (20%) FAD/NAD(P)-binding domain (20%)" KTVYQVVSGGQEFIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.6.1.- (100%) In phosphorus-containing anhydrides (100%) "GO:0006412 (12.5%) GO:0045900 (12.5%)" GO:0005737 (12.5%) "GO:0000049 (12.5%) GO:0005524 (12.5%) GO:0016887 (12.5%)" "translation (12.5%) negative regulation of translational elongation (12.5%)" cytoplasm (12.5%) "tRNA binding (12.5%) ATP binding (12.5%) ATP hydrolysis activity (12.5%)" "IPR003439 (16.7%) IPR003593 (16.7%) IPR017871 (16.7%)" "ABC transporter-like, ATP-binding domain (16.7%) AAA+ ATPase domain (16.7%) ABC transporter-like, conserved site (16.7%)" SMTGHLLGAAGAVESIASILAIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.2%) GO:0005829 (33.2%) "GO:0004315 (33.2%) GO:0016746 (0.5%)" fatty acid biosynthetic process (33.2%) cytosol (33.2%) "3-oxoacyl-[acyl-carrier-protein] synthase activity (33.2%) acyltransferase activity (0.5%)" "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" LYYSPGYGPASLYDYK root "GO:0044718 (24.5%) GO:0019271 (0.3%)" "GO:0009279 (26.2%) GO:0016020 (0.2%)" "GO:0015344 (24.8%) GO:0038023 (23.8%) GO:0047091 (0.2%)" "siderophore transmembrane transport (24.5%) aerobactin transport (0.3%)" "cell outer membrane (26.2%) membrane (0.2%)" "siderophore uptake transmembrane transporter activity (24.8%) signaling receptor activity (23.8%) L-lysine 6-monooxygenase (NADPH) activity (0.2%)" "IPR036942 (14.1%) IPR010917 (13.9%) IPR000531 (13.7%)" "TonB-dependent receptor-like, beta-barrel domain superfamily (14.1%) TonB-dependent receptor, conserved site (13.9%) TonB-dependent receptor-like, beta-barrel (13.7%)" VNAGSDVLNFCANNYLGLSDNQR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (14.4%) GO:0030148 (14.4%)" "GO:0005829 (14.4%) GO:0016020 (14.4%)" "GO:0008890 (14.4%) GO:0030170 (14.4%) GO:0016874 (7.2%)" "L-threonine catabolic process to glycine (14.4%) sphingolipid biosynthetic process (14.4%)" "cytosol (14.4%) membrane (14.4%)" "glycine C-acetyltransferase activity (14.4%) pyridoxal phosphate binding (14.4%) ligase activity (7.2%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" IQRPWLVTSCEWNDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.2%) GO:0006044 (32.2%)" "GO:0004342 (33%) GO:0016853 (2.7%)" "carbohydrate metabolic process (32.2%) N-acetylglucosamine metabolic process (32.2%)" "glucosamine-6-phosphate deaminase activity (33%) isomerase activity (2.7%)" "IPR037171 (14.9%) IPR052960 (14.9%) IPR003737 (14.5%)" "NagB/RpiA transferase-like (14.9%) Glucosamine-6-phosphate deaminase-like (14.9%) N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.5%)" VHEGDDLTNADRGSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.3%) "GO:0003746 (25.3%) GO:0005525 (25.3%) GO:0003924 (24.1%)" ribosome disassembly (25.3%) "translation elongation factor activity (25.3%) GTP binding (25.3%) GTPase activity (24.1%)" "IPR009000 (8%) IPR027417 (8%) IPR053905 (8%)" "Translation protein, beta-barrel domain superfamily (8%) P-loop containing nucleoside triphosphate hydrolase (8%) Elongation factor G-like, domain II (8%)" VTEKETTFNELMNQQA Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.7%) GO:0051301 (12.1%) GO:0043335 (11.4%)" "GO:0005737 (11.8%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0003755 (12.6%) GO:0043022 (11.4%) GO:0044183 (11.4%)" "protein transport (12.7%) cell division (12.1%) protein unfolding (11.4%)" "cytoplasm (11.8%) cytosol (0.1%) membrane (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (12.6%) ribosome binding (11.4%) protein folding chaperone (11.4%)" "IPR027304 (13.2%) IPR037041 (13.2%) IPR008880 (12.9%)" "Trigger factor/SurA domain superfamily (13.2%) Trigger factor, C-terminal domain superfamily (13.2%) Trigger factor, C-terminal (12.9%)" RGDYTFALDNDKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (22.4%) GO:0046034 (1.7%)" "GO:0005524 (24.1%) GO:0046961 (24.1%) GO:0046933 (22.4%)" "proton motive force-driven plasma membrane ATP synthesis (22.4%) ATP metabolic process (1.7%)" "ATP binding (24.1%) proton-transporting ATPase activity, rotational mechanism (24.1%) proton-transporting ATP synthase activity, rotational mechanism (22.4%)" "IPR000194 (14.7%) IPR022878 (14.7%) IPR027417 (14.7%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14.7%) V-type ATP synthase catalytic alpha chain (14.7%) P-loop containing nucleoside triphosphate hydrolase (14.7%)" FMQGKPVAEQEIGKQLLLETAAYAESSICR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.6.2.4 (100%) DNA 3'-5' helicase (100%) "GO:0006260 (8.5%) GO:0006281 (8.5%) GO:0006310 (8.5%)" "GO:0005737 (8.5%) GO:0030894 (8.5%) GO:0043590 (8.5%)" "GO:0009378 (8.5%) GO:0043138 (8.5%) GO:0003677 (8%)" "DNA replication (8.5%) DNA repair (8.5%) DNA recombination (8.5%)" "cytoplasm (8.5%) replisome (8.5%) bacterial nucleoid (8.5%)" "four-way junction helicase activity (8.5%) 3'-5' DNA helicase activity (8.5%) DNA binding (8%)" "IPR001650 (7.4%) IPR018982 (7.4%) IPR027417 (7.4%)" "Helicase, C-terminal domain-like (7.4%) RQC domain (7.4%) P-loop containing nucleoside triphosphate hydrolase (7.4%)" RLELMKPNAILINTSR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.1.1.29 (75%) 1.1.1.290 (25%)" "glycerate dehydrogenase (75%) 4-phosphoerythronate dehydrogenase (25%)" "GO:0051287 (50%) GO:0016616 (38.9%) GO:0008465 (8.3%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (38.9%) hydroxypyruvate reductase (NADH) activity (8.3%)" "IPR006139 (20%) IPR006140 (20%) IPR029753 (20%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (20%)" MLNETPALAPDGQPYR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (19.9%) GO:0033499 (19.9%) GO:0005975 (0.1%)" "GO:0005737 (19.9%) GO:0016020 (0%)" "GO:0004034 (20%) GO:0030246 (20%) GO:0016853 (0.1%)" "glucose metabolic process (19.9%) galactose catabolic process via UDP-galactose, Leloir pathway (19.9%) carbohydrate metabolic process (0.1%)" "cytoplasm (19.9%) membrane (0%)" "aldose 1-epimerase activity (20%) carbohydrate binding (20%) isomerase activity (0.1%)" "IPR011013 (14.5%) IPR014718 (14.5%) IPR008183 (14.5%)" "Galactose mutarotase-like domain superfamily (14.5%) Glycoside hydrolase-type carbohydrate-binding (14.5%) Aldose 1-/Glucose-6-phosphate 1-epimerase (14.5%)" RGSFVYVTPNTNFVSVKGEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR025347 (100%) Protein of unknown function DUF4251 (100%) RFNKEAASHPDTVVLAVSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" IVELPLNEEEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.37 (94.4%) 1.1.1.- (5.6%)" "malate dehydrogenase (94.4%) With NAD(+) or NADP(+) as acceptor (5.6%)" "GO:0006089 (24.6%) GO:0006099 (24.6%)" "GO:0004459 (24.6%) GO:0030060 (24.6%) GO:0016616 (1.5%)" "lactate metabolic process (24.6%) tricarboxylic acid cycle (24.6%)" "L-lactate dehydrogenase (NAD+) activity (24.6%) L-malate dehydrogenase (NAD+) activity (24.6%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (1.5%)" "IPR022383 (17.9%) IPR001236 (16.8%) IPR011275 (16.8%)" "Lactate/malate dehydrogenase, C-terminal (17.9%) Lactate/malate dehydrogenase, N-terminal (16.8%) Malate dehydrogenase, type 3 (16.8%)" HYEIVFMVHPDQSEQVPGMIER Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (24.8%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (24.7%) GO:0005840 (0.5%) GO:1990904 (0.1%)" "GO:0003735 (24.9%) GO:0070181 (24.7%) GO:0019843 (0.2%)" "translation (24.8%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.7%) ribosome (0.5%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.9%) small ribosomal subunit rRNA binding (24.7%) rRNA binding (0.2%)" "IPR035980 (20.7%) IPR000529 (20.6%) IPR014717 (20.6%)" "Small ribosomal subunit protein bS6 superfamily (20.7%) Small ribosomal subunit protein bS6 (20.6%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (20.6%)" IEDDKAIYANHWK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (10%) GO:0008564 (1.1%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (10%) protein-exporting ATPase activity (1.1%)" "IPR000185 (8.3%) IPR011115 (8.3%) IPR014018 (8.3%)" "Protein translocase subunit SecA (8.3%) SecA DEAD-like, N-terminal (8.3%) SecA motor DEAD (8.3%)" GPVASICYQGLMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0017038 (50%) GO:0005886 (50%) protein import (50%) plasma membrane (50%) "IPR002898 (50%) IPR050790 (50%)" "MotA/TolQ/ExbB proton channel (50%) ExbB/TolQ Biopolymer Transport (50%)" HRDLLGATNPANALAGTLR root 2.7.4.6 (100%) nucleoside-diphosphate kinase (100%) "GO:0006183 (14.2%) GO:0006228 (14.2%) GO:0006241 (14.2%)" "GO:0005737 (14.1%) GO:0005829 (0%)" "GO:0004550 (14.2%) GO:0005524 (14.2%) GO:0046872 (14.2%)" "GTP biosynthetic process (14.2%) UTP biosynthetic process (14.2%) CTP biosynthetic process (14.2%)" "cytoplasm (14.1%) cytosol (0%)" "nucleoside diphosphate kinase activity (14.2%) ATP binding (14.2%) metal ion binding (14.2%)" "IPR001564 (25.1%) IPR034907 (25.1%) IPR036850 (25.1%)" "Nucleoside diphosphate kinase (25.1%) Nucleoside diphosphate kinase-like domain (25.1%) Nucleoside diphosphate kinase-like domain superfamily (25.1%)" YTNDELLEAFGEMTLVELSEFVK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" ILALSEIAWSPLDRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) "GO:0005975 (25%) GO:0030203 (25%)" GO:0016020 (25%) GO:0004563 (25%) "carbohydrate metabolic process (25%) glycosaminoglycan metabolic process (25%)" membrane (25%) beta-N-acetylhexosaminidase activity (25%) "IPR011658 (16.7%) IPR015882 (16.7%) IPR015883 (16.7%)" "PA14 domain (16.7%) Beta-hexosaminidase, bacterial type, N-terminal (16.7%) Glycoside hydrolase family 20, catalytic domain (16.7%)" FGASSLLASLLK root "4.1.2.4 (99.9%) 4.-.-.- (0.1%)" "deoxyribose-phosphate aldolase (99.9%) Lyases (0.1%)" "GO:0009264 (20%) GO:0016052 (20%) GO:0006018 (19.4%)" "GO:0005737 (19.9%) GO:0005829 (0.1%) GO:0016020 (0%)" "GO:0004139 (20.1%) GO:0016829 (0.4%) GO:0004645 (0%)" "deoxyribonucleotide catabolic process (20%) carbohydrate catabolic process (20%) 2-deoxyribose 1-phosphate catabolic process (19.4%)" "cytoplasm (19.9%) cytosol (0.1%) membrane (0%)" "deoxyribose-phosphate aldolase activity (20.1%) lyase activity (0.4%) 1,4-alpha-oligoglucan phosphorylase activity (0%)" "IPR013785 (25.2%) IPR002915 (25.1%) IPR011343 (25.1%)" "Aldolase-type TIM barrel (25.2%) DeoC/FbaB/LacD aldolase (25.1%) Deoxyribose-phosphate aldolase (25.1%)" IAISERPALNS root "GO:0050821 (49.6%) GO:0009408 (0.3%) GO:1990169 (0.3%)" GO:0005737 (49.6%) GO:0042802 (0.3%) "protein stabilization (49.6%) response to heat (0.3%) stress response to copper ion (0.3%)" cytoplasm (49.6%) identical protein binding (0.3%) "IPR002068 (25.6%) IPR008978 (25.6%) IPR037913 (24.7%)" "Alpha crystallin/Hsp20 domain (25.6%) HSP20-like chaperone (25.6%) Small heat shock protein IbpA/IbpB, ACD domain (24.7%)" DIGAQYIIIGHSERR root 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0019563 (16.6%)" "GO:0005829 (16.6%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0004807 (16.6%) GO:0016853 (0.2%) GO:0042802 (0%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) glycerol catabolic process (16.6%)" "cytosol (16.6%) cytoplasm (0%) membrane (0%)" "triose-phosphate isomerase activity (16.6%) isomerase activity (0.2%) identical protein binding (0%)" "IPR000652 (20.3%) IPR013785 (20.3%) IPR035990 (20.3%)" "Triosephosphate isomerase (20.3%) Aldolase-type TIM barrel (20.3%) Triosephosphate isomerase superfamily (20.3%)" INLNQPMADILK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004647 (16.9%) IPR020557 (16.9%) IPR036660 (16.9%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.9%) Fumarate lyase, conserved site (16.9%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (16.9%)" SYIPALSALIEMAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.1 (100%) alpha-amylase (100%) GO:0005975 (50%) "GO:0003824 (36.5%) GO:0016787 (7.7%) GO:0016798 (3.8%)" carbohydrate metabolic process (50%) "catalytic activity (36.5%) hydrolase activity (7.7%) hydrolase activity, acting on glycosyl bonds (3.8%)" "IPR004300 (33.3%) IPR011330 (33.3%) IPR052046 (33.3%)" "Glycoside hydrolase family 57, N-terminal domain (33.3%) Glycoside hydrolase/deacetylase, beta/alpha-barrel (33.3%) Glycosyl hydrolase family 57 (33.3%)" ASSLYTVHTPVPAGHDYFDEGLFNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.2%) "GO:0008184 (33.2%) GO:0030170 (33.2%) GO:0016757 (0.4%)" carbohydrate metabolic process (33.2%) "glycogen phosphorylase activity (33.2%) pyridoxal phosphate binding (33.2%) glycosyltransferase activity (0.4%)" "IPR000811 (25.2%) IPR011834 (25.2%) IPR052182 (25.2%)" "Glycosyl transferase, family 35 (25.2%) Alpha-glucan phosphorylase (25.2%) Glycogen_Maltodextrin_Phosphorylase (25.2%)" YGDEQVKQWR root "5.4.2.11 (99.4%) 5.4.2.- (0.3%) 5.4.2.1 (0.1%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (99.4%) Phosphotransferases (phosphomutases) (0.3%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.1%)" "GO:0006096 (33.2%) GO:0006094 (33%) GO:0061621 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004619 (32.8%) GO:0016868 (0.4%) GO:0016853 (0.3%)" "glycolytic process (33.2%) gluconeogenesis (33%) canonical glycolysis (0%)" "cytoplasm (0%) cytosol (0%)" "phosphoglycerate mutase activity (32.8%) intramolecular phosphotransferase activity (0.4%) isomerase activity (0.3%)" "IPR005952 (25.2%) IPR029033 (25.1%) IPR013078 (25.1%)" "Phosphoglycerate mutase 1 (25.2%) Histidine phosphatase superfamily (25.1%) Histidine phosphatase superfamily, clade-1 (25.1%)" YTGNKDAAAAVGK root "GO:0006412 (24.7%) GO:0002181 (0.1%)" "GO:0022625 (24.8%) GO:0005840 (0.5%) GO:0005737 (0%)" "GO:0003735 (24.9%) GO:0008097 (24.8%) GO:0019843 (0%)" "translation (24.7%) cytoplasmic translation (0.1%)" "cytosolic large ribosomal subunit (24.8%) ribosome (0.5%) cytoplasm (0%)" "structural constituent of ribosome (24.9%) 5S rRNA binding (24.8%) rRNA binding (0%)" "IPR005484 (34.2%) IPR004389 (34.1%) IPR057268 (31.2%)" "Large ribosomal subunit protein uL18, bacterial/plantae/animalia (34.2%) Large ribosomal subunit protein uL18, bacteria (34.1%) Large ribosomal subunit protein uL18 (31.2%)" ASAHSIIAVVPYFGWAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" MINIVIFGAPGSGK Bacteria Bacteria "2.7.4.3 (98.3%) 2.7.4.- (1.7%)" "adenylate kinase (98.3%) Phosphotransferases with a phosphate group as acceptor (1.7%)" "GO:0044209 (23.9%) GO:0006139 (0.3%) GO:0009123 (0.2%)" "GO:0005737 (24.3%) GO:0005829 (0.2%)" "GO:0005524 (25.2%) GO:0004017 (24.8%) GO:0019205 (0.5%)" "AMP salvage (23.9%) nucleobase-containing compound metabolic process (0.3%) nucleoside monophosphate metabolic process (0.2%)" "cytoplasm (24.3%) cytosol (0.2%)" "ATP binding (25.2%) AMP kinase activity (24.8%) nucleobase-containing compound kinase activity (0.5%)" "IPR000850 (31.9%) IPR027417 (31.9%) IPR033690 (31.7%)" "Adenylate kinase/UMP-CMP kinase (31.9%) P-loop containing nucleoside triphosphate hydrolase (31.9%) Adenylate kinase, conserved site (31.7%)" MGAQTAEANINAGIAAAR Pseudomonadati Bacteria Pseudomonadati "1.1.1.290 (50%) 1.1.1.95 (40%) 1.1.1.81 (10%)" "4-phosphoerythronate dehydrogenase (50%) phosphoglycerate dehydrogenase (40%) hydroxypyruvate reductase (10%)" "GO:0051287 (48.1%) GO:0016616 (40.9%) GO:0016787 (3.9%)" "NAD binding (48.1%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (40.9%) hydrolase activity (3.9%)" "IPR006140 (32.2%) IPR036291 (32.2%) IPR006139 (31.9%)" "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (32.2%) NAD(P)-binding domain superfamily (32.2%) D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (31.9%)" QNTELGAVNVMTGIYTGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.2%) GO:0005829 (18.2%) "GO:0004612 (18.2%) GO:0005524 (18.2%) GO:0046872 (18.2%)" gluconeogenesis (18.2%) cytosol (18.2%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.2%) ATP binding (18.2%) metal ion binding (18.2%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" VKEAEMNAEADKQKK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae "GO:0005524 (33.3%) GO:0051082 (33.3%) GO:0140662 (33.3%)" "ATP binding (33.3%) unfolded protein binding (33.3%) ATP-dependent protein folding chaperone (33.3%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" SKSLEVIANSLAGFNHSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (19.8%) GO:0042274 (19.8%)" "GO:0015935 (19.8%) GO:0005840 (0.5%) GO:1990904 (0.2%)" "GO:0019843 (20%) GO:0003735 (19.8%) GO:0003723 (0.2%)" "translation (19.8%) ribosomal small subunit biogenesis (19.8%)" "small ribosomal subunit (19.8%) ribosome (0.5%) ribonucleoprotein complex (0.2%)" "rRNA binding (20%) structural constituent of ribosome (19.8%) RNA binding (0.2%)" "IPR002942 (16.8%) IPR036986 (16.8%) IPR001912 (16.6%)" "RNA-binding S4 domain (16.8%) RNA-binding S4 domain superfamily (16.8%) Small ribosomal subunit protein uS4, N-terminal (16.6%)" RDDLLLDKQTLDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.6.4.- (96.7%) 3.6.1.- (3.3%)" "Acting on ATP; involved in cellular and subcellular movement (96.7%) In phosphorus-containing anhydrides (3.3%)" GO:0006353 (14.6%) GO:0005829 (13.2%) "GO:0003723 (14.6%) GO:0005524 (14.6%) GO:0008186 (14.6%)" DNA-templated transcription termination (14.6%) cytosol (13.2%) "RNA binding (14.6%) ATP binding (14.6%) ATP-dependent activity, acting on RNA (14.6%)" "IPR000194 (10.5%) IPR004665 (10.5%) IPR027417 (10.5%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.5%) Transcription termination factor Rho (10.5%) P-loop containing nucleoside triphosphate hydrolase (10.5%)" IVNLAVTHVPSAFNSQSTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0034599 (33.3%) GO:0005737 (33.3%) GO:0016491 (33.3%) cellular response to oxidative stress (33.3%) cytoplasm (33.3%) oxidoreductase activity (33.3%) "IPR000415 (33.3%) IPR029479 (33.3%) IPR033877 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase Frm2/Hbn1-like (33.3%)" TIHSFDPCLACAVHLYDEEGKYVHQVDTF Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.12.99.6 (100%) hydrogenase (acceptor) (100%) GO:0030313 (32%) "GO:0008901 (32%) GO:0016151 (32%) GO:0033748 (4%)" cell envelope (32%) "ferredoxin hydrogenase activity (32%) nickel cation binding (32%) hydrogenase (acceptor) activity (4%)" "IPR001501 (25%) IPR018194 (25%) IPR029014 (25%)" "Nickel-dependent hydrogenase, large subunit (25%) Nickel-dependent hydrogenase, large subunit, nickel binding site (25%) [NiFe]-hydrogenase, large subunit (25%)" VINITEARPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003723 (100%) RNA binding (100%) "IPR000504 (20%) IPR012677 (20%) IPR035979 (20%)" "RNA recognition motif domain (20%) Nucleotide-binding alpha-beta plait domain superfamily (20%) RNA-binding domain superfamily (20%)" GIVPIYEPGLDELVAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.22 (100%) UDP-glucose 6-dehydrogenase (100%) "GO:0000271 (27.3%) GO:0006065 (18.2%)" "GO:0003979 (27.3%) GO:0051287 (27.3%)" "polysaccharide biosynthetic process (27.3%) UDP-glucuronate biosynthetic process (18.2%)" "UDP-glucose 6-dehydrogenase activity (27.3%) NAD binding (27.3%)" "IPR001732 (12.5%) IPR008927 (12.5%) IPR014026 (12.5%)" "UDP-glucose/GDP-mannose dehydrogenase, N-terminal (12.5%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (12.5%) UDP-glucose/GDP-mannose dehydrogenase, dimerisation (12.5%)" NAIAELEKLEYPTSTR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.1.1.15 (100%) glutamate decarboxylase (100%) GO:0006538 (24.6%) GO:0005829 (24.6%) "GO:0004351 (24.6%) GO:0030170 (24.6%) GO:0016829 (1.6%)" L-glutamate catabolic process (24.6%) cytosol (24.6%) "glutamate decarboxylase activity (24.6%) pyridoxal phosphate binding (24.6%) lyase activity (1.6%)" "IPR002129 (25%) IPR010107 (25%) IPR015421 (25%)" "Pyridoxal phosphate-dependent decarboxylase (25%) Glutamate decarboxylase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%)" VEGGGFTGQAGAIR Bacillati Bacteria Bacillati GO:0006412 (25%) GO:0022627 (25%) "GO:0003723 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "RNA binding (25%) structural constituent of ribosome (25%)" "IPR000754 (20%) IPR014721 (20%) IPR020568 (20%)" "Small ribosomal subunit protein uS9 (20%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (20%) Ribosomal protein uS5 domain 2-type superfamily (20%)" GAFAIYDSEREK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0009263 (19.5%) GO:0071897 (19.5%)" "GO:0004748 (20.4%) GO:0031419 (20.4%) GO:0005524 (19.5%)" "deoxyribonucleotide biosynthetic process (19.5%) DNA biosynthetic process (19.5%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.4%) cobalamin binding (20.4%) ATP binding (19.5%)" "IPR000788 (25.3%) IPR013344 (25.3%) IPR050862 (25.3%)" "Ribonucleotide reductase large subunit, C-terminal (25.3%) Ribonucleotide reductase, adenosylcobalamin-dependent (25.3%) Ribonucleoside diphosphate reductase class-2 (25.3%)" VIDTGMGFER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) "GO:0005737 (14.3%) GO:0016020 (0%)" "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) "cytoplasm (14.3%) membrane (0%)" "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR018164 (9.2%) IPR050058 (9.2%) IPR002318 (9.2%)" "Alanyl-tRNA synthetase, class IIc, N-terminal (9.2%) Alanine--tRNA ligase (9.2%) Alanine-tRNA ligase, class IIc (9.2%)" KAHLILPTHR root 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (16.1%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (16.1%)" "IPR001114 (14.4%) IPR027417 (14.4%) IPR033128 (14.3%)" "Adenylosuccinate synthetase (14.4%) P-loop containing nucleoside triphosphate hydrolase (14.4%) Adenylosuccinate synthase, active site (14.3%)" QLNVTQLDVFSR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.4.21.92 (100%) endopeptidase Clp (100%) "GO:0006515 (16.4%) GO:0006508 (0.4%)" "GO:0005737 (16.4%) GO:0009368 (16.4%) GO:0016020 (0.6%)" "GO:0004252 (16.8%) GO:0004176 (16.4%) GO:0051117 (16.4%)" "protein quality control for misfolded or incompletely synthesized proteins (16.4%) proteolysis (0.4%)" "cytoplasm (16.4%) endopeptidase Clp complex (16.4%) membrane (0.6%)" "serine-type endopeptidase activity (16.8%) ATP-dependent peptidase activity (16.4%) ATPase binding (16.4%)" "IPR023562 (30.1%) IPR029045 (30.1%) IPR001907 (29.9%)" "Clp protease proteolytic subunit /Translocation-enhancing protein TepA (30.1%) ClpP/crotonase-like domain superfamily (30.1%) ATP-dependent Clp protease proteolytic subunit (29.9%)" DITLAMDCAASEFYKDGK root "4.2.1.11 (99.9%) 6.3.4.2 (0.1%)" "phosphopyruvate hydratase (99.9%) CTP synthase (glutamine hydrolyzing) (0.1%)" "GO:0006096 (16.7%) GO:0006396 (0%) GO:0006401 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (15.9%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" "glycolytic process (16.7%) RNA processing (0%) RNA catabolic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (15.9%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020810 (16.8%) IPR036849 (16.8%)" "Enolase (16.8%) Enolase, C-terminal TIM barrel domain (16.8%) Enolase-like, C-terminal domain superfamily (16.8%)" VDINAAGTTNAGGASNNNQR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (9.1%) IPR000795 (9.1%) IPR005225 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translational (tr)-type GTP-binding domain (9.1%) Small GTP-binding domain (9.1%)" IGNDCVKVDPAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" DMLTVLSAGMTAEEIILNGISK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (27.8%) GO:0003863 (5.6%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (27.8%) branched-chain 2-oxo acid dehydrogenase activity (5.6%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" YGVGDDAAVLSYPADK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.4.16 (100%) thiamine-phosphate kinase (100%) "GO:0009228 (20.4%) GO:0009229 (19.4%)" "GO:0009030 (20.4%) GO:0000287 (19.4%) GO:0005524 (19.4%)" "thiamine biosynthetic process (20.4%) thiamine diphosphate biosynthetic process (19.4%)" "thiamine-phosphate kinase activity (20.4%) magnesium ion binding (19.4%) ATP binding (19.4%)" "IPR006283 (25%) IPR016188 (25%) IPR036676 (25%)" "Thiamine-monophosphate kinase-like (25%) PurM-like, N-terminal domain (25%) PurM-like, C-terminal domain superfamily (25%)" IVGFELSPVLWKK Pseudomonadati Bacteria Pseudomonadati "5.6.2.1 (99.8%) 5.99.1.2 (0.2%)" "DNA topoisomerase (99.8%) Transferred entry: 5.6.2.1 (0.2%)" GO:0006265 (25%) "GO:0003677 (25%) GO:0003917 (25%) GO:0046872 (24.9%)" DNA topological change (25%) "DNA binding (25%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25%) metal ion binding (24.9%)" "IPR000380 (7.2%) IPR003601 (7.2%) IPR003602 (7.2%)" "DNA topoisomerase, type IA (7.2%) DNA topoisomerase, type IA, domain 2 (7.2%) DNA topoisomerase, type IA, DNA-binding domain (7.2%)" VKSTNDLELKDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (16.9%) GO:0042254 (16.3%)" "GO:0015935 (16.9%) GO:0005737 (16.3%)" "GO:0003735 (16.9%) GO:0019843 (16.9%)" "translation (16.9%) ribosome biogenesis (16.3%)" "small ribosomal subunit (16.9%) cytoplasm (16.3%)" "structural constituent of ribosome (16.9%) rRNA binding (16.9%)" "IPR000851 (14.3%) IPR005324 (14.3%) IPR005712 (14.3%)" "Small ribosomal subunit protein uS5 (14.3%) Small ribosomal subunit protein uS5, C-terminal (14.3%) Small ribosomal subunit protein uS5, bacteria (14.3%)" VVVIPTDEELLIASDTMAILDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" QILLARPIVALANKDLGFLPGDEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" AAVKELNPDVNSLGSRG Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola DSAQEAGHHVVDK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006777 (33.2%) GO:0034214 (0.4%)" GO:0005829 (33.2%) "GO:0005525 (31.7%) GO:0016779 (0.7%) GO:0016829 (0.4%)" "Mo-molybdopterin cofactor biosynthetic process (33.2%) protein hexamerization (0.4%)" cytosol (33.2%) "GTP binding (31.7%) nucleotidyltransferase activity (0.7%) lyase activity (0.4%)" "IPR012245 (20.4%) IPR036425 (20.2%) IPR001453 (20%)" "Molybdenum cofactor biosynthesis protein MoaB (20.4%) MoaB/Mog-like domain superfamily (20.2%) MoaB/Mog domain (20%)" AREPFDVEGTENECKAWIESK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004818 (16.7%) GO:0005524 (16.7%)" glutamyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR000924 (10%) IPR001412 (10%) IPR004527 (10%)" "Glutamyl/glutaminyl-tRNA synthetase (10%) Aminoacyl-tRNA synthetase, class I, conserved site (10%) Glutamate-tRNA ligase, bacterial/mitochondrial (10%)" AASATVLGVLATHVENMIVASADLSNSDKTDGFLKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" ASNQGEPVILDINADAGK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0051782 (16.4%) GO:0000917 (15.8%) GO:0000918 (0.2%)" "GO:0005829 (16.6%) GO:0009898 (16.6%) GO:0005886 (0.2%)" "GO:0005524 (16.6%) GO:0016887 (16.6%) GO:0042802 (0.2%)" "negative regulation of cell division (16.4%) division septum assembly (15.8%) division septum site selection (0.2%)" "cytosol (16.6%) cytoplasmic side of plasma membrane (16.6%) plasma membrane (0.2%)" "ATP binding (16.6%) ATP hydrolysis activity (16.6%) identical protein binding (0.2%)" "IPR027417 (20.4%) IPR050625 (20.4%) IPR010223 (19.8%)" "P-loop containing nucleoside triphosphate hydrolase (20.4%) ParA/MinD ATPase (20.4%) ATP binding protein MinD (19.8%)" RLGLIAINTALEADIFGNINSTHVSGTR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" LREIYSDLSVMNAFGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0000917 (14.3%) GO:0043093 (14.3%) GO:0051258 (14.3%)" "GO:0005737 (14.3%) GO:0032153 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%)" "division septum assembly (14.3%) FtsZ-dependent cytokinesis (14.3%) protein polymerization (14.3%)" "cytoplasm (14.3%) cell division site (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" RAEITPANADTVTR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.3.1.117 (100%) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (100%) "GO:0009089 (19.7%) GO:0019877 (19.7%) GO:0009085 (0.1%)" "GO:0005737 (19.3%) GO:0005829 (0.1%)" "GO:0008666 (21%) GO:0016779 (19.4%) GO:0016746 (0.6%)" "lysine biosynthetic process via diaminopimelate (19.7%) diaminopimelate biosynthetic process (19.7%) lysine biosynthetic process (0.1%)" "cytoplasm (19.3%) cytosol (0.1%)" "2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity (21%) nucleotidyltransferase activity (19.4%) acyltransferase activity (0.6%)" "IPR037133 (17.3%) IPR023180 (17.2%) IPR011004 (17%)" "Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily (17.3%) Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 (17.2%) Trimeric LpxA-like superfamily (17%)" GLMLNVTDPASIESVLEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) "GO:0030497 (31.3%) GO:0006629 (0.3%) GO:0006633 (0.3%)" GO:0005829 (0.3%) "GO:0004316 (32.7%) GO:0051287 (31%) GO:0016491 (1%)" "fatty acid elongation (31.3%) lipid metabolic process (0.3%) fatty acid biosynthetic process (0.3%)" cytosol (0.3%) "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (32.7%) NAD binding (31%) oxidoreductase activity (1%)" "IPR002347 (17.3%) IPR036291 (17.3%) IPR050259 (16.8%)" "Short-chain dehydrogenase/reductase SDR (17.3%) NAD(P)-binding domain superfamily (17.3%) Short-chain dehydrogenases/reductases (16.8%)" KGMNVTMEEANAYVQSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" LAAQKLPITTK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20.1%) "GO:0022625 (20.1%) GO:0005840 (0.3%)" "GO:0003735 (20.1%) GO:0019843 (20.1%) GO:0000049 (19.3%)" translation (20.1%) "cytosolic large ribosomal subunit (20.1%) ribosome (0.3%)" "structural constituent of ribosome (20.1%) rRNA binding (20.1%) tRNA binding (19.3%)" "IPR000114 (20.1%) IPR016180 (20.1%) IPR036920 (20.1%)" "Large ribosomal subunit protein uL16, bacteria (20.1%) Large ribosomal subunit protein uL16 domain (20.1%) Large ribosomal subunit protein uL16 superfamily (20.1%)" WLQWYQDPSKPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50%) GO:0046872 (50%)" "alkaline phosphatase activity (50%) metal ion binding (50%)" "IPR001952 (50%) IPR017850 (50%)" "Alkaline phosphatase (50%) Alkaline-phosphatase-like, core domain superfamily (50%)" VTAERDPANLKWDEVGVDVVAEATGLFLTDETAR root "1.2.1.- (88.4%) 1.2.1.12 (11.6%)" "With NAD(+) or NADP(+) as acceptor (88.4%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (11.6%)" "GO:0072524 (19.8%) GO:0006006 (18.2%) GO:0006096 (0.7%)" "GO:0005737 (0.6%) GO:0005576 (0%) GO:0005829 (0%)" "GO:0051287 (21%) GO:0050661 (18.2%) GO:0004365 (16.4%)" "pyridine-containing compound metabolic process (19.8%) glucose metabolic process (18.2%) glycolytic process (0.7%)" "cytoplasm (0.6%) extracellular region (0%) cytosol (0%)" "NAD binding (21%) NADP binding (18.2%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (16.4%)" "IPR020828 (17.2%) IPR020831 (17.2%) IPR036291 (17.2%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17.2%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.2%) NAD(P)-binding domain superfamily (17.2%)" TKADIIVLCGVHFMGETAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.5.1.72 (100%) quinolinate synthase (100%) GO:0034628 (20%) GO:0005829 (20%) "GO:0008987 (20%) GO:0046872 (20%) GO:0051539 (20%)" 'de novo' NAD+ biosynthetic process from L-aspartate (20%) cytosol (20%) "quinolinate synthetase A activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR003473 (33.3%) IPR023066 (33.3%) IPR036094 (33.3%)" "Quinolinate synthetase A (33.3%) Quinolinate synthase A, type 2 (33.3%) Quinolinate synthetase A superfamily (33.3%)" ILDPHIVGQEHYDVAQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "7.1.2.2 (96.2%) 3.6.3.14 (3.8%)" "H(+)-transporting two-sector ATPase (96.2%) Transferred entry: 7.1.2.2 (3.8%)" "GO:0045259 (21.8%) GO:0005886 (21%)" "GO:0005524 (21.8%) GO:0046933 (21.8%) GO:0016787 (10.9%)" "proton-transporting ATP synthase complex (21.8%) plasma membrane (21%)" "ATP binding (21.8%) proton-transporting ATP synthase activity, rotational mechanism (21.8%) hydrolase activity (10.9%)" "IPR000194 (10%) IPR003593 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" VAVDGIRKEIEAAGYELVLLEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.95 (66.7%) 1.1.1.81 (22.2%) 1.1.1.290 (11.1%)" "phosphoglycerate dehydrogenase (66.7%) hydroxypyruvate reductase (22.2%) 4-phosphoerythronate dehydrogenase (11.1%)" "GO:0051287 (49.4%) GO:0016616 (39.1%) GO:0004617 (8%)" "NAD binding (49.4%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (39.1%) phosphoglycerate dehydrogenase activity (8%)" "IPR006139 (34.1%) IPR036291 (33.3%) IPR006140 (32.6%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (34.1%) NAD(P)-binding domain superfamily (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (32.6%)" HVDEVNKMAELGTQLAHVDGGVPNIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" AEVTDIANAIYYR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.1.40 (100%) pyruvate kinase (100%) "GO:0006950 (11.5%) GO:0006096 (0.1%)" "GO:0005737 (0.1%) GO:0005829 (0.1%)" "GO:0016301 (17.7%) GO:0000287 (17.7%) GO:0004743 (17.7%)" "response to stress (11.5%) glycolytic process (0.1%)" "cytoplasm (0.1%) cytosol (0.1%)" "kinase activity (17.7%) magnesium ion binding (17.7%) pyruvate kinase activity (17.7%)" "IPR001697 (11.2%) IPR015793 (11.2%) IPR015795 (11.2%)" "Pyruvate kinase (11.2%) Pyruvate kinase, barrel (11.2%) Pyruvate kinase, C-terminal (11.2%)" WMDWANQTLSNAHR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.5.1.18 (100%) glutathione transferase (100%) "GO:0005737 (0.8%) GO:0005829 (0.8%)" "GO:0016740 (71.2%) GO:0004364 (23.7%) GO:0016853 (0.8%)" "cytoplasm (0.8%) cytosol (0.8%)" "transferase activity (71.2%) glutathione transferase activity (23.7%) isomerase activity (0.8%)" "IPR010987 (19.5%) IPR036282 (19.5%) IPR004045 (19.3%)" "Glutathione S-transferase, C-terminal-like (19.5%) Glutathione S-transferase, C-terminal domain superfamily (19.5%) Glutathione S-transferase, N-terminal (19.3%)" FGEAFDEAQFR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.6%) GO:0015966 (12.1%) GO:0044281 (0.6%)" "GO:0005737 (12.6%) GO:0070062 (12.1%) GO:1990742 (12.1%)" "GO:0004820 (12.6%) GO:0005524 (12.6%) GO:0004081 (12.1%)" "glycyl-tRNA aminoacylation (12.6%) diadenosine tetraphosphate biosynthetic process (12.1%) small molecule metabolic process (0.6%)" "cytoplasm (12.6%) extracellular exosome (12.1%) microvesicle (12.1%)" "glycine-tRNA ligase activity (12.6%) ATP binding (12.6%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.1%)" "IPR002314 (11.1%) IPR002315 (11.1%) IPR004154 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Glycyl-tRNA synthetase (11.1%) Anticodon-binding (11.1%)" CIPLAGDKTPGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.1%) IPR004154 (11.1%) IPR004499 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Anticodon-binding (11.1%) Proline-tRNA ligase, class IIa, archaeal-type (11.1%)" VTVTCSCGNTFETR Bacteria Bacteria GO:0006412 (16.7%) "GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16.7%) GO:0046872 (16.7%)" translation (16.7%) "ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%) metal ion binding (16.7%)" "IPR002150 (25%) IPR027491 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL31 type A/B (25%) Large ribosomal subunit protein bL31 type A (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" AIASHAVMSDPASTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.2%) GO:0006164 (11.2%) GO:0009156 (10.7%)" "GO:0002189 (11.2%) GO:0005737 (11.2%)" "GO:0000287 (11.2%) GO:0004749 (11.2%) GO:0016301 (11.2%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.2%) purine nucleotide biosynthetic process (11.2%) ribonucleoside monophosphate biosynthetic process (10.7%)" "ribose phosphate diphosphokinase complex (11.2%) cytoplasm (11.2%)" "magnesium ion binding (11.2%) ribose phosphate diphosphokinase activity (11.2%) kinase activity (11.2%)" "IPR000836 (20.2%) IPR005946 (20.2%) IPR029057 (20.2%)" "Phosphoribosyltransferase domain (20.2%) Ribose-phosphate pyrophosphokinase (20.2%) Phosphoribosyltransferase-like (20.2%)" YGFVTDIDTEVIHR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR010231 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufB (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" AIAEATDLPVVLYNVPGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.3.7 (100%) 4-hydroxy-tetrahydrodipicolinate synthase (100%) "GO:0009089 (20.2%) GO:0019877 (20.2%) GO:0044281 (0.9%)" "GO:0005829 (21.1%) GO:0016020 (16.7%)" GO:0008840 (21.1%) "lysine biosynthetic process via diaminopimelate (20.2%) diaminopimelate biosynthetic process (20.2%) small molecule metabolic process (0.9%)" "cytosol (21.1%) membrane (16.7%)" 4-hydroxy-tetrahydrodipicolinate synthase activity (21.1%) "IPR002220 (25.3%) IPR013785 (25.3%) IPR020625 (25.3%)" "DapA-like (25.3%) Aldolase-type TIM barrel (25.3%) Schiff base-forming aldolase, active site (25.3%)" YIELFENITGEK Pseudomonadati Bacteria Pseudomonadati 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25.1%) GO:0005737 (24.7%) "GO:0004639 (25.1%) GO:0005524 (25.1%)" 'de novo' IMP biosynthetic process (25.1%) cytoplasm (24.7%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25.1%) ATP binding (25.1%)" "IPR028923 (50.4%) IPR018236 (49.6%)" "SAICAR synthetase/ADE2, N-terminal (50.4%) SAICAR synthetase, conserved site (49.6%)" ILMLGGTPANK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.16.-.- (93.3%) 1.16.3.1 (6.7%)" "Oxidizing metal ions (93.3%) ferroxidase (6.7%)" "GO:0008199 (42.5%) GO:0016722 (41.5%) GO:0003677 (15.1%)" "ferric iron binding (42.5%) oxidoreductase activity, acting on metal ions (41.5%) DNA binding (15.1%)" "IPR002177 (20%) IPR008331 (20%) IPR009078 (20%)" "DNA-binding protein Dps (20%) Ferritin/DPS domain (20%) Ferritin-like superfamily (20%)" KDGFTLAQEIR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (17.8%) IPR039420 (17.8%) IPR001867 (17.7%)" "Signal transduction response regulator, receiver domain (17.8%) Transcriptional regulatory protein WalR-like (17.8%) OmpR/PhoB-type DNA-binding domain (17.7%)" SLVIHPATTTHSQLSARELEEQGIKPGTVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.4.1.11 (100%) methionine gamma-lyase (100%) "GO:0006535 (14%) GO:0019346 (14%) GO:0071269 (14%)" GO:0005737 (14%) "GO:0003961 (14%) GO:0004124 (14%) GO:0030170 (14%)" "cysteine biosynthetic process from serine (14%) transsulfuration (14%) L-homocysteine biosynthetic process (14%)" cytoplasm (14%) "O-acetylhomoserine aminocarboxypropyltransferase activity (14%) cysteine synthase activity (14%) pyridoxal phosphate binding (14%)" "IPR000277 (16.7%) IPR006235 (16.7%) IPR015421 (16.7%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (16.7%) O-acetylhomoserine/O-acetylserine sulfhydrylase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" VGGSTYQVPVEVRPVRR root "GO:0006412 (19.9%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0015935 (19.8%) GO:0005840 (0.3%) GO:0022627 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.9%) GO:0000049 (19.7%)" "translation (19.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "small ribosomal subunit (19.8%) ribosome (0.3%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%) tRNA binding (19.7%)" "IPR005717 (20.1%) IPR023798 (20.1%) IPR036823 (20.1%)" "Small ribosomal subunit protein uS7, bacteria/organella (20.1%) Small ribosomal subunit protein uS7 domain (20.1%) Small ribosomal subunit protein uS7 domain superfamily (20.1%)" SVLDKAGVDRDIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (16.7%) "GO:0005829 (16.7%) GO:0015935 (16.7%)" "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "cytosol (16.7%) small ribosomal subunit (16.7%)" "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR001892 (20%) IPR010979 (20%) IPR018269 (20%)" "Small ribosomal subunit protein uS13 (20%) Small ribosomal subunit protein uS13-like, H2TH (20%) Small ribosomal subunit protein uS13, conserved site (20%)" AAIVGYGNIGK Bacteria Bacteria 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0000166 (25%) GO:0047850 (25%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "nucleotide binding (25%) diaminopimelate dehydrogenase activity (25%)" "IPR036291 (27%) IPR010190 (26.6%) IPR032094 (26.6%)" "NAD(P)-binding domain superfamily (27%) Diaminopimelate dehydrogenase, Ddh (26.6%) Meso-diaminopimelate D-dehydrogenase, C-terminal (26.6%)" CAYVCPHASIRPFVLDAEEQKGADFETLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.1 (60%) 1.2.1.51 (20%) 1.2.7.- (20%)" "pyruvate synthase (60%) pyruvate dehydrogenase (NADP(+)) (20%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (8%)" "GO:0005506 (14.7%) GO:0030976 (14.7%) GO:0051539 (14.7%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (8%)" "iron ion binding (14.7%) thiamine pyrophosphate binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" DTHQAMEGFIHNLNTMHSR Bacteria Bacteria "1.17.4.2 (98.3%) 1.1.98.6 (1.7%)" "ribonucleoside-triphosphate reductase (thioredoxin) (98.3%) ribonucleoside-triphosphate reductase (formate) (1.7%)" "GO:0006260 (16.7%) GO:0009265 (16.7%)" GO:0031250 (16.7%) "GO:0008998 (16.7%) GO:0004748 (16.6%) GO:0005524 (16.3%)" "DNA replication (16.7%) 2'-deoxyribonucleotide biosynthetic process (16.7%)" anaerobic ribonucleoside-triphosphate reductase complex (16.7%) "ribonucleoside-triphosphate reductase (thioredoxin) activity (16.7%) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.6%) ATP binding (16.3%)" "IPR012833 (50.7%) IPR005144 (49.3%)" "Ribonucleoside-triphosphate reductase, anaerobic (50.7%) ATP-cone domain (49.3%)" MQDWEDLKVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (34%) "GO:0016615 (32.1%) GO:0016616 (32.1%) GO:0030060 (1.9%)" malate metabolic process (34%) "malate dehydrogenase activity (32.1%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (32.1%) L-malate dehydrogenase (NAD+) activity (1.9%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" GMEELTSDIPNVSEEATKDLDER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (17.8%) GO:0006508 (5.5%)" GO:0000428 (17.8%) "GO:0003677 (17.8%) GO:0003899 (17.8%) GO:0032549 (17.8%)" "DNA-templated transcription (17.8%) proteolysis (5.5%)" DNA-directed RNA polymerase complex (17.8%) "DNA binding (17.8%) DNA-directed RNA polymerase activity (17.8%) ribonucleoside binding (17.8%)" "IPR007120 (7.6%) IPR007121 (7.6%) IPR007641 (7.6%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.6%) RNA polymerase, beta subunit, conserved site (7.6%) RNA polymerase Rpb2, domain 7 (7.6%)" ILYDRNEDEEFVSFEPALK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.9%) IPR007121 (7.9%) IPR007645 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) RNA polymerase, beta subunit, conserved site (7.9%) RNA polymerase Rpb2, domain 3 (7.9%)" ETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0015891 (23.5%) GO:0006879 (0.2%) GO:0033214 (0.2%)" "GO:0009279 (26.2%) GO:0016020 (0.2%) GO:1902495 (0.2%)" "GO:0015344 (26.1%) GO:0038023 (23.3%)" "siderophore transport (23.5%) intracellular iron ion homeostasis (0.2%) siderophore-iron import into cell (0.2%)" "cell outer membrane (26.2%) membrane (0.2%) transmembrane transporter complex (0.2%)" "siderophore uptake transmembrane transporter activity (26.1%) signaling receptor activity (23.3%)" "IPR036942 (15.4%) IPR039426 (15.3%) IPR000531 (15.1%)" "TonB-dependent receptor-like, beta-barrel domain superfamily (15.4%) TonB-dependent receptor-like (15.3%) TonB-dependent receptor-like, beta-barrel (15.1%)" VKEGDDLMNADRGSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" VTSQCDPTAHAEVSAIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.4.3 (100%) guanine deaminase (100%) GO:0006152 (32.1%) "GO:0008270 (32.1%) GO:0047974 (32.1%) GO:0008892 (3.8%)" purine nucleoside catabolic process (32.1%) "zinc ion binding (32.1%) guanosine deaminase activity (32.1%) guanine deaminase activity (3.8%)" "IPR002125 (33.3%) IPR016192 (33.3%) IPR016193 (33.3%)" "Cytidine and deoxycytidylate deaminase domain (33.3%) APOBEC/CMP deaminase, zinc-binding (33.3%) Cytidine deaminase-like (33.3%)" AAEVPIIVAINKIDKPTANPDK root GO:0005829 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytosol (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (9.1%) IPR000795 (9.1%) IPR005225 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translational (tr)-type GTP-binding domain (9.1%) Small GTP-binding domain (9.1%)" IRDIGHEYGAVTGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (16.6%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (16.6%)" "IPR001114 (14.3%) IPR027417 (14.3%) IPR033128 (14.3%)" "Adenylosuccinate synthetase (14.3%) P-loop containing nucleoside triphosphate hydrolase (14.3%) Adenylosuccinate synthase, active site (14.3%)" VIASCGCTTPEWPKEPVAPGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011467 (50%) IPR013783 (50%)" "Protein of unknown function DUF1573 (50%) Immunoglobulin-like fold (50%)" YATAAGMVGIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" RVGGATFQVPTEIRPDRK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0006412 (20.5%) GO:0000028 (0.1%)" "GO:0015935 (20.3%) GO:0005840 (0.1%) GO:0022627 (0.1%)" "GO:0003735 (20.5%) GO:0019843 (20.5%) GO:0000049 (17.7%)" "translation (20.5%) ribosomal small subunit assembly (0.1%)" "small ribosomal subunit (20.3%) ribosome (0.1%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (20.5%) rRNA binding (20.5%) tRNA binding (17.7%)" "IPR000235 (24.8%) IPR005717 (24.8%) IPR023798 (24.8%)" "Small ribosomal subunit protein uS7 (24.8%) Small ribosomal subunit protein uS7, bacteria/organella (24.8%) Small ribosomal subunit protein uS7 domain (24.8%)" GNQTSGELILDNNDLERER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0000027 (9.7%) GO:0009409 (9.7%) GO:0010467 (7.8%)" "GO:0005829 (10.4%) GO:1990904 (10.4%)" "GO:0003924 (10.4%) GO:0005525 (10.4%) GO:0000049 (9.7%)" "ribosomal large subunit assembly (9.7%) response to cold (9.7%) gene expression (7.8%)" "cytosol (10.4%) ribonucleoprotein complex (10.4%)" "GTPase activity (10.4%) GTP binding (10.4%) tRNA binding (9.7%)" "IPR000795 (6.8%) IPR004161 (6.8%) IPR005225 (6.8%)" "Translational (tr)-type GTP-binding domain (6.8%) Translation elongation factor EFTu-like, domain 2 (6.8%) Small GTP-binding domain (6.8%)" QTIWGGDKIIPFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) "GO:0005975 (32.7%) GO:0009298 (0.3%)" "GO:0004476 (33.3%) GO:0008270 (33.3%) GO:0016853 (0.3%)" "carbohydrate metabolic process (32.7%) GDP-mannose biosynthetic process (0.3%)" "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%) isomerase activity (0.3%)" "IPR011051 (16.8%) IPR014710 (16.8%) IPR046457 (16.8%)" "RmlC-like cupin domain superfamily (16.8%) RmlC-like jelly roll fold (16.8%) Phosphomannose isomerase type I, catalytic domain (16.8%)" FTVLISPHVNK root "GO:0006412 (19.9%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0005840 (20.1%) GO:1990904 (19.8%) GO:0015935 (0.1%)" "GO:0003735 (19.9%) GO:0000049 (19.6%) GO:0003723 (0.2%)" "translation (19.9%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (20.1%) ribonucleoprotein complex (19.8%) small ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) tRNA binding (19.6%) RNA binding (0.2%)" "IPR001848 (25.1%) IPR027486 (25.1%) IPR036838 (25.1%)" "Small ribosomal subunit protein uS10 (25.1%) Small ribosomal subunit protein uS10 domain (25.1%) Small ribosomal subunit protein uS10 domain superfamily (25.1%)" DKAADAAIEFAVVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) IQAVPTFILFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0045454 (32.7%) "GO:0005829 (32.7%) GO:0005737 (1.3%)" GO:0015035 (33.3%) cell redox homeostasis (32.7%) "cytosol (32.7%) cytoplasm (1.3%)" protein-disulfide reductase activity (33.3%) "IPR013766 (25.2%) IPR036249 (25.2%) IPR005746 (24.8%)" "Thioredoxin domain (25.2%) Thioredoxin-like superfamily (25.2%) Thioredoxin (24.8%)" MQDSNHIINEVTSGDYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR010231 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufB (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" LAIEGGCNAVASTFGNLGAVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (48.9%) "GO:0004332 (48.9%) GO:0016829 (2.2%)" glycolytic process (48.9%) "fructose-bisphosphate aldolase activity (48.9%) lyase activity (2.2%)" "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" IFSFTALTVVGDGNGR root "GO:0006412 (16.9%) GO:0042254 (15.9%) GO:0002181 (0%)" "GO:0015935 (16.7%) GO:0005737 (15.9%) GO:0005840 (0.4%)" "GO:0003735 (16.9%) GO:0019843 (16.9%) GO:0003723 (0%)" "translation (16.9%) ribosome biogenesis (15.9%) cytoplasmic translation (0%)" "small ribosomal subunit (16.7%) cytoplasm (15.9%) ribosome (0.4%)" "structural constituent of ribosome (16.9%) rRNA binding (16.9%) RNA binding (0%)" "IPR013810 (14.4%) IPR018192 (14.3%) IPR000851 (14.3%)" "Small ribosomal subunit protein uS5, N-terminal (14.4%) Small ribosomal subunit protein uS5, N-terminal, conserved site (14.3%) Small ribosomal subunit protein uS5 (14.3%)" SAQDFMKVGDEIEAVILTLDRDER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (23.9%) "GO:0022627 (22%) GO:0005737 (1.8%) GO:0005840 (1.8%)" "GO:0003729 (23.9%) GO:0003735 (23.9%) GO:0004654 (0.9%)" translation (23.9%) "cytosolic small ribosomal subunit (22%) cytoplasm (1.8%) ribosome (1.8%)" "mRNA binding (23.9%) structural constituent of ribosome (23.9%) polyribonucleotide nucleotidyltransferase activity (0.9%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" VVANPYMFTTNTSSNSAYTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) AADVETLGDLVQFNKTDLLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) "GO:0000428 (17%) GO:0005737 (16%)" "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0046983 (16.4%)" DNA-templated transcription (16.8%) "DNA-directed RNA polymerase complex (17%) cytoplasm (16%)" "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) protein dimerization activity (16.4%)" "IPR011260 (17.3%) IPR011263 (16.8%) IPR036603 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (17.3%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) RNA polymerase, RBP11-like subunit (16.7%)" AEAPKDDFDYYQAQASANWNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.7%) GO:0006516 (19.7%)" GO:0005829 (19.7%) "GO:0000224 (19.7%) GO:0030246 (19.7%) GO:0016798 (1.6%)" "carbohydrate metabolic process (19.7%) glycoprotein catabolic process (19.7%)" cytosol (19.7%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.7%) carbohydrate binding (19.7%) hydrolase activity, acting on glycosyl bonds (1.6%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" WVDDKGEIQVNLGYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.4.1.4 (66.7%) 1.4.1.2 (33.3%)" "glutamate dehydrogenase (NADP(+)) (66.7%) glutamate dehydrogenase (33.3%)" GO:0006537 (25.5%) "GO:0005829 (24.5%) GO:0009986 (0.9%)" "GO:0004354 (25.5%) GO:0000166 (22.7%) GO:0004352 (0.9%)" glutamate biosynthetic process (25.5%) "cytosol (24.5%) cell surface (0.9%)" "glutamate dehydrogenase (NADP+) activity (25.5%) nucleotide binding (22.7%) glutamate dehydrogenase (NAD+) activity (0.9%)" "IPR006097 (12.8%) IPR046346 (12.8%) IPR050724 (12.8%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.8%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (12.8%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (12.8%)" SVASYECVAGNPAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016740 (100%) transferase activity (100%) "IPR001451 (20%) IPR011004 (20%) IPR020019 (20%)" "Hexapeptide repeat (20%) Trimeric LpxA-like superfamily (20%) Acyltransferase PglD-like (20%)" QASVQAIKEKDSEAARAEAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" WYNSSSPVFSTDGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.21.- (100%) Serine endopeptidases (100%) GO:0006508 (33.3%) GO:0005737 (33.3%) GO:0008236 (33.3%) proteolysis (33.3%) cytoplasm (33.3%) serine-type peptidase activity (33.3%) "IPR005151 (12.4%) IPR011659 (12.4%) IPR012393 (12.4%)" "Tail specific protease (12.4%) WD40-like beta-propeller (12.4%) Tricorn protease (12.4%)" DIADAVTAAGVEVAK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (19.8%) GO:0002181 (0.1%) GO:0032259 (0.1%)" "GO:0005840 (20.1%) GO:1990904 (19.7%) GO:0022625 (0.2%)" "GO:0003735 (19.9%) GO:0019843 (19.7%) GO:0008168 (0.1%)" "translation (19.8%) cytoplasmic translation (0.1%) methylation (0.1%)" "ribosome (20.1%) ribonucleoprotein complex (19.7%) cytosolic large ribosomal subunit (0.2%)" "structural constituent of ribosome (19.9%) rRNA binding (19.7%) methyltransferase activity (0.1%)" "IPR020069 (14.4%) IPR020594 (14.4%) IPR036791 (14.4%)" "Large ribosomal subunit protein bL9, C-terminal (14.4%) Large ribosomal subunit protein bL9, bacteria/chloroplast (14.4%) Large ribosomal subunit protein bL9, C-terminal domain superfamily (14.4%)" GNDFLGWLHLPSSISK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20.2%) IPR018189 (20.2%) IPR035476 (20.2%)" "Phosphoglucose isomerase (PGI) (20.2%) Phosphoglucose isomerase, conserved site (20.2%) Phosphoglucose isomerase, SIS domain 1 (20.2%)" TRIESGNLQELIKDKNVVGVTTNPSIFQK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (25%)" GO:0005737 (25%) GO:0004801 (25%) "carbohydrate metabolic process (25%) pentose-phosphate shunt (25%)" cytoplasm (25%) transaldolase activity (25%) "IPR001585 (25%) IPR004732 (25%) IPR013785 (25%)" "Transaldolase/Fructose-6-phosphate aldolase (25%) Transaldolase type 2 (25%) Aldolase-type TIM barrel (25%)" VLVLCTPDAEAAAKEAGADYVGLDEYIEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (16.9%) GO:0006417 (16.1%)" "GO:0015934 (16.9%) GO:0005840 (0.3%) GO:1990904 (0.2%)" "GO:0003735 (16.9%) GO:0019843 (16.9%) GO:0000049 (16.1%)" "translation (16.9%) regulation of translation (16.1%)" "large ribosomal subunit (16.9%) ribosome (0.3%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (16.9%) rRNA binding (16.9%) tRNA binding (16.1%)" "IPR016095 (16.8%) IPR023673 (16.8%) IPR023674 (16.8%)" "Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.8%) Large ribosomal subunit protein uL1, conserved site (16.8%) Ribosomal protein uL1-like (16.8%)" SCIDSGFSSVMIDGSHLPYDENVALTKK Pseudomonadati Bacteria Pseudomonadati 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (25%) GO:0030388 (25%)" "GO:0004332 (25%) GO:0008270 (25%)" "glycolytic process (25%) fructose 1,6-bisphosphate metabolic process (25%)" "fructose-bisphosphate aldolase activity (25%) zinc ion binding (25%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" MKVYQTNEIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25%) "GO:0003746 (25.1%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25.1%) GTPase activity (25%) GTP binding (25%)" "IPR027417 (7.8%) IPR000795 (7.8%) IPR005225 (7.7%)" "P-loop containing nucleoside triphosphate hydrolase (7.8%) Translational (tr)-type GTP-binding domain (7.8%) Small GTP-binding domain (7.7%)" FRNDEAFLQQVMK root "6.1.1.2 (99.2%) 3.1.3.18 (0.8%)" "tryptophan--tRNA ligase (99.2%) phosphoglycolate phosphatase (0.8%)" "GO:0006436 (24.6%) GO:0005975 (0.2%) GO:0046295 (0.2%)" "GO:0005829 (24.6%) GO:0005739 (0.4%)" "GO:0004830 (24.8%) GO:0005524 (23%) GO:0016874 (1.5%)" "tryptophanyl-tRNA aminoacylation (24.6%) carbohydrate metabolic process (0.2%) glycolate biosynthetic process (0.2%)" "cytosol (24.6%) mitochondrion (0.4%)" "tryptophan-tRNA ligase activity (24.8%) ATP binding (23%) ligase activity (1.5%)" "IPR014729 (17.9%) IPR050203 (17.8%) IPR002305 (16.7%)" "Rossmann-like alpha/beta/alpha sandwich fold (17.9%) Tryptophan--tRNA ligase (17.8%) Aminoacyl-tRNA synthetase, class Ic (16.7%)" LGNKGDECAITAIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.5.1.78 (98.3%) 2.5.1.9 (0.9%) 6.3.3.- (0.9%)" "6,7-dimethyl-8-ribityllumazine synthase (98.3%) riboflavin synthase (0.9%) Cyclo-ligases (0.9%)" "GO:0009231 (23.7%) GO:0005975 (0.2%)" "GO:0009349 (23.7%) GO:0005829 (23.5%)" "GO:0000906 (23.5%) GO:0016874 (4.5%) GO:0003677 (0.2%)" "riboflavin biosynthetic process (23.7%) carbohydrate metabolic process (0.2%)" "riboflavin synthase complex (23.7%) cytosol (23.5%)" "6,7-dimethyl-8-ribityllumazine synthase activity (23.5%) ligase activity (4.5%) DNA binding (0.2%)" "IPR002180 (33.3%) IPR036467 (33.3%) IPR034964 (33%)" "Lumazine/riboflavin synthase (33.3%) Lumazine/riboflavin synthase superfamily (33.3%) Lumazine synthase (33%)" FSLPDHVSAQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" DLSGFVDGTENPAGEETRR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "1.11.1.- (68.8%) 4.99.1.1 (25.4%) 4.98.1.1 (3.6%)" "Peroxidases (68.8%) Transferred entry: 4.98.1.1 (25.4%) protoporphyrin ferrochelatase (3.6%)" "GO:0005829 (32.4%) GO:0005737 (0.1%)" "GO:0004601 (33%) GO:0020037 (32.4%) GO:0016829 (1.8%)" "cytosol (32.4%) cytoplasm (0.1%)" "peroxidase activity (33%) heme binding (32.4%) lyase activity (1.8%)" "IPR006314 (25%) IPR048328 (25%) IPR011008 (25%)" "Dyp-type peroxidase (25%) Dyp-type peroxidase, C-terminal domain (25%) Dimeric alpha-beta barrel (25%)" QVFEYLELLDGGKYTHAQLEEIIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.22 (100%) ribosylnicotinamide kinase (100%) "GO:0016301 (66.7%) GO:0050262 (33.3%)" "kinase activity (66.7%) ribosylnicotinamide kinase activity (33.3%)" "IPR025393 (50.8%) IPR029044 (49.2%)" "Domain of unknown function DUF4301 (50.8%) Nucleotide-diphospho-sugar transferases (49.2%)" VDKSGIVHTSIGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006417 (16.7%) GO:0006412 (16.4%)" "GO:0015934 (16.4%) GO:0005840 (0.7%) GO:1990904 (0.6%)" "GO:0000049 (16.4%) GO:0003735 (16.4%) GO:0019843 (16.4%)" "regulation of translation (16.7%) translation (16.4%)" "large ribosomal subunit (16.4%) ribosome (0.7%) ribonucleoprotein complex (0.6%)" "tRNA binding (16.4%) structural constituent of ribosome (16.4%) rRNA binding (16.4%)" "IPR023674 (16.9%) IPR028364 (16.9%) IPR023673 (16.8%)" "Ribosomal protein uL1-like (16.9%) Ribosomal protein uL1/ribosomal biogenesis protein (16.9%) Large ribosomal subunit protein uL1, conserved site (16.8%)" LADFIEIGELMAYDALNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (17%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (17%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" AAAANIVPNTTGAAK Bacteria Bacteria "1.2.1.- (94.2%) 1.2.1.12 (5.8%)" "With NAD(+) or NADP(+) as acceptor (94.2%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (5.8%)" GO:0006006 (25%) "GO:0016620 (25%) GO:0050661 (25%) GO:0051287 (25%)" glucose metabolic process (25%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (25%) NADP binding (25%) NAD binding (25%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" HQDLFAILGQLAER root "3.4.24.- (95.2%) 3.4.-.- (4.8%)" "Metalloendopeptidases (95.2%) Acting on peptide bonds (peptidases) (4.8%)" "GO:0006508 (33.2%) GO:0016485 (0.1%)" "GO:0005829 (33.1%) GO:1905368 (0.1%)" "GO:0008237 (33.4%) GO:0008233 (0.1%) GO:0005506 (0.1%)" "proteolysis (33.2%) protein processing (0.1%)" "cytosol (33.1%) peptidase complex (0.1%)" "metallopeptidase activity (33.4%) peptidase activity (0.1%) iron ion binding (0.1%)" "IPR002510 (14.4%) IPR036059 (14.4%) IPR051463 (14.4%)" "Metalloprotease TldD/E, N-terminal domain (14.4%) Metalloprotease TldD/PmbA superfamily (14.4%) Peptidase U62 metalloprotease (14.4%)" IALSTADDKVTAPVNIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae NLATNHMVQKGEAVGVIAAQSIGEPGTQLTLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.4%) GO:0000428 (17.4%) "GO:0003677 (17.4%) GO:0003899 (17.4%) GO:0000287 (13.6%)" DNA-templated transcription (17.4%) DNA-directed RNA polymerase complex (17.4%) "DNA binding (17.4%) DNA-directed RNA polymerase activity (17.4%) magnesium ion binding (13.6%)" "IPR007081 (9.4%) IPR045867 (9.4%) IPR000722 (9%)" "RNA polymerase Rpb1, domain 5 (9.4%) DNA-directed RNA polymerase, subunit beta-prime (9.4%) RNA polymerase, alpha subunit (9%)" AYNRELDPMIKK Bacteria Bacteria 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (29.7%) GO:0005975 (0.1%) GO:0044814 (0.1%)" "GO:0005829 (32.3%) GO:0016020 (0.1%)" "GO:0008861 (32.3%) GO:0016829 (4.9%) GO:0016746 (0.5%)" "glucose metabolic process (29.7%) carbohydrate metabolic process (0.1%) pyruvate fermentation via PFL (0.1%)" "cytosol (32.3%) membrane (0.1%)" "formate C-acetyltransferase activity (32.3%) lyase activity (4.9%) acyltransferase activity (0.5%)" "IPR004184 (21.1%) IPR050244 (21.1%) IPR005949 (19.4%)" "Pyruvate formate lyase domain (21.1%) Autonomous Glycyl Radical Cofactor (21.1%) Formate acetyltransferase (19.4%)" ELDKYPVSTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" AVDEYIPTPTHDLDKPFLMPIEDVFTISGR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20.3%) "GO:0003746 (20.3%) GO:0005525 (20.3%) GO:0003924 (19.8%)" cytosol (20.3%) "translation elongation factor activity (20.3%) GTP binding (20.3%) GTPase activity (19.8%)" "IPR004161 (9.1%) IPR009000 (9.1%) IPR033720 (9.1%)" "Translation elongation factor EFTu-like, domain 2 (9.1%) Translation protein, beta-barrel domain superfamily (9.1%) Elongation factor Tu, domain 2 (9.1%)" MGVVVCYAPNGSDLDALRDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "6.3.1.21 (95.7%) 2.1.2.- (4.3%)" "phosphoribosylglycinamide formyltransferase 2 (95.7%) Hydroxymethyl-, formyl- and related transferases (4.3%)" GO:0006189 (16.7%) GO:0005829 (16.7%) "GO:0000287 (16.7%) GO:0004644 (16.7%) GO:0005524 (16.7%)" 'de novo' IMP biosynthetic process (16.7%) cytosol (16.7%) "magnesium ion binding (16.7%) phosphoribosylglycinamide formyltransferase activity (16.7%) ATP binding (16.7%)" "IPR003135 (12.5%) IPR005862 (12.5%) IPR011054 (12.5%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.5%) Formate-dependent phosphoribosylglycinamide formyltransferase (12.5%) Rudiment single hybrid motif (12.5%)" VLNDNWGITEGLMTTVHSTTATQK Lawsonibacter hominis Bacteria Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Lawsonibacter Lawsonibacter hominis 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (20%) GO:0006096 (20%)" "GO:0016620 (20%) GO:0050661 (20%) GO:0051287 (20%)" "glucose metabolic process (20%) glycolytic process (20%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (20%) NADP binding (20%) NAD binding (20%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" SKLTAEQYAVTQQNATER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.8.4.12 (61.9%) 1.8.4.11 (38.1%)" "peptide-methionine (R)-S-oxide reductase (61.9%) peptide-methionine (S)-S-oxide reductase (38.1%)" "GO:0006979 (21.3%) GO:0030091 (21.3%)" GO:0005737 (21.3%) "GO:0033743 (21.3%) GO:0008113 (13.1%) GO:0033744 (1.6%)" "response to oxidative stress (21.3%) protein repair (21.3%)" cytoplasm (21.3%) "peptide-methionine (R)-S-oxide reductase activity (21.3%) peptide-methionine (S)-S-oxide reductase activity (13.1%) L-methionine (S)-S-oxide reductase activity (1.6%)" "IPR002579 (23.6%) IPR011057 (23.6%) IPR028427 (23.6%)" "Peptide methionine sulphoxide reductase MrsB domain (23.6%) Mss4-like superfamily (23.6%) Peptide methionine sulfoxide reductase MsrB (23.6%)" VLDAGTQYQLPTFKE Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (3.8%) "GO:0000287 (19.2%) GO:0004743 (19.2%) GO:0005524 (19.2%)" response to stress (3.8%) "magnesium ion binding (19.2%) pyruvate kinase activity (19.2%) ATP binding (19.2%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" RTYYSITNQSPVSDEEIER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0034599 (33.3%) GO:0005737 (33.3%) GO:0016491 (33.3%) cellular response to oxidative stress (33.3%) cytoplasm (33.3%) oxidoreductase activity (33.3%) "IPR000415 (33.3%) IPR029479 (33.3%) IPR033877 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase Frm2/Hbn1-like (33.3%)" KQIDQLTEFVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.12 (100%) aspartate--tRNA ligase (100%) "GO:0006422 (19.4%) GO:0006418 (0.5%) GO:0006430 (0.5%)" GO:0005737 (19.9%) "GO:0005524 (19.9%) GO:0003676 (19.4%) GO:0004815 (19.4%)" "aspartyl-tRNA aminoacylation (19.4%) tRNA aminoacylation for protein translation (0.5%) lysyl-tRNA aminoacylation (0.5%)" cytoplasm (19.9%) "ATP binding (19.9%) nucleic acid binding (19.4%) aspartate-tRNA ligase activity (19.4%)" "IPR004115 (9.3%) IPR004364 (9.3%) IPR045864 (9.3%)" "GAD-like domain superfamily (9.3%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.3%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (9.3%)" LEGVLKEDFVRLPYTEGIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.4%) GO:0005737 (19.4%) "GO:0004816 (20.4%) GO:0005524 (20.4%) GO:0003676 (19.4%)" asparaginyl-tRNA aminoacylation (20.4%) cytoplasm (19.4%) "asparagine-tRNA ligase activity (20.4%) ATP binding (20.4%) nucleic acid binding (19.4%)" "IPR002312 (14.5%) IPR004364 (14.5%) IPR004522 (14.5%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.5%) Aminoacyl-tRNA synthetase, class II (D/K/N) (14.5%) Asparagine-tRNA ligase (14.5%)" GVMVVEERENIAPGFSQK root "GO:0006979 (0.4%) GO:0009411 (0.4%) GO:0009636 (0.4%)" "GO:0042597 (97.5%) GO:0030288 (0.4%) GO:0033573 (0.4%)" GO:0005381 (0.4%) "response to oxidative stress (0.4%) response to UV (0.4%) response to toxic substance (0.4%)" "periplasmic space (97.5%) outer membrane-bounded periplasmic space (0.4%) high-affinity iron permease complex (0.4%)" iron ion transmembrane transporter activity (0.4%) "IPR028096 (14.5%) IPR050894 (14.5%) IPR008972 (14.4%)" "EfeO-type cupredoxin-like domain (14.5%) Iron uptake system component EfeM/EfeO (14.5%) Cupredoxin (14.4%)" VSQLNLLPQGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.3.99.1 (66.7%) 1.3.5.1 (27.8%) 1.3.5.4 (5.6%)" "Deleted entry (66.7%) succinate dehydrogenase (27.8%) Transferred entry: 1.3.5.1 (5.6%)" "GO:0009060 (24%) GO:0022904 (24%)" "GO:0009055 (24%) GO:0051537 (24%) GO:0016491 (2.9%)" "aerobic respiration (24%) respiratory electron transport chain (24%)" "electron transfer activity (24%) 2 iron, 2 sulfur cluster binding (24%) oxidoreductase activity (2.9%)" "IPR009051 (14.4%) IPR017896 (14.4%) IPR006058 (14.2%)" "Alpha-helical ferredoxin (14.4%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14.4%) 2Fe-2S ferredoxin, iron-sulphur binding site (14.2%)" GLILVDTKYEFGK root "6.3.2.6 (99.7%) 2.5.1.18 (0.2%) 4.1.1.21 (0.1%)" "phosphoribosylaminoimidazolesuccinocarboxamide synthase (99.7%) glutathione transferase (0.2%) phosphoribosylaminoimidazole carboxylase (0.1%)" "GO:0006189 (24.9%) GO:0009733 (0.6%) GO:0006749 (0.1%)" "GO:0005737 (19%) GO:0009570 (5%) GO:0005829 (0%)" "GO:0004639 (25%) GO:0005524 (25%) GO:0004364 (0.1%)" "'de novo' IMP biosynthetic process (24.9%) response to auxin (0.6%) glutathione metabolic process (0.1%)" "cytoplasm (19%) chloroplast stroma (5%) cytosol (0%)" "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%) glutathione transferase activity (0.1%)" "IPR018236 (48.8%) IPR028923 (48.8%) IPR001636 (0.4%)" "SAICAR synthetase, conserved site (48.8%) SAICAR synthetase/ADE2, N-terminal (48.8%) Phosphoribosylaminoimidazole-succinocarboxamide synthase (0.4%)" GTEIELDGEKYLIMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0051085 (0.5%) GO:0005737 (14.4%) "GO:0005524 (17%) GO:0044183 (17%) GO:0046872 (17%)" obsolete chaperone cofactor-dependent protein refolding (0.5%) cytoplasm (14.4%) "ATP binding (17%) protein folding chaperone (17%) metal ion binding (17%)" "IPR011032 (26%) IPR020818 (26%) IPR037124 (26%)" "GroES-like superfamily (26%) GroES chaperonin family (26%) GroES chaperonin superfamily (26%)" ESGFFPEWASPGHR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0006516 (19.5%) GO:0005975 (19.4%)" GO:0005829 (19.5%) "GO:0000224 (19.5%) GO:0030246 (19.4%) GO:0016798 (2.7%)" "glycoprotein catabolic process (19.5%) carbohydrate metabolic process (19.4%)" cytosol (19.5%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.5%) carbohydrate binding (19.4%) hydrolase activity, acting on glycosyl bonds (2.7%)" "IPR012939 (16.7%) IPR050883 (16.7%) IPR005887 (16.7%)" "Glycosyl hydrolase family 92 (16.7%) Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (16.7%) Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%)" SIDTAAAYKNEEGVGK Bacteria Bacteria "1.1.1.274 (85.3%) 1.1.1.- (8.8%) 1.1.1.2 (2.9%)" "2,5-didehydrogluconate reductase (2-dehydro-D-gluconate-forming) (85.3%) With NAD(+) or NADP(+) as acceptor (8.8%) alcohol dehydrogenase (NADP(+)) (2.9%)" "GO:0019853 (48.4%) GO:0034220 (0.3%) GO:0051596 (0.3%)" GO:0005829 (0.3%) "GO:0050580 (36.9%) GO:0016616 (11.8%) GO:0016491 (1%)" "L-ascorbic acid biosynthetic process (48.4%) monoatomic ion transmembrane transport (0.3%) methylglyoxal catabolic process (0.3%)" cytosol (0.3%) "2,5-didehydrogluconate reductase activity (36.9%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (11.8%) oxidoreductase activity (1%)" "IPR018170 (21.4%) IPR020471 (21.4%) IPR023210 (21.4%)" "Aldo/keto reductase, conserved site (21.4%) Aldo-keto reductase (21.4%) NADP-dependent oxidoreductase domain (21.4%)" GILDAHNSDIR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (16.7%) "GO:0000287 (16.7%) GO:0004743 (16.7%) GO:0005524 (16.7%)" response to stress (16.7%) "magnesium ion binding (16.7%) pyruvate kinase activity (16.7%) ATP binding (16.7%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" FSSVADFSVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis SGITGEKMELDGYCVVEGAYTTVYNHMGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" ERGITINTSHVEYQTANR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (15.7%) GO:0032045 (10.9%)" "GO:0003746 (15.8%) GO:0003924 (15.8%) GO:0005525 (15.8%)" "cytosol (15.7%) guanyl-nucleotide exchange factor complex (10.9%)" "translation elongation factor activity (15.8%) GTPase activity (15.8%) GTP binding (15.8%)" "IPR000795 (8.4%) IPR027417 (8.4%) IPR050055 (8.4%)" "Translational (tr)-type GTP-binding domain (8.4%) P-loop containing nucleoside triphosphate hydrolase (8.4%) Elongation factor Tu GTPase (8.4%)" MDKDISVTLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0009060 (25%) GO:0022904 (25%)" "GO:0009055 (25%) GO:0051537 (25%)" "aerobic respiration (25%) respiratory electron transport chain (25%)" "electron transfer activity (25%) 2 iron, 2 sulfur cluster binding (25%)" "IPR006058 (14.3%) IPR009051 (14.3%) IPR012675 (14.3%)" "2Fe-2S ferredoxin, iron-sulphur binding site (14.3%) Alpha-helical ferredoxin (14.3%) Beta-grasp domain superfamily (14.3%)" MVPCSVYLEGEYGESDICCGVPVILGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.37 (94.7%) 1.1.1.- (5.3%)" "malate dehydrogenase (94.7%) With NAD(+) or NADP(+) as acceptor (5.3%)" "GO:0006089 (24.6%) GO:0006099 (24.6%)" "GO:0004459 (24.6%) GO:0030060 (24.6%) GO:0016616 (1.4%)" "lactate metabolic process (24.6%) tricarboxylic acid cycle (24.6%)" "L-lactate dehydrogenase (NAD+) activity (24.6%) L-malate dehydrogenase (NAD+) activity (24.6%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (1.4%)" "IPR022383 (17.8%) IPR001236 (16.8%) IPR011275 (16.8%)" "Lactate/malate dehydrogenase, C-terminal (17.8%) Lactate/malate dehydrogenase, N-terminal (16.8%) Malate dehydrogenase, type 3 (16.8%)" TISAVINTFFGTNALSQFMDQTNPLAEITHK LGVDVYAVSTDTHFTHK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.11.1.26 (100%) NADH-dependent peroxiredoxin (100%) "GO:0006979 (14.6%) GO:0042744 (14.6%) GO:0045454 (14.6%)" "GO:0005829 (14.6%) GO:0005737 (0.2%) GO:0009321 (0.2%)" "GO:0008379 (14.6%) GO:0102039 (10.4%) GO:0004601 (0.3%)" "response to oxidative stress (14.6%) hydrogen peroxide catabolic process (14.6%) cell redox homeostasis (14.6%)" "cytosol (14.6%) cytoplasm (0.2%) alkyl hydroperoxide reductase complex (0.2%)" "thioredoxin peroxidase activity (14.6%) NADH-dependent peroxiredoxin activity (10.4%) peroxidase activity (0.3%)" "IPR000866 (14.4%) IPR019479 (14.4%) IPR036249 (14.4%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (14.4%) Peroxiredoxin, C-terminal (14.4%) Thioredoxin-like superfamily (14.4%)" FGHINAMEIVSAMPEYTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" NAMGVGIPGTGMVGLPIAIALGSLIGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0019450 (50%) GO:0080146 (50%) L-cysteine catabolic process to pyruvate (50%) L-cysteine desulfhydrase activity (50%) "IPR005130 (50%) IPR021144 (50%)" "Serine dehydratase-like, alpha subunit (50%) Uncharacterised protein family UPF0597 (50%)" FGITEMEVTDEVFESK Bacillati Bacteria Bacillati 2.1.3.3 (100%) ornithine carbamoyltransferase (100%) "GO:0019240 (20.4%) GO:0042450 (20.4%)" GO:0005737 (18.3%) "GO:0004585 (20.4%) GO:0016597 (20.4%)" "citrulline biosynthetic process (20.4%) L-arginine biosynthetic process via ornithine (20.4%)" cytoplasm (18.3%) "ornithine carbamoyltransferase activity (20.4%) amino acid binding (20.4%)" "IPR002292 (17%) IPR006130 (17%) IPR006131 (17%)" "Ornithine/putrescine carbamoyltransferase (17%) Aspartate/ornithine carbamoyltransferase (17%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (17%)" HSDIILKPLDGMGGASIFR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 6.3.2.3 (100%) glutathione synthase (100%) "GO:0006750 (0.2%) GO:0051289 (0.2%)" "GO:0005737 (24.6%) GO:0005829 (0.2%)" "GO:0004363 (24.6%) GO:0005524 (24.6%) GO:0046872 (24.4%)" "glutathione biosynthetic process (0.2%) protein homotetramerization (0.2%)" "cytoplasm (24.6%) cytosol (0.2%)" "glutathione synthase activity (24.6%) ATP binding (24.6%) metal ion binding (24.4%)" "IPR004218 (16.9%) IPR013815 (16.9%) IPR004215 (16.7%)" "Prokaryotic glutathione synthetase, ATP-binding (16.9%) ATP-grasp fold, subdomain 1 (16.9%) Prokaryotic glutathione synthetase, N-terminal (16.7%)" VTCYPSFEQYLDGADCTNEPVVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006508 (5.9%) GO:0005737 (88.2%) GO:0008233 (5.9%) proteolysis (5.9%) cytoplasm (88.2%) peptidase activity (5.9%) "IPR002818 (25%) IPR006287 (25%) IPR029062 (25%)" "DJ-1/PfpI (25%) Protein/nucleic acid deglycase DJ-1 (25%) Class I glutamine amidotransferase-like (25%)" LSPILDEFAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR013766 (33.3%) IPR017937 (33.3%) IPR036249 (33.3%)" "Thioredoxin domain (33.3%) Thioredoxin, conserved site (33.3%) Thioredoxin-like superfamily (33.3%)" AIHAGLECGLFLEKYPSLDMVSFGPTLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (32.6%) IPR002933 (32.6%) IPR011650 (32.6%)" "Peptidase M20C, Xaa-His dipeptidase (32.6%) Peptidase M20 (32.6%) Peptidase M20, dimerisation domain (32.6%)" THYIDESEIAVLQEWRK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25%) GO:0044205 (25%)" "GO:0000287 (25%) GO:0004588 (25%)" "pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" "magnesium ion binding (25%) orotate phosphoribosyltransferase activity (25%)" "IPR000836 (25%) IPR004467 (25%) IPR023031 (25%)" "Phosphoribosyltransferase domain (25%) Orotate phosphoribosyl transferase domain (25%) Orotate phosphoribosyltransferase (25%)" STISMYNLGNTLSQQQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" TNDANGVINNLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" ANQVNDYLELIKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.3.1.1 (100%) dihydrouracil dehydrogenase (NAD(+)) (100%) "GO:0006210 (12%) GO:0006212 (12%) GO:0006222 (8%)" GO:0005737 (16%) "GO:0004152 (14%) GO:0002058 (12%) GO:0050661 (12%)" "thymine catabolic process (12%) uracil catabolic process (12%) UMP biosynthetic process (8%)" cytoplasm (16%) "dihydroorotate dehydrogenase activity (14%) uracil binding (12%) NADP binding (12%)" "IPR005720 (30.8%) IPR012135 (30.8%) IPR013785 (30.8%)" "Dihydroorotate dehydrogenase, catalytic (30.8%) Dihydroorotate dehydrogenase, class 1/ 2 (30.8%) Aldolase-type TIM barrel (30.8%)" AIADLLHSYDMYLHMDGAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.1.2.48 (100%) low-specificity L-threonine aldolase (100%) GO:0006520 (42.9%) "GO:0016829 (42.9%) GO:0008483 (14.3%)" amino acid metabolic process (42.9%) "lyase activity (42.9%) transaminase activity (14.3%)" "IPR001597 (25%) IPR015421 (25%) IPR015422 (25%)" "Aromatic amino acid beta-eliminating lyase/threonine aldolase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%) Pyridoxal phosphate-dependent transferase, small domain (25%)" EADNEVISPIYLKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016020 (100%) membrane (100%) "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" FGLQDPGNIYGR Bacteria Bacteria "2.5.1.49 (46.9%) 4.4.1.11 (40.6%) 2.5.1.48 (6.3%)" "O-acetylhomoserine aminocarboxypropyltransferase (46.9%) methionine gamma-lyase (40.6%) cystathionine gamma-synthase (6.3%)" "GO:0019346 (14%) GO:0071269 (14%) GO:0006535 (13.9%)" GO:0005737 (13.9%) "GO:0004124 (14%) GO:0030170 (14%) GO:0003961 (13.9%)" "transsulfuration (14%) L-homocysteine biosynthetic process (14%) cysteine biosynthetic process from serine (13.9%)" cytoplasm (13.9%) "cysteine synthase activity (14%) pyridoxal phosphate binding (14%) O-acetylhomoserine aminocarboxypropyltransferase activity (13.9%)" "IPR000277 (16.7%) IPR006235 (16.7%) IPR015421 (16.7%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (16.7%) O-acetylhomoserine/O-acetylserine sulfhydrylase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" MIAHLPEEQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "4.1.1.12 (94.1%) 2.6.1.1 (5.9%)" "aspartate 4-decarboxylase (94.1%) aspartate transaminase (5.9%)" GO:0006520 (27.3%) "GO:0030170 (27.3%) GO:0008483 (24.7%) GO:0047688 (10.4%)" amino acid metabolic process (27.3%) "pyridoxal phosphate binding (27.3%) transaminase activity (24.7%) aspartate 4-decarboxylase activity (10.4%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" ELLERVDAEVAAYDQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001854 (50%) IPR036049 (50%)" "Large ribosomal subunit protein uL29 (50%) Large ribosomal subunit protein uL29 superfamily (50%)" HLKEDDSIEIINIHGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006355 (20.1%) GO:0000160 (0.3%)" "GO:0005829 (19.8%) GO:0032993 (19.8%)" "GO:0000156 (19.8%) GO:0000976 (19.8%) GO:0003677 (0.3%)" "regulation of DNA-templated transcription (20.1%) phosphorelay signal transduction system (0.3%)" "cytosol (19.8%) protein-DNA complex (19.8%)" "phosphorelay response regulator activity (19.8%) transcription cis-regulatory region binding (19.8%) DNA binding (0.3%)" "IPR001867 (17.6%) IPR036388 (17.6%) IPR001789 (17.4%)" "OmpR/PhoB-type DNA-binding domain (17.6%) Winged helix-like DNA-binding domain superfamily (17.6%) Signal transduction response regulator, receiver domain (17.4%)" GYTSLVVVPVGHHSVEDFNATLPK root "1.-.-.- (58.3%) 1.5.1.34 (41.7%)" "Oxidoreductases (58.3%) 6,7-dihydropteridine reductase (41.7%)" GO:0046256 (28%) "GO:0005829 (28%) GO:0016020 (0.2%)" "GO:0046857 (27.8%) GO:0004155 (12.5%) GO:0016491 (2.6%)" 2,4,6-trinitrotoluene catabolic process (28%) "cytosol (28%) membrane (0.2%)" "oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor (27.8%) 6,7-dihydropteridine reductase activity (12.5%) oxidoreductase activity (2.6%)" "IPR000415 (26.4%) IPR029479 (26.1%) IPR050627 (24.1%)" "Nitroreductase-like (26.4%) Nitroreductase (26.1%) Nitroreductase/BluB (24.1%)" VIMEGLKDLGFVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25.6%) GO:0005829 (24.4%) "GO:0030145 (24.4%) GO:0070006 (24.4%) GO:0004177 (1.2%)" proteolysis (25.6%) cytosol (24.4%) "manganese ion binding (24.4%) metalloaminopeptidase activity (24.4%) aminopeptidase activity (1.2%)" "IPR000994 (20.4%) IPR036005 (20.4%) IPR052433 (20.4%)" "Peptidase M24 (20.4%) Creatinase/aminopeptidase-like (20.4%) Xaa-Pro dipeptidase-like (20.4%)" QLYNAPTIVER root 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (12.4%) GO:0044210 (12.2%) GO:0006241 (0.4%)" "GO:0005829 (12.3%) GO:0097268 (7.9%) GO:0000015 (0.1%)" "GO:0003883 (12.4%) GO:0005524 (12.4%) GO:0042802 (12.4%)" "pyrimidine nucleobase biosynthetic process (12.4%) 'de novo' CTP biosynthetic process (12.2%) CTP biosynthetic process (0.4%)" "cytosol (12.3%) cytoophidium (7.9%) phosphopyruvate hydratase complex (0.1%)" "CTP synthase activity (12.4%) ATP binding (12.4%) identical protein binding (12.4%)" "IPR004468 (17.1%) IPR017926 (17.1%) IPR029062 (17.1%)" "CTP synthase (17.1%) Glutamine amidotransferase (17.1%) Class I glutamine amidotransferase-like (17.1%)" MIGDPTGALTR root "1.11.1.26 (97.3%) 1.11.1.15 (1.4%) 1.11.1.24 (1%)" "NADH-dependent peroxiredoxin (97.3%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (1.4%) thioredoxin-dependent peroxiredoxin (1%)" "GO:0006979 (14.7%) GO:0042744 (14.7%) GO:0045454 (14.7%)" "GO:0005829 (14.7%) GO:0016020 (0%) GO:0005737 (0%)" "GO:0008379 (14.7%) GO:0102039 (11.7%) GO:0004601 (0.1%)" "response to oxidative stress (14.7%) hydrogen peroxide catabolic process (14.7%) cell redox homeostasis (14.7%)" "cytosol (14.7%) membrane (0%) cytoplasm (0%)" "thioredoxin peroxidase activity (14.7%) NADH-dependent peroxiredoxin activity (11.7%) peroxidase activity (0.1%)" "IPR036249 (14.4%) IPR000866 (14.4%) IPR050217 (14.4%)" "Thioredoxin-like superfamily (14.4%) Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (14.4%) Thiol-specific antioxidant peroxiredoxin (14.4%)" ELYPVVHVGDESWR root GO:0006276 (50%) GO:0008657 (50%) plasmid maintenance (50%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity (50%) "IPR002712 (50%) IPR011067 (50%)" "Toxin CcdB (50%) Plasmid maintenance toxin/Cell growth inhibitor (50%)" ILKDLDEDIRGKDVLIVEDIIDSGNTLSK root 2.4.2.8 (100%) hypoxanthine phosphoribosyltransferase (100%) "GO:0032264 (10%) GO:0006178 (10%) GO:0032263 (10%)" "GO:0005829 (10%) GO:0005737 (0%) GO:0032991 (0%)" "GO:0004422 (10%) GO:0000287 (10%) GO:0000166 (10%)" "IMP salvage (10%) guanine salvage (10%) GMP salvage (10%)" "cytosol (10%) cytoplasm (0%) protein-containing complex (0%)" "hypoxanthine phosphoribosyltransferase activity (10%) magnesium ion binding (10%) nucleotide binding (10%)" "IPR000836 (25.1%) IPR029057 (25.1%) IPR050408 (25.1%)" "Phosphoribosyltransferase domain (25.1%) Phosphoribosyltransferase-like (25.1%) Hypoxanthine-guanine phosphoribosyltransferase (25.1%)" AMDMMQTAQLLGFDTNIVGCTNDYEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25%) GO:0006099 (25%)" "GO:0004459 (25%) GO:0030060 (25%)" "lactate metabolic process (25%) tricarboxylic acid cycle (25%)" "L-lactate dehydrogenase (NAD+) activity (25%) L-malate dehydrogenase (NAD+) activity (25%)" "IPR001236 (17.2%) IPR011275 (17.2%) IPR022383 (17.2%)" "Lactate/malate dehydrogenase, N-terminal (17.2%) Malate dehydrogenase, type 3 (17.2%) Lactate/malate dehydrogenase, C-terminal (17.2%)" YESDVTEDELLAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.5.1.5 (50%) 3.5.4.9 (50%)" "methylenetetrahydrofolate dehydrogenase (NADP(+)) (50%) methenyltetrahydrofolate cyclohydrolase (50%)" "GO:0000105 (14.3%) GO:0006164 (14.3%) GO:0009086 (14.3%)" GO:0005829 (14.3%) "GO:0004477 (14.3%) GO:0004488 (14.3%)" "L-histidine biosynthetic process (14.3%) purine nucleotide biosynthetic process (14.3%) methionine biosynthetic process (14.3%)" cytosol (14.3%) "methenyltetrahydrofolate cyclohydrolase activity (14.3%) methylenetetrahydrofolate dehydrogenase (NADP+) activity (14.3%)" "IPR000672 (16.7%) IPR020630 (16.7%) IPR020631 (16.7%)" "Tetrahydrofolate dehydrogenase/cyclohydrolase (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (16.7%)" NCYKADPAYGK Bacteria Bacteria 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" GO:0005737 (16.7%) "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16.7%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" cytoplasm (16.7%) "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16.7%)" "IPR002226 (12.5%) IPR010582 (12.5%) IPR011614 (12.5%)" "Catalase haem-binding site (12.5%) Catalase immune-responsive domain (12.5%) Catalase core domain (12.5%)" VSGWDAYGDFER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (50%) GO:0016788 (50%) cytoplasm (50%) hydrolase activity, acting on ester bonds (50%) "IPR004843 (25.3%) IPR029052 (25.3%) IPR011658 (24.1%)" "Calcineurin-like, phosphoesterase domain (25.3%) Metallo-dependent phosphatase-like (25.3%) PA14 domain (24.1%)" LTDTVEGSPIDAGK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.3.1 (100%) phosphoribosylformylglycinamidine cyclo-ligase (100%) "GO:0006189 (16.6%) GO:0046084 (16.6%)" GO:0005829 (16.6%) "GO:0004637 (16.6%) GO:0004641 (16.6%) GO:0005524 (16.6%)" "'de novo' IMP biosynthetic process (16.6%) adenine biosynthetic process (16.6%)" cytosol (16.6%) "phosphoribosylamine-glycine ligase activity (16.6%) phosphoribosylformylglycinamidine cyclo-ligase activity (16.6%) ATP binding (16.6%)" "IPR004733 (20%) IPR010918 (20%) IPR016188 (20%)" "Phosphoribosylformylglycinamidine cyclo-ligase (20%) PurM-like, C-terminal domain (20%) PurM-like, N-terminal domain (20%)" NALTDAEGDFDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" ESDYNKLMTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.6%) GO:0005737 (18.8%) "GO:0005524 (20.6%) GO:0004816 (20%) GO:0003676 (18.8%)" asparaginyl-tRNA aminoacylation (20.6%) cytoplasm (18.8%) "ATP binding (20.6%) asparagine-tRNA ligase activity (20%) nucleic acid binding (18.8%)" "IPR002312 (14.8%) IPR004364 (14.8%) IPR045864 (14.8%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.8%) Aminoacyl-tRNA synthetase, class II (D/K/N) (14.8%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.8%)" VDFNVPLDENFNITDDTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" TDQVVLIDDYAHHPAELR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.2.8 (100%) UDP-N-acetylmuramate--L-alanine ligase (100%) "GO:0008360 (12.6%) GO:0009252 (12.6%) GO:0051301 (12.6%)" "GO:0005737 (12.6%) GO:0016020 (11.6%)" "GO:0005524 (12.6%) GO:0008763 (12.6%)" "regulation of cell shape (12.6%) peptidoglycan biosynthetic process (12.6%) cell division (12.6%)" "cytoplasm (12.6%) membrane (11.6%)" "ATP binding (12.6%) UDP-N-acetylmuramate-L-alanine ligase activity (12.6%)" "IPR000713 (14.3%) IPR004101 (14.3%) IPR005758 (14.3%)" "Mur ligase, N-terminal catalytic domain (14.3%) Mur ligase, C-terminal (14.3%) UDP-N-acetylmuramate--L-alanine ligase (14.3%)" TAVEFIEPLSHDEGVKNATDLFR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10.1%) IPR006203 (10.1%) IPR006204 (10.1%)" "Galactokinase (10.1%) GHMP kinase, ATP-binding, conserved site (10.1%) GHMP kinase N-terminal domain (10.1%)" EVADNTSILYGGSCKPSNAKELFANPDVDGGLIGGAALK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" RGELGIMGTELNSELAK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "3.4.21.107 (99.2%) 3.4.21.- (0.7%) 1.3.1.74 (0.1%)" "peptidase Do (99.2%) Serine endopeptidases (0.7%) 2-alkenal reductase [NAD(P)(+)] (0.1%)" "GO:0051603 (28.5%) GO:0006515 (2.2%) GO:0006508 (1.3%)" "GO:0030313 (27.4%) GO:0042597 (5.3%) GO:0005886 (0.1%)" "GO:0004252 (31.2%) GO:0042802 (2.2%) GO:0008233 (0.5%)" "proteolysis involved in protein catabolic process (28.5%) protein quality control for misfolded or incompletely synthesized proteins (2.2%) proteolysis (1.3%)" "cell envelope (27.4%) periplasmic space (5.3%) plasma membrane (0.1%)" "serine-type endopeptidase activity (31.2%) identical protein binding (2.2%) peptidase activity (0.5%)" "IPR036034 (20.2%) IPR001478 (20.1%) IPR001940 (20%)" "PDZ superfamily (20.2%) PDZ domain (20.1%) Peptidase S1C (20%)" AIAQVGTISANSDETVGKLIAEAMDK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.2%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (16.7%) GO:1990220 (0%) GO:0005829 (0%)" "GO:0140662 (17.2%) GO:0005524 (17.2%) GO:0016853 (16.9%)" "protein refolding (17.2%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (16.7%) GroEL-GroES complex (0%) cytosol (0%)" "ATP-dependent protein folding chaperone (17.2%) ATP binding (17.2%) isomerase activity (16.9%)" "IPR001844 (17%) IPR027413 (17%) IPR002423 (16.9%)" "Chaperonin Cpn60/GroEL (17%) GroEL-like equatorial domain superfamily (17%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%)" VVSMPSTDAFDKQDAAYR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "2.2.1.1 (99.8%) 2.2.1.- (0.2%)" "transketolase (99.8%) Transketolases and transaldolases (0.2%)" "GO:0009052 (22.6%) GO:0006098 (2.1%) GO:0006310 (0%)" "GO:0005829 (24.7%) GO:0016020 (0.8%)" "GO:0004802 (24.7%) GO:0046872 (24.6%) GO:0016740 (0.3%)" "pentose-phosphate shunt, non-oxidative branch (22.6%) pentose-phosphate shunt (2.1%) DNA recombination (0%)" "cytosol (24.7%) membrane (0.8%)" "transketolase activity (24.7%) metal ion binding (24.6%) transferase activity (0.3%)" "IPR033247 (11.7%) IPR055152 (11.7%) IPR009014 (11.7%)" "Transketolase family (11.7%) Transketolase-like, C-terminal domain (11.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (11.7%)" MAELGTQLAHVDGGVPNMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20.1%) IPR018189 (20.1%) IPR035482 (20.1%)" "Phosphoglucose isomerase (PGI) (20.1%) Phosphoglucose isomerase, conserved site (20.1%) Phosphoglucose isomerase, SIS domain 2 (20.1%)" QFDALLQEQSAQR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "1.8.1.2 (88.9%) 1.6.2.4 (11.1%)" "assimilatory sulfite reductase (NADPH) (88.9%) NADPH--hemoprotein reductase (11.1%)" "GO:0009086 (8.2%) GO:0050667 (8.2%)" GO:0005829 (20.8%) "GO:0010181 (21%) GO:0050660 (20.8%) GO:0016491 (12.2%)" "methionine biosynthetic process (8.2%) homocysteine metabolic process (8.2%)" cytosol (20.8%) "FMN binding (21%) flavin adenine dinucleotide binding (20.8%) oxidoreductase activity (12.2%)" "IPR029039 (33.5%) IPR008254 (33.4%) IPR001094 (33%)" "Flavoprotein-like superfamily (33.5%) Flavodoxin/nitric oxide synthase (33.4%) Flavodoxin-like (33%)" AVLENCPTLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (58.9%) IPR019734 (41.1%)" "Tetratricopeptide-like helical domain superfamily (58.9%) Tetratricopeptide repeat (41.1%)" FLFHCIDLTTLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (25%) GO:0016052 (25%)" GO:0005737 (25%) GO:0004139 (25%) "deoxyribonucleotide catabolic process (25%) carbohydrate catabolic process (25%)" cytoplasm (25%) deoxyribose-phosphate aldolase activity (25%) "IPR013785 (34.1%) IPR002915 (32.9%) IPR011343 (32.9%)" "Aldolase-type TIM barrel (34.1%) DeoC/FbaB/LacD aldolase (32.9%) Deoxyribose-phosphate aldolase (32.9%)" FLYSDHEIFLR root "GO:0006457 (0%) GO:0006974 (0%) GO:0009408 (0%)" "GO:0005737 (1.1%) GO:0005829 (0%)" "GO:0005524 (24.6%) GO:0016887 (24.6%) GO:0051082 (24.6%)" "protein folding (0%) DNA damage response (0%) response to heat (0%)" "cytoplasm (1.1%) cytosol (0%)" "ATP binding (24.6%) ATP hydrolysis activity (24.6%) unfolded protein binding (24.6%)" "IPR001404 (16.8%) IPR020575 (16.8%) IPR036890 (16.8%)" "Heat shock protein Hsp90 family (16.8%) Heat shock protein Hsp90, N-terminal (16.8%) Histidine kinase/HSP90-like ATPase superfamily (16.8%)" KASYLDTGTWASNAIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20.2%) GO:0008615 (19.3%)" GO:0005737 (20.2%) "GO:0004648 (20.2%) GO:0030170 (20.2%)" "L-serine biosynthetic process (20.2%) pyridoxine biosynthetic process (19.3%)" cytoplasm (20.2%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20.2%) pyridoxal phosphate binding (20.2%)" "IPR000192 (17.2%) IPR015421 (17.2%) IPR015422 (17.2%)" "Aminotransferase class V domain (17.2%) Pyridoxal phosphate-dependent transferase, major domain (17.2%) Pyridoxal phosphate-dependent transferase, small domain (17.2%)" TSKKDEAYVLGLQIGSQMAGPQAIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" IFGPDETASNR root "4.1.2.- (88.4%) 4.1.2.22 (6.6%) 4.1.2.9 (5%)" "Aldehyde-lyases (88.4%) fructose-6-phosphate phosphoketolase (6.6%) phosphoketolase (5%)" GO:0005975 (36.6%) "GO:0016832 (34.8%) GO:0000287 (25.5%) GO:0047905 (1.8%)" carbohydrate metabolic process (36.6%) "aldehyde-lyase activity (34.8%) magnesium ion binding (25.5%) fructose-6-phosphate phosphoketolase activity (1.8%)" "IPR005593 (13.4%) IPR029061 (13.3%) IPR018970 (12.6%)" "Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase (13.4%) Thiamin diphosphate-binding fold (13.3%) Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal (12.6%)" AICDANPGLSAENFR Pseudomonadati Bacteria Pseudomonadati 3.2.-.- (100%) Glycosylases (100%) "GO:0008932 (96.6%) GO:0016798 (3.4%)" "lytic endotransglycosylase activity (96.6%) hydrolase activity, acting on glycosyl bonds (3.4%)" "IPR018392 (33.5%) IPR036779 (33.5%) IPR028082 (33%)" "LysM domain (33.5%) LysM domain superfamily (33.5%) Periplasmic binding protein-like I (33%)" EQVEDEANVLNIVSHLRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.2%) GO:0006879 (14.2%)" "GO:0005829 (14.2%) GO:0005737 (0.5%)" "GO:0004322 (14.2%) GO:0008198 (14.2%) GO:0008199 (14.2%)" "iron ion transport (14.2%) intracellular iron ion homeostasis (14.2%)" "cytosol (14.2%) cytoplasm (0.5%)" "ferroxidase activity (14.2%) ferrous iron binding (14.2%) ferric iron binding (14.2%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" GTHTAGQTGNAMLTDLETR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" MDADVPLVVPEVNAADAKDRPR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000534 (18.4%) IPR005986 (18.4%) IPR012080 (18.4%)" "Semialdehyde dehydrogenase, NAD-binding (18.4%) Aspartate-semialdehyde dehydrogenase, beta-type (18.4%) Aspartate-semialdehyde dehydrogenase (18.4%)" AASVNMPYVIER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33%) "GO:0022627 (32.7%) GO:0005840 (1.2%)" GO:0003735 (33%) translation (33%) "cytosolic small ribosomal subunit (32.7%) ribosome (1.2%)" structural constituent of ribosome (33%) "IPR001865 (25.2%) IPR023591 (25.2%) IPR005706 (24.9%)" "Small ribosomal subunit protein uS2 (25.2%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.2%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (24.9%)" KAPGVIYRQPVNQPLQTGLK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "7.1.2.2 (98.3%) 3.6.3.14 (1.7%)" "H(+)-transporting two-sector ATPase (98.3%) Transferred entry: 7.1.2.2 (1.7%)" GO:0015986 (0.3%) "GO:0045259 (18.3%) GO:0005886 (17.4%)" "GO:0005524 (18.3%) GO:0043531 (18.3%) GO:0046933 (18.3%)" proton motive force-driven ATP synthesis (0.3%) "proton-transporting ATP synthase complex (18.3%) plasma membrane (17.4%)" "ATP binding (18.3%) ADP binding (18.3%) proton-transporting ATP synthase activity, rotational mechanism (18.3%)" "IPR000194 (10.1%) IPR004100 (10.1%) IPR005294 (10.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.1%) ATP synthase, F1 complex, alpha subunit (10.1%)" GVGYCATCDAPLYR Clostridia Bacteria Bacillati Bacillota Clostridia 1.8.1.9 (100%) thioredoxin-disulfide reductase (NADPH) (100%) "GO:0016491 (69.8%) GO:0004791 (30.2%)" "oxidoreductase activity (69.8%) thioredoxin-disulfide reductase (NADPH) activity (30.2%)" "IPR023753 (33.3%) IPR036188 (33.3%) IPR050097 (33.3%)" "FAD/NAD(P)-binding domain (33.3%) FAD/NAD(P)-binding domain superfamily (33.3%) Ferredoxin--NADP reductase type 2 (33.3%)" SDGTTILGGDDKAGVTAILEALR TLAAASSLGMTEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.5%)" "GO:0003735 (24.9%) GO:0008097 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.5%)" "structural constituent of ribosome (24.9%) 5S rRNA binding (24.9%)" "IPR004389 (33.8%) IPR005484 (33.8%) IPR057268 (32.4%)" "Large ribosomal subunit protein uL18, bacteria (33.8%) Large ribosomal subunit protein uL18, bacterial/plantae/animalia (33.8%) Large ribosomal subunit protein uL18 (32.4%)" TVGEQLYNQFGIGLAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.5%) GO:0006508 (3.3%)" GO:0000428 (19.5%) "GO:0003677 (19.5%) GO:0003899 (19.5%) GO:0032549 (15.4%)" "DNA-templated transcription (19.5%) proteolysis (3.3%)" DNA-directed RNA polymerase complex (19.5%) "DNA binding (19.5%) DNA-directed RNA polymerase activity (19.5%) ribonucleoside binding (15.4%)" "IPR007645 (9.5%) IPR007120 (7.5%) IPR007121 (7.5%)" "RNA polymerase Rpb2, domain 3 (9.5%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.5%) RNA polymerase, beta subunit, conserved site (7.5%)" ITELFGEMPALYIADGHHR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR008323 (100%) Uncharacterised conserved protein UCP033563 (100%) IEEYFPVKDENADHDPMLQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.1%) GO:0006164 (1%)" GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (19.6%)" "'de novo' IMP biosynthetic process (19.1%) purine nucleotide biosynthetic process (1%)" cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (19.6%)" "IPR036604 (11.3%) IPR036921 (11.3%) IPR041609 (11.3%)" "Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily (11.3%) PurM-like, N-terminal domain superfamily (11.3%) Phosphoribosylformylglycinamidine synthase, linker domain (11.3%)" NVGETPNGYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006355 (0.5%) "GO:0003700 (49.7%) GO:0043565 (49.2%) GO:0000976 (0.5%)" regulation of DNA-templated transcription (0.5%) "DNA-binding transcription factor activity (49.7%) sequence-specific DNA binding (49.2%) transcription cis-regulatory region binding (0.5%)" "IPR018060 (50.3%) IPR009057 (49.7%)" "AraC-like, DNA binding HTH domain (50.3%) Homedomain-like superfamily (49.7%)" VGDTKIELLEPTCPESTIAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (47.7%) "GO:0004493 (47.7%) GO:0016829 (2.3%) GO:0051213 (2.3%)" L-methylmalonyl-CoA metabolic process (47.7%) "methylmalonyl-CoA epimerase activity (47.7%) lyase activity (2.3%) dioxygenase activity (2.3%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" AGDDAAGLAVSEK root "GO:0005576 (26.2%) GO:0009288 (26.2%) GO:0055040 (4.8%)" "GO:0005198 (33.3%) GO:0005524 (2.4%) GO:0016887 (2.4%)" "extracellular region (26.2%) bacterial-type flagellum (26.2%) periplasmic flagellum (4.8%)" "structural molecule activity (33.3%) ATP binding (2.4%) ATP hydrolysis activity (2.4%)" "IPR001029 (23.7%) IPR046358 (23.7%) IPR001492 (22%)" "Flagellin, N-terminal domain (23.7%) Flagellin, C-terminal domain (23.7%) Flagellin (22%)" YDNADNKRPGFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%) GO:0016874 (0.1%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%) ligase activity (0.1%)" "IPR004154 (11.2%) IPR004499 (11.2%) IPR036621 (11.2%)" "Anticodon-binding (11.2%) Proline-tRNA ligase, class IIa, archaeal-type (11.2%) Anticodon-binding domain superfamily (11.2%)" VAVIGSGPAGLSFAGDMAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.4.1.13 (81.4%) 1.4.1.14 (18.6%)" "glutamate synthase (NADPH) (81.4%) glutamate synthase (NADH) (18.6%)" "GO:0051536 (48.2%) GO:0016491 (35.5%) GO:0004355 (13.1%)" "iron-sulfur cluster binding (48.2%) oxidoreductase activity (35.5%) glutamate synthase (NADPH) activity (13.1%)" "IPR009051 (10.7%) IPR028261 (10.7%) IPR036188 (10.7%)" "Alpha-helical ferredoxin (10.7%) Dihydroprymidine dehydrogenase domain II (10.7%) FAD/NAD(P)-binding domain superfamily (10.7%)" RTTPSIVAFVDGGER Pseudomonadati Bacteria Pseudomonadati GO:0005737 (3.6%) "GO:0005524 (32.2%) GO:0140662 (32.2%) GO:0051082 (31.9%)" cytoplasm (3.6%) "ATP binding (32.2%) ATP-dependent protein folding chaperone (32.2%) unfolded protein binding (31.9%)" "IPR013126 (16.8%) IPR018181 (16.8%) IPR043129 (16.8%)" "Heat shock protein 70 family (16.8%) Heat shock protein 70, conserved site (16.8%) ATPase, nucleotide binding domain (16.8%)" GVSFEIEHVEKDNPPQDLIDLNPNQSVPTLVDR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (0.2%) GO:0006950 (0.2%) GO:0042594 (0.2%)" "GO:0005737 (97.2%) GO:0005829 (0.2%) GO:0005840 (0.2%)" "GO:0016740 (0.6%) GO:0004364 (0.4%) GO:0003735 (0.2%)" "translation (0.2%) response to stress (0.2%) response to starvation (0.2%)" "cytoplasm (97.2%) cytosol (0.2%) ribosome (0.2%)" "transferase activity (0.6%) glutathione transferase activity (0.4%) structural constituent of ribosome (0.2%)" "IPR004045 (11.2%) IPR036249 (11.2%) IPR040079 (11.2%)" "Glutathione S-transferase, N-terminal (11.2%) Thioredoxin-like superfamily (11.2%) Glutathione transferase family (11.2%)" IYQTPDDFSER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" SGETEDATIADLAVGTAAGQIK root "4.2.1.11 (99.9%) 6.3.4.2 (0.1%)" "phosphopyruvate hydratase (99.9%) CTP synthase (glutamine hydrolyzing) (0.1%)" "GO:0006096 (16.7%) GO:0019856 (0%) GO:0044210 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.1%)" "glycolytic process (16.7%) pyrimidine nucleobase biosynthetic process (0%) 'de novo' CTP biosynthetic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.1%)" "IPR000941 (16.8%) IPR020810 (16.8%) IPR036849 (16.8%)" "Enolase (16.8%) Enolase, C-terminal TIM barrel domain (16.8%) Enolase-like, C-terminal domain superfamily (16.8%)" TGELSIHCTELR root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.4%) GO:0006418 (0%) GO:0034605 (0%)" "GO:0005829 (14.4%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0000049 (14.4%) GO:0004824 (14.4%) GO:0005524 (14.4%)" "lysyl-tRNA aminoacylation (14.4%) tRNA aminoacylation for protein translation (0%) cellular response to heat (0%)" "cytosol (14.4%) cytoplasm (0%) membrane (0%)" "tRNA binding (14.4%) lysine-tRNA ligase activity (14.4%) ATP binding (14.4%)" "IPR044136 (11.3%) IPR012340 (11.3%) IPR004365 (11.2%)" "Lysine-tRNA ligase, class II, N-terminal (11.3%) Nucleic acid-binding, OB-fold (11.3%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.2%)" VVMGEKEGTLITE root "2.7.4.22 (99.8%) 2.7.4.- (0.2%)" "UMP kinase (99.8%) Phosphotransferases with a phosphate group as acceptor (0.2%)" "GO:0006225 (20%) GO:0044210 (19.6%) GO:0006221 (0%)" GO:0005829 (20%) "GO:0033862 (20%) GO:0005524 (20%) GO:0016301 (0.4%)" "UDP biosynthetic process (20%) 'de novo' CTP biosynthetic process (19.6%) pyrimidine nucleotide biosynthetic process (0%)" cytosol (20%) "UMP kinase activity (20%) ATP binding (20%) kinase activity (0.4%)" "IPR036393 (25.4%) IPR001048 (25.1%) IPR015963 (24.8%)" "Acetylglutamate kinase-like superfamily (25.4%) Aspartate/glutamate/uridylate kinase (25.1%) Uridylate kinase, bacteria (24.8%)" DIQPDMTSYDYDAPISEAGWVTPK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) GO:0004565 (50%) carbohydrate metabolic process (50%) beta-galactosidase activity (50%) "IPR001944 (12.5%) IPR008979 (12.5%) IPR017853 (12.5%)" "Glycoside hydrolase, family 35 (12.5%) Galactose-binding-like domain superfamily (12.5%) Glycoside hydrolase superfamily (12.5%)" KAAYLNTGVWAK Pseudomonadati Bacteria Pseudomonadati 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20.1%) GO:0008615 (19.2%)" "GO:0005737 (20.1%) GO:0016020 (0.2%)" "GO:0004648 (20.1%) GO:0030170 (20.1%) GO:0008483 (0.3%)" "L-serine biosynthetic process (20.1%) pyridoxine biosynthetic process (19.2%)" "cytoplasm (20.1%) membrane (0.2%)" "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20.1%) pyridoxal phosphate binding (20.1%) transaminase activity (0.3%)" "IPR022278 (19.7%) IPR000192 (19.5%) IPR015421 (19.5%)" "Phosphoserine aminotransferase (19.7%) Aminotransferase class V domain (19.5%) Pyridoxal phosphate-dependent transferase, major domain (19.5%)" ANAVVMATGGAGR root "1.3.5.1 (96%) 1.3.5.4 (2.9%) 1.3.99.1 (0.8%)" "succinate dehydrogenase (96%) Transferred entry: 1.3.5.1 (2.9%) Deleted entry (0.8%)" "GO:0006113 (14.3%) GO:0009061 (14.3%) GO:0022900 (13.9%)" "GO:0005886 (14.3%) GO:0045283 (0%) GO:0005829 (0%)" "GO:0009055 (14.3%) GO:0050660 (14.3%) GO:0000104 (10.6%)" "fermentation (14.3%) anaerobic respiration (14.3%) electron transport chain (13.9%)" "plasma membrane (14.3%) fumarate reductase complex (0%) cytosol (0%)" "electron transfer activity (14.3%) flavin adenine dinucleotide binding (14.3%) succinate dehydrogenase activity (10.6%)" "IPR003953 (11.1%) IPR030664 (11.1%) IPR036188 (11.1%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (11.1%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (11.1%) FAD/NAD(P)-binding domain superfamily (11.1%)" IVEGQTDKCSIYAVLYEESLDSKGNNIPLTGDYK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR024311 (25%) IPR025112 (25%) IPR032186 (25%)" "Lipocalin-like domain (25%) Putative carbohydrate metabolism domain (25%) Domain of unknown function DUF5018 (25%)" ITIVAQQNEYNNKLEDTSTIEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR038179 (100%) NigD-like, N-terminal domain superfamily (100%) DADTLLEVSETSKR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 6.3.2.1 (100%) pantoate--beta-alanine ligase (AMP-forming) (100%) GO:0015940 (24.7%) GO:0005829 (24.4%) "GO:0004592 (25%) GO:0005524 (24.4%) GO:0016874 (0.9%)" pantothenate biosynthetic process (24.7%) cytosol (24.4%) "pantoate-beta-alanine ligase activity (25%) ATP binding (24.4%) ligase activity (0.9%)" "IPR003721 (25.6%) IPR014729 (25.3%) IPR042176 (25.3%)" "Pantoate-beta-alanine ligase (25.6%) Rossmann-like alpha/beta/alpha sandwich fold (25.3%) Pantoate-beta-alanine ligase, C-terminal domain (25.3%)" LGLPIFVKPNDGGSSFGVTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.2.4 (100%) D-alanine--D-alanine ligase (100%) "GO:0008360 (14.3%) GO:0009252 (14.3%) GO:0071555 (14.3%)" GO:0005737 (14.3%) "GO:0005524 (14.3%) GO:0008716 (14.3%) GO:0046872 (14.3%)" "regulation of cell shape (14.3%) peptidoglycan biosynthetic process (14.3%) cell wall organization (14.3%)" cytoplasm (14.3%) "ATP binding (14.3%) D-alanine-D-alanine ligase activity (14.3%) metal ion binding (14.3%)" "IPR000291 (14.3%) IPR005905 (14.3%) IPR011095 (14.3%)" "D-alanine--D-alanine ligase/VANA/B/C, conserved site (14.3%) D-alanine--D-alanine ligase (14.3%) D-alanine--D-alanine ligase, C-terminal (14.3%)" SLRDIISAVIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" RGQESGRADDNEETIKKR Bacteria Bacteria "2.7.4.3 (95.2%) 2.7.4.- (4.8%)" "adenylate kinase (95.2%) Phosphotransferases with a phosphate group as acceptor (4.8%)" "GO:0044209 (23.9%) GO:0006139 (1%)" GO:0005737 (23.9%) "GO:0005524 (25.4%) GO:0004017 (24.4%) GO:0019205 (1%)" "AMP salvage (23.9%) nucleobase-containing compound metabolic process (1%)" cytoplasm (23.9%) "ATP binding (25.4%) AMP kinase activity (24.4%) nucleobase-containing compound kinase activity (1%)" "IPR000850 (30%) IPR027417 (30%) IPR033690 (30%)" "Adenylate kinase/UMP-CMP kinase (30%) P-loop containing nucleoside triphosphate hydrolase (30%) Adenylate kinase, conserved site (30%)" SIYNGNIVAGYIPGAEPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.103 (50%) 4.2.1.47 (50%)" "L-threonine 3-dehydrogenase (50%) GDP-mannose 4,6-dehydratase (50%)" GO:0006567 (48.6%) "GO:0008743 (48.6%) GO:0016829 (2.7%)" L-threonine catabolic process (48.6%) "L-threonine 3-dehydrogenase activity (48.6%) lyase activity (2.7%)" "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" VTQPAIFLHSVILAK root 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0006633 (32.1%) "GO:0005829 (32.1%) GO:0005835 (0.2%)" "GO:0004314 (35.1%) GO:0004312 (0.2%) GO:0016740 (0.1%)" fatty acid biosynthetic process (32.1%) "cytosol (32.1%) fatty acid synthase complex (0.2%)" "[acyl-carrier-protein] S-malonyltransferase activity (35.1%) fatty acid synthase activity (0.2%) transferase activity (0.1%)" "IPR014043 (14.4%) IPR001227 (14.3%) IPR004410 (14.3%)" "Acyl transferase domain (14.4%) Acyl transferase domain superfamily (14.3%) Malonyl CoA-acyl carrier protein transacylase, FabD-type (14.3%)" TLQSIQITLLSRLGK GPLTTPVGGGIR root "1.1.1.42 (100%) 1.1.1.- (0%) 1.1.1.41 (0%)" "isocitrate dehydrogenase (NADP(+)) (100%) With NAD(+) or NADP(+) as acceptor (0%) isocitrate dehydrogenase (NAD(+)) (0%)" "GO:0006099 (20.5%) GO:0006097 (19.1%) GO:0006508 (0%)" "GO:0005737 (0%) GO:0005576 (0%) GO:0005759 (0%)" "GO:0004450 (20.5%) GO:0000287 (19.1%) GO:0051287 (19.1%)" "tricarboxylic acid cycle (20.5%) glyoxylate cycle (19.1%) proteolysis (0%)" "cytoplasm (0%) extracellular region (0%) mitochondrial matrix (0%)" "isocitrate dehydrogenase (NADP+) activity (20.5%) magnesium ion binding (19.1%) NAD binding (19.1%)" "IPR004439 (34%) IPR024084 (34%) IPR019818 (31.7%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (34%) Isopropylmalate dehydrogenase-like domain (34%) Isocitrate/isopropylmalate dehydrogenase, conserved site (31.7%)" LALANGLTPIFCIGEVLEER Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%) GO:0019563 (16.5%)" "GO:0005829 (16.5%) GO:0016020 (0.5%)" "GO:0004807 (16.5%) GO:0016853 (0.1%)" "gluconeogenesis (16.5%) glycolytic process (16.5%) glycerol catabolic process (16.5%)" "cytosol (16.5%) membrane (0.5%)" "triose-phosphate isomerase activity (16.5%) isomerase activity (0.1%)" "IPR000652 (19.9%) IPR013785 (19.9%) IPR020861 (19.9%)" "Triosephosphate isomerase (19.9%) Aldolase-type TIM barrel (19.9%) Triosephosphate isomerase, active site (19.9%)" FGDNFPLLIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (32.5%) "GO:0004476 (33.8%) GO:0008270 (33.8%)" carbohydrate metabolic process (32.5%) "mannose-6-phosphate isomerase activity (33.8%) zinc ion binding (33.8%)" "IPR011051 (17%) IPR014710 (17%) IPR046457 (17%)" "RmlC-like cupin domain superfamily (17%) RmlC-like jelly roll fold (17%) Phosphomannose isomerase type I, catalytic domain (17%)" LFIVTGDSEAPKVHESFPAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" HLALLPYVTDLMK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) GO:0022627 (25%) "GO:0003735 (25%) GO:0070181 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "structural constituent of ribosome (25%) small ribosomal subunit rRNA binding (25%)" "IPR001648 (33.5%) IPR036870 (33.5%) IPR018275 (33.1%)" "Small ribosomal subunit protein bS18 (33.5%) Small ribosomal subunit protein bS18 superfamily (33.5%) Small ribosomal subunit protein bS18, conserved site (33.1%)" CAFEVGAMDLGMGVTYLGPTGSQMGKK Bacillati Bacteria Bacillati 2.1.3.3 (100%) ornithine carbamoyltransferase (100%) "GO:0019240 (20%) GO:0042450 (20%)" GO:0005737 (20%) "GO:0004585 (20%) GO:0016597 (20%)" "citrulline biosynthetic process (20%) L-arginine biosynthetic process via ornithine (20%)" cytoplasm (20%) "ornithine carbamoyltransferase activity (20%) amino acid binding (20%)" "IPR002292 (16.7%) IPR006130 (16.7%) IPR006131 (16.7%)" "Ornithine/putrescine carbamoyltransferase (16.7%) Aspartate/ornithine carbamoyltransferase (16.7%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (16.7%)" GNFSFQVEEVTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.3%) GO:0043335 (16.3%) GO:0051083 (16.3%)" "GO:0003755 (16.3%) GO:0043022 (16.3%) GO:0044183 (16.3%)" "protein transport (16.3%) protein unfolding (16.3%) 'de novo' cotranslational protein folding (16.3%)" "peptidyl-prolyl cis-trans isomerase activity (16.3%) ribosome binding (16.3%) protein folding chaperone (16.3%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" IDMEAAGEAPANKGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.1%) "GO:0022627 (32.3%) GO:0005840 (1.5%)" GO:0003735 (33.1%) translation (33.1%) "cytosolic small ribosomal subunit (32.3%) ribosome (1.5%)" structural constituent of ribosome (33.1%) "IPR001865 (25.3%) IPR023591 (25.3%) IPR005706 (24.7%)" "Small ribosomal subunit protein uS2 (25.3%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.3%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (24.7%)" DAQVEQVTDNNGLAAVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (20%) IPR006665 (20%) IPR036737 (20%)" "Outer membrane protein, bacterial (20%) OmpA-like domain (20%) OmpA-like domain superfamily (20%)" KLIDDAVAWAK root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (24.9%) GO:0006098 (24.5%) GO:0009052 (0.4%)" "GO:0005829 (24.6%) GO:0005737 (0.3%) GO:0016020 (0.1%)" "GO:0004801 (24.9%) GO:0016740 (0.2%) GO:0016744 (0.1%)" "carbohydrate metabolic process (24.9%) pentose-phosphate shunt (24.5%) pentose-phosphate shunt, non-oxidative branch (0.4%)" "cytosol (24.6%) cytoplasm (0.3%) membrane (0.1%)" "transaldolase activity (24.9%) transferase activity (0.2%) transketolase or transaldolase activity (0.1%)" "IPR001585 (25.2%) IPR013785 (25.2%) IPR018225 (25.2%)" "Transaldolase/Fructose-6-phosphate aldolase (25.2%) Aldolase-type TIM barrel (25.2%) Transaldolase, active site (25.2%)" FIIADTPGHEQYTR root "2.7.7.4 (90.5%) 2.7.1.25 (9.5%)" "sulfate adenylyltransferase (90.5%) adenylyl-sulfate kinase (9.5%)" "GO:0000103 (13.3%) GO:0070814 (13.3%) GO:0006790 (2.7%)" "GO:0016020 (0.1%) GO:0005789 (0%) GO:0005829 (0%)" "GO:0003924 (16.1%) GO:0005525 (16.1%) GO:0005524 (15.9%)" "sulfate assimilation (13.3%) hydrogen sulfide biosynthetic process (13.3%) sulfur compound metabolic process (2.7%)" "membrane (0.1%) endoplasmic reticulum membrane (0%) cytosol (0%)" "GTPase activity (16.1%) GTP binding (16.1%) ATP binding (15.9%)" "IPR000795 (8.3%) IPR050100 (8.3%) IPR027417 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation factor GTPase superfamily members (8.3%) P-loop containing nucleoside triphosphate hydrolase (8.3%)" DSGAVELPITNMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.115 (100%) UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (100%) GO:0016829 (100%) lyase activity (100%) "IPR003869 (25%) IPR020025 (25%) IPR036291 (25%)" "Polysaccharide biosynthesis protein, CapD-like domain (25%) UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (25%) NAD(P)-binding domain superfamily (25%)" AIAEQLKYTGNKDAAAAVGK root "GO:0006412 (24.7%) GO:0002181 (0.1%)" "GO:0022625 (24.8%) GO:0005840 (0.6%) GO:0005737 (0.1%)" "GO:0003735 (24.8%) GO:0008097 (24.8%) GO:0019843 (0.1%)" "translation (24.7%) cytoplasmic translation (0.1%)" "cytosolic large ribosomal subunit (24.8%) ribosome (0.6%) cytoplasm (0.1%)" "structural constituent of ribosome (24.8%) 5S rRNA binding (24.8%) rRNA binding (0.1%)" "IPR004389 (34.2%) IPR005484 (34.2%) IPR057268 (31%)" "Large ribosomal subunit protein uL18, bacteria (34.2%) Large ribosomal subunit protein uL18, bacterial/plantae/animalia (34.2%) Large ribosomal subunit protein uL18 (31%)" HHHLIPMNEEAIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0016903 (96.2%) GO:0019164 (3.8%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (96.2%) pyruvate synthase activity (3.8%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" YKVVKGDNNTPR Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.3.1.74 (100%) 2-alkenal reductase [NAD(P)(+)] (100%) "GO:0042026 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (5.1%) GO:0070013 (0.1%)" "GO:0005524 (31.5%) GO:0140662 (31.5%) GO:0051082 (30.9%)" "protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (5.1%) intracellular organelle lumen (0.1%)" "ATP binding (31.5%) ATP-dependent protein folding chaperone (31.5%) unfolded protein binding (30.9%)" "IPR013126 (16.9%) IPR018181 (16.9%) IPR043129 (16.8%)" "Heat shock protein 70 family (16.9%) Heat shock protein 70, conserved site (16.9%) ATPase, nucleotide binding domain (16.8%)" LQSFADLITIEEYKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.1.3.11 (87.4%) 2.1.3.9 (12.6%)" "N-succinylornithine carbamoyltransferase (87.4%) N-acetylornithine carbamoyltransferase (12.6%)" "GO:0019240 (24.3%) GO:0042450 (24.3%) GO:0006526 (0.3%)" "GO:0004585 (24.3%) GO:0016597 (24.3%) GO:0043857 (2.4%)" "citrulline biosynthetic process (24.3%) L-arginine biosynthetic process via ornithine (24.3%) L-arginine biosynthetic process (0.3%)" "ornithine carbamoyltransferase activity (24.3%) amino acid binding (24.3%) N-acetylornithine carbamoyltransferase activity (2.4%)" "IPR036901 (20.2%) IPR006132 (20.1%) IPR006130 (20%)" "Aspartate/ornithine carbamoyltransferase superfamily (20.2%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20.1%) Aspartate/ornithine carbamoyltransferase (20%)" VICQGFTGSQGTFHSEQAIAYGTK Bacteria Bacteria 6.2.1.5 (100%) succinate--CoA ligase (ADP-forming) (100%) "GO:0006099 (20%) GO:0009142 (0%)" "GO:0009361 (19.9%) GO:0042709 (0.1%) GO:0005737 (0%)" "GO:0004775 (20%) GO:0004776 (19.9%) GO:0000166 (19.8%)" "tricarboxylic acid cycle (20%) nucleoside triphosphate biosynthetic process (0%)" "succinate-CoA ligase complex (ADP-forming) (19.9%) succinate-CoA ligase complex (0.1%) cytoplasm (0%)" "succinate-CoA ligase (ADP-forming) activity (20%) succinate-CoA ligase (GDP-forming) activity (19.9%) nucleotide binding (19.8%)" "IPR003781 (14.5%) IPR036291 (14.5%) IPR016102 (14.3%)" "CoA-binding (14.5%) NAD(P)-binding domain superfamily (14.5%) Succinyl-CoA synthetase-like (14.3%)" GTLEDPNLFIRR root "GO:0006457 (0.1%) GO:0006974 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (18.4%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0005524 (20%) GO:0016887 (20%) GO:0051082 (20%)" "protein folding (0.1%) DNA damage response (0.1%) response to heat (0.1%)" "cytoplasm (18.4%) cytosol (0.1%) plasma membrane (0.1%)" "ATP binding (20%) ATP hydrolysis activity (20%) unfolded protein binding (20%)" "IPR037196 (15.6%) IPR001404 (15.3%) IPR020568 (14.9%)" "HSP90, C-terminal domain (15.6%) Heat shock protein Hsp90 family (15.3%) Ribosomal protein uS5 domain 2-type superfamily (14.9%)" VYDVVISDGSRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (15.6%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (15.6%)" "IPR000705 (9.8%) IPR006203 (9.8%) IPR006204 (9.8%)" "Galactokinase (9.8%) GHMP kinase, ATP-binding, conserved site (9.8%) GHMP kinase N-terminal domain (9.8%)" MIAAGFDIKPTQSAICAVMLYDAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.29 (99%) 2.3.1.50 (1%)" "glycine C-acetyltransferase (99%) serine C-palmitoyltransferase (1%)" "GO:0030148 (13.6%) GO:0019518 (13.4%) GO:0006567 (0.9%)" "GO:0005829 (14.5%) GO:0016020 (13.6%)" "GO:0008890 (14.5%) GO:0030170 (14.5%) GO:0004758 (8.3%)" "sphingolipid biosynthetic process (13.6%) L-threonine catabolic process to glycine (13.4%) L-threonine catabolic process (0.9%)" "cytosol (14.5%) membrane (13.6%)" "glycine C-acetyltransferase activity (14.5%) pyridoxal phosphate binding (14.5%) serine C-palmitoyltransferase activity (8.3%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" IIPDILGGDPEYCNIMHADGAGTK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.3.1 (100%) phosphoribosylformylglycinamidine cyclo-ligase (100%) "GO:0006189 (16.6%) GO:0046084 (16.6%) GO:0006164 (0.1%)" GO:0005829 (16.6%) "GO:0004637 (16.6%) GO:0004641 (16.6%) GO:0005524 (16.6%)" "'de novo' IMP biosynthetic process (16.6%) adenine biosynthetic process (16.6%) purine nucleotide biosynthetic process (0.1%)" cytosol (16.6%) "phosphoribosylamine-glycine ligase activity (16.6%) phosphoribosylformylglycinamidine cyclo-ligase activity (16.6%) ATP binding (16.6%)" "IPR036921 (20.1%) IPR004733 (20%) IPR010918 (20%)" "PurM-like, N-terminal domain superfamily (20.1%) Phosphoribosylformylglycinamidine cyclo-ligase (20%) PurM-like, C-terminal domain (20%)" SKVAGEDIQVSAPTTAKQPANQPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0000917 (14.3%) GO:0043093 (14.3%) GO:0051258 (14.3%)" "GO:0005737 (14.3%) GO:0032153 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%)" "division septum assembly (14.3%) FtsZ-dependent cytokinesis (14.3%) protein polymerization (14.3%)" "cytoplasm (14.3%) cell division site (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" LNVGINTVVEFLHR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.3%) IPR000795 (8.3%) IPR004161 (8.3%)" "Translation initiation factor IF-2, bacterial-like (8.3%) Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" RIGHTVEREDTPAIR Pseudomonadati Bacteria Pseudomonadati "GO:0006412 (32%) GO:0000027 (0.2%) GO:0002181 (0.2%)" "GO:0022625 (31.6%) GO:0005840 (2.8%) GO:0015934 (0.7%)" GO:0003735 (32.3%) "translation (32%) ribosomal large subunit assembly (0.2%) cytoplasmic translation (0.2%)" "cytosolic large ribosomal subunit (31.6%) ribosome (2.8%) large ribosomal subunit (0.7%)" structural constituent of ribosome (32.3%) "IPR005996 (25%) IPR016082 (25%) IPR036919 (25%)" "Large ribosomal subunit protein uL30, bacteria (25%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (25%) Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily (25%)" NISAVYSDLAETILPQLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (58.7%) IPR019734 (39.1%) IPR036737 (2.2%)" "Tetratricopeptide-like helical domain superfamily (58.7%) Tetratricopeptide repeat (39.1%) OmpA-like domain superfamily (2.2%)" IGEVTSGTMSPMR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (15.3%) GO:0032259 (11.3%)" "GO:0005829 (15.3%) GO:0005960 (15.3%)" "GO:0004047 (15.3%) GO:0008483 (15.3%) GO:0008168 (11.3%)" "glycine decarboxylation via glycine cleavage system (15.3%) methylation (11.3%)" "cytosol (15.3%) glycine cleavage complex (15.3%)" "aminomethyltransferase activity (15.3%) transaminase activity (15.3%) methyltransferase activity (11.3%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" HTGWVEILGCGMVDPNVLDANGIDSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002319 (14.4%) IPR004188 (14.4%) IPR006195 (14.4%)" "Phenylalanyl-tRNA synthetase (14.4%) Phenylalanine-tRNA ligase, class II, N-terminal (14.4%) Aminoacyl-tRNA synthetase, class II (14.4%)" KMATIDKLTNDGTYSNLSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.2%) "GO:0022627 (32.8%) GO:0005840 (0.8%)" GO:0003735 (33.2%) translation (33.2%) "cytosolic small ribosomal subunit (32.8%) ribosome (0.8%)" structural constituent of ribosome (33.2%) "IPR001865 (25.2%) IPR023591 (25.2%) IPR005706 (24.9%)" "Small ribosomal subunit protein uS2 (25.2%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.2%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (24.9%)" IKSYGGIDLFMGGIGPDGHIAFNEPGSSLSSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.2%) GO:0006043 (14.2%) GO:0006046 (14.2%)" "GO:0005829 (13.8%) GO:0005737 (0.5%)" "GO:0004342 (14.2%) GO:0042802 (14.2%) GO:0016787 (0.2%)" "carbohydrate metabolic process (14.2%) glucosamine catabolic process (14.2%) N-acetylglucosamine catabolic process (14.2%)" "cytosol (13.8%) cytoplasm (0.5%)" "glucosamine-6-phosphate deaminase activity (14.2%) identical protein binding (14.2%) hydrolase activity (0.2%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" LTQGVSALNDDQLTQVKDQVWQSYVNNQLIAAEAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (61.3%) "GO:0016853 (35.5%) GO:0003755 (3.2%)" plasma membrane (61.3%) "isomerase activity (35.5%) peptidyl-prolyl cis-trans isomerase activity (3.2%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" QMDQHNLILVTAITPTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.3 (100%) formate--tetrahydrofolate ligase (100%) GO:0035999 (33.3%) "GO:0004329 (33.3%) GO:0005524 (33.3%)" tetrahydrofolate interconversion (33.3%) "formate-tetrahydrofolate ligase activity (33.3%) ATP binding (33.3%)" "IPR000559 (33.3%) IPR020628 (33.3%) IPR027417 (33.3%)" "Formate-tetrahydrofolate ligase, FTHFS (33.3%) Formate-tetrahydrofolate ligase, FTHFS, conserved site (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" TSHVEYQTANR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0070125 (0.2%) "GO:0005829 (15.6%) GO:0032045 (10.9%) GO:0005739 (0.2%)" "GO:0003746 (15.8%) GO:0003924 (15.8%) GO:0005525 (15.8%)" mitochondrial translational elongation (0.2%) "cytosol (15.6%) guanyl-nucleotide exchange factor complex (10.9%) mitochondrion (0.2%)" "translation elongation factor activity (15.8%) GTPase activity (15.8%) GTP binding (15.8%)" "IPR000795 (8.4%) IPR027417 (8.4%) IPR050055 (8.4%)" "Translational (tr)-type GTP-binding domain (8.4%) P-loop containing nucleoside triphosphate hydrolase (8.4%) Elongation factor Tu GTPase (8.4%)" IAMIAPNIILNIIRDYEVVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006207 (21.7%) GO:0006221 (21.7%)" GO:0009347 (21.7%) "GO:0046872 (21.7%) GO:0016740 (13%)" "'de novo' pyrimidine nucleobase biosynthetic process (21.7%) pyrimidine nucleotide biosynthetic process (21.7%)" aspartate carbamoyltransferase complex (21.7%) "metal ion binding (21.7%) transferase activity (13%)" "IPR002801 (20%) IPR020542 (20%) IPR020545 (20%)" "Aspartate transcarbamylase regulatory subunit (20%) Aspartate carbamoyltransferase regulatory subunit, C-terminal (20%) Aspartate carbamoyltransferase regulatory subunit, N-terminal (20%)" NGEFIEITEKDTEGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.11.1.26 (97.8%) 1.11.1.15 (2.2%)" "NADH-dependent peroxiredoxin (97.8%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (2.2%)" "GO:0006979 (14.6%) GO:0042744 (14.6%) GO:0045454 (14.6%)" "GO:0005829 (14.6%) GO:0005737 (0.2%) GO:0009321 (0.2%)" "GO:0008379 (14.6%) GO:0102039 (10.4%) GO:0004601 (0.7%)" "response to oxidative stress (14.6%) hydrogen peroxide catabolic process (14.6%) cell redox homeostasis (14.6%)" "cytosol (14.6%) cytoplasm (0.2%) alkyl hydroperoxide reductase complex (0.2%)" "thioredoxin peroxidase activity (14.6%) NADH-dependent peroxiredoxin activity (10.4%) peroxidase activity (0.7%)" "IPR036249 (14.7%) IPR000866 (14.3%) IPR050217 (14.3%)" "Thioredoxin-like superfamily (14.7%) Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (14.3%) Thiol-specific antioxidant peroxiredoxin (14.3%)" SVNHTHEGSIGNLCNEPIATMMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.3.2.1 (100%) argininosuccinate lyase (100%) GO:0042450 (33.3%) GO:0005829 (33.3%) GO:0004056 (33.3%) L-arginine biosynthetic process via ornithine (33.3%) cytosol (33.3%) argininosuccinate lyase activity (33.3%) "IPR000362 (16.7%) IPR008948 (16.7%) IPR009049 (16.7%)" "Fumarate lyase family (16.7%) L-Aspartase-like (16.7%) Argininosuccinate lyase (16.7%)" KVVVAEQNLGQFAGYLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.-.- (66.7%) 1.2.7.3 (33.3%)" "Acting on the aldehyde or oxo group of donors (66.7%) 2-oxoglutarate synthase (33.3%)" GO:0006979 (50%) "GO:0016903 (49.2%) GO:0047553 (0.8%)" response to oxidative stress (50%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors (49.2%) 2-oxoglutarate synthase activity (0.8%)" "IPR002869 (13.2%) IPR002880 (13.2%) IPR009014 (13.2%)" "Pyruvate-flavodoxin oxidoreductase, central domain (13.2%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (13.2%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (13.2%)" AVTRGDGVQGDDVTGNVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.5.1.2 (100%) DNA ligase (NAD(+)) (100%) "GO:0006260 (16.7%) GO:0006281 (16.7%)" GO:0005829 (16.7%) "GO:0003677 (16.7%) GO:0003911 (16.7%) GO:0046872 (16.7%)" "DNA replication (16.7%) DNA repair (16.7%)" cytosol (16.7%) "DNA binding (16.7%) DNA ligase (NAD+) activity (16.7%) metal ion binding (16.7%)" "IPR001357 (8.3%) IPR001679 (8.3%) IPR003583 (8.3%)" "BRCT domain (8.3%) NAD-dependent DNA ligase (8.3%) Helix-hairpin-helix DNA-binding motif, class 1 (8.3%)" ANPEQLEEQREETR root "GO:0006402 (0.3%) GO:0060699 (0.3%)" "GO:0005737 (33%) GO:0005829 (0.3%)" "GO:0019899 (32.7%) GO:0060698 (32.7%) GO:0008428 (0.3%)" "mRNA catabolic process (0.3%) regulation of endoribonuclease activity (0.3%)" "cytoplasm (33%) cytosol (0.3%)" "enzyme binding (32.7%) endoribonuclease inhibitor activity (32.7%) ribonuclease inhibitor activity (0.3%)" "IPR009671 (33.9%) IPR036701 (33.9%) IPR016716 (32.3%)" "Regulator of ribonuclease activity B domain (33.9%) RraB-like superfamily (33.9%) Regulator of ribonuclease activity B (32.3%)" IDAMDAANEMNNAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.3 (52.6%) 1.2.7.1 (47.4%)" "2-oxoglutarate synthase (52.6%) pyruvate synthase (47.4%)" "GO:0016903 (76.2%) GO:0019164 (11.9%) GO:0047553 (11.9%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (76.2%) pyruvate synthase activity (11.9%) 2-oxoglutarate synthase activity (11.9%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" NLNKTEEFLTTVKEGLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" AVDHIASILPEDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.4.2.9 (100%) uracil phosphoribosyltransferase (100%) "GO:0005525 (50%) GO:0016757 (34.4%) GO:0004845 (15.6%)" "GTP binding (50%) glycosyltransferase activity (34.4%) uracil phosphoribosyltransferase activity (15.6%)" "IPR000836 (50%) IPR029057 (50%)" "Phosphoribosyltransferase domain (50%) Phosphoribosyltransferase-like (50%)" LYFCIEFLHVKPGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043043 (33.3%) "GO:0005829 (31.6%) GO:0005737 (1.7%)" GO:0003746 (33.3%) peptide biosynthetic process (33.3%) "cytosol (31.6%) cytoplasm (1.7%)" translation elongation factor activity (33.3%) "IPR001059 (11.1%) IPR008991 (11.1%) IPR011768 (11.1%)" "Translation elongation factor P/YeiP, central (11.1%) Translation protein SH3-like domain superfamily (11.1%) Translation elongation factor P (11.1%)" MELVLKDAQSALTVSETTFGR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (19.8%) GO:0006353 (0.1%) GO:0006417 (0.1%)" "GO:0005840 (20.2%) GO:1990904 (19.8%) GO:0005737 (0%)" "GO:0003735 (19.9%) GO:0019843 (19.5%) GO:0001070 (0%)" "translation (19.8%) DNA-templated transcription termination (0.1%) regulation of translation (0.1%)" "ribosome (20.2%) ribonucleoprotein complex (19.8%) cytoplasm (0%)" "structural constituent of ribosome (19.9%) rRNA binding (19.5%) RNA-binding transcription regulator activity (0%)" "IPR002136 (33.4%) IPR023574 (33.4%) IPR013005 (33.3%)" "Large ribosomal subunit protein uL4 (33.4%) Large ribosomal subunit protein uL4 domain superfamily (33.4%) Large ribosomal subunit protein uL4-like (33.3%)" VSEVSETQADNLVHMLDAYAEK Collinsella aerofaciens Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella aerofaciens 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0005829 (50%) GO:0008861 (50%) cytosol (50%) formate C-acetyltransferase activity (50%) "IPR001150 (33.3%) IPR019777 (33.3%) IPR050244 (33.3%)" "Glycine radical domain (33.3%) Formate C-acetyltransferase glycine radical, conserved site (33.3%) Autonomous Glycyl Radical Cofactor (33.3%)" KKAELAAAEAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (46.3%) IPR023803 (46.3%) IPR020592 (7.4%)" "Small ribosomal subunit protein bS16 (46.3%) Small ribosomal subunit protein bS16 domain superfamily (46.3%) Small ribosomal subunit protein bS16, conserved site (7.4%)" AYNDFSQFVAQNTTMDKIVANAEESGYR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (58.3%) "GO:0016853 (37.5%) GO:0003755 (4.2%)" plasma membrane (58.3%) "isomerase activity (37.5%) peptidyl-prolyl cis-trans isomerase activity (4.2%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" KATIACEMNPVFCGSAYR Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004540 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFG/EF2 (6.3%)" SVFELTQQHHHDHLICLDCGK root "GO:1900705 (19.8%) GO:0045892 (0.7%) GO:0045893 (0.1%)" "GO:0005829 (19.8%) GO:0032993 (0.1%) GO:0005737 (0.1%)" "GO:0000976 (19.8%) GO:0008270 (19.8%) GO:0001217 (19.2%)" "negative regulation of siderophore biosynthetic process (19.8%) negative regulation of DNA-templated transcription (0.7%) positive regulation of DNA-templated transcription (0.1%)" "cytosol (19.8%) protein-DNA complex (0.1%) cytoplasm (0.1%)" "transcription cis-regulatory region binding (19.8%) zinc ion binding (19.8%) DNA-binding transcription repressor activity (19.2%)" "IPR002481 (25%) IPR036388 (25%) IPR036390 (25%)" "Ferric-uptake regulator (25%) Winged helix-like DNA-binding domain superfamily (25%) Winged helix DNA-binding domain superfamily (25%)" VGAYLLEELHKLPGIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.- (100%) Transaminases (100%) "GO:0008483 (33.3%) GO:0030170 (33.3%) GO:0042802 (33.3%)" "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%) identical protein binding (33.3%)" "IPR005814 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class-III (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" ALFNNAPDLGVAIRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.2%) GO:0005737 (14.2%) "GO:0000049 (14.2%) GO:0002161 (14.2%) GO:0004813 (14.2%)" alanyl-tRNA aminoacylation (14.2%) cytoplasm (14.2%) "tRNA binding (14.2%) aminoacyl-tRNA deacylase activity (14.2%) alanine-tRNA ligase activity (14.2%)" "IPR002318 (9.1%) IPR003156 (9.1%) IPR009000 (9.1%)" "Alanine-tRNA ligase, class IIc (9.1%) DHHA1 domain (9.1%) Translation protein, beta-barrel domain superfamily (9.1%)" GGLIVVAADDPSMHSSQNEQDSR Bacteria Bacteria 1.2.7.8 (100%) indolepyruvate ferredoxin oxidoreductase (100%) GO:0044281 (18.6%) "GO:0030976 (21.7%) GO:0043805 (20.7%) GO:0046872 (19%)" small molecule metabolic process (18.6%) "thiamine pyrophosphate binding (21.7%) indolepyruvate ferredoxin oxidoreductase activity (20.7%) metal ion binding (19%)" "IPR002880 (20.3%) IPR029061 (20.3%) IPR045025 (20.3%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20.3%) Thiamin diphosphate-binding fold (20.3%) TPP-binding domain containing protein HACL1-like (20.3%)" INKDGIWIEK root 4.2.1.2 (100%) fumarate hydratase (100%) "GO:0006099 (21.1%) GO:0006106 (0.2%)" "GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0046872 (21.1%) GO:0051539 (21.1%) GO:0004333 (21%)" "tricarboxylic acid cycle (21.1%) fumarate metabolic process (0.2%)" "cytosol (0.1%) membrane (0.1%)" "metal ion binding (21.1%) 4 iron, 4 sulfur cluster binding (21.1%) fumarate hydratase activity (21%)" "IPR004647 (17.1%) IPR051208 (17.1%) IPR004646 (17%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (17.1%) Class-I Fumarase/Tartrate Dehydratase (17.1%) Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (17%)" KKDIAELTEKLEGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" SVEVILGAICEAMNEGLQER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" AAGVSQDELDHIPGTGYLGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0005737 (33.3%) "GO:0016407 (33.3%) GO:0031405 (33.3%)" cytoplasm (33.3%) "acetyltransferase activity (33.3%) lipoic acid binding (33.3%)" "IPR000089 (12.7%) IPR001078 (12.7%) IPR004167 (12.7%)" "Biotin/lipoyl attachment (12.7%) 2-oxoacid dehydrogenase acyltransferase, catalytic domain (12.7%) Peripheral subunit-binding domain (12.7%)" IGTDPTYAPFESK root 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (44%) GO:1903810 (0.1%)" "GO:0030288 (55.2%) GO:0016020 (0.1%) GO:0030313 (0.1%)" "GO:0016597 (0.2%) GO:0005524 (0.1%) GO:0016787 (0.1%)" "amino acid transport (44%) L-histidine import across plasma membrane (0.1%)" "outer membrane-bounded periplasmic space (55.2%) membrane (0.1%) cell envelope (0.1%)" "amino acid binding (0.2%) ATP binding (0.1%) hydrolase activity (0.1%)" "IPR001638 (33.9%) IPR018313 (33.7%) IPR005768 (32.4%)" "Solute-binding protein family 3/N-terminal domain of MltF (33.9%) Solute-binding protein family 3, conserved site (33.7%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (32.4%)" LGDIEYREVPVEVKPEVR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria GO:0006950 (0.5%) "GO:0005829 (47.6%) GO:0005737 (0.5%)" "GO:0008861 (47.6%) GO:0003824 (1.9%) GO:0016829 (1.4%)" response to stress (0.5%) "cytosol (47.6%) cytoplasm (0.5%)" "formate C-acetyltransferase activity (47.6%) catalytic activity (1.9%) lyase activity (1.4%)" "IPR001150 (26%) IPR050244 (25%) IPR019777 (24.8%)" "Glycine radical domain (26%) Autonomous Glycyl Radical Cofactor (25%) Formate C-acetyltransferase glycine radical, conserved site (24.8%)" AVAAVNGPIAQALIGK root "4.2.1.11 (99.4%) 6.3.4.2 (0.6%)" "phosphopyruvate hydratase (99.4%) CTP synthase (glutamine hydrolyzing) (0.6%)" "GO:0006096 (16.8%) GO:0006396 (0.1%) GO:0006401 (0.1%)" "GO:0000015 (16.8%) GO:0005576 (16.4%) GO:0009986 (14.4%)" "GO:0000287 (16.8%) GO:0004634 (16.8%) GO:0016829 (0.3%)" "glycolytic process (16.8%) RNA processing (0.1%) RNA catabolic process (0.1%)" "phosphopyruvate hydratase complex (16.8%) extracellular region (16.4%) cell surface (14.4%)" "magnesium ion binding (16.8%) phosphopyruvate hydratase activity (16.8%) lyase activity (0.3%)" "IPR000941 (17.1%) IPR020811 (17.1%) IPR029017 (17.1%)" "Enolase (17.1%) Enolase, N-terminal (17.1%) Enolase-like, N-terminal (17.1%)" SSAVDIIVIDSVAALTPK Bacteria Bacteria "GO:0006281 (13.4%) GO:0006310 (13.4%) GO:0009432 (9.6%)" GO:0005829 (13.4%) "GO:0003697 (13.4%) GO:0005524 (13.4%) GO:0140664 (13.4%)" "DNA repair (13.4%) DNA recombination (13.4%) SOS response (9.6%)" cytosol (13.4%) "single-stranded DNA binding (13.4%) ATP binding (13.4%) ATP-dependent DNA damage sensor activity (13.4%)" "IPR013765 (12.5%) IPR020588 (12.5%) IPR027417 (12.5%)" "DNA recombination and repair protein RecA (12.5%) DNA recombination and repair protein RecA-like, ATP-binding domain (12.5%) P-loop containing nucleoside triphosphate hydrolase (12.5%)" GITINTSHVEYETANR Bacteria Bacteria 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0%) GO:0006790 (0%)" "GO:0005829 (15.6%) GO:0032045 (10%) GO:0005737 (0.5%)" "GO:0003746 (16.3%) GO:0003924 (16.2%) GO:0005525 (16.2%)" "translational elongation (0%) sulfur compound metabolic process (0%)" "cytosol (15.6%) guanyl-nucleotide exchange factor complex (10%) cytoplasm (0.5%)" "translation elongation factor activity (16.3%) GTPase activity (16.2%) GTP binding (16.2%)" "IPR000795 (8.5%) IPR027417 (8.5%) IPR031157 (8.5%)" "Translational (tr)-type GTP-binding domain (8.5%) P-loop containing nucleoside triphosphate hydrolase (8.5%) Tr-type G domain, conserved site (8.5%)" LALAGDYDSAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.3.3.7 (100%) 4-hydroxy-tetrahydrodipicolinate synthase (100%) "GO:0009089 (20.3%) GO:0019877 (20.3%)" "GO:0005829 (20.3%) GO:0016020 (18.8%)" GO:0008840 (20.3%) "lysine biosynthetic process via diaminopimelate (20.3%) diaminopimelate biosynthetic process (20.3%)" "cytosol (20.3%) membrane (18.8%)" 4-hydroxy-tetrahydrodipicolinate synthase activity (20.3%) "IPR002220 (25%) IPR005263 (25%) IPR013785 (25%)" "DapA-like (25%) 4-hydroxy-tetrahydrodipicolinate synthase, DapA (25%) Aldolase-type TIM barrel (25%)" SEGYRPYYVGPQYER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005980 (33.3%) "GO:0004134 (33.3%) GO:0004135 (33.3%)" glycogen catabolic process (33.3%) "4-alpha-glucanotransferase activity (33.3%) amylo-alpha-1,6-glucosidase activity (33.3%)" "IPR008928 (20%) IPR010401 (20%) IPR012341 (20%)" "Six-hairpin glycosidase superfamily (20%) Glycogen debranching enzyme (20%) Six-hairpin glycosidase-like superfamily (20%)" GMDKLFDFANR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" KVIETGYQLEPVYVDMFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" ESAPAAAAPAAQPALAAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.3.1.61 (98.6%) 2.3.1.- (1.4%)" "dihydrolipoyllysine-residue succinyltransferase (98.6%) Transferring groups other than amino-acyl groups (1.4%)" "GO:0006099 (19.4%) GO:0033512 (18.9%) GO:0006554 (0.3%)" "GO:0005829 (19.4%) GO:0045252 (19.2%) GO:0005737 (0.8%)" "GO:0004149 (20%) GO:0031405 (0.8%) GO:0016407 (0.6%)" "tricarboxylic acid cycle (19.4%) L-lysine catabolic process to acetyl-CoA via saccharopine (18.9%) lysine catabolic process (0.3%)" "cytosol (19.4%) oxoglutarate dehydrogenase complex (19.2%) cytoplasm (0.8%)" "dihydrolipoyllysine-residue succinyltransferase activity (20%) lipoic acid binding (0.8%) acetyltransferase activity (0.6%)" "IPR004167 (11.3%) IPR036625 (11.3%) IPR000089 (11.1%)" "Peripheral subunit-binding domain (11.3%) E3-binding domain superfamily (11.3%) Biotin/lipoyl attachment (11.1%)" EKPLKGEIVAVGNGTKDEEMVVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0051085 (1.7%) GO:0005737 (13.6%) "GO:0005524 (16.9%) GO:0044183 (16.9%) GO:0046872 (16.9%)" obsolete chaperone cofactor-dependent protein refolding (1.7%) cytoplasm (13.6%) "ATP binding (16.9%) protein folding chaperone (16.9%) metal ion binding (16.9%)" "IPR011032 (26.3%) IPR020818 (26.3%) IPR037124 (26.3%)" "GroES-like superfamily (26.3%) GroES chaperonin family (26.3%) GroES chaperonin superfamily (26.3%)" GSLYEVIYQMVGGLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" AKLLEAVKDVNAIIIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (50%) GO:0016616 (42.5%) GO:0004617 (7.5%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (42.5%) phosphoglycerate dehydrogenase activity (7.5%)" "IPR006139 (34.5%) IPR006140 (32.8%) IPR036291 (32.8%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (34.5%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (32.8%) NAD(P)-binding domain superfamily (32.8%)" KISNIEISAYASPDGGVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (47.8%) IPR019734 (47.8%) IPR013105 (4.3%)" "Tetratricopeptide-like helical domain superfamily (47.8%) Tetratricopeptide repeat (47.8%) Tetratricopeptide repeat 2 (4.3%)" DNTTIVDGAGAK Bacteria Bacteria 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (14.9%) GO:0009408 (5.5%)" "GO:0005737 (12.7%) GO:0009986 (5.5%) GO:0042603 (5.5%)" "GO:0005524 (14.9%) GO:0140662 (14.9%) GO:0016853 (13.3%)" "protein refolding (14.9%) response to heat (5.5%)" "cytoplasm (12.7%) cell surface (5.5%) capsule (5.5%)" "ATP binding (14.9%) ATP-dependent protein folding chaperone (14.9%) isomerase activity (13.3%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" YTITFSRDEDKLHAPDNAWVQQTR root "GO:0051274 (25%) GO:0007155 (0.2%) GO:0032049 (0.2%)" "GO:0030288 (24.8%) GO:0005886 (0.2%)" "GO:0030246 (24.8%) GO:0003824 (24.3%) GO:0016740 (0.3%)" "beta-glucan biosynthetic process (25%) cell adhesion (0.2%) cardiolipin biosynthetic process (0.2%)" "outer membrane-bounded periplasmic space (24.8%) plasma membrane (0.2%)" "carbohydrate binding (24.8%) catalytic activity (24.3%) transferase activity (0.3%)" "IPR007444 (14.5%) IPR014438 (14.5%) IPR011013 (14.4%)" "Glucan biosynthesis, periplasmic, MdoG C-terminal (14.5%) Glucan biosynthesis protein MdoG/MdoD (14.5%) Galactose mutarotase-like domain superfamily (14.4%)" ETSAKSEEKASTPAQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.3.1.61 (98.6%) 2.3.1.- (1.4%)" "dihydrolipoyllysine-residue succinyltransferase (98.6%) Transferring groups other than amino-acyl groups (1.4%)" "GO:0006099 (20%) GO:0033512 (19.5%) GO:0006086 (0.1%)" "GO:0005829 (20%) GO:0045252 (19.5%) GO:0005737 (0.2%)" "GO:0004149 (20.1%) GO:0031405 (0.2%) GO:0016407 (0.2%)" "tricarboxylic acid cycle (20%) L-lysine catabolic process to acetyl-CoA via saccharopine (19.5%) pyruvate decarboxylation to acetyl-CoA (0.1%)" "cytosol (20%) oxoglutarate dehydrogenase complex (19.5%) cytoplasm (0.2%)" "dihydrolipoyllysine-residue succinyltransferase activity (20.1%) lipoic acid binding (0.2%) acetyltransferase activity (0.2%)" "IPR000089 (11.2%) IPR011053 (11.2%) IPR036625 (11.2%)" "Biotin/lipoyl attachment (11.2%) Single hybrid motif (11.2%) E3-binding domain superfamily (11.2%)" GETQSLSTVTLGTK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8.2%) IPR012162 (8.2%) IPR015847 (8.2%)" "Exoribonuclease, phosphorolytic domain 1 (8.2%) Polyribonucleotide nucleotidyltransferase (8.2%) Exoribonuclease, phosphorolytic domain 2 (8.2%)" GKFMQEAVPEGTGAMAAIIGLDDASIAK root "2.3.1.39 (99.2%) 2.3.1.180 (0.8%)" "[acyl-carrier-protein] S-malonyltransferase (99.2%) beta-ketoacyl-[acyl-carrier-protein] synthase III (0.8%)" GO:0006633 (32.9%) GO:0005829 (32.6%) "GO:0004314 (32.9%) GO:0016746 (1.2%) GO:0004315 (0.3%)" fatty acid biosynthetic process (32.9%) cytosol (32.6%) "[acyl-carrier-protein] S-malonyltransferase activity (32.9%) acyltransferase activity (1.2%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (0.3%)" "IPR001227 (14.6%) IPR050858 (14.6%) IPR014043 (14.5%)" "Acyl transferase domain superfamily (14.6%) Malonyl CoA-ACP Transacylase/Polyketide Synthase FabD (14.6%) Acyl transferase domain (14.5%)" AITLDPAKTDLWR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0051301 (100%) cell division (100%) "IPR011990 (38.9%) IPR019734 (38.9%) IPR051685 (22.2%)" "Tetratricopeptide-like helical domain superfamily (38.9%) Tetratricopeptide repeat (38.9%) Ycf3/AcsC/BcsC/TPR Multifunctional (22.2%)" NADMADLER Pseudomonadati Bacteria Pseudomonadati "2.3.1.29 (99.3%) 2.3.1.50 (0.7%)" "glycine C-acetyltransferase (99.3%) serine C-palmitoyltransferase (0.7%)" "GO:0030148 (13.9%) GO:0019518 (13.8%) GO:0006567 (0.5%)" "GO:0005829 (14%) GO:0016020 (13.9%) GO:0005737 (0.2%)" "GO:0008890 (14.3%) GO:0030170 (14.3%) GO:0004758 (8%)" "sphingolipid biosynthetic process (13.9%) L-threonine catabolic process to glycine (13.8%) L-threonine catabolic process (0.5%)" "cytosol (14%) membrane (13.9%) cytoplasm (0.2%)" "glycine C-acetyltransferase activity (14.3%) pyridoxal phosphate binding (14.3%) serine C-palmitoyltransferase activity (8%)" "IPR004839 (16.6%) IPR011282 (16.6%) IPR015421 (16.6%)" "Aminotransferase, class I/classII, large domain (16.6%) 2-amino-3-ketobutyrate coenzyme A ligase (16.6%) Pyridoxal phosphate-dependent transferase, major domain (16.6%)" NLAPAGVTIAIVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20.1%) GO:0008615 (19.5%)" GO:0005737 (20.1%) "GO:0004648 (20.1%) GO:0030170 (20.1%)" "L-serine biosynthetic process (20.1%) pyridoxine biosynthetic process (19.5%)" cytoplasm (20.1%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20.1%) pyridoxal phosphate binding (20.1%)" "IPR000192 (16.9%) IPR015421 (16.9%) IPR015422 (16.9%)" "Aminotransferase class V domain (16.9%) Pyridoxal phosphate-dependent transferase, major domain (16.9%) Pyridoxal phosphate-dependent transferase, small domain (16.9%)" GVNKVILVGNLGQDPEVR root "GO:0006260 (21.5%) GO:0006281 (17.5%) GO:0006310 (17.4%)" "GO:0009295 (21.5%) GO:0044777 (0%) GO:0005829 (0%)" "GO:0003697 (21.6%) GO:0003677 (0.3%) GO:0008047 (0.1%)" "DNA replication (21.5%) DNA repair (17.5%) DNA recombination (17.4%)" "nucleoid (21.5%) single-stranded DNA-binding protein complex (0%) cytosol (0%)" "single-stranded DNA binding (21.6%) DNA binding (0.3%) enzyme activator activity (0.1%)" "IPR000424 (33.4%) IPR012340 (33.4%) IPR011344 (33.3%)" "Primosome PriB/single-strand DNA-binding (33.4%) Nucleic acid-binding, OB-fold (33.4%) Single-stranded DNA-binding protein (33.3%)" CKFWGLGSDGTVGANK Bacteria Bacteria "1.2.7.1 (92.4%) 1.2.7.- (7%) 1.2.1.51 (0.7%)" "pyruvate synthase (92.4%) With an iron-sulfur protein as acceptor (7%) pyruvate dehydrogenase (NADP(+)) (0.7%)" "GO:0006979 (17%) GO:0022900 (16.7%) GO:0044281 (0.7%)" "GO:0051539 (16.9%) GO:0005506 (16.7%) GO:0030976 (14.5%)" "response to oxidative stress (17%) electron transport chain (16.7%) small molecule metabolic process (0.7%)" "4 iron, 4 sulfur cluster binding (16.9%) iron ion binding (16.7%) thiamine pyrophosphate binding (14.5%)" "IPR019752 (7.8%) IPR050722 (7.8%) IPR002869 (7.8%)" "Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%) Pyruvate-flavodoxin oxidoreductase, central domain (7.8%)" TNHDGTGVVVDPAAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.3%) IPR004499 (11.3%) IPR006195 (11.3%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.3%) Proline-tRNA ligase, class IIa, archaeal-type (11.3%) Aminoacyl-tRNA synthetase, class II (11.3%)" TADFLDGIKNLGYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" NTYIYPPAFSMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (16.7%) IPR006099 (16.7%) IPR016176 (16.7%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (16.7%)" VMVTSHLGRPTEGEYNEEFSLLPVVNYLK root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.6%) GO:0006094 (16.6%) GO:0008615 (0%)" "GO:0005829 (16.6%) GO:0005737 (0%)" "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "glycolytic process (16.6%) gluconeogenesis (16.6%) pyridoxine biosynthetic process (0%)" "cytosol (16.6%) cytoplasm (0%)" "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (25%) IPR015824 (25%) IPR036043 (25%)" "Phosphoglycerate kinase (25%) Phosphoglycerate kinase, N-terminal (25%) Phosphoglycerate kinase superfamily (25%)" SDEAYKEQFIQDYLFASGVADGALK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" DGAPDKMGNMTGAYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" TGETIEIPATYGVR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0030261 (24.6%) GO:0005829 (25.1%) "GO:0003677 (25.1%) GO:0030527 (25.1%)" chromosome condensation (24.6%) cytosol (25.1%) "DNA binding (25.1%) structural constituent of chromatin (25.1%)" "IPR000119 (50%) IPR010992 (50%)" "Histone-like DNA-binding protein (50%) Integration host factor (IHF)-like DNA-binding domain superfamily (50%)" NNDEVIATLYER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) GO:0000428 (16.8%) "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0000287 (16.1%)" DNA-templated transcription (16.8%) DNA-directed RNA polymerase complex (16.8%) "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) magnesium ion binding (16.1%)" "IPR007081 (9.1%) IPR007083 (9.1%) IPR038120 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.1%) RNA polymerase Rpb1, domain 4 (9.1%) RNA polymerase Rpb1, funnel domain superfamily (9.1%)" AIAPFVEAAQLAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.99.2 (100%) pyridoxine 5'-phosphate synthase (100%) GO:0008615 (33.3%) GO:0005829 (33.3%) GO:0033856 (33.3%) pyridoxine biosynthetic process (33.3%) cytosol (33.3%) pyridoxine 5'-phosphate synthase activity (33.3%) "IPR004569 (33.3%) IPR013785 (33.3%) IPR036130 (33.3%)" "Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ (33.3%) Aldolase-type TIM barrel (33.3%) Pyridoxine 5'-phosphate synthase (33.3%)" LDNVATSNSSIEYR Pseudomonadati Bacteria Pseudomonadati "GO:0015920 (21.9%) GO:0043165 (21.9%) GO:0061024 (4.3%)" "GO:0009279 (25.8%) GO:1990351 (25.8%) GO:0019867 (0.4%)" "lipopolysaccharide transport (21.9%) Gram-negative-bacterium-type cell outer membrane assembly (21.9%) membrane organization (4.3%)" "cell outer membrane (25.8%) transporter complex (25.8%) outer membrane (0.4%)" "IPR007543 (27.4%) IPR050218 (27%) IPR020889 (23%)" "LptD, C-terminal (27.4%) Lipopolysaccharide Assembly Protein LptD (27%) LPS-assembly protein LptD (23%)" GLSAENCADKTKGAYTGEVSAAMVASTGAK Candidatus Limisoma intestinavium Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Candidatus Limisoma Candidatus Limisoma intestinavium 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" ILEKDIPEHTAGIEFILNTLVSPEYGAIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" LEDAPWPATKDELIDYAMR Bacteroidota Bacteria Pseudomonadati Bacteroidota IPR021527 (100%) Protein of unknown function DUF2795 (100%) GYLCGSAWR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (24.9%) "GO:0004639 (25%) GO:0005524 (25%) GO:0016874 (0.1%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (24.9%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%) ligase activity (0.1%)" "IPR028923 (50.1%) IPR018236 (49.9%)" "SAICAR synthetase/ADE2, N-terminal (50.1%) SAICAR synthetase, conserved site (49.9%)" GVILSGSPYSVYDENAFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (12.5%) IPR004739 (12.5%) IPR014729 (12.5%)" "GMP synthase, C-terminal (12.5%) GMP synthase, glutamine amidotransferase (12.5%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" VGALLTHVFAGNVTK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (25%) IPR022615 (25%) IPR056147 (25%)" "Na(+)-translocating NADH-quinone reductase subunit A (25%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (25%) NqrA, N-terminal barrel-sandwich hybrid domain (25%)" EVAPDQVPANAIQMGAGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR027823 (100%) Domain of unknown function DUF4468 with TBP-like fold (100%) YGDGQENGIHTQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (13%) GO:0006261 (11.6%)" "GO:0005737 (12.3%) GO:0005694 (11.6%)" "GO:0003677 (13%) GO:0005524 (13%) GO:0046872 (12.3%)" "DNA topological change (13%) DNA-templated DNA replication (11.6%)" "cytoplasm (12.3%) chromosome (11.6%)" "DNA binding (13%) ATP binding (13%) metal ion binding (12.3%)" "IPR000565 (7.9%) IPR001241 (7.9%) IPR006171 (7.9%)" "DNA topoisomerase, type IIA, subunit B (7.9%) DNA topoisomerase, type IIA (7.9%) TOPRIM domain (7.9%)" KMTTIDKLTADGTYSNLSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (32.7%) "GO:0022627 (32.7%) GO:0005840 (1.9%)" GO:0003735 (32.7%) translation (32.7%) "cytosolic small ribosomal subunit (32.7%) ribosome (1.9%)" structural constituent of ribosome (32.7%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" SLRDIISDVIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) GO:0000428 (17%) "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (15.2%)" DNA-templated transcription (17%) DNA-directed RNA polymerase complex (17%) "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (15.2%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" IQEKYENGSGSTGTQNNQNSTR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006811 (20%) "GO:0009279 (20%) GO:0046930 (20%)" "GO:0015159 (20%) GO:0015288 (20%)" monoatomic ion transport (20%) "cell outer membrane (20%) pore complex (20%)" "polysaccharide transmembrane transporter activity (20%) porin activity (20%)" "IPR003715 (25%) IPR019554 (25%) IPR049712 (25%)" "Polysaccharide export protein, N-terminal domain (25%) Soluble ligand binding domain (25%) Polysaccharide export protein (25%)" LDKSDEEAINAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.1%) "GO:0022627 (32.7%) GO:0005840 (1.1%)" GO:0003735 (33.1%) translation (33.1%) "cytosolic small ribosomal subunit (32.7%) ribosome (1.1%)" structural constituent of ribosome (33.1%) "IPR001865 (25.2%) IPR023591 (25.2%) IPR005706 (24.9%)" "Small ribosomal subunit protein uS2 (25.2%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.2%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (24.9%)" GAWAEWEIENIEMAVPISPEELR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0006044 (32.3%) GO:0005975 (32%)" "GO:0004342 (33.1%) GO:0016853 (2.3%) GO:0016787 (0.3%)" "N-acetylglucosamine metabolic process (32.3%) carbohydrate metabolic process (32%)" "glucosamine-6-phosphate deaminase activity (33.1%) isomerase activity (2.3%) hydrolase activity (0.3%)" "IPR024078 (15.3%) IPR052960 (15.3%) IPR003737 (14.9%)" "Putative deacetylase LmbE-like domain superfamily (15.3%) Glucosamine-6-phosphate deaminase-like (15.3%) N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.9%)" VPAGSVVVSGNLPSKDGK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 2.3.1.117 (100%) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (100%) "GO:0019877 (19.9%) GO:0009089 (19.7%) GO:0009085 (0.3%)" "GO:0005737 (19.7%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0008666 (20.1%) GO:0016779 (19.9%) GO:0016746 (0.2%)" "diaminopimelate biosynthetic process (19.9%) lysine biosynthetic process via diaminopimelate (19.7%) lysine biosynthetic process (0.3%)" "cytoplasm (19.7%) cytosol (0%) membrane (0%)" "2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity (20.1%) nucleotidyltransferase activity (19.9%) acyltransferase activity (0.2%)" "IPR011004 (17%) IPR001451 (16.8%) IPR005664 (16.6%)" "Trimeric LpxA-like superfamily (17%) Hexapeptide repeat (16.8%) Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family (16.6%)" LGDNAAMCFIELVDYNENMLKDTAAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.3%) IPR036373 (33.3%) IPR047859 (33.3%)" "Large ribosomal subunit protein bL17 (33.3%) Large ribosomal subunit protein bL17 superfamily (33.3%) Large ribosomal subunit protein bL17, conserved site (33.3%)" DCFYGQEDAPVIVGGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (85.7%) 1.2.7.- (14.3%)" "pyruvate synthase (85.7%) With an iron-sulfur protein as acceptor (14.3%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (12.8%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (12.8%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" LKTLDQLPDSCAASAAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" AQQDMEKANNDLMAPVYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" TLGGIIIPDSAK Pseudomonadati Bacteria Pseudomonadati GO:0051085 (0.6%) GO:0005737 (16.1%) "GO:0005524 (16.7%) GO:0044183 (16.7%) GO:0046872 (16.7%)" obsolete chaperone cofactor-dependent protein refolding (0.6%) cytoplasm (16.1%) "ATP binding (16.7%) protein folding chaperone (16.7%) metal ion binding (16.7%)" "IPR011032 (25.9%) IPR020818 (25.9%) IPR037124 (25.9%)" "GroES-like superfamily (25.9%) GroES chaperonin family (25.9%) GroES chaperonin superfamily (25.9%)" RKEMLEDIAVLTGGVVISEEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.4%) GO:0005737 (15.6%) "GO:0005524 (17.4%) GO:0140662 (17.4%) GO:0016853 (16.5%)" protein refolding (17.4%) cytoplasm (15.6%) "ATP binding (17.4%) ATP-dependent protein folding chaperone (17.4%) isomerase activity (16.5%)" "IPR001844 (17.1%) IPR002423 (17.1%) IPR027409 (17.1%)" "Chaperonin Cpn60/GroEL (17.1%) Chaperonin Cpn60/GroEL/TCP-1 family (17.1%) GroEL-like apical domain superfamily (17.1%)" VVREDLLTSVHVDEYILEVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (8%) IPR015712 (8%) IPR007121 (7.8%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (8%) DNA-directed RNA polymerase, subunit 2 (8%) RNA polymerase, beta subunit, conserved site (7.8%)" AGDTVLYGK Pseudomonadati Bacteria Pseudomonadati GO:0051085 (1.5%) GO:0005737 (15.5%) "GO:0005524 (16.6%) GO:0044183 (16.6%) GO:0046872 (16.6%)" obsolete chaperone cofactor-dependent protein refolding (1.5%) cytoplasm (15.5%) "ATP binding (16.6%) protein folding chaperone (16.6%) metal ion binding (16.6%)" "IPR011032 (28.6%) IPR020818 (28.6%) IPR037124 (28.6%)" "GroES-like superfamily (28.6%) GroES chaperonin family (28.6%) GroES chaperonin superfamily (28.6%)" YITNKYPDKK Bacteria Bacteria "4.2.1.1 (72%) 4.2.1.- (28%)" "carbonic anhydrase (72%) Hydro-lyases (28%)" "GO:0004089 (49.8%) GO:0008270 (49.8%) GO:0016829 (0.4%)" "carbonate dehydratase activity (49.8%) zinc ion binding (49.8%) lyase activity (0.4%)" "IPR001765 (50%) IPR036874 (50%)" "Carbonic anhydrase (50%) Carbonic anhydrase superfamily (50%)" AAELGYVDEVIDPAITR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.-.-.- (100%) Ligases (100%) GO:0015977 (24.4%) GO:0009317 (24.4%) "GO:0003989 (24.4%) GO:0004658 (24.4%) GO:0016740 (2.3%)" carbon fixation (24.4%) acetyl-CoA carboxylase complex (24.4%) "acetyl-CoA carboxylase activity (24.4%) propionyl-CoA carboxylase activity (24.4%) transferase activity (2.3%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" AKDYATVVTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" IGYFNVDKDSTPEHLVFNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (25%) GO:0005829 (25%) "GO:0004819 (25%) GO:0005524 (25%)" glutaminyl-tRNA aminoacylation (25%) cytosol (25%) "glutamine-tRNA ligase activity (25%) ATP binding (25%)" "IPR020059 (10.5%) IPR049437 (10.5%) IPR050132 (10.5%)" "Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain (10.5%) tRNA synthetases class I (E and Q), anti-codon binding domain (10.5%) Glutamine/Glutamate--tRNA Ligase (10.5%)" IDQLSSDVQTLNAK root "GO:0030258 (16.3%) GO:0043580 (16.3%) GO:0006096 (0%)" "GO:0009279 (17.4%) GO:0005576 (17.1%) GO:0019867 (0.1%)" "GO:0008289 (16.3%) GO:0042834 (16.3%) GO:0005524 (0%)" "lipid modification (16.3%) periplasmic space organization (16.3%) glycolytic process (0%)" "cell outer membrane (17.4%) extracellular region (17.1%) outer membrane (0.1%)" "lipid binding (16.3%) peptidoglycan binding (16.3%) ATP binding (0%)" "IPR006817 (49.9%) IPR016367 (49.9%) IPR015795 (0.1%)" "Lipoprotein leucine-zipper (49.9%) Major outer membrane lipoprotein Lpp (49.9%) Pyruvate kinase, C-terminal (0.1%)" IAGETLYIYAPLAHR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "2.7.6.5 (81%) 3.1.7.2 (19%)" "GTP diphosphokinase (81%) guanosine-3',5'-bis(diphosphate) 3'-diphosphatase (19%)" GO:0015969 (33.8%) GO:0005886 (34.8%) "GO:0016301 (15.5%) GO:0016787 (7.2%) GO:0008728 (6.8%)" guanosine tetraphosphate metabolic process (33.8%) plasma membrane (34.8%) "kinase activity (15.5%) hydrolase activity (7.2%) GTP diphosphokinase activity (6.8%)" "IPR003607 (10%) IPR007685 (9.9%) IPR043519 (9.9%)" "HD/PDEase domain (10%) RelA/SpoT (9.9%) Nucleotidyltransferase superfamily (9.9%)" SDVTGSISTAKGEEMLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR012910 (12.9%) IPR023996 (12.9%) IPR023997 (12.9%)" "TonB-dependent receptor, plug domain (12.9%) TonB-dependent outer membrane protein, SusC/RagA (12.9%) TonB-dependent outer membrane protein SusC/RagA, conserved site (12.9%)" WLEWDEASKVGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (19.7%) GO:0042274 (19.7%)" "GO:0015935 (19.7%) GO:0005840 (0.5%) GO:1990904 (0.5%)" "GO:0019843 (20.2%) GO:0003735 (19.7%)" "translation (19.7%) ribosomal small subunit biogenesis (19.7%)" "small ribosomal subunit (19.7%) ribosome (0.5%) ribonucleoprotein complex (0.5%)" "rRNA binding (20.2%) structural constituent of ribosome (19.7%)" "IPR002942 (17%) IPR036986 (17%) IPR001912 (16.5%)" "RNA-binding S4 domain (17%) RNA-binding S4 domain superfamily (17%) Small ribosomal subunit protein uS4, N-terminal (16.5%)" TQTAPVATPQELADYDAIIFGTPTR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.6.5.2 (100%) NAD(P)H dehydrogenase (quinone) (100%) GO:0006979 (0.2%) "GO:0016020 (15.8%) GO:0005829 (0.2%) GO:0032991 (0.2%)" "GO:0010181 (16%) GO:0050660 (14.7%) GO:0050661 (14.7%)" response to oxidative stress (0.2%) "membrane (15.8%) cytosol (0.2%) protein-containing complex (0.2%)" "FMN binding (16%) flavin adenine dinucleotide binding (14.7%) NADP binding (14.7%)" "IPR005025 (20.3%) IPR008254 (20.3%) IPR010089 (20.3%)" "NADPH-dependent FMN reductase-like domain (20.3%) Flavodoxin/nitric oxide synthase (20.3%) Flavoprotein WrbA-like (20.3%)" WYKEQGGIAAMEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" HVAFPAGATTEQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.23 (100%) beta-galactosidase (100%) "GO:0006004 (24.6%) GO:0016139 (24.6%)" GO:0005764 (24.6%) "GO:0004560 (24.6%) GO:0004565 (1.8%)" "fucose metabolic process (24.6%) glycoside catabolic process (24.6%)" lysosome (24.6%) "alpha-L-fucosidase activity (24.6%) beta-galactosidase activity (1.8%)" "IPR000421 (25%) IPR000933 (25%) IPR008979 (25%)" "Coagulation factor 5/8, C-terminal domain (25%) Glycoside hydrolase, family 29 (25%) Galactose-binding-like domain superfamily (25%)" TPAQAQAVHK root 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0019563 (16.6%)" "GO:0005829 (16.6%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0004807 (16.6%) GO:0016853 (0.2%) GO:0042802 (0%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) glycerol catabolic process (16.6%)" "cytosol (16.6%) cytoplasm (0%) membrane (0%)" "triose-phosphate isomerase activity (16.6%) isomerase activity (0.2%) identical protein binding (0%)" "IPR000652 (20.1%) IPR013785 (20.1%) IPR035990 (20.1%)" "Triosephosphate isomerase (20.1%) Aldolase-type TIM barrel (20.1%) Triosephosphate isomerase superfamily (20.1%)" TSNYDTDVFQPIIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR002318 (9.1%) IPR003156 (9.1%) IPR012947 (9.1%)" "Alanine-tRNA ligase, class IIc (9.1%) DHHA1 domain (9.1%) Threonyl/alanyl tRNA synthetase, SAD (9.1%)" KDHPQVMNAAVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (32%) GO:1902600 (32%) GO:0006811 (1.3%)" "GO:0005524 (33.3%) GO:0016787 (1.3%)" "ATP metabolic process (32%) proton transmembrane transport (32%) monoatomic ion transport (1.3%)" "ATP binding (33.3%) hydrolase activity (1.3%)" "IPR000194 (20.2%) IPR022879 (20.2%) IPR027417 (20.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.2%) V-type ATP synthase regulatory subunit B/beta (20.2%) P-loop containing nucleoside triphosphate hydrolase (20.2%)" RVPETMPPQLFEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.6.5.2 (100%) NAD(P)H dehydrogenase (quinone) (100%) GO:0006979 (0.2%) "GO:0016020 (16.2%) GO:0005829 (0.2%) GO:0032991 (0.2%)" "GO:0010181 (16.4%) GO:0050660 (14.2%) GO:0050661 (14.2%)" response to oxidative stress (0.2%) "membrane (16.2%) cytosol (0.2%) protein-containing complex (0.2%)" "FMN binding (16.4%) flavin adenine dinucleotide binding (14.2%) NADP binding (14.2%)" "IPR008254 (20.9%) IPR029039 (20.9%) IPR005025 (20%)" "Flavodoxin/nitric oxide synthase (20.9%) Flavoprotein-like superfamily (20.9%) NADPH-dependent FMN reductase-like domain (20%)" SNGDIDTNEQVRR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" ALHWVLVGAQPSDTVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" VGGAFHSPLMEPAR root 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0006633 (33%) "GO:0005829 (33%) GO:0005835 (0.1%)" "GO:0004314 (34%) GO:0004312 (0.1%)" fatty acid biosynthetic process (33%) "cytosol (33%) fatty acid synthase complex (0.1%)" "[acyl-carrier-protein] S-malonyltransferase activity (34%) fatty acid synthase activity (0.1%)" "IPR014043 (14.4%) IPR001227 (14.3%) IPR004410 (14.3%)" "Acyl transferase domain (14.4%) Acyl transferase domain superfamily (14.3%) Malonyl CoA-acyl carrier protein transacylase, FabD-type (14.3%)" GILPFCQDTGTAIIHGEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (22.7%) "GO:0046872 (23%) GO:0051539 (23%) GO:0004333 (21.8%)" tricarboxylic acid cycle (22.7%) "metal ion binding (23%) 4 iron, 4 sulfur cluster binding (23%) fumarate hydratase activity (21.8%)" "IPR004646 (18.6%) IPR051208 (18.6%) IPR004647 (18.3%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (18.6%) Class-I Fumarase/Tartrate Dehydratase (18.6%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (18.3%)" YDTAIILNQPSLEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (50%) 1.2.7.3 (50%)" "pyruvate synthase (50%) 2-oxoglutarate synthase (50%)" "GO:0016903 (76.9%) GO:0019164 (11.5%) GO:0047553 (11.5%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (76.9%) pyruvate synthase activity (11.5%) 2-oxoglutarate synthase activity (11.5%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" ILQFTEMIVQDYLAQEMCDRRPPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "4.1.1.12 (90%) 2.6.1.1 (10%)" "aspartate 4-decarboxylase (90%) aspartate transaminase (10%)" GO:0006520 (28.1%) "GO:0030170 (28.1%) GO:0008483 (24.6%) GO:0047688 (10.5%)" amino acid metabolic process (28.1%) "pyridoxal phosphate binding (28.1%) transaminase activity (24.6%) aspartate 4-decarboxylase activity (10.5%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" LLNEHGEFLNKEEGNEVLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.10 (81.3%) 5.4.2.2 (12.5%) 5.4.2.8 (6.3%)" "phosphoglucosamine mutase (81.3%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (12.5%) phosphomannomutase (6.3%)" "GO:0005975 (14%) GO:0006048 (14%) GO:0009252 (14%)" GO:0005829 (14%) "GO:0000287 (14%) GO:0004615 (14%) GO:0008966 (14%)" "carbohydrate metabolic process (14%) UDP-N-acetylglucosamine biosynthetic process (14%) peptidoglycan biosynthetic process (14%)" cytosol (14%) "magnesium ion binding (14%) phosphomannomutase activity (14%) phosphoglucosamine mutase activity (14%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" YLEGAEYTAALVEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.-.- (100%) Glycosylases (100%) GO:0006508 (10%) GO:0005737 (75%) "GO:0008233 (10%) GO:0016798 (5%)" proteolysis (10%) cytoplasm (75%) "peptidase activity (10%) hydrolase activity, acting on glycosyl bonds (5%)" "IPR002818 (25%) IPR006287 (25%) IPR029062 (25%)" "DJ-1/PfpI (25%) Protein/nucleic acid deglycase DJ-1 (25%) Class I glutamine amidotransferase-like (25%)" MLDEYIALMEEAKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.6%) GO:0005737 (16.6%) "GO:0000049 (16.6%) GO:0004829 (16.6%) GO:0005524 (16.6%)" threonyl-tRNA aminoacylation (16.6%) cytoplasm (16.6%) "tRNA binding (16.6%) threonine-tRNA ligase activity (16.6%) ATP binding (16.6%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" HGFGGVGQTTHGQHNR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (24.3%) "GO:0022625 (21.6%) GO:0005840 (2.9%) GO:1990904 (2.7%)" "GO:0003735 (24.3%) GO:0019843 (24.3%)" translation (24.3%) "cytosolic large ribosomal subunit (21.6%) ribosome (2.9%) ribonucleoprotein complex (2.7%)" "structural constituent of ribosome (24.3%) rRNA binding (24.3%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" ITFTQNPDQLAIMTLNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.14.12 (100%) Xaa-Xaa-Pro tripeptidyl-peptidase (100%) GO:0006508 (32.6%) "GO:0008236 (32.6%) GO:0008239 (32.6%) GO:0004177 (2.2%)" proteolysis (32.6%) "serine-type peptidase activity (32.6%) dipeptidyl-peptidase activity (32.6%) aminopeptidase activity (2.2%)" "IPR001375 (25%) IPR002469 (25%) IPR029058 (25%)" "Peptidase S9, prolyl oligopeptidase, catalytic domain (25%) Dipeptidylpeptidase IV, N-terminal domain (25%) Alpha/Beta hydrolase fold (25%)" VQDEVEIVGLADEPRK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20%) "GO:0000287 (20%) GO:0003746 (20%) GO:0003924 (20%)" cytosol (20%) "magnesium ion binding (20%) translation elongation factor activity (20%) GTPase activity (20%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" NAFAHSSGIHQDGVLK root 2.3.3.13 (100%) 2-isopropylmalate synthase (100%) "GO:0009098 (25.5%) GO:0006099 (0%) GO:0006260 (0%)" "GO:0005737 (9.1%) GO:0005829 (7.1%)" "GO:0003852 (25.5%) GO:0003985 (16%) GO:0030145 (16%)" "L-leucine biosynthetic process (25.5%) tricarboxylic acid cycle (0%) DNA replication (0%)" "cytoplasm (9.1%) cytosol (7.1%)" "2-isopropylmalate synthase activity (25.5%) acetyl-CoA C-acetyltransferase activity (16%) manganese ion binding (16%)" "IPR050073 (14.4%) IPR054691 (14.4%) IPR000891 (14.3%)" "2-IPM synthase/homocitrate synthase-like (14.4%) 2-isopropylmalate synthase/homocitrate synthase, post-catalytic domain (14.4%) Pyruvate carboxyltransferase (14.3%)" VDTSEAIANIPENR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GFKDYSVGTIEGYPTFDTMVAQVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.99.1.3 (100%) sirohydrochlorin cobaltochelatase (100%) GO:0019251 (33.3%) "GO:0016852 (33.3%) GO:0046872 (33.3%)" anaerobic cobalamin biosynthetic process (33.3%) "sirohydrochlorin cobaltochelatase activity (33.3%) metal ion binding (33.3%)" IPR010388 (100%) Anaerobic cobalt chelatase (100%) AISEADATVER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.8%) IPR012944 (33.8%) IPR033985 (32.4%)" "Tetratricopeptide-like helical domain superfamily (33.8%) RagB/SusD domain (33.8%) SusD-like, N-terminal (32.4%)" THSSNAPIGDSAPTTSCYMTGQPSR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50%) GO:0046872 (50%)" "alkaline phosphatase activity (50%) metal ion binding (50%)" "IPR001952 (50%) IPR017850 (50%)" "Alkaline phosphatase (50%) Alkaline-phosphatase-like, core domain superfamily (50%)" GIPVDIHEKEGK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (12.8%) GO:0006261 (12.2%)" "GO:0005694 (12.2%) GO:0005737 (12.2%)" "GO:0003677 (12.8%) GO:0005524 (12.8%) GO:0034335 (12.2%)" "DNA topological change (12.8%) DNA-templated DNA replication (12.2%)" "chromosome (12.2%) cytoplasm (12.2%)" "DNA binding (12.8%) ATP binding (12.8%) DNA negative supercoiling activity (12.2%)" "IPR000565 (7.7%) IPR001241 (7.7%) IPR003594 (7.7%)" "DNA topoisomerase, type IIA, subunit B (7.7%) DNA topoisomerase, type IIA (7.7%) Histidine kinase/HSP90-like ATPase domain (7.7%)" NGELVDKQVGAVGKPAFVEKVEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" QLLVAGAGDAFDGIGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.14.12 (100%) Xaa-Xaa-Pro tripeptidyl-peptidase (100%) GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001375 (33.3%) IPR011042 (33.3%) IPR029058 (33.3%)" "Peptidase S9, prolyl oligopeptidase, catalytic domain (33.3%) Six-bladed beta-propeller, TolB-like (33.3%) Alpha/Beta hydrolase fold (33.3%)" ELTTISLSPESIAR ANEVVEVFTEFPELVDPHTGRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) GO:0042777 (23.6%) "GO:0005524 (23.6%) GO:0046933 (23.6%) GO:0046961 (23.6%)" proton motive force-driven plasma membrane ATP synthesis (23.6%) "ATP binding (23.6%) proton-transporting ATP synthase activity, rotational mechanism (23.6%) proton-transporting ATPase activity, rotational mechanism (23.6%)" "IPR000194 (14.3%) IPR004100 (14.3%) IPR020003 (14.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (14.3%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (14.3%)" SVGEAIVEATKNGAFSLVGGGDSVACVNK root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" SQNGAAMSFGR root 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (30.8%) GO:0005975 (0.1%) GO:0044814 (0%)" "GO:0005829 (31.8%) GO:0005737 (0.1%) GO:0005886 (0%)" "GO:0008861 (31.9%) GO:0016829 (4.7%) GO:0016746 (0.5%)" "glucose metabolic process (30.8%) carbohydrate metabolic process (0.1%) pyruvate fermentation via PFL (0%)" "cytosol (31.8%) cytoplasm (0.1%) plasma membrane (0%)" "formate C-acetyltransferase activity (31.9%) lyase activity (4.7%) acyltransferase activity (0.5%)" "IPR004184 (20.5%) IPR050244 (20.5%) IPR005949 (19.7%)" "Pyruvate formate lyase domain (20.5%) Autonomous Glycyl Radical Cofactor (20.5%) Formate acetyltransferase (19.7%)" HKLIDVIGDIALIGKPIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.5.1.108 (50%) 4.2.1.59 (50%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase (50%) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (50%)" "GO:0006633 (14.3%) GO:0009245 (14.3%)" "GO:0005737 (14.3%) GO:0016020 (14.3%)" "GO:0046872 (14.3%) GO:0103117 (14.3%) GO:0019171 (11%)" "fatty acid biosynthetic process (14.3%) lipid A biosynthetic process (14.3%)" "cytoplasm (14.3%) membrane (14.3%)" "metal ion binding (14.3%) UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.3%) (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (11%)" "IPR004463 (14.3%) IPR010084 (14.3%) IPR011334 (14.3%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.3%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (14.3%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.3%)" TDIKNEEAGEKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (24.8%) GO:0005829 (24.8%) "GO:0004819 (24.8%) GO:0005524 (24.8%) GO:0016874 (0.6%)" glutaminyl-tRNA aminoacylation (24.8%) cytosol (24.8%) "glutamine-tRNA ligase activity (24.8%) ATP binding (24.8%) ligase activity (0.6%)" "IPR000924 (10.2%) IPR014729 (10.2%) IPR020058 (10.2%)" "Glutamyl/glutaminyl-tRNA synthetase (10.2%) Rossmann-like alpha/beta/alpha sandwich fold (10.2%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (10.2%)" IEAGIIHVGDEVEILGLGEDKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20.2%) "GO:0003746 (20.2%) GO:0003924 (20.2%) GO:0005525 (20.2%)" cytosol (20.2%) "translation elongation factor activity (20.2%) GTPase activity (20.2%) GTP binding (20.2%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" FSAMLDSLGIDQPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (13.6%) GO:0006526 (13.6%) GO:0006541 (13.6%)" GO:0005737 (13.6%) "GO:0004088 (13.6%) GO:0005524 (13.6%) GO:0046872 (13.6%)" "pyrimidine nucleotide biosynthetic process (13.6%) L-arginine biosynthetic process (13.6%) glutamine metabolic process (13.6%)" cytoplasm (13.6%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.6%) ATP binding (13.6%) metal ion binding (13.6%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" LQGQYTSGPCSVSQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.6.1.- (94.8%) 2.6.1.1 (5.2%)" "Transaminases (94.8%) aspartate transaminase (5.2%)" GO:0006520 (33.3%) "GO:0030170 (33.3%) GO:0008483 (31.8%) GO:0004069 (1.6%)" amino acid metabolic process (33.3%) "pyridoxal phosphate binding (33.3%) transaminase activity (31.8%) L-aspartate:2-oxoglutarate aminotransferase activity (1.6%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" LLACDYEGIRPDILILGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.13 (100%) ornithine aminotransferase (100%) "GO:0010121 (14.8%) GO:0019544 (14.8%) GO:0055129 (11.4%)" GO:0005737 (14.8%) "GO:0004587 (14.8%) GO:0030170 (14.8%) GO:0042802 (14.8%)" "L-arginine catabolic process to proline via ornithine (14.8%) L-arginine catabolic process to L-glutamate (14.8%) L-proline biosynthetic process (11.4%)" cytoplasm (14.8%) "ornithine aminotransferase activity (14.8%) pyridoxal phosphate binding (14.8%) identical protein binding (14.8%)" "IPR005814 (14.3%) IPR010164 (14.3%) IPR015421 (14.3%)" "Aminotransferase class-III (14.3%) Ornithine aminotransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%)" SVGEAIVEATK root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" YMSASATTPTGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (50%) GO:0015344 (50%) cell outer membrane (50%) siderophore uptake transmembrane transporter activity (50%) "IPR000531 (20%) IPR012910 (20%) IPR036942 (20%)" "TonB-dependent receptor-like, beta-barrel (20%) TonB-dependent receptor, plug domain (20%) TonB-dependent receptor-like, beta-barrel domain superfamily (20%)" VLCTASIEEGVPR Bacteria Bacteria 2.7.7.56 (100%) tRNA nucleotidyltransferase (100%) "GO:0016075 (16.7%) GO:0008033 (16.6%) GO:0031125 (15.3%)" GO:0005829 (0%) "GO:0009022 (16.8%) GO:0000049 (16.6%) GO:0000175 (16.2%)" "rRNA catabolic process (16.7%) tRNA processing (16.6%) rRNA 3'-end processing (15.3%)" cytosol (0%) "tRNA nucleotidyltransferase activity (16.8%) tRNA binding (16.6%) 3'-5'-RNA exonuclease activity (16.2%)" "IPR001247 (12.7%) IPR020568 (12.6%) IPR027408 (12.6%)" "Exoribonuclease, phosphorolytic domain 1 (12.7%) Ribosomal protein uS5 domain 2-type superfamily (12.6%) PNPase/RNase PH domain superfamily (12.6%)" INGSGAGEAGASNGGDLIFAHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) TVDIVDETGEAAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" VTNYCSDHTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0030145 (25%) GO:0070006 (25%)" proteolysis (25%) cytosol (25%) "manganese ion binding (25%) metalloaminopeptidase activity (25%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" HLNIEQPQVGESWEISNVPGDESVVANGTEAGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (16.7%) IPR014628 (16.7%) IPR014710 (16.7%)" "RmlC-like cupin domain superfamily (16.7%) Mannose-6-phosphate isomerase, Firmicutes type, short form (16.7%) RmlC-like jelly roll fold (16.7%)" AAFDHNYASR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.5.1.4 (100%) inositol-3-phosphate synthase (100%) "GO:0006021 (33.3%) GO:0008654 (33.3%)" GO:0004512 (33.3%) "inositol biosynthetic process (33.3%) phospholipid biosynthetic process (33.3%)" inositol-3-phosphate synthase activity (33.3%) "IPR002587 (33.3%) IPR013021 (33.3%) IPR036291 (33.3%)" "Myo-inositol-1-phosphate synthase (33.3%) Myo-inositol-1-phosphate synthase, GAPDH-like (33.3%) NAD(P)-binding domain superfamily (33.3%)" GLLIHTNALIEGLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.28 (100%) D-lactate dehydrogenase (100%) "GO:0008720 (48%) GO:0051287 (48%) GO:0016787 (4%)" "D-lactate dehydrogenase (NAD+) activity (48%) NAD binding (48%) hydrolase activity (4%)" "IPR006139 (25%) IPR006140 (25%) IPR029753 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (25%)" KSPLTGGGLPGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (14.9%) GO:0006261 (10%)" "GO:0005737 (10.4%) GO:0005694 (10%)" "GO:0003677 (14.9%) GO:0005524 (14.9%) GO:0034335 (10%)" "DNA topological change (14.9%) DNA-templated DNA replication (10%)" "cytoplasm (10.4%) chromosome (10%)" "DNA binding (14.9%) ATP binding (14.9%) DNA negative supercoiling activity (10%)" "IPR000565 (8.1%) IPR001241 (8.1%) IPR006171 (8.1%)" "DNA topoisomerase, type IIA, subunit B (8.1%) DNA topoisomerase, type IIA (8.1%) TOPRIM domain (8.1%)" RFTIISDEVDDFVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR012912 (50%) IPR024047 (50%)" "Plasmid pRiA4b, Orf3-like domain (50%) MM3350-like superfamily (50%)" KGVDELANAVK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.3%) GO:0005737 (15.7%) "GO:0005524 (17.3%) GO:0140662 (17.3%) GO:0016853 (16.7%)" protein refolding (17.3%) cytoplasm (15.7%) "ATP binding (17.3%) ATP-dependent protein folding chaperone (17.3%) isomerase activity (16.7%)" "IPR001844 (17%) IPR002423 (17%) IPR027413 (16.9%)" "Chaperonin Cpn60/GroEL (17%) Chaperonin Cpn60/GroEL/TCP-1 family (17%) GroEL-like equatorial domain superfamily (16.9%)" LAMENTSTPTALIFSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.6%) IPR005475 (12.6%) IPR009014 (12.6%)" "Transketolase, N-terminal (12.6%) Transketolase-like, pyrimidine-binding domain (12.6%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.6%)" TLQCTGLIDLGR Bacteria Bacteria "2.7.1.95 (99.2%) 2.7.1.87 (0.8%)" "kanamycin kinase (99.2%) streptomycin 3''-kinase (0.8%)" "GO:0046677 (23.9%) GO:0019748 (0.1%)" "GO:0005524 (23.9%) GO:0046872 (19.9%) GO:0008910 (19.4%)" "response to antibiotic (23.9%) secondary metabolic process (0.1%)" "ATP binding (23.9%) metal ion binding (19.9%) kanamycin kinase activity (19.4%)" "IPR011009 (27.1%) IPR002575 (27%) IPR024165 (23.7%)" "Protein kinase-like domain superfamily (27.1%) Aminoglycoside phosphotransferase (27%) Aminoglycoside 3-phosphotransferase (23.7%)" ANVAIASALNTYNVLNAETLVVTENSLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.3%) "GO:0005840 (20.3%) GO:1990904 (20.3%)" "GO:0003735 (20.3%) GO:0019843 (17.4%) GO:0003723 (1.4%)" translation (20.3%) "ribosome (20.3%) ribonucleoprotein complex (20.3%)" "structural constituent of ribosome (20.3%) rRNA binding (17.4%) RNA binding (1.4%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" VSQEMFSSIWK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0030170 (33.3%) GO:0008184 (31.9%) GO:0004645 (1.4%)" carbohydrate metabolic process (33.3%) "pyridoxal phosphate binding (33.3%) glycogen phosphorylase activity (31.9%) 1,4-alpha-oligoglucan phosphorylase activity (1.4%)" "IPR011834 (25.4%) IPR052182 (25.4%) IPR024517 (24.7%)" "Alpha-glucan phosphorylase (25.4%) Glycogen_Maltodextrin_Phosphorylase (25.4%) Glycogen phosphorylase, domain of unknown function DUF3417 (24.7%)" AYFLPEGGYVVAETEEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (19.4%) GO:0005829 (19.4%) "GO:0002161 (20.4%) GO:0004832 (20.4%) GO:0005524 (20.4%)" valyl-tRNA aminoacylation (19.4%) cytosol (19.4%) "aminoacyl-tRNA deacylase activity (20.4%) valine-tRNA ligase activity (20.4%) ATP binding (20.4%)" "IPR001412 (9.1%) IPR002300 (9.1%) IPR002303 (9.1%)" "Aminoacyl-tRNA synthetase, class I, conserved site (9.1%) Aminoacyl-tRNA synthetase, class Ia (9.1%) Valine-tRNA ligase (9.1%)" LLEETYKDFVR Pseudomonadati Bacteria Pseudomonadati "3.4.15.5 (63.2%) 3.4.24.- (26.3%) 3.4.-.- (10.5%)" "peptidyl-dipeptidase Dcp (63.2%) Metalloendopeptidases (26.3%) Acting on peptide bonds (peptidases) (10.5%)" GO:0006508 (19.3%) GO:0005829 (19.3%) "GO:0004180 (19.3%) GO:0004222 (19.3%) GO:0046872 (19.3%)" proteolysis (19.3%) cytosol (19.3%) "carboxypeptidase activity (19.3%) metalloendopeptidase activity (19.3%) metal ion binding (19.3%)" "IPR001567 (17.3%) IPR024077 (17.3%) IPR024079 (17.3%)" "Peptidase M3A/M3B catalytic domain (17.3%) Neurolysin/Thimet oligopeptidase, domain 2 (17.3%) Metallopeptidase, catalytic domain superfamily (17.3%)" FTLYGEEHSLTINNGPNSLHGGPTGFHAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (20%) IPR011013 (20%) IPR014718 (20%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (20%) Galactose mutarotase-like domain superfamily (20%) Glycoside hydrolase-type carbohydrate-binding (20%)" SNQEPATILLIDDHPMLR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.7.13.3 (100%) histidine kinase (100%) "GO:0000160 (20.1%) GO:0006355 (19.3%) GO:0042128 (18.9%)" "GO:0005886 (0.4%) GO:0005829 (0.2%) GO:0032993 (0.2%)" "GO:0003677 (20.1%) GO:0000166 (17.7%) GO:0005524 (1.2%)" "phosphorelay signal transduction system (20.1%) regulation of DNA-templated transcription (19.3%) nitrate assimilation (18.9%)" "plasma membrane (0.4%) cytosol (0.2%) protein-DNA complex (0.2%)" "DNA binding (20.1%) nucleotide binding (17.7%) ATP binding (1.2%)" "IPR001789 (16.8%) IPR011006 (16.8%) IPR039420 (16.2%)" "Signal transduction response regulator, receiver domain (16.8%) CheY-like superfamily (16.8%) Transcriptional regulatory protein WalR-like (16.2%)" IKAANPTPEKPFVLGCPTGSSPLGMYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (13.6%) GO:0005737 (0.7%)" "GO:0004342 (14.3%) GO:0042802 (14.3%) GO:0016853 (0.2%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (13.6%) cytoplasm (0.7%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%) isomerase activity (0.2%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" IFESLGYHVTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.99.- (96.7%) 5.4.99.22 (3.3%)" "Transferring other groups (96.7%) 23S rRNA pseudouridine(2605) synthase (3.3%)" GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" LLNTMQPDAPGTLISNAIEKGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.3%) GO:0009090 (17.3%) GO:0009088 (13.5%)" GO:0005829 (17.3%) "GO:0004072 (17.3%) GO:0005524 (17.3%)" "lysine biosynthetic process via diaminopimelate (17.3%) homoserine biosynthetic process (17.3%) threonine biosynthetic process (13.5%)" cytosol (17.3%) "aspartate kinase activity (17.3%) ATP binding (17.3%)" "IPR001048 (14.3%) IPR001341 (14.3%) IPR005260 (14.3%)" "Aspartate/glutamate/uridylate kinase (14.3%) Aspartate kinase (14.3%) Aspartate kinase, monofunctional class (14.3%)" LKPILSDIKGWEAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005524 (24.5%) GO:0016887 (24.5%) GO:0051082 (24.5%)" "ATP binding (24.5%) ATP hydrolysis activity (24.5%) unfolded protein binding (24.5%)" "IPR001404 (14.3%) IPR003594 (14.3%) IPR019805 (14.3%)" "Heat shock protein Hsp90 family (14.3%) Histidine kinase/HSP90-like ATPase domain (14.3%) Heat shock protein Hsp90, conserved site (14.3%)" STIFPNMIGLTIAVHNGR root "GO:0000028 (16.6%) GO:0006412 (16.6%) GO:0002181 (0%)" "GO:0005737 (16.6%) GO:0015935 (16.5%) GO:0005840 (0.3%)" "GO:0003735 (16.6%) GO:0019843 (16.6%) GO:0000049 (0.1%)" "ribosomal small subunit assembly (16.6%) translation (16.6%) cytoplasmic translation (0%)" "cytoplasm (16.6%) small ribosomal subunit (16.5%) ribosome (0.3%)" "structural constituent of ribosome (16.6%) rRNA binding (16.6%) tRNA binding (0.1%)" "IPR002222 (24.8%) IPR023575 (24.8%) IPR005732 (24.8%)" "Small ribosomal subunit protein uS19 (24.8%) Small ribosomal subunit protein uS19, superfamily (24.8%) Small ribosomal subunit protein uS19, bacteria (24.8%)" SRIESGSLQDLIANK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (25%)" GO:0005737 (25%) GO:0004801 (25%) "carbohydrate metabolic process (25%) pentose-phosphate shunt (25%)" cytoplasm (25%) transaldolase activity (25%) "IPR001585 (25%) IPR004732 (25%) IPR013785 (25%)" "Transaldolase/Fructose-6-phosphate aldolase (25%) Transaldolase type 2 (25%) Aldolase-type TIM barrel (25%)" VAESAACAEKFER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR005763 (11.2%) IPR012888 (11.2%) IPR012889 (11.2%)" "L-fucose isomerase (11.2%) L-fucose isomerase, N-terminal-1 (11.2%) L-fucose isomerase, N-terminal-2 (11.2%)" DATPMFVYGVNHTSYAGQDIISNASCTTNCLAPIAK Parabacteroides gordonii MS-1 = DSM 23371 Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides gordonii Parabacteroides gordonii MS-1 = DSM 23371 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0004365 (16.7%) GO:0050661 (16.7%) GO:0051287 (16.7%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (16.7%) NADP binding (16.7%) NAD binding (16.7%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" RVVFSNLQDKLAVTELFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.3%) IPR036373 (33.3%) IPR047859 (33.3%)" "Large ribosomal subunit protein bL17 (33.3%) Large ribosomal subunit protein bL17 superfamily (33.3%) Large ribosomal subunit protein bL17, conserved site (33.3%)" VADGATVVSTSTR root "4.2.1.3 (51.9%) 4.2.1.99 (48.1%)" "aconitate hydratase (51.9%) 2-methylisocitrate dehydratase (48.1%)" "GO:0006099 (12.5%) GO:0019629 (12.5%) GO:0006097 (0%)" "GO:0005829 (12.5%) GO:0016020 (0%)" "GO:0003994 (12.6%) GO:0046872 (12.6%) GO:0047456 (12.5%)" "tricarboxylic acid cycle (12.5%) propionate catabolic process, 2-methylcitrate cycle (12.5%) glyoxylate cycle (0%)" "cytosol (12.5%) membrane (0%)" "aconitate hydratase activity (12.6%) metal ion binding (12.6%) 2-methylisocitrate dehydratase activity (12.5%)" "IPR001030 (9.3%) IPR015931 (9.3%) IPR036008 (9.3%)" "Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (9.3%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (9.3%) Aconitase, iron-sulfur domain (9.3%)" VDGIYTADPEKDPTATK root 2.7.4.22 (100%) UMP kinase (100%) "GO:0006225 (19.9%) GO:0044210 (19.9%) GO:0006412 (0.1%)" "GO:0005737 (19.8%) GO:0016020 (0.3%) GO:0005829 (0.1%)" "GO:0005524 (19.9%) GO:0033862 (19.9%) GO:0016301 (0.1%)" "UDP biosynthetic process (19.9%) 'de novo' CTP biosynthetic process (19.9%) translation (0.1%)" "cytoplasm (19.8%) membrane (0.3%) cytosol (0.1%)" "ATP binding (19.9%) UMP kinase activity (19.9%) kinase activity (0.1%)" "IPR001048 (25.1%) IPR015963 (25%) IPR036393 (25%)" "Aspartate/glutamate/uridylate kinase (25.1%) Uridylate kinase, bacteria (25%) Acetylglutamate kinase-like superfamily (25%)" ELAALNPHIVVK Bacteria Bacteria "2.2.1.2 (99%) 4.1.2.- (1%)" "transaldolase (99%) Aldehyde-lyases (1%)" "GO:0005975 (17.4%) GO:0006098 (16.4%) GO:0042182 (15.7%)" GO:0005737 (17%) "GO:0016832 (17%) GO:0004801 (16.4%) GO:0016829 (0.2%)" "carbohydrate metabolic process (17.4%) pentose-phosphate shunt (16.4%) ketone catabolic process (15.7%)" cytoplasm (17%) "aldehyde-lyase activity (17%) transaldolase activity (16.4%) lyase activity (0.2%)" "IPR001585 (17.1%) IPR013785 (17.1%) IPR033919 (16.8%)" "Transaldolase/Fructose-6-phosphate aldolase (17.1%) Aldolase-type TIM barrel (17.1%) Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial (16.8%)" VGFGFDVHQLVTGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.6.1.12 (100%) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (100%) "GO:0016114 (25%) GO:0019288 (25%)" "GO:0008685 (25%) GO:0046872 (25%)" "terpenoid biosynthetic process (25%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (25%)" "2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity (25%) metal ion binding (25%)" "IPR003526 (33.3%) IPR020555 (33.3%) IPR036571 (33.3%)" "2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (33.3%) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site (33.3%) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily (33.3%)" LTLNLNEPCKLEDTSWIKPVK Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.2.1.- (33.3%) 3.2.1.22 (33.3%) 3.2.1.3 (33.3%)" "Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (33.3%) alpha-galactosidase (33.3%) glucan 1,4-alpha-glucosidase (33.3%)" "GO:0030246 (64.4%) GO:0016787 (32.2%) GO:0004339 (1.7%)" "carbohydrate binding (64.4%) hydrolase activity (32.2%) glucan 1,4-alpha-glucosidase activity (1.7%)" "IPR013785 (14%) IPR014718 (14%) IPR017853 (14%)" "Aldolase-type TIM barrel (14%) Glycoside hydrolase-type carbohydrate-binding (14%) Glycoside hydrolase superfamily (14%)" ASWFSHKGEVATPYYYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.8%) GO:0006516 (19.8%)" GO:0005829 (19.8%) "GO:0000224 (19.8%) GO:0030246 (19.8%) GO:0016798 (1%)" "carbohydrate metabolic process (19.8%) glycoprotein catabolic process (19.8%)" cytosol (19.8%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.8%) carbohydrate binding (19.8%) hydrolase activity, acting on glycosyl bonds (1%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" QEAAPAAAPAPAAGVK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.3.1.12 (98.3%) 2.3.1.- (1.7%)" "dihydrolipoyllysine-residue acetyltransferase (98.3%) Transferring groups other than amino-acyl groups (1.7%)" "GO:0006086 (20.5%) GO:0006090 (0.2%) GO:0042867 (0.2%)" "GO:0005737 (20.5%) GO:0045254 (17.1%)" "GO:0031405 (20.5%) GO:0004742 (20%) GO:0016407 (0.7%)" "pyruvate decarboxylation to acetyl-CoA (20.5%) pyruvate metabolic process (0.2%) pyruvate catabolic process (0.2%)" "cytoplasm (20.5%) pyruvate dehydrogenase complex (17.1%)" "lipoic acid binding (20.5%) dihydrolipoyllysine-residue acetyltransferase activity (20%) acetyltransferase activity (0.7%)" "IPR000089 (12%) IPR003016 (12%) IPR011053 (12%)" "Biotin/lipoyl attachment (12%) 2-oxo acid dehydrogenase, lipoyl-binding site (12%) Single hybrid motif (12%)" SITKDQIIEAVSAMSVMDVVELISAMEEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0006412 (24.9%) "GO:0022625 (24.6%) GO:0005840 (0.6%) GO:1990904 (0.4%)" "GO:0003735 (24.9%) GO:0003729 (24.6%)" translation (24.9%) "cytosolic large ribosomal subunit (24.6%) ribosome (0.6%) ribonucleoprotein complex (0.4%)" "structural constituent of ribosome (24.9%) mRNA binding (24.6%)" "IPR008932 (20.2%) IPR036235 (20.2%) IPR000206 (19.9%)" "Large ribosomal subunit protein bL12, oligomerization (20.2%) Large ribosomal subunit protein bL12, oligomerization domain superfamily (20.2%) Large ribosomal subunit protein bL12 (19.9%)" DFNEALVHQVVVAYAAGAR root "GO:0006412 (19.9%) GO:0006353 (0.2%) GO:0006417 (0.1%)" "GO:0005840 (20.2%) GO:1990904 (19.8%) GO:0022625 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.5%) GO:0001070 (0%)" "translation (19.9%) DNA-templated transcription termination (0.2%) regulation of translation (0.1%)" "ribosome (20.2%) ribonucleoprotein complex (19.8%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.5%) RNA-binding transcription regulator activity (0%)" "IPR002136 (33.2%) IPR023574 (33.2%) IPR013005 (33.1%)" "Large ribosomal subunit protein uL4 (33.2%) Large ribosomal subunit protein uL4 domain superfamily (33.2%) Large ribosomal subunit protein uL4-like (33.1%)" AHQQNIVPVVHEALKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.234 (100%) N(6)-L-threonylcarbamoyladenine synthase (100%) "GO:0002949 (22%) GO:0006508 (4.3%) GO:0006400 (0.1%)" GO:0005737 (22%) "GO:0005506 (20.5%) GO:0061711 (19.3%) GO:0008233 (4.3%)" "tRNA threonylcarbamoyladenosine modification (22%) proteolysis (4.3%) tRNA modification (0.1%)" cytoplasm (22%) "iron ion binding (20.5%) tRNA N(6)-L-threonylcarbamoyladenine synthase activity (19.3%) peptidase activity (4.3%)" "IPR000905 (20.1%) IPR017861 (20.1%) IPR043129 (20.1%)" "Gcp-like domain (20.1%) Kae1/TsaD family (20.1%) ATPase, nucleotide binding domain (20.1%)" LDSTAHLYSFDQDEDAEKNIVSDSR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.1.1.199 (100%) 16S rRNA (cytosine(1402)-N(4))-methyltransferase (100%) GO:0070475 (33.3%) GO:0005737 (33.3%) GO:0071424 (33.3%) rRNA base methylation (33.3%) cytoplasm (33.3%) rRNA (cytosine-N4-)-methyltransferase activity (33.3%) "IPR002903 (33.3%) IPR023397 (33.3%) IPR029063 (33.3%)" "Ribosomal RNA small subunit methyltransferase H (33.3%) S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily (33.3%) S-adenosyl-L-methionine-dependent methyltransferase superfamily (33.3%)" VVMPHDHHHVLATYHK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (25%) GO:0009898 (25%) "GO:0003842 (25%) GO:0004657 (25%)" L-proline catabolic process to L-glutamate (25%) cytoplasmic side of plasma membrane (25%) "L-glutamate gamma-semialdehyde dehydrogenase activity (25%) proline dehydrogenase activity (25%)" "IPR005931 (14.3%) IPR015590 (14.3%) IPR016160 (14.3%)" "Delta-1-pyrroline-5-carboxylate dehydrogenase (14.3%) Aldehyde dehydrogenase domain (14.3%) Aldehyde dehydrogenase, cysteine active site (14.3%)" GTEFHPGNNIGMGKDHTLFALVDGTVNFK IISPGTVIVSAGGEVSDVKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (18.7%) GO:0006164 (2.1%)" GO:0005737 (20.9%) "GO:0004642 (20.9%) GO:0005524 (18.7%) GO:0046872 (18.7%)" "'de novo' IMP biosynthetic process (18.7%) purine nucleotide biosynthetic process (2.1%)" cytoplasm (20.9%) "phosphoribosylformylglycinamidine synthase activity (20.9%) ATP binding (18.7%) metal ion binding (18.7%)" "IPR010918 (11.7%) IPR036676 (11.7%) IPR036921 (11.7%)" "PurM-like, C-terminal domain (11.7%) PurM-like, C-terminal domain superfamily (11.7%) PurM-like, N-terminal domain superfamily (11.7%)" YCKPNEGEDFKNRPEKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR004216 (11.1%) IPR005763 (11.1%) IPR009015 (11.1%)" "L-fucose/L-arabinose isomerase, C-terminal (11.1%) L-fucose isomerase (11.1%) L-fucose isomerase, N-terminal/central domain superfamily (11.1%)" ISSIEPNLITDEAIDFVAHSKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.-.-.- (100%) Transferases (100%) GO:0005737 (25%) "GO:0035598 (25%) GO:0046872 (25%) GO:0051539 (25%)" cytoplasm (25%) "tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity (25%) metal ion binding (25%) 4 iron, 4 sulfur cluster binding (25%)" "IPR005839 (12.5%) IPR006467 (12.5%) IPR006638 (12.5%)" "Methylthiotransferase (12.5%) MiaB-like tRNA modifying enzyme, bacteria (12.5%) Elp3/MiaA/NifB-like, radical SAM core domain (12.5%)" LKAPLALPAPMTEYEFAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.6%) "GO:0005829 (16.6%) GO:0005960 (16.6%)" "GO:0004375 (16.6%) GO:0016594 (16.6%) GO:0030170 (16.6%)" glycine decarboxylation via glycine cleavage system (16.6%) "cytosol (16.6%) glycine cleavage complex (16.6%)" "glycine dehydrogenase (decarboxylating) activity (16.6%) glycine binding (16.6%) pyridoxal phosphate binding (16.6%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" QIGQTGVTVRPK Pseudomonadati Bacteria Pseudomonadati 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) GO:0033539 (32.8%) "GO:0009055 (32.8%) GO:0050660 (32.8%) GO:0016491 (1.6%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (32.8%) "electron transfer activity (32.8%) flavin adenine dinucleotide binding (32.8%) oxidoreductase activity (1.6%)" "IPR001308 (16.4%) IPR014731 (16.4%) IPR029035 (16.4%)" "Electron transfer flavoprotein alpha subunit/FixB (16.4%) Electron transfer flavoprotein, alpha subunit, C-terminal (16.4%) DHS-like NAD/FAD-binding domain superfamily (16.4%)" ALYEELDDAAK IVSVTHVSNVLGTVNPVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.8.1.7 (100%) cysteine desulfurase (100%) GO:0006534 (31.6%) "GO:0030170 (31.6%) GO:0031071 (31.6%) GO:0008483 (3.5%)" cysteine metabolic process (31.6%) "pyridoxal phosphate binding (31.6%) cysteine desulfurase activity (31.6%) transaminase activity (3.5%)" "IPR000192 (16.5%) IPR010970 (16.5%) IPR015421 (16.5%)" "Aminotransferase class V domain (16.5%) Cysteine desulfurase, SufS (16.5%) Pyridoxal phosphate-dependent transferase, major domain (16.5%)" KSVVTGVEMFRK root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0%) GO:0032790 (0%) GO:0070125 (0%)" "GO:0005829 (17.8%) GO:0032045 (5.3%) GO:0005737 (0.3%)" "GO:0003746 (18.3%) GO:0005525 (18.2%) GO:0003924 (17.9%)" "translational elongation (0%) ribosome disassembly (0%) mitochondrial translational elongation (0%)" "cytosol (17.8%) guanyl-nucleotide exchange factor complex (5.3%) cytoplasm (0.3%)" "translation elongation factor activity (18.3%) GTP binding (18.2%) GTPase activity (17.9%)" "IPR004161 (8.5%) IPR009000 (8.4%) IPR050055 (8.4%)" "Translation elongation factor EFTu-like, domain 2 (8.5%) Translation protein, beta-barrel domain superfamily (8.4%) Elongation factor Tu GTPase (8.4%)" AEYSHLDVDEPSKEDRDFVTAVLNMYR Escherichia coli Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli "IPR005587 (50%) IPR023146 (50%)" "Uncharacterised protein family UPF0304, YfbU (50%) YfbU, alpha-helical bundle domain superfamily (50%)" VTGYASPEGGYDYNMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016020 (100%) membrane (100%) "IPR006665 (17.1%) IPR011990 (17.1%) IPR019734 (17.1%)" "OmpA-like domain (17.1%) Tetratricopeptide-like helical domain superfamily (17.1%) Tetratricopeptide repeat (17.1%)" GWLVQDQKECYYVYAQTMNGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR008323 (100%) Uncharacterised conserved protein UCP033563 (100%) EVAAAEDPKACAAEKEAEYKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.-.-.- (100%) Ligases (100%) GO:0015977 (23.1%) GO:0009317 (23.1%) "GO:0003989 (23.1%) GO:0004658 (23.1%) GO:0016740 (7.7%)" carbon fixation (23.1%) acetyl-CoA carboxylase complex (23.1%) "acetyl-CoA carboxylase activity (23.1%) propionyl-CoA carboxylase activity (23.1%) transferase activity (7.7%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" NTGIDKVTVLTTLEAFMDTVKDSLSKEENVYLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (50%) IPR010992 (50%)" "Histone-like DNA-binding protein (50%) Integration host factor (IHF)-like DNA-binding domain superfamily (50%)" ESTTDKIDDAMDELGDDYTEDEIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.6.2.4 (95%) 3.6.4.12 (5%)" "DNA 3'-5' helicase (95%) DNA helicase (5%)" "GO:0006260 (8.3%) GO:0006281 (8.3%) GO:0006310 (8.3%)" "GO:0005737 (8.3%) GO:0030894 (8.3%) GO:0043590 (8.3%)" "GO:0003677 (8.3%) GO:0005524 (8.3%) GO:0009378 (8.3%)" "DNA replication (8.3%) DNA repair (8.3%) DNA recombination (8.3%)" "cytoplasm (8.3%) replisome (8.3%) bacterial nucleoid (8.3%)" "DNA binding (8.3%) ATP binding (8.3%) four-way junction helicase activity (8.3%)" "IPR001650 (7.1%) IPR002121 (7.1%) IPR004589 (7.1%)" "Helicase, C-terminal domain-like (7.1%) HRDC domain (7.1%) DNA helicase, ATP-dependent, RecQ type (7.1%)" GTPEFWIANVHPGR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (20%) GO:0022625 (20%) "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) cytosolic large ribosomal subunit (20%) "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000114 (20%) IPR016180 (20%) IPR020798 (20%)" "Large ribosomal subunit protein uL16, bacteria (20%) Large ribosomal subunit protein uL16 domain (20%) Large ribosomal subunit protein uL16, conserved site (20%)" NLGGDPTNPFQIFPEVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" AHDYFTMGGQDMNEAYNMFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" AFVFPGQGAQFVGMGKDLYETSALAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) "GO:0004314 (95%) GO:0016746 (5%)" "[acyl-carrier-protein] S-malonyltransferase activity (95%) acyltransferase activity (5%)" "IPR001227 (14.3%) IPR004410 (14.3%) IPR014043 (14.3%)" "Acyl transferase domain superfamily (14.3%) Malonyl CoA-acyl carrier protein transacylase, FabD-type (14.3%) Acyl transferase domain (14.3%)" VYEQNEIEFLPVNAENAADQLMIAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" NTYASPEQWQEKAETLAK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.2%) GO:0005829 (18.2%) "GO:0004612 (18.2%) GO:0005524 (18.2%) GO:0046872 (15.7%)" gluconeogenesis (18.2%) cytosol (18.2%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.2%) ATP binding (18.2%) metal ion binding (15.7%)" "IPR001272 (26.5%) IPR013035 (26.5%) IPR015994 (23.6%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (26.5%) Phosphoenolpyruvate carboxykinase, C-terminal (26.5%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (23.6%)" ALGFGDDHYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.7%) GO:0015966 (12%) GO:0044281 (0.6%)" "GO:0005737 (12.7%) GO:0070062 (12%) GO:1990742 (12%)" "GO:0004820 (12.7%) GO:0005524 (12.7%) GO:0004081 (12%)" "glycyl-tRNA aminoacylation (12.7%) diadenosine tetraphosphate biosynthetic process (12%) small molecule metabolic process (0.6%)" "cytoplasm (12.7%) extracellular exosome (12%) microvesicle (12%)" "glycine-tRNA ligase activity (12.7%) ATP binding (12.7%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12%)" "IPR027031 (11.3%) IPR045864 (11.3%) IPR002314 (11.2%)" "Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 (11.3%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.3%) Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.2%)" ELDECSERPGEFVSIEGDLR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006289 (12.5%) "GO:0005737 (12.5%) GO:0009380 (12.5%)" "GO:0003677 (12.5%) GO:0004518 (12.5%) GO:0005524 (12.5%)" nucleotide-excision repair (12.5%) "cytoplasm (12.5%) excinuclease repair complex (12.5%)" "DNA binding (12.5%) nuclease activity (12.5%) ATP binding (12.5%)" "IPR003439 (14.3%) IPR004602 (14.3%) IPR013815 (14.3%)" "ABC transporter-like, ATP-binding domain (14.3%) UvrABC system subunit A (14.3%) ATP-grasp fold, subdomain 1 (14.3%)" ASEALEGLKGDNEDETTGIEIIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.7%) GO:0005737 (15.6%) "GO:0005524 (17.7%) GO:0140662 (17.7%) GO:0016853 (15.6%)" protein refolding (17.7%) cytoplasm (15.6%) "ATP binding (17.7%) ATP-dependent protein folding chaperone (17.7%) isomerase activity (15.6%)" "IPR001844 (17.3%) IPR002423 (17.3%) IPR018370 (17.3%)" "Chaperonin Cpn60/GroEL (17.3%) Chaperonin Cpn60/GroEL/TCP-1 family (17.3%) Chaperonin Cpn60, conserved site (17.3%)" MIGTDPNSDLALVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.21.107 (100%) peptidase Do (100%) GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001478 (25%) IPR001940 (25%) IPR009003 (25%)" "PDZ domain (25%) Peptidase S1C (25%) Peptidase S1, PA clan (25%)" GHKFEFPVYWGVDLASEHER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.3%) GO:0005737 (19.2%) "GO:0005524 (20.3%) GO:0004816 (19.9%) GO:0003676 (19.7%)" asparaginyl-tRNA aminoacylation (20.3%) cytoplasm (19.2%) "ATP binding (20.3%) asparagine-tRNA ligase activity (19.9%) nucleic acid binding (19.7%)" "IPR004364 (14.5%) IPR045864 (14.5%) IPR002312 (14.3%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (14.5%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.5%) Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.3%)" MIYSHEVQHMCVVKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales SAICFEAQCFPDTPNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.1.3.3 (95.2%) 5.1.3.- (4.8%)" "aldose 1-epimerase (95.2%) Acting on carbohydrates and derivatives (4.8%)" "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (20.1%) IPR011013 (20.1%) IPR014718 (20.1%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (20.1%) Galactose mutarotase-like domain superfamily (20.1%) Glycoside hydrolase-type carbohydrate-binding (20.1%)" ENQGGTCVPVSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016020 (100%) membrane (100%) "IPR011990 (25%) IPR019734 (25%) IPR021280 (25%)" "Tetratricopeptide-like helical domain superfamily (25%) Tetratricopeptide repeat (25%) Protein O-mannosyl-transferase TMEM260-like (25%)" VTAVEAKEDGIYVTMEGK root "1.8.1.4 (99.5%) 1.-.-.- (0.2%) 1.8.1.7 (0.2%)" "dihydrolipoyl dehydrogenase (99.5%) Oxidoreductases (0.2%) glutathione-disulfide reductase (0.2%)" "GO:0006103 (20.3%) GO:0006979 (19.6%) GO:0006090 (0.1%)" "GO:0005737 (18%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0004148 (20.5%) GO:0050660 (20.5%) GO:0016491 (0.3%)" "2-oxoglutarate metabolic process (20.3%) response to oxidative stress (19.6%) pyruvate metabolic process (0.1%)" "cytoplasm (18%) cytosol (0.1%) plasma membrane (0.1%)" "dihydrolipoyl dehydrogenase (NADH) activity (20.5%) flavin adenine dinucleotide binding (20.5%) oxidoreductase activity (0.3%)" "IPR036188 (12.9%) IPR023753 (12.8%) IPR050151 (12.8%)" "FAD/NAD(P)-binding domain superfamily (12.9%) FAD/NAD(P)-binding domain (12.8%) Class-I pyridine nucleotide-disulfide oxidoreductase (12.8%)" IADDFSNDAKTDFAPVDQIPDGWEGLDIGPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" EKVQVIINTWYGGEMK Pseudomonadati Bacteria Pseudomonadati 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.5%) GO:0005829 (17.5%) "GO:0004612 (17.5%) GO:0005524 (17.5%) GO:0046872 (17.5%)" gluconeogenesis (17.5%) cytosol (17.5%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.5%) ATP binding (17.5%) metal ion binding (17.5%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" NQFDFNDFISQIQQIKK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) "GO:0048500 (19%) GO:0005786 (1%)" "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (20%)" SRP-dependent cotranslational protein targeting to membrane (20%) "signal recognition particle (19%) signal recognition particle, endoplasmic reticulum targeting (1%)" "GTPase activity (20%) GTP binding (20%) 7S RNA binding (20%)" "IPR000897 (11.1%) IPR003593 (11.1%) IPR004125 (11.1%)" "Signal recognition particle, SRP54 subunit, GTPase domain (11.1%) AAA+ ATPase domain (11.1%) Signal recognition particle, SRP54 subunit, M-domain (11.1%)" NSTLLPYQDFDPLLGDQYVIPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" SLKDNGCIAYDIFESSTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.-.-.- (100%) Oxidoreductases (100%) "GO:0004497 (66.7%) GO:0003824 (33.3%)" "monooxygenase activity (66.7%) catalytic activity (33.3%)" "IPR007138 (33.3%) IPR011008 (33.3%) IPR050744 (33.3%)" "Antibiotic biosynthesis monooxygenase domain (33.3%) Dimeric alpha-beta barrel (33.3%) AI-2 Signaling Cycle Isomerase LsrG (33.3%)" EGNYYAAVEGSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "7.1.1.- (95.8%) 1.6.5.11 (4.2%)" "Hydron translocation or charge separation linked to oxidoreductase reactions (95.8%) Transferred entry: 1.6.5.9 (4.2%)" "GO:0005886 (15.3%) GO:0030964 (12%) GO:0005737 (11.3%)" "GO:0008137 (15.3%) GO:0048038 (15.3%) GO:0050136 (15.3%)" "plasma membrane (15.3%) NADH dehydrogenase complex (12%) cytoplasm (11.3%)" "NADH dehydrogenase (ubiquinone) activity (15.3%) quinone binding (15.3%) NADH dehydrogenase (quinone) (non-electrogenic) activity (15.3%)" "IPR001135 (16.8%) IPR001268 (16.8%) IPR022885 (16.8%)" "NADH-quinone oxidoreductase, subunit D (16.8%) NADH:ubiquinone oxidoreductase, 30kDa subunit (16.8%) NAD(P)H-quinone oxidoreductase subunit D/H (16.8%)" DYIKEFWNVVNWDEAAAR root 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0019430 (0.1%) GO:0006801 (0.1%) GO:0006979 (0.1%)" "GO:0005737 (32.9%) GO:0005829 (0.1%)" "GO:0004784 (33.1%) GO:0030145 (31.9%) GO:0046872 (1.1%)" "removal of superoxide radicals (0.1%) superoxide metabolic process (0.1%) response to oxidative stress (0.1%)" "cytoplasm (32.9%) cytosol (0.1%)" "superoxide dismutase activity (33.1%) manganese ion binding (31.9%) metal ion binding (1.1%)" "IPR019832 (16.9%) IPR036314 (16.9%) IPR019833 (16.7%)" "Manganese/iron superoxide dismutase, C-terminal (16.9%) Manganese/iron superoxide dismutase, C-terminal domain superfamily (16.9%) Manganese/iron superoxide dismutase, binding site (16.7%)" LVDIVEPTEK root "GO:0006412 (19.9%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0005840 (20.1%) GO:1990904 (19.8%) GO:0015935 (0.1%)" "GO:0003735 (19.9%) GO:0000049 (19.8%) GO:0003723 (0.1%)" "translation (19.9%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (20.1%) ribonucleoprotein complex (19.8%) small ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) tRNA binding (19.8%) RNA binding (0.1%)" "IPR027486 (25%) IPR001848 (24.9%) IPR036838 (24.9%)" "Small ribosomal subunit protein uS10 domain (25%) Small ribosomal subunit protein uS10 (24.9%) Small ribosomal subunit protein uS10 domain superfamily (24.9%)" AVTGQPTLIIGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.2.1.1 (96%) 2.2.1.- (4%)" "transketolase (96%) Transketolases and transaldolases (4%)" GO:0006098 (24.7%) GO:0005829 (24.7%) "GO:0004802 (24.7%) GO:0046872 (24.7%) GO:0047896 (1%)" pentose-phosphate shunt (24.7%) cytosol (24.7%) "transketolase activity (24.7%) metal ion binding (24.7%) formaldehyde transketolase activity (1%)" "IPR005474 (12.6%) IPR005475 (12.6%) IPR009014 (12.6%)" "Transketolase, N-terminal (12.6%) Transketolase-like, pyrimidine-binding domain (12.6%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.6%)" ICSIPHPSYHEEQLAEYIVGWAK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) "GO:0006508 (24.9%) GO:0043171 (0.2%)" GO:0005829 (24.9%) "GO:0070573 (24.9%) GO:0046872 (24.1%) GO:0016805 (0.5%)" "proteolysis (24.9%) peptide catabolic process (0.2%)" cytosol (24.9%) "metallodipeptidase activity (24.9%) metal ion binding (24.1%) dipeptidase activity (0.5%)" "IPR001160 (35.7%) IPR002933 (33.5%) IPR011650 (30.8%)" "Peptidase M20C, Xaa-His dipeptidase (35.7%) Peptidase M20 (33.5%) Peptidase M20, dimerisation domain (30.8%)" YIVNPTSAELEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (8.3%) IPR003029 (8.3%) IPR004087 (8.3%)" "Exoribonuclease, phosphorolytic domain 1 (8.3%) S1 domain (8.3%) K Homology domain (8.3%)" ELWMEREDFMEDAPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.18 (100%) glutamine--tRNA ligase (100%) "GO:0006425 (24.8%) GO:0006424 (1%)" GO:0005829 (24.8%) "GO:0004819 (24.8%) GO:0005524 (24.8%)" "glutaminyl-tRNA aminoacylation (24.8%) glutamyl-tRNA aminoacylation (1%)" cytosol (24.8%) "glutamine-tRNA ligase activity (24.8%) ATP binding (24.8%)" "IPR011035 (10.3%) IPR020056 (10.3%) IPR020059 (10.3%)" "Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (10.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (10.3%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain (10.3%)" VGTVLECEVVPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004825 (16.7%) GO:0005524 (16.7%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) methionine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002547 (8.5%) IPR004495 (8.5%) IPR023458 (8.5%)" "tRNA-binding domain (8.5%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.5%) Methionine-tRNA ligase, type 1 (8.5%)" GELLPCVFHVSAR root "1.2.7.1 (88.2%) 1.2.7.- (8.2%) 1.2.1.51 (2.7%)" "pyruvate synthase (88.2%) With an iron-sulfur protein as acceptor (8.2%) pyruvate dehydrogenase (NADP(+)) (2.7%)" "GO:0006979 (15.8%) GO:0022900 (15.1%) GO:0044281 (7.9%)" "GO:0051539 (15.4%) GO:0005506 (15.1%) GO:0030976 (14.5%)" "response to oxidative stress (15.8%) electron transport chain (15.1%) small molecule metabolic process (7.9%)" "4 iron, 4 sulfur cluster binding (15.4%) iron ion binding (15.1%) thiamine pyrophosphate binding (14.5%)" "IPR002880 (8%) IPR029061 (8%) IPR050722 (8%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (8%) Thiamin diphosphate-binding fold (8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (8%)" MDKAEEEAINAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" NMIVTDDVIESPQSIVIPEAANR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.1.3.11 (88.6%) 2.1.3.9 (11.4%)" "N-succinylornithine carbamoyltransferase (88.6%) N-acetylornithine carbamoyltransferase (11.4%)" "GO:0019240 (24.4%) GO:0042450 (24.4%) GO:0006526 (0.3%)" "GO:0004585 (24.4%) GO:0016597 (24.4%) GO:0043857 (2.1%)" "citrulline biosynthetic process (24.4%) L-arginine biosynthetic process via ornithine (24.4%) L-arginine biosynthetic process (0.3%)" "ornithine carbamoyltransferase activity (24.4%) amino acid binding (24.4%) N-acetylornithine carbamoyltransferase activity (2.1%)" "IPR006130 (20%) IPR006131 (20%) IPR006132 (20%)" "Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20%)" IVSLLDKINPNALLIGFGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.1%) "GO:0008184 (33.1%) GO:0030170 (33.1%) GO:0016757 (0.8%)" carbohydrate metabolic process (33.1%) "glycogen phosphorylase activity (33.1%) pyridoxal phosphate binding (33.1%) glycosyltransferase activity (0.8%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" AAGYELGKDITLAMDCAASEFYKDGK root "4.2.1.11 (99.9%) 6.3.4.2 (0.1%)" "phosphopyruvate hydratase (99.9%) CTP synthase (glutamine hydrolyzing) (0.1%)" "GO:0006096 (16.7%) GO:0006396 (0%) GO:0006401 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (15.9%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" "glycolytic process (16.7%) RNA processing (0%) RNA catabolic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (15.9%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020810 (16.8%) IPR036849 (16.8%)" "Enolase (16.8%) Enolase, C-terminal TIM barrel domain (16.8%) Enolase-like, C-terminal domain superfamily (16.8%)" YEQSGELHGLTR root 6.1.1.3 (100%) threonine--tRNA ligase (100%) "GO:0006435 (16.5%) GO:0006413 (0%) GO:0043039 (0%)" GO:0005737 (16.5%) "GO:0004829 (16.5%) GO:0005524 (16.5%) GO:0046872 (16.5%)" "threonyl-tRNA aminoacylation (16.5%) translational initiation (0%) tRNA aminoacylation (0%)" cytoplasm (16.5%) "threonine-tRNA ligase activity (16.5%) ATP binding (16.5%) metal ion binding (16.5%)" "IPR002314 (7.8%) IPR002320 (7.8%) IPR006195 (7.8%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.8%) Threonine-tRNA ligase, class IIa (7.8%) Aminoacyl-tRNA synthetase, class II (7.8%)" FGIPMFYGGPSAAFFATK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" YMPDFHMEYKVDPLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.103 (50%) 4.2.1.47 (50%)" "L-threonine 3-dehydrogenase (50%) GDP-mannose 4,6-dehydratase (50%)" GO:0006567 (48.4%) "GO:0008743 (48.4%) GO:0016829 (3.2%)" L-threonine catabolic process (48.4%) "L-threonine 3-dehydrogenase activity (48.4%) lyase activity (3.2%)" "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" AALSMTIPTGTGIHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0047850 (25%) GO:0000166 (24.8%) GO:0016491 (0.2%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "diaminopimelate dehydrogenase activity (25%) nucleotide binding (24.8%) oxidoreductase activity (0.2%)" "IPR010190 (25%) IPR032094 (25%) IPR036291 (25%)" "Diaminopimelate dehydrogenase, Ddh (25%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25%) NAD(P)-binding domain superfamily (25%)" IGTTPGLVYEQASVAPNSETPHR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) GO:0005975 (50%) GO:0004563 (50%) carbohydrate metabolic process (50%) beta-N-acetylhexosaminidase activity (50%) "IPR015882 (16.7%) IPR015883 (16.7%) IPR017853 (16.7%)" "Beta-hexosaminidase, bacterial type, N-terminal (16.7%) Glycoside hydrolase family 20, catalytic domain (16.7%) Glycoside hydrolase superfamily (16.7%)" RFAENEEVVVTANQFDRDLAAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (9.9%) GO:0008564 (1.2%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (9.9%) protein-exporting ATPase activity (1.2%)" "IPR000185 (8.3%) IPR011115 (8.3%) IPR014018 (8.3%)" "Protein translocase subunit SecA (8.3%) SecA DEAD-like, N-terminal (8.3%) SecA motor DEAD (8.3%)" NISLNIDKVAGFVSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.2%) GO:0006096 (14.2%) GO:0051156 (14.2%)" GO:0005829 (14.2%) "GO:0004347 (14.2%) GO:0048029 (14.2%) GO:0097367 (14.2%)" "gluconeogenesis (14.2%) glycolytic process (14.2%) glucose 6-phosphate metabolic process (14.2%)" cytosol (14.2%) "glucose-6-phosphate isomerase activity (14.2%) monosaccharide binding (14.2%) carbohydrate derivative binding (14.2%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" IAEEEGFPAIAVAFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005506 (50%) GO:0016491 (25%) GO:0016692 (18.8%)" "iron ion binding (50%) oxidoreductase activity (25%) NADH peroxidase activity (18.8%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" TVPVGGKFEGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0030145 (25%) GO:0070006 (25%)" proteolysis (25%) cytosol (25%) "manganese ion binding (25%) metalloaminopeptidase activity (25%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" NACWVPGTDHASIATEAK root "6.1.1.9 (99.9%) 4.2.1.47 (0.1%)" "valine--tRNA ligase (99.9%) GDP-mannose 4,6-dehydratase (0.1%)" "GO:0006438 (20%) GO:0005975 (0%) GO:0006508 (0%)" "GO:0005829 (20%) GO:0016020 (0%)" "GO:0004832 (20%) GO:0005524 (20%) GO:0002161 (19.8%)" "valyl-tRNA aminoacylation (20%) carbohydrate metabolic process (0%) proteolysis (0%)" "cytosol (20%) membrane (0%)" "valine-tRNA ligase activity (20%) ATP binding (20%) aminoacyl-tRNA deacylase activity (19.8%)" "IPR002300 (9.2%) IPR002303 (9.2%) IPR014729 (9.2%)" "Aminoacyl-tRNA synthetase, class Ia (9.2%) Valine-tRNA ligase (9.2%) Rossmann-like alpha/beta/alpha sandwich fold (9.2%)" MDPYVDLFQSHGGSMIMIAK Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) "GO:0006099 (18.7%) GO:0006091 (2%)" "GO:0004333 (20.7%) GO:0046872 (20.7%) GO:0051539 (20.7%)" "tricarboxylic acid cycle (18.7%) generation of precursor metabolites and energy (2%)" "fumarate hydratase activity (20.7%) metal ion binding (20.7%) 4 iron, 4 sulfur cluster binding (20.7%)" "IPR004647 (16.7%) IPR020557 (16.7%) IPR036660 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Fumarate lyase, conserved site (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (16.7%)" ILSLGDNDEDILKNEWVSGASILR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.6%) IPR012910 (12.6%) IPR023996 (12.6%)" "TonB-dependent receptor-like, beta-barrel (12.6%) TonB-dependent receptor, plug domain (12.6%) TonB-dependent outer membrane protein, SusC/RagA (12.6%)" ETQEIADKLIQDGYNADSLHGELSQAQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.6.4.13 (95.1%) 3.6.4.- (4.9%)" "RNA helicase (95.1%) Acting on ATP; involved in cellular and subcellular movement (4.9%)" "GO:0009266 (6.4%) GO:0042255 (6.4%)" GO:0005829 (16.5%) "GO:0003724 (17.7%) GO:0005524 (17.7%) GO:0016787 (17.4%)" "response to temperature stimulus (6.4%) ribosome assembly (6.4%)" cytosol (16.5%) "RNA helicase activity (17.7%) ATP binding (17.7%) hydrolase activity (17.4%)" "IPR000629 (11.1%) IPR001650 (11.1%) IPR005580 (11.1%)" "ATP-dependent RNA helicase DEAD-box, conserved site (11.1%) Helicase, C-terminal domain-like (11.1%) DEAD box helicase DbpA/CsdA, RNA-binding domain (11.1%)" DATAAVDAVFGSIQDSLSKGDK Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus "GO:0006270 (11%) GO:0010467 (11%) GO:0030261 (11%)" "GO:0005829 (11%) GO:1990103 (11%) GO:1990178 (11%)" "GO:0003677 (11.9%) GO:0030527 (11%) GO:0042802 (11%)" "DNA replication initiation (11%) gene expression (11%) chromosome condensation (11%)" "cytosol (11%) DnaA-HU complex (11%) HU-DNA complex (11%)" "DNA binding (11.9%) structural constituent of chromatin (11%) identical protein binding (11%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" NTTIIIPEHNIPAFKPAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0030261 (24.9%) GO:0005829 (24.9%) "GO:0003677 (25.2%) GO:0030527 (24.9%)" chromosome condensation (24.9%) cytosol (24.9%) "DNA binding (25.2%) structural constituent of chromatin (24.9%)" "IPR000119 (50%) IPR010992 (50%)" "Histone-like DNA-binding protein (50%) Integration host factor (IHF)-like DNA-binding domain superfamily (50%)" HGYELVNADGEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (15.3%) GO:0032259 (11.3%)" "GO:0005829 (15.3%) GO:0005960 (15.3%)" "GO:0004047 (15.3%) GO:0008483 (15.3%) GO:0008168 (11.3%)" "glycine decarboxylation via glycine cleavage system (15.3%) methylation (11.3%)" "cytosol (15.3%) glycine cleavage complex (15.3%)" "aminomethyltransferase activity (15.3%) transaminase activity (15.3%) methyltransferase activity (11.3%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" ANVIVSGGSEAAIAAAGVGGFNAMHALSTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" RLQAFEGVVIAIR root "GO:0006412 (32.9%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (32.9%) GO:0005840 (0.6%) GO:0005829 (0.1%)" "GO:0003735 (33%) GO:0016740 (0.1%) GO:0016301 (0%)" "translation (32.9%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (32.9%) ribosome (0.6%) cytosol (0.1%)" "structural constituent of ribosome (33%) transferase activity (0.1%) kinase activity (0%)" "IPR001857 (25%) IPR008991 (25%) IPR038657 (25%)" "Large ribosomal subunit protein bL19 (25%) Translation protein SH3-like domain superfamily (25%) Large ribosomal subunit protein bL19 superfamily (25%)" FNLPSELIALHPAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.99.17 (100%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (100%) "GO:0002099 (30.8%) GO:0008616 (7.7%)" GO:0005737 (30.8%) GO:0051075 (30.8%) "tRNA wobble guanine modification (30.8%) tRNA queuosine(34) biosynthetic process (7.7%)" cytoplasm (30.8%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity (30.8%) "IPR003699 (25%) IPR036100 (25%) IPR042118 (25%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA (25%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily (25%) QueA, domain 1 (25%)" MKVDAPVDAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (58.7%) IPR019734 (39.1%) IPR036737 (2.2%)" "Tetratricopeptide-like helical domain superfamily (58.7%) Tetratricopeptide repeat (39.1%) OmpA-like domain superfamily (2.2%)" EAGQTEDWVASQIEAALAGLSADQVK Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%) GO:0019563 (16.5%)" GO:0005829 (16.5%) "GO:0004807 (16.5%) GO:0016853 (0.7%)" "gluconeogenesis (16.5%) glycolytic process (16.5%) glycerol catabolic process (16.5%)" cytosol (16.5%) "triose-phosphate isomerase activity (16.5%) isomerase activity (0.7%)" "IPR000652 (20.3%) IPR013785 (20.3%) IPR020861 (20.3%)" "Triosephosphate isomerase (20.3%) Aldolase-type TIM barrel (20.3%) Triosephosphate isomerase, active site (20.3%)" AVDGEYTQSVANQEEIKELFPNTYGMPIVTFEK LSASYVGEDNER root 6.1.1.3 (100%) threonine--tRNA ligase (100%) "GO:0006435 (16.6%) GO:0006417 (0%) GO:0006418 (0%)" "GO:0005829 (16.6%) GO:0005737 (0%) GO:0005840 (0%)" "GO:0004829 (16.6%) GO:0005524 (16.6%) GO:0000049 (16.4%)" "threonyl-tRNA aminoacylation (16.6%) regulation of translation (0%) tRNA aminoacylation for protein translation (0%)" "cytosol (16.6%) cytoplasm (0%) ribosome (0%)" "threonine-tRNA ligase activity (16.6%) ATP binding (16.6%) tRNA binding (16.4%)" "IPR002314 (7.8%) IPR002320 (7.8%) IPR045864 (7.8%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.8%) Threonine-tRNA ligase, class IIa (7.8%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (7.8%)" MREEDPTWVIEQSKELK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.1%) "GO:0003746 (25.1%) GO:0005525 (25.1%) GO:0003924 (24.8%)" ribosome disassembly (25.1%) "translation elongation factor activity (25.1%) GTP binding (25.1%) GTPase activity (24.8%)" "IPR005517 (7.5%) IPR009000 (7.5%) IPR014721 (7.5%)" "Translation elongation factor EFG/EF2, domain IV (7.5%) Translation protein, beta-barrel domain superfamily (7.5%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (7.5%)" VEYMLQSQINPQLAGHGGR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0016226 (24.9%) GO:0051604 (24.1%) GO:0006979 (0.2%)" GO:0005829 (0.2%) "GO:0005506 (24.9%) GO:0051539 (24.5%) GO:0051536 (0.4%)" "iron-sulfur cluster assembly (24.9%) protein maturation (24.1%) response to oxidative stress (0.2%)" cytosol (0.2%) "iron ion binding (24.9%) 4 iron, 4 sulfur cluster binding (24.5%) iron-sulfur cluster binding (0.4%)" "IPR001075 (20.3%) IPR034904 (20.3%) IPR035903 (20%)" "NIF system FeS cluster assembly, NifU, C-terminal (20.3%) Fe-S cluster assembly domain superfamily (20.3%) HesB-like domain superfamily (20%)" VTHFTVTK root GO:0006412 (23.8%) "GO:0022625 (23.8%) GO:0016020 (4.8%)" "GO:0003735 (23.8%) GO:0008097 (23.8%)" translation (23.8%) "cytosolic large ribosomal subunit (23.8%) membrane (4.8%)" "structural constituent of ribosome (23.8%) 5S rRNA binding (23.8%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" EVVEPQKHIVDLAFEAMTSVGVEPIVKPIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.11.4 (100%) tripeptide aminopeptidase (100%) "GO:0006508 (16.7%) GO:0043171 (16.7%)" GO:0005829 (16.7%) "GO:0008237 (16.7%) GO:0008270 (16.7%) GO:0045148 (16.7%)" "proteolysis (16.7%) peptide catabolic process (16.7%)" cytosol (16.7%) "metallopeptidase activity (16.7%) zinc ion binding (16.7%) tripeptide aminopeptidase activity (16.7%)" "IPR001261 (20%) IPR002933 (20%) IPR010161 (20%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%) Peptidase M20 (20%) Peptidase M20B, tripeptide aminopeptidase (20%)" MDVSGLSYAQLVQEGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0044718 (2.4%) GO:0009279 (92.9%) "GO:0004180 (2.4%) GO:0015344 (2.4%)" siderophore transmembrane transport (2.4%) cell outer membrane (92.9%) "carboxypeptidase activity (2.4%) siderophore uptake transmembrane transporter activity (2.4%)" "IPR039426 (14.9%) IPR012910 (14.6%) IPR023996 (14.6%)" "TonB-dependent receptor-like (14.9%) TonB-dependent receptor, plug domain (14.6%) TonB-dependent outer membrane protein, SusC/RagA (14.6%)" AEMGLHDEDISKEEILAQGLATPEEYAILEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" GSFVEIDKFVTHTCHEFGLEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (24%) GO:0009317 (24%) "GO:0003989 (24%) GO:0004658 (24%) GO:0016740 (4%)" carbon fixation (24%) acetyl-CoA carboxylase complex (24%) "acetyl-CoA carboxylase activity (24%) propionyl-CoA carboxylase activity (24%) transferase activity (4%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" AEGICHPILLGNDERIEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (17.4%) "GO:0016746 (17.4%) GO:0046872 (17.4%) GO:0051287 (17.4%)" malate metabolic process (17.4%) "acyltransferase activity (17.4%) metal ion binding (17.4%) NAD binding (17.4%)" "IPR002505 (9.1%) IPR012188 (9.1%) IPR012301 (9.1%)" "Phosphate acetyl/butaryl transferase (9.1%) NAD(P)-dependent malic enzyme (9.1%) Malic enzyme, N-terminal domain (9.1%)" VKVTPSHGGQGYVCPIDLPAYQAAEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.4.13.- (66.7%) 3.5.1.- (33.3%)" "Dipeptidases (66.7%) In linear amides (33.3%)" "GO:0046872 (50%) GO:0016787 (40.9%) GO:0016805 (9.1%)" "metal ion binding (50%) hydrolase activity (40.9%) dipeptidase activity (9.1%)" "IPR002933 (33.3%) IPR011650 (33.3%) IPR051458 (33.3%)" "Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%) Cytosolic and Metallo Dipeptidase (33.3%)" EAEAFDYADVDHLGSYRK Jilunia laotingensis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Jilunia Jilunia laotingensis 5.4.2.10 (100%) phosphoglucosamine mutase (100%) "GO:0005975 (14.3%) GO:0006048 (14.3%) GO:0009252 (14.3%)" GO:0005829 (14.3%) "GO:0000287 (14.3%) GO:0004615 (14.3%) GO:0008966 (14.3%)" "carbohydrate metabolic process (14.3%) UDP-N-acetylglucosamine biosynthetic process (14.3%) peptidoglycan biosynthetic process (14.3%)" cytosol (14.3%) "magnesium ion binding (14.3%) phosphomannomutase activity (14.3%) phosphoglucosamine mutase activity (14.3%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" GSGTTIQEVNR Bacteria Bacteria 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20.1%) "GO:0048500 (19.9%) GO:0005786 (0.2%)" "GO:0008312 (20.1%) GO:0003924 (19.9%) GO:0005525 (19.9%)" SRP-dependent cotranslational protein targeting to membrane (20.1%) "signal recognition particle (19.9%) signal recognition particle, endoplasmic reticulum targeting (0.2%)" "7S RNA binding (20.1%) GTPase activity (19.9%) GTP binding (19.9%)" "IPR004125 (11.3%) IPR036891 (11.3%) IPR022941 (11.2%)" "Signal recognition particle, SRP54 subunit, M-domain (11.3%) Signal recognition particle, SRP54 subunit, M-domain superfamily (11.3%) Signal recognition particle, SRP54 subunit (11.2%)" RVKDPSSNQNVNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015159 (100%) polysaccharide transmembrane transporter activity (100%) "IPR003715 (33.3%) IPR019554 (33.3%) IPR049712 (33.3%)" "Polysaccharide export protein, N-terminal domain (33.3%) Soluble ligand binding domain (33.3%) Polysaccharide export protein (33.3%)" HIQGGGGGQPHFATAGGK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.4%) GO:0005737 (14.1%) "GO:0000049 (14.4%) GO:0002161 (14.4%) GO:0004813 (14.4%)" alanyl-tRNA aminoacylation (14.4%) cytoplasm (14.1%) "tRNA binding (14.4%) aminoacyl-tRNA deacylase activity (14.4%) alanine-tRNA ligase activity (14.4%)" "IPR003156 (9.2%) IPR012947 (9.2%) IPR018163 (9.2%)" "DHHA1 domain (9.2%) Threonyl/alanyl tRNA synthetase, SAD (9.2%) Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily (9.2%)" CYNIEVVADQKVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (40%) "GO:0004493 (40%) GO:0051213 (13.3%) GO:0016829 (6.7%)" L-methylmalonyl-CoA metabolic process (40%) "methylmalonyl-CoA epimerase activity (40%) dioxygenase activity (13.3%) lyase activity (6.7%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" NEVIADIVALLQSPAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (1.3%) "GO:0005840 (49.4%) GO:1990904 (47.5%) GO:0022625 (0.6%)" "GO:0003735 (0.6%) GO:0070180 (0.6%)" translation (1.3%) "ribosome (49.4%) ribonucleoprotein complex (47.5%) cytosolic large ribosomal subunit (0.6%)" "structural constituent of ribosome (0.6%) large ribosomal subunit rRNA binding (0.6%)" "IPR043141 (33.8%) IPR001790 (32.9%) IPR047865 (32.9%)" "Large ribosomal subunit protein uL10-like domain superfamily (33.8%) Large ribosomal subunit protein uL10 (32.9%) Large ribosomal subunit protein uL10, bacteria/organella (32.9%)" EVINEAELIKLMEER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.95 (62.5%) 1.1.1.290 (25%) 1.1.1.81 (12.5%)" "phosphoglycerate dehydrogenase (62.5%) 4-phosphoerythronate dehydrogenase (25%) hydroxypyruvate reductase (12.5%)" "GO:0051287 (50%) GO:0016616 (39.7%) GO:0004617 (7.4%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (39.7%) phosphoglycerate dehydrogenase activity (7.4%)" "IPR006139 (33.3%) IPR006140 (33.3%) IPR036291 (33.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" ALVLDNKNPLSFYLTAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.-.- (100%) Acting on peptide bonds (peptidases) (100%) GO:0006508 (50%) GO:0008233 (50%) proteolysis (50%) peptidase activity (50%) "IPR011990 (29.9%) IPR019734 (29.9%) IPR056833 (20.9%)" "Tetratricopeptide-like helical domain superfamily (29.9%) Tetratricopeptide repeat (29.9%) Tetratricopeptide repeat protein 21A/21B, N-terminal ARM repeat (20.9%)" IKLVIPPELAYGK root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (36.1%) GO:0042026 (0.1%)" "GO:0030313 (15.8%) GO:0042597 (10.6%) GO:0030288 (0.1%)" "GO:0003755 (36.3%) GO:0016853 (0.7%) GO:0044183 (0.1%)" "protein folding (36.1%) protein refolding (0.1%)" "cell envelope (15.8%) periplasmic space (10.6%) outer membrane-bounded periplasmic space (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (36.3%) isomerase activity (0.7%) protein folding chaperone (0.1%)" "IPR001179 (25.2%) IPR046357 (25.2%) IPR000774 (24.9%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (25.2%) Peptidyl-prolyl cis-trans isomerase domain superfamily (25.2%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (24.9%)" AIHAGLECGLFLDKYPALDMISFGPTLTGVHSPDER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (26%) IPR002933 (26%) IPR011650 (26%)" "Peptidase M20C, Xaa-His dipeptidase (26%) Peptidase M20 (26%) Peptidase M20, dimerisation domain (26%)" EKIFEALESALATATK Bacteria Bacteria "GO:0006353 (16.5%) GO:0031564 (16.5%) GO:0031554 (0.1%)" "GO:0005829 (16.5%) GO:0008023 (0%)" "GO:0003700 (16.6%) GO:0003723 (16.5%) GO:0000166 (15.8%)" "DNA-templated transcription termination (16.5%) transcription antitermination (16.5%) regulation of termination of DNA-templated transcription (0.1%)" "cytosol (16.5%) transcription elongation factor complex (0%)" "DNA-binding transcription factor activity (16.6%) RNA binding (16.5%) nucleotide binding (15.8%)" "IPR013735 (9%) IPR036555 (9%) IPR030842 (8.9%)" "Transcription factor NusA, N-terminal (9%) NusA, N-terminal domain superfamily (9%) Transcription factor NusA, prokaryotes (8.9%)" APAKESAPAAAAPAAQPALAAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.3.1.61 (98.2%) 2.3.1.- (1.8%)" "dihydrolipoyllysine-residue succinyltransferase (98.2%) Transferring groups other than amino-acyl groups (1.8%)" "GO:0006099 (19.3%) GO:0033512 (18.6%) GO:0006554 (0.4%)" "GO:0005829 (19.3%) GO:0045252 (19%) GO:0005737 (1.1%)" "GO:0004149 (20.1%) GO:0031405 (1.1%) GO:0016407 (0.7%)" "tricarboxylic acid cycle (19.3%) L-lysine catabolic process to acetyl-CoA via saccharopine (18.6%) lysine catabolic process (0.4%)" "cytosol (19.3%) oxoglutarate dehydrogenase complex (19%) cytoplasm (1.1%)" "dihydrolipoyllysine-residue succinyltransferase activity (20.1%) lipoic acid binding (1.1%) acetyltransferase activity (0.7%)" "IPR004167 (11.4%) IPR036625 (11.4%) IPR000089 (11.2%)" "Peripheral subunit-binding domain (11.4%) E3-binding domain superfamily (11.4%) Biotin/lipoyl attachment (11.2%)" TLGTAACPPYHIAIVIGGTSAEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" AAALQPGEALLLENLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (32.3%) IPR015824 (32.3%) IPR036043 (32.3%)" "Phosphoglycerate kinase (32.3%) Phosphoglycerate kinase, N-terminal (32.3%) Phosphoglycerate kinase superfamily (32.3%)" TVVVEGCEEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0005829 (100%) cytosol (100%) IPR017704 (100%) Putative selenium-binding protein YdfZ (100%) MDNFVQVAQQDVQKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" VIVPTDEEVERNPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.1.1.199 (100%) 16S rRNA (cytosine(1402)-N(4))-methyltransferase (100%) GO:0070475 (33.3%) GO:0005737 (33.3%) GO:0071424 (33.3%) rRNA base methylation (33.3%) cytoplasm (33.3%) rRNA (cytosine-N4-)-methyltransferase activity (33.3%) "IPR002903 (33.3%) IPR023397 (33.3%) IPR029063 (33.3%)" "Ribosomal RNA small subunit methyltransferase H (33.3%) S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily (33.3%) S-adenosyl-L-methionine-dependent methyltransferase superfamily (33.3%)" TAYGDEEFRAEQHTHILEAQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.49 (100%) glucose-6-phosphate dehydrogenase (NADP(+)) (100%) "GO:0006006 (20%) GO:0009051 (20%)" GO:0005829 (20%) "GO:0004345 (20%) GO:0050661 (20%)" "glucose metabolic process (20%) pentose-phosphate shunt, oxidative branch (20%)" cytosol (20%) "glucose-6-phosphate dehydrogenase activity (20%) NADP binding (20%)" "IPR001282 (20%) IPR019796 (20%) IPR022674 (20%)" "Glucose-6-phosphate dehydrogenase (20%) Glucose-6-phosphate dehydrogenase, active site (20%) Glucose-6-phosphate dehydrogenase, NAD-binding (20%)" FKEYPAGEPVTMNEMELAAVYLQPIDMEPR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria GO:0046872 (100%) metal ion binding (100%) "IPR018470 (50%) IPR038482 (50%)" "Periplasmic metal-binding protein Tp34-type (50%) Periplasmic metal-binding protein Tp34-type superfamily (50%)" GADKQVIGQVAADLR root "GO:0002181 (24.7%) GO:0006412 (0.1%) GO:0042254 (0.1%)" "GO:0022625 (24.7%) GO:0005840 (0.6%) GO:0015935 (0.1%)" "GO:0003735 (24.8%) GO:0019843 (24.7%) GO:0070180 (0%)" "cytoplasmic translation (24.7%) translation (0.1%) ribosome biogenesis (0.1%)" "cytosolic large ribosomal subunit (24.7%) ribosome (0.6%) small ribosomal subunit (0.1%)" "structural constituent of ribosome (24.8%) rRNA binding (24.7%) large ribosomal subunit rRNA binding (0%)" "IPR020040 (19.9%) IPR036789 (19.9%) IPR000702 (19.9%)" "Large ribosomal subunit protein uL6, alpha-beta domain (19.9%) Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily (19.9%) Large ribosomal subunit protein uL6-like (19.9%)" TQLQDAVPMTLGQEFR root 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006531 (22.8%) GO:0006099 (22.1%) GO:0006533 (0%)" "GO:0005829 (22.7%) GO:0016020 (0%)" "GO:0008797 (22.8%) GO:0042802 (9.3%) GO:0016829 (0.2%)" "aspartate metabolic process (22.8%) tricarboxylic acid cycle (22.1%) L-aspartate catabolic process (0%)" "cytosol (22.7%) membrane (0%)" "aspartate ammonia-lyase activity (22.8%) identical protein binding (9.3%) lyase activity (0.2%)" "IPR022761 (12.9%) IPR051546 (12.9%) IPR008948 (12.9%)" "Fumarate lyase, N-terminal (12.9%) Class-II Aspartate Ammonia-Lyase (12.9%) L-Aspartase-like (12.9%)" TTDTQYGEILEGVYDAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis ILQLMNLAPSHIVLPAIHIKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (33.3%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (33.3%)" "IPR003741 (12.7%) IPR004452 (12.7%) IPR009051 (12.7%)" "LUD domain (12.7%) L-lactate oxidation iron-sulfur protein LutB/LldF (12.7%) Alpha-helical ferredoxin (12.7%)" VRELDTYCEIVPYNKFPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0006177 (0.5%) GO:0005829 (33.2%) "GO:0003921 (33.2%) GO:0005524 (33.2%)" GMP biosynthetic process (0.5%) cytosol (33.2%) "GMP synthase activity (33.2%) ATP binding (33.2%)" "IPR001674 (12.5%) IPR004739 (12.5%) IPR014729 (12.5%)" "GMP synthase, C-terminal (12.5%) GMP synthase, glutamine amidotransferase (12.5%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" LKAEEQAADQVAYQQAVQAIKDKQFVLEADQVIFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR025347 (100%) Protein of unknown function DUF4251 (100%) EFEAIPCSAEMEPLKAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.3.8.1 (100%) short-chain acyl-CoA dehydrogenase (100%) "GO:0050660 (50%) GO:0003995 (45.5%) GO:0016937 (4.5%)" "flavin adenine dinucleotide binding (50%) acyl-CoA dehydrogenase activity (45.5%) short-chain fatty acyl-CoA dehydrogenase activity (4.5%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009075 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.1%)" MGVVLCYAPNGSDLDALRDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.3.1.21 (91.3%) 2.1.2.- (8.7%)" "phosphoribosylglycinamide formyltransferase 2 (91.3%) Hydroxymethyl-, formyl- and related transferases (8.7%)" GO:0006189 (16.4%) GO:0005829 (16.4%) "GO:0000287 (16.4%) GO:0004644 (16.4%) GO:0005524 (16.4%)" 'de novo' IMP biosynthetic process (16.4%) cytosol (16.4%) "magnesium ion binding (16.4%) phosphoribosylglycinamide formyltransferase activity (16.4%) ATP binding (16.4%)" "IPR003135 (12.5%) IPR005862 (12.5%) IPR011054 (12.5%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.5%) Formate-dependent phosphoribosylglycinamide formyltransferase (12.5%) Rudiment single hybrid motif (12.5%)" YKINLIDTPGHVDFTVEVER root "GO:0032790 (19.9%) GO:0006412 (0.3%) GO:0032543 (0.3%)" "GO:0005737 (17.9%) GO:0005759 (0.4%) GO:0005739 (0.3%)" "GO:0003924 (20.2%) GO:0005525 (20.2%) GO:0003746 (19.9%)" "ribosome disassembly (19.9%) translation (0.3%) mitochondrial translation (0.3%)" "cytoplasm (17.9%) mitochondrial matrix (0.4%) mitochondrion (0.3%)" "GTPase activity (20.2%) GTP binding (20.2%) translation elongation factor activity (19.9%)" "IPR000795 (6.5%) IPR005225 (6.5%) IPR027417 (6.5%)" "Translational (tr)-type GTP-binding domain (6.5%) Small GTP-binding domain (6.5%) P-loop containing nucleoside triphosphate hydrolase (6.5%)" QLKDVLGANPCPIQIPIGAEETFKGVVDLIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" SGTGQPITSYTSHYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (33.3%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (33.3%)" "IPR003741 (12.9%) IPR004452 (12.9%) IPR009051 (12.9%)" "LUD domain (12.9%) L-lactate oxidation iron-sulfur protein LutB/LldF (12.9%) Alpha-helical ferredoxin (12.9%)" SYLQSDQNVKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (0.5%) "GO:0005524 (24.6%) GO:0016887 (24.6%) GO:0051082 (24.6%)" cytoplasm (0.5%) "ATP binding (24.6%) ATP hydrolysis activity (24.6%) unfolded protein binding (24.6%)" "IPR001404 (15.8%) IPR020568 (15.8%) IPR020575 (15.8%)" "Heat shock protein Hsp90 family (15.8%) Ribosomal protein uS5 domain 2-type superfamily (15.8%) Heat shock protein Hsp90, N-terminal (15.8%)" SIHNLENSYFR Pseudomonadati Bacteria Pseudomonadati 2.4.2.14 (100%) amidophosphoribosyltransferase (100%) "GO:0009113 (20.4%) GO:0006189 (15.3%) GO:0006164 (5.1%)" "GO:0004044 (20.4%) GO:0046872 (19.1%) GO:0051536 (19.1%)" "purine nucleobase biosynthetic process (20.4%) 'de novo' IMP biosynthetic process (15.3%) purine nucleotide biosynthetic process (5.1%)" "amidophosphoribosyltransferase activity (20.4%) metal ion binding (19.1%) iron-sulfur cluster binding (19.1%)" "IPR017932 (20.5%) IPR029055 (20.5%) IPR005854 (19.9%)" "Glutamine amidotransferase type 2 domain (20.5%) Nucleophile aminohydrolases, N-terminal (20.5%) Amidophosphoribosyltransferase (19.9%)" GFVADKEYLNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0033178 (50%) GO:0046961 (50%) proton-transporting two-sector ATPase complex, catalytic domain (50%) proton-transporting ATPase activity, rotational mechanism (50%) IPR002842 (100%) V-type ATPase subunit E (100%) KTSTQVLVQAADLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR027848 (100%) Protein of unknown function DUF4494 (100%) RIVNEPTAAALAYGLDKAHKDMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0042026 (0.3%) GO:0051085 (0.3%)" GO:0005737 (1.3%) "GO:0005524 (32.5%) GO:0051082 (32.5%) GO:0140662 (32.5%)" "protein refolding (0.3%) obsolete chaperone cofactor-dependent protein refolding (0.3%)" cytoplasm (1.3%) "ATP binding (32.5%) unfolded protein binding (32.5%) ATP-dependent protein folding chaperone (32.5%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" ACELTEEFAKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006099 (16.7%) IPR006158 (16.7%) IPR006159 (16.7%)" "Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-binding domain (16.7%) Methylmalonyl-CoA mutase, C-terminal (16.7%)" TNADTPHDAEVAR root "2.7.9.1 (99.6%) 2.7.-.- (0.4%)" "pyruvate, phosphate dikinase (99.6%) Transferring phosphorus-containing groups (0.4%)" "GO:0050242 (25.4%) GO:0016301 (25.3%) GO:0046872 (24.9%)" "pyruvate, phosphate dikinase activity (25.4%) kinase activity (25.3%) metal ion binding (24.9%)" "IPR000121 (10.1%) IPR010121 (10.1%) IPR015813 (10.1%)" "PEP-utilising enzyme, C-terminal (10.1%) Pyruvate, phosphate dikinase (10.1%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (10.1%)" MIYSHEVQHMCVVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales LIPAGTGYAYHQDR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (14.4%) GO:0006352 (0%) GO:0006412 (0%)" "GO:0000428 (14.8%) GO:0005829 (13.3%) GO:0000345 (0%)" "GO:0003899 (14.5%) GO:0003677 (14.4%) GO:0000287 (13.8%)" "DNA-templated transcription (14.4%) DNA-templated transcription initiation (0%) translation (0%)" "DNA-directed RNA polymerase complex (14.8%) cytosol (13.3%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA-directed RNA polymerase activity (14.5%) DNA binding (14.4%) magnesium ion binding (13.8%)" "IPR007081 (9.3%) IPR045867 (9.2%) IPR007083 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.3%) DNA-directed RNA polymerase, subunit beta-prime (9.2%) RNA polymerase Rpb1, domain 4 (9.1%)" VILIGNVGKDPDVR Pseudomonadati Bacteria Pseudomonadati "GO:0006260 (31%) GO:0006281 (3.5%) GO:0006310 (3.5%)" GO:0009295 (31%) GO:0003697 (31%) "DNA replication (31%) DNA repair (3.5%) DNA recombination (3.5%)" nucleoid (31%) single-stranded DNA binding (31%) "IPR000424 (33.3%) IPR011344 (33.3%) IPR012340 (33.3%)" "Primosome PriB/single-strand DNA-binding (33.3%) Single-stranded DNA-binding protein (33.3%) Nucleic acid-binding, OB-fold (33.3%)" KVEVVDPGDTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.1%) GO:0000428 (17.1%) "GO:0003677 (17.1%) GO:0003899 (17.1%) GO:0000287 (15.4%)" DNA-templated transcription (17.1%) DNA-directed RNA polymerase complex (17.1%) "DNA binding (17.1%) DNA-directed RNA polymerase activity (17.1%) magnesium ion binding (15.4%)" "IPR007081 (9.6%) IPR045867 (9.6%) IPR000722 (9%)" "RNA polymerase Rpb1, domain 5 (9.6%) DNA-directed RNA polymerase, subunit beta-prime (9.6%) RNA polymerase, alpha subunit (9%)" ESYLMYHEELESLTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.5.1.7 (60%) 1.5.1.43 (40%)" "saccharopine dehydrogenase (NAD(+), L-lysine-forming) (60%) carboxynorspermidine synthase (40%)" "GO:0004754 (50%) GO:0102143 (50%)" "saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (50%) carboxynorspermidine dehydrogenase activity (50%)" "IPR005097 (33.3%) IPR032095 (33.3%) IPR036291 (33.3%)" "Saccharopine dehydrogenase, NADP binding domain (33.3%) Saccharopine dehydrogenase-like, C-terminal (33.3%) NAD(P)-binding domain superfamily (33.3%)" VDFSNEALQAAEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.1.1.16 (100%) cysteine--tRNA ligase (100%) GO:0006423 (20%) GO:0005829 (20%) "GO:0004817 (20%) GO:0005524 (20%) GO:0008270 (19.6%)" cysteinyl-tRNA aminoacylation (20%) cytosol (20%) "cysteine-tRNA ligase activity (20%) ATP binding (20%) zinc ion binding (19.6%)" "IPR009080 (14.3%) IPR014729 (14.3%) IPR015273 (14.3%)" "Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (14.3%) Rossmann-like alpha/beta/alpha sandwich fold (14.3%) Cysteinyl-tRNA synthetase, class Ia, DALR (14.3%)" HSGMIQASELKGVIEQYT Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" RLIAELNDFLAANAVEFANIKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" TLLQIAEQSENHQFPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) GO:0005975 (50%) GO:0004563 (50%) carbohydrate metabolic process (50%) beta-N-acetylhexosaminidase activity (50%) "IPR015882 (16.7%) IPR015883 (16.7%) IPR017853 (16.7%)" "Beta-hexosaminidase, bacterial type, N-terminal (16.7%) Glycoside hydrolase family 20, catalytic domain (16.7%) Glycoside hydrolase superfamily (16.7%)" VNINGGAPQR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0017038 (32.6%) GO:0051301 (32.4%) GO:0015031 (0.2%)" "GO:0042597 (32.8%) GO:0016020 (0.2%) GO:0030288 (0.2%)" "GO:0016787 (0.2%) GO:0019904 (0.2%) GO:0044877 (0.2%)" "protein import (32.6%) cell division (32.4%) protein transport (0.2%)" "periplasmic space (32.8%) membrane (0.2%) outer membrane-bounded periplasmic space (0.2%)" "hydrolase activity (0.2%) protein domain specific binding (0.2%) protein-containing complex binding (0.2%)" "IPR011042 (25.3%) IPR011659 (25.3%) IPR014167 (24.8%)" "Six-bladed beta-propeller, TolB-like (25.3%) WD40-like beta-propeller (25.3%) Tol-Pal system protein TolB (24.8%)" VGYINDQYVLNPTQDELKESK root 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.3%) GO:0006396 (14.1%) GO:0006401 (0%)" "GO:0005829 (14.3%) GO:0016020 (0%) GO:1990061 (0%)" "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "mRNA catabolic process (14.3%) RNA processing (14.1%) RNA catabolic process (0%)" "cytosol (14.3%) membrane (0%) bacterial degradosome (0%)" "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR012162 (7.9%) IPR015847 (7.9%) IPR027408 (7.8%)" "Polyribonucleotide nucleotidyltransferase (7.9%) Exoribonuclease, phosphorolytic domain 2 (7.9%) PNPase/RNase PH domain superfamily (7.8%)" NSDVVVITSGIPR Bacteria Bacteria "1.1.1.37 (98.6%) 1.1.1.27 (1.4%)" "malate dehydrogenase (98.6%) L-lactate dehydrogenase (1.4%)" "GO:0006089 (25.2%) GO:0006099 (24.7%) GO:0019752 (0.1%)" GO:0005737 (0.1%) "GO:0004459 (25.2%) GO:0030060 (24.6%) GO:0016491 (0.2%)" "lactate metabolic process (25.2%) tricarboxylic acid cycle (24.7%) carboxylic acid metabolic process (0.1%)" cytoplasm (0.1%) "L-lactate dehydrogenase (NAD+) activity (25.2%) L-malate dehydrogenase (NAD+) activity (24.6%) oxidoreductase activity (0.2%)" "IPR001236 (16.8%) IPR011275 (16.7%) IPR022383 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.8%) Malate dehydrogenase, type 3 (16.7%) Lactate/malate dehydrogenase, C-terminal (16.7%)" HVGPDMDVPAGDIGVGGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (25.3%) GO:0005829 (25.3%) "GO:0004354 (25.3%) GO:0000166 (24.2%)" glutamate biosynthetic process (25.3%) cytosol (25.3%) "glutamate dehydrogenase (NADP+) activity (25.3%) nucleotide binding (24.2%)" "IPR006095 (11.3%) IPR006097 (11.3%) IPR033524 (11.3%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.3%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.3%) Leu/Phe/Val dehydrogenases active site (11.3%)" IISSTLPQQDTGEMAR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "IPR019720 (50%) IPR038307 (50%)" "Plasmid stability protein, StbB (50%) StbB superfamily (50%)" QLVGGAGEDTILAR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0005886 (53.4%) GO:0045121 (46.6%)" "plasma membrane (53.4%) membrane raft (46.6%)" IPR022853 (100%) Flotillin-like protein FloA (100%) TGRNPQTGKEITIAAAK root 3.4.21.- (100%) Serine endopeptidases (100%) "GO:0030261 (11.2%) GO:0006270 (11%) GO:0006351 (11%)" "GO:0005829 (11.2%) GO:1990103 (11%) GO:1990178 (11%)" "GO:0003677 (11.3%) GO:0030527 (11.2%) GO:0042802 (11%)" "chromosome condensation (11.2%) DNA replication initiation (11%) DNA-templated transcription (11%)" "cytosol (11.2%) DnaA-HU complex (11%) HU-DNA complex (11%)" "DNA binding (11.3%) structural constituent of chromatin (11.2%) identical protein binding (11%)" "IPR000119 (33.2%) IPR010992 (33%) IPR020816 (32.9%)" "Histone-like DNA-binding protein (33.2%) Integration host factor (IHF)-like DNA-binding domain superfamily (33%) Histone-like DNA-binding protein, conserved site (32.9%)" TLHILPHWTWPGR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.2.1.23 (100%) beta-galactosidase (100%) "GO:0005975 (49.5%) GO:0006508 (0.2%)" "GO:0004553 (43.5%) GO:0004565 (6.3%) GO:0008234 (0.2%)" "carbohydrate metabolic process (49.5%) proteolysis (0.2%)" "hydrolase activity, hydrolyzing O-glycosyl compounds (43.5%) beta-galactosidase activity (6.3%) cysteine-type peptidase activity (0.2%)" "IPR051913 (7.8%) IPR013783 (7.8%) IPR032311 (7.8%)" "Glycosyl Hydrolase 2 Domain-Containing Protein (7.8%) Immunoglobulin-like fold (7.8%) Domain of unknown function DUF4982 (7.8%)" ICNEIGYPVMLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.3.4.14 (98.5%) 6.4.1.2 (1.5%)" "biotin carboxylase (98.5%) acetyl-CoA carboxylase (1.5%)" GO:2001295 (16.2%) "GO:0005524 (22.8%) GO:0046872 (22.8%) GO:0003989 (15%)" malonyl-CoA biosynthetic process (16.2%) "ATP binding (22.8%) metal ion binding (22.8%) acetyl-CoA carboxylase activity (15%)" "IPR005479 (12.5%) IPR005481 (12.5%) IPR011761 (12.5%)" "Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%) ATP-grasp fold (12.5%)" VASICYQGLMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0017038 (50%) GO:0005886 (50%) protein import (50%) plasma membrane (50%) "IPR002898 (50%) IPR050790 (50%)" "MotA/TolQ/ExbB proton channel (50%) ExbB/TolQ Biopolymer Transport (50%)" NNEFKKDGIDYHAAADLTGQANR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (48.7%) "GO:0004332 (48.7%) GO:0016829 (2.6%)" glycolytic process (48.7%) "fructose-bisphosphate aldolase activity (48.7%) lyase activity (2.6%)" "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" GDKFEFTIPFAEAYGEYDEEHVIDLPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0042026 (32.7%) GO:0005737 (32.7%) "GO:0003755 (32.7%) GO:0016853 (2%)" protein refolding (32.7%) cytoplasm (32.7%) "peptidyl-prolyl cis-trans isomerase activity (32.7%) isomerase activity (2%)" "IPR001179 (33.3%) IPR046357 (33.3%) IPR048261 (33.3%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) PPIase chaperone SlpA/SlyD-like, insertion domain superfamily (33.3%)" AGAEGGQIIENPILSNFK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) GO:0000428 (17%) "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0000287 (15.5%)" DNA-templated transcription (16.8%) DNA-directed RNA polymerase complex (17%) "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) magnesium ion binding (15.5%)" "IPR007081 (9.1%) IPR007083 (9.1%) IPR038120 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.1%) RNA polymerase Rpb1, domain 4 (9.1%) RNA polymerase Rpb1, funnel domain superfamily (9.1%)" LIQGGGGGQPHFATAGGK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.7 (100%) alanine--tRNA ligase (100%) "GO:0006419 (14.2%) GO:0006412 (0.2%)" GO:0005737 (14%) "GO:0000049 (14.4%) GO:0005524 (14.4%) GO:0002161 (14.2%)" "alanyl-tRNA aminoacylation (14.2%) translation (0.2%)" cytoplasm (14%) "tRNA binding (14.4%) ATP binding (14.4%) aminoacyl-tRNA deacylase activity (14.2%)" "IPR003156 (9.2%) IPR012947 (9.2%) IPR050058 (9.2%)" "DHHA1 domain (9.2%) Threonyl/alanyl tRNA synthetase, SAD (9.2%) Alanine--tRNA ligase (9.2%)" VIGQNEAVDAVSNAIR root "GO:0034605 (17.3%) GO:0042026 (14.8%) GO:0006508 (1.1%)" "GO:0005829 (13.7%) GO:0005737 (3.6%) GO:0016020 (0.1%)" "GO:0005524 (17.3%) GO:0016887 (17.3%) GO:0042802 (13.7%)" "cellular response to heat (17.3%) protein refolding (14.8%) proteolysis (1.1%)" "cytosol (13.7%) cytoplasm (3.6%) membrane (0.1%)" "ATP binding (17.3%) ATP hydrolysis activity (17.3%) identical protein binding (13.7%)" "IPR027417 (9%) IPR050130 (9%) IPR003959 (8.8%)" "P-loop containing nucleoside triphosphate hydrolase (9%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (9%) ATPase, AAA-type, core (8.8%)" TVKVGELSYEGLELLNAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" TLNYTHLEEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0008199 (43.3%) GO:0016722 (43.3%) GO:0003677 (13.3%)" "ferric iron binding (43.3%) oxidoreductase activity, acting on metal ions (43.3%) DNA binding (13.3%)" "IPR002177 (20%) IPR008331 (20%) IPR009078 (20%)" "DNA-binding protein Dps (20%) Ferritin/DPS domain (20%) Ferritin-like superfamily (20%)" HTYLVSLLGIK Pseudomonadati Bacteria Pseudomonadati 2.7.7.4 (100%) sulfate adenylyltransferase (100%) "GO:0000103 (16.1%) GO:0070814 (16.1%) GO:0006790 (0.6%)" "GO:0003924 (17%) GO:0005525 (17%) GO:0004781 (16.4%)" "sulfate assimilation (16.1%) hydrogen sulfide biosynthetic process (16.1%) sulfur compound metabolic process (0.6%)" "GTPase activity (17%) GTP binding (17%) sulfate adenylyltransferase (ATP) activity (16.4%)" "IPR000795 (9.2%) IPR027417 (9.2%) IPR050100 (9.2%)" "Translational (tr)-type GTP-binding domain (9.2%) P-loop containing nucleoside triphosphate hydrolase (9.2%) Translation factor GTPase superfamily members (9.2%)" VHVSTYQAASGAGATAMAELVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000534 (20%) IPR005986 (20%) IPR012080 (20%)" "Semialdehyde dehydrogenase, NAD-binding (20%) Aspartate-semialdehyde dehydrogenase, beta-type (20%) Aspartate-semialdehyde dehydrogenase (20%)" MLQPSPVEKIPDGPTTPEIAYQMVKDETFAQTQPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.15 (100%) glutamate decarboxylase (100%) GO:0006538 (24.8%) GO:0005829 (24.8%) "GO:0004351 (24.8%) GO:0030170 (24.8%) GO:0016829 (0.9%)" L-glutamate catabolic process (24.8%) cytosol (24.8%) "glutamate decarboxylase activity (24.8%) pyridoxal phosphate binding (24.8%) lyase activity (0.9%)" "IPR002129 (25%) IPR010107 (25%) IPR015421 (25%)" "Pyridoxal phosphate-dependent decarboxylase (25%) Glutamate decarboxylase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%)" TGIMAGSLCPVELMK Pseudomonadati Bacteria Pseudomonadati "6.2.1.41 (42.2%) 6.2.1.- (35.6%) 6.2.1.3 (15.6%)" "3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate-CoA ligase (42.2%) Acid--thiol ligases (35.6%) long-chain-fatty-acid--CoA ligase (15.6%)" GO:0006631 (47.9%) "GO:0031956 (49.7%) GO:0004467 (1.7%) GO:0004321 (0.2%)" fatty acid metabolic process (47.9%) "medium-chain fatty acid-CoA ligase activity (49.7%) long-chain fatty acid-CoA ligase activity (1.7%) fatty-acyl-CoA synthase activity (0.2%)" "IPR000873 (22.3%) IPR025110 (22%) IPR045851 (22%)" "AMP-dependent synthetase/ligase domain (22.3%) AMP-binding enzyme, C-terminal domain (22%) AMP-binding enzyme, C-terminal domain superfamily (22%)" RVAALEGDVLGSYQHGAR root GO:0006414 (0.5%) "GO:0005737 (46.7%) GO:0005739 (0.5%) GO:0005829 (0.5%)" "GO:0003746 (49.7%) GO:0005085 (0.5%) GO:0008270 (0.5%)" translational elongation (0.5%) "cytoplasm (46.7%) mitochondrion (0.5%) cytosol (0.5%)" "translation elongation factor activity (49.7%) guanyl-nucleotide exchange factor activity (0.5%) zinc ion binding (0.5%)" "IPR001816 (20.1%) IPR014039 (20.1%) IPR018101 (20.1%)" "Translation elongation factor EFTs/EF1B (20.1%) Translation elongation factor EFTs/EF1B, dimerisation (20.1%) Translation elongation factor Ts, conserved site (20.1%)" IHSIGAGCFIAEIQQTSNVTYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005975 (32.4%) "GO:0004476 (33.8%) GO:0008270 (32.4%) GO:0046872 (1.5%)" carbohydrate metabolic process (32.4%) "mannose-6-phosphate isomerase activity (33.8%) zinc ion binding (32.4%) metal ion binding (1.5%)" "IPR011051 (16.9%) IPR014710 (16.9%) IPR049071 (16.9%)" "RmlC-like cupin domain superfamily (16.9%) RmlC-like jelly roll fold (16.9%) Mannose-6-phosphate isomerase, cupin domain (16.9%)" NENLSAPDTEVYDAVNQIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (100%) cell outer membrane (100%) "IPR012944 (33.8%) IPR033985 (33.8%) IPR011990 (32.4%)" "RagB/SusD domain (33.8%) SusD-like, N-terminal (33.8%) Tetratricopeptide-like helical domain superfamily (32.4%)" IVYDECPAATKDIYLYGVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (44%) IPR019734 (44%) IPR013105 (12%)" "Tetratricopeptide-like helical domain superfamily (44%) Tetratricopeptide repeat (44%) Tetratricopeptide repeat 2 (12%)" ESVPDCYADLGFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20.6%) GO:0009263 (17.5%)" "GO:0004748 (20.6%) GO:0031419 (20.6%) GO:0005524 (17.5%)" "DNA biosynthetic process (20.6%) deoxyribonucleotide biosynthetic process (17.5%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.6%) cobalamin binding (20.6%) ATP binding (17.5%)" "IPR000788 (26%) IPR013344 (26%) IPR050862 (26%)" "Ribonucleotide reductase large subunit, C-terminal (26%) Ribonucleotide reductase, adenosylcobalamin-dependent (26%) Ribonucleoside diphosphate reductase class-2 (26%)" IVVLGAGESGAGAAVLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.2.9 (100%) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase (100%) "GO:0008360 (14.2%) GO:0009252 (14.2%) GO:0051301 (14.2%)" GO:0005737 (14.2%) "GO:0005524 (14.2%) GO:0008764 (14.2%) GO:0016874 (0.3%)" "regulation of cell shape (14.2%) peptidoglycan biosynthetic process (14.2%) cell division (14.2%)" cytoplasm (14.2%) "ATP binding (14.2%) UDP-N-acetylmuramoylalanine-D-glutamate ligase activity (14.2%) ligase activity (0.3%)" "IPR004101 (20%) IPR005762 (20%) IPR013221 (20%)" "Mur ligase, C-terminal (20%) UDP-N-acetylmuramoylalanine-D-glutamate ligase MurD (20%) Mur ligase, central (20%)" SFDDQVLSSTVANLLTNLGGIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (46.7%) IPR024302 (46.7%) IPR041662 (6.7%)" "Tetratricopeptide-like helical domain superfamily (46.7%) SusD-like (46.7%) SusD-like 2 (6.7%)" KKALIDDLMGVYDKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (46.2%) IPR019734 (46.2%) IPR013105 (7.7%)" "Tetratricopeptide-like helical domain superfamily (46.2%) Tetratricopeptide repeat (46.2%) Tetratricopeptide repeat 2 (7.7%)" IIGMGGALDSSR root "1.1.1.37 (99.7%) 1.1.1.27 (0.3%)" "malate dehydrogenase (99.7%) L-lactate dehydrogenase (0.3%)" "GO:0006089 (25.5%) GO:0006099 (23.9%) GO:0019752 (0.1%)" "GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0004459 (25.5%) GO:0030060 (24.8%) GO:0016491 (0.1%)" "lactate metabolic process (25.5%) tricarboxylic acid cycle (23.9%) carboxylic acid metabolic process (0.1%)" "cytoplasm (0.1%) membrane (0.1%)" "L-lactate dehydrogenase (NAD+) activity (25.5%) L-malate dehydrogenase (NAD+) activity (24.8%) oxidoreductase activity (0.1%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR022383 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Lactate/malate dehydrogenase, C-terminal (16.7%)" TTMVSVLEESFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006353 (19.6%) GO:0031564 (19.6%)" GO:0005829 (19.6%) "GO:0003700 (19.6%) GO:0003723 (19.6%) GO:0003746 (1.9%)" "DNA-templated transcription termination (19.6%) transcription antitermination (19.6%)" cytosol (19.6%) "DNA-binding transcription factor activity (19.6%) RNA binding (19.6%) translation elongation factor activity (1.9%)" "IPR013735 (12.5%) IPR030842 (12.5%) IPR036555 (12.5%)" "Transcription factor NusA, N-terminal (12.5%) Transcription factor NusA, prokaryotes (12.5%) NusA, N-terminal domain superfamily (12.5%)" LQLIDQLKELCESQDDFNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR007139 (100%) Protein of unknown function DUF349 (100%) MNSGEIEEGKMVLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (25%) GO:0005829 (25%) "GO:0004819 (25%) GO:0005524 (25%)" glutaminyl-tRNA aminoacylation (25%) cytosol (25%) "glutamine-tRNA ligase activity (25%) ATP binding (25%)" "IPR004514 (10.2%) IPR020058 (10.2%) IPR020059 (10.2%)" "Glutamine-tRNA synthetase (10.2%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (10.2%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain (10.2%)" ILDVLIPPAK root "3.4.25.2 (57%) 3.4.21.- (40.5%) 3.6.1.15 (1.3%)" "HslU--HslV peptidase (57%) Serine endopeptidases (40.5%) nucleoside-triphosphate phosphatase (1.3%)" "GO:0051603 (14.4%) GO:0043335 (13.9%) GO:0006508 (0.1%)" "GO:0009376 (14.4%) GO:0005829 (0%) GO:0005839 (0%)" "GO:0005524 (14.4%) GO:0016887 (14.4%) GO:0008233 (14.4%)" "proteolysis involved in protein catabolic process (14.4%) protein unfolding (13.9%) proteolysis (0.1%)" "HslUV protease complex (14.4%) cytosol (0%) proteasome core complex (0%)" "ATP binding (14.4%) ATP hydrolysis activity (14.4%) peptidase activity (14.4%)" "IPR003959 (16.8%) IPR027417 (16.8%) IPR050052 (16.8%)" "ATPase, AAA-type, core (16.8%) P-loop containing nucleoside triphosphate hydrolase (16.8%) ATP-dependent Clp protease ATP-binding subunit ClpX (16.8%)" SCHADAIHPGYGFLSENATFAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.3.4.14 (91.7%) 6.4.1.7 (8.3%)" "biotin carboxylase (91.7%) 2-oxoglutarate carboxylase (8.3%)" GO:2001295 (17.8%) "GO:0005524 (21.9%) GO:0046872 (21.9%) GO:0004075 (17.8%)" malonyl-CoA biosynthetic process (17.8%) "ATP binding (21.9%) metal ion binding (21.9%) biotin carboxylase activity (17.8%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" LKGNTGENLLALLEGR root "GO:0042274 (19.8%) GO:0006412 (19.6%) GO:0006353 (0.1%)" "GO:0015935 (19.8%) GO:0005840 (0.4%) GO:0005737 (0%)" "GO:0019843 (19.8%) GO:0003735 (19.8%) GO:0016787 (0.3%)" "ribosomal small subunit biogenesis (19.8%) translation (19.6%) DNA-templated transcription termination (0.1%)" "small ribosomal subunit (19.8%) ribosome (0.4%) cytoplasm (0%)" "rRNA binding (19.8%) structural constituent of ribosome (19.8%) hydrolase activity (0.3%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR018079 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, conserved site (16.7%)" INDPFEQLEFGAGYDHCYVLNKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (20%) IPR011013 (20%) IPR014718 (20%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (20%) Galactose mutarotase-like domain superfamily (20%) Glycoside hydrolase-type carbohydrate-binding (20%)" IGAGPIPIETSEGWLLFYHGVLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.4.1.- (50%) 2.4.1.319 (50%)" "Hexosyltransferases (50%) beta-1,4-mannooligosaccharide phosphorylase (50%)" "GO:0016757 (69%) GO:0016798 (31%)" "glycosyltransferase activity (69%) hydrolase activity, acting on glycosyl bonds (31%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" AYELDQLPNEK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae GO:0016740 (100%) transferase activity (100%) "IPR011990 (35.2%) IPR019734 (35.2%) IPR051685 (29.6%)" "Tetratricopeptide-like helical domain superfamily (35.2%) Tetratricopeptide repeat (35.2%) Ycf3/AcsC/BcsC/TPR Multifunctional (29.6%)" CLPFDADEESLTPGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.1%) IPR004154 (11.1%) IPR004499 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Anticodon-binding (11.1%) Proline-tRNA ligase, class IIa, archaeal-type (11.1%)" CVAVDGPASVEVLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.-.- (50%) 1.2.7.3 (50%)" "Acting on the aldehyde or oxo group of donors (50%) 2-oxoglutarate synthase (50%)" GO:0044281 (32%) "GO:0016625 (34%) GO:0030976 (34%)" small molecule metabolic process (32%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (34%) thiamine pyrophosphate binding (34%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" DGEVKDKTVGAVTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.8.4.2 (100%) protein-disulfide reductase (glutathione) (100%) GO:0045454 (33.3%) GO:0005829 (33.3%) "GO:0015035 (31%) GO:0019153 (2.4%)" cell redox homeostasis (33.3%) cytosol (33.3%) "protein-disulfide reductase activity (31%) protein-disulfide reductase (glutathione) activity (2.4%)" "IPR013766 (25.9%) IPR036249 (25.9%) IPR005746 (24.1%)" "Thioredoxin domain (25.9%) Thioredoxin-like superfamily (25.9%) Thioredoxin (24.1%)" SGTVTNEIGNAVK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae "GO:0006417 (16.9%) GO:0006412 (16.2%)" "GO:0015934 (16.2%) GO:0005840 (0.7%) GO:1990904 (0.7%)" "GO:0000049 (16.9%) GO:0003735 (16.2%) GO:0019843 (16.2%)" "regulation of translation (16.9%) translation (16.2%)" "large ribosomal subunit (16.2%) ribosome (0.7%) ribonucleoprotein complex (0.7%)" "tRNA binding (16.9%) structural constituent of ribosome (16.2%) rRNA binding (16.2%)" "IPR016095 (16.9%) IPR023673 (16.9%) IPR023674 (16.9%)" "Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.9%) Large ribosomal subunit protein uL1, conserved site (16.9%) Ribosomal protein uL1-like (16.9%)" TVHSILPMIDVVAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.4.9 (100%) methenyltetrahydrofolate cyclohydrolase (100%) "GO:0003824 (42.9%) GO:0016787 (28.6%) GO:0016740 (21.4%)" "catalytic activity (42.9%) hydrolase activity (28.6%) transferase activity (21.4%)" "IPR007044 (50%) IPR036178 (50%)" "Cyclodeaminase/cyclohydrolase (50%) Formimidoyltransferase-cyclodeaminase-like superfamily (50%)" KVIGHLAHGNLEYKHPYLEDR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0042777 (17.8%) GO:0015986 (0.2%)" "GO:0005886 (19.5%) GO:0045259 (19.5%) GO:0016020 (0.2%)" "GO:0046933 (19.5%) GO:0005524 (17.8%) GO:0016787 (5.3%)" "proton motive force-driven plasma membrane ATP synthesis (17.8%) proton motive force-driven ATP synthesis (0.2%)" "plasma membrane (19.5%) proton-transporting ATP synthase complex (19.5%) membrane (0.2%)" "proton-transporting ATP synthase activity, rotational mechanism (19.5%) ATP binding (17.8%) hydrolase activity (5.3%)" "IPR000131 (34.3%) IPR035968 (34.3%) IPR023632 (31.3%)" "ATP synthase, F1 complex, gamma subunit (34.3%) ATP synthase, F1 complex, gamma subunit superfamily (34.3%) ATP synthase, F1 complex, gamma subunit conserved site (31.3%)" IVINQGLGMATADKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (17.2%) "GO:0005840 (17.2%) GO:1990904 (17.2%)" "GO:0003735 (17.2%) GO:0000049 (15.6%) GO:0019843 (15.6%)" translation (17.2%) "ribosome (17.2%) ribonucleoprotein complex (17.2%)" "structural constituent of ribosome (17.2%) tRNA binding (15.6%) rRNA binding (15.6%)" "IPR002132 (20%) IPR020930 (20%) IPR022803 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5, bacteria (20%) Large ribosomal subunit protein uL5 domain superfamily (20%)" GEPAVFGVSQVIPGWVEALQLMPVGSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" NAFIRPSPSAGSLGGVAR Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.6.5.- (59.6%) 3.6.-.- (30.8%) 2.7.-.- (9.6%)" "Acting on GTP; involved in cellular and subcellular movement (59.6%) Acting on acid anhydrides (30.8%) Transferring phosphorus-containing groups (9.6%)" GO:0005737 (31.6%) "GO:0003924 (31.6%) GO:0005525 (31.6%) GO:0016301 (3.4%)" cytoplasm (31.6%) "GTPase activity (31.6%) GTP binding (31.6%) kinase activity (3.4%)" "IPR005129 (47.8%) IPR027417 (47.8%) IPR003593 (2.5%)" "SIMIBI class G3E GTPase, ArgK/MeaB (47.8%) P-loop containing nucleoside triphosphate hydrolase (47.8%) AAA+ ATPase domain (2.5%)" SFVFPHPTVGEIIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (25%) GO:0005737 (25%) "GO:0004148 (25%) GO:0050660 (25%)" 2-oxoglutarate metabolic process (25%) cytoplasm (25%) "dihydrolipoyl dehydrogenase (NADH) activity (25%) flavin adenine dinucleotide binding (25%)" "IPR001100 (12.5%) IPR004099 (12.5%) IPR006258 (12.5%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (12.5%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.5%) Dihydrolipoamide dehydrogenase (12.5%)" DQKNDTDVDIKKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0015031 (33.3%) GO:0005886 (33.3%) GO:0022857 (33.3%) protein transport (33.3%) plasma membrane (33.3%) transmembrane transporter activity (33.3%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) SLAICTLLDKPSRR root 2.4.2.8 (100%) hypoxanthine phosphoribosyltransferase (100%) "GO:0006178 (10%) GO:0032263 (10%) GO:0032264 (10%)" "GO:0005829 (10%) GO:0032991 (0%)" "GO:0000287 (10%) GO:0004422 (10%) GO:0052657 (10%)" "guanine salvage (10%) GMP salvage (10%) IMP salvage (10%)" "cytosol (10%) protein-containing complex (0%)" "magnesium ion binding (10%) hypoxanthine phosphoribosyltransferase activity (10%) guanine phosphoribosyltransferase activity (10%)" "IPR029057 (25.1%) IPR050408 (25.1%) IPR000836 (25.1%)" "Phosphoribosyltransferase-like (25.1%) Hypoxanthine-guanine phosphoribosyltransferase (25.1%) Phosphoribosyltransferase domain (25.1%)" VLDEHPHVAGFLVEPIQGEAGAYVPDEGYLKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.6.1.13 (100%) ornithine aminotransferase (100%) "GO:0010121 (14.6%) GO:0019544 (14.6%) GO:0055129 (12.3%)" GO:0005737 (14.6%) "GO:0004587 (14.6%) GO:0030170 (14.6%) GO:0042802 (14.6%)" "L-arginine catabolic process to proline via ornithine (14.6%) L-arginine catabolic process to L-glutamate (14.6%) L-proline biosynthetic process (12.3%)" cytoplasm (14.6%) "ornithine aminotransferase activity (14.6%) pyridoxal phosphate binding (14.6%) identical protein binding (14.6%)" "IPR005814 (14.4%) IPR015421 (14.4%) IPR015422 (14.4%)" "Aminotransferase class-III (14.4%) Pyridoxal phosphate-dependent transferase, major domain (14.4%) Pyridoxal phosphate-dependent transferase, small domain (14.4%)" AAYVQESFYVGAENLEALVNIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" EGVLTSYLHDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.-.- (100%) Acting on peptide bonds (peptidases) (100%) GO:0006508 (33.3%) GO:0005829 (33.3%) GO:0008237 (33.3%) proteolysis (33.3%) cytosol (33.3%) metallopeptidase activity (33.3%) "IPR036059 (14.1%) IPR045569 (14.1%) IPR051463 (14.1%)" "Metalloprotease TldD/PmbA superfamily (14.1%) Metalloprotease TldD/E, C-terminal domain (14.1%) Peptidase U62 metalloprotease (14.1%)" LIPNTAISQLESMTLISSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.5.1.2 (100%) pyrroline-5-carboxylate reductase (100%) GO:0055129 (33.3%) GO:0005737 (33.3%) GO:0004735 (33.3%) L-proline biosynthetic process (33.3%) cytoplasm (33.3%) pyrroline-5-carboxylate reductase activity (33.3%) "IPR000304 (20%) IPR008927 (20%) IPR028939 (20%)" "Pyrroline-5-carboxylate reductase-like (20%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (20%) Pyrroline-5-carboxylate reductase, catalytic, N-terminal (20%)" AVVEALNNSFDWLQNDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" IVPEAPHEVLLVLDGSTGQNAFEQAK Muribaculaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Muribaculaceae 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (16.7%) "GO:0005737 (16.7%) GO:0005886 (16.7%)" "GO:0003924 (16.7%) GO:0005047 (16.7%) GO:0005525 (16.7%)" SRP-dependent cotranslational protein targeting to membrane (16.7%) "cytoplasm (16.7%) plasma membrane (16.7%)" "GTPase activity (16.7%) signal recognition particle binding (16.7%) GTP binding (16.7%)" "IPR000897 (14.3%) IPR003593 (14.3%) IPR004390 (14.3%)" "Signal recognition particle, SRP54 subunit, GTPase domain (14.3%) AAA+ ATPase domain (14.3%) Signal-recognition particle receptor FtsY (14.3%)" VKHAQGVDITR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.1.3.1 (51.4%) 6.4.1.1 (40%) 4.1.1.112 (5.7%)" "methylmalonyl-CoA carboxytransferase (51.4%) pyruvate carboxylase (40%) oxaloacetate decarboxylase (5.7%)" GO:0006094 (20.2%) "GO:0005737 (20.2%) GO:0016020 (0.3%)" "GO:0003824 (29.7%) GO:0004736 (22.1%) GO:0047154 (5.7%)" gluconeogenesis (20.2%) "cytoplasm (20.2%) membrane (0.3%)" "catalytic activity (29.7%) pyruvate carboxylase activity (22.1%) methylmalonyl-CoA carboxytransferase activity (5.7%)" "IPR013785 (23.8%) IPR000891 (23.7%) IPR003379 (23%)" "Aldolase-type TIM barrel (23.8%) Pyruvate carboxyltransferase (23.7%) Carboxylase, conserved domain (23%)" NFGNDIQIVGINDLLDAEYLAYMLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.1.- (93.3%) 1.2.1.12 (6.7%)" "With NAD(+) or NADP(+) as acceptor (93.3%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (6.7%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (11.9%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (11.9%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" KQDAIAENGSVVALSYVAAQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" MVPPPLAFDVLDGVMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (25%) GO:0030388 (25%)" "GO:0004332 (25%) GO:0008270 (25%)" "glycolytic process (25%) fructose 1,6-bisphosphate metabolic process (25%)" "fructose-bisphosphate aldolase activity (25%) zinc ion binding (25%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" IISKYEGHIPCELVFQALDNLPEGFTCPAER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.13 (100%) glutamate synthase (NADPH) (100%) "GO:0016740 (90.9%) GO:0004355 (9.1%)" "transferase activity (90.9%) glutamate synthase (NADPH) activity (9.1%)" IPR029044 (100%) Nucleotide-diphospho-sugar transferases (100%) GLLKKDELAFILSPDGSTPAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.13.11.24 (100%) quercetin 2,3-dioxygenase (100%) "GO:0046872 (87.5%) GO:0008127 (12.5%)" "metal ion binding (87.5%) quercetin 2,3-dioxygenase activity (12.5%)" "IPR003829 (20%) IPR011051 (20%) IPR012093 (20%)" "Pirin, N-terminal domain (20%) RmlC-like cupin domain superfamily (20%) Pirin (20%)" VELALANGLTPIFCIGEVLEER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" NVMEIPKIEK root GO:0006412 (16.9%) "GO:0005840 (16.9%) GO:1990904 (16.9%) GO:0005739 (0.3%)" "GO:0003735 (16.9%) GO:0000049 (16%) GO:0019843 (16%)" translation (16.9%) "ribosome (16.9%) ribonucleoprotein complex (16.9%) mitochondrion (0.3%)" "structural constituent of ribosome (16.9%) tRNA binding (16%) rRNA binding (16%)" "IPR002132 (17.2%) IPR022803 (17.2%) IPR031309 (17.2%)" "Large ribosomal subunit protein uL5 (17.2%) Large ribosomal subunit protein uL5 domain superfamily (17.2%) Large ribosomal subunit protein uL5, C-terminal (17.2%)" TVSWYDNEMSYTSQLIR Bacteria Bacteria "1.2.1.- (87%) 1.2.1.12 (13%)" "With NAD(+) or NADP(+) as acceptor (87%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (13%)" GO:0006006 (25%) "GO:0016620 (25%) GO:0050661 (25%) GO:0051287 (25%)" glucose metabolic process (25%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (25%) NADP binding (25%) NAD binding (25%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" GYQTLINNLSEQLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" ILSDPEASDNDKYVAITFLR Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (19.7%) "GO:0046872 (20.3%) GO:0051539 (20.3%) GO:0004333 (19.7%)" tricarboxylic acid cycle (19.7%) "metal ion binding (20.3%) 4 iron, 4 sulfur cluster binding (20.3%) fumarate hydratase activity (19.7%)" "IPR004646 (17%) IPR051208 (17%) IPR004647 (16.6%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (17%) Class-I Fumarase/Tartrate Dehydratase (17%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.6%)" KVTMQNLYHDGGFSSMGMSLR Pseudomonadati Bacteria Pseudomonadati "1.3.1.9 (97.8%) 1.3.1.10 (2.2%)" "enoyl-[acyl-carrier-protein] reductase (NADH) (97.8%) enoyl-[acyl-carrier-protein] reductase (NADPH, Si-specific) (2.2%)" GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" ITTVDSYDEFKEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.1%) IPR004154 (11.1%) IPR004499 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Anticodon-binding (11.1%) Proline-tRNA ligase, class IIa, archaeal-type (11.1%)" ETLEDAVKHPEKYPQLTIR root 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (5.6%) GO:0006950 (0.1%)" "GO:0005829 (39.5%) GO:0005737 (0.1%)" "GO:0008861 (48.6%) GO:0016829 (6%) GO:0016746 (0.2%)" "glucose metabolic process (5.6%) response to stress (0.1%)" "cytosol (39.5%) cytoplasm (0.1%)" "formate C-acetyltransferase activity (48.6%) lyase activity (6%) acyltransferase activity (0.2%)" "IPR001150 (24.4%) IPR050244 (24.4%) IPR019777 (24.3%)" "Glycine radical domain (24.4%) Autonomous Glycyl Radical Cofactor (24.4%) Formate C-acetyltransferase glycine radical, conserved site (24.3%)" VIPYWNETILPR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "5.4.2.11 (97.9%) 5.4.2.- (1.6%) 5.4.2.1 (0.5%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (97.9%) Phosphotransferases (phosphomutases) (1.6%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.5%)" "GO:0006096 (32.7%) GO:0006094 (32.5%) GO:0061621 (0.2%)" "GO:0005737 (0.2%) GO:0005829 (0.2%)" "GO:0004619 (31.7%) GO:0016868 (1.2%) GO:0016853 (0.8%)" "glycolytic process (32.7%) gluconeogenesis (32.5%) canonical glycolysis (0.2%)" "cytoplasm (0.2%) cytosol (0.2%)" "phosphoglycerate mutase activity (31.7%) intramolecular phosphotransferase activity (1.2%) isomerase activity (0.8%)" "IPR005952 (25.5%) IPR029033 (25.5%) IPR013078 (25.2%)" "Phosphoglycerate mutase 1 (25.5%) Histidine phosphatase superfamily (25.5%) Histidine phosphatase superfamily, clade-1 (25.2%)" KENMPKENVER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (31.2%) GO:0005829 (34.4%) GO:0003677 (34.4%) regulation of DNA-templated transcription (31.2%) cytosol (34.4%) DNA binding (34.4%) "IPR002876 (16.7%) IPR017856 (16.7%) IPR026564 (16.7%)" "Transcriptional regulator TACO1-like (16.7%) Integrase-like, N-terminal (16.7%) Transcriptional regulator TACO1-like, domain 3 (16.7%)" EKPLQGEVVAIGNGTKDEEMVLHVGDQVLYGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0051085 (1.3%) GO:0005737 (16.5%) "GO:0005524 (16.5%) GO:0044183 (16.5%) GO:0046872 (16.5%)" obsolete chaperone cofactor-dependent protein refolding (1.3%) cytoplasm (16.5%) "ATP binding (16.5%) protein folding chaperone (16.5%) metal ion binding (16.5%)" "IPR011032 (33.3%) IPR020818 (33.3%) IPR037124 (33.3%)" "GroES-like superfamily (33.3%) GroES chaperonin family (33.3%) GroES chaperonin superfamily (33.3%)" GYDRADVPGAWTIEDGAIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) RAIKPVNEADAEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.3%) "GO:0003746 (25.3%) GO:0005525 (25.3%) GO:0003924 (24.2%)" ribosome disassembly (25.3%) "translation elongation factor activity (25.3%) GTP binding (25.3%) GTPase activity (24.2%)" "IPR000640 (7.6%) IPR005517 (7.6%) IPR009000 (7.6%)" "Elongation factor EFG, domain V-like (7.6%) Translation elongation factor EFG/EF2, domain IV (7.6%) Translation protein, beta-barrel domain superfamily (7.6%)" LKDLETQSQDGTFDKLTKK root "GO:0006412 (32.9%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0022627 (33%) GO:0005840 (0.8%) GO:0005737 (0.1%)" "GO:0003735 (33%) GO:0008270 (0.1%)" "translation (32.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (33%) ribosome (0.8%) cytoplasm (0.1%)" "structural constituent of ribosome (33%) zinc ion binding (0.1%)" "IPR001865 (25%) IPR005706 (25%) IPR023591 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25%)" LAVSQEELAEIAAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009117 (50%) GO:0003824 (50%) nucleotide metabolic process (50%) catalytic activity (50%) "IPR001310 (33.3%) IPR011146 (33.3%) IPR036265 (33.3%)" "Histidine triad (HIT) protein (33.3%) HIT-like domain (33.3%) HIT-like superfamily (33.3%)" TVTNEEVGKEELGGAYTHSSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.4.1.3 (100%) propionyl-CoA carboxylase (100%) GO:0015977 (20%) GO:0009317 (20%) "GO:0004658 (30.5%) GO:0003989 (20%) GO:0016740 (9.5%)" carbon fixation (20%) acetyl-CoA carboxylase complex (20%) "propionyl-CoA carboxylase activity (30.5%) acetyl-CoA carboxylase activity (20%) transferase activity (9.5%)" "IPR011762 (20.4%) IPR029045 (20.4%) IPR034733 (20.4%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20.4%) ClpP/crotonase-like domain superfamily (20.4%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.4%)" AGAGYDNVDLDAATAHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (46.7%) GO:0016616 (33.3%) GO:0004617 (13.3%)" "NAD binding (46.7%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (33.3%) phosphoglycerate dehydrogenase activity (13.3%)" "IPR006139 (25%) IPR006140 (25%) IPR029752 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 (25%)" DAFLAVQELVNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.3%) GO:0006164 (1.1%)" GO:0005737 (20.2%) "GO:0004642 (20.2%) GO:0005524 (19.5%) GO:0046872 (19.5%)" "'de novo' IMP biosynthetic process (19.3%) purine nucleotide biosynthetic process (1.1%)" cytoplasm (20.2%) "phosphoribosylformylglycinamidine synthase activity (20.2%) ATP binding (19.5%) metal ion binding (19.5%)" "IPR010918 (11.3%) IPR036676 (11.3%) IPR029062 (11.3%)" "PurM-like, C-terminal domain (11.3%) PurM-like, C-terminal domain superfamily (11.3%) Class I glutamine amidotransferase-like (11.3%)" AANAEIPIIFLTAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006355 (20%) GO:0000160 (0.2%)" "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" "regulation of DNA-templated transcription (20%) phosphorelay signal transduction system (0.2%)" "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.8%) IPR011006 (16.8%) IPR039420 (16.8%)" "Signal transduction response regulator, receiver domain (16.8%) CheY-like superfamily (16.8%) Transcriptional regulatory protein WalR-like (16.8%)" GYNLFATGGTHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006541 (14.2%) GO:0006221 (13.5%) GO:0006526 (13.5%)" GO:0005737 (14.2%) "GO:0004088 (14.2%) GO:0005524 (14.2%) GO:0046872 (13.5%)" "glutamine metabolic process (14.2%) pyrimidine nucleotide biosynthetic process (13.5%) L-arginine biosynthetic process (13.5%)" cytoplasm (14.2%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14.2%) ATP binding (14.2%) metal ion binding (13.5%)" "IPR005479 (10.4%) IPR011607 (10.4%) IPR036914 (10.4%)" "Carbamoyl phosphate synthase, ATP-binding domain (10.4%) Methylglyoxal synthase-like domain (10.4%) Methylglyoxal synthase-like domain superfamily (10.4%)" AAIEEGIVAGGGVAYIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" IGRDNEIYQFASIGEVNQDLK root 2.3.1.129 (100%) acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (100%) "GO:0009245 (24.7%) GO:0008610 (0.5%)" "GO:0016020 (24.7%) GO:0005737 (24.6%) GO:0005829 (0%)" "GO:0008780 (25.2%) GO:0016746 (0.3%) GO:0042802 (0%)" "lipid A biosynthetic process (24.7%) lipid biosynthetic process (0.5%)" "membrane (24.7%) cytoplasm (24.6%) cytosol (0%)" "acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity (25.2%) acyltransferase activity (0.3%) identical protein binding (0%)" "IPR010137 (16.9%) IPR011004 (16.9%) IPR001451 (16.8%)" "Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (16.9%) Trimeric LpxA-like superfamily (16.9%) Hexapeptide repeat (16.8%)" GYDLEDLAHAILK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.3.1 (100%) citrate (Si)-synthase (100%) "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (25%) "GO:0036440 (22.2%) GO:0046912 (2.8%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (25%) "citrate synthase activity (22.2%) acyltransferase activity, acyl groups converted into alkyl on transfer (2.8%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" LEYQWTNNIGDAHTIGTRPDNGMLSLGVSYR Bacteria Bacteria "GO:0034220 (17.2%) GO:0006811 (5.6%) GO:0006974 (0.2%)" "GO:0009279 (25.1%) GO:0046930 (25.1%) GO:0016020 (0.2%)" "GO:0015288 (25.1%) GO:0015075 (0.2%) GO:0042802 (0.2%)" "monoatomic ion transmembrane transport (17.2%) monoatomic ion transport (5.6%) DNA damage response (0.2%)" "cell outer membrane (25.1%) pore complex (25.1%) membrane (0.2%)" "porin activity (25.1%) monoatomic ion transmembrane transporter activity (0.2%) identical protein binding (0.2%)" "IPR000498 (13.5%) IPR002368 (13.5%) IPR011250 (13.5%)" "Outer membrane protein OmpA-like, transmembrane domain (13.5%) Outer membrane protein, OmpA (13.5%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (13.5%)" LPDQPLAGKPVLIQTSSMGVIGGAR root "1.6.5.2 (97.5%) 1.6.-.- (2.5%)" "NAD(P)H dehydrogenase (quinone) (97.5%) Acting on NADH or NADPH (2.5%)" "GO:0006805 (0.3%) GO:0051289 (0.3%)" GO:0005829 (31.9%) "GO:0010181 (31.9%) GO:0016491 (27.5%) GO:0050446 (3.9%)" "xenobiotic metabolic process (0.3%) protein homotetramerization (0.3%)" cytosol (31.9%) "FMN binding (31.9%) oxidoreductase activity (27.5%) azobenzene reductase (NADP+) activity (3.9%)" "IPR005025 (33.3%) IPR029039 (33.3%) IPR050712 (33.3%)" "NADPH-dependent FMN reductase-like domain (33.3%) Flavoprotein-like superfamily (33.3%) NAD(P)H-dependent reductase (33.3%)" YQGGHNAGHTLVINGEK root 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.6%) GO:0046040 (16.6%) GO:0006164 (0%)" "GO:0005737 (16.6%) GO:0016020 (0%) GO:0005829 (0%)" "GO:0004019 (16.6%) GO:0005525 (16.6%) GO:0000287 (16.5%)" "'de novo' AMP biosynthetic process (16.6%) IMP metabolic process (16.6%) purine nucleotide biosynthetic process (0%)" "cytoplasm (16.6%) membrane (0%) cytosol (0%)" "adenylosuccinate synthase activity (16.6%) GTP binding (16.6%) magnesium ion binding (16.5%)" "IPR001114 (14.4%) IPR027417 (14.4%) IPR042109 (14.4%)" "Adenylosuccinate synthetase (14.4%) P-loop containing nucleoside triphosphate hydrolase (14.4%) Adenylosuccinate synthetase, domain 1 (14.4%)" SGSTPEFMSTHPSDATR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.24.- (100%) Metalloendopeptidases (100%) "GO:0051603 (23.9%) GO:0006515 (1.1%)" GO:0016020 (25%) "GO:0004222 (25%) GO:0046872 (25%)" "proteolysis involved in protein catabolic process (23.9%) protein quality control for misfolded or incompletely synthesized proteins (1.1%)" membrane (25%) "metalloendopeptidase activity (25%) metal ion binding (25%)" "IPR001915 (50%) IPR051156 (50%)" "Peptidase M48 (50%) Mitochondrial and Outer Membrane Metalloprotease (50%)" LLADNKDADLYITQGYICR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.3%) GO:0009090 (17.3%) GO:0009088 (13.5%)" GO:0005829 (17.3%) "GO:0004072 (17.3%) GO:0005524 (17.3%)" "lysine biosynthetic process via diaminopimelate (17.3%) homoserine biosynthetic process (17.3%) threonine biosynthetic process (13.5%)" cytosol (17.3%) "aspartate kinase activity (17.3%) ATP binding (17.3%)" "IPR001048 (14.3%) IPR001341 (14.3%) IPR005260 (14.3%)" "Aspartate/glutamate/uridylate kinase (14.3%) Aspartate kinase (14.3%) Aspartate kinase, monofunctional class (14.3%)" MYETHYGMSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (19.9%) GO:0005829 (19.9%) "GO:0004335 (20.5%) GO:0005524 (19.9%) GO:0046872 (19.9%)" galactose metabolic process (19.9%) cytosol (19.9%) "galactokinase activity (20.5%) ATP binding (19.9%) metal ion binding (19.9%)" "IPR036554 (10.4%) IPR000705 (10.1%) IPR006203 (10.1%)" "GHMP kinase, C-terminal domain superfamily (10.4%) Galactokinase (10.1%) GHMP kinase, ATP-binding, conserved site (10.1%)" SCDLEALPDKERDDCAMR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR019734 (41.4%) IPR011990 (39.1%) IPR051012 (19.5%)" "Tetratricopeptide repeat (41.4%) Tetratricopeptide-like helical domain superfamily (39.1%) Cellulose Synthase/LPS Assembly/PSI Assembly (19.5%)" FAKKPEIAAANIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.2.-.- (100%) Acting on the aldehyde or oxo group of donors (100%) GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.6%) IPR002880 (12.6%) IPR009014 (12.6%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.6%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.6%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.6%)" ACGVELGLPYDMVYR Bacteria Bacteria 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (32.2%) "GO:0003921 (33%) GO:0005524 (33%) GO:0016740 (1.7%)" cytosol (32.2%) "GMP synthase activity (33%) ATP binding (33%) transferase activity (1.7%)" "IPR001674 (16.9%) IPR014729 (16.9%) IPR025777 (16.9%)" "GMP synthase, C-terminal (16.9%) Rossmann-like alpha/beta/alpha sandwich fold (16.9%) GMP synthetase ATP pyrophosphatase domain (16.9%)" EKPLQGEVVAVGNGTKDEEMVLHVGDQVLYGK Phocaeicola massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola massiliensis Phocaeicola massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0044183 (16.7%) GO:0046872 (16.7%)" cytoplasm (16.7%) "ATP binding (16.7%) protein folding chaperone (16.7%) metal ion binding (16.7%)" "IPR011032 (33.3%) IPR020818 (33.3%) IPR037124 (33.3%)" "GroES-like superfamily (33.3%) GroES chaperonin family (33.3%) GroES chaperonin superfamily (33.3%)" GETQSLTSVTLGTK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.3%) GO:0006396 (14.2%) GO:0006401 (0.1%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "mRNA catabolic process (14.3%) RNA processing (14.2%) RNA catabolic process (0.1%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8%) IPR012162 (8%) IPR015847 (8%)" "Exoribonuclease, phosphorolytic domain 1 (8%) Polyribonucleotide nucleotidyltransferase (8%) Exoribonuclease, phosphorolytic domain 2 (8%)" LLLRGDGTSVYMTQDIGTAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.19 (100%) arginine--tRNA ligase (100%) GO:0006420 (24.9%) GO:0005737 (24.7%) "GO:0004814 (24.9%) GO:0005524 (24.9%) GO:0016874 (0.4%)" arginyl-tRNA aminoacylation (24.9%) cytoplasm (24.7%) "arginine-tRNA ligase activity (24.9%) ATP binding (24.9%) ligase activity (0.4%)" "IPR001278 (12.6%) IPR035684 (12.6%) IPR001412 (12.5%)" "Arginine-tRNA ligase (12.6%) Arginyl-tRNA synthetase, catalytic core domain (12.6%) Aminoacyl-tRNA synthetase, class I, conserved site (12.5%)" TILTMPETMSLER Bacteria Bacteria 2.5.1.47 (100%) cysteine synthase (100%) GO:0006535 (40.4%) GO:0005737 (15.4%) "GO:0004124 (40.4%) GO:0016846 (3.8%)" cysteine biosynthetic process from serine (40.4%) cytoplasm (15.4%) "cysteine synthase activity (40.4%) carbon-sulfur lyase activity (3.8%)" "IPR001216 (16.7%) IPR001926 (16.7%) IPR005856 (16.7%)" "Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site (16.7%) Tryptophan synthase beta chain-like, PALP domain (16.7%) Cysteine synthase (16.7%)" IESEIAEFDTYEER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (20.4%) "GO:0005524 (20.4%) GO:0005525 (20.4%) GO:0016887 (20.4%)" cytoplasm (20.4%) "ATP binding (20.4%) GTP binding (20.4%) ATP hydrolysis activity (20.4%)" "IPR004095 (10%) IPR004396 (10%) IPR006073 (10%)" "TGS (10%) Ribosome-binding ATPase YchF/Obg-like ATPase 1 (10%) GTP binding domain (10%)" LKEPLPLAAPMTER Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" GALDCSGVKDR root "GO:0006412 (19.9%) GO:0000028 (0%) GO:0000372 (0%)" "GO:0015935 (19.9%) GO:0005840 (0.5%) GO:0005737 (0%)" "GO:0003735 (19.9%) GO:0019843 (19.8%) GO:0000049 (19.7%)" "translation (19.9%) ribosomal small subunit assembly (0%) Group I intron splicing (0%)" "small ribosomal subunit (19.9%) ribosome (0.5%) cytoplasm (0%)" "structural constituent of ribosome (19.9%) rRNA binding (19.8%) tRNA binding (19.7%)" "IPR005679 (33.3%) IPR006032 (33.3%) IPR012340 (33.2%)" "Ribosomal protein uS12, bacteria (33.3%) Small ribosomal subunit protein uS12 (33.3%) Nucleic acid-binding, OB-fold (33.2%)" GQIEGAVSSSDASTEKLK root 5.3.1.6 (100%) ribose-5-phosphate isomerase (100%) "GO:0006014 (24.9%) GO:0009052 (24.9%)" GO:0005829 (24.9%) "GO:0004751 (25%) GO:0016853 (0.3%) GO:0042802 (0%)" "D-ribose metabolic process (24.9%) pentose-phosphate shunt, non-oxidative branch (24.9%)" cytosol (24.9%) "ribose-5-phosphate isomerase activity (25%) isomerase activity (0.3%) identical protein binding (0%)" "IPR037171 (33.7%) IPR004788 (33.5%) IPR020672 (32.5%)" "NagB/RpiA transferase-like (33.7%) Ribose 5-phosphate isomerase, type A (33.5%) Ribose-5-phosphate isomerase, type A, subgroup (32.5%)" HYVYHCNQAPSLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.1 (100%) alpha-amylase (100%) GO:0005975 (49.7%) "GO:0003824 (33.6%) GO:0016787 (15.4%) GO:0004556 (0.7%)" carbohydrate metabolic process (49.7%) "catalytic activity (33.6%) hydrolase activity (15.4%) alpha-amylase activity (0.7%)" "IPR004300 (33.2%) IPR011330 (33.2%) IPR052046 (33.2%)" "Glycoside hydrolase family 57, N-terminal domain (33.2%) Glycoside hydrolase/deacetylase, beta/alpha-barrel (33.2%) Glycosyl hydrolase family 57 (33.2%)" VLSVGYNGMPIGIDDKK IAEEAFATKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001857 (25%) IPR008991 (25%) IPR018257 (25%)" "Large ribosomal subunit protein bL19 (25%) Translation protein SH3-like domain superfamily (25%) Large ribosomal subunit protein bL19, conserved site (25%)" EVLPPQHNCLHQLWSALSTTEKDQLEQITR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006351 (0.5%) GO:0006355 (0.5%) GO:0006950 (0.5%)" GO:0005829 (0.5%) "GO:0003700 (49.5%) GO:0003677 (47.3%)" "DNA-templated transcription (0.5%) regulation of DNA-templated transcription (0.5%) response to stress (0.5%)" cytosol (0.5%) "DNA-binding transcription factor activity (49.5%) DNA binding (47.3%)" "IPR000835 (25.1%) IPR036388 (25.1%) IPR036390 (25.1%)" "MarR-type HTH domain (25.1%) Winged helix-like DNA-binding domain superfamily (25.1%) Winged helix DNA-binding domain superfamily (25.1%)" FLTFRQDKYAAEYAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.8%) "GO:0005737 (16.8%) GO:0005840 (16.8%) GO:1990904 (16.1%)" "GO:0003735 (16.8%) GO:0070181 (16.8%)" translation (16.8%) "cytoplasm (16.8%) ribosome (16.8%) ribonucleoprotein complex (16.1%)" "structural constituent of ribosome (16.8%) small ribosomal subunit rRNA binding (16.8%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" EQVDKAVEVALKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" DLAQYFPSTILQYVVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022627 (25%) "GO:0003723 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "RNA binding (25%) structural constituent of ribosome (25%)" "IPR000754 (20%) IPR014721 (20%) IPR020568 (20%)" "Small ribosomal subunit protein uS9 (20%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (20%) Ribosomal protein uS5 domain 2-type superfamily (20%)" NVAVVGCSVDSQFSHFAWLNQDKNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" QAILCDVLGITLNDVIEDAKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006207 (16.7%) GO:0006520 (16.7%) GO:0044205 (16.7%)" GO:0005829 (16.7%) "GO:0004070 (16.7%) GO:0016597 (16.7%)" "'de novo' pyrimidine nucleobase biosynthetic process (16.7%) amino acid metabolic process (16.7%) 'de novo' UMP biosynthetic process (16.7%)" cytosol (16.7%) "aspartate carbamoyltransferase activity (16.7%) amino acid binding (16.7%)" "IPR002082 (20%) IPR006130 (20%) IPR006131 (20%)" "Aspartate carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%)" MLQESVDSLFDNSR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.3%) "GO:0000428 (17.3%) GO:0031981 (0.3%)" "GO:0003677 (17.3%) GO:0003899 (17.3%) GO:0000287 (13.8%)" DNA-templated transcription (17.3%) "DNA-directed RNA polymerase complex (17.3%) nuclear lumen (0.3%)" "DNA binding (17.3%) DNA-directed RNA polymerase activity (17.3%) magnesium ion binding (13.8%)" "IPR007080 (9.2%) IPR045867 (9.2%) IPR000722 (9.2%)" "RNA polymerase Rpb1, domain 1 (9.2%) DNA-directed RNA polymerase, subunit beta-prime (9.2%) RNA polymerase, alpha subunit (9.2%)" YNEGLYHIVNLSAEDDKAINEFDR Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus GO:0006412 (16.5%) "GO:0005840 (17.7%) GO:0005737 (16.5%) GO:1990904 (16.5%)" "GO:0003735 (16.5%) GO:0070181 (16.5%)" translation (16.5%) "ribosome (17.7%) cytoplasm (16.5%) ribonucleoprotein complex (16.5%)" "structural constituent of ribosome (16.5%) small ribosomal subunit rRNA binding (16.5%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" EACYDKAYAIAASGNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.4%) GO:0006402 (14.4%)" GO:0005829 (14.4%) "GO:0000175 (14.4%) GO:0003723 (14.4%) GO:0004654 (14.4%)" "RNA processing (14.4%) mRNA catabolic process (14.4%)" cytosol (14.4%) "3'-5'-RNA exonuclease activity (14.4%) RNA binding (14.4%) polyribonucleotide nucleotidyltransferase activity (14.4%)" "IPR001247 (8%) IPR012162 (8%) IPR015847 (8%)" "Exoribonuclease, phosphorolytic domain 1 (8%) Polyribonucleotide nucleotidyltransferase (8%) Exoribonuclease, phosphorolytic domain 2 (8%)" REIGHGNLAHR Pseudomonadati Bacteria Pseudomonadati 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.4%) GO:0006396 (13.6%)" GO:0005829 (14.4%) "GO:0000175 (14.4%) GO:0003723 (14.4%) GO:0004654 (14.4%)" "mRNA catabolic process (14.4%) RNA processing (13.6%)" cytosol (14.4%) "3'-5'-RNA exonuclease activity (14.4%) RNA binding (14.4%) polyribonucleotide nucleotidyltransferase activity (14.4%)" "IPR001247 (8.2%) IPR012162 (8.2%) IPR020568 (8.2%)" "Exoribonuclease, phosphorolytic domain 1 (8.2%) Polyribonucleotide nucleotidyltransferase (8.2%) Ribosomal protein uS5 domain 2-type superfamily (8.2%)" LQMGGSDQWGNITTGAELIRR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) "GO:0006437 (16.7%) GO:0043039 (0.1%)" GO:0005829 (16.7%) "GO:0003723 (16.7%) GO:0004831 (16.7%) GO:0005524 (16.7%)" "tyrosyl-tRNA aminoacylation (16.7%) tRNA aminoacylation (0.1%)" cytosol (16.7%) "RNA binding (16.7%) tyrosine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002305 (12.6%) IPR002307 (12.6%) IPR024088 (12.6%)" "Aminoacyl-tRNA synthetase, class Ic (12.6%) Tyrosine-tRNA ligase (12.6%) Tyrosine-tRNA ligase, bacterial-type (12.6%)" STGSEYPYVDLYYTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR027304 (33.3%) IPR046357 (33.3%) IPR052029 (33.3%)" "Trigger factor/SurA domain superfamily (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) Periplasmic chaperone PpiD (33.3%)" TNECMYSELTTDHPIDLCR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (50%) GO:0004332 (50%) glycolytic process (50%) fructose-bisphosphate aldolase activity (50%) "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" AMKPILEDLKQQVGEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" GNAAIAEEFGKNVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.37 (93.3%) 1.1.1.- (6.7%)" "malate dehydrogenase (93.3%) With NAD(+) or NADP(+) as acceptor (6.7%)" "GO:0006108 (33%) GO:0006099 (1.3%) GO:0019752 (0.3%)" GO:0005737 (1.3%) "GO:0016615 (29.8%) GO:0016616 (29.8%) GO:0030060 (4.4%)" "malate metabolic process (33%) tricarboxylic acid cycle (1.3%) carboxylic acid metabolic process (0.3%)" cytoplasm (1.3%) "malate dehydrogenase activity (29.8%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (29.8%) L-malate dehydrogenase (NAD+) activity (4.4%)" "IPR001236 (17.1%) IPR036291 (17.1%) IPR001557 (16.5%)" "Lactate/malate dehydrogenase, N-terminal (17.1%) NAD(P)-binding domain superfamily (17.1%) L-lactate/malate dehydrogenase (16.5%)" IVEESPSPFLTADLRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.14 (100%) biotin carboxylase (100%) GO:2001295 (12.5%) "GO:0005524 (25%) GO:0046872 (25%) GO:0003989 (12.5%)" malonyl-CoA biosynthetic process (12.5%) "ATP binding (25%) metal ion binding (25%) acetyl-CoA carboxylase activity (12.5%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" AHASTALIADYFDTDNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" VTITIAADSIETAVKSELVNVAKK Bacteria Bacteria 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.5%) GO:0043335 (12.4%) GO:0051083 (12.4%)" "GO:0005737 (12.1%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003755 (12.4%) GO:0043022 (12.4%) GO:0044183 (12.4%)" "protein transport (12.5%) protein unfolding (12.4%) 'de novo' cotranslational protein folding (12.4%)" "cytoplasm (12.1%) cytosol (0%) membrane (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.4%) ribosome binding (12.4%) protein folding chaperone (12.4%)" "IPR008881 (12.7%) IPR036611 (12.7%) IPR005215 (12.7%)" "Trigger factor, ribosome-binding, bacterial (12.7%) Trigger factor ribosome-binding domain superfamily (12.7%) Trigger factor (12.7%)" SIEVLGEAAKDVYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (50%) GO:0004356 (50%) glutamine biosynthetic process (50%) glutamine synthetase activity (50%) "IPR008146 (14.3%) IPR008147 (14.3%) IPR014746 (14.3%)" "Glutamine synthetase, catalytic domain (14.3%) Glutamine synthetase, N-terminal domain (14.3%) Glutamine synthetase/guanido kinase, catalytic domain (14.3%)" DKDAVSACCLIAEVAAWAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.2.2 (64.3%) 5.4.2.- (28.6%) 5.4.2.8 (7.1%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (64.3%) Phosphotransferases (phosphomutases) (28.6%) phosphomannomutase (7.1%)" "GO:0005975 (23.8%) GO:0006166 (23.8%)" "GO:0000287 (23.8%) GO:0008973 (23.8%) GO:0004614 (4.6%)" "carbohydrate metabolic process (23.8%) purine ribonucleoside salvage (23.8%)" "magnesium ion binding (23.8%) phosphopentomutase activity (23.8%) phosphoglucomutase activity (4.6%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" NLAPSGVTFVIVKDDAVGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.8%) GO:0008615 (19.8%)" GO:0005737 (19.8%) "GO:0004648 (19.8%) GO:0030170 (19.8%) GO:0008483 (1.2%)" "L-serine biosynthetic process (19.8%) pyridoxine biosynthetic process (19.8%)" cytoplasm (19.8%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.8%) pyridoxal phosphate binding (19.8%) transaminase activity (1.2%)" "IPR000192 (20%) IPR015421 (20%) IPR015422 (20%)" "Aminotransferase class V domain (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" ITIGLASPEEILENSSGEVLKPETINYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.3%) GO:0000428 (17.3%) "GO:0003677 (17.3%) GO:0003899 (17.3%) GO:0000287 (15%)" DNA-templated transcription (17.3%) DNA-directed RNA polymerase complex (17.3%) "DNA binding (17.3%) DNA-directed RNA polymerase activity (17.3%) magnesium ion binding (15%)" "IPR007080 (9.6%) IPR044893 (9.6%) IPR045867 (9.6%)" "RNA polymerase Rpb1, domain 1 (9.6%) RNA polymerase Rpb1, clamp domain superfamily (9.6%) DNA-directed RNA polymerase, subunit beta-prime (9.6%)" IENNIDLPSLAPLIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.11.1.23 (100%) (S)-2-hydroxypropylphosphonic acid epoxidase (100%) GO:0006355 (0.4%) GO:0005829 (32%) "GO:0003677 (32.7%) GO:0003700 (32.4%) GO:0004601 (2.5%)" regulation of DNA-templated transcription (0.4%) cytosol (32%) "DNA binding (32.7%) DNA-binding transcription factor activity (32.4%) peroxidase activity (2.5%)" "IPR001387 (16.7%) IPR010982 (16.7%) IPR011051 (16.7%)" "Cro/C1-type, helix-turn-helix domain (16.7%) Lambda repressor-like, DNA-binding domain superfamily (16.7%) RmlC-like cupin domain superfamily (16.7%)" GQIEYIPFPDKLK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 5.1.3.20 (100%) ADP-glyceromanno-heptose 6-epimerase (100%) "GO:0097171 (19.5%) GO:0009244 (16.1%) GO:0005975 (10%)" "GO:0005829 (0.2%) GO:0016020 (0.2%)" "GO:0008712 (27.1%) GO:0050661 (25.9%) GO:0016853 (0.8%)" "ADP-L-glycero-beta-D-manno-heptose biosynthetic process (19.5%) lipopolysaccharide core region biosynthetic process (16.1%) carbohydrate metabolic process (10%)" "cytosol (0.2%) membrane (0.2%)" "ADP-glyceromanno-heptose 6-epimerase activity (27.1%) NADP binding (25.9%) isomerase activity (0.8%)" "IPR036291 (34.1%) IPR001509 (33.7%) IPR011912 (32.2%)" "NAD(P)-binding domain superfamily (34.1%) NAD-dependent epimerase/dehydratase (33.7%) ADP-L-glycero-D-manno-heptose-6-epimerase (32.2%)" IFTSLSQEEVEALTAEHAEAPHLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "6.1.1.1 (92.3%) 6.1.1.- (7.7%)" "tyrosine--tRNA ligase (92.3%) Ligases forming aminoacyl-tRNA and related compounds (7.7%)" "GO:0006437 (16%) GO:0006418 (1.3%)" GO:0005829 (17.3%) "GO:0004831 (17.3%) GO:0005524 (17.3%) GO:0003723 (16%)" "tyrosyl-tRNA aminoacylation (16%) tRNA aminoacylation for protein translation (1.3%)" cytosol (17.3%) "tyrosine-tRNA ligase activity (17.3%) ATP binding (17.3%) RNA binding (16%)" "IPR002305 (13.3%) IPR024088 (13.3%) IPR001412 (12.2%)" "Aminoacyl-tRNA synthetase, class Ic (13.3%) Tyrosine-tRNA ligase, bacterial-type (13.3%) Aminoacyl-tRNA synthetase, class I, conserved site (12.2%)" MLESAYNER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.4.24.55 (66.7%) 3.4.24.- (33.3%)" "pitrilysin (66.7%) Metalloendopeptidases (33.3%)" GO:0006508 (33.7%) "GO:0004222 (33.7%) GO:0046872 (32.6%)" proteolysis (33.7%) "metalloendopeptidase activity (33.7%) metal ion binding (32.6%)" "IPR001431 (20.1%) IPR007863 (20.1%) IPR011765 (20.1%)" "Peptidase M16, zinc-binding site (20.1%) Peptidase M16, C-terminal (20.1%) Peptidase M16, N-terminal (20.1%)" DAKDQAGIDKIMIDLDGTENK root "4.2.1.11 (99.8%) 6.3.4.2 (0.2%)" "phosphopyruvate hydratase (99.8%) CTP synthase (glutamine hydrolyzing) (0.2%)" "GO:0006096 (16.7%) GO:0006396 (0%) GO:0006401 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.6%) GO:0009986 (15.8%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" "glycolytic process (16.7%) RNA processing (0%) RNA catabolic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.6%) cell surface (15.8%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020811 (16.8%) IPR029017 (16.8%)" "Enolase (16.8%) Enolase, N-terminal (16.8%) Enolase-like, N-terminal (16.8%)" VVCEVLSPLVKGDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16%) GO:0003723 (0.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16%) RNA binding (0.7%)" "IPR001787 (33.3%) IPR028909 (33.3%) IPR036164 (33.3%)" "Large ribosomal subunit protein bL21 (33.3%) Large ribosomal subunit protein bL21-like (33.3%) Large ribosomal subunit protein bL21-like superfamily (33.3%)" TREGNDLYGEMAESGVLNK Butyricicoccus intestinisimiae Bacteria Bacillati Bacillota Clostridia Eubacteriales Butyricicoccaceae Butyricicoccus Butyricicoccus intestinisimiae VIDTPPVTAVAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0005886 (53.5%) GO:0045121 (46.5%)" "plasma membrane (53.5%) membrane raft (46.5%)" IPR022853 (100%) Flotillin-like protein FloA (100%) LAQDIFEYTGR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (71.4%) GO:0004340 (28.6%)" "kinase activity (71.4%) glucokinase activity (28.6%)" "IPR000600 (34%) IPR049874 (34%) IPR043129 (31.9%)" "ROK family (34%) ROK, conserved site (34%) ATPase, nucleotide binding domain (31.9%)" WKLDGEGMSSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" FNDGTHYNYVPGSGDLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.2.1.49 (75%) 3.2.1.- (25%)" "alpha-N-acetylgalactosaminidase (75%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (25%)" "GO:0000166 (50%) GO:0016798 (41.7%) GO:0008456 (8.3%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (41.7%) alpha-N-acetylgalactosaminidase activity (8.3%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" MFQVEDARPYAEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016226 (17.2%) "GO:0005524 (17.2%) GO:0051539 (17.2%) GO:0140663 (17.2%)" iron-sulfur cluster assembly (17.2%) "ATP binding (17.2%) 4 iron, 4 sulfur cluster binding (17.2%) ATP-dependent FeS chaperone activity (17.2%)" "IPR019591 (17.1%) IPR033756 (17.1%) IPR044304 (17.1%)" "Mrp/NBP35 ATP-binding protein (17.1%) Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 (17.1%) Iron-sulfur protein NUBPL-like (17.1%)" DLDPDEITSKDVYDAAMKNDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.2 (100%) glucokinase (100%) GO:0004340 (100%) glucokinase activity (100%) "IPR000600 (33.3%) IPR043129 (33.3%) IPR049874 (33.3%)" "ROK family (33.3%) ATPase, nucleotide binding domain (33.3%) ROK, conserved site (33.3%)" TQGTLENLNIYLVGDLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006207 (16.6%) GO:0006520 (16.6%) GO:0044205 (16.6%)" "GO:0005829 (16.6%) GO:0016020 (0.1%)" "GO:0004070 (16.6%) GO:0016597 (16.6%)" "'de novo' pyrimidine nucleobase biosynthetic process (16.6%) amino acid metabolic process (16.6%) 'de novo' UMP biosynthetic process (16.6%)" "cytosol (16.6%) membrane (0.1%)" "aspartate carbamoyltransferase activity (16.6%) amino acid binding (16.6%)" "IPR002082 (20%) IPR006130 (20%) IPR006131 (20%)" "Aspartate carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%)" EVFHLYGFQQIETPAMENLSTLMGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.21 (100%) histidine--tRNA ligase (100%) GO:0006427 (25%) GO:0005737 (25%) "GO:0004821 (25%) GO:0005524 (25%)" histidyl-tRNA aminoacylation (25%) cytoplasm (25%) "histidine-tRNA ligase activity (25%) ATP binding (25%)" "IPR004154 (12.5%) IPR004516 (12.5%) IPR006195 (12.5%)" "Anticodon-binding (12.5%) Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit (12.5%) Aminoacyl-tRNA synthetase, class II (12.5%)" MGLPVGETPTLGPWR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.7%) GO:0044210 (11.7%)" "GO:0005829 (11.7%) GO:0097268 (11.7%)" "GO:0003883 (11.7%) GO:0005524 (11.7%) GO:0042802 (11.7%)" "pyrimidine nucleobase biosynthetic process (11.7%) 'de novo' CTP biosynthetic process (11.7%)" "cytosol (11.7%) cytoophidium (11.7%)" "CTP synthase activity (11.7%) ATP binding (11.7%) identical protein binding (11.7%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" NGDGSPVECVIADSTIGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR005763 (11.2%) IPR012888 (11.2%) IPR012889 (11.2%)" "L-fucose isomerase (11.2%) L-fucose isomerase, N-terminal-1 (11.2%) L-fucose isomerase, N-terminal-2 (11.2%)" GVLKPGVELVEPTSGNTGIALAYVAAAR root "2.5.1.47 (99.9%) 4.5.1.5 (0.1%)" "cysteine synthase (99.9%) S-carboxymethylcysteine synthase (0.1%)" "GO:0006535 (45.5%) GO:0006534 (0.1%) GO:0009069 (0.1%)" "GO:0005737 (0.1%) GO:0005829 (0.1%) GO:0009333 (0.1%)" "GO:0004124 (45.1%) GO:0016829 (5.7%) GO:0016765 (0.8%)" "cysteine biosynthetic process from serine (45.5%) cysteine metabolic process (0.1%) obsolete serine family amino acid metabolic process (0.1%)" "cytoplasm (0.1%) cytosol (0.1%) cysteine synthase complex (0.1%)" "cysteine synthase activity (45.1%) lyase activity (5.7%) transferase activity, transferring alkyl or aryl (other than methyl) groups (0.8%)" "IPR001926 (17%) IPR050214 (17%) IPR036052 (16.9%)" "Tryptophan synthase beta chain-like, PALP domain (17%) Cysteine synthase/Cystathionine beta-synthase (17%) Tryptophan synthase beta chain-like, PALP domain superfamily (16.9%)" ELNSDAIKEWKDLVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (51.5%) IPR019734 (48.5%)" "Tetratricopeptide-like helical domain superfamily (51.5%) Tetratricopeptide repeat (48.5%)" EKADQFAAELSNSGADVRPVYFSATELK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "1.1.1.- (66.7%) 1.1.1.159 (33.3%)" "With NAD(+) or NADP(+) as acceptor (66.7%) 7alpha-hydroxysteroid dehydrogenase (33.3%)" "GO:0016042 (12.5%) GO:0030573 (12.5%)" "GO:0016491 (62.5%) GO:0008709 (12.5%)" "lipid catabolic process (12.5%) bile acid catabolic process (12.5%)" "oxidoreductase activity (62.5%) cholate 7-alpha-dehydrogenase (NAD+) activity (12.5%)" "IPR002347 (36.1%) IPR036291 (36.1%) IPR050259 (27.9%)" "Short-chain dehydrogenase/reductase SDR (36.1%) NAD(P)-binding domain superfamily (36.1%) Short-chain dehydrogenases/reductases (27.9%)" EYVEKGDKPGEER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.2.1 (100%) DNA topoisomerase (100%) GO:0006265 (25%) "GO:0003677 (25%) GO:0003917 (25%) GO:0046872 (25%)" DNA topological change (25%) "DNA binding (25%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25%) metal ion binding (25%)" "IPR000380 (7.1%) IPR003601 (7.1%) IPR003602 (7.1%)" "DNA topoisomerase, type IA (7.1%) DNA topoisomerase, type IA, domain 2 (7.1%) DNA topoisomerase, type IA, DNA-binding domain (7.1%)" VADAFFGEDVPAETLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.3.1 (100%) threonine synthase (100%) "GO:0009088 (32.9%) GO:0006520 (0.4%)" "GO:0004795 (33.3%) GO:0030170 (33.3%)" "threonine biosynthetic process (32.9%) amino acid metabolic process (0.4%)" "threonine synthase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000634 (14.3%) IPR029144 (14.3%) IPR036052 (14.3%)" "Serine/threonine dehydratase, pyridoxal-phosphate-binding site (14.3%) Threonine synthase, N-terminal (14.3%) Tryptophan synthase beta chain-like, PALP domain superfamily (14.3%)" FRPGTDEGDYQVK root 6.1.1.3 (100%) threonine--tRNA ligase (100%) "GO:0032790 (19.9%) GO:0006435 (0%) GO:0001731 (0%)" "GO:0005829 (19.9%) GO:0016020 (19.9%) GO:0005840 (0%)" "GO:0003743 (20.1%) GO:0043022 (19.9%) GO:0004829 (0%)" "ribosome disassembly (19.9%) threonyl-tRNA aminoacylation (0%) formation of translation preinitiation complex (0%)" "cytosol (19.9%) membrane (19.9%) ribosome (0%)" "translation initiation factor activity (20.1%) ribosome binding (19.9%) threonine-tRNA ligase activity (0%)" "IPR001288 (17.3%) IPR019815 (17.3%) IPR036788 (17.3%)" "Translation initiation factor 3 (17.3%) Translation initiation factor 3, C-terminal (17.3%) Translation initiation factor 3 (IF-3), C-terminal domain superfamily (17.3%)" TMNTPHGDAITVFDLR Pseudomonadati Bacteria Pseudomonadati 4.4.1.21 (100%) S-ribosylhomocysteine lyase (100%) "GO:0009372 (32.7%) GO:0019284 (0.2%) GO:2000145 (0.1%)" "GO:0005829 (0.2%) GO:0016020 (0.2%)" "GO:0005506 (32.7%) GO:0043768 (32.7%) GO:0016787 (0.9%)" "quorum sensing (32.7%) L-methionine salvage from S-adenosylmethionine (0.2%) regulation of cell motility (0.1%)" "cytosol (0.2%) membrane (0.2%)" "iron ion binding (32.7%) S-ribosylhomocysteine lyase activity (32.7%) hydrolase activity (0.9%)" "IPR003815 (33.3%) IPR011249 (33.3%) IPR037005 (33.3%)" "S-ribosylhomocysteinase (LuxS) (33.3%) Metalloenzyme, LuxS/M16 peptidase-like (33.3%) S-ribosylhomocysteinase (LuxS) superfamily (33.3%)" ASNQGEPVILDINADAGKAYADTVER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0051782 (16.4%) GO:0000917 (15.6%) GO:0000918 (0.2%)" "GO:0005829 (16.6%) GO:0009898 (16.6%) GO:0005886 (0.2%)" "GO:0005524 (16.6%) GO:0016887 (16.6%) GO:0042802 (0.2%)" "negative regulation of cell division (16.4%) division septum assembly (15.6%) division septum site selection (0.2%)" "cytosol (16.6%) cytoplasmic side of plasma membrane (16.6%) plasma membrane (0.2%)" "ATP binding (16.6%) ATP hydrolysis activity (16.6%) identical protein binding (0.2%)" "IPR027417 (20.5%) IPR050625 (20.5%) IPR010223 (19.8%)" "P-loop containing nucleoside triphosphate hydrolase (20.5%) ParA/MinD ATPase (20.5%) ATP binding protein MinD (19.8%)" VVIGHDCR Bacteria Bacteria "5.4.2.2 (81.8%) 5.4.2.- (13.6%) 5.4.2.8 (4.5%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (81.8%) Phosphotransferases (phosphomutases) (13.6%) phosphomannomutase (4.5%)" "GO:0005975 (23.9%) GO:0006166 (23.6%)" GO:0016020 (0.3%) "GO:0000287 (23.6%) GO:0008973 (23.6%) GO:0004614 (4.4%)" "carbohydrate metabolic process (23.9%) purine ribonucleoside salvage (23.6%)" membrane (0.3%) "magnesium ion binding (23.6%) phosphopentomutase activity (23.6%) phosphoglucomutase activity (4.4%)" "IPR005844 (12.9%) IPR016055 (12.9%) IPR005845 (12.7%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.9%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (12.9%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.7%)" VEKFEELINER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.6.1.1 (73.1%) 2.6.1.- (26.9%)" "aspartate transaminase (73.1%) Transaminases (26.9%)" GO:0006520 (33.2%) "GO:0030170 (33.2%) GO:0008483 (28%) GO:0004069 (5.5%)" amino acid metabolic process (33.2%) "pyridoxal phosphate binding (33.2%) transaminase activity (28%) L-aspartate:2-oxoglutarate aminotransferase activity (5.5%)" "IPR004839 (20.1%) IPR050596 (20.1%) IPR015421 (20%)" "Aminotransferase, class I/classII, large domain (20.1%) Aspartate/prephenate aminotransferase-like (20.1%) Pyridoxal phosphate-dependent transferase, major domain (20%)" STGFYQLIEFKAEPQVIEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (17%) "GO:0005737 (17%) GO:0005840 (17%) GO:1990904 (15.1%)" "GO:0003735 (17%) GO:0070181 (17%)" translation (17%) "cytoplasm (17%) ribosome (17%) ribonucleoprotein complex (15.1%)" "structural constituent of ribosome (17%) small ribosomal subunit rRNA binding (17%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" GIVAVPEIGEVYEGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (8.3%) IPR003029 (8.3%) IPR004087 (8.3%)" "Exoribonuclease, phosphorolytic domain 1 (8.3%) S1 domain (8.3%) K Homology domain (8.3%)" ILAGIQAPTSGSVSVPR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005524 (33.3%) GO:0016887 (33.3%) GO:0003677 (32.1%)" "ATP binding (33.3%) ATP hydrolysis activity (33.3%) DNA binding (32.1%)" "IPR003439 (12.6%) IPR003593 (12.6%) IPR017871 (12.6%)" "ABC transporter-like, ATP-binding domain (12.6%) AAA+ ATPase domain (12.6%) ABC transporter-like, conserved site (12.6%)" LDRNTTGVLLLTNDGDLASK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.99.- (98.6%) 5.4.99.22 (1.4%)" "Transferring other groups (98.6%) 23S rRNA pseudouridine(2605) synthase (1.4%)" "GO:0000455 (31.6%) GO:0001522 (1.2%) GO:0006364 (1.2%)" "GO:0003723 (32.8%) GO:0120159 (31.6%) GO:0009982 (0.9%)" "enzyme-directed rRNA pseudouridine synthesis (31.6%) pseudouridine synthesis (1.2%) rRNA processing (1.2%)" "RNA binding (32.8%) rRNA pseudouridine synthase activity (31.6%) pseudouridine synthase activity (0.9%)" "IPR006145 (11.2%) IPR018496 (11.2%) IPR050343 (11.2%)" "Pseudouridine synthase, RsuA/RluA-like (11.2%) Pseudouridine synthase, RsuA/RluB/E/F, conserved site (11.2%) Ribosomal RNA Pseudouridine Synthase RsuA (11.2%)" RVGGSTYQVPVEVRPVRR root "GO:0006412 (19.9%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0015935 (19.8%) GO:0005840 (0.3%) GO:0022627 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.9%) GO:0000049 (19.7%)" "translation (19.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "small ribosomal subunit (19.8%) ribosome (0.3%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%) tRNA binding (19.7%)" "IPR005717 (20.1%) IPR023798 (20.1%) IPR036823 (20.1%)" "Small ribosomal subunit protein uS7, bacteria/organella (20.1%) Small ribosomal subunit protein uS7 domain (20.1%) Small ribosomal subunit protein uS7 domain superfamily (20.1%)" DAVIPGLQKDYEEDFKTALLR root GO:0008652 (16.7%) "GO:0005737 (16.7%) GO:0005829 (16.7%)" "GO:0004674 (16.7%) GO:0008899 (16.7%) GO:0016491 (16.7%)" amino acid biosynthetic process (16.7%) "cytoplasm (16.7%) cytosol (16.7%)" "protein serine/threonine kinase activity (16.7%) homoserine O-succinyltransferase activity (16.7%) oxidoreductase activity (16.7%)" "IPR009383 (48.9%) IPR038134 (48.7%) IPR001853 (0.2%)" "Protein of unknown function DUF1040 (48.9%) YihD-like superfamily (48.7%) DSBA-like thioredoxin domain (0.2%)" GTCNHFGVTNDVDLIMGTFSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.50 (100%) serine C-palmitoyltransferase (100%) GO:0030148 (22.6%) GO:0016020 (22.6%) "GO:0030170 (25.8%) GO:0008483 (12.9%) GO:0016740 (9.7%)" sphingolipid biosynthetic process (22.6%) membrane (22.6%) "pyridoxal phosphate binding (25.8%) transaminase activity (12.9%) transferase activity (9.7%)" "IPR001917 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class-II, pyridoxal-phosphate binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" LIHHADEVAEAYTTAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "6.3.4.14 (92.3%) 6.4.1.7 (7.7%)" "biotin carboxylase (92.3%) 2-oxoglutarate carboxylase (7.7%)" GO:2001295 (17.8%) "GO:0005524 (21.9%) GO:0046872 (21.9%) GO:0004075 (17.8%)" malonyl-CoA biosynthetic process (17.8%) "ATP binding (21.9%) metal ion binding (21.9%) biotin carboxylase activity (17.8%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" GAPEGFVAPVTPGR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20.1%) "GO:0022625 (20.1%) GO:0005840 (0.3%)" "GO:0003735 (20.1%) GO:0019843 (20.1%) GO:0000049 (19.4%)" translation (20.1%) "cytosolic large ribosomal subunit (20.1%) ribosome (0.3%)" "structural constituent of ribosome (20.1%) rRNA binding (20.1%) tRNA binding (19.4%)" "IPR000114 (20%) IPR016180 (20%) IPR020798 (20%)" "Large ribosomal subunit protein uL16, bacteria (20%) Large ribosomal subunit protein uL16 domain (20%) Large ribosomal subunit protein uL16, conserved site (20%)" SHMFVTGPDVVK root "6.4.1.3 (53.8%) 6.-.-.- (46.2%)" "propionyl-CoA carboxylase (53.8%) Ligases (46.2%)" "GO:0015977 (20.1%) GO:0006633 (1.6%) GO:0009062 (1.3%)" "GO:0009317 (21.6%) GO:0005739 (1.3%)" "GO:0004658 (24.3%) GO:0003989 (21.4%) GO:0016740 (8.4%)" "carbon fixation (20.1%) fatty acid biosynthetic process (1.6%) fatty acid catabolic process (1.3%)" "acetyl-CoA carboxylase complex (21.6%) mitochondrion (1.3%)" "propionyl-CoA carboxylase activity (24.3%) acetyl-CoA carboxylase activity (21.4%) transferase activity (8.4%)" "IPR011762 (19.7%) IPR011763 (19.7%) IPR029045 (19.7%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (19.7%) Acetyl-coenzyme A carboxyltransferase, C-terminal (19.7%) ClpP/crotonase-like domain superfamily (19.7%)" ELLSFLPSNNMEDAPVIACADDVRR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (22.2%) GO:0009317 (22.2%) "GO:0003989 (22.2%) GO:0004658 (22.2%) GO:0016740 (11.1%)" carbon fixation (22.2%) acetyl-CoA carboxylase complex (22.2%) "acetyl-CoA carboxylase activity (22.2%) propionyl-CoA carboxylase activity (22.2%) transferase activity (11.1%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" TEGYSEGNVPLQTLR Bacillota Bacteria Bacillati Bacillota GO:0006412 (20%) GO:0022627 (20%) "GO:0003729 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) cytosolic small ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001351 (11.1%) IPR004044 (11.1%) IPR004087 (11.1%)" "Small ribosomal subunit protein uS3, C-terminal (11.1%) K Homology domain, type 2 (11.1%) K Homology domain (11.1%)" KLLVVLPEANK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (19.3%) GO:0003723 (0.7%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (19.3%) RNA binding (0.7%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" LGNFLFDTQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" AVPDVQAALNEAEEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (43.8%) "GO:0004493 (43.8%) GO:0016829 (6.3%) GO:0051213 (6.3%)" L-methylmalonyl-CoA metabolic process (43.8%) "methylmalonyl-CoA epimerase activity (43.8%) lyase activity (6.3%) dioxygenase activity (6.3%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" MIQEQTMLNVADNSGARR root "GO:0006412 (24.9%) GO:0002181 (0%)" "GO:0022625 (24.7%) GO:0005840 (0.4%) GO:1990904 (0.1%)" "GO:0003735 (24.9%) GO:0070180 (24.7%) GO:0019843 (0.1%)" "translation (24.9%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.7%) ribosome (0.4%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.9%) large ribosomal subunit rRNA binding (24.7%) rRNA binding (0.1%)" "IPR000218 (25.1%) IPR036853 (25.1%) IPR005745 (24.7%)" "Large ribosomal subunit protein uL14 (25.1%) Large ribosomal subunit protein uL14 superfamily (25.1%) Large ribosomal subunit protein uL14, bacteria (24.7%)" KVIMSAPSK root "1.2.1.- (85.4%) 1.2.1.12 (14.6%)" "With NAD(+) or NADP(+) as acceptor (85.4%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (14.6%)" "GO:0006006 (15.6%) GO:0006096 (15.6%)" "GO:0005737 (14%) GO:0005829 (0.4%)" "GO:0051287 (19.4%) GO:0050661 (15.6%) GO:0016620 (10.3%)" "glucose metabolic process (15.6%) glycolytic process (15.6%)" "cytoplasm (14%) cytosol (0.4%)" "NAD binding (19.4%) NADP binding (15.6%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (10.3%)" "IPR020828 (17.3%) IPR020831 (17.3%) IPR020829 (17.2%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17.3%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.3%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.2%)" KAEKIDMEAAGEAPANKGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.1%) "GO:0022627 (32.3%) GO:0005840 (1.5%)" GO:0003735 (33.1%) translation (33.1%) "cytosolic small ribosomal subunit (32.3%) ribosome (1.5%)" structural constituent of ribosome (33.1%) "IPR001865 (25.3%) IPR023591 (25.3%) IPR005706 (24.7%)" "Small ribosomal subunit protein uS2 (25.3%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.3%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (24.7%)" NSSIVLVAESELTGGAMHYAER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0046872 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) metal ion binding (9.1%)" "IPR000023 (16.9%) IPR015912 (16.9%) IPR022953 (16.9%)" "Phosphofructokinase domain (16.9%) Phosphofructokinase, conserved site (16.9%) ATP-dependent 6-phosphofructokinase (16.9%)" AENDKPQYLSDWWHQSVNVVGSYHTR Pseudomonadati Bacteria Pseudomonadati "GO:0006811 (15.8%) GO:0015858 (0.1%) GO:0046718 (0.1%)" "GO:0009279 (26.2%) GO:0046930 (15.8%)" "GO:0005337 (26.1%) GO:0015288 (15.7%) GO:0015471 (0.1%)" "monoatomic ion transport (15.8%) nucleoside transport (0.1%) symbiont entry into host cell (0.1%)" "cell outer membrane (26.2%) pore complex (15.8%)" "nucleoside transmembrane transporter activity (26.1%) porin activity (15.7%) nucleoside-specific channel forming porin activity (0.1%)" "IPR003055 (33.3%) IPR018013 (33.3%) IPR036777 (33.3%)" "Nucleoside-specific channel-forming protein Tsx (33.3%) Nucleoside-specific channel-forming protein, Tsx-like (33.3%) Nucleoside-specific channel-forming protein, Tsx-like superfamily (33.3%)" LKEFLTNELEGIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (14.6%) GO:0030148 (14.6%)" "GO:0005829 (14.6%) GO:0016020 (14.6%)" "GO:0008890 (14.6%) GO:0030170 (14.6%) GO:0016874 (8.3%)" "L-threonine catabolic process to glycine (14.6%) sphingolipid biosynthetic process (14.6%)" "cytosol (14.6%) membrane (14.6%)" "glycine C-acetyltransferase activity (14.6%) pyridoxal phosphate binding (14.6%) ligase activity (8.3%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" GSEQINYNAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (24.3%) IPR003714 (24.3%) IPR027417 (24.3%)" "PIN domain (24.3%) PhoH-like protein (24.3%) P-loop containing nucleoside triphosphate hydrolase (24.3%)" YAGIGDVIVASVKDAIPGGSVK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000218 (25%) IPR005745 (25%) IPR019972 (25%)" "Large ribosomal subunit protein uL14 (25%) Large ribosomal subunit protein uL14, bacteria (25%) Large ribosomal subunit protein uL14, conserved site (25%)" LDAQNIHILGTSAQSIDNAEDRDKFSAMLDR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (13.2%) GO:0006526 (13.2%) GO:0006541 (13.2%)" GO:0005737 (13.2%) "GO:0004088 (13.2%) GO:0005524 (13.2%) GO:0046872 (13.2%)" "pyrimidine nucleotide biosynthetic process (13.2%) L-arginine biosynthetic process (13.2%) glutamine metabolic process (13.2%)" cytoplasm (13.2%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.2%) ATP binding (13.2%) metal ion binding (13.2%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" VKHPSEIVNVGDEITVK root "GO:0006412 (24.7%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.4%) GO:0005840 (0.8%) GO:1990904 (0.3%)" "GO:0003735 (24.7%) GO:0003729 (24.6%) GO:0016491 (0.1%)" "translation (24.7%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.4%) ribosome (0.8%) ribonucleoprotein complex (0.3%)" "structural constituent of ribosome (24.7%) mRNA binding (24.6%) oxidoreductase activity (0.1%)" "IPR003029 (20.2%) IPR012340 (20.2%) IPR050437 (20.2%)" "S1 domain (20.2%) Nucleic acid-binding, OB-fold (20.2%) Small ribosomal subunit protein bS1-like (20.2%)" FMGETYDQVQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005737 (16.3%) GO:0070013 (2.3%)" "GO:0005524 (27.3%) GO:0140662 (27.3%) GO:0051082 (26.7%)" "cytoplasm (16.3%) intracellular organelle lumen (2.3%)" "ATP binding (27.3%) ATP-dependent protein folding chaperone (27.3%) unfolded protein binding (26.7%)" "IPR013126 (16.8%) IPR018181 (16.8%) IPR029047 (16.8%)" "Heat shock protein 70 family (16.8%) Heat shock protein 70, conserved site (16.8%) Heat shock protein 70kD, peptide-binding domain superfamily (16.8%)" SITDNSDGINQNSR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016020 (100%) membrane (100%) "IPR019852 (50%) IPR055087 (50%)" "Gliding motility-associated protein, GldL (50%) Gliding motility protein GldL-like, N-terminal domain (50%)" AFGGIKDNLVALFINSGTADCESLQGIYGPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) ATVEAPLKFIYGTGMMLPAFEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0042026 (33.3%) GO:0005737 (33.3%) GO:0003755 (33.3%) protein refolding (33.3%) cytoplasm (33.3%) peptidyl-prolyl cis-trans isomerase activity (33.3%) "IPR001179 (46.2%) IPR046357 (46.2%) IPR048261 (7.7%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (46.2%) Peptidyl-prolyl cis-trans isomerase domain superfamily (46.2%) PPIase chaperone SlpA/SlyD-like, insertion domain superfamily (7.7%)" LGAGGLVQVIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.87 (100%) L-threonylcarbamoyladenylate synthase (100%) "GO:0006450 (14.3%) GO:0008033 (14.3%)" GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0003725 (14.3%) GO:0016779 (14.3%)" "regulation of translational fidelity (14.3%) tRNA processing (14.3%)" cytoplasm (14.3%) "tRNA binding (14.3%) double-stranded RNA binding (14.3%) nucleotidyltransferase activity (14.3%)" "IPR006070 (33.3%) IPR017945 (33.3%) IPR050156 (33.3%)" "Threonylcarbamoyl-AMP synthase-like domain (33.3%) DHBP synthase RibB-like alpha/beta domain superfamily (33.3%) Threonylcarbamoyl-AMP synthase, SUA5 (33.3%)" FLRPLGEIVVMAPDAPR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.1.3.5 (95.5%) 3.1.3.6 (4.5%)" "5'-nucleotidase (95.5%) 3'-nucleotidase (4.5%)" GO:0005737 (16.4%) "GO:0000166 (16.7%) GO:0004309 (16.7%) GO:0008253 (16.7%)" cytoplasm (16.4%) "nucleotide binding (16.7%) exopolyphosphatase activity (16.7%) 5'-nucleotidase activity (16.7%)" "IPR002828 (33.3%) IPR030048 (33.3%) IPR036523 (33.3%)" "Survival protein SurE-like phosphatase/nucleotidase (33.3%) Survival protein SurE (33.3%) SurE-like phosphatase/nucleotidase superfamily (33.3%)" KVEMADPMVAQR root 4.2.-.- (100%) Carbon-oxygen lyases (100%) "GO:0006412 (23.6%) GO:0006879 (0.3%) GO:0010165 (0.3%)" "GO:0005737 (21.3%) GO:0005829 (0.3%) GO:0005886 (0.3%)" "GO:0002161 (24.4%) GO:0016829 (23.9%) GO:0004812 (3.1%)" "translation (23.6%) intracellular iron ion homeostasis (0.3%) response to X-ray (0.3%)" "cytoplasm (21.3%) cytosol (0.3%) plasma membrane (0.3%)" "aminoacyl-tRNA deacylase activity (24.4%) lyase activity (23.9%) aminoacyl-tRNA ligase activity (3.1%)" "IPR007214 (32.1%) IPR036754 (32.1%) IPR004369 (31.5%)" "YbaK/aminoacyl-tRNA synthetase-associated domain (32.1%) YbaK/aminoacyl-tRNA synthetase-associated domain superfamily (32.1%) Prolyl-tRNA editing protein, YbaK/EbsC (31.5%)" SEDGAIATVSEDGMVAGK Parabacteroides merdae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides merdae "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" VALENAASIAGMFLTTECVIAEKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17%) GO:0005737 (16.3%) "GO:0005524 (17%) GO:0140662 (17%) GO:0016853 (16.3%)" protein refolding (17%) cytoplasm (16.3%) "ATP binding (17%) ATP-dependent protein folding chaperone (17%) isomerase activity (16.3%)" "IPR001844 (17.3%) IPR002423 (17.3%) IPR027413 (17.3%)" "Chaperonin Cpn60/GroEL (17.3%) Chaperonin Cpn60/GroEL/TCP-1 family (17.3%) GroEL-like equatorial domain superfamily (17.3%)" YDYQEVMCPPIGNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.5%) GO:0005737 (16.5%) "GO:0000049 (16.5%) GO:0004829 (16.5%) GO:0005524 (16.5%)" threonyl-tRNA aminoacylation (16.5%) cytoplasm (16.5%) "tRNA binding (16.5%) threonine-tRNA ligase activity (16.5%) ATP binding (16.5%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004154 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) Anticodon-binding (7.7%)" TNAYSLDDICDEWSR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (47.1%) IPR012944 (47.1%) IPR033985 (5.9%)" "Tetratricopeptide-like helical domain superfamily (47.1%) RagB/SusD domain (47.1%) SusD-like, N-terminal (5.9%)" CCTESLVNR Metazoa Eukaryota Metazoa "GO:0051902 (2.7%) GO:0072732 (2.7%) GO:0031667 (0.4%)" "GO:0072562 (10.5%) GO:0005737 (8.7%) GO:0005615 (4.4%)" "GO:0046872 (15.2%) GO:0008289 (12.5%) GO:1903981 (11%)" "negative regulation of mitochondrial depolarization (2.7%) cellular response to calcium ion starvation (2.7%) response to nutrient levels (0.4%)" "blood microparticle (10.5%) cytoplasm (8.7%) extracellular space (4.4%)" "metal ion binding (15.2%) lipid binding (12.5%) enterobactin binding (11%)" "IPR000264 (21.4%) IPR014760 (21.4%) IPR020858 (21.4%)" "ALB/AFP/VDB (21.4%) Serum albumin, N-terminal (21.4%) Serum albumin-like (21.4%)" SPVDFSNEALQAAEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.16 (100%) cysteine--tRNA ligase (100%) GO:0006423 (20%) GO:0005829 (20%) "GO:0004817 (20%) GO:0005524 (20%) GO:0008270 (20%)" cysteinyl-tRNA aminoacylation (20%) cytosol (20%) "cysteine-tRNA ligase activity (20%) ATP binding (20%) zinc ion binding (20%)" "IPR009080 (14.3%) IPR014729 (14.3%) IPR015273 (14.3%)" "Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (14.3%) Rossmann-like alpha/beta/alpha sandwich fold (14.3%) Cysteinyl-tRNA synthetase, class Ia, DALR (14.3%)" GLPASPGAATGQIVFFADDAAEWHAAGKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0016301 (25.1%) GO:0050242 (25.1%) GO:0005524 (24.8%)" "kinase activity (25.1%) pyruvate, phosphate dikinase activity (25.1%) ATP binding (24.8%)" "IPR010121 (10.1%) IPR000121 (10%) IPR002192 (10%)" "Pyruvate, phosphate dikinase (10.1%) PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%)" DALLENVTVDADGK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.2%) GO:0005829 (17.2%) "GO:0004612 (17.2%) GO:0005524 (17.2%) GO:0046872 (17.2%)" gluconeogenesis (17.2%) cytosol (17.2%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.2%) ATP binding (17.2%) metal ion binding (17.2%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" SLEELDYNSIQVSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (14.3%) GO:0006508 (14.3%)" GO:0000428 (14.3%) "GO:0003677 (14.3%) GO:0003899 (14.3%) GO:0004190 (14.3%)" "DNA-templated transcription (14.3%) proteolysis (14.3%)" DNA-directed RNA polymerase complex (14.3%) "DNA binding (14.3%) DNA-directed RNA polymerase activity (14.3%) aspartic-type endopeptidase activity (14.3%)" "IPR001969 (7.1%) IPR007120 (7.1%) IPR007121 (7.1%)" "Aspartic peptidase, active site (7.1%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.1%) RNA polymerase, beta subunit, conserved site (7.1%)" NYPPGQHGNSR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0042274 (19.9%) GO:0006412 (19.8%)" "GO:0015935 (19.8%) GO:0005840 (0.2%) GO:1990904 (0.1%)" "GO:0019843 (20.2%) GO:0003735 (19.9%)" "ribosomal small subunit biogenesis (19.9%) translation (19.8%)" "small ribosomal subunit (19.8%) ribosome (0.2%) ribonucleoprotein complex (0.1%)" "rRNA binding (20.2%) structural constituent of ribosome (19.9%)" "IPR001912 (16.9%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.9%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" GIYKLETIEGSK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "1.2.4.1 (99.9%) 2.3.1.12 (0.1%)" "pyruvate dehydrogenase (acetyl-transferring) (99.9%) dihydrolipoyllysine-residue acetyltransferase (0.1%)" "GO:0006086 (0.1%) GO:0042867 (0.1%)" "GO:0045254 (0.1%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0000287 (48.4%) GO:0004739 (42.3%) GO:0016491 (8.3%)" "pyruvate decarboxylation to acetyl-CoA (0.1%) pyruvate catabolic process (0.1%)" "pyruvate dehydrogenase complex (0.1%) cytosol (0.1%) membrane (0.1%)" "magnesium ion binding (48.4%) pyruvate dehydrogenase (acetyl-transferring) activity (42.3%) oxidoreductase activity (8.3%)" "IPR009014 (12.8%) IPR051157 (12.8%) IPR055152 (12.7%)" "Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.8%) Pyruvate Dehydrogenase/Transketolase (12.8%) Transketolase-like, C-terminal domain (12.7%)" ADGAMDAGNMLKPALAR root 3.6.1.15 (100%) nucleoside-triphosphate phosphatase (100%) "GO:0034605 (16.9%) GO:0042026 (16%) GO:0006508 (1.2%)" "GO:0005829 (13.9%) GO:0005737 (3%) GO:0005759 (0%)" "GO:0005524 (16.9%) GO:0016887 (16.9%) GO:0042802 (13.9%)" "cellular response to heat (16.9%) protein refolding (16%) proteolysis (1.2%)" "cytosol (13.9%) cytoplasm (3%) mitochondrial matrix (0%)" "ATP binding (16.9%) ATP hydrolysis activity (16.9%) identical protein binding (13.9%)" "IPR018368 (8.5%) IPR050130 (8.5%) IPR027417 (8.5%)" "ClpA/B, conserved site 1 (8.5%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.5%) P-loop containing nucleoside triphosphate hydrolase (8.5%)" TVVPYTSEIYGR root 3.5.2.3 (100%) dihydroorotase (100%) "GO:0006207 (19.9%) GO:0044205 (19.7%) GO:0006221 (0.2%)" "GO:0005829 (19.9%) GO:0005737 (0.1%) GO:0005886 (0%)" "GO:0004151 (19.9%) GO:0008270 (19.3%) GO:0046872 (0.6%)" "'de novo' pyrimidine nucleobase biosynthetic process (19.9%) 'de novo' UMP biosynthetic process (19.7%) pyrimidine nucleotide biosynthetic process (0.2%)" "cytosol (19.9%) cytoplasm (0.1%) plasma membrane (0%)" "dihydroorotase activity (19.9%) zinc ion binding (19.3%) metal ion binding (0.6%)" "IPR002195 (25.1%) IPR004721 (25.1%) IPR032466 (25%)" "Dihydroorotase, conserved site (25.1%) Dihydroorotase homodimeric type (25.1%) Metal-dependent hydrolase (25%)" NVKPGDEVEVFIYHDNEGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0003676 (100%) nucleic acid binding (100%) "IPR003029 (16.7%) IPR012340 (16.7%) IPR014464 (16.7%)" "S1 domain (16.7%) Nucleic acid-binding, OB-fold (16.7%) Conserved virulence factor B (16.7%)" NKDEDEESLQALGK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium IPR025242 (100%) Protein of unknown function DUF4193 (100%) EALAEQFAPQSDFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" TGAVTPVANLDPVQLSGTVVKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.5.1.2 (100%) DNA ligase (NAD(+)) (100%) "GO:0006260 (16.8%) GO:0006281 (16.8%)" GO:0005829 (16.1%) "GO:0003911 (16.8%) GO:0046872 (16.8%) GO:0003677 (16.6%)" "DNA replication (16.8%) DNA repair (16.8%)" cytosol (16.1%) "DNA ligase (NAD+) activity (16.8%) metal ion binding (16.8%) DNA binding (16.6%)" "IPR004149 (8.4%) IPR004150 (8.4%) IPR010994 (8.4%)" "Zinc-finger, NAD-dependent DNA ligase C4-type (8.4%) NAD-dependent DNA ligase, OB-fold (8.4%) RuvA domain 2-like (8.4%)" AKFEALAHNLIQACLEPCKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005524 (33.3%) GO:0051082 (33.3%) GO:0140662 (33.3%)" "ATP binding (33.3%) unfolded protein binding (33.3%) ATP-dependent protein folding chaperone (33.3%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" FTMEELAQFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.2.1.1 (100%) transketolase (100%) GO:0006098 (24.8%) GO:0005829 (24.8%) "GO:0004802 (24.8%) GO:0046872 (24.8%) GO:0047896 (1%)" pentose-phosphate shunt (24.8%) cytosol (24.8%) "transketolase activity (24.8%) metal ion binding (24.8%) formaldehyde transketolase activity (1%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" KGPIFANFVLADEINRAPAKVQSALLEAMQER Bacteria Bacteria 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) GO:0006355 (0.3%) "GO:0005524 (49.8%) GO:0016887 (49.8%)" regulation of DNA-templated transcription (0.3%) "ATP binding (49.8%) ATP hydrolysis activity (49.8%)" "IPR011703 (25%) IPR027417 (25%) IPR050764 (25%)" "ATPase, AAA-3 (25%) P-loop containing nucleoside triphosphate hydrolase (25%) CbbQ/NirQ/NorQ/GpvN (25%)" LLTLGIKPNRPETGYGYIQIAEQEGDNFYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.13 (100%) mannose-1-phosphate guanylyltransferase (100%) GO:0009298 (30.8%) "GO:0004475 (30.8%) GO:0005525 (30.8%) GO:0008928 (3.8%)" GDP-mannose biosynthetic process (30.8%) "mannose-1-phosphate guanylyltransferase (GTP) activity (30.8%) GTP binding (30.8%) mannose-1-phosphate guanylyltransferase (GDP) activity (3.8%)" "IPR005835 (25%) IPR029044 (25%) IPR049577 (25%)" "Nucleotidyl transferase domain (25%) Nucleotide-diphospho-sugar transferases (25%) GDP-mannose pyrophosphorylase, N-terminal domain (25%)" ILDMAANTEYLDKVAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (25%) GO:0005829 (25%) "GO:0004830 (25%) GO:0005524 (25%)" tryptophanyl-tRNA aminoacylation (25%) cytosol (25%) "tryptophan-tRNA ligase activity (25%) ATP binding (25%)" "IPR002305 (17.6%) IPR002306 (17.6%) IPR014729 (17.6%)" "Aminoacyl-tRNA synthetase, class Ic (17.6%) Tryptophan-tRNA ligase (17.6%) Rossmann-like alpha/beta/alpha sandwich fold (17.6%)" LKFEAPNFDLFLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.17.4.2 (100%) ribonucleoside-triphosphate reductase (thioredoxin) (100%) "GO:0006260 (16.4%) GO:0009265 (16.4%)" GO:0031250 (16.4%) "GO:0004748 (16.4%) GO:0005524 (16.4%) GO:0008998 (16.4%)" "DNA replication (16.4%) 2'-deoxyribonucleotide biosynthetic process (16.4%)" anaerobic ribonucleoside-triphosphate reductase complex (16.4%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.4%) ATP binding (16.4%) ribonucleoside-triphosphate reductase (thioredoxin) activity (16.4%)" "IPR005144 (50%) IPR012833 (50%)" "ATP-cone domain (50%) Ribonucleoside-triphosphate reductase, anaerobic (50%)" SALFVIDVLKENIAVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (32.6%) "GO:0022627 (32.6%) GO:0005840 (2.2%)" GO:0003735 (32.6%) translation (32.6%) "cytosolic small ribosomal subunit (32.6%) ribosome (2.2%)" structural constituent of ribosome (32.6%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" LKTNHDGTGVVVDPAAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.3%) IPR004499 (11.3%) IPR006195 (11.3%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.3%) Proline-tRNA ligase, class IIa, archaeal-type (11.3%) Aminoacyl-tRNA synthetase, class II (11.3%)" HVMSIADHVVQESR root 2.7.7.7 (100%) DNA-directed DNA polymerase (100%) "GO:0017148 (20.2%) GO:0090071 (20.2%) GO:0042256 (19%)" "GO:0005737 (19.2%) GO:0016020 (0.2%) GO:0005829 (0.1%)" "GO:0043023 (20.2%) GO:0000309 (0.1%) GO:0003677 (0.1%)" "negative regulation of translation (20.2%) negative regulation of ribosome biogenesis (20.2%) cytosolic ribosome assembly (19%)" "cytoplasm (19.2%) membrane (0.2%) cytosol (0.1%)" "ribosomal large subunit binding (20.2%) nicotinamide-nucleotide adenylyltransferase activity (0.1%) DNA binding (0.1%)" "IPR004394 (48.4%) IPR043519 (48.4%) IPR001345 (0.3%)" "Protein Iojap/ribosomal silencing factor RsfS (48.4%) Nucleotidyltransferase superfamily (48.4%) Phosphoglycerate/bisphosphoglycerate mutase, active site (0.3%)" LIVGLANPGAEYAATR root 3.1.1.29 (100%) peptidyl-tRNA hydrolase (100%) "GO:0006515 (19.7%) GO:0072344 (19.7%)" GO:0005737 (19.7%) "GO:0004045 (20.4%) GO:0000049 (20.2%) GO:0016787 (0.4%)" "protein quality control for misfolded or incompletely synthesized proteins (19.7%) rescue of stalled ribosome (19.7%)" cytoplasm (19.7%) "peptidyl-tRNA hydrolase activity (20.4%) tRNA binding (20.2%) hydrolase activity (0.4%)" "IPR001328 (33.3%) IPR018171 (33.3%) IPR036416 (33.3%)" "Peptidyl-tRNA hydrolase (33.3%) Peptidyl-tRNA hydrolase, conserved site (33.3%) Peptidyl-tRNA hydrolase superfamily (33.3%)" FVGHGIGIQINELPVLTPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.-.- (100%) Acting on peptide bonds (peptidases) (100%) "GO:0004177 (70%) GO:0016787 (30%)" "aminopeptidase activity (70%) hydrolase activity (30%)" "IPR000587 (20%) IPR000994 (20%) IPR029149 (20%)" "Creatinase, N-terminal (20%) Peptidase M24 (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" YYEGIVSYQK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR024620 (40.4%) IPR053968 (40.4%) IPR008969 (19.1%)" "Domain of unknown function DUF3869 (40.4%) BF9343_1606-like, C-terminal (40.4%) Carboxypeptidase-like, regulatory domain superfamily (19.1%)" AYYHETVEILEEKVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" GSHDFQMTEDANGER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.1.1.23 (100%) orotidine-5'-phosphate decarboxylase (100%) "GO:0006207 (33.3%) GO:0044205 (33.3%)" GO:0004590 (33.3%) "'de novo' pyrimidine nucleobase biosynthetic process (33.3%) 'de novo' UMP biosynthetic process (33.3%)" orotidine-5'-phosphate decarboxylase activity (33.3%) "IPR001754 (25%) IPR011060 (25%) IPR011995 (25%)" "Orotidine 5'-phosphate decarboxylase domain (25%) Ribulose-phosphate binding barrel (25%) Orotidine 5'-phosphate decarboxylase, type 2 (25%)" QITENTEEVIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (25%) GO:0005737 (25%) "GO:0004828 (25%) GO:0005524 (25%)" seryl-tRNA aminoacylation (25%) cytoplasm (25%) "serine-tRNA ligase activity (25%) ATP binding (25%)" "IPR002314 (14.3%) IPR002317 (14.3%) IPR006195 (14.3%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (14.3%) Serine-tRNA ligase, type1 (14.3%) Aminoacyl-tRNA synthetase, class II (14.3%)" SKSPALDSCPQR root "GO:0006412 (20.1%) GO:0032790 (0%)" "GO:0015935 (20.1%) GO:0005840 (0.1%) GO:1990904 (0%)" "GO:0003735 (20.1%) GO:0019843 (20.1%) GO:0000049 (19.4%)" "translation (20.1%) ribosome disassembly (0%)" "small ribosomal subunit (20.1%) ribosome (0.1%) ribonucleoprotein complex (0%)" "structural constituent of ribosome (20.1%) rRNA binding (20.1%) tRNA binding (19.4%)" "IPR006032 (33.2%) IPR012340 (33.2%) IPR005679 (33.1%)" "Small ribosomal subunit protein uS12 (33.2%) Nucleic acid-binding, OB-fold (33.2%) Ribosomal protein uS12, bacteria (33.1%)" VVNVGDVVEVMVLDIDEERRR root "GO:0006412 (24.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.6%) GO:0005840 (0.5%) GO:1990904 (0.1%)" "GO:0003735 (24.8%) GO:0003729 (24.8%) GO:0016491 (0.1%)" "translation (24.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.6%) ribosome (0.5%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.8%) mRNA binding (24.8%) oxidoreductase activity (0.1%)" "IPR003029 (20.2%) IPR012340 (20.2%) IPR050437 (20.2%)" "S1 domain (20.2%) Nucleic acid-binding, OB-fold (20.2%) Small ribosomal subunit protein bS1-like (20.2%)" EVANVNDAENK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" LMNVVGDSIDGMKELNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "7.1.2.2 (94.7%) 3.6.3.14 (5.3%)" "H(+)-transporting two-sector ATPase (94.7%) Transferred entry: 7.1.2.2 (5.3%)" "GO:0005886 (21.4%) GO:0045259 (21.4%)" "GO:0005524 (21.4%) GO:0046933 (21.4%) GO:0016787 (11.9%)" "plasma membrane (21.4%) proton-transporting ATP synthase complex (21.4%)" "ATP binding (21.4%) proton-transporting ATP synthase activity, rotational mechanism (21.4%) hydrolase activity (11.9%)" "IPR000194 (10%) IPR003593 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" DKLNIAGVGIGGMGNANLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (93.3%) GO:0050112 (6.7%)" "nucleotide binding (93.3%) inositol 2-dehydrogenase (NAD+) activity (6.7%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" SLMQLAEDMGMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (18.7%) GO:0009098 (18.7%) GO:0009099 (18.7%)" "GO:0004084 (14.7%) GO:0052654 (7.5%) GO:0052655 (7.5%)" "isoleucine biosynthetic process (18.7%) L-leucine biosynthetic process (18.7%) L-valine biosynthetic process (18.7%)" "branched-chain-amino-acid transaminase activity (14.7%) L-leucine-2-oxoglutarate transaminase activity (7.5%) L-valine-2-oxoglutarate transaminase activity (7.5%)" "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" FITHCPECGSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.5.1.2 (100%) DNA ligase (NAD(+)) (100%) "GO:0006260 (16.7%) GO:0006281 (16.7%)" GO:0005829 (16.4%) "GO:0003677 (16.7%) GO:0003911 (16.7%) GO:0046872 (16.7%)" "DNA replication (16.7%) DNA repair (16.7%)" cytosol (16.4%) "DNA binding (16.7%) DNA ligase (NAD+) activity (16.7%) metal ion binding (16.7%)" "IPR003583 (8.4%) IPR004149 (8.4%) IPR010994 (8.4%)" "Helix-hairpin-helix DNA-binding motif, class 1 (8.4%) Zinc-finger, NAD-dependent DNA ligase C4-type (8.4%) RuvA domain 2-like (8.4%)" EASMADICAAMKEASEGELKGVLGYTEDAVVSTDFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0016620 (12.5%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (12.5%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" LLVNTGSLAESTQQSGYSHAIPR root "3.4.24.- (76.5%) 3.4.-.- (17.6%) 3.4.24.64 (5.9%)" "Metalloendopeptidases (76.5%) Acting on peptide bonds (peptidases) (17.6%) mitochondrial processing peptidase (5.9%)" "GO:0006508 (32.8%) GO:0042542 (0.2%)" GO:0042597 (0.2%) "GO:0046872 (33.7%) GO:0008237 (30.8%) GO:0008233 (1.7%)" "proteolysis (32.8%) response to hydrogen peroxide (0.2%)" periplasmic space (0.2%) "metal ion binding (33.7%) metallopeptidase activity (30.8%) peptidase activity (1.7%)" "IPR011249 (26%) IPR011765 (25.1%) IPR007863 (24.6%)" "Metalloenzyme, LuxS/M16 peptidase-like (26%) Peptidase M16, N-terminal (25.1%) Peptidase M16, C-terminal (24.6%)" QYTEAEQAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR041662 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like 2 (50%)" GKYKPDFTPHADCGDNVIIINADKVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0006412 (20%) GO:0017148 (20%)" GO:0022625 (20%) "GO:0003729 (20%) GO:0003735 (20%)" "translation (20%) negative regulation of translation (20%)" cytosolic large ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%)" "IPR005822 (25%) IPR005823 (25%) IPR023563 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13, conserved site (25%)" GVAAFVPEWNAENCIQCNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (72.4%) 1.2.7.- (24.1%) 1.2.1.51 (3.4%)" "pyruvate synthase (72.4%) With an iron-sulfur protein as acceptor (24.1%) pyruvate dehydrogenase (NADP(+)) (3.4%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (11.5%)" "GO:0005506 (14.7%) GO:0030976 (14.7%) GO:0051539 (14.7%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (11.5%)" "iron ion binding (14.7%) thiamine pyrophosphate binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" TDMCALANPLEPASHYDTSQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" TVLLGETGTTSLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0019867 (50%) GO:2001070 (50%) outer membrane (50%) starch binding (50%) "IPR025970 (50%) IPR032187 (50%)" "SusE outer membrane protein (50%) Outer membrane protein SusF/SusE-like, C-terminal (50%)" ILTEPNASITVQYK Pseudomonadati Bacteria Pseudomonadati "3.4.25.2 (54.5%) 3.4.21.- (27.3%) 3.6.1.15 (9.1%)" "HslU--HslV peptidase (54.5%) Serine endopeptidases (27.3%) nucleoside-triphosphate phosphatase (9.1%)" "GO:0051603 (14.6%) GO:0043335 (13.1%) GO:0006508 (0.2%)" "GO:0009376 (14.6%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0005524 (14.7%) GO:0008233 (14.6%) GO:0016887 (14.6%)" "proteolysis involved in protein catabolic process (14.6%) protein unfolding (13.1%) proteolysis (0.2%)" "HslUV protease complex (14.6%) cytosol (0.1%) membrane (0.1%)" "ATP binding (14.7%) peptidase activity (14.6%) ATP hydrolysis activity (14.6%)" "IPR027417 (17%) IPR050052 (17%) IPR019489 (16.9%)" "P-loop containing nucleoside triphosphate hydrolase (17%) ATP-dependent Clp protease ATP-binding subunit ClpX (17%) Clp ATPase, C-terminal (16.9%)" SEFAENDAYVHATPLIR Bacteria Bacteria "2.3.1.12 (98.8%) 2.3.1.- (1.2%)" "dihydrolipoyllysine-residue acetyltransferase (98.8%) Transferring groups other than amino-acyl groups (1.2%)" "GO:0006086 (20.1%) GO:0006090 (0%) GO:0042867 (0%)" "GO:0005737 (20.1%) GO:0045254 (19.4%)" "GO:0031405 (20.1%) GO:0004742 (19.9%) GO:0016746 (0.2%)" "pyruvate decarboxylation to acetyl-CoA (20.1%) pyruvate metabolic process (0%) pyruvate catabolic process (0%)" "cytoplasm (20.1%) pyruvate dehydrogenase complex (19.4%)" "lipoic acid binding (20.1%) dihydrolipoyllysine-residue acetyltransferase activity (19.9%) acyltransferase activity (0.2%)" "IPR050743 (11.3%) IPR004167 (11.3%) IPR036625 (11.3%)" "2-oxoacid dehydrogenase family, E2 component (11.3%) Peripheral subunit-binding domain (11.3%) E3-binding domain superfamily (11.3%)" NEDFVALTQAILDAAVANK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" INLIGEHTDYNGGFVFPGAIDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (19.7%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (19.7%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" NYFGGHNFQDGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003677 (100%) DNA binding (100%) SKPHINIGTIGHVDHGK root "3.6.5.3 (99.9%) 2.7.7.6 (0.1%)" "protein-synthesizing GTPase (99.9%) DNA-directed RNA polymerase (0.1%)" "GO:0070125 (1.8%) GO:0006351 (0%) GO:0006633 (0%)" "GO:0005829 (12.9%) GO:0032045 (12.2%) GO:0005739 (1.8%)" "GO:0003746 (15.1%) GO:0003924 (15.1%) GO:0005525 (15.1%)" "mitochondrial translational elongation (1.8%) DNA-templated transcription (0%) fatty acid biosynthetic process (0%)" "cytosol (12.9%) guanyl-nucleotide exchange factor complex (12.2%) mitochondrion (1.8%)" "translation elongation factor activity (15.1%) GTPase activity (15.1%) GTP binding (15.1%)" "IPR000795 (8.5%) IPR027417 (8.4%) IPR050055 (8.4%)" "Translational (tr)-type GTP-binding domain (8.5%) P-loop containing nucleoside triphosphate hydrolase (8.4%) Elongation factor Tu GTPase (8.4%)" AQTDEVLENPDPR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "5.4.99.18 (94.4%) 4.1.1.21 (5.2%) 6.3.4.18 (0.4%)" "5-(carboxyamino)imidazole ribonucleotide mutase (94.4%) phosphoribosylaminoimidazole carboxylase (5.2%) 5-(carboxyamino)imidazole ribonucleotide synthase (0.4%)" GO:0006189 (35.6%) GO:0005829 (0.3%) "GO:0034023 (34.5%) GO:0016829 (26.9%) GO:0016853 (1%)" 'de novo' IMP biosynthetic process (35.6%) cytosol (0.3%) "5-(carboxyamino)imidazole ribonucleotide mutase activity (34.5%) lyase activity (26.9%) isomerase activity (1%)" "IPR000031 (33.5%) IPR024694 (33%) IPR033747 (32.4%)" "PurE domain (33.5%) PurE, prokaryotic type (33%) Class I PurE (32.4%)" RKLIGDDEHGWDDEGVFNYEGGCYAK Pseudomonadati Bacteria Pseudomonadati 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.4%) GO:0005829 (17.4%) "GO:0004612 (17.4%) GO:0005524 (17.4%) GO:0046872 (17%)" gluconeogenesis (17.4%) cytosol (17.4%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.4%) ATP binding (17.4%) metal ion binding (17%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" ADFVSLNAPYTPDTYHILGEEEFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "1.1.1.- (66.7%) 1.1.1.26 (33.3%)" "With NAD(+) or NADP(+) as acceptor (66.7%) glyoxylate reductase (33.3%)" GO:0008652 (33.3%) "GO:0016616 (33.3%) GO:0051287 (33.3%)" amino acid biosynthetic process (33.3%) "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (33.3%) NAD binding (33.3%)" "IPR006139 (16.7%) IPR006140 (16.7%) IPR029752 (16.7%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (16.7%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (16.7%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 (16.7%)" EAGVPVVPGTEKPVTDIEDAKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "6.3.4.14 (70%) 6.4.1.7 (30%)" "biotin carboxylase (70%) 2-oxoglutarate carboxylase (30%)" GO:2001295 (17.8%) "GO:0005524 (22.2%) GO:0046872 (22.2%) GO:0003989 (15.6%)" malonyl-CoA biosynthetic process (17.8%) "ATP binding (22.2%) metal ion binding (22.2%) acetyl-CoA carboxylase activity (15.6%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" ACIGIITNPVNTTVAIAAEVLK Bacteria Bacteria "1.1.1.37 (99.8%) 1.-.-.- (0.1%) 1.1.1.- (0.1%)" "malate dehydrogenase (99.8%) Oxidoreductases (0.1%) With NAD(+) or NADP(+) as acceptor (0.1%)" "GO:0006099 (25.1%) GO:0006108 (23.7%) GO:0019752 (0.8%)" "GO:0005737 (25.1%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0030060 (25.1%) GO:0016491 (0.1%) GO:0016615 (0%)" "tricarboxylic acid cycle (25.1%) malate metabolic process (23.7%) carboxylic acid metabolic process (0.8%)" "cytoplasm (25.1%) cytosol (0%) membrane (0%)" "L-malate dehydrogenase (NAD+) activity (25.1%) oxidoreductase activity (0.1%) malate dehydrogenase activity (0%)" "IPR036291 (15.9%) IPR001236 (15.7%) IPR022383 (15.7%)" "NAD(P)-binding domain superfamily (15.9%) Lactate/malate dehydrogenase, N-terminal (15.7%) Lactate/malate dehydrogenase, C-terminal (15.7%)" LAESSFAFSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "6.3.5.5 (91.3%) 6.3.4.16 (8.7%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (91.3%) carbamoyl-phosphate synthase (ammonia) (8.7%)" "GO:0006541 (14.7%) GO:0006221 (9.8%) GO:0006526 (9.8%)" GO:0005737 (14.7%) "GO:0004088 (14.7%) GO:0005524 (14.7%) GO:0046872 (14.7%)" "glutamine metabolic process (14.7%) pyrimidine nucleotide biosynthetic process (9.8%) L-arginine biosynthetic process (9.8%)" cytoplasm (14.7%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14.7%) ATP binding (14.7%) metal ion binding (14.7%)" "IPR005479 (10.1%) IPR005483 (10.1%) IPR011761 (10.1%)" "Carbamoyl phosphate synthase, ATP-binding domain (10.1%) Carbamoyl phosphate synthase, CPSase domain (10.1%) ATP-grasp fold (10.1%)" NQFQYSSTMQIPVLKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (17%) "GO:0005840 (17%) GO:1990904 (17%)" "GO:0003735 (17%) GO:0000049 (15.9%) GO:0019843 (15.9%)" translation (17%) "ribosome (17%) ribonucleoprotein complex (17%)" "structural constituent of ribosome (17%) tRNA binding (15.9%) rRNA binding (15.9%)" "IPR002132 (20%) IPR020930 (20%) IPR022803 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5, bacteria (20%) Large ribosomal subunit protein uL5 domain superfamily (20%)" TDALMLSGETAYGKYPLDAVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (11.1%) "GO:0000287 (17.8%) GO:0004743 (17.8%) GO:0005524 (17.8%)" response to stress (11.1%) "magnesium ion binding (17.8%) pyruvate kinase activity (17.8%) ATP binding (17.8%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" YQSVLLDNIAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (50%) GO:0004356 (50%) glutamine biosynthetic process (50%) glutamine synthetase activity (50%) "IPR008146 (14.3%) IPR008147 (14.3%) IPR014746 (14.3%)" "Glutamine synthetase, catalytic domain (14.3%) Glutamine synthetase, N-terminal domain (14.3%) Glutamine synthetase/guanido kinase, catalytic domain (14.3%)" VQGKDEVILTLNK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.6%) GO:0006352 (0%) GO:0006879 (0%)" "GO:0000428 (16.8%) GO:0005737 (16.5%) GO:0000345 (0%)" "GO:0003899 (16.6%) GO:0046983 (16.6%) GO:0003677 (16.3%)" "DNA-templated transcription (16.6%) DNA-templated transcription initiation (0%) intracellular iron ion homeostasis (0%)" "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.5%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA-directed RNA polymerase activity (16.6%) protein dimerization activity (16.6%) DNA binding (16.3%)" "IPR011262 (16.8%) IPR036643 (16.8%) IPR011263 (16.8%)" "DNA-directed RNA polymerase, insert domain (16.8%) DNA-directed RNA polymerase, insert domain superfamily (16.8%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%)" LLDEMHVPFEMNALSAHR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.99.18 (95.5%) 4.1.1.21 (4.5%)" "5-(carboxyamino)imidazole ribonucleotide mutase (95.5%) phosphoribosylaminoimidazole carboxylase (4.5%)" GO:0006189 (39.3%) "GO:0034023 (37.5%) GO:0016829 (19.6%) GO:0004638 (1.8%)" 'de novo' IMP biosynthetic process (39.3%) "5-(carboxyamino)imidazole ribonucleotide mutase activity (37.5%) lyase activity (19.6%) phosphoribosylaminoimidazole carboxylase activity (1.8%)" "IPR000031 (33.3%) IPR024694 (33.3%) IPR033747 (33.3%)" "PurE domain (33.3%) PurE, prokaryotic type (33.3%) Class I PurE (33.3%)" HCEENEIERPEDLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.6.2.4 (94.5%) 3.6.4.12 (4.1%) 3.6.1.- (1.4%)" "DNA 3'-5' helicase (94.5%) DNA helicase (4.1%) In phosphorus-containing anhydrides (1.4%)" "GO:0006260 (8.4%) GO:0006281 (8.4%) GO:0006310 (8.3%)" "GO:0005737 (8.3%) GO:0030894 (8.3%) GO:0043590 (8.3%)" "GO:0043138 (8.4%) GO:0009378 (8.3%) GO:0016787 (8.3%)" "DNA replication (8.4%) DNA repair (8.4%) DNA recombination (8.3%)" "cytoplasm (8.3%) replisome (8.3%) bacterial nucleoid (8.3%)" "3'-5' DNA helicase activity (8.4%) four-way junction helicase activity (8.3%) hydrolase activity (8.3%)" "IPR002121 (7.3%) IPR010997 (7.3%) IPR044876 (7.3%)" "HRDC domain (7.3%) HRDC-like superfamily (7.3%) HRDC domain superfamily (7.3%)" VHEGDDLTNADR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.3%) "GO:0003746 (25.3%) GO:0005525 (25.3%) GO:0003924 (24.1%)" ribosome disassembly (25.3%) "translation elongation factor activity (25.3%) GTP binding (25.3%) GTPase activity (24.1%)" "IPR009000 (8%) IPR027417 (8%) IPR053905 (8%)" "Translation protein, beta-barrel domain superfamily (8%) P-loop containing nucleoside triphosphate hydrolase (8%) Elongation factor G-like, domain II (8%)" YFLSQALGCNANEVEGMVIGGHGDTTMIPLTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (24.7%) GO:0006099 (24.2%) GO:0019752 (0.5%)" GO:0005737 (0.5%) "GO:0030060 (25.3%) GO:0004459 (24.7%)" "lactate metabolic process (24.7%) tricarboxylic acid cycle (24.2%) carboxylic acid metabolic process (0.5%)" cytoplasm (0.5%) "L-malate dehydrogenase (NAD+) activity (25.3%) L-lactate dehydrogenase (NAD+) activity (24.7%)" "IPR001236 (16.8%) IPR011275 (16.8%) IPR022383 (16.8%)" "Lactate/malate dehydrogenase, N-terminal (16.8%) Malate dehydrogenase, type 3 (16.8%) Lactate/malate dehydrogenase, C-terminal (16.8%)" HIVTDIAGTTR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0042254 (31.5%) "GO:0005525 (32%) GO:0043022 (32%) GO:0016787 (4.5%)" ribosome biogenesis (31.5%) "GTP binding (32%) ribosome binding (32%) hydrolase activity (4.5%)" "IPR005225 (14.4%) IPR006073 (14.4%) IPR027417 (14.4%)" "Small GTP-binding domain (14.4%) GTP binding domain (14.4%) P-loop containing nucleoside triphosphate hydrolase (14.4%)" IVNEPTASALAYGLDK root GO:0042026 (0.8%) GO:0005737 (4.6%) "GO:0005524 (30.8%) GO:0140662 (30.8%) GO:0051082 (29.2%)" protein refolding (0.8%) cytoplasm (4.6%) "ATP binding (30.8%) ATP-dependent protein folding chaperone (30.8%) unfolded protein binding (29.2%)" "IPR013126 (16.9%) IPR018181 (16.9%) IPR043129 (16.9%)" "Heat shock protein 70 family (16.9%) Heat shock protein 70, conserved site (16.9%) ATPase, nucleotide binding domain (16.9%)" LKEPLNLPEAMTEREFAEHIAELASK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" TVFFTIGSSELSPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (25%) IPR006665 (25%) IPR036737 (25%)" "Outer membrane protein, bacterial (25%) OmpA-like domain (25%) OmpA-like domain superfamily (25%)" ETPYDNEDRILVPSPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.2.12 (97.6%) 5.4.2.1 (2.4%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (97.6%) Transferred entry: 5.4.2.11 and 5.4.2.12 (2.4%)" "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" HTSYAGQDIISNASCTTNCLAPIAK Pseudomonadati Bacteria Pseudomonadati "1.2.1.- (94.4%) 1.2.1.12 (5.6%)" "With NAD(+) or NADP(+) as acceptor (94.4%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (5.6%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (11.8%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (11.8%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" ETEAGNAGMNLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" IDPIKYDLLFER root 2.7.7.7 (100%) DNA-directed DNA polymerase (100%) "GO:0006260 (24.4%) GO:0016539 (0.2%) GO:0006811 (0%)" "GO:0005737 (10.3%) GO:0016020 (0%)" "GO:0008408 (24.4%) GO:0003887 (23.9%) GO:0003676 (16.4%)" "DNA replication (24.4%) intein-mediated protein splicing (0.2%) monoatomic ion transport (0%)" "cytoplasm (10.3%) membrane (0%)" "3'-5' exonuclease activity (24.4%) DNA-directed DNA polymerase activity (23.9%) nucleic acid binding (16.4%)" "IPR004805 (10.9%) IPR011708 (10.9%) IPR004013 (10.7%)" "Error-prone DNA polymerase/DNA polymerase III subunit alpha DnaE/PolC (10.9%) Bacterial DNA polymerase III, alpha subunit, NTPase domain (10.9%) PHP domain (10.7%)" TGVSNTLENEFKGR Bacteria Bacteria "GO:0050821 (24.8%) GO:0061077 (0.6%) GO:0006457 (0.1%)" "GO:0005829 (24.8%) GO:0042597 (24%) GO:0030288 (0.1%)" "GO:0051082 (24.8%) GO:0003677 (0.6%) GO:0001530 (0.1%)" "protein stabilization (24.8%) obsolete chaperone-mediated protein folding (0.6%) protein folding (0.1%)" "cytosol (24.8%) periplasmic space (24%) outer membrane-bounded periplasmic space (0.1%)" "unfolded protein binding (24.8%) DNA binding (0.6%) lipopolysaccharide binding (0.1%)" "IPR024930 (50.1%) IPR005632 (49.9%)" "Skp domain superfamily (50.1%) Chaperone protein Skp (49.9%)" QSVVDYLISK root "GO:0034220 (22.4%) GO:0006811 (2.4%) GO:0007155 (0.1%)" "GO:0009279 (24.9%) GO:0046930 (24.8%) GO:0019867 (0.1%)" "GO:0015288 (24.8%) GO:0016740 (0.1%) GO:0005509 (0.1%)" "monoatomic ion transmembrane transport (22.4%) monoatomic ion transport (2.4%) cell adhesion (0.1%)" "cell outer membrane (24.9%) pore complex (24.8%) outer membrane (0.1%)" "porin activity (24.8%) transferase activity (0.1%) calcium ion binding (0.1%)" "IPR006665 (12.6%) IPR050330 (12.6%) IPR006664 (12.6%)" "OmpA-like domain (12.6%) Bacterial Outer Membrane Structural/Functional (12.6%) Outer membrane protein, bacterial (12.6%)" LNPSEIRDALTGELFR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.7.7.87 (100%) L-threonylcarbamoyladenylate synthase (100%) "GO:0006450 (14.3%) GO:0002949 (14.1%) GO:0008033 (0.1%)" "GO:0005737 (14.3%) GO:0005829 (0%)" "GO:0003725 (14.3%) GO:0000049 (14.3%) GO:0005524 (14.1%)" "regulation of translational fidelity (14.3%) tRNA threonylcarbamoyladenosine modification (14.1%) tRNA processing (0.1%)" "cytoplasm (14.3%) cytosol (0%)" "double-stranded RNA binding (14.3%) tRNA binding (14.3%) ATP binding (14.1%)" "IPR017945 (25.1%) IPR006070 (25.1%) IPR050156 (25%)" "DHBP synthase RibB-like alpha/beta domain superfamily (25.1%) Threonylcarbamoyl-AMP synthase-like domain (25.1%) Threonylcarbamoyl-AMP synthase, SUA5 (25%)" LNNGESGSITFIGTVSPAGGNLKEPVTENTKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (23.9%) GO:0046034 (0.7%)" "GO:0005524 (24.6%) GO:0046961 (24.6%) GO:0046933 (23.9%)" "proton motive force-driven plasma membrane ATP synthesis (23.9%) ATP metabolic process (0.7%)" "ATP binding (24.6%) proton-transporting ATPase activity, rotational mechanism (24.6%) proton-transporting ATP synthase activity, rotational mechanism (23.9%)" "IPR000194 (12.5%) IPR004100 (12.5%) IPR020003 (12.5%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (12.5%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (12.5%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (12.5%)" SGAEEIEAMMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.2 (90.9%) 5.4.2.- (9.1%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (90.9%) Phosphotransferases (phosphomutases) (9.1%)" "GO:0005975 (24.3%) GO:0006166 (24.3%)" "GO:0008973 (24.3%) GO:0000287 (23.8%) GO:0004614 (3.5%)" "carbohydrate metabolic process (24.3%) purine ribonucleoside salvage (24.3%)" "phosphopentomutase activity (24.3%) magnesium ion binding (23.8%) phosphoglucomutase activity (3.5%)" "IPR005846 (12.9%) IPR016055 (12.9%) IPR036900 (12.9%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (12.9%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (12.9%) Alpha-D-phosphohexomutase, C-terminal domain superfamily (12.9%)" KYTGYKEMPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.8%) "GO:0005840 (16.8%) GO:1990904 (16.8%) GO:0005737 (16.1%)" "GO:0003735 (16.8%) GO:0019843 (16.8%)" translation (16.8%) "ribosome (16.8%) ribonucleoprotein complex (16.8%) cytoplasm (16.1%)" "structural constituent of ribosome (16.8%) rRNA binding (16.8%)" "IPR000630 (34.3%) IPR035987 (34.3%) IPR047863 (31.3%)" "Small ribosomal subunit protein uS8 (34.3%) Small ribosomal subunit protein uS8 superfamily (34.3%) Small ribosomal subunit protein uS8, conserved site (31.3%)" LFIVTGDSEAPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" DALLENVTVDGEGKIDFADKSVTENTR Heminiphilus faecis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Heminiphilus Heminiphilus faecis 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) YGNINLPSDNNGNMDIHVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GAGVHHVAFAIEDGVANALAEAESKEIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (46.7%) "GO:0004493 (46.7%) GO:0016829 (3.3%) GO:0051213 (3.3%)" L-methylmalonyl-CoA metabolic process (46.7%) "methylmalonyl-CoA epimerase activity (46.7%) lyase activity (3.3%) dioxygenase activity (3.3%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" LFDFAELGDMWHTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.2.1.177 (100%) alpha-D-xyloside xylohydrolase (100%) GO:0000272 (33.3%) "GO:0030246 (33.3%) GO:0004553 (29.2%) GO:0061634 (4.2%)" polysaccharide catabolic process (33.3%) "carbohydrate binding (33.3%) hydrolase activity, hydrolyzing O-glycosyl compounds (29.2%) alpha-D-xyloside xylohydrolase (4.2%)" "IPR000322 (6%) IPR000421 (6%) IPR002105 (6%)" "Glycoside hydrolase family 31, TIM barrel domain (6%) Coagulation factor 5/8, C-terminal domain (6%) Dockerin type I repeat (6%)" GDTATNTLKPATVETGAEVR Bacteria Bacteria GO:0043043 (33.3%) "GO:0005829 (31.5%) GO:0005737 (1.9%)" GO:0003746 (33.3%) peptide biosynthetic process (33.3%) "cytosol (31.5%) cytoplasm (1.9%)" translation elongation factor activity (33.3%) "IPR012340 (11.5%) IPR013852 (11.5%) IPR015365 (11.5%)" "Nucleic acid-binding, OB-fold (11.5%) Translation elongation factor P/YeiP, conserved site (11.5%) Elongation factor P, C-terminal (11.5%)" LLDPPLHEFVPHDLKGQEEMAETMGVSVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" MKEEGYGEYLK Bacteria Bacteria "1.8.4.11 (51.4%) 1.8.4.12 (48.6%)" "peptide-methionine (S)-S-oxide reductase (51.4%) peptide-methionine (R)-S-oxide reductase (48.6%)" "GO:0006979 (17%) GO:0030091 (17%) GO:0034599 (0.9%)" GO:0005737 (17.9%) "GO:0008113 (17.9%) GO:0033743 (17.9%) GO:0033744 (10.4%)" "response to oxidative stress (17%) protein repair (17%) cellular response to oxidative stress (0.9%)" cytoplasm (17.9%) "peptide-methionine (S)-S-oxide reductase activity (17.9%) peptide-methionine (R)-S-oxide reductase activity (17.9%) L-methionine (S)-S-oxide reductase activity (10.4%)" "IPR002569 (20%) IPR002579 (20%) IPR011057 (20%)" "Peptide methionine sulphoxide reductase MsrA domain (20%) Peptide methionine sulphoxide reductase MrsB domain (20%) Mss4-like superfamily (20%)" IAGNPLPGMPWEERPEGCK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.319 (100%) beta-1,4-mannooligosaccharide phosphorylase (100%) "GO:0016757 (70.6%) GO:0016798 (29.4%)" "glycosyltransferase activity (70.6%) hydrolase activity, acting on glycosyl bonds (29.4%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" KIVINQGLGMAVADKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.9%) "GO:0005840 (16.9%) GO:1990904 (16.7%) GO:0022625 (0.2%)" "GO:0003735 (16.9%) GO:0000049 (16.2%) GO:0019843 (16.2%)" translation (16.9%) "ribosome (16.9%) ribonucleoprotein complex (16.7%) cytosolic large ribosomal subunit (0.2%)" "structural constituent of ribosome (16.9%) tRNA binding (16.2%) rRNA binding (16.2%)" "IPR002132 (20%) IPR022803 (20%) IPR031309 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5 domain superfamily (20%) Large ribosomal subunit protein uL5, C-terminal (20%)" SAMLNIEQVVPADPKQPYDVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0015977 (22.2%) GO:0009317 (22.2%) "GO:0003989 (22.2%) GO:0004658 (22.2%) GO:0016740 (7.4%)" carbon fixation (22.2%) acetyl-CoA carboxylase complex (22.2%) "acetyl-CoA carboxylase activity (22.2%) propionyl-CoA carboxylase activity (22.2%) transferase activity (7.4%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" SGETPDTTISDLAVAK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.5%) "GO:0000015 (16.5%) GO:0005576 (16.5%) GO:0009986 (16.2%)" "GO:0000287 (16.5%) GO:0004634 (16.5%) GO:0002020 (0.4%)" glycolytic process (16.5%) "phosphopyruvate hydratase complex (16.5%) extracellular region (16.5%) cell surface (16.2%)" "magnesium ion binding (16.5%) phosphopyruvate hydratase activity (16.5%) protease binding (0.4%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" TQRIEELQAELASK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0007186 (100%) G protein-coupled receptor signaling pathway (100%) IPR015898 (100%) G-protein, gamma subunit-like domain (100%) IQVDVLDCLGCGNCADVCPGNPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (72.7%) 1.2.7.- (18.2%) 1.2.1.51 (9.1%)" "pyruvate synthase (72.7%) With an iron-sulfur protein as acceptor (18.2%) pyruvate dehydrogenase (NADP(+)) (9.1%)" "GO:0006979 (14.7%) GO:0022900 (14.4%) GO:0044281 (11.8%)" "GO:0005506 (14.4%) GO:0051539 (14.4%) GO:0030976 (14.1%)" "response to oxidative stress (14.7%) electron transport chain (14.4%) small molecule metabolic process (11.8%)" "iron ion binding (14.4%) 4 iron, 4 sulfur cluster binding (14.4%) thiamine pyrophosphate binding (14.1%)" "IPR017896 (7.8%) IPR017900 (7.8%) IPR029061 (7.8%)" "4Fe-4S ferredoxin-type, iron-sulphur binding domain (7.8%) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (7.8%) Thiamin diphosphate-binding fold (7.8%)" VGDTVEVYIENQEDKKGQLVLSHRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.6%) "GO:0022627 (23.5%) GO:0005840 (1.8%) GO:1990904 (1.1%)" "GO:0003729 (24.6%) GO:0003735 (24.6%)" translation (24.6%) "cytosolic small ribosomal subunit (23.5%) ribosome (1.8%) ribonucleoprotein complex (1.1%)" "mRNA binding (24.6%) structural constituent of ribosome (24.6%)" "IPR003029 (24.8%) IPR012340 (24.8%) IPR035104 (24.8%)" "S1 domain (24.8%) Nucleic acid-binding, OB-fold (24.8%) Ribosomal protein S1-like (24.8%)" NKKPLLAACDVYRPAAIEQLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) GO:0048500 (20%) "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (20%)" SRP-dependent cotranslational protein targeting to membrane (20%) signal recognition particle (20%) "GTPase activity (20%) GTP binding (20%) 7S RNA binding (20%)" "IPR000897 (11.1%) IPR003593 (11.1%) IPR004125 (11.1%)" "Signal recognition particle, SRP54 subunit, GTPase domain (11.1%) AAA+ ATPase domain (11.1%) Signal recognition particle, SRP54 subunit, M-domain (11.1%)" LAFLFPENEQYVGEWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "4.2.1.136 (50%) 5.1.99.6 (50%)" "ADP-dependent NAD(P)H-hydrate dehydratase (50%) NAD(P)H-hydrate epimerase (50%)" "GO:0046496 (16.3%) GO:0110051 (16.3%)" "GO:0005524 (16.3%) GO:0046872 (16.3%) GO:0052855 (16.3%)" "nicotinamide nucleotide metabolic process (16.3%) metabolite repair (16.3%)" "ATP binding (16.3%) metal ion binding (16.3%) ADP-dependent NAD(P)H-hydrate dehydratase activity (16.3%)" "IPR000631 (16.7%) IPR004443 (16.7%) IPR017953 (16.7%)" "ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase (16.7%) YjeF N-terminal domain (16.7%) Carbohydrate kinase, predicted, conserved site (16.7%)" FSDITYDEIYTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.4.22 (100%) UMP kinase (100%) "GO:0006225 (20%) GO:0044210 (20%)" GO:0005737 (20%) "GO:0005524 (20%) GO:0033862 (20%)" "UDP biosynthetic process (20%) 'de novo' CTP biosynthetic process (20%)" cytoplasm (20%) "ATP binding (20%) UMP kinase activity (20%)" "IPR001048 (25%) IPR011817 (25%) IPR015963 (25%)" "Aspartate/glutamate/uridylate kinase (25%) Uridylate kinase (25%) Uridylate kinase, bacteria (25%)" GAQEAGVQTVVFDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR005484 (40%) IPR004389 (30%) IPR057268 (30%)" "Large ribosomal subunit protein uL18, bacterial/plantae/animalia (40%) Large ribosomal subunit protein uL18, bacteria (30%) Large ribosomal subunit protein uL18 (30%)" VALDCESFGADGITVHPRPDER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.99.2 (100%) pyridoxine 5'-phosphate synthase (100%) GO:0008615 (33.3%) GO:0005829 (33.3%) GO:0033856 (33.3%) pyridoxine biosynthetic process (33.3%) cytosol (33.3%) pyridoxine 5'-phosphate synthase activity (33.3%) "IPR004569 (33.3%) IPR013785 (33.3%) IPR036130 (33.3%)" "Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ (33.3%) Aldolase-type TIM barrel (33.3%) Pyridoxine 5'-phosphate synthase (33.3%)" SLVHFSYGMVELPEGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.19 (100%) arginine--tRNA ligase (100%) GO:0006420 (25.1%) GO:0005737 (24.8%) "GO:0004814 (25.1%) GO:0005524 (25.1%)" arginyl-tRNA aminoacylation (25.1%) cytoplasm (24.8%) "arginine-tRNA ligase activity (25.1%) ATP binding (25.1%)" "IPR001278 (12.6%) IPR014729 (12.6%) IPR035684 (12.6%)" "Arginine-tRNA ligase (12.6%) Rossmann-like alpha/beta/alpha sandwich fold (12.6%) Arginyl-tRNA synthetase, catalytic core domain (12.6%)" SVGIVANQPAYLAGVLDIDASDKASR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.-.-.- (100%) Ligases (100%) GO:0015977 (22.7%) GO:0009317 (22.7%) "GO:0004658 (23.3%) GO:0003989 (22.7%) GO:0016740 (8.7%)" carbon fixation (22.7%) acetyl-CoA carboxylase complex (22.7%) "propionyl-CoA carboxylase activity (23.3%) acetyl-CoA carboxylase activity (22.7%) transferase activity (8.7%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" LLADGVADIILIGNPAEIKELAAGFGLNHIGEATLVDPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0008959 (66.7%) GO:0016407 (33.3%)" "phosphate acetyltransferase activity (66.7%) acetyltransferase activity (33.3%)" "IPR002505 (16.7%) IPR004614 (16.7%) IPR012147 (16.7%)" "Phosphate acetyl/butaryl transferase (16.7%) Phosphate acetyltransferase (16.7%) Phosphate acetyl/butyryltransferase (16.7%)" SMGNMLMDQSDNYK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR027823 (100%) Domain of unknown function DUF4468 with TBP-like fold (100%) NIIIVDIQDIYTQPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR032286 (100%) Protein of unknown function DUF4837 (100%) VIGNPDQETSHDCICVSYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (3.8%) "GO:0000287 (19.2%) GO:0004743 (19.2%) GO:0005524 (19.2%)" response to stress (3.8%) "magnesium ion binding (19.2%) pyruvate kinase activity (19.2%) ATP binding (19.2%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" FITNGDADIHLVLAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.8.1 (47.4%) 1.3.99.- (31.6%) 1.3.1.95 (10.5%)" "short-chain acyl-CoA dehydrogenase (47.4%) With other acceptors (31.6%) acryloyl-CoA reductase (NADH) (10.5%)" "GO:0050660 (49.7%) GO:0003995 (46.4%) GO:0016937 (3.3%)" "flavin adenine dinucleotide binding (49.7%) acyl-CoA dehydrogenase activity (46.4%) short-chain fatty acyl-CoA dehydrogenase activity (3.3%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009100 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily (9.1%)" SQDGAAMSFGR Actinomycetes Bacteria Bacillati Actinomycetota Actinomycetes 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006006 (31%) GO:0005829 (33.3%) "GO:0008861 (33.3%) GO:0016829 (1.2%) GO:0016491 (0.3%)" glucose metabolic process (31%) cytosol (33.3%) "formate C-acetyltransferase activity (33.3%) lyase activity (1.2%) oxidoreductase activity (0.3%)" "IPR004184 (20.9%) IPR050244 (20.9%) IPR001150 (20.5%)" "Pyruvate formate lyase domain (20.9%) Autonomous Glycyl Radical Cofactor (20.9%) Glycine radical domain (20.5%)" FYPMDFTFVCPTELHAFQQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" SFTQDDAHIFCRPEQVKDEFLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.3%) GO:0005737 (16.3%) "GO:0000049 (16.3%) GO:0004829 (16.3%) GO:0005524 (16.3%)" threonyl-tRNA aminoacylation (16.3%) cytoplasm (16.3%) "tRNA binding (16.3%) threonine-tRNA ligase activity (16.3%) ATP binding (16.3%)" "IPR002314 (7.8%) IPR002320 (7.8%) IPR004154 (7.8%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.8%) Threonine-tRNA ligase, class IIa (7.8%) Anticodon-binding (7.8%)" AFKPVGEWNTEEIMADGDHIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) "IPR004155 (25%) IPR010496 (25%) IPR011989 (25%)" "PBS lyase HEAT-like repeat (25%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (25%) Armadillo-like helical (25%)" ANPIKPVIAFEEFEKLDIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004825 (16.7%) GO:0005524 (16.7%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) methionine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002547 (8.7%) IPR004495 (8.7%) IPR023458 (8.7%)" "tRNA-binding domain (8.7%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.7%) Methionine-tRNA ligase, type 1 (8.7%)" EGLNATGVSNLLNKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" INIIDTPGHADFGGEVER root "3.6.5.- (100%) 2.1.1.228 (0%)" "Acting on GTP; involved in cellular and subcellular movement (100%) tRNA (guanine(37)-N(1))-methyltransferase (0%)" "GO:0000027 (10.2%) GO:0009409 (6.3%) GO:0010467 (5.1%)" "GO:0005829 (10.8%) GO:1990904 (10.8%) GO:0005737 (0.4%)" "GO:0003924 (11.2%) GO:0005525 (11.2%) GO:0043022 (10.2%)" "ribosomal large subunit assembly (10.2%) response to cold (6.3%) gene expression (5.1%)" "cytosol (10.8%) ribonucleoprotein complex (10.8%) cytoplasm (0.4%)" "GTPase activity (11.2%) GTP binding (11.2%) ribosome binding (10.2%)" "IPR000795 (6.8%) IPR005225 (6.8%) IPR027417 (6.8%)" "Translational (tr)-type GTP-binding domain (6.8%) Small GTP-binding domain (6.8%) P-loop containing nucleoside triphosphate hydrolase (6.8%)" KVEIDEPGDTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) GO:0000428 (17.2%) "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (15.5%)" DNA-templated transcription (16.9%) DNA-directed RNA polymerase complex (17.2%) "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (15.5%)" "IPR007081 (9.3%) IPR045867 (9.3%) IPR000722 (9%)" "RNA polymerase Rpb1, domain 5 (9.3%) DNA-directed RNA polymerase, subunit beta-prime (9.3%) RNA polymerase, alpha subunit (9%)" GLNSSYAIYQDVTGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.86 (94.1%) 1.1.1.- (5.9%)" "ketol-acid reductoisomerase (NADP(+)) (94.1%) With NAD(+) or NADP(+) as acceptor (5.9%)" "GO:0009097 (20.7%) GO:0009099 (20.7%)" "GO:0004455 (20.7%) GO:0046872 (19.5%) GO:0016853 (18.3%)" "isoleucine biosynthetic process (20.7%) L-valine biosynthetic process (20.7%)" "ketol-acid reductoisomerase activity (20.7%) metal ion binding (19.5%) isomerase activity (18.3%)" "IPR013023 (17.2%) IPR013116 (17.2%) IPR036291 (17.2%)" "Ketol-acid reductoisomerase (17.2%) Ketol-acid reductoisomerase, N-terminal (17.2%) NAD(P)-binding domain superfamily (17.2%)" FLTDYINGDTYYK root "3.1.6.- (42.9%) 2.7.1.- (28.6%) 2.7.1.162 (28.6%)" "Sulfuric ester hydrolases (42.9%) Phosphotransferases with an alcohol group as acceptor (28.6%) N-acetylhexosamine 1-kinase (28.6%)" "GO:0016740 (73.9%) GO:0016301 (10.9%) GO:0016787 (6.5%)" "transferase activity (73.9%) kinase activity (10.9%) hydrolase activity (6.5%)" "IPR002575 (33.1%) IPR011009 (33.1%) IPR050249 (33.1%)" "Aminoglycoside phosphotransferase (33.1%) Protein kinase-like domain superfamily (33.1%) Pseudomonas-type Homoserine Kinase (33.1%)" TKENLGSGFISLFR Pseudomonadati Bacteria Pseudomonadati 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) "GO:0006614 (16.3%) GO:0051301 (2.5%) GO:0006605 (0%)" "GO:0005886 (16.2%) GO:0005737 (16.2%) GO:0005829 (0%)" "GO:0005525 (16.3%) GO:0003924 (16.2%) GO:0005047 (16.2%)" "SRP-dependent cotranslational protein targeting to membrane (16.3%) cell division (2.5%) protein targeting (0%)" "plasma membrane (16.2%) cytoplasm (16.2%) cytosol (0%)" "GTP binding (16.3%) GTPase activity (16.2%) signal recognition particle binding (16.2%)" "IPR042101 (14.4%) IPR013822 (14.4%) IPR036225 (14.3%)" "Signal recognition particle SRP54, N-terminal domain superfamily (14.4%) Signal recognition particle SRP54, helical bundle (14.4%) SRP/SRP receptor, N-terminal (14.3%)" FVVDPQGIIQAIEVTAEGIGR root "1.11.1.26 (98.8%) 1.11.1.15 (0.6%) 1.11.1.24 (0.4%)" "NADH-dependent peroxiredoxin (98.8%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (0.6%) thioredoxin-dependent peroxiredoxin (0.4%)" "GO:0006979 (14.6%) GO:0042744 (14.6%) GO:0045454 (14.6%)" "GO:0005829 (14.6%) GO:0016020 (0.1%) GO:0005737 (0%)" "GO:0008379 (14.6%) GO:0102039 (11.9%) GO:0004601 (0.1%)" "response to oxidative stress (14.6%) hydrogen peroxide catabolic process (14.6%) cell redox homeostasis (14.6%)" "cytosol (14.6%) membrane (0.1%) cytoplasm (0%)" "thioredoxin peroxidase activity (14.6%) NADH-dependent peroxiredoxin activity (11.9%) peroxidase activity (0.1%)" "IPR036249 (14.5%) IPR050217 (14.5%) IPR019479 (14.4%)" "Thioredoxin-like superfamily (14.5%) Thiol-specific antioxidant peroxiredoxin (14.5%) Peroxiredoxin, C-terminal (14.4%)" LIFEIEGVPFDIAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (20%) GO:0022625 (20%) "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) cytosolic large ribosomal subunit (20%) "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000114 (20%) IPR016180 (20%) IPR020798 (20%)" "Large ribosomal subunit protein uL16, bacteria (20%) Large ribosomal subunit protein uL16 domain (20%) Large ribosomal subunit protein uL16, conserved site (20%)" SIPQEEMAVAGELRPAPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.1.2.9 (100%) methionyl-tRNA formyltransferase (100%) GO:0005829 (48.5%) "GO:0004479 (48.5%) GO:0016740 (3%)" cytosol (48.5%) "methionyl-tRNA formyltransferase activity (48.5%) transferase activity (3%)" "IPR002376 (14.2%) IPR005793 (14.2%) IPR005794 (14.2%)" "Formyl transferase, N-terminal (14.2%) Formyl transferase, C-terminal (14.2%) Methionyl-tRNA formyltransferase (14.2%)" KQSGGAGQFGEVHLIIEPYYEGMPAPDTYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.4%) "GO:0003746 (25.4%) GO:0005525 (25.4%) GO:0003924 (23.9%)" ribosome disassembly (25.4%) "translation elongation factor activity (25.4%) GTP binding (25.4%) GTPase activity (23.9%)" "IPR000640 (7.8%) IPR005517 (7.8%) IPR009000 (7.8%)" "Elongation factor EFG, domain V-like (7.8%) Translation elongation factor EFG/EF2, domain IV (7.8%) Translation protein, beta-barrel domain superfamily (7.8%)" IFINTGSTSIIPAIDGLKDSKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.16.1.1 (100%) mercury(II) reductase (100%) "GO:0003955 (46.5%) GO:0050660 (46.5%) GO:0016152 (4.7%)" "NAD(P)H dehydrogenase (quinone) activity (46.5%) flavin adenine dinucleotide binding (46.5%) mercury (II) reductase (NADP+) activity (4.7%)" "IPR001100 (20%) IPR004099 (20%) IPR016156 (20%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (20%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (20%) FAD/NAD-linked reductase, dimerisation domain superfamily (20%)" AEIGEHDQDISKEEILAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" LGAVVIPATHLLTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.2.1.1 (100%) acetate--CoA ligase (100%) "GO:0006633 (16.2%) GO:0006637 (16.2%)" GO:0016020 (3.1%) "GO:0004321 (16.2%) GO:0015645 (16.2%) GO:0005524 (16%)" "fatty acid biosynthetic process (16.2%) acyl-CoA metabolic process (16.2%)" membrane (3.1%) "fatty-acyl-CoA synthase activity (16.2%) fatty acid ligase activity (16.2%) ATP binding (16%)" "IPR000873 (16.7%) IPR051087 (16.7%) IPR020845 (16.7%)" "AMP-dependent synthetase/ligase domain (16.7%) Mitochondrial Acyl-CoA Synthetase Medium-Chain (16.7%) AMP-binding, conserved site (16.7%)" VSFTAEQIRDNAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006412 (16.7%) GO:0006417 (16.7%)" GO:0015934 (16.7%) "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" "translation (16.7%) regulation of translation (16.7%)" large ribosomal subunit (16.7%) "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR002143 (16.7%) IPR005878 (16.7%) IPR016095 (16.7%)" "Large ribosomal subunit protein uL1 (16.7%) Large ribosomal subunit protein uL1, bacteria (16.7%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" VELEPTVEPIVEPEPIKEKPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0043093 (33.3%) "GO:0009898 (33.3%) GO:0032153 (33.3%)" FtsZ-dependent cytokinesis (33.3%) "cytoplasmic side of plasma membrane (33.3%) cell division site (33.3%)" "IPR003494 (25%) IPR020823 (25%) IPR043129 (25%)" "SHS2 domain inserted in FtsA (25%) Cell division protein FtsA (25%) ATPase, nucleotide binding domain (25%)" IVYTPIHGTGVK Bacteria Bacteria "5.4.2.2 (87.5%) 5.4.2.- (12.5%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (87.5%) Phosphotransferases (phosphomutases) (12.5%)" "GO:0005975 (24.5%) GO:0006166 (24.5%)" "GO:0008973 (24.5%) GO:0000287 (24%) GO:0004614 (2.6%)" "carbohydrate metabolic process (24.5%) purine ribonucleoside salvage (24.5%)" "phosphopentomutase activity (24.5%) magnesium ion binding (24%) phosphoglucomutase activity (2.6%)" "IPR016055 (13%) IPR005844 (12.8%) IPR005845 (12.8%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (13%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.8%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.8%)" GANHQCAPIPEEGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GYDHTYILNKEDNELSYCAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (16.7%) IPR011013 (16.7%) IPR014718 (16.7%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (16.7%) Galactose mutarotase-like domain superfamily (16.7%) Glycoside hydrolase-type carbohydrate-binding (16.7%)" GKLPNEEKSALEIWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (20%) GO:0015935 (20%) "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) small ribosomal subunit (20%) "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" TSVDSKLEEMEEKYPVEQIAVKNEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IASANQVTTGVTSR Bacteria Bacteria "GO:0015920 (23.6%) GO:0043165 (23.6%) GO:0061024 (1.9%)" "GO:0009279 (25.5%) GO:1990351 (25.5%)" "lipopolysaccharide transport (23.6%) Gram-negative-bacterium-type cell outer membrane assembly (23.6%) membrane organization (1.9%)" "cell outer membrane (25.5%) transporter complex (25.5%)" "IPR007543 (26%) IPR050218 (26%) IPR020889 (24.1%)" "LptD, C-terminal (26%) Lipopolysaccharide Assembly Protein LptD (26%) LPS-assembly protein LptD (24.1%)" VGNTLSESGTVSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.13 (100%) glutamate synthase (NADPH) (100%) "GO:0016740 (94.1%) GO:0004355 (2.9%) GO:0016779 (2.9%)" "transferase activity (94.1%) glutamate synthase (NADPH) activity (2.9%) nucleotidyltransferase activity (2.9%)" "IPR029044 (98.7%) IPR005835 (1.3%)" "Nucleotide-diphospho-sugar transferases (98.7%) Nucleotidyl transferase domain (1.3%)" KLEYTDEEYAQEIEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.17.7.3 (96.6%) 1.17.7.1 (3.4%)" "(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (96.6%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) (3.4%)" "GO:0016114 (17%) GO:0019288 (17%)" "GO:0005506 (17%) GO:0046429 (17%) GO:0051539 (17%)" "terpenoid biosynthetic process (17%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17%)" "iron ion binding (17%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17%) 4 iron, 4 sulfur cluster binding (17%)" "IPR004588 (25%) IPR011005 (25%) IPR017178 (25%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25%) Dihydropteroate synthase-like superfamily (25%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (25%)" IFAVAQALEQGYSVDKIHELSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (14%) GO:0006526 (14%) GO:0006541 (14%)" GO:0005737 (14%) "GO:0004088 (14%) GO:0005524 (14%) GO:0046872 (14%)" "pyrimidine nucleotide biosynthetic process (14%) L-arginine biosynthetic process (14%) glutamine metabolic process (14%)" cytoplasm (14%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14%) ATP binding (14%) metal ion binding (14%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" RKLDELDLIVVDHPQVK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "5.1.3.15 (99.4%) 5.1.3.- (0.6%)" "glucose-6-phosphate 1-epimerase (99.4%) Acting on carbohydrates and derivatives (0.6%)" "GO:0005975 (25%) GO:0006974 (0.2%)" "GO:0005737 (24.4%) GO:0005829 (0.2%)" "GO:0030246 (25.2%) GO:0047938 (24.8%) GO:0003824 (0.2%)" "carbohydrate metabolic process (25%) DNA damage response (0.2%)" "cytoplasm (24.4%) cytosol (0.2%)" "carbohydrate binding (25.2%) glucose-6-phosphate 1-epimerase activity (24.8%) catalytic activity (0.2%)" "IPR014718 (25.6%) IPR011013 (25.4%) IPR008183 (25.1%)" "Glycoside hydrolase-type carbohydrate-binding (25.6%) Galactose mutarotase-like domain superfamily (25.4%) Aldose 1-/Glucose-6-phosphate 1-epimerase (25.1%)" VFGENVVTSEEEFKNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" FLVDYAHLDASK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (61.3%) "GO:0016853 (35.5%) GO:0003755 (3.2%)" plasma membrane (61.3%) "isomerase activity (35.5%) peptidyl-prolyl cis-trans isomerase activity (3.2%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" ILPVVITYYADK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (14.4%) IPR006519 (14.4%) IPR020783 (14.4%)" "Ribosomal protein uL11 (14.4%) Large ribosomal subunit protein uL11, bacteria (14.4%) Large ribosomal subunit protein uL11, C-terminal (14.4%)" LGFMSFYVK Pseudomonadati Bacteria Pseudomonadati "2.3.1.61 (99.3%) 2.3.1.- (0.7%)" "dihydrolipoyllysine-residue succinyltransferase (99.3%) Transferring groups other than amino-acyl groups (0.7%)" "GO:0006099 (20.1%) GO:0033512 (19.5%) GO:0006554 (0.3%)" "GO:0005829 (20.1%) GO:0045252 (19.8%) GO:0005737 (0%)" "GO:0004149 (20.1%) GO:0016746 (0.2%) GO:0016491 (0%)" "tricarboxylic acid cycle (20.1%) L-lysine catabolic process to acetyl-CoA via saccharopine (19.5%) lysine catabolic process (0.3%)" "cytosol (20.1%) oxoglutarate dehydrogenase complex (19.8%) cytoplasm (0%)" "dihydrolipoyllysine-residue succinyltransferase activity (20.1%) acyltransferase activity (0.2%) oxidoreductase activity (0%)" "IPR001078 (11.3%) IPR050537 (11.3%) IPR023213 (11.3%)" "2-oxoacid dehydrogenase acyltransferase, catalytic domain (11.3%) 2-oxoacid dehydrogenase (11.3%) Chloramphenicol acetyltransferase-like domain superfamily (11.3%)" TAVTPNASQTPFSPTGVQTALQMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.2.1.22 (100%) alpha-galactosidase (100%) "GO:0030246 (62.8%) GO:0016787 (34.9%) GO:0004557 (2.3%)" "carbohydrate binding (62.8%) hydrolase activity (34.9%) alpha-galactosidase activity (2.3%)" "IPR013785 (13.9%) IPR014718 (13.9%) IPR017853 (13.9%)" "Aldolase-type TIM barrel (13.9%) Glycoside hydrolase-type carbohydrate-binding (13.9%) Glycoside hydrolase superfamily (13.9%)" RLMEFLGNVVPFVSDMPVVHNTR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0032790 (25.4%) "GO:0003746 (25.4%) GO:0005525 (25.4%) GO:0003924 (23.9%)" ribosome disassembly (25.4%) "translation elongation factor activity (25.4%) GTP binding (25.4%) GTPase activity (23.9%)" "IPR009000 (8%) IPR027417 (8%) IPR053905 (8%)" "Translation protein, beta-barrel domain superfamily (8%) P-loop containing nucleoside triphosphate hydrolase (8%) Elongation factor G-like, domain II (8%)" LITAVPVDKATEER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0005886 (29.5%) GO:0045259 (29.5%)" "GO:0046933 (29.5%) GO:0016787 (11.5%)" "plasma membrane (29.5%) proton-transporting ATP synthase complex (29.5%)" "proton-transporting ATP synthase activity, rotational mechanism (29.5%) hydrolase activity (11.5%)" "IPR000711 (50%) IPR026015 (50%)" "ATPase, OSCP/delta subunit (50%) F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily (50%)" EGDNYVVLSDILGDEDHLGDMDFK root 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.4%) GO:0006396 (13.9%) GO:0006401 (0%)" "GO:0005829 (14.4%) GO:0016020 (0%) GO:1990061 (0%)" "GO:0000175 (14.4%) GO:0003723 (14.4%) GO:0004654 (14.4%)" "mRNA catabolic process (14.4%) RNA processing (13.9%) RNA catabolic process (0%)" "cytosol (14.4%) membrane (0%) bacterial degradosome (0%)" "3'-5'-RNA exonuclease activity (14.4%) RNA binding (14.4%) polyribonucleotide nucleotidyltransferase activity (14.4%)" "IPR012162 (7.8%) IPR027408 (7.8%) IPR036345 (7.8%)" "Polyribonucleotide nucleotidyltransferase (7.8%) PNPase/RNase PH domain superfamily (7.8%) Exoribonuclease, PH domain 2 superfamily (7.8%)" AVKEACGLGLKEAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0022625 (25%) GO:0005840 (0.1%)" "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) "cytosolic large ribosomal subunit (25%) ribosome (0.1%)" "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR013823 (20%) IPR014719 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, C-terminal (20%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20%)" RQNSDPTVAVIAAALK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "6.3.4.14 (66.7%) 6.4.1.7 (33.3%)" "biotin carboxylase (66.7%) 2-oxoglutarate carboxylase (33.3%)" GO:2001295 (17.5%) "GO:0005524 (22.5%) GO:0046872 (22.5%) GO:0003989 (15%)" malonyl-CoA biosynthetic process (17.5%) "ATP binding (22.5%) metal ion binding (22.5%) acetyl-CoA carboxylase activity (15%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" LMDLTTLNDDDTDEKVIALCHQAK root 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (20%) GO:0016052 (19.7%) GO:0006018 (18.8%)" "GO:0005737 (19.7%) GO:0005829 (0.3%) GO:0016020 (0.1%)" "GO:0004139 (20%) GO:0016829 (0.6%) GO:0004645 (0.1%)" "deoxyribonucleotide catabolic process (20%) carbohydrate catabolic process (19.7%) 2-deoxyribose 1-phosphate catabolic process (18.8%)" "cytoplasm (19.7%) cytosol (0.3%) membrane (0.1%)" "deoxyribose-phosphate aldolase activity (20%) lyase activity (0.6%) 1,4-alpha-oligoglucan phosphorylase activity (0.1%)" "IPR002915 (25%) IPR011343 (25%) IPR013785 (25%)" "DeoC/FbaB/LacD aldolase (25%) Deoxyribose-phosphate aldolase (25%) Aldolase-type TIM barrel (25%)" FAVQHTYNEQQIGWFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" VGEISKPFTMLTNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0003755 (100%) peptidyl-prolyl cis-trans isomerase activity (100%) "IPR000297 (20%) IPR023058 (20%) IPR027304 (20%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (20%) Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site (20%) Trigger factor/SurA domain superfamily (20%)" VQDQNQIPELNVYQCGTYQMHSLQEAQDIAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.4.1.21 (100%) S-ribosylhomocysteine lyase (100%) "GO:0009372 (31.8%) GO:0019284 (0.3%) GO:2000145 (0.3%)" GO:0005829 (0.3%) "GO:0005506 (31.8%) GO:0043768 (31.8%) GO:0016787 (2.7%)" "quorum sensing (31.8%) L-methionine salvage from S-adenosylmethionine (0.3%) regulation of cell motility (0.3%)" cytosol (0.3%) "iron ion binding (31.8%) S-ribosylhomocysteine lyase activity (31.8%) hydrolase activity (2.7%)" "IPR003815 (33.3%) IPR011249 (33.3%) IPR037005 (33.3%)" "S-ribosylhomocysteinase (LuxS) (33.3%) Metalloenzyme, LuxS/M16 peptidase-like (33.3%) S-ribosylhomocysteinase (LuxS) superfamily (33.3%)" KADNGWLQLNTAK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.5.2.17 (100%) hydroxyisourate hydrolase (100%) "GO:0006144 (32.9%) GO:0051289 (0.4%)" "GO:0042597 (32.2%) GO:0032991 (0.4%)" "GO:0033971 (32.2%) GO:0016787 (1.8%) GO:0042802 (0.4%)" "purine nucleobase metabolic process (32.9%) protein homotetramerization (0.4%)" "periplasmic space (32.2%) protein-containing complex (0.4%)" "hydroxyisourate hydrolase activity (32.2%) hydrolase activity (1.8%) identical protein binding (0.4%)" "IPR023416 (17.1%) IPR036817 (17.1%) IPR000895 (16.9%)" "Transthyretin/hydroxyisourate hydrolase domain (17.1%) Transthyretin/hydroxyisourate hydrolase domain superfamily (17.1%) Transthyretin/hydroxyisourate hydrolase (16.9%)" HLQLLPHLEELIASFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.3%) IPR008948 (14.3%) IPR018951 (14.3%)" "Fumarate lyase family (14.3%) L-Aspartase-like (14.3%) Fumarase C, C-terminal (14.3%)" LEKIPTDIYESVEEGANHIACEIAQVIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (31.1%) GO:0006044 (31.1%)" "GO:0004342 (31.1%) GO:0016853 (6.6%)" "carbohydrate metabolic process (31.1%) N-acetylglucosamine metabolic process (31.1%)" "glucosamine-6-phosphate deaminase activity (31.1%) isomerase activity (6.6%)" "IPR003737 (14.3%) IPR004547 (14.3%) IPR006148 (14.3%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.3%) Glucosamine-6-phosphate isomerase (14.3%) Glucosamine/galactosamine-6-phosphate isomerase (14.3%)" RADGSSYEADCATHGAPLGGDAYVNTIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" KGPNHGPAPIPEEGK Bacteria Bacteria "GO:0016226 (29.4%) GO:0006879 (2.9%)" GO:0005737 (2.9%) "GO:0005506 (29.4%) GO:0051536 (29.4%) GO:0008198 (2.9%)" "iron-sulfur cluster assembly (29.4%) intracellular iron ion homeostasis (2.9%)" cytoplasm (2.9%) "iron ion binding (29.4%) iron-sulfur cluster binding (29.4%) ferrous iron binding (2.9%)" IPR002871 (100%) NIF system FeS cluster assembly, NifU, N-terminal (100%) CEKVPTDIYETMEEGVQHIANEITAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (33.3%) GO:0006044 (33.3%)" GO:0004342 (33.3%) "carbohydrate metabolic process (33.3%) N-acetylglucosamine metabolic process (33.3%)" glucosamine-6-phosphate deaminase activity (33.3%) "IPR003737 (14.7%) IPR004547 (14.7%) IPR006148 (14.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.7%) Glucosamine-6-phosphate isomerase (14.7%) Glucosamine/galactosamine-6-phosphate isomerase (14.7%)" FTPGNCYGIIGANGAGK root "3.6.3.- (66.7%) 3.6.1.15 (11.1%) 3.6.3.17 (11.1%)" "Acting on acid anhydrides; catalyzing transmembrane movement of substances (66.7%) nucleoside-triphosphate phosphatase (11.1%) Transferred entry: 7.5.2.8 (11.1%)" GO:0016020 (0%) "GO:0005524 (50.4%) GO:0016887 (49.6%)" membrane (0%) "ATP binding (50.4%) ATP hydrolysis activity (49.6%)" "IPR003439 (19.8%) IPR051309 (19.8%) IPR027417 (19.7%)" "ABC transporter-like, ATP-binding domain (19.8%) ABC transporter ABCF subfamily ATPase (19.8%) P-loop containing nucleoside triphosphate hydrolase (19.7%)" KVEKEPVKEEPKPQPVAAEEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (9.1%) IPR000795 (9.1%) IPR005225 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translational (tr)-type GTP-binding domain (9.1%) Small GTP-binding domain (9.1%)" MINTFPTEGNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (20%) IPR011013 (20%) IPR014718 (20%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (20%) Galactose mutarotase-like domain superfamily (20%) Glycoside hydrolase-type carbohydrate-binding (20%)" YSSLTLTPEKLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "4.1.1.12 (90.9%) 2.6.1.1 (9.1%)" "aspartate 4-decarboxylase (90.9%) aspartate transaminase (9.1%)" GO:0006520 (27.9%) "GO:0030170 (27.9%) GO:0008483 (24.6%) GO:0047688 (11.5%)" amino acid metabolic process (27.9%) "pyridoxal phosphate binding (27.9%) transaminase activity (24.6%) aspartate 4-decarboxylase activity (11.5%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" NSPGVWEVELQSGAIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) "GO:0005737 (20%) GO:0016020 (1.1%)" "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (18.9%)" glycogen biosynthetic process (20%) "cytoplasm (20%) membrane (1.1%)" "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (18.9%)" "IPR004193 (12.7%) IPR006047 (12.7%) IPR013783 (12.7%)" "Glycoside hydrolase, family 13, N-terminal (12.7%) Glycosyl hydrolase family 13, catalytic domain (12.7%) Immunoglobulin-like fold (12.7%)" SLGNCIYLSDTADEVEKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (25%) GO:0005829 (25%) "GO:0004830 (25%) GO:0005524 (25%)" tryptophanyl-tRNA aminoacylation (25%) cytosol (25%) "tryptophan-tRNA ligase activity (25%) ATP binding (25%)" "IPR001412 (20%) IPR002305 (20%) IPR002306 (20%)" "Aminoacyl-tRNA synthetase, class I, conserved site (20%) Aminoacyl-tRNA synthetase, class Ic (20%) Tryptophan-tRNA ligase (20%)" MLFDEGVFVNPVVPPACSPNDTLIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.3.1.50 (63.6%) 2.3.1.47 (27.3%) 2.3.1.29 (9.1%)" "serine C-palmitoyltransferase (63.6%) 8-amino-7-oxononanoate synthase (27.3%) glycine C-acetyltransferase (9.1%)" "GO:0030170 (45.9%) GO:0004758 (13.5%) GO:0016740 (13.5%)" "pyridoxal phosphate binding (45.9%) serine C-palmitoyltransferase activity (13.5%) transferase activity (13.5%)" "IPR001917 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class-II, pyridoxal-phosphate binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" HGFDILVGQIDDALKLANEGK root "GO:0022900 (19.9%) GO:0006508 (0.2%) GO:0071555 (0.2%)" "GO:0042597 (19.6%) GO:0005829 (0.2%)" "GO:0005506 (19.9%) GO:0009055 (19.9%) GO:0020037 (19.9%)" "electron transport chain (19.9%) proteolysis (0.2%) cell wall organization (0.2%)" "periplasmic space (19.6%) cytosol (0.2%)" "iron ion binding (19.9%) electron transfer activity (19.9%) heme binding (19.9%)" "IPR009155 (47.8%) IPR010980 (47.8%) IPR000713 (0.4%)" "Cytochrome b562 (47.8%) Cytochrome c/b562 (47.8%) Mur ligase, N-terminal catalytic domain (0.4%)" VYDALEVQNGNER root "7.1.2.2 (94.6%) 3.6.3.14 (5.4%)" "H(+)-transporting two-sector ATPase (94.6%) Transferred entry: 7.1.2.2 (5.4%)" GO:0042777 (0.2%) "GO:0045259 (22%) GO:0005886 (20.8%) GO:0016020 (0.2%)" "GO:0005524 (22%) GO:0046933 (22%) GO:0016787 (6.6%)" proton motive force-driven plasma membrane ATP synthesis (0.2%) "proton-transporting ATP synthase complex (22%) plasma membrane (20.8%) membrane (0.2%)" "ATP binding (22%) proton-transporting ATP synthase activity, rotational mechanism (22%) hydrolase activity (6.6%)" "IPR004100 (10.5%) IPR036121 (10.5%) IPR050053 (10.5%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.5%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily (10.5%) ATPase alpha/beta chains (10.5%)" MGAPVIGINDSGGAR root "6.4.1.3 (77.6%) 6.-.-.- (12.2%) 6.4.1.2 (6.1%)" "propionyl-CoA carboxylase (77.6%) Ligases (12.2%) acetyl-CoA carboxylase (6.1%)" "GO:0015977 (17.5%) GO:0006633 (3.3%) GO:0009062 (1.9%)" "GO:0009317 (21%) GO:0005739 (3.2%)" "GO:0004658 (23.4%) GO:0003989 (21%) GO:0016740 (8.1%)" "carbon fixation (17.5%) fatty acid biosynthetic process (3.3%) fatty acid catabolic process (1.9%)" "acetyl-CoA carboxylase complex (21%) mitochondrion (3.2%)" "propionyl-CoA carboxylase activity (23.4%) acetyl-CoA carboxylase activity (21%) transferase activity (8.1%)" "IPR011762 (19.5%) IPR029045 (19.5%) IPR034733 (19.5%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (19.5%) ClpP/crotonase-like domain superfamily (19.5%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (19.5%)" MDILDETIEEINNIIK DALLENVTVDADGKIDFADK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (16.7%) GO:0005829 (16.7%) "GO:0004612 (16.7%) GO:0005524 (16.7%) GO:0016301 (16.7%)" gluconeogenesis (16.7%) cytosol (16.7%) "phosphoenolpyruvate carboxykinase (ATP) activity (16.7%) ATP binding (16.7%) kinase activity (16.7%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" EIELEDRFENMGAQLVK Bacteria Bacteria 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (16.7%) GO:0009408 (0.1%) GO:0010447 (0.1%)" "GO:0005737 (16.4%) GO:0005615 (0.1%) GO:0005886 (0.1%)" "GO:0005524 (16.7%) GO:0140662 (16.7%) GO:0016853 (16.5%)" "protein refolding (16.7%) response to heat (0.1%) response to acidic pH (0.1%)" "cytoplasm (16.4%) extracellular space (0.1%) plasma membrane (0.1%)" "ATP binding (16.7%) ATP-dependent protein folding chaperone (16.7%) isomerase activity (16.5%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR027409 (16.7%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like apical domain superfamily (16.7%)" KGPYINVKLEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0000028 (16.6%) GO:0006412 (16.6%)" "GO:0005737 (16.6%) GO:0015935 (16.6%) GO:0005840 (0.2%)" "GO:0003735 (16.6%) GO:0019843 (16.6%)" "ribosomal small subunit assembly (16.6%) translation (16.6%)" "cytoplasm (16.6%) small ribosomal subunit (16.6%) ribosome (0.2%)" "structural constituent of ribosome (16.6%) rRNA binding (16.6%)" "IPR002222 (25.1%) IPR005732 (25.1%) IPR023575 (25.1%)" "Small ribosomal subunit protein uS19 (25.1%) Small ribosomal subunit protein uS19, bacteria (25.1%) Small ribosomal subunit protein uS19, superfamily (25.1%)" ELINDNMPLEQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.3.1 (100%) citrate (Si)-synthase (100%) "GO:0005975 (24.9%) GO:0006099 (24.9%)" GO:0005829 (24.9%) "GO:0036440 (21.1%) GO:0046912 (3.8%) GO:0016746 (0.3%)" "carbohydrate metabolic process (24.9%) tricarboxylic acid cycle (24.9%)" cytosol (24.9%) "citrate synthase activity (21.1%) acyltransferase activity, acyl groups converted into alkyl on transfer (3.8%) acyltransferase activity (0.3%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" LADEGLVVTLAGWVQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.12 (100%) aspartate--tRNA ligase (100%) GO:0006422 (20%) GO:0005737 (20%) "GO:0003676 (20%) GO:0004815 (20%) GO:0005524 (20%)" aspartyl-tRNA aminoacylation (20%) cytoplasm (20%) "nucleic acid binding (20%) aspartate-tRNA ligase activity (20%) ATP binding (20%)" "IPR002312 (9.1%) IPR004115 (9.1%) IPR004364 (9.1%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.1%) GAD-like domain superfamily (9.1%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.1%)" VIPEHNILLIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25.1%) GO:0022625 (25.1%) "GO:0003735 (25.1%) GO:0019843 (24.6%)" translation (25.1%) cytosolic large ribosomal subunit (25.1%) "structural constituent of ribosome (25.1%) rRNA binding (24.6%)" "IPR009000 (25.3%) IPR019927 (25.3%) IPR000597 (24.7%)" "Translation protein, beta-barrel domain superfamily (25.3%) Large ribosomal subunit protein uL3, bacteria/organella (25.3%) Large ribosomal subunit protein uL3 (24.7%)" YISSYIPHNEEAQMVSISK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006355 (50%) GO:0003677 (50%) regulation of DNA-templated transcription (50%) DNA binding (50%) "IPR000595 (16.7%) IPR012318 (16.7%) IPR014710 (16.7%)" "Cyclic nucleotide-binding domain (16.7%) Crp-type HTH domain (16.7%) RmlC-like jelly roll fold (16.7%)" VVADLYKADAEKAEETSNR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0006950 (100%) response to stress (100%) "IPR010854 (20.2%) IPR025543 (20.2%) IPR036275 (20.2%)" "YdgH/BhsA/McbA-like domain (20.2%) Dodecin-like (20.2%) YdgH-like superfamily (20.2%)" GEFLPCVFHVSAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (73.2%) 1.2.7.- (24.4%) 1.2.1.51 (2.4%)" "pyruvate synthase (73.2%) With an iron-sulfur protein as acceptor (24.4%) pyruvate dehydrogenase (NADP(+)) (2.4%)" "GO:0006979 (14.9%) GO:0022900 (14.7%) GO:0044281 (11.6%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.3%)" "response to oxidative stress (14.9%) electron transport chain (14.7%) small molecule metabolic process (11.6%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.3%)" "IPR002880 (7.8%) IPR029061 (7.8%) IPR050722 (7.8%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.8%) Thiamin diphosphate-binding fold (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%)" NLGDIMGLMAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.10 (80%) 5.4.2.2 (13.3%) 5.4.2.8 (6.7%)" "phosphoglucosamine mutase (80%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (13.3%) phosphomannomutase (6.7%)" "GO:0005975 (14.1%) GO:0006048 (14.1%) GO:0009252 (14.1%)" GO:0005829 (14.1%) "GO:0004615 (14.1%) GO:0008966 (14.1%) GO:0000287 (13.5%)" "carbohydrate metabolic process (14.1%) UDP-N-acetylglucosamine biosynthetic process (14.1%) peptidoglycan biosynthetic process (14.1%)" cytosol (14.1%) "phosphomannomutase activity (14.1%) phosphoglucosamine mutase activity (14.1%) magnesium ion binding (13.5%)" "IPR005845 (10.3%) IPR005846 (10.3%) IPR016055 (10.3%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (10.3%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (10.3%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (10.3%)" IKPGGVLIYDGYGIINPPTRK Phocaeicola coprocola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola coprocola GO:0016903 (100%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (100%) "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" FGVEDGSVEGLRAEVR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.7%) GO:0051301 (12.3%) GO:0043335 (11.4%)" "GO:0005737 (12.2%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0003755 (12.7%) GO:0043022 (11.4%) GO:0044183 (11.4%)" "protein transport (12.7%) cell division (12.3%) protein unfolding (11.4%)" "cytoplasm (12.2%) cytosol (0.1%) membrane (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (12.7%) ribosome binding (11.4%) protein folding chaperone (11.4%)" "IPR037041 (13%) IPR008880 (12.8%) IPR027304 (12.8%)" "Trigger factor, C-terminal domain superfamily (13%) Trigger factor, C-terminal (12.8%) Trigger factor/SurA domain superfamily (12.8%)" LIFDKESHR Pseudomonadati Bacteria Pseudomonadati 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) "GO:0006103 (20.4%) GO:0006979 (20.1%) GO:0006090 (0%)" "GO:0005737 (18.1%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0004148 (20.4%) GO:0050660 (20.4%) GO:0016491 (0.2%)" "2-oxoglutarate metabolic process (20.4%) response to oxidative stress (20.1%) pyruvate metabolic process (0%)" "cytoplasm (18.1%) cytosol (0%) plasma membrane (0%)" "dihydrolipoyl dehydrogenase (NADH) activity (20.4%) flavin adenine dinucleotide binding (20.4%) oxidoreductase activity (0.2%)" "IPR004099 (12.8%) IPR016156 (12.8%) IPR050151 (12.8%)" "Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.8%) FAD/NAD-linked reductase, dimerisation domain superfamily (12.8%) Class-I pyridine nucleotide-disulfide oxidoreductase (12.8%)" SNPWQLFAETHNKGDR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria GO:0006412 (24.8%) "GO:0022627 (24.8%) GO:0005840 (0.7%)" "GO:0003729 (24.8%) GO:0003735 (24.8%)" translation (24.8%) "cytosolic small ribosomal subunit (24.8%) ribosome (0.7%)" "mRNA binding (24.8%) structural constituent of ribosome (24.8%)" "IPR003029 (20.1%) IPR012340 (20.1%) IPR035104 (20.1%)" "S1 domain (20.1%) Nucleic acid-binding, OB-fold (20.1%) Ribosomal protein S1-like (20.1%)" VTLDTATYVPIDDDHKWVVLGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0043165 (32.8%) GO:0051205 (32.8%) GO:0007155 (0.3%)" "GO:1990063 (32.8%) GO:0019867 (0.8%) GO:0009279 (0.3%)" "Gram-negative-bacterium-type cell outer membrane assembly (32.8%) protein insertion into membrane (32.8%) cell adhesion (0.3%)" "Bam protein complex (32.8%) outer membrane (0.8%) cell outer membrane (0.3%)" "IPR000184 (21.2%) IPR039910 (20.7%) IPR023707 (19.9%)" "Bacterial surface antigen (D15) (21.2%) Surface antigen D15-like (20.7%) Outer membrane protein assembly factor BamA (19.9%)" VGGLYSAAIEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0016787 (50%) GO:0046872 (50%)" "hydrolase activity (50%) metal ion binding (50%)" IPR039461 (100%) Peptidase family M49 (100%) TGVVVSNKMDK root GO:0006412 (24.8%) "GO:0022627 (24.2%) GO:0005840 (0.6%) GO:0009536 (0.6%)" "GO:0003735 (24.8%) GO:0019843 (24.2%)" translation (24.8%) "cytosolic small ribosomal subunit (24.2%) ribosome (0.6%) plastid (0.6%)" "structural constituent of ribosome (24.8%) rRNA binding (24.2%)" "IPR000266 (25.3%) IPR012340 (25.3%) IPR019979 (24.7%)" "Small ribosomal subunit protein uS17 (25.3%) Nucleic acid-binding, OB-fold (25.3%) Small ribosomal subunit protein uS17, conserved site (24.7%)" IEEMHIPMKDMWWYLDTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.3%) GO:0005737 (19.6%) "GO:0005524 (20.3%) GO:0004816 (19.9%) GO:0003676 (19.6%)" asparaginyl-tRNA aminoacylation (20.3%) cytoplasm (19.6%) "ATP binding (20.3%) asparagine-tRNA ligase activity (19.9%) nucleic acid binding (19.6%)" "IPR004364 (14.5%) IPR045864 (14.5%) IPR002312 (14.3%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (14.5%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.5%) Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.3%)" HRPDIIVPEIEAIR Pseudomonadati Bacteria Pseudomonadati "6.3.1.21 (87.5%) 2.1.2.- (12.5%)" "phosphoribosylglycinamide formyltransferase 2 (87.5%) Hydroxymethyl-, formyl- and related transferases (12.5%)" "GO:0006189 (16.2%) GO:0006164 (0.2%) GO:0009152 (0.2%)" GO:0005829 (16.6%) "GO:0005524 (16.6%) GO:0000287 (16.4%) GO:0004644 (16.4%)" "'de novo' IMP biosynthetic process (16.2%) purine nucleotide biosynthetic process (0.2%) purine ribonucleotide biosynthetic process (0.2%)" cytosol (16.6%) "ATP binding (16.6%) magnesium ion binding (16.4%) phosphoribosylglycinamide formyltransferase activity (16.4%)" "IPR003135 (12.6%) IPR011761 (12.6%) IPR013815 (12.6%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.6%) ATP-grasp fold (12.6%) ATP-grasp fold, subdomain 1 (12.6%)" FGAPPHGGLAYGLDR Bacteria Bacteria "6.1.1.12 (94.1%) 6.1.1.23 (5.9%)" "aspartate--tRNA ligase (94.1%) aspartate--tRNA(Asn) ligase (5.9%)" GO:0006422 (19.1%) GO:0005737 (19.1%) "GO:0004815 (19.1%) GO:0005524 (19.1%) GO:0003676 (18.8%)" aspartyl-tRNA aminoacylation (19.1%) cytoplasm (19.1%) "aspartate-tRNA ligase activity (19.1%) ATP binding (19.1%) nucleic acid binding (18.8%)" "IPR002312 (9.2%) IPR004364 (9.2%) IPR004524 (9.2%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.2%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.2%) Aspartate-tRNA ligase, type 1 (9.2%)" MHKEEGLSFR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.2%) GO:0006044 (29.6%) GO:0006046 (2.6%)" "GO:0004342 (32.2%) GO:0016853 (2.6%)" "carbohydrate metabolic process (32.2%) N-acetylglucosamine metabolic process (29.6%) N-acetylglucosamine catabolic process (2.6%)" "glucosamine-6-phosphate deaminase activity (32.2%) isomerase activity (2.6%)" "IPR004547 (14.8%) IPR006148 (14.8%) IPR037171 (14.8%)" "Glucosamine-6-phosphate isomerase (14.8%) Glucosamine/galactosamine-6-phosphate isomerase (14.8%) NagB/RpiA transferase-like (14.8%)" YADKNVEEISAMVGFANR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006355 (1%) "GO:0003700 (49.5%) GO:0043565 (48.5%) GO:0000976 (1%)" regulation of DNA-templated transcription (1%) "DNA-binding transcription factor activity (49.5%) sequence-specific DNA binding (48.5%) transcription cis-regulatory region binding (1%)" "IPR009057 (50%) IPR018060 (50%)" "Homedomain-like superfamily (50%) AraC-like, DNA binding HTH domain (50%)" TWEEALFENMPVAAAVTLLTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR019859 (20%) IPR022719 (20%) IPR022720 (20%)" "Gliding motility-associated protein GldM (20%) Gliding motility-associated protein GldM, C-terminal (20%) Gliding motility-associated protein GldM, N-terminal (20%)" KGYAFYQIVIADSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" STGYLVGGISPLGQK root 4.2.-.- (100%) Carbon-oxygen lyases (100%) "GO:0006412 (25.8%) GO:0010165 (0.1%) GO:0106074 (0.1%)" "GO:0005737 (19.4%) GO:0005829 (0.1%)" "GO:0002161 (25.9%) GO:0016829 (25.6%) GO:0004812 (1.7%)" "translation (25.8%) response to X-ray (0.1%) aminoacyl-tRNA metabolism involved in translational fidelity (0.1%)" "cytoplasm (19.4%) cytosol (0.1%)" "aminoacyl-tRNA deacylase activity (25.9%) lyase activity (25.6%) aminoacyl-tRNA ligase activity (1.7%)" "IPR007214 (33.5%) IPR036754 (33.5%) IPR004369 (33%)" "YbaK/aminoacyl-tRNA synthetase-associated domain (33.5%) YbaK/aminoacyl-tRNA synthetase-associated domain superfamily (33.5%) Prolyl-tRNA editing protein, YbaK/EbsC (33%)" HILAEEEEHEQDLQDYLTDIAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006879 (19.9%) GO:0005829 (19.9%) "GO:0004322 (19.9%) GO:0008199 (19.9%) GO:0020037 (19.9%)" intracellular iron ion homeostasis (19.9%) cytosol (19.9%) "ferroxidase activity (19.9%) ferric iron binding (19.9%) heme binding (19.9%)" "IPR008331 (16.7%) IPR009040 (16.7%) IPR009078 (16.7%)" "Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%) Ferritin-like superfamily (16.7%)" EYGMIDEVLIKK Pseudomonadati Bacteria Pseudomonadati 3.4.21.92 (100%) endopeptidase Clp (100%) GO:0006515 (16.7%) "GO:0005737 (16.7%) GO:0009368 (16.7%)" "GO:0004176 (16.7%) GO:0004252 (16.7%) GO:0051117 (16.7%)" protein quality control for misfolded or incompletely synthesized proteins (16.7%) "cytoplasm (16.7%) endopeptidase Clp complex (16.7%)" "ATP-dependent peptidase activity (16.7%) serine-type endopeptidase activity (16.7%) ATPase binding (16.7%)" "IPR001907 (24.8%) IPR023562 (24.8%) IPR029045 (24.8%)" "ATP-dependent Clp protease proteolytic subunit (24.8%) Clp protease proteolytic subunit /Translocation-enhancing protein TepA (24.8%) ClpP/crotonase-like domain superfamily (24.8%)" VTADKEGYQTFIIPDNVGGR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.2%) GO:0006096 (14.2%) GO:0051156 (14.2%)" GO:0005829 (14.2%) "GO:0004347 (14.2%) GO:0048029 (14.2%) GO:0097367 (14.2%)" "gluconeogenesis (14.2%) glycolytic process (14.2%) glucose 6-phosphate metabolic process (14.2%)" cytosol (14.2%) "glucose-6-phosphate isomerase activity (14.2%) monosaccharide binding (14.2%) carbohydrate derivative binding (14.2%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" RTEHSTIGVTDDGTPNGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (25%) GO:0006183 (25%)" "GO:0003938 (25%) GO:0046872 (25%)" "GMP biosynthetic process (25%) GTP biosynthetic process (25%)" "IMP dehydrogenase activity (25%) metal ion binding (25%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" AASVGMPYVIER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" FEVGEGIEKVETDFAAEVAAMSK root GO:0006414 (0.2%) "GO:0005737 (48.9%) GO:0005739 (0.1%) GO:0005829 (0.1%)" "GO:0003746 (50.4%) GO:0005085 (0.1%) GO:0008270 (0.1%)" translational elongation (0.2%) "cytoplasm (48.9%) mitochondrion (0.1%) cytosol (0.1%)" "translation elongation factor activity (50.4%) guanyl-nucleotide exchange factor activity (0.1%) zinc ion binding (0.1%)" "IPR001816 (20.3%) IPR036402 (20.3%) IPR014039 (20.2%)" "Translation elongation factor EFTs/EF1B (20.3%) Elongation factor Ts, dimerisation domain superfamily (20.3%) Translation elongation factor EFTs/EF1B, dimerisation (20.2%)" MEINDIIKPENLVYEKPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.7.1 (100%) pyruvate synthase (100%) GO:0044281 (30%) "GO:0030976 (35%) GO:0016625 (30%) GO:0019164 (5%)" small molecule metabolic process (30%) "thiamine pyrophosphate binding (35%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (30%) pyruvate synthase activity (5%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" GIINTDNLLHAILDKEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.3.1.8 (75%) 2.3.1.19 (25%)" "phosphate acetyltransferase (75%) phosphate butyryltransferase (25%)" "GO:0016746 (77.1%) GO:0008959 (18.1%) GO:0050182 (4.8%)" "acyltransferase activity (77.1%) phosphate acetyltransferase activity (18.1%) phosphate butyryltransferase activity (4.8%)" "IPR002505 (33.6%) IPR050500 (33.6%) IPR012147 (32.8%)" "Phosphate acetyl/butaryl transferase (33.6%) Phosphate Acetyltransferase/Butyryltransferase (33.6%) Phosphate acetyl/butyryltransferase (32.8%)" IDLNQPMADILK Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20.9%) "GO:0004333 (20.9%) GO:0046872 (20.9%) GO:0051539 (20.9%)" tricarboxylic acid cycle (20.9%) "fumarate hydratase activity (20.9%) metal ion binding (20.9%) 4 iron, 4 sulfur cluster binding (20.9%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR020557 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Fumarate lyase, conserved site (16.7%)" AGDNAPMAYIELVDRSEKAEAAAE Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006412 (31.8%) GO:0000027 (0.3%) GO:0002181 (0.3%)" "GO:0022625 (32.1%) GO:0005840 (2.7%) GO:0005737 (0.3%)" GO:0003735 (32.1%) "translation (31.8%) ribosomal large subunit assembly (0.3%) cytoplasmic translation (0.3%)" "cytosolic large ribosomal subunit (32.1%) ribosome (2.7%) cytoplasm (0.3%)" structural constituent of ribosome (32.1%) "IPR000456 (33.4%) IPR036373 (33.4%) IPR047859 (33.1%)" "Large ribosomal subunit protein bL17 (33.4%) Large ribosomal subunit protein bL17 superfamily (33.4%) Large ribosomal subunit protein bL17, conserved site (33.1%)" ITDLKPTIVWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" SIYGGNIVAGYIPGAEPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" ADVGFVVDPDVDR Bacteroidota Bacteria Pseudomonadati Bacteroidota "5.4.2.10 (89.1%) 5.4.2.2 (6.5%) 5.4.2.8 (4.3%)" "phosphoglucosamine mutase (89.1%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (6.5%) phosphomannomutase (4.3%)" "GO:0005975 (14.4%) GO:0006048 (14.2%) GO:0009252 (14.2%)" GO:0005829 (14.2%) "GO:0004615 (14.2%) GO:0008966 (14.2%) GO:0000287 (13.8%)" "carbohydrate metabolic process (14.4%) UDP-N-acetylglucosamine biosynthetic process (14.2%) peptidoglycan biosynthetic process (14.2%)" cytosol (14.2%) "phosphomannomutase activity (14.2%) phosphoglucosamine mutase activity (14.2%) magnesium ion binding (13.8%)" "IPR005845 (10.2%) IPR005846 (10.2%) IPR016055 (10.2%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (10.2%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (10.2%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (10.2%)" NIEGANVQTISGLNTYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" IFTDLSQEEIAALEAEQEAAPHLRPLQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.9%) GO:0005829 (16.9%) "GO:0003723 (16.9%) GO:0004831 (16.9%) GO:0005524 (16.9%)" tyrosyl-tRNA aminoacylation (16.9%) cytosol (16.9%) "RNA binding (16.9%) tyrosine-tRNA ligase activity (16.9%) ATP binding (16.9%)" "IPR001412 (12.5%) IPR002305 (12.5%) IPR002307 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Aminoacyl-tRNA synthetase, class Ic (12.5%) Tyrosine-tRNA ligase (12.5%)" SQHNNACGPFK Bacillati Bacteria Bacillati "1.4.1.2 (75%) 1.4.1.- (25%)" "glutamate dehydrogenase (75%) With NAD(+) or NADP(+) as acceptor (25%)" GO:0006538 (33.3%) "GO:0000166 (33.3%) GO:0004352 (33.3%)" L-glutamate catabolic process (33.3%) "nucleotide binding (33.3%) glutamate dehydrogenase (NAD+) activity (33.3%)" "IPR006095 (12.5%) IPR006096 (12.5%) IPR006097 (12.5%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.5%)" YGVAPSVAFGLGTANR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0015891 (23.9%) GO:0006879 (0.2%) GO:0033214 (0.2%)" "GO:0009279 (26.6%) GO:0016020 (0.2%) GO:1902495 (0.2%)" "GO:0015344 (26.6%) GO:0038023 (21.9%)" "siderophore transport (23.9%) intracellular iron ion homeostasis (0.2%) siderophore-iron import into cell (0.2%)" "cell outer membrane (26.6%) membrane (0.2%) transmembrane transporter complex (0.2%)" "siderophore uptake transmembrane transporter activity (26.6%) signaling receptor activity (21.9%)" "IPR036942 (15.6%) IPR039426 (15.6%) IPR012910 (15.1%)" "TonB-dependent receptor-like, beta-barrel domain superfamily (15.6%) TonB-dependent receptor-like (15.6%) TonB-dependent receptor, plug domain (15.1%)" TGVTAPAINVIENDKDYKVEMAAPGMTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" MTGCAIVTIPTTDGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.2.48 (100%) low-specificity L-threonine aldolase (100%) GO:0006520 (40%) "GO:0016829 (40%) GO:0008483 (20%)" amino acid metabolic process (40%) "lyase activity (40%) transaminase activity (20%)" "IPR001597 (25%) IPR015421 (25%) IPR015422 (25%)" "Aromatic amino acid beta-eliminating lyase/threonine aldolase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%) Pyridoxal phosphate-dependent transferase, small domain (25%)" MGAEVFHALKK root 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.2%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.1%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.2%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.1%)" "IPR000941 (16.7%) IPR020810 (16.7%) IPR036849 (16.7%)" "Enolase (16.7%) Enolase, C-terminal TIM barrel domain (16.7%) Enolase-like, C-terminal domain superfamily (16.7%)" FKGILTAEGAEIINEENWGLKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (16.8%) "GO:0005737 (16.8%) GO:0005840 (16.8%) GO:1990904 (15.9%)" "GO:0003735 (16.8%) GO:0070181 (16.8%)" translation (16.8%) "cytoplasm (16.8%) ribosome (16.8%) ribonucleoprotein complex (15.9%)" "structural constituent of ribosome (16.8%) small ribosomal subunit rRNA binding (16.8%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" MDELVVKDLIDR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.4.2.19 (100%) nicotinate-nucleotide diphosphorylase (carboxylating) (100%) "GO:0009435 (25%) GO:0034213 (25%)" GO:0005737 (25%) GO:0004514 (25%) "NAD+ biosynthetic process (25%) quinolinate catabolic process (25%)" cytoplasm (25%) nicotinate-nucleotide diphosphorylase (carboxylating) activity (25%) "IPR022412 (14.7%) IPR027277 (14.7%) IPR037128 (14.7%)" "Quinolinate phosphoribosyl transferase, N-terminal (14.7%) Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD (14.7%) Quinolinate phosphoribosyl transferase, N-terminal domain superfamily (14.7%)" TIIIANTSNMPVAAR root "7.1.2.2 (99.8%) 3.6.3.14 (0.2%)" "H(+)-transporting two-sector ATPase (99.8%) Transferred entry: 7.1.2.2 (0.2%)" "GO:0042777 (21.2%) GO:0046034 (2.6%) GO:0006754 (0.2%)" "GO:0005886 (2%) GO:0033178 (0.7%) GO:0012505 (0.3%)" "GO:0046961 (23.9%) GO:0005524 (23.9%) GO:0046933 (21.2%)" "proton motive force-driven plasma membrane ATP synthesis (21.2%) ATP metabolic process (2.6%) ATP biosynthetic process (0.2%)" "plasma membrane (2%) proton-transporting two-sector ATPase complex, catalytic domain (0.7%) endomembrane system (0.3%)" "proton-transporting ATPase activity, rotational mechanism (23.9%) ATP binding (23.9%) proton-transporting ATP synthase activity, rotational mechanism (21.2%)" "IPR022878 (11.2%) IPR027417 (11.2%) IPR000194 (11.2%)" "V-type ATP synthase catalytic alpha chain (11.2%) P-loop containing nucleoside triphosphate hydrolase (11.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11.2%)" TNHSQPGAELLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "4.1.1.12 (94.1%) 2.6.1.1 (5.9%)" "aspartate 4-decarboxylase (94.1%) aspartate transaminase (5.9%)" GO:0006520 (27.3%) "GO:0030170 (27.3%) GO:0008483 (24.7%) GO:0047688 (10.4%)" amino acid metabolic process (27.3%) "pyridoxal phosphate binding (27.3%) transaminase activity (24.7%) aspartate 4-decarboxylase activity (10.4%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" LYSNSHLEELLIEFEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006089 (33.8%) "GO:0046872 (33.1%) GO:0051539 (33.1%)" lactate metabolic process (33.8%) "metal ion binding (33.1%) 4 iron, 4 sulfur cluster binding (33.1%)" "IPR003741 (13.8%) IPR004452 (13.8%) IPR009051 (13.5%)" "LUD domain (13.8%) L-lactate oxidation iron-sulfur protein LutB/LldF (13.8%) Alpha-helical ferredoxin (13.5%)" FIPTFLSEGEAAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0016829 (100%) lyase activity (100%) IPR032149 (100%) Domain of unknown function DUF4988 (100%) TIAPIEEFTVSDEDFEALKQYAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.21.- (100%) Serine endopeptidases (100%) "GO:0006508 (20%) GO:0007165 (20%)" GO:0030288 (20%) "GO:0004175 (20%) GO:0008236 (20%)" "proteolysis (20%) signal transduction (20%)" outer membrane-bounded periplasmic space (20%) "endopeptidase activity (20%) serine-type peptidase activity (20%)" "IPR001478 (17.2%) IPR004447 (17.2%) IPR005151 (17.2%)" "PDZ domain (17.2%) C-terminal-processing peptidase S41A (17.2%) Tail specific protease (17.2%)" AAQLQPSAGDYSVYQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR011990 (24.4%) IPR019734 (24.4%) IPR039565 (24.4%)" "Tetratricopeptide-like helical domain superfamily (24.4%) Tetratricopeptide repeat (24.4%) Outer membrane lipoprotein BamD-like (24.4%)" EKKDRVDDALHATR root "5.6.1.7 (100%) 2.3.1.41 (0%)" "chaperonin ATPase (100%) beta-ketoacyl-[acyl-carrier-protein] synthase I (0%)" "GO:0042026 (16.9%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (16.5%) GO:1990220 (0%)" "GO:0005524 (16.9%) GO:0140662 (16.9%) GO:0016853 (16.6%)" "protein refolding (16.9%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (16.5%) GroEL-GroES complex (0%)" "ATP binding (16.9%) ATP-dependent protein folding chaperone (16.9%) isomerase activity (16.6%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR027410 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) TCP-1-like chaperonin intermediate domain superfamily (16.7%)" QNVPVLGTSPLSIDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (13.4%) GO:0006526 (13.4%) GO:0006541 (13.4%)" GO:0005737 (13.4%) "GO:0004088 (13.4%) GO:0005524 (13.4%) GO:0046872 (13.4%)" "pyrimidine nucleotide biosynthetic process (13.4%) L-arginine biosynthetic process (13.4%) glutamine metabolic process (13.4%)" cytoplasm (13.4%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.4%) ATP binding (13.4%) metal ion binding (13.4%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" EEASSDDSSDKNGIR Parabacteroides merdae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides merdae "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" AEAEANAEADKKER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0042026 (0.2%) GO:0051085 (0.2%)" "GO:0005524 (33.1%) GO:0140662 (33.1%) GO:0051082 (32.7%)" "protein refolding (0.2%) obsolete chaperone cofactor-dependent protein refolding (0.2%)" "ATP binding (33.1%) ATP-dependent protein folding chaperone (33.1%) unfolded protein binding (32.7%)" "IPR013126 (16.8%) IPR029047 (16.8%) IPR029048 (16.8%)" "Heat shock protein 70 family (16.8%) Heat shock protein 70kD, peptide-binding domain superfamily (16.8%) Heat shock protein 70kD, C-terminal domain superfamily (16.8%)" TGKLPSPQVVGAESEEEDASHAA root "GO:0006281 (25%) GO:0009432 (25%) GO:0010165 (25%)" GO:0005829 (25%) "DNA repair (25%) SOS response (25%) response to X-ray (25%)" cytosol (25%) "IPR009813 (50%) IPR038627 (50%)" "Uncharacterised protein family YebG (50%) YebG-like superfamily (50%)" LNLEGLEHIAAFMQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.5.1.18 (100%) glutathione transferase (100%) GO:0042542 (0.6%) GO:0005737 (35.8%) "GO:0004364 (31.3%) GO:0016740 (31.3%) GO:0016853 (0.6%)" response to hydrogen peroxide (0.6%) cytoplasm (35.8%) "glutathione transferase activity (31.3%) transferase activity (31.3%) isomerase activity (0.6%)" "IPR036282 (18.4%) IPR004046 (18.2%) IPR010987 (18.2%)" "Glutathione S-transferase, C-terminal domain superfamily (18.4%) Glutathione S-transferase, C-terminal (18.2%) Glutathione S-transferase, C-terminal-like (18.2%)" GCMVIKPYGYAIWEK root 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%) GO:0016020 (0%)" "GO:0004827 (20%) GO:0005524 (20%) GO:0016874 (0%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%) membrane (0%)" "proline-tRNA ligase activity (20%) ATP binding (20%) ligase activity (0%)" "IPR004499 (11.2%) IPR045864 (11.2%) IPR002314 (11.2%)" "Proline-tRNA ligase, class IIa, archaeal-type (11.2%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.2%) Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.2%)" RVENNTIMDVLQR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (17.6%) IPR014628 (17.6%) IPR014710 (17.6%)" "RmlC-like cupin domain superfamily (17.6%) Mannose-6-phosphate isomerase, Firmicutes type, short form (17.6%) RmlC-like jelly roll fold (17.6%)" GVKSDLSELSLSDLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" VIAVSSYGANKEEALAQSFANAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0009113 (20.3%) GO:0006189 (19%) GO:0006164 (1.3%)" "GO:0004637 (20.3%) GO:0005524 (19%) GO:0046872 (19%)" "purine nucleobase biosynthetic process (20.3%) 'de novo' IMP biosynthetic process (19%) purine nucleotide biosynthetic process (1.3%)" "phosphoribosylamine-glycine ligase activity (20.3%) ATP binding (19%) metal ion binding (19%)" "IPR000115 (11.4%) IPR011054 (11.4%) IPR020560 (11.4%)" "Phosphoribosylglycinamide synthetase (11.4%) Rudiment single hybrid motif (11.4%) Phosphoribosylglycinamide synthetase, C-domain (11.4%)" EIKETFKDDAEPRPVSIAGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004824 (16.7%)" lysyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) lysine-tRNA ligase activity (16.7%)" "IPR002313 (11.1%) IPR004364 (11.1%) IPR004365 (11.1%)" "Lysine-tRNA ligase, class II (11.1%) Aminoacyl-tRNA synthetase, class II (D/K/N) (11.1%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.1%)" NVADFLVSEIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" LYQPQDATTNPSLILNAAQIPEYR root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (24.8%) GO:0009052 (0.1%)" "GO:0005829 (24.9%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0004801 (25%) GO:0016740 (0.2%) GO:0016744 (0%)" "carbohydrate metabolic process (25%) pentose-phosphate shunt (24.8%) pentose-phosphate shunt, non-oxidative branch (0.1%)" "cytosol (24.9%) cytoplasm (0%) membrane (0%)" "transaldolase activity (25%) transferase activity (0.2%) transketolase or transaldolase activity (0%)" "IPR013785 (25.1%) IPR018225 (25.1%) IPR001585 (25.1%)" "Aldolase-type TIM barrel (25.1%) Transaldolase, active site (25.1%) Transaldolase/Fructose-6-phosphate aldolase (25.1%)" LIASCDEQGLTDYAGMMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" EGVKQEIAWGQYVIGDQIQGLNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) GO:0009263 (25.5%) GO:0016020 (23.5%) "GO:0046872 (25.5%) GO:0004748 (21.6%) GO:0016491 (3.9%)" deoxyribonucleotide biosynthetic process (25.5%) membrane (23.5%) "metal ion binding (25.5%) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (21.6%) oxidoreductase activity (3.9%)" "IPR000358 (20%) IPR009078 (20%) IPR012348 (20%)" "Ribonucleotide reductase small subunit family (20%) Ferritin-like superfamily (20%) Ribonucleotide reductase-like (20%)" GMGVGAPNGNYYNGTIEFAPNLPWK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (71.4%) GO:0004340 (28.6%)" "kinase activity (71.4%) glucokinase activity (28.6%)" "IPR000600 (33.9%) IPR049874 (33.9%) IPR043129 (32.1%)" "ROK family (33.9%) ROK, conserved site (33.9%) ATPase, nucleotide binding domain (32.1%)" SKVVGQDDAVQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0034605 (19%) GO:0006508 (12.1%)" GO:0005737 (19%) "GO:0005524 (19%) GO:0016887 (19%) GO:0008233 (12.1%)" "cellular response to heat (19%) proteolysis (12.1%)" cytoplasm (19%) "ATP binding (19%) ATP hydrolysis activity (19%) peptidase activity (12.1%)" "IPR001270 (8.3%) IPR001943 (8.3%) IPR003593 (8.3%)" "ClpA/B family (8.3%) UVR domain (8.3%) AAA+ ATPase domain (8.3%)" VDLPNKDTAFLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0019698 (34.1%) GO:0042840 (34.1%)" GO:0016746 (31.8%) "D-galacturonate catabolic process (34.1%) D-glucuronate catabolic process (34.1%)" acyltransferase activity (31.8%) IPR002123 (100%) Phospholipid/glycerol acyltransferase (100%) TIAEVDDSFSKYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (19.4%) GO:0005829 (19.4%) "GO:0002161 (20.4%) GO:0004832 (20.4%) GO:0005524 (20.4%)" valyl-tRNA aminoacylation (19.4%) cytosol (19.4%) "aminoacyl-tRNA deacylase activity (20.4%) valine-tRNA ligase activity (20.4%) ATP binding (20.4%)" "IPR001412 (9.1%) IPR002300 (9.1%) IPR002303 (9.1%)" "Aminoacyl-tRNA synthetase, class I, conserved site (9.1%) Aminoacyl-tRNA synthetase, class Ia (9.1%) Valine-tRNA ligase (9.1%)" ERPPTTWNLAAPDEYGFYANVNPHVDHPR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.8.5.- (93.3%) 1.8.-.- (6.7%)" "With a quinone or similar compound as acceptor (93.3%) Acting on a sulfur group of donors (6.7%)" GO:0030091 (19.9%) GO:0042597 (18.4%) "GO:0043546 (19.9%) GO:0046872 (19.9%) GO:0016672 (19.8%)" protein repair (19.9%) periplasmic space (18.4%) "molybdopterin cofactor binding (19.9%) metal ion binding (19.9%) oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor (19.8%)" "IPR036374 (26.6%) IPR000572 (26.5%) IPR022867 (23.8%)" "Oxidoreductase, molybdopterin-binding domain superfamily (26.6%) Oxidoreductase, molybdopterin-binding domain (26.5%) Protein-methionine-sulfoxide reductase subunit MsrP (23.8%)" MVVTLIHPIAMDDGLR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0046677 (0%) GO:0006414 (0%) GO:0032790 (0%)" "GO:0005829 (19.1%) GO:0032045 (7.6%) GO:0005886 (1%)" "GO:0003746 (21.8%) GO:0005525 (21.5%) GO:0003924 (9.8%)" "response to antibiotic (0%) translational elongation (0%) ribosome disassembly (0%)" "cytosol (19.1%) guanyl-nucleotide exchange factor complex (7.6%) plasma membrane (1%)" "translation elongation factor activity (21.8%) GTP binding (21.5%) GTPase activity (9.8%)" "IPR004160 (13.8%) IPR009001 (13.7%) IPR050055 (12.2%)" "Translation elongation factor EFTu/EF1A, C-terminal (13.8%) Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (13.7%) Elongation factor Tu GTPase (12.2%)" VRESDLQQILEEYGVVDSVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003723 (100%) RNA binding (100%) "IPR000504 (25%) IPR012677 (25%) IPR035979 (25%)" "RNA recognition motif domain (25%) Nucleotide-binding alpha-beta plait domain superfamily (25%) RNA-binding domain superfamily (25%)" ANLDLSKYGIVDVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.8%) GO:0005829 (18.8%) "GO:0004612 (18.8%) GO:0005524 (18.8%) GO:0046872 (18.8%)" gluconeogenesis (18.8%) cytosol (18.8%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.8%) ATP binding (18.8%) metal ion binding (18.8%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" VFLAGVGALATTVEKSQEIVDDLVK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium IPR008769 (100%) Poly granule associated (100%) HWMENIKDWCISR Bacteria Bacteria 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (20%) "GO:0005829 (20%) GO:0016020 (0.1%)" "GO:0004832 (20.1%) GO:0005524 (20.1%) GO:0002161 (19.7%)" valyl-tRNA aminoacylation (20%) "cytosol (20%) membrane (0.1%)" "valine-tRNA ligase activity (20.1%) ATP binding (20.1%) aminoacyl-tRNA deacylase activity (19.7%)" "IPR002300 (9.4%) IPR002303 (9.4%) IPR014729 (9.4%)" "Aminoacyl-tRNA synthetase, class Ia (9.4%) Valine-tRNA ligase (9.4%) Rossmann-like alpha/beta/alpha sandwich fold (9.4%)" MGGTDNMFGK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006811 (21.6%) "GO:0009279 (23%) GO:0046930 (21.6%) GO:0016020 (12.2%)" GO:0015288 (21.6%) monoatomic ion transport (21.6%) "cell outer membrane (23%) pore complex (21.6%) membrane (12.2%)" porin activity (21.6%) "IPR006665 (18.6%) IPR036737 (17.9%) IPR050330 (17.9%)" "OmpA-like domain (18.6%) OmpA-like domain superfamily (17.9%) Bacterial Outer Membrane Structural/Functional (17.9%)" DIMDAGKLVTDELVIALVK root "2.7.4.3 (99.9%) 2.7.4.- (0.1%)" "adenylate kinase (99.9%) Phosphotransferases with a phosphate group as acceptor (0.1%)" "GO:0044209 (20.3%) GO:0006172 (0.1%) GO:0009123 (0.1%)" "GO:0005737 (26.1%) GO:0005829 (0.1%) GO:0005758 (0%)" "GO:0005524 (26.3%) GO:0004017 (26.2%) GO:0016301 (0.3%)" "AMP salvage (20.3%) ADP biosynthetic process (0.1%) nucleoside monophosphate metabolic process (0.1%)" "cytoplasm (26.1%) cytosol (0.1%) mitochondrial intermembrane space (0%)" "ATP binding (26.3%) AMP kinase activity (26.2%) kinase activity (0.3%)" "IPR000850 (20.2%) IPR027417 (20.2%) IPR033690 (20.1%)" "Adenylate kinase/UMP-CMP kinase (20.2%) P-loop containing nucleoside triphosphate hydrolase (20.2%) Adenylate kinase, conserved site (20.1%)" LIPLVILNALEGK root "4.2.1.46 (99.8%) 4.2.1.47 (0.2%)" "dTDP-glucose 4,6-dehydratase (99.8%) GDP-mannose 4,6-dehydratase (0.2%)" "GO:0009225 (45%) GO:1901137 (8%) GO:0009103 (0.3%)" GO:0005829 (0%) "GO:0008460 (45.5%) GO:0016829 (0.2%) GO:0000166 (0%)" "nucleotide-sugar metabolic process (45%) carbohydrate derivative biosynthetic process (8%) lipopolysaccharide biosynthetic process (0.3%)" cytosol (0%) "dTDP-glucose 4,6-dehydratase activity (45.5%) lyase activity (0.2%) nucleotide binding (0%)" "IPR036291 (33.3%) IPR016040 (33.1%) IPR005888 (32.7%)" "NAD(P)-binding domain superfamily (33.3%) NAD(P)-binding domain (33.1%) dTDP-glucose 4,6-dehydratase (32.7%)" TCECAGVDAIVIPAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "2.1.1.- (66.7%) 2.1.1.185 (33.3%)" "Methyltransferases (66.7%) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (33.3%)" "GO:0006396 (20%) GO:0032259 (20%)" GO:0005829 (20%) "GO:0003723 (20%) GO:0008173 (20%)" "RNA processing (20%) methylation (20%)" cytosol (20%) "RNA binding (20%) RNA methyltransferase activity (20%)" "IPR001537 (16.7%) IPR004441 (16.7%) IPR013123 (16.7%)" "tRNA/rRNA methyltransferase, SpoU type (16.7%) RNA methyltransferase TrmH (16.7%) RNA 2-O ribose methyltransferase, substrate binding (16.7%)" VTVAYGAVDPATLTAAAGAAPAQAAAPAPVGEGKDVLSPLEGK Phocaeicola sartorii Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola sartorii GO:0004736 (100%) pyruvate carboxylase activity (100%) "IPR000089 (14.3%) IPR000891 (14.3%) IPR001882 (14.3%)" "Biotin/lipoyl attachment (14.3%) Pyruvate carboxyltransferase (14.3%) Biotin-binding site (14.3%)" GEGDARPESYWYDSSLYYDELVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006508 (33.3%) GO:0005829 (33.3%) GO:0008237 (33.3%) proteolysis (33.3%) cytosol (33.3%) metallopeptidase activity (33.3%) "IPR002510 (16.7%) IPR035068 (16.7%) IPR036059 (16.7%)" "Metalloprotease TldD/E, N-terminal domain (16.7%) Metalloprotease TldD/PmbA, N-terminal (16.7%) Metalloprotease TldD/PmbA superfamily (16.7%)" WTCDGSPEFTLEEVEKADR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005737 (15.5%) "GO:0005524 (19.8%) GO:0016887 (19.8%) GO:0051082 (19.8%)" cytoplasm (15.5%) "ATP binding (19.8%) ATP hydrolysis activity (19.8%) unfolded protein binding (19.8%)" "IPR001404 (16.8%) IPR019805 (16.8%) IPR020568 (16.8%)" "Heat shock protein Hsp90 family (16.8%) Heat shock protein Hsp90, conserved site (16.8%) Ribosomal protein uS5 domain 2-type superfamily (16.8%)" NTVVIMTSNLGSDLIQER root 3.6.1.15 (100%) nucleoside-triphosphate phosphatase (100%) "GO:0034605 (16.9%) GO:0042026 (15.8%) GO:0006508 (0.5%)" "GO:0005829 (15.4%) GO:0005737 (1.6%) GO:0005759 (0%)" "GO:0005524 (17%) GO:0016887 (16.9%) GO:0042802 (15.4%)" "cellular response to heat (16.9%) protein refolding (15.8%) proteolysis (0.5%)" "cytosol (15.4%) cytoplasm (1.6%) mitochondrial matrix (0%)" "ATP binding (17%) ATP hydrolysis activity (16.9%) identical protein binding (15.4%)" "IPR003959 (8.6%) IPR027417 (8.6%) IPR050130 (8.6%)" "ATPase, AAA-type, core (8.6%) P-loop containing nucleoside triphosphate hydrolase (8.6%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%)" GVHVYHLNIGQPDLPTPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.1 (100%) aspartate transaminase (100%) GO:0006520 (33.3%) "GO:0030170 (33.3%) GO:0008483 (25%) GO:0004069 (8.3%)" amino acid metabolic process (33.3%) "pyridoxal phosphate binding (33.3%) transaminase activity (25%) L-aspartate:2-oxoglutarate aminotransferase activity (8.3%)" "IPR004839 (20%) IPR015421 (20%) IPR015422 (20%)" "Aminotransferase, class I/classII, large domain (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" MVPCSVYLEGEYGESDLCIGVPVILGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25%) GO:0006099 (25%)" "GO:0004459 (25%) GO:0030060 (25%)" "lactate metabolic process (25%) tricarboxylic acid cycle (25%)" "L-lactate dehydrogenase (NAD+) activity (25%) L-malate dehydrogenase (NAD+) activity (25%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR011275 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 3 (16.7%)" VLMDHPTLFNAALWAAPVVNHLPR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (33.3%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (33.3%)" "IPR003741 (12.5%) IPR004452 (12.5%) IPR009051 (12.5%)" "LUD domain (12.5%) L-lactate oxidation iron-sulfur protein LutB/LldF (12.5%) Alpha-helical ferredoxin (12.5%)" SLVTFIYVGKPTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015031 (33.3%) GO:0005886 (33.3%) GO:0022857 (33.3%) protein transport (33.3%) plasma membrane (33.3%) transmembrane transporter activity (33.3%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) GLKLEQATIEMLGTADKVTVSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (16.8%) GO:0009408 (0.3%) GO:0051085 (0.3%)" "GO:0005737 (15.8%) GO:1990220 (0.3%)" "GO:0005524 (16.8%) GO:0016853 (16.8%) GO:0140662 (16.8%)" "protein refolding (16.8%) response to heat (0.3%) obsolete chaperone cofactor-dependent protein refolding (0.3%)" "cytoplasm (15.8%) GroEL-GroES complex (0.3%)" "ATP binding (16.8%) isomerase activity (16.8%) ATP-dependent protein folding chaperone (16.8%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR027409 (16.8%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like apical domain superfamily (16.8%)" TAPGANDTLTDDAALK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0016884 (93.3%) GO:0016740 (6.7%)" "carbon-nitrogen ligase activity, with glutamine as amido-N-donor (93.3%) transferase activity (6.7%)" "IPR003789 (25%) IPR019004 (25%) IPR023168 (25%)" "Aspartyl/glutamyl-tRNA amidotransferase subunit B-like (25%) Uncharacterised protein YqeY/Aim41 (25%) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 (25%)" VYAVNFDGTLVDPDGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae NPQGGIVKQEAPIHISNLNPVDPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (19.1%) GO:0003723 (0.9%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (19.1%) RNA binding (0.9%)" "IPR003256 (17.1%) IPR008991 (17.1%) IPR014722 (17.1%)" "Large ribosomal subunit protein uL24 (17.1%) Translation protein SH3-like domain superfamily (17.1%) Large ribosomal subunit protein uL2, domain 2 (17.1%)" VEDGILADVAPSILHILGLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" QQGVAGYDSWGSRPEPAYTLPANR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.7%) IPR006101 (7.7%) IPR006102 (7.7%)" "Beta galactosidase small chain/ domain 5 (7.7%) Glycoside hydrolase, family 2 (7.7%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.7%)" LGCQSGIILTASHNPK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "5.4.2.2 (78.9%) 5.4.2.- (15.8%) 1.1.1.133 (2.6%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (78.9%) Phosphotransferases (phosphomutases) (15.8%) dTDP-4-dehydrorhamnose reductase (2.6%)" "GO:0005975 (23.9%) GO:0006166 (23.9%)" "GO:0000287 (23.9%) GO:0008973 (23.9%) GO:0004614 (4.2%)" "carbohydrate metabolic process (23.9%) purine ribonucleoside salvage (23.9%)" "magnesium ion binding (23.9%) phosphopentomutase activity (23.9%) phosphoglucomutase activity (4.2%)" "IPR005844 (12.8%) IPR016055 (12.8%) IPR016066 (12.8%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.8%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (12.8%) Alpha-D-phosphohexomutase, conserved site (12.8%)" NSQGELVGFDIDLAKELCKR Bacteria Bacteria 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (48.4%) GO:1903810 (0.5%)" "GO:0030288 (49.3%) GO:0016020 (0.5%) GO:0055052 (0.5%)" "GO:0016597 (0.5%) GO:0016787 (0.5%)" "amino acid transport (48.4%) L-histidine import across plasma membrane (0.5%)" "outer membrane-bounded periplasmic space (49.3%) membrane (0.5%) ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing (0.5%)" "amino acid binding (0.5%) hydrolase activity (0.5%)" "IPR001638 (34.8%) IPR018313 (34.8%) IPR005768 (30.4%)" "Solute-binding protein family 3/N-terminal domain of MltF (34.8%) Solute-binding protein family 3, conserved site (34.8%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (30.4%)" FMHFINGFNQIFINSEDQVISEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (30.8%) GO:0006044 (30.8%)" "GO:0004342 (30.8%) GO:0016853 (7.7%)" "carbohydrate metabolic process (30.8%) N-acetylglucosamine metabolic process (30.8%)" "glucosamine-6-phosphate deaminase activity (30.8%) isomerase activity (7.7%)" "IPR003737 (14.3%) IPR004547 (14.3%) IPR006148 (14.3%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.3%) Glucosamine-6-phosphate isomerase (14.3%) Glucosamine/galactosamine-6-phosphate isomerase (14.3%)" YKKEEPAPIHSAQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR025150 (50%) IPR053850 (50%)" "Glycoside hydrolase 123, catalytic domain (50%) Glycoside hydrolase 123, N-terminal domain (50%)" NVSVVDLTVR root "1.2.1.12 (73.8%) 1.2.1.- (26%) 1.1.99.24 (0%)" "glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (73.8%) With NAD(+) or NADP(+) as acceptor (26%) hydroxyacid-oxoacid transhydrogenase (0%)" "GO:0006096 (20.1%) GO:0006006 (5.7%) GO:0006915 (2.2%)" "GO:0005829 (19.9%) GO:0005634 (2.2%) GO:0005856 (2.2%)" "GO:0004365 (21.5%) GO:0051287 (14.7%) GO:0050661 (5.7%)" "glycolytic process (20.1%) glucose metabolic process (5.7%) apoptotic process (2.2%)" "cytosol (19.9%) nucleus (2.2%) cytoskeleton (2.2%)" "glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (21.5%) NAD binding (14.7%) NADP binding (5.7%)" "IPR020829 (20.9%) IPR020831 (20.9%) IPR020830 (19.7%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (20.9%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (20.9%) Glyceraldehyde 3-phosphate dehydrogenase, active site (19.7%)" VLCVTALGHTVAEAQKR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0009113 (20.2%) GO:0006189 (18.6%) GO:0006164 (1.2%)" "GO:0004637 (20.2%) GO:0005524 (19.7%) GO:0046872 (18.6%)" "purine nucleobase biosynthetic process (20.2%) 'de novo' IMP biosynthetic process (18.6%) purine nucleotide biosynthetic process (1.2%)" "phosphoribosylamine-glycine ligase activity (20.2%) ATP binding (19.7%) metal ion binding (18.6%)" "IPR000115 (10.5%) IPR011054 (10.5%) IPR020560 (10.5%)" "Phosphoribosylglycinamide synthetase (10.5%) Rudiment single hybrid motif (10.5%) Phosphoribosylglycinamide synthetase, C-domain (10.5%)" YGSYSTNRLDKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.-.- (100%) Acting on peptide bonds (peptidases) (100%) GO:0006508 (33.3%) GO:0005829 (33.3%) GO:0008237 (33.3%) proteolysis (33.3%) cytosol (33.3%) metallopeptidase activity (33.3%) "IPR002510 (16.7%) IPR035068 (16.7%) IPR036059 (16.7%)" "Metalloprotease TldD/E, N-terminal domain (16.7%) Metalloprotease TldD/PmbA, N-terminal (16.7%) Metalloprotease TldD/PmbA superfamily (16.7%)" NVVLPTSASLDAVNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.-.- (100%) Glycosylases (100%) "GO:0008932 (82.4%) GO:0016798 (17.6%)" "lytic endotransglycosylase activity (82.4%) hydrolase activity, acting on glycosyl bonds (17.6%)" "IPR018392 (33.3%) IPR028082 (33.3%) IPR036779 (33.3%)" "LysM domain (33.3%) Periplasmic binding protein-like I (33.3%) LysM domain superfamily (33.3%)" TISYAESHDQALVGDKTIIFR Bacteria Bacteria "2.4.1.18 (99.6%) 3.2.1.- (0.4%)" "1,4-alpha-glucan branching enzyme (99.6%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (0.4%)" "GO:0005978 (19.3%) GO:0006508 (1.4%) GO:0005975 (0.4%)" "GO:0005737 (19.5%) GO:0016020 (0.1%)" "GO:0003844 (19.5%) GO:0043169 (19.3%) GO:0004553 (19.1%)" "glycogen biosynthetic process (19.3%) proteolysis (1.4%) carbohydrate metabolic process (0.4%)" "cytoplasm (19.5%) membrane (0.1%)" "1,4-alpha-glucan branching enzyme activity (19.5%) cation binding (19.3%) hydrolase activity, hydrolyzing O-glycosyl compounds (19.1%)" "IPR017853 (12.7%) IPR006047 (12.5%) IPR006048 (12.5%)" "Glycoside hydrolase superfamily (12.7%) Glycosyl hydrolase family 13, catalytic domain (12.5%) Alpha-amylase/branching enzyme, C-terminal all beta (12.5%)" YHGDSSFSPGGSFYDIMFCMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006508 (20%) GO:0009636 (20%) GO:0043418 (20%)" GO:0005737 (20%) GO:0070005 (20%) "proteolysis (20%) response to toxic substance (20%) homocysteine catabolic process (20%)" cytoplasm (20%) cysteine-type aminopeptidase activity (20%) "IPR004134 (50%) IPR038765 (50%)" "Peptidase C1B, bleomycin hydrolase (50%) Papain-like cysteine peptidase superfamily (50%)" GLVQTTRPLPYGGVMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.21.- (80%) 3.4.21.102 (20%)" "Serine endopeptidases (80%) C-terminal processing peptidase (20%)" "GO:0006508 (20.5%) GO:0007165 (20.5%)" GO:0030288 (20.5%) "GO:0004175 (18.1%) GO:0008236 (18.1%) GO:0004252 (2.4%)" "proteolysis (20.5%) signal transduction (20.5%)" outer membrane-bounded periplasmic space (20.5%) "endopeptidase activity (18.1%) serine-type peptidase activity (18.1%) serine-type endopeptidase activity (2.4%)" "IPR001478 (16.7%) IPR004447 (16.7%) IPR005151 (16.7%)" "PDZ domain (16.7%) C-terminal-processing peptidase S41A (16.7%) Tail specific protease (16.7%)" EISAQTVLKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "2.1.3.11 (90%) 2.1.3.9 (10%)" "N-succinylornithine carbamoyltransferase (90%) N-acetylornithine carbamoyltransferase (10%)" "GO:0019240 (25%) GO:0042450 (25%)" "GO:0004585 (25%) GO:0016597 (25%)" "citrulline biosynthetic process (25%) L-arginine biosynthetic process via ornithine (25%)" "ornithine carbamoyltransferase activity (25%) amino acid binding (25%)" "IPR006130 (20%) IPR006131 (20%) IPR006132 (20%)" "Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20%)" GSVMNPCDHPHGGGEGR root "GO:0032543 (11%) GO:0002181 (4.8%) GO:0006412 (2%)" "GO:0005762 (11%) GO:0009507 (10.7%) GO:0015934 (6.7%)" "GO:0003735 (17.7%) GO:0016740 (17.7%) GO:0019843 (14.4%)" "mitochondrial translation (11%) cytoplasmic translation (4.8%) translation (2%)" "mitochondrial large ribosomal subunit (11%) chloroplast (10.7%) large ribosomal subunit (6.7%)" "structural constituent of ribosome (17.7%) transferase activity (17.7%) rRNA binding (14.4%)" "IPR002171 (11.2%) IPR005880 (11.2%) IPR022666 (11.2%)" "Large ribosomal subunit protein uL2 (11.2%) Large ribosomal subunit protein uL2, bacteria/organella (11.2%) Large ribosomal subunit protein uL2, RNA-binding domain (11.2%)" TRKDHPQVMNAAVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (32%) GO:1902600 (32%) GO:0006811 (1.3%)" "GO:0005524 (33.3%) GO:0016787 (1.3%)" "ATP metabolic process (32%) proton transmembrane transport (32%) monoatomic ion transport (1.3%)" "ATP binding (33.3%) hydrolase activity (1.3%)" "IPR000194 (20.2%) IPR022879 (20.2%) IPR027417 (20.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.2%) V-type ATP synthase regulatory subunit B/beta (20.2%) P-loop containing nucleoside triphosphate hydrolase (20.2%)" YAACVTQITEAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.3.99.- (100%) With other acceptors (100%) "GO:0050660 (50%) GO:0003995 (47.1%) GO:0016937 (2.9%)" "flavin adenine dinucleotide binding (50%) acyl-CoA dehydrogenase activity (47.1%) short-chain fatty acyl-CoA dehydrogenase activity (2.9%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009075 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.1%)" NADPADDASAREVINNLFFSEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (19.9%) GO:0000428 (20.1%) "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (19.9%)" DNA-templated transcription (19.9%) DNA-directed RNA polymerase complex (20.1%) "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (19.9%)" "IPR007642 (7.9%) IPR015712 (7.9%) IPR037034 (7.8%)" "RNA polymerase Rpb2, domain 2 (7.9%) DNA-directed RNA polymerase, subunit 2 (7.9%) RNA polymerase Rpb2, domain 2 superfamily (7.8%)" TAEDYLGEPVTEAVITVPAYFNDAQR root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0051301 (0.2%) GO:0006260 (0.1%) GO:0042026 (0.1%)" "GO:0005737 (0.5%) GO:0005829 (0.1%) GO:0070013 (0.1%)" "GO:0005524 (26.4%) GO:0140662 (26.4%) GO:0051082 (25.3%)" "cell division (0.2%) DNA replication (0.1%) protein refolding (0.1%)" "cytoplasm (0.5%) cytosol (0.1%) intracellular organelle lumen (0.1%)" "ATP binding (26.4%) ATP-dependent protein folding chaperone (26.4%) unfolded protein binding (25.3%)" "IPR013126 (17%) IPR043129 (17%) IPR018181 (17%)" "Heat shock protein 70 family (17%) ATPase, nucleotide binding domain (17%) Heat shock protein 70, conserved site (17%)" AREIWFLCR root 4.1.3.36 (100%) 1,4-dihydroxy-2-naphthoyl-CoA synthase (100%) "GO:0009234 (31%) GO:0042372 (3.1%) GO:0006631 (0.4%)" "GO:0005829 (30.4%) GO:0016020 (0.4%) GO:0009536 (0.1%)" "GO:0008935 (31%) GO:0016853 (2.6%) GO:0018812 (0.3%)" "menaquinone biosynthetic process (31%) phylloquinone biosynthetic process (3.1%) fatty acid metabolic process (0.4%)" "cytosol (30.4%) membrane (0.4%) plastid (0.1%)" "1,4-dihydroxy-2-naphthoyl-CoA synthase activity (31%) isomerase activity (2.6%) 3-hydroxyacyl-CoA dehydratase activity (0.3%)" "IPR001753 (20.1%) IPR029045 (20.1%) IPR014748 (19.9%)" "Enoyl-CoA hydratase/isomerase (20.1%) ClpP/crotonase-like domain superfamily (20.1%) Enoyl-CoA hydratase, C-terminal (19.9%)" VNTISQSPTMTTAGSGVK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" YEIHHHVQITDPAIVAAATLSHR root "GO:0034605 (16.8%) GO:0042026 (15.7%) GO:0006508 (1%)" "GO:0005829 (14.8%) GO:0005737 (2%) GO:0005759 (0%)" "GO:0005524 (16.8%) GO:0016887 (16.8%) GO:0042802 (14.8%)" "cellular response to heat (16.8%) protein refolding (15.7%) proteolysis (1%)" "cytosol (14.8%) cytoplasm (2%) mitochondrial matrix (0%)" "ATP binding (16.8%) ATP hydrolysis activity (16.8%) identical protein binding (14.8%)" "IPR027417 (8.6%) IPR041546 (8.6%) IPR050130 (8.6%)" "P-loop containing nucleoside triphosphate hydrolase (8.6%) ClpA/ClpB, AAA lid domain (8.6%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%)" FASTHTDSSAQTVSLEDYVSR root "GO:0006457 (0.1%) GO:0006974 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (19.6%) GO:0005829 (0.1%) GO:0005886 (0%)" "GO:0005524 (19.9%) GO:0016887 (19.9%) GO:0051082 (19.9%)" "protein folding (0.1%) DNA damage response (0.1%) response to heat (0.1%)" "cytoplasm (19.6%) cytosol (0.1%) plasma membrane (0%)" "ATP binding (19.9%) ATP hydrolysis activity (19.9%) unfolded protein binding (19.9%)" "IPR001404 (14.6%) IPR020568 (14.6%) IPR037196 (14.5%)" "Heat shock protein Hsp90 family (14.6%) Ribosomal protein uS5 domain 2-type superfamily (14.6%) HSP90, C-terminal domain (14.5%)" QYDDAVAIFNK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) SCIDSGFSSVMIDGSHLPYDENVALTK Pseudomonadati Bacteria Pseudomonadati 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (25%) GO:0030388 (25%)" "GO:0004332 (25%) GO:0008270 (25%)" "glycolytic process (25%) fructose 1,6-bisphosphate metabolic process (25%)" "fructose-bisphosphate aldolase activity (25%) zinc ion binding (25%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" ELISNASDAADKLR root "GO:0006457 (0%) GO:0006974 (0%) GO:0009408 (0%)" "GO:0005737 (19.8%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0005524 (20%) GO:0016887 (20%) GO:0051082 (20%)" "protein folding (0%) DNA damage response (0%) response to heat (0%)" "cytoplasm (19.8%) cytosol (0%) plasma membrane (0%)" "ATP binding (20%) ATP hydrolysis activity (20%) unfolded protein binding (20%)" "IPR001404 (14.5%) IPR020575 (14.5%) IPR036890 (14.5%)" "Heat shock protein Hsp90 family (14.5%) Heat shock protein Hsp90, N-terminal (14.5%) Histidine kinase/HSP90-like ATPase superfamily (14.5%)" DAEAMAEQLKDVTLTIATK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000244 (14.3%) IPR009027 (14.3%) IPR020069 (14.3%)" "Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.3%) Large ribosomal subunit protein bL9, C-terminal (14.3%)" FSESVLLNKEVLDAFIACNDLAPLHNPANLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" GLTKEEAEAQSTLMAEAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.19 (100%) arginine--tRNA ligase (100%) GO:0006420 (25%) GO:0005737 (25%) "GO:0004814 (25%) GO:0005524 (25%)" arginyl-tRNA aminoacylation (25%) cytoplasm (25%) "arginine-tRNA ligase activity (25%) ATP binding (25%)" "IPR001278 (12.5%) IPR001412 (12.5%) IPR005148 (12.5%)" "Arginine-tRNA ligase (12.5%) Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Arginyl tRNA synthetase N-terminal domain (12.5%)" TGNTLDGKDCENR LSYDTEASIAK root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (24.9%) GO:0006098 (24.8%) GO:0009052 (0.1%)" "GO:0005829 (24.9%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0004801 (24.9%) GO:0016740 (0.3%) GO:0016744 (0%)" "carbohydrate metabolic process (24.9%) pentose-phosphate shunt (24.8%) pentose-phosphate shunt, non-oxidative branch (0.1%)" "cytosol (24.9%) cytoplasm (0%) membrane (0%)" "transaldolase activity (24.9%) transferase activity (0.3%) transketolase or transaldolase activity (0%)" "IPR001585 (25.1%) IPR013785 (25.1%) IPR018225 (25.1%)" "Transaldolase/Fructose-6-phosphate aldolase (25.1%) Aldolase-type TIM barrel (25.1%) Transaldolase, active site (25.1%)" LGVPVQFAPDCAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%)" GO:0005829 (16.5%) "GO:0004618 (16.5%) GO:0005524 (16.5%) GO:0043531 (16.5%)" "gluconeogenesis (16.5%) glycolytic process (16.5%)" cytosol (16.5%) "phosphoglycerate kinase activity (16.5%) ATP binding (16.5%) ADP binding (16.5%)" "IPR001576 (32.7%) IPR015824 (32.7%) IPR036043 (32.7%)" "Phosphoglycerate kinase (32.7%) Phosphoglycerate kinase, N-terminal (32.7%) Phosphoglycerate kinase superfamily (32.7%)" EHLSQEVLGKR root 2.7.13.3 (100%) histidine kinase (100%) "GO:0006355 (20.1%) GO:0000160 (0.4%) GO:0007155 (0%)" "GO:0005829 (19.7%) GO:0032993 (19.7%) GO:0005737 (0%)" "GO:0000156 (19.7%) GO:0000976 (19.7%) GO:0003677 (0.4%)" "regulation of DNA-templated transcription (20.1%) phosphorelay signal transduction system (0.4%) cell adhesion (0%)" "cytosol (19.7%) protein-DNA complex (19.7%) cytoplasm (0%)" "phosphorelay response regulator activity (19.7%) transcription cis-regulatory region binding (19.7%) DNA binding (0.4%)" "IPR001867 (19.9%) IPR036388 (19.9%) IPR039420 (19.6%)" "OmpR/PhoB-type DNA-binding domain (19.9%) Winged helix-like DNA-binding domain superfamily (19.9%) Transcriptional regulatory protein WalR-like (19.6%)" IVDSQAHLEPATR root "2.1.1.200 (99.2%) 2.1.1.- (0.8%)" "tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (99.2%) Methyltransferases (0.8%)" "GO:0002128 (24.9%) GO:0032259 (0.3%)" GO:0005829 (24.9%) "GO:0003723 (24.9%) GO:0160206 (21.3%) GO:0008173 (3.6%)" "tRNA nucleoside ribose methylation (24.9%) methylation (0.3%)" cytosol (24.9%) "RNA binding (24.9%) tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase activity (21.3%) RNA methyltransferase activity (3.6%)" "IPR029026 (25.1%) IPR001537 (25%) IPR004384 (25%)" "tRNA (guanine-N1-)-methyltransferase, N-terminal (25.1%) tRNA/rRNA methyltransferase, SpoU type (25%) RNA methyltransferase TrmJ/LasT (25%)" AGDIAAAIGLKDVTTGDTLCDPDAPIILER Bacteria Bacteria 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0032790 (17.2%) GO:0006412 (0.1%) GO:0006414 (0.1%)" "GO:0005737 (14.6%) GO:0005829 (0.1%)" "GO:0003746 (17.8%) GO:0005525 (17.2%) GO:0003924 (16.1%)" "ribosome disassembly (17.2%) translation (0.1%) translational elongation (0.1%)" "cytoplasm (14.6%) cytosol (0.1%)" "translation elongation factor activity (17.8%) GTP binding (17.2%) GTPase activity (16.1%)" "IPR009000 (6.7%) IPR004161 (6.6%) IPR035647 (6.6%)" "Translation protein, beta-barrel domain superfamily (6.7%) Translation elongation factor EFTu-like, domain 2 (6.6%) EF-G domain III/V-like (6.6%)" KILSLASSHNDEVTVAMMSDYLKEQEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0008199 (43.3%) GO:0016722 (43.3%) GO:0003677 (13.3%)" "ferric iron binding (43.3%) oxidoreductase activity, acting on metal ions (43.3%) DNA binding (13.3%)" "IPR002177 (20%) IPR008331 (20%) IPR009078 (20%)" "DNA-binding protein Dps (20%) Ferritin/DPS domain (20%) Ferritin-like superfamily (20%)" NYNSVIPQENPFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.7 (100%) DNA-directed DNA polymerase (100%) GO:0006271 (16.7%) "GO:0005737 (16.7%) GO:0009360 (16.7%)" "GO:0003677 (16.7%) GO:0003887 (16.7%) GO:0008408 (16.7%)" DNA strand elongation involved in DNA replication (16.7%) "cytoplasm (16.7%) DNA polymerase III complex (16.7%)" "DNA binding (16.7%) DNA-directed DNA polymerase activity (16.7%) 3'-5' exonuclease activity (16.7%)" "IPR001001 (20%) IPR022634 (20%) IPR022635 (20%)" "DNA polymerase III, beta sliding clamp (20%) DNA polymerase III, beta sliding clamp, N-terminal (20%) DNA polymerase III, beta sliding clamp, C-terminal (20%)" YLAKNELIVNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) TVNLHYGDMTDSSSLIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.47 (100%) GDP-mannose 4,6-dehydratase (100%) GO:0042351 (33.3%) "GO:0008446 (33.3%) GO:0070401 (33.3%)" 'de novo' GDP-L-fucose biosynthetic process (33.3%) "GDP-mannose 4,6-dehydratase activity (33.3%) NADP+ binding (33.3%)" "IPR006368 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "GDP-mannose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" VKEIESVTNHDVK Pseudomonadati Bacteria Pseudomonadati 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (22.6%) GO:0044208 (22.6%) GO:0006188 (6.9%)" "GO:0004018 (29.6%) GO:0070626 (18.2%)" "'de novo' IMP biosynthetic process (22.6%) 'de novo' AMP biosynthetic process (22.6%) IMP biosynthetic process (6.9%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (29.6%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (18.2%)" "IPR000362 (12.5%) IPR004769 (12.5%) IPR008948 (12.5%)" "Fumarate lyase family (12.5%) Adenylosuccinate lyase (12.5%) L-Aspartase-like (12.5%)" FSSGMSSLNDEQTNQVKDEVWR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR027304 (33.3%) IPR046357 (33.3%) IPR052029 (33.3%)" "Trigger factor/SurA domain superfamily (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) Periplasmic chaperone PpiD (33.3%)" PELQIVAFKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0005737 (48.5%) GO:0003746 (51.5%) cytoplasm (48.5%) translation elongation factor activity (51.5%) "IPR001816 (20.5%) IPR014039 (20.5%) IPR036402 (20.5%)" "Translation elongation factor EFTs/EF1B (20.5%) Translation elongation factor EFTs/EF1B, dimerisation (20.5%) Elongation factor Ts, dimerisation domain superfamily (20.5%)" QDPLLVPLFTLIR root "GO:0051604 (20%) GO:0006974 (10%) GO:0071978 (10%)" "GO:0005737 (20%) GO:0005829 (20%)" "GO:0008270 (10%) GO:0042578 (10%)" "protein maturation (20%) DNA damage response (10%) bacterial-type flagellum-dependent swarming motility (10%)" "cytoplasm (20%) cytosol (20%)" "zinc ion binding (10%) phosphoric ester hydrolase activity (10%)" "IPR036411 (25.3%) IPR050289 (25.1%) IPR020945 (24.9%)" "TorD-like superfamily (25.3%) TorD/DmsD family chaperones (25.1%) DMSO/Nitrate reductase chaperone (24.9%)" TTPFTDVHIALGAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (16.1%) GO:0032259 (8.8%) GO:0006546 (0.4%)" "GO:0005829 (16.5%) GO:0005960 (16.5%)" "GO:0004047 (16.5%) GO:0008483 (16.5%) GO:0008168 (8.8%)" "glycine decarboxylation via glycine cleavage system (16.1%) methylation (8.8%) glycine catabolic process (0.4%)" "cytosol (16.5%) glycine cleavage complex (16.5%)" "aminomethyltransferase activity (16.5%) transaminase activity (16.5%) methyltransferase activity (8.8%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" INDLGFISTPYR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (18.3%) GO:0006508 (4.3%)" GO:0000428 (18.3%) "GO:0003677 (18.3%) GO:0003899 (18.3%) GO:0032549 (18.3%)" "DNA-templated transcription (18.3%) proteolysis (4.3%)" DNA-directed RNA polymerase complex (18.3%) "DNA binding (18.3%) DNA-directed RNA polymerase activity (18.3%) ribonucleoside binding (18.3%)" "IPR007120 (7.6%) IPR007121 (7.6%) IPR007641 (7.6%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.6%) RNA polymerase, beta subunit, conserved site (7.6%) RNA polymerase Rpb2, domain 7 (7.6%)" STGIADTVLFGPEPEFFLFDDIR root 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (14.5%) GO:0019740 (14.5%) GO:0009314 (0.1%)" "GO:0005737 (14.5%) GO:0016020 (14.5%) GO:0005829 (0.1%)" "GO:0004356 (14.6%) GO:0005524 (13.6%) GO:0046872 (13.3%)" "glutamine biosynthetic process (14.5%) nitrogen utilization (14.5%) response to radiation (0.1%)" "cytoplasm (14.5%) membrane (14.5%) cytosol (0.1%)" "glutamine synthetase activity (14.6%) ATP binding (13.6%) metal ion binding (13.3%)" "IPR008146 (13%) IPR014746 (13%) IPR036651 (12.8%)" "Glutamine synthetase, catalytic domain (13%) Glutamine synthetase/guanido kinase, catalytic domain (13%) Glutamine synthetase, N-terminal domain superfamily (12.8%)" RSHDALTAVTSLSVDKTSGEK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006412 (32.7%) GO:0000027 (0.1%) GO:0000302 (0.1%)" "GO:0015934 (32.7%) GO:0005840 (1.1%) GO:0022625 (0.2%)" GO:0003735 (32.8%) "translation (32.7%) ribosomal large subunit assembly (0.1%) response to reactive oxygen species (0.1%)" "large ribosomal subunit (32.7%) ribosome (1.1%) cytosolic large ribosomal subunit (0.2%)" structural constituent of ribosome (32.8%) "IPR002677 (33.3%) IPR011332 (33.3%) IPR044957 (33.3%)" "Large ribosomal subunit protein bL32 (33.3%) Zinc-binding ribosomal protein (33.3%) Large ribosomal subunit protein bL32, bacteria (33.3%)" ILYDRTEEEEFVSFEPALKEYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007645 (8.7%) IPR010243 (8.7%) IPR015712 (8.7%)" "RNA polymerase Rpb2, domain 3 (8.7%) DNA-directed RNA polymerase beta subunit, bacterial-type (8.7%) DNA-directed RNA polymerase, subunit 2 (8.7%)" ALSGDKPICGICMGNQLLAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006207 (15.8%) GO:0006526 (15.8%) GO:0006541 (15.8%)" "GO:0004088 (15.8%) GO:0005524 (15.8%) GO:0004359 (5.1%)" "'de novo' pyrimidine nucleobase biosynthetic process (15.8%) L-arginine biosynthetic process (15.8%) glutamine metabolic process (15.8%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (15.8%) ATP binding (15.8%) glutaminase activity (5.1%)" "IPR002474 (14.3%) IPR006274 (14.3%) IPR017926 (14.3%)" "Carbamoyl-phosphate synthase small subunit, N-terminal domain (14.3%) Carbamoyl-phosphate synthase, small subunit (14.3%) Glutamine amidotransferase (14.3%)" SSSLYDMIPAKPQNAKPFGEWNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016787 (100%) hydrolase activity (100%) IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) AIKDADIVILAVKPWLIDQVLSVVHLTPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.5.1.2 (100%) pyrroline-5-carboxylate reductase (100%) GO:0055129 (33.3%) GO:0005737 (33.3%) GO:0004735 (33.3%) L-proline biosynthetic process (33.3%) cytoplasm (33.3%) pyrroline-5-carboxylate reductase activity (33.3%) "IPR000304 (20%) IPR008927 (20%) IPR028939 (20%)" "Pyrroline-5-carboxylate reductase-like (20%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (20%) Pyrroline-5-carboxylate reductase, catalytic, N-terminal (20%)" GLFLIDKEGLIR root "1.11.1.24 (96.8%) 1.11.1.15 (3.2%)" "thioredoxin-dependent peroxiredoxin (96.8%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (3.2%)" "GO:0006979 (15.2%) GO:0042744 (15.2%) GO:0045454 (15.2%)" "GO:0005829 (14.8%) GO:0005739 (5.1%)" GO:0008379 (15.2%) "response to oxidative stress (15.2%) hydrogen peroxide catabolic process (15.2%) cell redox homeostasis (15.2%)" "cytosol (14.8%) mitochondrion (5.1%)" thioredoxin peroxidase activity (15.2%) "IPR000866 (17.6%) IPR019479 (17.6%) IPR036249 (17.6%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (17.6%) Peroxiredoxin, C-terminal (17.6%) Thioredoxin-like superfamily (17.6%)" TPNVSVVDLTVRLEK root "1.2.1.12 (60.2%) 1.2.1.- (39.7%) 1.2.1.13 (0.1%)" "glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (60.2%) With NAD(+) or NADP(+) as acceptor (39.7%) glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) (0.1%)" "GO:0006006 (11.8%) GO:0006096 (8%) GO:0006915 (6.8%)" "GO:0005829 (7.7%) GO:0005856 (6.8%) GO:0005634 (6.8%)" "GO:0051287 (12.9%) GO:0004365 (12.6%) GO:0050661 (11.8%)" "glucose metabolic process (11.8%) glycolytic process (8%) apoptotic process (6.8%)" "cytosol (7.7%) cytoskeleton (6.8%) nucleus (6.8%)" "NAD binding (12.9%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (12.6%) NADP binding (11.8%)" "IPR020829 (17.9%) IPR020831 (17.9%) IPR036291 (16.6%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.9%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.9%) NAD(P)-binding domain superfamily (16.6%)" NPIIISSSSLTNSAEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.3.1.1 (75%) 1.3.98.1 (25%)" "dihydrouracil dehydrogenase (NAD(+)) (75%) dihydroorotate oxidase (fumarate) (25%)" "GO:0006207 (23.9%) GO:0044205 (21.7%) GO:0006222 (2.2%)" GO:0005737 (23.9%) "GO:0004152 (20.7%) GO:0004159 (4.3%) GO:1990663 (3.3%)" "'de novo' pyrimidine nucleobase biosynthetic process (23.9%) 'de novo' UMP biosynthetic process (21.7%) UMP biosynthetic process (2.2%)" cytoplasm (23.9%) "dihydroorotate dehydrogenase activity (20.7%) dihydropyrimidine dehydrogenase (NAD+) activity (4.3%) dihydroorotate dehydrogenase (fumarate) activity (3.3%)" "IPR005720 (25%) IPR012135 (25%) IPR013785 (25%)" "Dihydroorotate dehydrogenase, catalytic (25%) Dihydroorotate dehydrogenase, class 1/ 2 (25%) Aldolase-type TIM barrel (25%)" SAAVSGLLSQNQLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033103 (50%) GO:0033104 (50%) protein secretion by the type VI secretion system (50%) type VI protein secretion system complex (50%) IPR035576 (100%) Type VI secretion system TssC (100%) KVEERELPELTAEFIKR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.6%) GO:0051301 (12.4%) GO:0043335 (11.3%)" "GO:0005737 (12.3%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0003755 (12.7%) GO:0043022 (11.3%) GO:0044183 (11.3%)" "protein transport (12.6%) cell division (12.4%) protein unfolding (11.3%)" "cytoplasm (12.3%) cytosol (0.1%) membrane (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (12.7%) ribosome binding (11.3%) protein folding chaperone (11.3%)" "IPR037041 (13%) IPR001179 (12.8%) IPR046357 (12.7%)" "Trigger factor, C-terminal domain superfamily (13%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (12.8%) Peptidyl-prolyl cis-trans isomerase domain superfamily (12.7%)" ATILALGEMR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (16.8%) GO:0042254 (15.9%)" "GO:0005737 (16.3%) GO:0015935 (16.3%) GO:0005840 (1%)" "GO:0003735 (16.8%) GO:0019843 (16.3%)" "translation (16.8%) ribosome biogenesis (15.9%)" "cytoplasm (16.3%) small ribosomal subunit (16.3%) ribosome (1%)" "structural constituent of ribosome (16.8%) rRNA binding (16.3%)" "IPR005324 (14.5%) IPR014721 (14.5%) IPR020568 (14.5%)" "Small ribosomal subunit protein uS5, C-terminal (14.5%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (14.5%) Ribosomal protein uS5 domain 2-type superfamily (14.5%)" IKLVGVIPEDQSVLR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0051782 (16.6%) GO:0000917 (16.2%) GO:0032506 (0.1%)" "GO:0005829 (16.7%) GO:0009898 (16.7%) GO:0005886 (0%)" "GO:0005524 (16.7%) GO:0016887 (16.7%) GO:0042802 (0%)" "negative regulation of cell division (16.6%) division septum assembly (16.2%) cytokinetic process (0.1%)" "cytosol (16.7%) cytoplasmic side of plasma membrane (16.7%) plasma membrane (0%)" "ATP binding (16.7%) ATP hydrolysis activity (16.7%) identical protein binding (0%)" "IPR027417 (20.3%) IPR050625 (20.3%) IPR010223 (19.9%)" "P-loop containing nucleoside triphosphate hydrolase (20.3%) ParA/MinD ATPase (20.3%) ATP binding protein MinD (19.9%)" DFQKVDDIPEATIISEELKR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" ILEVLQEPDNHHVSAEDLYKR root "GO:1900705 (19.8%) GO:0045892 (0.7%) GO:0045893 (0%)" "GO:0005829 (19.8%) GO:0032993 (0.1%)" "GO:0000976 (19.8%) GO:0008270 (19.8%) GO:0001217 (19.1%)" "negative regulation of siderophore biosynthetic process (19.8%) negative regulation of DNA-templated transcription (0.7%) positive regulation of DNA-templated transcription (0%)" "cytosol (19.8%) protein-DNA complex (0.1%)" "transcription cis-regulatory region binding (19.8%) zinc ion binding (19.8%) DNA-binding transcription repressor activity (19.1%)" "IPR002481 (25.1%) IPR036388 (25.1%) IPR036390 (25.1%)" "Ferric-uptake regulator (25.1%) Winged helix-like DNA-binding domain superfamily (25.1%) Winged helix DNA-binding domain superfamily (25.1%)" IQSLEQIHEAAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0002949 (22.9%) GO:0005737 (22.9%) "GO:0005524 (22.9%) GO:0046872 (22.9%) GO:0016740 (4.3%)" tRNA threonylcarbamoyladenosine modification (22.9%) cytoplasm (22.9%) "ATP binding (22.9%) metal ion binding (22.9%) transferase activity (4.3%)" "IPR003442 (50%) IPR027417 (50%)" "tRNA threonylcarbamoyl adenosine modification protein TsaE (50%) P-loop containing nucleoside triphosphate hydrolase (50%)" AVGESVQKPLLYYR root "5.1.3.2 (99.5%) 5.1.3.- (0.5%)" "UDP-glucose 4-epimerase (99.5%) Acting on carbohydrates and derivatives (0.5%)" "GO:0006012 (32.4%) GO:0033499 (0.8%)" GO:0005829 (33.2%) "GO:0003978 (33.2%) GO:0003974 (0.2%) GO:0016853 (0.2%)" "galactose metabolic process (32.4%) galactose catabolic process via UDP-galactose, Leloir pathway (0.8%)" cytosol (33.2%) "UDP-glucose 4-epimerase activity (33.2%) UDP-N-acetylglucosamine 4-epimerase activity (0.2%) isomerase activity (0.2%)" "IPR005886 (33.4%) IPR036291 (33.2%) IPR016040 (19.3%)" "UDP-glucose 4-epimerase (33.4%) NAD(P)-binding domain superfamily (33.2%) NAD(P)-binding domain (19.3%)" MRLNTLSPAEGSK root "GO:0006412 (24.8%) GO:0002181 (0%)" "GO:0022625 (24.8%) GO:0005840 (0.6%) GO:1990904 (0.2%)" "GO:0003735 (24.8%) GO:0019843 (24.7%)" "translation (24.8%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.8%) ribosome (0.6%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (24.8%) rRNA binding (24.7%)" "IPR036227 (20.4%) IPR005749 (20.2%) IPR030878 (20.1%)" "Large ribosomal subunit protein uL15/eL18 superfamily (20.4%) Large ribosomal subunit protein uL15, bacteria (20.2%) Large ribosomal subunit protein uL15 (20.1%)" ITEINVAETLKDVRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20.3%) "GO:0048500 (18.6%) GO:0005786 (1.4%)" "GO:0005525 (20.3%) GO:0003924 (20%) GO:0008312 (19.2%)" SRP-dependent cotranslational protein targeting to membrane (20.3%) "signal recognition particle (18.6%) signal recognition particle, endoplasmic reticulum targeting (1.4%)" "GTP binding (20.3%) GTPase activity (20%) 7S RNA binding (19.2%)" "IPR013822 (11.4%) IPR042101 (11.4%) IPR022941 (11.2%)" "Signal recognition particle SRP54, helical bundle (11.4%) Signal recognition particle SRP54, N-terminal domain superfamily (11.4%) Signal recognition particle, SRP54 subunit (11.2%)" FRLSEYPLFIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.3%) IPR008948 (14.3%) IPR018951 (14.3%)" "Fumarate lyase family (14.3%) L-Aspartase-like (14.3%) Fumarase C, C-terminal (14.3%)" FGGAEVFIKPASTGTGVVAGGAMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (16.8%) GO:0042254 (15.8%)" "GO:0015935 (16.8%) GO:0005737 (16.3%) GO:0005840 (0.5%)" "GO:0003735 (16.8%) GO:0019843 (16.8%)" "translation (16.8%) ribosome biogenesis (15.8%)" "small ribosomal subunit (16.8%) cytoplasm (16.3%) ribosome (0.5%)" "structural constituent of ribosome (16.8%) rRNA binding (16.8%)" "IPR000851 (14.3%) IPR005324 (14.3%) IPR005712 (14.3%)" "Small ribosomal subunit protein uS5 (14.3%) Small ribosomal subunit protein uS5, C-terminal (14.3%) Small ribosomal subunit protein uS5, bacteria (14.3%)" ILSIDTEGLTAEQIRR Bacteria Bacteria GO:0005829 (100%) cytosol (100%) IPR017704 (100%) Putative selenium-binding protein YdfZ (100%) IQIVGDDLFVTNTER root 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.8%) "GO:0000015 (16.8%) GO:0005576 (16.5%) GO:0009986 (16.2%)" "GO:0000287 (16.8%) GO:0004634 (16.8%)" glycolytic process (16.8%) "phosphopyruvate hydratase complex (16.8%) extracellular region (16.5%) cell surface (16.2%)" "magnesium ion binding (16.8%) phosphopyruvate hydratase activity (16.8%)" "IPR000941 (16.8%) IPR020810 (16.8%) IPR036849 (16.8%)" "Enolase (16.8%) Enolase, C-terminal TIM barrel domain (16.8%) Enolase-like, C-terminal domain superfamily (16.8%)" HLLDVLAHIPAKN Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" SKFEIVGDPVEMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.-.-.- (100%) Oxidoreductases (100%) "GO:0010181 (25.3%) GO:0009055 (24.9%) GO:0016491 (24.9%)" "FMN binding (25.3%) electron transfer activity (24.9%) oxidoreductase activity (24.9%)" "IPR008254 (13.9%) IPR029039 (13.9%) IPR051285 (13.9%)" "Flavodoxin/nitric oxide synthase (13.9%) Flavoprotein-like superfamily (13.9%) NADH-dependent Oxidoreductase Modular Protein (13.9%)" HASTAVIADYFDADNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" SYDIAPNALSEDDPRNPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.2.11 (94.4%) 5.4.2.1 (5.6%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (94.4%) Transferred entry: 5.4.2.11 and 5.4.2.12 (5.6%)" "GO:0006094 (33.3%) GO:0006096 (33.3%)" GO:0004619 (33.3%) "gluconeogenesis (33.3%) glycolytic process (33.3%)" phosphoglycerate mutase activity (33.3%) "IPR001345 (25%) IPR005952 (25%) IPR013078 (25%)" "Phosphoglycerate/bisphosphoglycerate mutase, active site (25%) Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%)" YTGENSEPELIKEDLNYQFVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (12.3%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (12.3%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" NAFDFLQGLIAGIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051012 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Cellulose Synthase/LPS Assembly/PSI Assembly (33.3%)" FNFIKYPNSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.2%) "GO:0003746 (25.4%) GO:0005525 (25.2%) GO:0003924 (24.1%)" ribosome disassembly (25.2%) "translation elongation factor activity (25.4%) GTP binding (25.2%) GTPase activity (24.1%)" "IPR035647 (7.7%) IPR041095 (7.7%) IPR005517 (7.6%)" "EF-G domain III/V-like (7.7%) Elongation Factor G, domain II (7.7%) Translation elongation factor EFG/EF2, domain IV (7.6%)" YTGDPVPEAECLADVVK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 5.4.2.11 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (100%) "GO:0006094 (33.3%) GO:0006096 (33.3%)" GO:0004619 (33.3%) "gluconeogenesis (33.3%) glycolytic process (33.3%)" phosphoglycerate mutase activity (33.3%) "IPR001345 (25%) IPR005952 (25%) IPR013078 (25%)" "Phosphoglycerate/bisphosphoglycerate mutase, active site (25%) Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%)" VKCYGADDVREGVAIMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR025964 (100%) GGGtGRT protein (100%) AAVDAGFCDHDRQIGQTGVTVRPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033539 (33.3%) "GO:0009055 (33.3%) GO:0050660 (33.3%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (33.3%) "electron transfer activity (33.3%) flavin adenine dinucleotide binding (33.3%)" "IPR001308 (16.7%) IPR014729 (16.7%) IPR014730 (16.7%)" "Electron transfer flavoprotein alpha subunit/FixB (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.7%)" GEHMDFVPGSYAQIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "7.2.1.1 (97.6%) 1.6.5.- (2.4%)" "NADH:ubiquinone reductase (Na(+)-transporting) (97.6%) With a quinone or similar compound as acceptor (2.4%)" GO:0006814 (16.7%) "GO:0005886 (16.5%) GO:0016020 (0.2%)" "GO:0016655 (16.7%) GO:0051537 (16.7%) GO:0009055 (16.5%)" sodium ion transport (16.7%) "plasma membrane (16.5%) membrane (0.2%)" "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (16.7%) 2 iron, 2 sulfur cluster binding (16.7%) electron transfer activity (16.5%)" "IPR001433 (10.2%) IPR008333 (10.2%) IPR010205 (10.2%)" "Oxidoreductase FAD/NAD(P)-binding (10.2%) Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain (10.2%) Na(+)-translocating NADH-quinone reductase subunit F (10.2%)" GGDLDNAIVIYDQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.5.1.108 (50%) 4.2.1.59 (50%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase (50%) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (50%)" "GO:0006633 (14.3%) GO:0009245 (14.3%)" "GO:0005737 (14.3%) GO:0016020 (14.3%)" "GO:0046872 (14.3%) GO:0103117 (14.3%) GO:0019171 (10%)" "fatty acid biosynthetic process (14.3%) lipid A biosynthetic process (14.3%)" "cytoplasm (14.3%) membrane (14.3%)" "metal ion binding (14.3%) UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.3%) (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (10%)" "IPR004463 (14.3%) IPR010084 (14.3%) IPR011334 (14.3%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.3%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (14.3%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.3%)" MTQVAHPVIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (1.4%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (1.4%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" GDPMPQPGIPESLNVLLHELR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (17.9%) GO:0006508 (5.3%)" GO:0000428 (17.9%) "GO:0003677 (17.9%) GO:0003899 (17.9%) GO:0032549 (17.9%)" "DNA-templated transcription (17.9%) proteolysis (5.3%)" DNA-directed RNA polymerase complex (17.9%) "DNA binding (17.9%) DNA-directed RNA polymerase activity (17.9%) ribonucleoside binding (17.9%)" "IPR007120 (7.7%) IPR007641 (7.7%) IPR015712 (7.7%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.7%) RNA polymerase Rpb2, domain 7 (7.7%) DNA-directed RNA polymerase, subunit 2 (7.7%)" EYSLNETQKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR032612 (100%) Protein of unknown function DUF4890 (100%) LEGSFETNPQFKPDYIYCGGSVPQSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.17.7.3 (100%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (100%) "GO:0016114 (17.1%) GO:0019288 (17.1%)" "GO:0046429 (17.1%) GO:0051539 (17.1%) GO:0005506 (16.2%)" "terpenoid biosynthetic process (17.1%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.1%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.1%) 4 iron, 4 sulfur cluster binding (17.1%) iron ion binding (16.2%)" "IPR004588 (25.6%) IPR011005 (25.6%) IPR017178 (24.4%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25.6%) Dihydropteroate synthase-like superfamily (25.6%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (24.4%)" GDPQAILTEQMYFYR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" RKPILSTITGGLSGPCVKPVALR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.-.- (85.7%) 1.3.1.14 (14.3%)" "Acting on the CH-CH group of donors (85.7%) dihydroorotate dehydrogenase (NAD(+)) (14.3%)" "GO:0006207 (25%) GO:0044205 (25%)" GO:0005737 (25%) "GO:0004152 (23.7%) GO:0004589 (1.3%)" "'de novo' pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" cytoplasm (25%) "dihydroorotate dehydrogenase activity (23.7%) dihydroorotate dehydrogenase (NAD+) activity (1.3%)" "IPR001295 (12.5%) IPR005720 (12.5%) IPR012135 (12.5%)" "Dihydroorotate dehydrogenase, conserved site (12.5%) Dihydroorotate dehydrogenase, catalytic (12.5%) Dihydroorotate dehydrogenase, class 1/ 2 (12.5%)" LRDNPECADQEHQAK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (18.7%) GO:0006164 (1.5%) GO:0006541 (0.1%)" "GO:0005737 (20.1%) GO:0005829 (0.1%)" "GO:0004642 (20.1%) GO:0046872 (19.5%) GO:0005524 (19.4%)" "'de novo' IMP biosynthetic process (18.7%) purine nucleotide biosynthetic process (1.5%) glutamine metabolic process (0.1%)" "cytoplasm (20.1%) cytosol (0.1%)" "phosphoribosylformylglycinamidine synthase activity (20.1%) metal ion binding (19.5%) ATP binding (19.4%)" "IPR029062 (11.8%) IPR036676 (11.8%) IPR010918 (11.4%)" "Class I glutamine amidotransferase-like (11.8%) PurM-like, C-terminal domain superfamily (11.8%) PurM-like, C-terminal domain (11.4%)" LAEGTPVIVTAGIEQDFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.6.1.- (97.1%) 2.6.1.1 (2.9%)" "Transaminases (97.1%) aspartate transaminase (2.9%)" GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" IVEPDRIFTFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.4.1.4 (88.9%) 1.4.1.2 (11.1%)" "glutamate dehydrogenase (NADP(+)) (88.9%) glutamate dehydrogenase (11.1%)" GO:0006537 (25.6%) "GO:0005829 (25.6%) GO:0009986 (0.5%)" "GO:0004354 (25.6%) GO:0000166 (22.3%) GO:0004352 (0.5%)" glutamate biosynthetic process (25.6%) "cytosol (25.6%) cell surface (0.5%)" "glutamate dehydrogenase (NADP+) activity (25.6%) nucleotide binding (22.3%) glutamate dehydrogenase (NAD+) activity (0.5%)" "IPR046346 (11.6%) IPR006097 (11.4%) IPR050724 (11.4%)" "Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.6%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.4%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.4%)" AIEPALTNPETANDPETWKLAGDFQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) SVEYMAAQGVEHLYEVGPGK root "2.3.1.39 (99.2%) 2.3.1.180 (0.8%)" "[acyl-carrier-protein] S-malonyltransferase (99.2%) beta-ketoacyl-[acyl-carrier-protein] synthase III (0.8%)" GO:0006633 (32.9%) GO:0005829 (32.7%) "GO:0004314 (32.9%) GO:0016746 (1.2%) GO:0004315 (0.3%)" fatty acid biosynthetic process (32.9%) cytosol (32.7%) "[acyl-carrier-protein] S-malonyltransferase activity (32.9%) acyltransferase activity (1.2%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (0.3%)" "IPR001227 (14.7%) IPR016035 (14.7%) IPR050858 (14.6%)" "Acyl transferase domain superfamily (14.7%) Acyl transferase/acyl hydrolase/lysophospholipase (14.7%) Malonyl CoA-ACP Transacylase/Polyketide Synthase FabD (14.6%)" TEHELSTNLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.5%) GO:0044210 (11.5%)" "GO:0005829 (11.5%) GO:0097268 (11.5%)" "GO:0003883 (11.5%) GO:0005524 (11.5%) GO:0042802 (11.5%)" "pyrimidine nucleobase biosynthetic process (11.5%) 'de novo' CTP biosynthetic process (11.5%)" "cytosol (11.5%) cytoophidium (11.5%)" "CTP synthase activity (11.5%) ATP binding (11.5%) identical protein binding (11.5%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" ASMISPDFVGHTVAVHNGNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0000028 (16.6%) GO:0006412 (16.6%)" "GO:0005737 (16.6%) GO:0015935 (16.6%) GO:0005840 (0.1%)" "GO:0003735 (16.6%) GO:0019843 (16.6%)" "ribosomal small subunit assembly (16.6%) translation (16.6%)" "cytoplasm (16.6%) small ribosomal subunit (16.6%) ribosome (0.1%)" "structural constituent of ribosome (16.6%) rRNA binding (16.6%)" "IPR002222 (25%) IPR005732 (25%) IPR023575 (25%)" "Small ribosomal subunit protein uS19 (25%) Small ribosomal subunit protein uS19, bacteria (25%) Small ribosomal subunit protein uS19, superfamily (25%)" VEDGILADVAPSILHILGLKQPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" KQEYVLETHDQYPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR021474 (100%) Protein of unknown function DUF3127 (100%) MTTIDKLTADGTYSNLSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (32.7%) "GO:0022627 (32.7%) GO:0005840 (1.9%)" GO:0003735 (32.7%) translation (32.7%) "cytosolic small ribosomal subunit (32.7%) ribosome (1.9%)" structural constituent of ribosome (32.7%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" KGAEGLQIAFLHPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (47.1%) "GO:0004493 (47.1%) GO:0016829 (2.9%) GO:0051213 (2.9%)" L-methylmalonyl-CoA metabolic process (47.1%) "methylmalonyl-CoA epimerase activity (47.1%) lyase activity (2.9%) dioxygenase activity (2.9%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" NTTEVLTASAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0044281 (33.3%) "GO:0016625 (33.3%) GO:0030976 (33.3%)" small molecule metabolic process (33.3%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (33.3%) thiamine pyrophosphate binding (33.3%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" IITHPNFNGNTLDNDIMLIKLSSPATLNSR Sus scrofa Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Laurasiatheria Artiodactyla Suina Suidae Sus Sus scrofa 3.4.21.4 (100%) trypsin (100%) "GO:0006508 (24.2%) GO:0007586 (24.2%)" "GO:0005576 (18.2%) GO:0005615 (6.1%)" "GO:0004252 (24.2%) GO:0046872 (3%)" "proteolysis (24.2%) digestion (24.2%)" "extracellular region (18.2%) extracellular space (6.1%)" "serine-type endopeptidase activity (24.2%) metal ion binding (3%)" "IPR001254 (14.3%) IPR001314 (14.3%) IPR009003 (14.3%)" "Serine proteases, trypsin domain (14.3%) Peptidase S1A, chymotrypsin family (14.3%) Peptidase S1, PA clan (14.3%)" TVYWESSDPSVATVDRETGLITPIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" VTAERNPADLK Pseudomonadati Bacteria Pseudomonadati "1.2.1.- (96.6%) 1.2.1.12 (3.4%)" "With NAD(+) or NADP(+) as acceptor (96.6%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (3.4%)" "GO:0006006 (23.4%) GO:0006096 (0.5%)" GO:0005737 (0.3%) "GO:0051287 (26.2%) GO:0050661 (23.4%) GO:0004365 (14.7%)" "glucose metabolic process (23.4%) glycolytic process (0.5%)" cytoplasm (0.3%) "NAD binding (26.2%) NADP binding (23.4%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (14.7%)" "IPR020828 (17%) IPR020829 (17%) IPR020830 (17%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17%) Glyceraldehyde 3-phosphate dehydrogenase, active site (17%)" VKSLEDLPEAEKAAEEK Parabacteroides gordonii MS-1 = DSM 23371 Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides gordonii Parabacteroides gordonii MS-1 = DSM 23371 "GO:0005975 (25%) GO:0006166 (25%)" "GO:0000287 (25%) GO:0008973 (25%)" "carbohydrate metabolic process (25%) purine ribonucleoside salvage (25%)" "magnesium ion binding (25%) phosphopentomutase activity (25%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" AFGEKHNLETK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (28%) IPR002933 (26.7%) IPR011650 (26.7%)" "Peptidase M20C, Xaa-His dipeptidase (28%) Peptidase M20 (26.7%) Peptidase M20, dimerisation domain (26.7%)" VVPELSLAPVAAR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%) GO:0043937 (0.1%)" GO:0005829 (16.5%) "GO:0004618 (16.5%) GO:0005524 (16.5%) GO:0043531 (16.5%)" "gluconeogenesis (16.5%) glycolytic process (16.5%) regulation of sporulation (0.1%)" cytosol (16.5%) "phosphoglycerate kinase activity (16.5%) ATP binding (16.5%) ADP binding (16.5%)" "IPR001576 (25%) IPR015824 (24.8%) IPR036043 (24.8%)" "Phosphoglycerate kinase (25%) Phosphoglycerate kinase, N-terminal (24.8%) Phosphoglycerate kinase superfamily (24.8%)" VGFKPAGGINTVHDALVYYTIVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (25%) GO:0016052 (25%)" GO:0005737 (25%) GO:0004139 (25%) "deoxyribonucleotide catabolic process (25%) carbohydrate catabolic process (25%)" cytoplasm (25%) deoxyribose-phosphate aldolase activity (25%) "IPR002915 (33.3%) IPR011343 (33.3%) IPR013785 (33.3%)" "DeoC/FbaB/LacD aldolase (33.3%) Deoxyribose-phosphate aldolase (33.3%) Aldolase-type TIM barrel (33.3%)" TSEELHHYYEIVWDEEQTHK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0005829 (4%) "GO:0016787 (92%) GO:0016788 (4%)" cytosol (4%) "hydrolase activity (92%) hydrolase activity, acting on ester bonds (4%)" "IPR008886 (34.2%) IPR029058 (33.5%) IPR022987 (32.4%)" "Uncharacterised protein family UPF0227/Esterase YqiA (34.2%) Alpha/Beta hydrolase fold (33.5%) Uncharacterised protein family UPF0227 (32.4%)" GASPQLAIEKLEQLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0051301 (50%) GO:0009579 (50%) cell division (50%) thylakoid (50%) "IPR011990 (39.5%) IPR019734 (39.5%) IPR051685 (20.9%)" "Tetratricopeptide-like helical domain superfamily (39.5%) Tetratricopeptide repeat (39.5%) Ycf3/AcsC/BcsC/TPR Multifunctional (20.9%)" NDAMHDPMVNESYCETFGWVSK root "6.3.2.6 (99.6%) 4.3.3.7 (0.4%)" "phosphoribosylaminoimidazolesuccinocarboxamide synthase (99.6%) 4-hydroxy-tetrahydrodipicolinate synthase (0.4%)" "GO:0006189 (19.8%) GO:0009236 (18.7%) GO:0006164 (0.3%)" "GO:0005829 (19.8%) GO:0016020 (0.2%) GO:0005737 (0.1%)" "GO:0005524 (20.1%) GO:0004639 (20%) GO:0016874 (0.6%)" "'de novo' IMP biosynthetic process (19.8%) cobalamin biosynthetic process (18.7%) purine nucleotide biosynthetic process (0.3%)" "cytosol (19.8%) membrane (0.2%) cytoplasm (0.1%)" "ATP binding (20.1%) phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (20%) ligase activity (0.6%)" "IPR028923 (20.3%) IPR018236 (20.2%) IPR050089 (20%)" "SAICAR synthetase/ADE2, N-terminal (20.3%) SAICAR synthetase, conserved site (20.2%) SAICAR synthetase (20%)" ALGQNVLTAVKPSQLMVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20.1%) "GO:0048500 (19.6%) GO:0005786 (0.6%)" "GO:0003924 (20.1%) GO:0005525 (20.1%) GO:0008312 (19.3%)" SRP-dependent cotranslational protein targeting to membrane (20.1%) "signal recognition particle (19.6%) signal recognition particle, endoplasmic reticulum targeting (0.6%)" "GTPase activity (20.1%) GTP binding (20.1%) 7S RNA binding (19.3%)" "IPR022941 (11.3%) IPR042101 (11.3%) IPR027417 (11.2%)" "Signal recognition particle, SRP54 subunit (11.3%) Signal recognition particle SRP54, N-terminal domain superfamily (11.3%) P-loop containing nucleoside triphosphate hydrolase (11.2%)" AADGSTVAQTALSYDDYR root "3.1.3.23 (95%) 3.1.3.- (5%)" "sugar-phosphatase (95%) Phosphoric monoester hydrolases (5%)" GO:0016311 (0.5%) GO:0005829 (32.7%) "GO:0000287 (32.7%) GO:0016791 (24.7%) GO:0050308 (8.7%)" dephosphorylation (0.5%) cytosol (32.7%) "magnesium ion binding (32.7%) phosphatase activity (24.7%) sugar-phosphatase activity (8.7%)" "IPR023214 (26%) IPR036412 (26%) IPR006379 (25.4%)" "HAD superfamily (26%) HAD-like superfamily (26%) HAD-superfamily hydrolase, subfamily IIB (25.4%)" KGPIFANFVLADEINR root "3.6.3.- (90.5%) 3.-.-.- (4.8%) 6.6.1.1 (4.8%)" "Acting on acid anhydrides; catalyzing transmembrane movement of substances (90.5%) Hydrolases (4.8%) magnesium chelatase (4.8%)" GO:0006355 (0.1%) "GO:0005524 (49.9%) GO:0016887 (49.9%) GO:0016851 (0.1%)" regulation of DNA-templated transcription (0.1%) "ATP binding (49.9%) ATP hydrolysis activity (49.9%) magnesium chelatase activity (0.1%)" "IPR011703 (25%) IPR050764 (25%) IPR027417 (25%)" "ATPase, AAA-3 (25%) CbbQ/NirQ/NorQ/GpvN (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" RYPAFGNLVPR root "1.3.5.1 (96.6%) 1.3.5.4 (2.5%) 1.3.99.1 (0.9%)" "succinate dehydrogenase (96.6%) Transferred entry: 1.3.5.1 (2.5%) Deleted entry (0.9%)" GO:0009061 (19.5%) GO:0005886 (19.5%) "GO:0009055 (19.5%) GO:0050660 (19.5%) GO:0000104 (15.4%)" anaerobic respiration (19.5%) plasma membrane (19.5%) "electron transfer activity (19.5%) flavin adenine dinucleotide binding (19.5%) succinate dehydrogenase activity (15.4%)" "IPR003953 (14.3%) IPR030664 (14.3%) IPR027477 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily (14.3%)" MFGDVPMVTEPTEDATLVEYPTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" GRPLVVLIDGVR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0044718 (25.1%) GO:0009279 (25.1%) "GO:0015344 (25.1%) GO:0038023 (24.4%) GO:0047091 (0.4%)" siderophore transmembrane transport (25.1%) cell outer membrane (25.1%) "siderophore uptake transmembrane transporter activity (25.1%) signaling receptor activity (24.4%) L-lysine 6-monooxygenase (NADPH) activity (0.4%)" "IPR012910 (14.5%) IPR037066 (14.5%) IPR039426 (14.5%)" "TonB-dependent receptor, plug domain (14.5%) TonB-dependent receptor, plug domain superfamily (14.5%) TonB-dependent receptor-like (14.5%)" FMNQVITYDEACLVSWQGGNMR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" LIAHFFPSIQFTEVLGQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.3.18 (100%) phosphoglycolate phosphatase (100%) GO:0006281 (33.3%) GO:0005829 (33.3%) GO:0008967 (33.3%) DNA repair (33.3%) cytosol (33.3%) phosphoglycolate phosphatase activity (33.3%) "IPR006439 (16.4%) IPR023198 (16.4%) IPR023214 (16.4%)" "HAD hydrolase, subfamily IA (16.4%) Phosphoglycolate phosphatase-like, domain 2 (16.4%) HAD superfamily (16.4%)" VINLDKESEPDIYAAIKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.4%) GO:0005829 (17.4%) "GO:0004612 (17.4%) GO:0005524 (17.4%) GO:0046872 (16.2%)" gluconeogenesis (17.4%) cytosol (17.4%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.4%) ATP binding (17.4%) metal ion binding (16.2%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" LMEAAVNKESGATVFAYHVNDPER root 2.7.7.24 (100%) glucose-1-phosphate thymidylyltransferase (100%) "GO:0009243 (0.7%) GO:0019305 (0.7%) GO:0000271 (0.4%)" GO:0005829 (0.2%) "GO:0008879 (49%) GO:0046872 (47.9%) GO:0000287 (0.4%)" "O antigen biosynthetic process (0.7%) dTDP-rhamnose biosynthetic process (0.7%) polysaccharide biosynthetic process (0.4%)" cytosol (0.2%) "glucose-1-phosphate thymidylyltransferase activity (49%) metal ion binding (47.9%) magnesium ion binding (0.4%)" "IPR005835 (33.4%) IPR005907 (33.4%) IPR029044 (33.2%)" "Nucleotidyl transferase domain (33.4%) Glucose-1-phosphate thymidylyltransferase, short form (33.4%) Nucleotide-diphospho-sugar transferases (33.2%)" IQYLDDLNKLVKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" VQNSGLEEMVFTDSIPYANR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" FSSSSGYGGGSSR Euarchontoglires Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Euarchontoglires "GO:0045109 (15.2%) GO:0030855 (14.4%) GO:0043588 (11.4%)" "GO:0005882 (12.9%) GO:0005829 (12.1%) GO:0005856 (2.3%)" "GO:0005198 (12.9%) GO:0030280 (1.5%) GO:0005200 (0.8%)" "intermediate filament organization (15.2%) epithelial cell differentiation (14.4%) skin development (11.4%)" "intermediate filament (12.9%) cytosol (12.1%) cytoskeleton (2.3%)" "structural molecule activity (12.9%) structural constituent of skin epidermis (1.5%) structural constituent of cytoskeleton (0.8%)" "IPR002957 (35.6%) IPR039008 (35.6%) IPR018039 (28.8%)" "Keratin, type I (35.6%) Intermediate filament, rod domain (35.6%) Intermediate filament protein, conserved site (28.8%)" REEAPAIQNQAASTTLGDIDALAALKEQLENK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" TTANPFAVQEIADALK Bacteroidota Bacteria Pseudomonadati Bacteroidota "5.4.99.5 (93.3%) 2.5.1.54 (6.7%)" "chorismate mutase (93.3%) 3-deoxy-7-phosphoheptulonate synthase (6.7%)" GO:0046417 (45.5%) "GO:0004106 (45.5%) GO:0003849 (9%)" chorismate metabolic process (45.5%) "chorismate mutase activity (45.5%) 3-deoxy-7-phosphoheptulonate synthase activity (9%)" "IPR006218 (17%) IPR013785 (17%) IPR052899 (17%)" "DAHP synthetase I/KDSA (17%) Aldolase-type TIM barrel (17%) Class-I DAHP synthase (17%)" WYSPAVLQLAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0005737 (33.3%) "GO:0016407 (33.3%) GO:0031405 (33.3%)" cytoplasm (33.3%) "acetyltransferase activity (33.3%) lipoic acid binding (33.3%)" "IPR000089 (12.5%) IPR001078 (12.5%) IPR003016 (12.5%)" "Biotin/lipoyl attachment (12.5%) 2-oxoacid dehydrogenase acyltransferase, catalytic domain (12.5%) 2-oxo acid dehydrogenase, lipoyl-binding site (12.5%)" YNQLIRIEEELGDR root "4.2.1.11 (99%) 5.3.1.1 (1%)" "phosphopyruvate hydratase (99%) triose-phosphate isomerase (1%)" "GO:0006096 (17.4%) GO:0006094 (0.2%) GO:0019563 (0.2%)" "GO:0000015 (17%) GO:0005576 (12.8%) GO:0009986 (12.8%)" "GO:0004634 (17.4%) GO:0000287 (17.2%) GO:0003676 (0.4%)" "glycolytic process (17.4%) gluconeogenesis (0.2%) glycerol catabolic process (0.2%)" "phosphopyruvate hydratase complex (17%) extracellular region (12.8%) cell surface (12.8%)" "phosphopyruvate hydratase activity (17.4%) magnesium ion binding (17.2%) nucleic acid binding (0.4%)" "IPR020810 (16.5%) IPR036849 (16.5%) IPR000941 (16.3%)" "Enolase, C-terminal TIM barrel domain (16.5%) Enolase-like, C-terminal domain superfamily (16.5%) Enolase (16.3%)" ALESAAALLNESPYCK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.5 (100%) xylose isomerase (100%) GO:0042732 (25%) GO:0005737 (25%) "GO:0009045 (25%) GO:0000287 (23.3%) GO:0046872 (1.7%)" D-xylose metabolic process (25%) cytoplasm (25%) "xylose isomerase activity (25%) magnesium ion binding (23.3%) metal ion binding (1.7%)" "IPR001998 (25%) IPR013022 (25%) IPR013452 (25%)" "Xylose isomerase (25%) Xylose isomerase-like, TIM barrel domain (25%) Xylose isomerase, bacterial-type (25%)" FVPGFTPEFLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0016787 (50%) GO:0046872 (50%)" "hydrolase activity (50%) metal ion binding (50%)" IPR039461 (100%) Peptidase family M49 (100%) IFCGLNEVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.3.1 (71.4%) 6.4.1.1 (28.6%)" "methylmalonyl-CoA carboxytransferase (71.4%) pyruvate carboxylase (28.6%)" GO:0006094 (18.8%) GO:0005737 (18.8%) "GO:0003824 (33.9%) GO:0004736 (18.8%) GO:0047154 (7.1%)" gluconeogenesis (18.8%) cytoplasm (18.8%) "catalytic activity (33.9%) pyruvate carboxylase activity (18.8%) methylmalonyl-CoA carboxytransferase activity (7.1%)" "IPR013785 (24.1%) IPR000891 (23.7%) IPR003379 (23.7%)" "Aldolase-type TIM barrel (24.1%) Pyruvate carboxyltransferase (23.7%) Carboxylase, conserved domain (23.7%)" EASEGELAGVLGYTEDAVVSSDFLGDTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0006006 (25%) "GO:0050661 (25%) GO:0051287 (25%) GO:0004365 (13.9%)" glucose metabolic process (25%) "NADP binding (25%) NAD binding (25%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (13.9%)" "IPR006424 (17%) IPR020828 (17%) IPR020829 (17%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (17%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17%)" SKAEAESLYQSK Simiiformes Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Euarchontoglires Primates Haplorrhini Simiiformes "GO:0031424 (8.4%) GO:0045109 (8.4%) GO:0051290 (5.4%)" "GO:0045095 (10.8%) GO:0005615 (7.3%) GO:0005737 (5.7%)" "GO:0030280 (8.6%) GO:0046982 (5.4%) GO:0030246 (5.1%)" "keratinization (8.4%) intermediate filament organization (8.4%) protein heterotetramerization (5.4%)" "keratin filament (10.8%) extracellular space (7.3%) cytoplasm (5.7%)" "structural constituent of skin epidermis (8.6%) protein heterodimerization activity (5.4%) carbohydrate binding (5.1%)" "IPR003054 (20.2%) IPR032449 (20.2%) IPR039008 (20.2%)" "Keratin, type II (20.2%) Keratin type II cytoskeletal 1, tail (20.2%) Intermediate filament, rod domain (20.2%)" IVRDGLNLLYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (20.4%) IPR022615 (20.4%) IPR056147 (20.4%)" "Na(+)-translocating NADH-quinone reductase subunit A (20.4%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (20.4%) NqrA, N-terminal barrel-sandwich hybrid domain (20.4%)" FLEQQVVDKLEFMEENDRIWGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) GO:0000428 (17%) "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (15.2%)" DNA-templated transcription (17%) DNA-directed RNA polymerase complex (17%) "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (15.2%)" "IPR007081 (9.3%) IPR045867 (9.2%) IPR000722 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.3%) DNA-directed RNA polymerase, subunit beta-prime (9.2%) RNA polymerase, alpha subunit (9.1%)" DFLPILQPVAESGRPLLVIAEDVDSEALTTLVVNR Prevotella Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (18.8%) GO:0005737 (12.5%) "GO:0005524 (18.8%) GO:0016853 (18.8%) GO:0140662 (18.8%)" protein refolding (18.8%) cytoplasm (12.5%) "ATP binding (18.8%) isomerase activity (18.8%) ATP-dependent protein folding chaperone (18.8%)" "IPR001844 (17.6%) IPR002423 (17.6%) IPR027409 (17.6%)" "Chaperonin Cpn60/GroEL (17.6%) Chaperonin Cpn60/GroEL/TCP-1 family (17.6%) GroEL-like apical domain superfamily (17.6%)" AVAAVNGPIAQAILGK root "4.2.1.11 (99.4%) 6.3.4.2 (0.6%)" "phosphopyruvate hydratase (99.4%) CTP synthase (glutamine hydrolyzing) (0.6%)" "GO:0006096 (16.8%) GO:0006396 (0.1%) GO:0006401 (0.1%)" "GO:0000015 (16.8%) GO:0005576 (16.4%) GO:0009986 (14.4%)" "GO:0000287 (16.8%) GO:0004634 (16.8%) GO:0016829 (0.3%)" "glycolytic process (16.8%) RNA processing (0.1%) RNA catabolic process (0.1%)" "phosphopyruvate hydratase complex (16.8%) extracellular region (16.4%) cell surface (14.4%)" "magnesium ion binding (16.8%) phosphopyruvate hydratase activity (16.8%) lyase activity (0.3%)" "IPR000941 (17.1%) IPR020811 (17.1%) IPR029017 (17.1%)" "Enolase (17.1%) Enolase, N-terminal (17.1%) Enolase-like, N-terminal (17.1%)" TSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0010468 (31.8%) GO:0006302 (0.3%) GO:0006355 (0.3%)" "GO:0005737 (32.4%) GO:0005829 (0.3%)" "GO:0008270 (32.4%) GO:0003677 (2.2%) GO:0097216 (0.3%)" "regulation of gene expression (31.8%) double-strand break repair (0.3%) regulation of DNA-templated transcription (0.3%)" "cytoplasm (32.4%) cytosol (0.3%)" "zinc ion binding (32.4%) DNA binding (2.2%) guanosine tetraphosphate binding (0.3%)" "IPR037187 (17.6%) IPR048489 (17.4%) IPR012784 (16.9%)" "DksA, N-terminal domain superfamily (17.6%) DnaK suppressor protein DksA, N-terminal domain (17.4%) RNA polymerase-binding transcription factor DksA (16.9%)" SAVAAIEAVGGNAVKL Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25.5%) "GO:0022625 (24.5%) GO:0005840 (0.9%) GO:1990904 (0.9%)" "GO:0003735 (25.5%) GO:0019843 (22.6%)" translation (25.5%) "cytosolic large ribosomal subunit (24.5%) ribosome (0.9%) ribonucleoprotein complex (0.9%)" "structural constituent of ribosome (25.5%) rRNA binding (22.6%)" "IPR001196 (20.6%) IPR021131 (20.6%) IPR036227 (20.6%)" "Large ribosomal subunit protein uL15, conserved site (20.6%) Large ribosomal subunit protein uL15/eL18 (20.6%) Large ribosomal subunit protein uL15/eL18 superfamily (20.6%)" LLNAPVAYSFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.5.1 (100%) pyruvate dehydrogenase (quinone) (100%) GO:0019752 (25%) "GO:0000287 (25%) GO:0030976 (25%) GO:0003824 (19.6%)" carboxylic acid metabolic process (25%) "magnesium ion binding (25%) thiamine pyrophosphate binding (25%) catalytic activity (19.6%)" "IPR000399 (11.1%) IPR011766 (11.1%) IPR012000 (11.1%)" "TPP-binding enzyme, conserved site (11.1%) Thiamine pyrophosphate enzyme, TPP-binding (11.1%) Thiamine pyrophosphate enzyme, central domain (11.1%)" LLVEWDGGSGER Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) GO:0005737 (20%) "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (20%)" glycogen biosynthetic process (20%) cytoplasm (20%) "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (20%)" "IPR004193 (12.5%) IPR006047 (12.5%) IPR006048 (12.5%)" "Glycoside hydrolase, family 13, N-terminal (12.5%) Glycosyl hydrolase family 13, catalytic domain (12.5%) Alpha-amylase/branching enzyme, C-terminal all beta (12.5%)" TVNYIKENYPDQFIIADAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.23 (100%) orotidine-5'-phosphate decarboxylase (100%) "GO:0006207 (32.5%) GO:0044205 (32.5%)" "GO:0004590 (32.5%) GO:0016829 (2.4%)" "'de novo' pyrimidine nucleobase biosynthetic process (32.5%) 'de novo' UMP biosynthetic process (32.5%)" "orotidine-5'-phosphate decarboxylase activity (32.5%) lyase activity (2.4%)" "IPR001754 (25%) IPR011060 (25%) IPR011995 (25%)" "Orotidine 5'-phosphate decarboxylase domain (25%) Ribulose-phosphate binding barrel (25%) Orotidine 5'-phosphate decarboxylase, type 2 (25%)" DMSNGDMFLSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR002150 (25%) IPR027493 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL31 type A/B (25%) Large ribosomal subunit protein bL31 type B (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" AAQELYAKDPAEAVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.-.- (100%) Acting on peptide bonds (peptidases) (100%) GO:0006508 (33.3%) "GO:0016805 (33.3%) GO:0070004 (33.3%)" proteolysis (33.3%) "dipeptidase activity (33.3%) cysteine-type exopeptidase activity (33.3%)" IPR005322 (100%) Peptidase C69 (100%) YNYDGYPANPNGSPWSVAGVCSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.4%) GO:0006164 (1%)" GO:0005737 (20.4%) "GO:0004642 (20.4%) GO:0005524 (19.4%) GO:0046872 (19.4%)" "'de novo' IMP biosynthetic process (19.4%) purine nucleotide biosynthetic process (1%)" cytoplasm (20.4%) "phosphoribosylformylglycinamidine synthase activity (20.4%) ATP binding (19.4%) metal ion binding (19.4%)" "IPR029062 (11.6%) IPR036676 (11.6%) IPR010073 (11%)" "Class I glutamine amidotransferase-like (11.6%) PurM-like, C-terminal domain superfamily (11.6%) Phosphoribosylformylglycinamidine synthase PurL (11%)" KGISEQQIAEQLACFEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.22 (100%) ribosylnicotinamide kinase (100%) "GO:0016301 (66.7%) GO:0050262 (33.3%)" "kinase activity (66.7%) ribosylnicotinamide kinase activity (33.3%)" "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" SRVPFVNFFDGFR Bacteria Bacteria "1.2.7.1 (76.9%) 1.2.7.- (17.9%) 1.2.1.51 (5.1%)" "pyruvate synthase (76.9%) With an iron-sulfur protein as acceptor (17.9%) pyruvate dehydrogenase (NADP(+)) (5.1%)" "GO:0006979 (15.2%) GO:0022900 (14.5%) GO:0044281 (10.5%)" "GO:0051539 (15%) GO:0005506 (14.5%) GO:0030976 (14.2%)" "response to oxidative stress (15.2%) electron transport chain (14.5%) small molecule metabolic process (10.5%)" "4 iron, 4 sulfur cluster binding (15%) iron ion binding (14.5%) thiamine pyrophosphate binding (14.2%)" "IPR002880 (7.9%) IPR029061 (7.9%) IPR050722 (7.9%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.9%) Thiamin diphosphate-binding fold (7.9%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.9%)" AIGEAKDDDTADILTAASR root 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0006879 (14.1%) GO:0030261 (14.1%) GO:0006950 (0.2%)" "GO:0005737 (14.1%) GO:0009295 (13.6%) GO:0016020 (0.2%)" "GO:0008199 (14.3%) GO:0016722 (14.3%) GO:0003677 (14.1%)" "intracellular iron ion homeostasis (14.1%) chromosome condensation (14.1%) response to stress (0.2%)" "cytoplasm (14.1%) nucleoid (13.6%) membrane (0.2%)" "ferric iron binding (14.3%) oxidoreductase activity, acting on metal ions (14.3%) DNA binding (14.1%)" "IPR002177 (16.7%) IPR008331 (16.7%) IPR009078 (16.7%)" "DNA-binding protein Dps (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like superfamily (16.7%)" ALRPGIPYMDVYDLSAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.4.11.9 (97.9%) 3.4.-.- (2.1%)" "Xaa-Pro aminopeptidase (97.9%) Acting on peptide bonds (peptidases) (2.1%)" GO:0006508 (24.1%) "GO:0005829 (24.1%) GO:0016020 (3.6%)" "GO:0030145 (24.1%) GO:0070006 (24.1%)" proteolysis (24.1%) "cytosol (24.1%) membrane (3.6%)" "manganese ion binding (24.1%) metalloaminopeptidase activity (24.1%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" FFDNDVNKVPK root 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.2%) GO:0006043 (14.2%) GO:0006046 (14.2%)" "GO:0005829 (13.5%) GO:0005737 (0.7%)" "GO:0004342 (14.2%) GO:0042802 (14.2%) GO:0016853 (0.4%)" "carbohydrate metabolic process (14.2%) glucosamine catabolic process (14.2%) N-acetylglucosamine catabolic process (14.2%)" "cytosol (13.5%) cytoplasm (0.7%)" "glucosamine-6-phosphate deaminase activity (14.2%) identical protein binding (14.2%) isomerase activity (0.4%)" "IPR004547 (25%) IPR006148 (25%) IPR037171 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) NagB/RpiA transferase-like (25%)" DAFGNIYEESPNDMHHR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0009263 (20%) GO:0071897 (20%)" "GO:0004748 (20%) GO:0005524 (20%) GO:0031419 (20%)" "deoxyribonucleotide biosynthetic process (20%) DNA biosynthetic process (20%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20%) ATP binding (20%) cobalamin binding (20%)" "IPR000788 (25%) IPR013344 (25%) IPR013509 (25%)" "Ribonucleotide reductase large subunit, C-terminal (25%) Ribonucleotide reductase, adenosylcobalamin-dependent (25%) Ribonucleotide reductase large subunit, N-terminal (25%)" IVTGVGVPQITAVADAVEALEGTGIPVIADGGIR root 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20.1%) GO:0006183 (20.1%) GO:0009411 (0.2%)" "GO:0005737 (0.3%) GO:0005829 (0.2%) GO:0005886 (0.2%)" "GO:0003938 (20.1%) GO:0046872 (20.1%) GO:0000166 (17%)" "GMP biosynthetic process (20.1%) GTP biosynthetic process (20.1%) response to UV (0.2%)" "cytoplasm (0.3%) cytosol (0.2%) plasma membrane (0.2%)" "IMP dehydrogenase activity (20.1%) metal ion binding (20.1%) nucleotide binding (17%)" "IPR001093 (17.1%) IPR005990 (17.1%) IPR013785 (17.1%)" "IMP dehydrogenase/GMP reductase (17.1%) Inosine-5'-monophosphate dehydrogenase (17.1%) Aldolase-type TIM barrel (17.1%)" KGYTQQLAFR Craniata Eukaryota Metazoa Chordata Craniata "GO:0006954 (12.6%) GO:0006957 (7.6%) GO:0006958 (7.6%)" "GO:0005615 (15.8%) GO:0009986 (1.2%) GO:0032991 (1.2%)" "GO:0004866 (14.1%) GO:0031715 (1.4%) GO:0048018 (1.4%)" "inflammatory response (12.6%) complement activation, alternative pathway (7.6%) complement activation, classical pathway (7.6%)" "extracellular space (15.8%) cell surface (1.2%) protein-containing complex (1.2%)" "endopeptidase inhibitor activity (14.1%) C5L2 anaphylatoxin chemotactic receptor binding (1.4%) receptor ligand activity (1.4%)" "IPR008930 (5.2%) IPR011626 (5.2%) IPR050473 (5.2%)" "Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid (5.2%) Alpha-macroglobulin-like, TED domain (5.2%) Alpha-2-macroglobulin/Complement system (5.2%)" SATGTPNNDAYQEIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) GO:0017004 (25.3%) GO:0030313 (25.3%) "GO:0016209 (24.2%) GO:0016491 (24.2%) GO:0004601 (1.1%)" cytochrome complex assembly (25.3%) cell envelope (25.3%) "antioxidant activity (24.2%) oxidoreductase activity (24.2%) peroxidase activity (1.1%)" "IPR000866 (16.7%) IPR013766 (16.7%) IPR017937 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Thioredoxin, conserved site (16.7%)" YNNPAIILADGIIGQMMEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0016491 (80%) GO:0019164 (20%)" "oxidoreductase activity (80%) pyruvate synthase activity (20%)" "IPR002880 (20%) IPR009014 (20%) IPR029061 (20%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%) Thiamin diphosphate-binding fold (20%)" MDLFEQVSEDIKNAMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0016884 (85.7%) GO:0016740 (14.3%)" "carbon-nitrogen ligase activity, with glutamine as amido-N-donor (85.7%) transferase activity (14.3%)" "IPR003789 (25%) IPR019004 (25%) IPR023168 (25%)" "Aspartyl/glutamyl-tRNA amidotransferase subunit B-like (25%) Uncharacterised protein YqeY/Aim41 (25%) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 (25%)" TAAAVENFAGMDLSLLEISHR Parabacteroides acidifaciens Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides acidifaciens 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" AATIIDEIAQIMLTDTSKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006811 (24.5%) "GO:0009279 (26.5%) GO:0046930 (24.5%)" GO:0015288 (24.5%) monoatomic ion transport (24.5%) "cell outer membrane (26.5%) pore complex (24.5%)" porin activity (24.5%) "IPR006664 (16.9%) IPR006665 (16.9%) IPR006690 (16.9%)" "Outer membrane protein, bacterial (16.9%) OmpA-like domain (16.9%) Outer membrane protein, OmpA-like, conserved site (16.9%)" EKYIGSDENWEKAEQAIIEACEEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.7%) GO:0005737 (16.7%) "GO:0004829 (16.7%) GO:0005524 (16.7%) GO:0046872 (16.7%)" threonyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "threonine-tRNA ligase activity (16.7%) ATP binding (16.7%) metal ion binding (16.7%)" "IPR002314 (7.8%) IPR002320 (7.8%) IPR004154 (7.8%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.8%) Threonine-tRNA ligase, class IIa (7.8%) Anticodon-binding (7.8%)" IAELDRIPAIELNISCPNVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.3.-.- (78.6%) 1.3.1.14 (21.4%)" "Acting on the CH-CH group of donors (78.6%) dihydroorotate dehydrogenase (NAD(+)) (21.4%)" "GO:0006207 (25%) GO:0044205 (25%)" GO:0005737 (25%) "GO:0004152 (22.9%) GO:0004589 (2.1%)" "'de novo' pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" cytoplasm (25%) "dihydroorotate dehydrogenase activity (22.9%) dihydroorotate dehydrogenase (NAD+) activity (2.1%)" "IPR001295 (12.5%) IPR005720 (12.5%) IPR012135 (12.5%)" "Dihydroorotate dehydrogenase, conserved site (12.5%) Dihydroorotate dehydrogenase, catalytic (12.5%) Dihydroorotate dehydrogenase, class 1/ 2 (12.5%)" HFYSLTQIPRPSGHMEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) "GO:0006508 (25.1%) GO:0043171 (0.2%)" GO:0005829 (24.7%) "GO:0070573 (25.1%) GO:0046872 (24.9%)" "proteolysis (25.1%) peptide catabolic process (0.2%)" cytosol (24.7%) "metallodipeptidase activity (25.1%) metal ion binding (24.9%)" "IPR001160 (31%) IPR002933 (30.7%) IPR011650 (30.7%)" "Peptidase M20C, Xaa-His dipeptidase (31%) Peptidase M20 (30.7%) Peptidase M20, dimerisation domain (30.7%)" HVMVSTGTSDADFEKTK root 1.7.1.7 (100%) GMP reductase (100%) "GO:0006163 (19%) GO:0009117 (0.2%) GO:0006144 (0.1%)" "GO:0005829 (20.2%) GO:1902560 (19.4%) GO:0005737 (0.1%)" "GO:0003920 (20.1%) GO:0046872 (20.1%) GO:0016491 (0.5%)" "purine nucleotide metabolic process (19%) nucleotide metabolic process (0.2%) purine nucleobase metabolic process (0.1%)" "cytosol (20.2%) GMP reductase complex (19.4%) cytoplasm (0.1%)" "GMP reductase activity (20.1%) metal ion binding (20.1%) oxidoreductase activity (0.5%)" "IPR001093 (20.3%) IPR050139 (20.3%) IPR013785 (20.2%)" "IMP dehydrogenase/GMP reductase (20.3%) Guanosine monophosphate reductase (20.3%) Aldolase-type TIM barrel (20.2%)" AEIEGEIGDSHMGLAAR root 3.6.1.15 (100%) nucleoside-triphosphate phosphatase (100%) "GO:0006310 (13.4%) GO:0006281 (13.4%) GO:0009432 (12.1%)" "GO:0005829 (13.3%) GO:0005737 (0%) GO:0009355 (0%)" "GO:0003697 (13.4%) GO:0005524 (13.4%) GO:0140664 (13.4%)" "DNA recombination (13.4%) DNA repair (13.4%) SOS response (12.1%)" "cytosol (13.3%) cytoplasm (0%) DNA polymerase V complex (0%)" "single-stranded DNA binding (13.4%) ATP binding (13.4%) ATP-dependent DNA damage sensor activity (13.4%)" "IPR013765 (12.9%) IPR020588 (12.9%) IPR049428 (12.9%)" "DNA recombination and repair protein RecA (12.9%) DNA recombination and repair protein RecA-like, ATP-binding domain (12.9%) RecA-like, N-terminal (12.9%)" AAAQTLGLNK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (33.3%) GO:0015934 (33.3%) GO:0003735 (33.3%) translation (33.3%) large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR005996 (33.3%) IPR016082 (33.3%) IPR036919 (33.3%)" "Large ribosomal subunit protein uL30, bacteria (33.3%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (33.3%) Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily (33.3%)" YKDGVAYDGFNDPELR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004824 (16.7%) GO:0005524 (16.7%)" lysyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) lysine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR004364 (11.2%) IPR004365 (11.2%) IPR006195 (11.2%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (11.2%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.2%) Aminoacyl-tRNA synthetase, class II (11.2%)" TTPSIVAFVDGGERK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0005737 (4.7%) GO:0070013 (0.6%)" "GO:0005524 (31.8%) GO:0140662 (31.8%) GO:0051082 (31.2%)" "cytoplasm (4.7%) intracellular organelle lumen (0.6%)" "ATP binding (31.8%) ATP-dependent protein folding chaperone (31.8%) unfolded protein binding (31.2%)" "IPR013126 (16.8%) IPR018181 (16.8%) IPR043129 (16.8%)" "Heat shock protein 70 family (16.8%) Heat shock protein 70, conserved site (16.8%) ATPase, nucleotide binding domain (16.8%)" DKEVVMGTVTSMNKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" QLILDCEIVCPISGTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.5%) GO:0015966 (12.5%)" "GO:0005737 (12.5%) GO:0070062 (12.5%) GO:1990742 (12.5%)" "GO:0004081 (12.5%) GO:0004820 (12.5%) GO:0005524 (12.5%)" "glycyl-tRNA aminoacylation (12.5%) diadenosine tetraphosphate biosynthetic process (12.5%)" "cytoplasm (12.5%) extracellular exosome (12.5%) microvesicle (12.5%)" "bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.5%) glycine-tRNA ligase activity (12.5%) ATP binding (12.5%)" "IPR002314 (11.1%) IPR002315 (11.1%) IPR004154 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Glycyl-tRNA synthetase (11.1%) Anticodon-binding (11.1%)" AVVVTSGTTSEVLLNKLNEEQK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006865 (32.5%) GO:0015813 (0.3%) GO:0070778 (0.3%)" "GO:0005576 (32.5%) GO:0030288 (32.5%) GO:0016020 (0.3%)" "GO:0016595 (0.3%) GO:0070335 (0.3%)" "amino acid transport (32.5%) L-glutamate transmembrane transport (0.3%) L-aspartate transmembrane transport (0.3%)" "extracellular region (32.5%) outer membrane-bounded periplasmic space (32.5%) membrane (0.3%)" "glutamate binding (0.3%) aspartate binding (0.3%)" "IPR001638 (50%) IPR051455 (50%)" "Solute-binding protein family 3/N-terminal domain of MltF (50%) Bacterial solute-binding protein 3 (50%)" GKGIIGSNELTDFVEALKTPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" VITGSLTELVCTLDKK Clostridia Bacteria Bacillati Bacillota Clostridia "1.2.1.- (91.7%) 1.2.1.12 (8.3%)" "With NAD(+) or NADP(+) as acceptor (91.7%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (8.3%)" GO:0006006 (25%) "GO:0016620 (25%) GO:0050661 (25%) GO:0051287 (25%)" glucose metabolic process (25%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (25%) NADP binding (25%) NAD binding (25%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" VYADANGNPAPYSETNVPLRPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.14.- (100%) Dipeptidyl-peptidases and tripeptidyl-peptidases (100%) "GO:0006508 (25%) GO:0043171 (25%)" "GO:0008239 (25%) GO:0070009 (25%)" "proteolysis (25%) peptide catabolic process (25%)" "dipeptidyl-peptidase activity (25%) serine-type aminopeptidase activity (25%)" "IPR009003 (33.3%) IPR019500 (33.3%) IPR043504 (33.3%)" "Peptidase S1, PA clan (33.3%) Peptidase S46 (33.3%) Peptidase S1, PA clan, chymotrypsin-like fold (33.3%)" QYITALNIIHYMHDK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (28.8%) GO:0044814 (0.3%)" "GO:0005829 (32.1%) GO:0005737 (0.5%) GO:0016020 (0.3%)" "GO:0008861 (32.7%) GO:0016829 (4.6%) GO:0016746 (0.8%)" "glucose metabolic process (28.8%) pyruvate fermentation via PFL (0.3%)" "cytosol (32.1%) cytoplasm (0.5%) membrane (0.3%)" "formate C-acetyltransferase activity (32.7%) lyase activity (4.6%) acyltransferase activity (0.8%)" "IPR004184 (21.1%) IPR050244 (21.1%) IPR001150 (19.8%)" "Pyruvate formate lyase domain (21.1%) Autonomous Glycyl Radical Cofactor (21.1%) Glycine radical domain (19.8%)" ELNPDVNSLGSR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola NLILHYGDLTDSLNLTR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 4.2.1.47 (100%) GDP-mannose 4,6-dehydratase (100%) GO:0042351 (33.3%) "GO:0008446 (33.3%) GO:0070401 (33.3%)" 'de novo' GDP-L-fucose biosynthetic process (33.3%) "GDP-mannose 4,6-dehydratase activity (33.3%) NADP+ binding (33.3%)" "IPR006368 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "GDP-mannose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" LLVPDMALTAAEYFAVQHNQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (31.8%) GO:1902600 (31.8%)" "GO:0005524 (31.8%) GO:0016787 (4.5%)" "ATP metabolic process (31.8%) proton transmembrane transport (31.8%)" "ATP binding (31.8%) hydrolase activity (4.5%)" "IPR000194 (20%) IPR004100 (20%) IPR022879 (20%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (20%) V-type ATP synthase regulatory subunit B/beta (20%)" IYTTNYDDIIETAYK YYQGTPSPVKHPELTDMVIFR root 1.1.1.42 (100%) isocitrate dehydrogenase (NADP(+)) (100%) "GO:0006099 (21.4%) GO:0006097 (17.9%) GO:0006979 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004450 (21.4%) GO:0000287 (17.8%) GO:0051287 (17.8%)" "tricarboxylic acid cycle (21.4%) glyoxylate cycle (17.9%) response to oxidative stress (0%)" "cytoplasm (0%) cytosol (0%)" "isocitrate dehydrogenase (NADP+) activity (21.4%) magnesium ion binding (17.8%) NAD binding (17.8%)" "IPR004439 (35.3%) IPR024084 (35.3%) IPR019818 (29.4%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (35.3%) Isopropylmalate dehydrogenase-like domain (35.3%) Isocitrate/isopropylmalate dehydrogenase, conserved site (29.4%)" QHLLSEEDPIFAFNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.1.1.23 (100%) orotidine-5'-phosphate decarboxylase (100%) "GO:0006207 (33.3%) GO:0044205 (33.3%)" GO:0004590 (33.3%) "'de novo' pyrimidine nucleobase biosynthetic process (33.3%) 'de novo' UMP biosynthetic process (33.3%)" orotidine-5'-phosphate decarboxylase activity (33.3%) "IPR001754 (25%) IPR011060 (25%) IPR011995 (25%)" "Orotidine 5'-phosphate decarboxylase domain (25%) Ribulose-phosphate binding barrel (25%) Orotidine 5'-phosphate decarboxylase, type 2 (25%)" KTNAALHEVGAL Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.37 (94.7%) 1.1.1.- (5.3%)" "malate dehydrogenase (94.7%) With NAD(+) or NADP(+) as acceptor (5.3%)" "GO:0006089 (25%) GO:0006099 (23.5%)" "GO:0004459 (25%) GO:0030060 (25%) GO:0016616 (1.5%)" "lactate metabolic process (25%) tricarboxylic acid cycle (23.5%)" "L-lactate dehydrogenase (NAD+) activity (25%) L-malate dehydrogenase (NAD+) activity (25%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (1.5%)" "IPR022383 (17.8%) IPR001236 (16.8%) IPR011275 (16.8%)" "Lactate/malate dehydrogenase, C-terminal (17.8%) Lactate/malate dehydrogenase, N-terminal (16.8%) Malate dehydrogenase, type 3 (16.8%)" GYASNAANFEDTAKVVEEIHKDFGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) GO:0006633 (33.3%) "GO:0004316 (33.3%) GO:0051287 (33.3%)" fatty acid biosynthetic process (33.3%) "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33.3%) NAD binding (33.3%)" "IPR002347 (16.7%) IPR011284 (16.7%) IPR020904 (16.7%)" "Short-chain dehydrogenase/reductase SDR (16.7%) 3-oxoacyl-(acyl-carrier-protein) reductase (16.7%) Short-chain dehydrogenase/reductase, conserved site (16.7%)" EYEKPLNVYGYSK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 5.1.3.20 (100%) ADP-glyceromanno-heptose 6-epimerase (100%) "GO:0097171 (22.6%) GO:0009244 (19.8%) GO:0005975 (5.7%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0008712 (25.9%) GO:0050661 (25.5%) GO:0016853 (0.3%)" "ADP-L-glycero-beta-D-manno-heptose biosynthetic process (22.6%) lipopolysaccharide core region biosynthetic process (19.8%) carbohydrate metabolic process (5.7%)" "cytosol (0%) membrane (0%)" "ADP-glyceromanno-heptose 6-epimerase activity (25.9%) NADP binding (25.5%) isomerase activity (0.3%)" "IPR001509 (33.6%) IPR036291 (33.6%) IPR011912 (32.7%)" "NAD-dependent epimerase/dehydratase (33.6%) NAD(P)-binding domain superfamily (33.6%) ADP-L-glycero-D-manno-heptose-6-epimerase (32.7%)" YFNALSGAGPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0044718 (33.3%) GO:0009279 (33.3%) GO:0015344 (33.3%) siderophore transmembrane transport (33.3%) cell outer membrane (33.3%) siderophore uptake transmembrane transporter activity (33.3%) "IPR000531 (12.5%) IPR008969 (12.5%) IPR012910 (12.5%)" "TonB-dependent receptor-like, beta-barrel (12.5%) Carboxypeptidase-like, regulatory domain superfamily (12.5%) TonB-dependent receptor, plug domain (12.5%)" GTFAQLSELHCDK Sarcopterygii Eukaryota Metazoa Chordata Craniata Sarcopterygii "GO:0042744 (8%) GO:0006954 (0.3%) GO:0030185 (0.3%)" "GO:0005833 (9%) GO:0031838 (8.1%) GO:0072562 (7.7%)" "GO:0005344 (9%) GO:0019825 (9%) GO:0020037 (9%)" "hydrogen peroxide catabolic process (8%) inflammatory response (0.3%) nitric oxide transport (0.3%)" "hemoglobin complex (9%) haptoglobin-hemoglobin complex (8.1%) blood microparticle (7.7%)" "oxygen carrier activity (9%) oxygen binding (9%) heme binding (9%)" "IPR000971 (20%) IPR050056 (20%) IPR002337 (19.9%)" "Globin (20%) Hemoglobin and related oxygen transporters (20%) Hemoglobin, beta-type (19.9%)" EYDAAISPNGNIPVHAFNLISPTFFANSSTGNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" AITGIFFGSDTGNTENIAK root GO:0006355 (0.1%) "GO:0005737 (0.1%) GO:0005829 (0.1%)" "GO:0009055 (49.8%) GO:0010181 (49.8%)" regulation of DNA-templated transcription (0.1%) "cytoplasm (0.1%) cytosol (0.1%)" "electron transfer activity (49.8%) FMN binding (49.8%)" "IPR001226 (20%) IPR008254 (20%) IPR029039 (20%)" "Flavodoxin, conserved site (20%) Flavodoxin/nitric oxide synthase (20%) Flavoprotein-like superfamily (20%)" EDLLKGNAAIAEEFGKNVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.37 (93.3%) 1.1.1.- (6.7%)" "malate dehydrogenase (93.3%) With NAD(+) or NADP(+) as acceptor (6.7%)" "GO:0006108 (33%) GO:0006099 (1.3%) GO:0019752 (0.3%)" GO:0005737 (1.3%) "GO:0016615 (29.8%) GO:0016616 (29.8%) GO:0030060 (4.4%)" "malate metabolic process (33%) tricarboxylic acid cycle (1.3%) carboxylic acid metabolic process (0.3%)" cytoplasm (1.3%) "malate dehydrogenase activity (29.8%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (29.8%) L-malate dehydrogenase (NAD+) activity (4.4%)" "IPR001236 (17.1%) IPR036291 (17.1%) IPR001557 (16.5%)" "Lactate/malate dehydrogenase, N-terminal (17.1%) NAD(P)-binding domain superfamily (17.1%) L-lactate/malate dehydrogenase (16.5%)" GVCNHHDLGPLGGIANDAGIRR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) "GO:0004553 (44.4%) GO:0004565 (5.6%)" carbohydrate metabolic process (50%) "hydrolase activity, hydrolyzing O-glycosyl compounds (44.4%) beta-galactosidase activity (5.6%)" "IPR006101 (7.7%) IPR006102 (7.7%) IPR006103 (7.7%)" "Glycoside hydrolase, family 2 (7.7%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.7%) Glycoside hydrolase family 2, catalytic domain (7.7%)" GMGSLEAMENGSKDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (20.6%) GO:0006177 (20.2%)" "GO:0003938 (20.6%) GO:0046872 (20.2%) GO:0000166 (18.4%)" "GTP biosynthetic process (20.6%) GMP biosynthetic process (20.2%)" "IMP dehydrogenase activity (20.6%) metal ion binding (20.2%) nucleotide binding (18.4%)" "IPR001093 (16.9%) IPR005990 (16.9%) IPR013785 (16.9%)" "IMP dehydrogenase/GMP reductase (16.9%) Inosine-5'-monophosphate dehydrogenase (16.9%) Aldolase-type TIM barrel (16.9%)" VCMHNVEDKDIFRPSAWNAFGMDKEGADYR LDDGTPCCQWIGPGGAGHFVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" VKDSDIEFTIFTTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.4 (100%) leucine--tRNA ligase (100%) GO:0006429 (19.9%) "GO:0005829 (19.9%) GO:0005739 (0.2%)" "GO:0002161 (20%) GO:0004823 (20%) GO:0005524 (20%)" leucyl-tRNA aminoacylation (19.9%) "cytosol (19.9%) mitochondrion (0.2%)" "aminoacyl-tRNA deacylase activity (20%) leucine-tRNA ligase activity (20%) ATP binding (20%)" "IPR001412 (12.5%) IPR002302 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Leucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" ATSSMVYSHHAQVSSSIAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" LTSQTVLPDMLPGQFAEIR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0044205 (16.7%) "GO:0009055 (16.7%) GO:0016491 (16.7%) GO:0046872 (16.7%)" 'de novo' UMP biosynthetic process (16.7%) "electron transfer activity (16.7%) oxidoreductase activity (16.7%) metal ion binding (16.7%)" "IPR001433 (11.1%) IPR012165 (11.1%) IPR017927 (11.1%)" "Oxidoreductase FAD/NAD(P)-binding (11.1%) Cytochrome-c3 hydrogenase, gamma subunit (11.1%) FAD-binding domain, ferredoxin reductase-type (11.1%)" VTDCYGPIPYSQVANGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" MAALMEQPVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.2.1.1 (97%) 2.2.1.- (3%)" "transketolase (97%) Transketolases and transaldolases (3%)" GO:0006098 (24.8%) "GO:0005829 (24.8%) GO:0016020 (0.4%)" "GO:0004802 (24.8%) GO:0046872 (24.8%) GO:0047896 (0.4%)" pentose-phosphate shunt (24.8%) "cytosol (24.8%) membrane (0.4%)" "transketolase activity (24.8%) metal ion binding (24.8%) formaldehyde transketolase activity (0.4%)" "IPR005475 (12.7%) IPR009014 (12.7%) IPR029061 (12.7%)" "Transketolase-like, pyrimidine-binding domain (12.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.7%) Thiamin diphosphate-binding fold (12.7%)" FTREDNAEFANPGYNDSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) "GO:0004553 (43.3%) GO:0004565 (6.7%)" carbohydrate metabolic process (50%) "hydrolase activity, hydrolyzing O-glycosyl compounds (43.3%) beta-galactosidase activity (6.7%)" "IPR051913 (8%) IPR006102 (7.8%) IPR006103 (7.8%)" "Glycosyl Hydrolase 2 Domain-Containing Protein (8%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.8%) Glycoside hydrolase family 2, catalytic domain (7.8%)" YNASVMVDEAHGIGVFGDHGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.50 (100%) serine C-palmitoyltransferase (100%) GO:0030148 (24.2%) GO:0016020 (24.2%) "GO:0030170 (24.2%) GO:0008483 (15.2%) GO:0016740 (6.1%)" sphingolipid biosynthetic process (24.2%) membrane (24.2%) "pyridoxal phosphate binding (24.2%) transaminase activity (15.2%) transferase activity (6.1%)" "IPR001917 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class-II, pyridoxal-phosphate binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" MLNIVIFGAPGSGK Bacteria Bacteria "2.7.4.3 (98.3%) 2.7.4.- (1.7%)" "adenylate kinase (98.3%) Phosphotransferases with a phosphate group as acceptor (1.7%)" "GO:0044209 (23.9%) GO:0006139 (0.3%) GO:0009123 (0.2%)" "GO:0005737 (24.3%) GO:0005829 (0.2%)" "GO:0005524 (25.2%) GO:0004017 (24.8%) GO:0019205 (0.5%)" "AMP salvage (23.9%) nucleobase-containing compound metabolic process (0.3%) nucleoside monophosphate metabolic process (0.2%)" "cytoplasm (24.3%) cytosol (0.2%)" "ATP binding (25.2%) AMP kinase activity (24.8%) nucleobase-containing compound kinase activity (0.5%)" "IPR000850 (31.9%) IPR027417 (31.9%) IPR033690 (31.7%)" "Adenylate kinase/UMP-CMP kinase (31.9%) P-loop containing nucleoside triphosphate hydrolase (31.9%) Adenylate kinase, conserved site (31.7%)" VYAFPVQDGDMVCNLGSIANTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR031025 (50%) IPR032295 (50%)" "LruC domain (50%) Domain of unknown function DUF4842 (50%)" IIRGEAPVALLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.11.9 (50%) 3.4.-.- (25%) 3.4.11.- (25%)" "Xaa-Pro aminopeptidase (50%) Acting on peptide bonds (peptidases) (25%) Aminopeptidases (25%)" GO:0005737 (33%) "GO:0046872 (33%) GO:0070006 (33%) GO:0004177 (1.1%)" cytoplasm (33%) "metal ion binding (33%) metalloaminopeptidase activity (33%) aminopeptidase activity (1.1%)" "IPR000587 (14.3%) IPR000994 (14.3%) IPR029149 (14.3%)" "Creatinase, N-terminal (14.3%) Peptidase M24 (14.3%) Creatinase/Aminopeptidase P/Spt16, N-terminal (14.3%)" ANAGHVAVVDFGVSEAPSTK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (20.5%) "GO:0005840 (20.5%) GO:1990904 (20.5%)" "GO:0003735 (20.5%) GO:0019843 (18.2%)" translation (20.5%) "ribosome (20.5%) ribonucleoprotein complex (20.5%)" "structural constituent of ribosome (20.5%) rRNA binding (18.2%)" "IPR002136 (34.6%) IPR023574 (34.6%) IPR013005 (30.8%)" "Large ribosomal subunit protein uL4 (34.6%) Large ribosomal subunit protein uL4 domain superfamily (34.6%) Large ribosomal subunit protein uL4-like (30.8%)" FYDFVVATLENTPVKE Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25.3%) GO:0005829 (25.3%) "GO:0070573 (25.3%) GO:0046872 (24.2%)" proteolysis (25.3%) cytosol (25.3%) "metallodipeptidase activity (25.3%) metal ion binding (24.2%)" "IPR001160 (25.8%) IPR002933 (24.7%) IPR011650 (24.7%)" "Peptidase M20C, Xaa-His dipeptidase (25.8%) Peptidase M20 (24.7%) Peptidase M20, dimerisation domain (24.7%)" IHDSQLQAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.12 (100%) aspartate--tRNA ligase (100%) GO:0006422 (20%) GO:0005737 (20%) "GO:0003676 (20%) GO:0004815 (20%) GO:0005524 (20%)" aspartyl-tRNA aminoacylation (20%) cytoplasm (20%) "nucleic acid binding (20%) aspartate-tRNA ligase activity (20%) ATP binding (20%)" "IPR002312 (9.1%) IPR004115 (9.1%) IPR004364 (9.1%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.1%) GAD-like domain superfamily (9.1%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.1%)" GITITSAATTTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0032790 (20.5%) GO:0006412 (0.2%)" GO:0005737 (17.9%) "GO:0003746 (20.5%) GO:0003924 (20.5%) GO:0005525 (20.5%)" "ribosome disassembly (20.5%) translation (0.2%)" cytoplasm (17.9%) "translation elongation factor activity (20.5%) GTPase activity (20.5%) GTP binding (20.5%)" "IPR000795 (6.5%) IPR027417 (6.5%) IPR031157 (6.5%)" "Translational (tr)-type GTP-binding domain (6.5%) P-loop containing nucleoside triphosphate hydrolase (6.5%) Tr-type G domain, conserved site (6.5%)" GAWAEWEMDHIEMAVPISPEELR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.9%) GO:0006044 (32.9%)" "GO:0004342 (32.9%) GO:0016853 (1.3%)" "carbohydrate metabolic process (32.9%) N-acetylglucosamine metabolic process (32.9%)" "glucosamine-6-phosphate deaminase activity (32.9%) isomerase activity (1.3%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" TFPDNSVREYAKGTTAMQIAESISSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004829 (16.7%) GO:0005524 (16.7%)" threonyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) threonine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" KVFLAGVGALATTVEK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium IPR008769 (100%) Poly granule associated (100%) FVNHLMYDGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (20.1%) GO:0000028 (0.1%)" "GO:0015935 (20.1%) GO:0005840 (0.2%) GO:0022627 (0.1%)" "GO:0003735 (20.1%) GO:0019843 (20.1%) GO:0000049 (19.1%)" "translation (20.1%) ribosomal small subunit assembly (0.1%)" "small ribosomal subunit (20.1%) ribosome (0.2%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (20.1%) rRNA binding (20.1%) tRNA binding (19.1%)" "IPR023798 (24.9%) IPR036823 (24.9%) IPR000235 (24.8%)" "Small ribosomal subunit protein uS7 domain (24.9%) Small ribosomal subunit protein uS7 domain superfamily (24.9%) Small ribosomal subunit protein uS7 (24.8%)" ANATTPVEAENKTK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "6.4.1.7 (75%) 6.4.1.1 (25%)" "2-oxoglutarate carboxylase (75%) pyruvate carboxylase (25%)" "GO:0004736 (80.8%) GO:0034029 (15.4%) GO:0003824 (3.8%)" "pyruvate carboxylase activity (80.8%) 2-oxoglutarate carboxylase activity (15.4%) catalytic activity (3.8%)" "IPR000089 (14.6%) IPR011053 (14.6%) IPR050709 (14.6%)" "Biotin/lipoyl attachment (14.6%) Single hybrid motif (14.6%) Biotin Carboxyl Carrier/Decarboxylase Components (14.6%)" ASNENITTVMNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0044718 (33.3%) GO:0009279 (33.3%) GO:0015344 (33.3%) siderophore transmembrane transport (33.3%) cell outer membrane (33.3%) siderophore uptake transmembrane transporter activity (33.3%) "IPR000531 (11.1%) IPR008969 (11.1%) IPR011662 (11.1%)" "TonB-dependent receptor-like, beta-barrel (11.1%) Carboxypeptidase-like, regulatory domain superfamily (11.1%) Secretin/TonB, short N-terminal domain (11.1%)" VIIDYPKQEEEKLIIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR011703 (25%) IPR027417 (25%) IPR041628 (25%)" "ATPase, AAA-3 (25%) P-loop containing nucleoside triphosphate hydrolase (25%) ChlI/MoxR, AAA lid domain (25%)" SFMVNAINETLKEEFR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (27.5%) GO:0003863 (5.8%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (27.5%) branched-chain 2-oxo acid dehydrogenase activity (5.8%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" HKIPTAEYQNFTEVEPALAYLR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0009113 (19.7%) GO:0006189 (19%) GO:0006164 (0.8%)" "GO:0004637 (19.7%) GO:0005524 (19.7%) GO:0046872 (19.6%)" "purine nucleobase biosynthetic process (19.7%) 'de novo' IMP biosynthetic process (19%) purine nucleotide biosynthetic process (0.8%)" "phosphoribosylamine-glycine ligase activity (19.7%) ATP binding (19.7%) metal ion binding (19.6%)" "IPR000115 (10.2%) IPR013815 (10.2%) IPR020561 (10.2%)" "Phosphoribosylglycinamide synthetase (10.2%) ATP-grasp fold, subdomain 1 (10.2%) Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (10.2%)" FAELIGDVVWDTK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (50%) GO:0016491 (25.8%) GO:0004601 (22.7%)" "iron ion binding (50%) oxidoreductase activity (25.8%) peroxidase activity (22.7%)" "IPR003251 (12.5%) IPR009040 (12.5%) IPR009078 (12.5%)" "Rubrerythrin, diiron-binding domain (12.5%) Ferritin-like diiron domain (12.5%) Ferritin-like superfamily (12.5%)" ALYHAVEGAITQMWTISALQMHEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (13.6%) GO:0005737 (0.7%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (13.6%) cytoplasm (0.7%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" FVCPIAAGTFMDMMYMPDGLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" LRNPIYFETASYGHMGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.5.1.6 (100%) methionine adenosyltransferase (100%) "GO:0006556 (17.1%) GO:0006730 (17.1%)" GO:0005737 (14.3%) "GO:0004478 (17.1%) GO:0005524 (17.1%) GO:0000287 (14.3%)" "S-adenosylmethionine biosynthetic process (17.1%) one-carbon metabolic process (17.1%)" cytoplasm (14.3%) "methionine adenosyltransferase activity (17.1%) ATP binding (17.1%) magnesium ion binding (14.3%)" "IPR002133 (16.9%) IPR022629 (16.9%) IPR022630 (16.9%)" "S-adenosylmethionine synthetase (16.9%) S-adenosylmethionine synthetase, central domain (16.9%) S-adenosylmethionine synthetase, C-terminal (16.9%)" AYLSIFPSDKSQELLEAIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0030490 (26.7%) GO:0006364 (6.7%)" GO:0005829 (33.3%) GO:0043024 (33.3%) "maturation of SSU-rRNA (26.7%) rRNA processing (6.7%)" cytosol (33.3%) ribosomal small subunit binding (33.3%) "IPR000238 (33.3%) IPR015946 (33.3%) IPR023799 (33.3%)" "Ribosome-binding factor A (33.3%) K homology domain-like, alpha/beta (33.3%) Ribosome-binding factor A domain superfamily (33.3%)" YGKEIADNTSILYGGSCKPSNAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%) GO:0019563 (16.5%)" "GO:0005829 (16.5%) GO:0016020 (0.6%)" GO:0004807 (16.5%) "gluconeogenesis (16.5%) glycolytic process (16.5%) glycerol catabolic process (16.5%)" "cytosol (16.5%) membrane (0.6%)" triose-phosphate isomerase activity (16.5%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" SDEIPEAAKEIMR Pseudomonadati Bacteria Pseudomonadati "GO:0009086 (20.2%) GO:0045892 (19.6%)" "GO:0005737 (20.2%) GO:0005829 (0%)" "GO:0003700 (20.2%) GO:0003677 (19.8%)" "methionine biosynthetic process (20.2%) negative regulation of DNA-templated transcription (19.6%)" "cytoplasm (20.2%) cytosol (0%)" "DNA-binding transcription factor activity (20.2%) DNA binding (19.8%)" "IPR002084 (33.3%) IPR010985 (33.3%) IPR023453 (33.3%)" "Methionine repressor MetJ (33.3%) Ribbon-helix-helix (33.3%) Methionine repressor MetJ domain superfamily (33.3%)" GSINFELMNSMPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (48%) GO:0016616 (36%) GO:0004617 (8%)" "NAD binding (48%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (36%) phosphoglycerate dehydrogenase activity (8%)" "IPR006140 (24%) IPR036291 (24%) IPR006139 (22%)" "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (24%) NAD(P)-binding domain superfamily (24%) D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (22%)" SDKEIAELFVPVLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004818 (16.7%) GO:0005524 (16.7%)" glutamyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR000924 (10%) IPR001412 (10%) IPR004527 (10%)" "Glutamyl/glutaminyl-tRNA synthetase (10%) Aminoacyl-tRNA synthetase, class I, conserved site (10%) Glutamate-tRNA ligase, bacterial/mitochondrial (10%)" TLCIDGITANEEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.9%) GO:0006531 (24.9%)" GO:0005829 (24.9%) "GO:0008797 (24.9%) GO:0016853 (0.5%)" "tricarboxylic acid cycle (24.9%) aspartate metabolic process (24.9%)" cytosol (24.9%) "aspartate ammonia-lyase activity (24.9%) isomerase activity (0.5%)" "IPR008948 (13.7%) IPR018951 (13.7%) IPR051546 (13.7%)" "L-Aspartase-like (13.7%) Fumarase C, C-terminal (13.7%) Class-II Aspartate Ammonia-Lyase (13.7%)" SAAYLQAAPFVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR013022 (33.3%) IPR036237 (33.3%) IPR050312 (33.3%)" "Xylose isomerase-like, TIM barrel domain (33.3%) Xylose isomerase-like superfamily (33.3%) IolE/XylA/MocC-like (33.3%)" LLEEIDRLPIELSPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.12.7.2 (75%) 1.12.-.- (25%)" "ferredoxin hydrogenase (75%) Acting on hydrogen as donors (25%)" "GO:0046872 (45.2%) GO:0051539 (26.2%) GO:0051536 (19%)" "metal ion binding (45.2%) 4 iron, 4 sulfur cluster binding (26.2%) iron-sulfur cluster binding (19%)" "IPR004108 (16.7%) IPR009016 (16.7%) IPR017896 (16.7%)" "Iron hydrogenase, large subunit, C-terminal (16.7%) Iron hydrogenase (16.7%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (16.7%)" TGQKIETIGEFLEIIKPLFGR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.1.1.199 (100%) 16S rRNA (cytosine(1402)-N(4))-methyltransferase (100%) GO:0070475 (33.3%) GO:0005737 (33.3%) GO:0071424 (33.3%) rRNA base methylation (33.3%) cytoplasm (33.3%) rRNA (cytosine-N4-)-methyltransferase activity (33.3%) "IPR002903 (33.3%) IPR023397 (33.3%) IPR029063 (33.3%)" "Ribosomal RNA small subunit methyltransferase H (33.3%) S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily (33.3%) S-adenosyl-L-methionine-dependent methyltransferase superfamily (33.3%)" NLNKTEEFLTTVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" NTTAPADQWIAGGIPVTMMMNMEKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" EDRDIADAVKETLEKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.16.1.1 (100%) mercury(II) reductase (100%) "GO:0003955 (45.7%) GO:0050660 (45.7%) GO:0016152 (5.7%)" "NAD(P)H dehydrogenase (quinone) activity (45.7%) flavin adenine dinucleotide binding (45.7%) mercury (II) reductase (NADP+) activity (5.7%)" "IPR001100 (20%) IPR004099 (20%) IPR016156 (20%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (20%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (20%) FAD/NAD-linked reductase, dimerisation domain superfamily (20%)" VHNMDIQYAQSGVFTPCDFAFPTDGKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.5.1.100 (92.9%) 3.5.1.4 (7.1%)" "(R)-amidase (92.9%) amidase (7.1%)" "GO:0016747 (64.2%) GO:0016787 (35.3%) GO:0004040 (0.5%)" "acyltransferase activity, transferring groups other than amino-acyl groups (64.2%) hydrolase activity (35.3%) amidase activity (0.5%)" "IPR036526 (20.2%) IPR001110 (20%) IPR003010 (20%)" "Carbon-nitrogen hydrolase superfamily (20.2%) Uncharacterised protein family UPF0012, conserved site (20%) Carbon-nitrogen hydrolase (20%)" KLASYADCYVNDAFGTAHR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" FLDATTDICPNWK Pseudomonadati Bacteria Pseudomonadati 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (24.9%) "GO:0004639 (25%) GO:0005524 (25%) GO:0016874 (0.1%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (24.9%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%) ligase activity (0.1%)" "IPR028923 (50.1%) IPR018236 (49.9%)" "SAICAR synthetase/ADE2, N-terminal (50.1%) SAICAR synthetase, conserved site (49.9%)" CKYDSPTDFDVVSLLNQNVASER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006879 (20%) GO:0005829 (20%) "GO:0004322 (20%) GO:0008199 (20%) GO:0020037 (20%)" intracellular iron ion homeostasis (20%) cytosol (20%) "ferroxidase activity (20%) ferric iron binding (20%) heme binding (20%)" "IPR008331 (16.7%) IPR009040 (16.7%) IPR009078 (16.7%)" "Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%) Ferritin-like superfamily (16.7%)" LIPIIYLK root "2.4.99.12 (42.9%) 5.4.99.25 (9.5%) 1.3.1.88 (4.8%)" "lipid IVA 3-deoxy-D-manno-octulosonic acid transferase (42.9%) tRNA pseudouridine(55) synthase (9.5%) tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] (4.8%)" "GO:0006313 (5.1%) GO:1902600 (1.8%) GO:0006813 (1.7%)" "GO:0016020 (9%) GO:0005886 (5.5%) GO:0005634 (2.9%)" "GO:0003677 (5.9%) GO:0004803 (5.1%) GO:0005524 (3.1%)" "DNA transposition (5.1%) proton transmembrane transport (1.8%) potassium ion transport (1.7%)" "membrane (9%) plasma membrane (5.5%) nucleus (2.9%)" "DNA binding (5.9%) transposase activity (5.1%) ATP binding (3.1%)" "IPR032025 (24.4%) IPR038312 (24.4%) IPR001207 (2.5%)" "Protein of unknown function DUF5063 (24.4%) DUF5063 superfamily (24.4%) Transposase, mutator type (2.5%)" LGYTQLNKDYFDTLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" IGSFIFLGTTGVGKTELAK root "GO:0034605 (17.9%) GO:0042026 (17.3%) GO:0006508 (4.8%)" GO:0005737 (17.9%) "GO:0005524 (18%) GO:0016887 (18%) GO:0008233 (4.8%)" "cellular response to heat (17.9%) protein refolding (17.3%) proteolysis (4.8%)" cytoplasm (17.9%) "ATP binding (18%) ATP hydrolysis activity (18%) peptidase activity (4.8%)" "IPR003959 (8.4%) IPR050130 (8.4%) IPR003593 (8.3%)" "ATPase, AAA-type, core (8.4%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.4%) AAA+ ATPase domain (8.3%)" AAVDAGFVEHDRQIGQTGVTVRPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033539 (33.3%) "GO:0009055 (33.3%) GO:0050660 (33.3%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (33.3%) "electron transfer activity (33.3%) flavin adenine dinucleotide binding (33.3%)" "IPR001308 (16.8%) IPR014729 (16.8%) IPR014730 (16.8%)" "Electron transfer flavoprotein alpha subunit/FixB (16.8%) Rossmann-like alpha/beta/alpha sandwich fold (16.8%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.8%)" ILVRVHSSCMTGDIFGSMR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "3.5.4.25 (50%) 4.1.99.12 (50%)" "GTP cyclohydrolase II (50%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (50%)" GO:0009231 (12.5%) GO:0005829 (12.5%) "GO:0000287 (12.5%) GO:0003935 (12.5%) GO:0005525 (12.5%)" riboflavin biosynthetic process (12.5%) cytosol (12.5%) "magnesium ion binding (12.5%) GTP cyclohydrolase II activity (12.5%) GTP binding (12.5%)" "IPR000422 (16.7%) IPR000926 (16.7%) IPR016299 (16.7%)" "3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB (16.7%) GTP cyclohydrolase II, RibA (16.7%) Riboflavin biosynthesis protein RibBA (16.7%)" QDLSIQVHPTDELAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (32.5%) "GO:0004476 (33.8%) GO:0008270 (33.8%)" carbohydrate metabolic process (32.5%) "mannose-6-phosphate isomerase activity (33.8%) zinc ion binding (33.8%)" "IPR011051 (16.9%) IPR014710 (16.9%) IPR046457 (16.9%)" "RmlC-like cupin domain superfamily (16.9%) RmlC-like jelly roll fold (16.9%) Phosphomannose isomerase type I, catalytic domain (16.9%)" FAAAHSEDDEERFASIPGKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.1.1.173 (100%) 23S rRNA (guanine(2445)-N(2))-methyltransferase (100%) "GO:0003723 (33.3%) GO:0070043 (33.3%) GO:0008990 (27.3%)" "RNA binding (33.3%) rRNA (guanine-N7-)-methyltransferase activity (33.3%) rRNA (guanine-N2-)-methyltransferase activity (27.3%)" "IPR000241 (16.7%) IPR002052 (16.7%) IPR004114 (16.7%)" "Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain (16.7%) DNA methylase, N-6 adenine-specific, conserved site (16.7%) THUMP domain (16.7%)" IILCTGDMGFGACK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 6.1.1.11 (100%) serine--tRNA ligase (100%) "GO:0006434 (20.1%) GO:0016260 (19.2%)" "GO:0005737 (20.1%) GO:0005829 (0%)" "GO:0004828 (20.1%) GO:0005524 (20.1%) GO:0016874 (0.3%)" "seryl-tRNA aminoacylation (20.1%) selenocysteine biosynthetic process (19.2%)" "cytoplasm (20.1%) cytosol (0%)" "serine-tRNA ligase activity (20.1%) ATP binding (20.1%) ligase activity (0.3%)" "IPR002314 (12.7%) IPR002317 (12.7%) IPR045864 (12.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (12.7%) Serine-tRNA ligase, type1 (12.7%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (12.7%)" PLVHIDLIEGR Lactobacillaceae Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae "5.3.2.- (81.7%) 5.3.2.6 (18.3%)" "Interconverting keto- and enol-groups (81.7%) 2-hydroxymuconate tautomerase (18.3%)" GO:0016853 (100%) isomerase activity (100%) "IPR004370 (35.1%) IPR014347 (35.1%) IPR018191 (29.8%)" "4-oxalocrotonate tautomerase-like domain (35.1%) Tautomerase/MIF superfamily (35.1%) 4-oxalocrotonate tautomerase (29.8%)" YLTDIMPAIHAELAEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (46.7%) GO:0016616 (33.3%) GO:0004617 (13.3%)" "NAD binding (46.7%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (33.3%) phosphoglycerate dehydrogenase activity (13.3%)" "IPR006139 (25%) IPR006140 (25%) IPR029752 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 (25%)" FHPSVNISIIK root "1.4.1.4 (98.7%) 1.4.1.2 (1%) 1.-.-.- (0.1%)" "glutamate dehydrogenase (NADP(+)) (98.7%) glutamate dehydrogenase (1%) Oxidoreductases (0.1%)" "GO:0006537 (26.2%) GO:0016539 (0%) GO:0019676 (0%)" "GO:0005829 (26.2%) GO:0009986 (0.1%) GO:0005737 (0%)" "GO:0004354 (26.2%) GO:0000166 (19.8%) GO:0004352 (1.1%)" "glutamate biosynthetic process (26.2%) intein-mediated protein splicing (0%) ammonia assimilation cycle (0%)" "cytosol (26.2%) cell surface (0.1%) cytoplasm (0%)" "glutamate dehydrogenase (NADP+) activity (26.2%) nucleotide binding (19.8%) glutamate dehydrogenase (NAD+) activity (1.1%)" "IPR006097 (12.3%) IPR050724 (12.3%) IPR046346 (12.2%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.3%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (12.3%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (12.2%)" EFYEKPTTER root "GO:0006412 (24.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0005840 (25.1%) GO:1990904 (24.8%) GO:0022627 (0.1%)" "GO:0003735 (24.9%) GO:0016787 (0.2%) GO:0019843 (0%)" "translation (24.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "ribosome (25.1%) ribonucleoprotein complex (24.8%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (24.9%) hydrolase activity (0.2%) rRNA binding (0%)" "IPR001911 (33.6%) IPR038380 (33.6%) IPR018278 (32.8%)" "Small ribosomal subunit protein bS21 (33.6%) Small ribosomal subunit protein bS21 superfamily (33.6%) Small ribosomal subunit protein bS21, conserved site (32.8%)" LVHSEDEMEAAFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "6.3.4.14 (62.5%) 6.4.1.7 (37.5%)" "biotin carboxylase (62.5%) 2-oxoglutarate carboxylase (37.5%)" GO:2001295 (17.1%) "GO:0005524 (22.9%) GO:0046872 (22.9%) GO:0003989 (14.3%)" malonyl-CoA biosynthetic process (17.1%) "ATP binding (22.9%) metal ion binding (22.9%) acetyl-CoA carboxylase activity (14.3%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" ISTNDLKEIIDMIEKGQEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0045892 (50%) GO:0003677 (50%) negative regulation of DNA-templated transcription (50%) DNA binding (50%) "IPR005650 (33.3%) IPR036388 (33.3%) IPR036390 (33.3%)" "BlaI transcriptional regulatory family (33.3%) Winged helix-like DNA-binding domain superfamily (33.3%) Winged helix DNA-binding domain superfamily (33.3%)" VLNEMAADDALSEAVREK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae IPR009624 (100%) Uncharacterised protein family UPF0253 (100%) SNPEMEIDKVTTPGGITIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.5.1.2 (100%) pyrroline-5-carboxylate reductase (100%) GO:0055129 (33.3%) GO:0005737 (33.3%) GO:0004735 (33.3%) L-proline biosynthetic process (33.3%) cytoplasm (33.3%) pyrroline-5-carboxylate reductase activity (33.3%) "IPR000304 (20%) IPR008927 (20%) IPR028939 (20%)" "Pyrroline-5-carboxylate reductase-like (20%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (20%) Pyrroline-5-carboxylate reductase, catalytic, N-terminal (20%)" GVDLGDFPVMTFAEAERR root "6.1.1.12 (99.1%) 6.1.1.- (0.5%) 6.1.1.23 (0.5%)" "aspartate--tRNA ligase (99.1%) Ligases forming aminoacyl-tRNA and related compounds (0.5%) aspartate--tRNA(Asn) ligase (0.5%)" "GO:0006422 (20%) GO:0006418 (0%)" "GO:0005737 (20%) GO:0005829 (0%)" "GO:0005524 (20.1%) GO:0004815 (20%) GO:0003676 (19.5%)" "aspartyl-tRNA aminoacylation (20%) tRNA aminoacylation for protein translation (0%)" "cytoplasm (20%) cytosol (0%)" "ATP binding (20.1%) aspartate-tRNA ligase activity (20%) nucleic acid binding (19.5%)" "IPR004115 (9.2%) IPR004364 (9.2%) IPR045864 (9.2%)" "GAD-like domain superfamily (9.2%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.2%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (9.2%)" ANEELKEIKYEFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.99.18 (88.9%) 4.1.1.21 (11.1%)" "5-(carboxyamino)imidazole ribonucleotide mutase (88.9%) phosphoribosylaminoimidazole carboxylase (11.1%)" GO:0006189 (26.8%) GO:0016020 (25%) "GO:0034023 (26.8%) GO:0016829 (21.4%)" 'de novo' IMP biosynthetic process (26.8%) membrane (25%) "5-(carboxyamino)imidazole ribonucleotide mutase activity (26.8%) lyase activity (21.4%)" "IPR000031 (33.3%) IPR024694 (33.3%) IPR033747 (33.3%)" "PurE domain (33.3%) PurE, prokaryotic type (33.3%) Class I PurE (33.3%)" VIIAMGSVTEAAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (75.9%) 1.2.7.- (22.2%) 1.2.1.51 (1.9%)" "pyruvate synthase (75.9%) With an iron-sulfur protein as acceptor (22.2%) pyruvate dehydrogenase (NADP(+)) (1.9%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (11.8%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.4%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (11.8%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.4%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" DAVEEVKTLVLEGQK Hoskinsella hominis Bacteria Bacillati Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Hoskinsella Hoskinsella hominis GO:0016020 (100%) membrane (100%) "IPR005754 (33.3%) IPR023365 (33.3%) IPR041999 (33.3%)" "Sortase family (33.3%) Sortase domain superfamily (33.3%) Sortase D, type 1 (33.3%)" YDSVHGRFDGEVAVEDGALVVNGNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0016620 (12.5%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (12.5%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" EELERENNHLKEQQNGWQER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0000917 (33.1%) GO:0043093 (33.1%)" "GO:0005737 (32.7%) GO:0005829 (0.4%) GO:0032153 (0.4%)" GO:0042802 (0.4%) "division septum assembly (33.1%) FtsZ-dependent cytokinesis (33.1%)" "cytoplasm (32.7%) cytosol (0.4%) cell division site (0.4%)" identical protein binding (0.4%) IPR009252 (100%) Cell division protein ZapB (100%) IAAVAEDGEPCVTYIGADGAGHYVK root 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25.1%) GO:0019521 (25.1%) GO:0016054 (0.2%)" GO:0005829 (0%) "GO:0004616 (25.1%) GO:0050661 (24%) GO:0016491 (0.2%)" "pentose-phosphate shunt (25.1%) D-gluconate metabolic process (25.1%) organic acid catabolic process (0.2%)" cytosol (0%) "phosphogluconate dehydrogenase (decarboxylating) activity (25.1%) NADP binding (24%) oxidoreductase activity (0.2%)" "IPR006183 (12.8%) IPR006114 (12.8%) IPR008927 (12.8%)" "6-phosphogluconate dehydrogenase (12.8%) 6-phosphogluconate dehydrogenase, C-terminal (12.8%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (12.8%)" DLFADGEAGFRGFTKAKYDLCVLDVMMPK ADPSVIATLELNFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" VVAVVGGGDTACEEALYLSTLAR WQLGTIQVDYNLPER root 6.1.1.3 (100%) threonine--tRNA ligase (100%) "GO:0006435 (16.6%) GO:0006413 (0%) GO:0043039 (0%)" GO:0005737 (16.5%) "GO:0004829 (16.6%) GO:0005524 (16.6%) GO:0046872 (16.5%)" "threonyl-tRNA aminoacylation (16.6%) translational initiation (0%) tRNA aminoacylation (0%)" cytoplasm (16.5%) "threonine-tRNA ligase activity (16.6%) ATP binding (16.6%) metal ion binding (16.5%)" "IPR002314 (7.8%) IPR002320 (7.8%) IPR006195 (7.8%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.8%) Threonine-tRNA ligase, class IIa (7.8%) Aminoacyl-tRNA synthetase, class II (7.8%)" EICGVKLPEGMKENQKFPEPIVTPTTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" EAIEETESNYALLEAEEIHALIKPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "4.2.1.136 (50%) 5.1.99.6 (50%)" "ADP-dependent NAD(P)H-hydrate dehydratase (50%) NAD(P)H-hydrate epimerase (50%)" "GO:0046496 (15.6%) GO:0110051 (15.6%)" "GO:0005524 (15.6%) GO:0046872 (15.6%) GO:0052855 (15.6%)" "nicotinamide nucleotide metabolic process (15.6%) metabolite repair (15.6%)" "ATP binding (15.6%) metal ion binding (15.6%) ADP-dependent NAD(P)H-hydrate dehydratase activity (15.6%)" "IPR000631 (16.7%) IPR004443 (16.7%) IPR017953 (16.7%)" "ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase (16.7%) YjeF N-terminal domain (16.7%) Carbohydrate kinase, predicted, conserved site (16.7%)" YTHEQVMDILQFVQKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" ELGLDAIHDTVHEMCKDEAR Bacteria Bacteria 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (47.9%) GO:0016491 (21%) GO:0004601 (19.2%)" "iron ion binding (47.9%) oxidoreductase activity (21%) peroxidase activity (19.2%)" "IPR009078 (13.2%) IPR052773 (13.2%) IPR012347 (12.9%)" "Ferritin-like superfamily (13.2%) Anaerobic Bacterial Peroxidase-Related (13.2%) Ferritin-like (12.9%)" NGLCTMVAFNKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" GIFSIMNYLNPLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.8%) GO:0005829 (18.8%) "GO:0004612 (18.8%) GO:0005524 (18.8%) GO:0046872 (18%)" gluconeogenesis (18.8%) cytosol (18.8%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.8%) ATP binding (18.8%) metal ion binding (18%)" "IPR001272 (25.7%) IPR008210 (25.7%) IPR013035 (24.6%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.7%) Phosphoenolpyruvate carboxykinase, N-terminal (25.7%) Phosphoenolpyruvate carboxykinase, C-terminal (24.6%)" FVGSLTSDQQKLDSLSK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006355 (32.9%) GO:0000160 (31.4%)" "GO:0005737 (1.1%) GO:0005829 (0.4%) GO:0016020 (0.4%)" "GO:0003677 (33.6%) GO:0043565 (0.4%)" "regulation of DNA-templated transcription (32.9%) phosphorelay signal transduction system (31.4%)" "cytoplasm (1.1%) cytosol (0.4%) membrane (0.4%)" "DNA binding (33.6%) sequence-specific DNA binding (0.4%)" "IPR000792 (17.2%) IPR036388 (17.2%) IPR016032 (17.1%)" "Transcription regulator LuxR, C-terminal (17.2%) Winged helix-like DNA-binding domain superfamily (17.2%) Signal transduction response regulator, C-terminal effector (17.1%)" VLDLIAHISK root "1.2.1.- (89.1%) 1.2.1.12 (10.9%)" "With NAD(+) or NADP(+) as acceptor (89.1%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (10.9%)" "GO:0006006 (20.7%) GO:0072524 (15.4%) GO:0006096 (0.3%)" "GO:0005737 (0.2%) GO:0005576 (0%) GO:0005829 (0%)" "GO:0051287 (20.8%) GO:0050661 (20.7%) GO:0004365 (15.8%)" "glucose metabolic process (20.7%) pyridine-containing compound metabolic process (15.4%) glycolytic process (0.3%)" "cytoplasm (0.2%) extracellular region (0%) cytosol (0%)" "NAD binding (20.8%) NADP binding (20.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (15.8%)" "IPR020831 (17.1%) IPR020829 (17.1%) IPR020830 (16.6%)" "Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.1%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.1%) Glyceraldehyde 3-phosphate dehydrogenase, active site (16.6%)" FAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 6.1.1.11 (100%) serine--tRNA ligase (100%) "GO:0006434 (20%) GO:0016260 (18.3%) GO:0006412 (0.2%)" "GO:0005737 (19.8%) GO:0005829 (0.2%)" "GO:0004828 (20.2%) GO:0005524 (20%) GO:0016874 (0.6%)" "seryl-tRNA aminoacylation (20%) selenocysteine biosynthetic process (18.3%) translation (0.2%)" "cytoplasm (19.8%) cytosol (0.2%)" "serine-tRNA ligase activity (20.2%) ATP binding (20%) ligase activity (0.6%)" "IPR045864 (12.9%) IPR002314 (12.8%) IPR002317 (12.8%)" "Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (12.9%) Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (12.8%) Serine-tRNA ligase, type1 (12.8%)" VGEWVLAVGNPFNLTSTVTAGIVSAK Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.4.21.107 (74.4%) 3.4.21.- (16.3%) 3.4.21.108 (9.3%)" "peptidase Do (74.4%) Serine endopeptidases (16.3%) HtrA2 peptidase (9.3%)" "GO:0006508 (46.5%) GO:0006515 (0.3%)" "GO:0016020 (4.8%) GO:0042597 (1.5%)" "GO:0004252 (46.5%) GO:0003676 (0.3%) GO:0008233 (0.3%)" "proteolysis (46.5%) protein quality control for misfolded or incompletely synthesized proteins (0.3%)" "membrane (4.8%) periplasmic space (1.5%)" "serine-type endopeptidase activity (46.5%) nucleic acid binding (0.3%) peptidase activity (0.3%)" "IPR009003 (19.7%) IPR001940 (19.6%) IPR001478 (19.5%)" "Peptidase S1, PA clan (19.7%) Peptidase S1C (19.6%) PDZ domain (19.5%)" KVDEQNEKGTHNVIK Actinomycetes Bacteria Bacillati Actinomycetota Actinomycetes "GO:0006412 (16.8%) GO:0000028 (16.5%)" "GO:0005737 (16.5%) GO:0015935 (16.5%) GO:0005840 (0.3%)" "GO:0003735 (16.8%) GO:0019843 (16.5%)" "translation (16.8%) ribosomal small subunit assembly (16.5%)" "cytoplasm (16.5%) small ribosomal subunit (16.5%) ribosome (0.3%)" "structural constituent of ribosome (16.8%) rRNA binding (16.5%)" "IPR002222 (25.2%) IPR023575 (25.2%) IPR005732 (24.8%)" "Small ribosomal subunit protein uS19 (25.2%) Small ribosomal subunit protein uS19, superfamily (25.2%) Small ribosomal subunit protein uS19, bacteria (24.8%)" TVIVTDEYAGRDGASQSLADADAK Clostridia Bacteria Bacillati Bacillota Clostridia 1.21.4.2 (100%) glycine reductase (100%) "GO:0050485 (66.7%) GO:0030699 (33.3%)" "oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor (66.7%) glycine reductase activity (33.3%)" "IPR015417 (50%) IPR016585 (50%)" "Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta (50%) Glycine/sarcosine/betaine reductase, component B, fused alpha/beta (50%)" LKDTHPGSTVTILTMGPGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0009055 (97%) GO:0016491 (3%)" "electron transfer activity (97%) oxidoreductase activity (3%)" "IPR000049 (20%) IPR012255 (20%) IPR014729 (20%)" "Electron transfer flavoprotein, beta-subunit, conserved site (20%) Electron transfer flavoprotein, beta subunit (20%) Rossmann-like alpha/beta/alpha sandwich fold (20%)" FLNTDKLPFLIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides EGITPQDVVDRYHTLIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0004825 (16.7%) GO:0005524 (16.7%) GO:0000049 (16.4%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "methionine-tRNA ligase activity (16.7%) ATP binding (16.7%) tRNA binding (16.4%)" "IPR001412 (8.4%) IPR014758 (8.4%) IPR015413 (8.4%)" "Aminoacyl-tRNA synthetase, class I, conserved site (8.4%) Methionyl-tRNA synthetase (8.4%) Methionyl/Leucyl tRNA synthetase (8.4%)" LTAEQYAVTQQNATER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.8.4.12 (58.1%) 1.8.4.11 (41.9%)" "peptide-methionine (R)-S-oxide reductase (58.1%) peptide-methionine (S)-S-oxide reductase (41.9%)" "GO:0006979 (19.8%) GO:0030091 (19.8%)" GO:0005737 (19.8%) "GO:0033743 (19.8%) GO:0008113 (14.3%) GO:0033744 (6.6%)" "response to oxidative stress (19.8%) protein repair (19.8%)" cytoplasm (19.8%) "peptide-methionine (R)-S-oxide reductase activity (19.8%) peptide-methionine (S)-S-oxide reductase activity (14.3%) L-methionine (S)-S-oxide reductase activity (6.6%)" "IPR002579 (22.5%) IPR011057 (22.5%) IPR028427 (22.5%)" "Peptide methionine sulphoxide reductase MrsB domain (22.5%) Mss4-like superfamily (22.5%) Peptide methionine sulfoxide reductase MsrB (22.5%)" IETGIVKVGEEVQIIGLGAAGKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20.5%) "GO:0003746 (20.5%) GO:0003924 (20.5%) GO:0005525 (20.5%)" cytosol (20.5%) "translation elongation factor activity (20.5%) GTPase activity (20.5%) GTP binding (20.5%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" VFPTGGPITMPVGEQIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "7.1.2.2 (94.1%) 3.6.3.14 (5.9%)" "H(+)-transporting two-sector ATPase (94.1%) Transferred entry: 7.1.2.2 (5.9%)" "GO:0005886 (21.3%) GO:0045259 (21.3%)" "GO:0005524 (21.3%) GO:0046933 (21.3%) GO:0016787 (12%)" "plasma membrane (21.3%) proton-transporting ATP synthase complex (21.3%)" "ATP binding (21.3%) proton-transporting ATP synthase activity, rotational mechanism (21.3%) hydrolase activity (12%)" "IPR000194 (10%) IPR003593 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" GHTVYIQHTAGINSGFSDEEYEKVGAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.1.1 (100%) alanine dehydrogenase (100%) GO:0042853 (25.6%) GO:0005886 (25.6%) "GO:0000286 (25.6%) GO:0000166 (23.3%)" L-alanine catabolic process (25.6%) plasma membrane (25.6%) "alanine dehydrogenase activity (25.6%) nucleotide binding (23.3%)" "IPR007698 (20%) IPR007886 (20%) IPR008141 (20%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (20%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (20%) Alanine dehydrogenase (20%)" MLNIVIFGAPGSGKGTQSER Bacteria Bacteria "2.7.4.3 (96.7%) 2.7.4.- (3.3%)" "adenylate kinase (96.7%) Phosphotransferases with a phosphate group as acceptor (3.3%)" "GO:0044209 (23.5%) GO:0006139 (0.6%) GO:0009123 (0.3%)" "GO:0005737 (24%) GO:0005829 (0.3%)" "GO:0005524 (25.2%) GO:0004017 (24.3%) GO:0019205 (0.9%)" "AMP salvage (23.5%) nucleobase-containing compound metabolic process (0.6%) nucleoside monophosphate metabolic process (0.3%)" "cytoplasm (24%) cytosol (0.3%)" "ATP binding (25.2%) AMP kinase activity (24.3%) nucleobase-containing compound kinase activity (0.9%)" "IPR000850 (31.4%) IPR027417 (31.4%) IPR033690 (31%)" "Adenylate kinase/UMP-CMP kinase (31.4%) P-loop containing nucleoside triphosphate hydrolase (31.4%) Adenylate kinase, conserved site (31%)" WHLDSGLVVIPK root "1.1.1.274 (79.5%) 1.1.1.- (12.3%) 1.1.1.346 (6.6%)" "2,5-didehydrogluconate reductase (2-dehydro-D-gluconate-forming) (79.5%) With NAD(+) or NADP(+) as acceptor (12.3%) 2,5-didehydrogluconate reductase (2-dehydro-L-gulonate-forming) (6.6%)" "GO:0019853 (48.8%) GO:0034220 (0.1%) GO:0051596 (0.1%)" "GO:0005737 (0.1%) GO:0005829 (0.1%) GO:0043190 (0.1%)" "GO:0016616 (24.9%) GO:0050580 (24.2%) GO:0016491 (0.6%)" "L-ascorbic acid biosynthetic process (48.8%) monoatomic ion transmembrane transport (0.1%) methylglyoxal catabolic process (0.1%)" "cytoplasm (0.1%) cytosol (0.1%) ATP-binding cassette (ABC) transporter complex (0.1%)" "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (24.9%) 2,5-didehydrogluconate reductase activity (24.2%) oxidoreductase activity (0.6%)" "IPR018170 (23%) IPR020471 (23%) IPR023210 (23%)" "Aldo/keto reductase, conserved site (23%) Aldo-keto reductase (23%) NADP-dependent oxidoreductase domain (23%)" SGPLGGDQQIGSR Bacteria Bacteria 4.2.3.3 (100%) methylglyoxal synthase (100%) GO:0019242 (33.3%) GO:0005829 (33.3%) GO:0008929 (33.3%) methylglyoxal biosynthetic process (33.3%) cytosol (33.3%) methylglyoxal synthase activity (33.3%) "IPR004363 (25%) IPR011607 (25%) IPR018148 (25%)" "Methylglyoxal synthase (25%) Methylglyoxal synthase-like domain (25%) Methylglyoxal synthase, active site (25%)" VAQIYACAGANR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.1%) IPR000795 (7.1%) IPR005225 (7.1%)" "Elongation factor EFG, domain V-like (7.1%) Translational (tr)-type GTP-binding domain (7.1%) Small GTP-binding domain (7.1%)" AQGIDVINLSVGEPDFNTPDFIKEAAKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" GLHPESYRPVVFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR002150 (25.3%) IPR034704 (25.3%) IPR027493 (24.7%)" "Large ribosomal subunit protein bL31 type A/B (25.3%) Large ribosomal subunit protein bL28/bL31-like superfamily (25.3%) Large ribosomal subunit protein bL31 type B (24.7%)" HLSGMAVDAVMDSVSVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR010231 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufB (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" NLLPLIIANGGVDKIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (71.4%) GO:0004340 (28.6%)" "kinase activity (71.4%) glucokinase activity (28.6%)" "IPR000600 (33.3%) IPR043129 (33.3%) IPR049874 (33.3%)" "ROK family (33.3%) ATPase, nucleotide binding domain (33.3%) ROK, conserved site (33.3%)" ILDPRDTYADAAQWDEKAK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.6%) GO:0005829 (17.6%) "GO:0004612 (17.6%) GO:0005524 (17.6%) GO:0046872 (16.1%)" gluconeogenesis (17.6%) cytosol (17.6%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.6%) ATP binding (17.6%) metal ion binding (16.1%)" "IPR001272 (26.1%) IPR013035 (26.1%) IPR008210 (23.9%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (26.1%) Phosphoenolpyruvate carboxykinase, C-terminal (26.1%) Phosphoenolpyruvate carboxykinase, N-terminal (23.9%)" SVGIHLEPGPDGGLVMIDDTTVLDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0003677 (100%) DNA binding (100%) IQSIHFDATEQLQAFIQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR003489 (50%) IPR036567 (50%)" "Ribosome hibernation promoting factor/RaiA (50%) Ribosome hibernation promotion factor-like (50%)" ILIPASAHGTNPASAIQCGYTTVTCACDDKGNVDVEDLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" QWGSVTPGHPEVDVMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (13%) IPR005475 (13%) IPR009014 (13%)" "Transketolase, N-terminal (13%) Transketolase-like, pyrimidine-binding domain (13%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (13%)" QLSIADMFAETIKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11%) GO:0006164 (11%) GO:0009156 (11%)" "GO:0002189 (11%) GO:0005737 (11%)" "GO:0000287 (11.2%) GO:0004749 (11.2%) GO:0016301 (11.2%)" "5-phosphoribose 1-diphosphate biosynthetic process (11%) purine nucleotide biosynthetic process (11%) ribonucleoside monophosphate biosynthetic process (11%)" "ribose phosphate diphosphokinase complex (11%) cytoplasm (11%)" "magnesium ion binding (11.2%) ribose phosphate diphosphokinase activity (11.2%) kinase activity (11.2%)" "IPR005946 (20.1%) IPR029057 (20.1%) IPR000836 (19.9%)" "Ribose-phosphate pyrophosphokinase (20.1%) Phosphoribosyltransferase-like (20.1%) Phosphoribosyltransferase domain (19.9%)" KAGYYTASSQWDAQKEQDVVVGVFR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.22 (100%) UDP-glucose 6-dehydrogenase (100%) "GO:0000271 (28.6%) GO:0006065 (14.3%)" "GO:0003979 (28.6%) GO:0051287 (28.6%)" "polysaccharide biosynthetic process (28.6%) UDP-glucuronate biosynthetic process (14.3%)" "UDP-glucose 6-dehydrogenase activity (28.6%) NAD binding (28.6%)" "IPR001732 (11.1%) IPR008927 (11.1%) IPR013328 (11.1%)" "UDP-glucose/GDP-mannose dehydrogenase, N-terminal (11.1%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (11.1%) 6-phosphogluconate dehydrogenase, domain 2 (11.1%)" MGLLMKEEDVAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" INREYAEMFQDYTANK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006352 (16.7%) GO:0000428 (16.7%) "GO:0001216 (16.7%) GO:0003677 (16.7%) GO:0016779 (16.7%)" DNA-templated transcription initiation (16.7%) DNA-directed RNA polymerase complex (16.7%) "DNA-binding transcription activator activity (16.7%) DNA binding (16.7%) nucleotidyltransferase activity (16.7%)" "IPR000394 (25%) IPR007046 (25%) IPR007634 (25%)" "RNA polymerase sigma factor 54 (25%) RNA polymerase sigma factor 54, core-binding domain (25%) RNA polymerase sigma factor 54, DNA-binding (25%)" FATDAVEGKPTYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.1.96 (100%) carboxynorspermidine decarboxylase (100%) "GO:0008295 (25%) GO:0009089 (25%) GO:0045312 (25%)" GO:0008836 (25%) "spermidine biosynthetic process (25%) lysine biosynthetic process via diaminopimelate (25%) nor-spermidine biosynthetic process (25%)" diaminopimelate decarboxylase activity (25%) "IPR005730 (25%) IPR009006 (25%) IPR022643 (25%)" "Carboxynorspermidine decarboxylase (25%) Alanine racemase/group IV decarboxylase, C-terminal (25%) Orn/DAP/Arg decarboxylase 2, C-terminal (25%)" VIQINGNDVNEIRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" LEGVLKEDFVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.3%) GO:0005737 (19.6%) "GO:0004816 (20.3%) GO:0005524 (20.3%) GO:0003676 (19.6%)" asparaginyl-tRNA aminoacylation (20.3%) cytoplasm (19.6%) "asparagine-tRNA ligase activity (20.3%) ATP binding (20.3%) nucleic acid binding (19.6%)" "IPR002312 (14.4%) IPR004364 (14.4%) IPR004522 (14.4%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.4%) Aminoacyl-tRNA synthetase, class II (D/K/N) (14.4%) Asparagine-tRNA ligase (14.4%)" ALKDIDIDDNAFK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) "GO:0048500 (19.3%) GO:0005786 (0.6%)" "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (20%)" SRP-dependent cotranslational protein targeting to membrane (20%) "signal recognition particle (19.3%) signal recognition particle, endoplasmic reticulum targeting (0.6%)" "GTPase activity (20%) GTP binding (20%) 7S RNA binding (20%)" "IPR004125 (11.3%) IPR022941 (11.3%) IPR036891 (11.3%)" "Signal recognition particle, SRP54 subunit, M-domain (11.3%) Signal recognition particle, SRP54 subunit (11.3%) Signal recognition particle, SRP54 subunit, M-domain superfamily (11.3%)" GDLDSPVPMVADMSSDIFSRPVDVSK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (20%) IPR015421 (20%) IPR015422 (20%)" "Aminotransferase class V domain (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" KKATAAVTEAPAAEAASEEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.3%) IPR036373 (33.3%) IPR047859 (33.3%)" "Large ribosomal subunit protein bL17 (33.3%) Large ribosomal subunit protein bL17 superfamily (33.3%) Large ribosomal subunit protein bL17, conserved site (33.3%)" IVQSPDVIPADSEAGR Bacteria Bacteria GO:0006950 (100%) response to stress (100%) "IPR025543 (20.3%) IPR051096 (20.3%) IPR010854 (20.1%)" "Dodecin-like (20.3%) BhsA/McbA stress and biofilm-associated protein (20.3%) YdgH/BhsA/McbA-like domain (20.1%)" LIHSEDEVVEAYNTAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.4.14 (100%) biotin carboxylase (100%) GO:2001295 (15.6%) "GO:0005524 (23.3%) GO:0046872 (23.3%) GO:0003989 (14.4%)" malonyl-CoA biosynthetic process (15.6%) "ATP binding (23.3%) metal ion binding (23.3%) acetyl-CoA carboxylase activity (14.4%)" "IPR005479 (12.8%) IPR011761 (12.8%) IPR011764 (12.8%)" "Carbamoyl phosphate synthase, ATP-binding domain (12.8%) ATP-grasp fold (12.8%) Biotin carboxylation domain (12.8%)" NFIGTHTIQEFVESIERPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" TPPVAIQLLEATK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (14.6%) IPR006519 (14.6%) IPR020783 (14.6%)" "Ribosomal protein uL11 (14.6%) Large ribosomal subunit protein uL11, bacteria (14.6%) Large ribosomal subunit protein uL11, C-terminal (14.6%)" YGVDYNITFSEQKPSTDTIAADMENQPFRDNGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" AAGLYKNER root 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (13.1%) GO:0030148 (13.1%) GO:0006567 (0.8%)" "GO:0016020 (13.9%) GO:0005829 (13.6%) GO:0005737 (0.5%)" "GO:0008890 (14.2%) GO:0030170 (14.2%) GO:0016874 (7.4%)" "L-threonine catabolic process to glycine (13.1%) sphingolipid biosynthetic process (13.1%) L-threonine catabolic process (0.8%)" "membrane (13.9%) cytosol (13.6%) cytoplasm (0.5%)" "glycine C-acetyltransferase activity (14.2%) pyridoxal phosphate binding (14.2%) ligase activity (7.4%)" "IPR015422 (16.8%) IPR004839 (16.5%) IPR015421 (16.5%)" "Pyridoxal phosphate-dependent transferase, small domain (16.8%) Aminotransferase, class I/classII, large domain (16.5%) Pyridoxal phosphate-dependent transferase, major domain (16.5%)" DIKRPFTAIMGGSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.2%) IPR015824 (33.2%) IPR036043 (33.2%)" "Phosphoglycerate kinase (33.2%) Phosphoglycerate kinase, N-terminal (33.2%) Phosphoglycerate kinase superfamily (33.2%)" SFELPALPYAK root 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0000303 (0%) GO:0006801 (0%) GO:0019430 (0%)" "GO:0005737 (32.2%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0004784 (33.6%) GO:0046914 (31.9%) GO:0046872 (1.7%)" "response to superoxide (0%) superoxide metabolic process (0%) removal of superoxide radicals (0%)" "cytoplasm (32.2%) cytosol (0%) membrane (0%)" "superoxide dismutase activity (33.6%) transition metal ion binding (31.9%) metal ion binding (1.7%)" "IPR001189 (16.9%) IPR019831 (16.9%) IPR036324 (16.9%)" "Manganese/iron superoxide dismutase (16.9%) Manganese/iron superoxide dismutase, N-terminal (16.9%) Manganese/iron superoxide dismutase, N-terminal domain superfamily (16.9%)" YSPVAGYPALR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" IEEYFPVKDENAEYDPMLQR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.1%) GO:0006164 (1.2%)" GO:0005737 (20.2%) "GO:0004642 (20.2%) GO:0005524 (20.2%) GO:0046872 (19.1%)" "'de novo' IMP biosynthetic process (19.1%) purine nucleotide biosynthetic process (1.2%)" cytoplasm (20.2%) "phosphoribosylformylglycinamidine synthase activity (20.2%) ATP binding (20.2%) metal ion binding (19.1%)" "IPR036604 (11.5%) IPR040707 (11.5%) IPR041609 (11.5%)" "Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily (11.5%) Phosphoribosylformylglycinamidine synthase, N-terminal (11.5%) Phosphoribosylformylglycinamidine synthase, linker domain (11.5%)" LATLPTYEEAIAR root "GO:0006412 (24.7%) GO:0006417 (0.1%) GO:0002181 (0%)" "GO:0015934 (24.4%) GO:0005840 (0.9%) GO:1990904 (0.4%)" "GO:0070180 (24.7%) GO:0003735 (24.5%) GO:0019843 (0%)" "translation (24.7%) regulation of translation (0.1%) cytoplasmic translation (0%)" "large ribosomal subunit (24.4%) ribosome (0.9%) ribonucleoprotein complex (0.4%)" "large ribosomal subunit rRNA binding (24.7%) structural constituent of ribosome (24.5%) rRNA binding (0%)" "IPR043141 (20.1%) IPR047865 (20.1%) IPR001790 (20.1%)" "Large ribosomal subunit protein uL10-like domain superfamily (20.1%) Large ribosomal subunit protein uL10, bacteria/organella (20.1%) Large ribosomal subunit protein uL10 (20.1%)" TAVGQTIQIGSGITK root 3.4.24.- (100%) Metalloendopeptidases (100%) "GO:0000917 (14.2%) GO:0043093 (13.6%) GO:0051258 (13.6%)" "GO:0005737 (14.5%) GO:0032153 (14.5%) GO:0005886 (0%)" "GO:0003924 (14.5%) GO:0005525 (14.5%) GO:0016787 (0%)" "division septum assembly (14.2%) FtsZ-dependent cytokinesis (13.6%) protein polymerization (13.6%)" "cytoplasm (14.5%) cell division site (14.5%) plasma membrane (0%)" "GTPase activity (14.5%) GTP binding (14.5%) hydrolase activity (0%)" "IPR003008 (11.5%) IPR036525 (11.5%) IPR045061 (11.5%)" "Tubulin/FtsZ, GTPase domain (11.5%) Tubulin/FtsZ, GTPase domain superfamily (11.5%) Tubulin-like protein FtsZ/CetZ (11.5%)" SAVAKNPALAKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" NIIGDRPINYLIINHMEPDHSGSIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0009055 (25%) GO:0010181 (25%) GO:0016491 (25%)" "electron transfer activity (25%) FMN binding (25%) oxidoreductase activity (25%)" "IPR001279 (14.1%) IPR008254 (14.1%) IPR016440 (14.1%)" "Metallo-beta-lactamase (14.1%) Flavodoxin/nitric oxide synthase (14.1%) Rubredoxin-oxygen oxidoreductase (14.1%)" TEEEGLAMIRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0015977 (23%) GO:0009317 (23%) "GO:0003989 (23%) GO:0004658 (23%) GO:0016740 (8.2%)" carbon fixation (23%) acetyl-CoA carboxylase complex (23%) "acetyl-CoA carboxylase activity (23%) propionyl-CoA carboxylase activity (23%) transferase activity (8.2%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" IFESEEIQNIYR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (13%) GO:0006261 (12%)" "GO:0005694 (12%) GO:0005737 (12%)" "GO:0003677 (13%) GO:0005524 (13%) GO:0034335 (12%)" "DNA topological change (13%) DNA-templated DNA replication (12%)" "chromosome (12%) cytoplasm (12%)" "DNA binding (13%) ATP binding (13%) DNA negative supercoiling activity (12%)" "IPR000565 (7.7%) IPR001241 (7.7%) IPR006171 (7.7%)" "DNA topoisomerase, type IIA, subunit B (7.7%) DNA topoisomerase, type IIA (7.7%) TOPRIM domain (7.7%)" ESNDYPTVQVNDGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR025112 (50%) IPR038653 (50%)" "Putative carbohydrate metabolism domain (50%) Putative carbohydrate metabolism domain superfamily (50%)" QYTGYKDMPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (17%) "GO:0005840 (17.2%) GO:1990904 (17%) GO:0005737 (16.6%)" "GO:0003735 (17%) GO:0019843 (15%)" translation (17%) "ribosome (17.2%) ribonucleoprotein complex (17%) cytoplasm (16.6%)" "structural constituent of ribosome (17%) rRNA binding (15%)" "IPR000630 (35.2%) IPR035987 (35.2%) IPR047863 (29.5%)" "Small ribosomal subunit protein uS8 (35.2%) Small ribosomal subunit protein uS8 superfamily (35.2%) Small ribosomal subunit protein uS8, conserved site (29.5%)" TADEILVVAHGNSLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.11 (97.9%) 5.4.2.1 (2.1%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (97.9%) Transferred entry: 5.4.2.11 and 5.4.2.12 (2.1%)" "GO:0006094 (33.3%) GO:0006096 (33.3%)" "GO:0004619 (32.6%) GO:0016868 (0.8%)" "gluconeogenesis (33.3%) glycolytic process (33.3%)" "phosphoglycerate mutase activity (32.6%) intramolecular phosphotransferase activity (0.8%)" "IPR005952 (25.3%) IPR013078 (25.3%) IPR029033 (25.3%)" "Phosphoglycerate mutase 1 (25.3%) Histidine phosphatase superfamily, clade-1 (25.3%) Histidine phosphatase superfamily (25.3%)" IFMGLATIFLER root 6.2.1.5 (100%) succinate--CoA ligase (ADP-forming) (100%) "GO:0006099 (13.6%) GO:0006104 (13.6%) GO:0006086 (0%)" "GO:0042709 (13.6%) GO:0005829 (13.6%) GO:0005737 (0%)" "GO:0004775 (13.7%) GO:0005524 (13.3%) GO:0000287 (12.9%)" "tricarboxylic acid cycle (13.6%) succinyl-CoA metabolic process (13.6%) pyruvate decarboxylation to acetyl-CoA (0%)" "succinate-CoA ligase complex (13.6%) cytosol (13.6%) cytoplasm (0%)" "succinate-CoA ligase (ADP-forming) activity (13.7%) ATP binding (13.3%) magnesium ion binding (12.9%)" "IPR013650 (14.6%) IPR016102 (14.3%) IPR005811 (14.2%)" "ATP-grasp fold, succinyl-CoA synthetase-type (14.6%) Succinyl-CoA synthetase-like (14.3%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.2%)" LKNDVFNALHEIEADAELAVVEAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016020 (100%) membrane (100%) SAEIKDLSPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" DNPNLMIITDDVYGTFSPHFR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "4.1.1.12 (88.3%) 2.6.1.1 (10%) 2.6.1.- (1.7%)" "aspartate 4-decarboxylase (88.3%) aspartate transaminase (10%) Transaminases (1.7%)" GO:0006520 (26.6%) "GO:0030170 (26.6%) GO:0008483 (24.2%) GO:0047688 (17.6%)" amino acid metabolic process (26.6%) "pyridoxal phosphate binding (26.6%) transaminase activity (24.2%) aspartate 4-decarboxylase activity (17.6%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" GTSTKFENDDWNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006811 (25%) "GO:0009279 (25%) GO:0046930 (25%)" GO:0015288 (25%) monoatomic ion transport (25%) "cell outer membrane (25%) pore complex (25%)" porin activity (25%) "IPR006664 (19.4%) IPR006665 (19.4%) IPR011250 (19.4%)" "Outer membrane protein, bacterial (19.4%) OmpA-like domain (19.4%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (19.4%)" LKEVAQDAENANKQELDGLKQTFYK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR007139 (100%) Protein of unknown function DUF349 (100%) VQFNNAIGPYK Bacteria Bacteria "1.4.1.4 (89.6%) 1.4.1.2 (9.4%) 1.4.1.- (1%)" "glutamate dehydrogenase (NADP(+)) (89.6%) glutamate dehydrogenase (9.4%) With NAD(+) or NADP(+) as acceptor (1%)" GO:0006537 (24.2%) "GO:0005829 (24.2%) GO:0009986 (0.9%)" "GO:0004354 (24.2%) GO:0000166 (20.9%) GO:0004352 (5.4%)" glutamate biosynthetic process (24.2%) "cytosol (24.2%) cell surface (0.9%)" "glutamate dehydrogenase (NADP+) activity (24.2%) nucleotide binding (20.9%) glutamate dehydrogenase (NAD+) activity (5.4%)" "IPR006097 (11.6%) IPR046346 (11.6%) IPR050724 (11.6%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.6%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.6%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.6%)" EKLDNLVFVINCNLQR Bacteria Bacteria 1.2.4.1 (100%) pyruvate dehydrogenase (acetyl-transferring) (100%) GO:0042867 (0%) "GO:0005829 (0%) GO:0016020 (0%) GO:0045254 (0%)" "GO:0000287 (41.6%) GO:0004739 (41.4%) GO:0016491 (9.5%)" pyruvate catabolic process (0%) "cytosol (0%) membrane (0%) pyruvate dehydrogenase complex (0%)" "magnesium ion binding (41.6%) pyruvate dehydrogenase (acetyl-transferring) activity (41.4%) oxidoreductase activity (9.5%)" "IPR051157 (12.7%) IPR029061 (12.7%) IPR005474 (12.6%)" "Pyruvate Dehydrogenase/Transketolase (12.7%) Thiamin diphosphate-binding fold (12.7%) Transketolase, N-terminal (12.6%)" VDAMDAATEMKNEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.7.1 (66.7%) 1.2.7.3 (33.3%)" "pyruvate synthase (66.7%) 2-oxoglutarate synthase (33.3%)" "GO:0016903 (90%) GO:0019164 (10%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (90%) pyruvate synthase activity (10%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" KMDTMNAQEWCDAFMQGIENENR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.7%) IPR012910 (12.7%) IPR023996 (12.7%)" "TonB-dependent receptor-like, beta-barrel (12.7%) TonB-dependent receptor, plug domain (12.7%) TonB-dependent outer membrane protein, SusC/RagA (12.7%)" VVNTLGAPIDGK root "7.1.2.2 (96.4%) 3.6.3.14 (3.5%) 3.6.3.- (0.1%)" "H(+)-transporting two-sector ATPase (96.4%) Transferred entry: 7.1.2.2 (3.5%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (0.1%)" "GO:0015986 (0%) GO:0042777 (0%)" "GO:0045259 (19.1%) GO:0005886 (18.8%) GO:0005739 (0%)" "GO:0005524 (19.1%) GO:0046933 (19.1%) GO:0043531 (19.1%)" "proton motive force-driven ATP synthesis (0%) proton motive force-driven plasma membrane ATP synthesis (0%)" "proton-transporting ATP synthase complex (19.1%) plasma membrane (18.8%) mitochondrion (0%)" "ATP binding (19.1%) proton-transporting ATP synthase activity, rotational mechanism (19.1%) ADP binding (19.1%)" "IPR005294 (10.2%) IPR027417 (10.2%) IPR000194 (10.1%)" "ATP synthase, F1 complex, alpha subunit (10.2%) P-loop containing nucleoside triphosphate hydrolase (10.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%)" GLAEDASDEEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (31.9%) IPR015824 (31.9%) IPR036043 (31.9%)" "Phosphoglycerate kinase (31.9%) Phosphoglycerate kinase, N-terminal (31.9%) Phosphoglycerate kinase superfamily (31.9%)" GKHKAEYTPHVDTGDYIIVLNADKVAVTGNK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.8%) GO:0017148 (19.8%) GO:0002181 (0%)" "GO:0022625 (19.8%) GO:0005840 (0.6%) GO:0005737 (0.1%)" "GO:0003735 (19.9%) GO:0003729 (19.8%) GO:0008270 (0%)" "translation (19.8%) negative regulation of translation (19.8%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (19.8%) ribosome (0.6%) cytoplasm (0.1%)" "structural constituent of ribosome (19.9%) mRNA binding (19.8%) zinc ion binding (0%)" "IPR005822 (25%) IPR005823 (25%) IPR036899 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13 superfamily (25%)" TPPVAIQLLELAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (16.4%) IPR006519 (16.4%) IPR020783 (16.4%)" "Ribosomal protein uL11 (16.4%) Large ribosomal subunit protein uL11, bacteria (16.4%) Large ribosomal subunit protein uL11, C-terminal (16.4%)" ADEIPQAEKDELSDVEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005524 (24.4%) GO:0016887 (24.4%) GO:0051082 (24.4%)" "ATP binding (24.4%) ATP hydrolysis activity (24.4%) unfolded protein binding (24.4%)" "IPR001404 (20%) IPR019805 (20%) IPR020568 (20%)" "Heat shock protein Hsp90 family (20%) Heat shock protein Hsp90, conserved site (20%) Ribosomal protein uS5 domain 2-type superfamily (20%)" SVLITGGTGSFGKK Bacteria Bacteria "4.2.1.115 (82.4%) 4.2.1.- (13.7%) 5.1.3.2 (3.9%)" "UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (82.4%) Hydro-lyases (13.7%) UDP-glucose 4-epimerase (3.9%)" "GO:0016829 (95.5%) GO:0003978 (4.5%)" "lyase activity (95.5%) UDP-glucose 4-epimerase activity (4.5%)" "IPR003869 (25.1%) IPR036291 (25.1%) IPR051203 (25.1%)" "Polysaccharide biosynthesis protein, CapD-like domain (25.1%) NAD(P)-binding domain superfamily (25.1%) Polysaccharide Synthase-Related Protein (25.1%)" QTFIEPTETYEVYR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.4.1.25 (100%) 4-alpha-glucanotransferase (100%) GO:0005975 (24.7%) GO:0005737 (24.7%) "GO:0004134 (24.7%) GO:2001070 (24.7%) GO:0016757 (1.1%)" carbohydrate metabolic process (24.7%) cytoplasm (24.7%) "4-alpha-glucanotransferase activity (24.7%) starch binding (24.7%) glycosyltransferase activity (1.1%)" "IPR002044 (16.7%) IPR003385 (16.7%) IPR013783 (16.7%)" "Carbohydrate binding module family 20 (16.7%) Glycoside hydrolase, family 77 (16.7%) Immunoglobulin-like fold (16.7%)" VDGKPLTELIGTDALTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (37.5%) "GO:0016615 (25%) GO:0016616 (25%) GO:0030060 (12.5%)" malate metabolic process (37.5%) "malate dehydrogenase activity (25%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (25%) L-malate dehydrogenase (NAD+) activity (12.5%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" YACDVTVVTPEKEVNGK Collinsella aerofaciens Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella aerofaciens 2.7.11.- (100%) Protein-serine/threonine kinases (100%) GO:0009401 (42.9%) GO:0005737 (42.9%) GO:0016740 (14.3%) phosphoenolpyruvate-dependent sugar phosphotransferase system (42.9%) cytoplasm (42.9%) transferase activity (14.3%) "IPR000032 (33.3%) IPR035895 (33.3%) IPR050399 (33.3%)" "Phosphocarrier protein HPr-like (33.3%) HPr-like superfamily (33.3%) Phosphocarrier protein HPr (33.3%)" AVDKVMNDIQRPFTAIMGGSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" LVEAGVPAALAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" HITIGLDCASSEFYHDGIYDYTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.9%) IPR020809 (16.9%) IPR020810 (16.9%)" "Enolase (16.9%) Enolase, conserved site (16.9%) Enolase, C-terminal TIM barrel domain (16.9%)" VFTHTAMSNAKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.1.15 (100%) glutamate decarboxylase (100%) GO:0006538 (25%) GO:0005829 (25%) "GO:0004351 (25%) GO:0030170 (25%)" L-glutamate catabolic process (25%) cytosol (25%) "glutamate decarboxylase activity (25%) pyridoxal phosphate binding (25%)" "IPR002129 (25%) IPR010107 (25%) IPR015421 (25%)" "Pyridoxal phosphate-dependent decarboxylase (25%) Glutamate decarboxylase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%)" GMEFGGSILRPEATGFGALYFVHQMLETHGIDIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (25.6%) GO:0005829 (24.4%) "GO:0004354 (25.6%) GO:0000166 (24.4%)" glutamate biosynthetic process (25.6%) cytosol (24.4%) "glutamate dehydrogenase (NADP+) activity (25.6%) nucleotide binding (24.4%)" "IPR006095 (12.5%) IPR006096 (12.5%) IPR006097 (12.5%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.5%)" IGVMFGNPETTTGGNALK root "3.6.1.15 (33.3%) 3.6.3.8 (33.3%) 4.2.1.2 (33.3%)" "nucleoside-triphosphate phosphatase (33.3%) Transferred entry: 7.2.2.10 (33.3%) fumarate hydratase (33.3%)" "GO:0006310 (13.3%) GO:0006281 (13.3%) GO:0009432 (12.3%)" "GO:0005829 (13.3%) GO:0005737 (0%) GO:0005739 (0%)" "GO:0003697 (13.3%) GO:0005524 (13.3%) GO:0140664 (13.2%)" "DNA recombination (13.3%) DNA repair (13.3%) SOS response (12.3%)" "cytosol (13.3%) cytoplasm (0%) mitochondrion (0%)" "single-stranded DNA binding (13.3%) ATP binding (13.3%) ATP-dependent DNA damage sensor activity (13.2%)" "IPR013765 (12.2%) IPR049428 (12.2%) IPR020587 (12.2%)" "DNA recombination and repair protein RecA (12.2%) RecA-like, N-terminal (12.2%) DNA recombination and repair protein RecA, monomer-monomer interface (12.2%)" TEVEVNLPEQTITNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.33 (100%) 3-isopropylmalate dehydratase (100%) GO:0009098 (33.3%) GO:0009316 (33.3%) GO:0003861 (33.3%) L-leucine biosynthetic process (33.3%) 3-isopropylmalate dehydratase complex (33.3%) 3-isopropylmalate dehydratase activity (33.3%) "IPR000573 (20%) IPR004431 (20%) IPR015928 (20%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (20%) 3-isopropylmalate dehydratase, small subunit (20%) Aconitase/3-isopropylmalate dehydratase, swivel (20%)" MQGSVTEFLKPR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.7%) GO:0006352 (0%) GO:0006879 (0%)" "GO:0000428 (16.8%) GO:0005737 (16.5%) GO:0000345 (0%)" "GO:0003899 (16.7%) GO:0046983 (16.7%) GO:0003677 (16.3%)" "DNA-templated transcription (16.7%) DNA-templated transcription initiation (0%) intracellular iron ion homeostasis (0%)" "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.5%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%) DNA binding (16.3%)" "IPR036603 (16.9%) IPR011263 (16.8%) IPR036643 (16.7%)" "RNA polymerase, RBP11-like subunit (16.9%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) DNA-directed RNA polymerase, insert domain superfamily (16.7%)" DSAKDAVIPGLQKDYEEDFKTALLR root GO:0008652 (16.7%) "GO:0005737 (16.7%) GO:0005829 (16.7%)" "GO:0004674 (16.7%) GO:0008899 (16.7%) GO:0016491 (16.7%)" amino acid biosynthetic process (16.7%) "cytoplasm (16.7%) cytosol (16.7%)" "protein serine/threonine kinase activity (16.7%) homoserine O-succinyltransferase activity (16.7%) oxidoreductase activity (16.7%)" "IPR009383 (48.7%) IPR038134 (48.4%) IPR001853 (0.3%)" "Protein of unknown function DUF1040 (48.7%) YihD-like superfamily (48.4%) DSBA-like thioredoxin domain (0.3%)" AYSIDLKDYVEFGLNEEDAPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" EFNKEVANVNDAENKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" ILEPIYDVEVFVPSDKMGDVMGDLQGRR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (25%) "GO:0003746 (25.4%) GO:0005525 (25%) GO:0003924 (24.6%)" ribosome disassembly (25%) "translation elongation factor activity (25.4%) GTP binding (25%) GTPase activity (24.6%)" "IPR000640 (7.6%) IPR005517 (7.6%) IPR009000 (7.6%)" "Elongation factor EFG, domain V-like (7.6%) Translation elongation factor EFG/EF2, domain IV (7.6%) Translation protein, beta-barrel domain superfamily (7.6%)" TQCMSYIAQTGGQIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.3.1.2 (76.9%) 6.3.1.- (23.1%)" "glutamine synthetase (76.9%) Acid--ammonia (or amine) ligases (amide synthases) (23.1%)" "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" LDTVAYGLFQQFQQK Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus "IPR010368 (50%) IPR023378 (50%)" "Control of competence regulator ComK, YlbF/YmcA (50%) YheA/YmcA-like domain superfamily (50%)" LVIQQLEEQEKALTNLFTGILTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR032265 (100%) Protein of unknown function DUF4831 (100%) MAQIKEVDGVNKADDALNHILETYGHLIAEER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0008199 (43.3%) GO:0016722 (43.3%) GO:0003677 (13.3%)" "ferric iron binding (43.3%) oxidoreductase activity, acting on metal ions (43.3%) DNA binding (13.3%)" "IPR002177 (20%) IPR008331 (20%) IPR009078 (20%)" "DNA-binding protein Dps (20%) Ferritin/DPS domain (20%) Ferritin-like superfamily (20%)" DYVSVSEFEGKPILKIEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (19.7%) "GO:0046872 (20.3%) GO:0051539 (20.3%) GO:0004333 (19.7%)" tricarboxylic acid cycle (19.7%) "metal ion binding (20.3%) 4 iron, 4 sulfur cluster binding (20.3%) fumarate hydratase activity (19.7%)" "IPR004646 (17.1%) IPR051208 (17.1%) IPR004647 (16.5%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (17.1%) Class-I Fumarase/Tartrate Dehydratase (17.1%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.5%)" YNIDTIYNLAALLSAVAEAKPQLAWK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.103 (50%) 4.2.1.47 (50%)" "L-threonine 3-dehydrogenase (50%) GDP-mannose 4,6-dehydratase (50%)" GO:0006567 (49.1%) "GO:0008743 (49.1%) GO:0016829 (1.9%)" L-threonine catabolic process (49.1%) "L-threonine 3-dehydrogenase activity (49.1%) lyase activity (1.9%)" "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" SDKLLTLGIKPNRPETGYGYIQIAEQEGDNFYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.13 (100%) mannose-1-phosphate guanylyltransferase (100%) GO:0009298 (30.6%) "GO:0004475 (30.6%) GO:0005525 (30.6%) GO:0008928 (4.1%)" GDP-mannose biosynthetic process (30.6%) "mannose-1-phosphate guanylyltransferase (GTP) activity (30.6%) GTP binding (30.6%) mannose-1-phosphate guanylyltransferase (GDP) activity (4.1%)" "IPR005835 (25%) IPR029044 (25%) IPR049577 (25%)" "Nucleotidyl transferase domain (25%) Nucleotide-diphospho-sugar transferases (25%) GDP-mannose pyrophosphorylase, N-terminal domain (25%)" MLAHCEAVTPIRR root "1.3.1.9 (99.8%) 1.3.1.10 (0.2%)" "enoyl-[acyl-carrier-protein] reductase (NADH) (99.8%) enoyl-[acyl-carrier-protein] reductase (NADPH, Si-specific) (0.2%)" "GO:0006633 (34.4%) GO:0009102 (29.6%) GO:0030497 (0.2%)" "GO:0005829 (0%) GO:0005886 (0%) GO:0016020 (0%)" "GO:0004318 (34.6%) GO:0016491 (0.3%) GO:0042802 (0.2%)" "fatty acid biosynthetic process (34.4%) biotin biosynthetic process (29.6%) fatty acid elongation (0.2%)" "cytosol (0%) plasma membrane (0%) membrane (0%)" "enoyl-[acyl-carrier-protein] reductase (NADH) activity (34.6%) oxidoreductase activity (0.3%) identical protein binding (0.2%)" "IPR002347 (33.2%) IPR014358 (33.2%) IPR036291 (33.2%)" "Short-chain dehydrogenase/reductase SDR (33.2%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.2%) NAD(P)-binding domain superfamily (33.2%)" HTVAGILIESIKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005829 (33.3%) "GO:0003677 (33.3%) GO:0003700 (33.3%)" cytosol (33.3%) "DNA binding (33.3%) DNA-binding transcription factor activity (33.3%)" "IPR000847 (20%) IPR005119 (20%) IPR036388 (20%)" "LysR, HTH, N-terminal domain (20%) LysR, substrate-binding (20%) Winged helix-like DNA-binding domain superfamily (20%)" AAEGNNFGTVLIPEGLIEFVPAMK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" VEAEHENRYR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0005506 (50%) GO:0016491 (28.6%) GO:0016692 (14.3%)" "iron ion binding (50%) oxidoreductase activity (28.6%) NADH peroxidase activity (14.3%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" IADKNHIEMLDCYTGFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (24.1%) GO:0006166 (24.1%)" "GO:0000287 (24.1%) GO:0008973 (24.1%) GO:0004614 (3.8%)" "carbohydrate metabolic process (24.1%) purine ribonucleoside salvage (24.1%)" "magnesium ion binding (24.1%) phosphopentomutase activity (24.1%) phosphoglucomutase activity (3.8%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" TATFMPKPMFGDNGSGMHCHMSLSK root 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (14.4%) GO:0019740 (14.4%) GO:0009314 (0%)" "GO:0005737 (14.4%) GO:0016020 (14.3%) GO:0005829 (0%)" "GO:0004356 (14.4%) GO:0005524 (14%) GO:0046872 (13.8%)" "glutamine biosynthetic process (14.4%) nitrogen utilization (14.4%) response to radiation (0%)" "cytoplasm (14.4%) membrane (14.3%) cytosol (0%)" "glutamine synthetase activity (14.4%) ATP binding (14%) metal ion binding (13.8%)" "IPR008146 (12.8%) IPR014746 (12.8%) IPR027303 (12.8%)" "Glutamine synthetase, catalytic domain (12.8%) Glutamine synthetase/guanido kinase, catalytic domain (12.8%) Glutamine synthetase, glycine-rich site (12.8%)" SYYPEGSDYLAEYIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.3.1.1 (95%) 1.3.98.1 (5%)" "dihydrouracil dehydrogenase (NAD(+)) (95%) dihydroorotate oxidase (fumarate) (5%)" "GO:0006210 (13.5%) GO:0006212 (13.5%) GO:0044205 (12%)" GO:0005737 (14.3%) "GO:0002058 (13.5%) GO:0004152 (13.5%) GO:0050661 (13.5%)" "thymine catabolic process (13.5%) uracil catabolic process (13.5%) 'de novo' UMP biosynthetic process (12%)" cytoplasm (14.3%) "uracil binding (13.5%) dihydroorotate dehydrogenase activity (13.5%) NADP binding (13.5%)" "IPR005720 (32.8%) IPR012135 (32.8%) IPR013785 (32.8%)" "Dihydroorotate dehydrogenase, catalytic (32.8%) Dihydroorotate dehydrogenase, class 1/ 2 (32.8%) Aldolase-type TIM barrel (32.8%)" LNVFIQVSEENRPAALETAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.-.-.- (100%) Oxidoreductases (100%) "GO:0003824 (50%) GO:0004497 (50%)" "catalytic activity (50%) monooxygenase activity (50%)" "IPR007138 (33.3%) IPR011008 (33.3%) IPR050744 (33.3%)" "Antibiotic biosynthesis monooxygenase domain (33.3%) Dimeric alpha-beta barrel (33.3%) AI-2 Signaling Cycle Isomerase LsrG (33.3%)" LVVDVTSLGLGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" SAIANWEQKNER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (24.9%) "GO:0022625 (24.8%) GO:0005840 (0.3%) GO:1990904 (0.2%)" "GO:0003735 (24.9%) GO:0019843 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.8%) ribosome (0.3%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (24.9%) rRNA binding (24.9%)" "IPR001063 (25.1%) IPR036394 (25%) IPR047867 (25%)" "Large ribosomal subunit protein uL22 (25.1%) Ribosomal protein uL22 superfamily (25%) Large ribosomal subunit protein uL22, bacteria/organella (25%)" LKELAESPEDANKAYNEFKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR007139 (100%) Protein of unknown function DUF349 (100%) LTIVGAAGMIGSNMAQTALMMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006108 (32.8%) GO:0006099 (1.5%)" GO:0005737 (1.5%) "GO:0016615 (29.9%) GO:0016616 (29.9%) GO:0030060 (4.5%)" "malate metabolic process (32.8%) tricarboxylic acid cycle (1.5%)" cytoplasm (1.5%) "malate dehydrogenase activity (29.9%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (29.9%) L-malate dehydrogenase (NAD+) activity (4.5%)" "IPR001236 (17.2%) IPR036291 (17.2%) IPR001557 (16.4%)" "Lactate/malate dehydrogenase, N-terminal (17.2%) NAD(P)-binding domain superfamily (17.2%) L-lactate/malate dehydrogenase (16.4%)" TSPFAFTGNRFEFR root "6.3.1.2 (98.1%) 5.4.4.3 (1.9%)" "glutamine synthetase (98.1%) 3-(hydroxyamino)phenol mutase (1.9%)" "GO:0006542 (48.9%) GO:0006979 (0.1%) GO:0006529 (0%)" "GO:0005737 (0.1%) GO:0005886 (0%) GO:0016020 (0%)" "GO:0004356 (49.9%) GO:0034022 (0.2%) GO:0004601 (0.1%)" "glutamine biosynthetic process (48.9%) response to oxidative stress (0.1%) obsolete asparagine biosynthetic process (0%)" "cytoplasm (0.1%) plasma membrane (0%) membrane (0%)" "glutamine synthetase activity (49.9%) 3-(hydroxyamino)phenol mutase activity (0.2%) peroxidase activity (0.1%)" "IPR008146 (14.4%) IPR052725 (14.3%) IPR014746 (14.3%)" "Glutamine synthetase, catalytic domain (14.4%) Glutamine Synthetase Type-3 (14.3%) Glutamine synthetase/guanido kinase, catalytic domain (14.3%)" EVSSNIIDQCVAQGVPFAR Pseudomonadati Bacteria Pseudomonadati 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (15.8%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (15.8%)" "IPR003953 (14.4%) IPR011280 (14.4%) IPR027477 (14.4%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.4%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.4%) Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily (14.4%)" MLQEAVDSLFDNSR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) "GO:0000428 (16.9%) GO:0031981 (0.1%)" "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (15.5%)" DNA-templated transcription (16.9%) "DNA-directed RNA polymerase complex (16.9%) nuclear lumen (0.1%)" "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (15.5%)" "IPR007080 (9%) IPR045867 (9%) IPR006592 (9%)" "RNA polymerase Rpb1, domain 1 (9%) DNA-directed RNA polymerase, subunit beta-prime (9%) RNA polymerase, N-terminal (9%)" IGVITSGGDAPGMNAAIR root "2.7.1.11 (99.7%) 1.17.7.4 (0.3%) 2.7.1.- (0%)" "6-phosphofructokinase (99.7%) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (0.3%) Phosphotransferases with an alcohol group as acceptor (0%)" "GO:0006002 (8.8%) GO:0030388 (8.8%) GO:0061621 (8.8%)" "GO:0005945 (8.8%) GO:0005737 (0%) GO:0005829 (0%)" "GO:0003872 (8.8%) GO:0046872 (8.8%) GO:0005524 (8.8%)" "fructose 6-phosphate metabolic process (8.8%) fructose 1,6-bisphosphate metabolic process (8.8%) canonical glycolysis (8.8%)" "6-phosphofructokinase complex (8.8%) cytoplasm (0%) cytosol (0%)" "6-phosphofructokinase activity (8.8%) metal ion binding (8.8%) ATP binding (8.8%)" "IPR000023 (17.1%) IPR035966 (17.1%) IPR022953 (17%)" "Phosphofructokinase domain (17.1%) Phosphofructokinase superfamily (17.1%) ATP-dependent 6-phosphofructokinase (17%)" MDNTEIPKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50.4%) GO:0046872 (49.6%)" "alkaline phosphatase activity (50.4%) metal ion binding (49.6%)" "IPR001952 (33.3%) IPR017850 (33.3%) IPR018299 (33.3%)" "Alkaline phosphatase (33.3%) Alkaline-phosphatase-like, core domain superfamily (33.3%) Alkaline phosphatase, active site (33.3%)" LSTADDKVTAPVNIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae ARQQFDKPSVINR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001911 (50%) IPR038380 (50%)" "Small ribosomal subunit protein bS21 (50%) Small ribosomal subunit protein bS21 superfamily (50%)" YTSSVVIDESVIQGIKDAASFAPLHNPAHLIGIEEALK Pseudomonadati Bacteria Pseudomonadati 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.6%) GO:0006085 (15.9%) GO:0019413 (0.2%)" "GO:0005829 (16.6%) GO:0016020 (0.2%)" "GO:0008776 (16.6%) GO:0005524 (16.4%) GO:0000287 (15.9%)" "acetate metabolic process (16.6%) acetyl-CoA biosynthetic process (15.9%) acetate biosynthetic process (0.2%)" "cytosol (16.6%) membrane (0.2%)" "acetate kinase activity (16.6%) ATP binding (16.4%) magnesium ion binding (15.9%)" "IPR000890 (25.4%) IPR043129 (25.4%) IPR023865 (24.9%)" "Aliphatic acid kinase, short-chain (25.4%) ATPase, nucleotide binding domain (25.4%) Aliphatic acid kinase, short-chain, conserved site (24.9%)" TYTHPVDGTTLDMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" TTDVTGTIELPEGVEMVMPGDNIK root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0.1%) GO:0046677 (0%)" "GO:0005829 (19.4%) GO:0032045 (8.5%) GO:0005886 (0.9%)" "GO:0003746 (19.7%) GO:0005525 (19.5%) GO:0003924 (11.1%)" "translational elongation (0.1%) response to antibiotic (0%)" "cytosol (19.4%) guanyl-nucleotide exchange factor complex (8.5%) plasma membrane (0.9%)" "translation elongation factor activity (19.7%) GTP binding (19.5%) GTPase activity (11.1%)" "IPR004160 (12%) IPR050055 (12%) IPR009001 (12%)" "Translation elongation factor EFTu/EF1A, C-terminal (12%) Elongation factor Tu GTPase (12%) Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (12%)" VAEFFGKEPR root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0006260 (0.1%) GO:0042026 (0.1%) GO:0051085 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0005524 (28.8%) GO:0140662 (28.8%) GO:0051082 (24.1%)" "DNA replication (0.1%) protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytosol (0.1%) cytoplasm (0%) plasma membrane (0%)" "ATP binding (28.8%) ATP-dependent protein folding chaperone (28.8%) unfolded protein binding (24.1%)" "IPR013126 (17.4%) IPR043129 (17.4%) IPR018181 (17.3%)" "Heat shock protein 70 family (17.4%) ATPase, nucleotide binding domain (17.4%) Heat shock protein 70, conserved site (17.3%)" AIAPNLPLVEVGIRPGEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "4.2.1.115 (63.6%) 4.2.1.- (36.4%)" "UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (63.6%) Hydro-lyases (36.4%)" GO:0016829 (100%) lyase activity (100%) "IPR003869 (25.4%) IPR036291 (25.4%) IPR051203 (25.4%)" "Polysaccharide biosynthesis protein, CapD-like domain (25.4%) NAD(P)-binding domain superfamily (25.4%) Polysaccharide Synthase-Related Protein (25.4%)" SITQGLGAGNRPER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0000917 (14.3%) GO:0043093 (14%) GO:0051258 (14%)" "GO:0005737 (14.3%) GO:0032153 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%)" "division septum assembly (14.3%) FtsZ-dependent cytokinesis (14%) protein polymerization (14%)" "cytoplasm (14.3%) cell division site (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%)" "IPR000158 (11.2%) IPR003008 (11.2%) IPR008280 (11.2%)" "Cell division protein FtsZ (11.2%) Tubulin/FtsZ, GTPase domain (11.2%) Tubulin/FtsZ, C-terminal (11.2%)" KYGQTGEATWLTAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (62.1%) "GO:0016853 (34.5%) GO:0003755 (3.4%)" plasma membrane (62.1%) "isomerase activity (34.5%) peptidyl-prolyl cis-trans isomerase activity (3.4%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" VIFEAIHEESVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.4.99.5 (100%) chorismate mutase (100%) GO:0046417 (47.2%) "GO:0004106 (47.2%) GO:0003849 (5.6%)" chorismate metabolic process (47.2%) "chorismate mutase activity (47.2%) 3-deoxy-7-phosphoheptulonate synthase activity (5.6%)" "IPR002701 (16.7%) IPR006218 (16.7%) IPR013785 (16.7%)" "Chorismate mutase II, prokaryotic-type (16.7%) DAHP synthetase I/KDSA (16.7%) Aldolase-type TIM barrel (16.7%)" EFAAMPALYIADGHHR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR008323 (100%) Uncharacterised conserved protein UCP033563 (100%) NIVDYANVLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (14%) GO:0006526 (14%) GO:0006541 (14%)" GO:0005737 (14%) "GO:0004088 (14%) GO:0005524 (14%) GO:0046872 (14%)" "pyrimidine nucleotide biosynthetic process (14%) L-arginine biosynthetic process (14%) glutamine metabolic process (14%)" cytoplasm (14%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14%) ATP binding (14%) metal ion binding (14%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" VGLINSGGESHGASDLKDAVVTAVVNKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (48.9%) "GO:0004332 (48.9%) GO:0016829 (2.2%)" glycolytic process (48.9%) "fructose-bisphosphate aldolase activity (48.9%) lyase activity (2.2%)" "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" QSVVDKIQALVDAGEYPAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.13 (100%) glutamate synthase (NADPH) (100%) "GO:0016740 (97.9%) GO:0004355 (2.1%)" "transferase activity (97.9%) glutamate synthase (NADPH) activity (2.1%)" IPR029044 (100%) Nucleotide-diphospho-sugar transferases (100%) LMADITDVDGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.4.13.- (75%) 3.5.1.- (25%)" "Dipeptidases (75%) In linear amides (25%)" "GO:0046872 (50%) GO:0016787 (37.5%) GO:0016805 (12.5%)" "metal ion binding (50%) hydrolase activity (37.5%) dipeptidase activity (12.5%)" "IPR002933 (33.3%) IPR011650 (33.3%) IPR051458 (33.3%)" "Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%) Cytosolic and Metallo Dipeptidase (33.3%)" NIGFDDSFIYDELSLKPSAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.4.3 (100%) guanine deaminase (100%) GO:0006152 (32.8%) "GO:0047974 (32.8%) GO:0008270 (31%) GO:0008892 (3.4%)" purine nucleoside catabolic process (32.8%) "guanosine deaminase activity (32.8%) zinc ion binding (31%) guanine deaminase activity (3.4%)" "IPR002125 (33.9%) IPR016193 (33.9%) IPR016192 (32.1%)" "Cytidine and deoxycytidylate deaminase domain (33.9%) Cytidine deaminase-like (33.9%) APOBEC/CMP deaminase, zinc-binding (32.1%)" DYKSDQYVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.3 (72%) 1.2.-.- (16%) 1.2.7.11 (12%)" "2-oxoglutarate synthase (72%) Acting on the aldehyde or oxo group of donors (16%) 2-oxoacid oxidoreductase (ferredoxin) (12%)" GO:0044281 (28.2%) "GO:0030976 (35.9%) GO:0016625 (28.2%) GO:0047553 (7.7%)" small molecule metabolic process (28.2%) "thiamine pyrophosphate binding (35.9%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (28.2%) 2-oxoglutarate synthase activity (7.7%)" "IPR011766 (33.2%) IPR029061 (33.2%) IPR051457 (33.2%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.2%) Thiamin diphosphate-binding fold (33.2%) 2-oxoacid:ferredoxin oxidoreductase (33.2%)" AYWDDGAQMIAPHDKNTIAEVNK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (23.9%) GO:0006166 (23.9%)" "GO:0000287 (23.9%) GO:0008973 (23.9%) GO:0004614 (4.3%)" "carbohydrate metabolic process (23.9%) purine ribonucleoside salvage (23.9%)" "magnesium ion binding (23.9%) phosphopentomutase activity (23.9%) phosphoglucomutase activity (4.3%)" "IPR005841 (12.7%) IPR005844 (12.7%) IPR005845 (12.7%)" "Alpha-D-phosphohexomutase superfamily (12.7%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.7%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.7%)" TEQIPSDFYR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0006353 (19.5%) GO:0031564 (19.5%)" GO:0005829 (19.5%) "GO:0003723 (19.5%) GO:0003700 (19.2%) GO:0003746 (2.1%)" "DNA-templated transcription termination (19.5%) transcription antitermination (19.5%)" cytosol (19.5%) "RNA binding (19.5%) DNA-binding transcription factor activity (19.2%) translation elongation factor activity (2.1%)" "IPR012340 (12.3%) IPR030842 (12.3%) IPR009019 (12.1%)" "Nucleic acid-binding, OB-fold (12.3%) Transcription factor NusA, prokaryotes (12.3%) K homology domain superfamily, prokaryotic type (12.1%)" VSPDANKLEIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (19.8%) GO:0032543 (0.8%)" "GO:0005840 (19.8%) GO:1990904 (19.8%) GO:0005762 (0.8%)" "GO:0003735 (20.7%) GO:0019843 (18.2%)" "translation (19.8%) mitochondrial translation (0.8%)" "ribosome (19.8%) ribonucleoprotein complex (19.8%) mitochondrial large ribosomal subunit (0.8%)" "structural constituent of ribosome (20.7%) rRNA binding (18.2%)" "IPR012677 (26%) IPR012678 (26%) IPR013025 (26%)" "Nucleotide-binding alpha-beta plait domain superfamily (26%) Ribosomal protein uL23/eL15/eS24 core domain superfamily (26%) Large ribosomal subunit protein uL23-like (26%)" YITGECPHCHAEGAYGDQCEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (17%) GO:0005829 (17%) "GO:0004825 (17%) GO:0005524 (17%) GO:0000049 (16%)" methionyl-tRNA aminoacylation (17%) cytosol (17%) "methionine-tRNA ligase activity (17%) ATP binding (17%) tRNA binding (16%)" "IPR001412 (8.6%) IPR015413 (8.6%) IPR023458 (8.6%)" "Aminoacyl-tRNA synthetase, class I, conserved site (8.6%) Methionyl/Leucyl tRNA synthetase (8.6%) Methionine-tRNA ligase, type 1 (8.6%)" GILTSNGAEIINEENWGLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" QLTPHPWDALDTNLKVGDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" MDPYVDLFQSHGGSMIMLAK Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) "GO:0006099 (18.7%) GO:0006091 (2%)" "GO:0004333 (20.7%) GO:0046872 (20.7%) GO:0051539 (20.7%)" "tricarboxylic acid cycle (18.7%) generation of precursor metabolites and energy (2%)" "fumarate hydratase activity (20.7%) metal ion binding (20.7%) 4 iron, 4 sulfur cluster binding (20.7%)" "IPR004647 (16.7%) IPR020557 (16.7%) IPR036660 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Fumarate lyase, conserved site (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (16.7%)" AVIGIENNKPDAIAHLQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.-.-.- (100%) Translocases (100%) GO:0022900 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0046872 (20%) GO:0051539 (20%)" electron transport chain (20%) plasma membrane (20%) "electron transfer activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR010208 (14.3%) IPR011538 (14.3%) IPR017896 (14.3%)" "Ion-translocating oxidoreductase complex, subunit RnfC/RsxC (14.3%) NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain (14.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14.3%)" MEKDAADNEAKGKEYR root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (33.7%) GO:0042026 (0.3%)" "GO:0042597 (22.4%) GO:0030313 (8%) GO:0030288 (0.3%)" "GO:0003755 (34%) GO:0016853 (0.9%) GO:0044183 (0.3%)" "protein folding (33.7%) protein refolding (0.3%)" "periplasmic space (22.4%) cell envelope (8%) outer membrane-bounded periplasmic space (0.3%)" "peptidyl-prolyl cis-trans isomerase activity (34%) isomerase activity (0.9%) protein folding chaperone (0.3%)" "IPR000774 (25.2%) IPR046357 (25.2%) IPR001179 (24.8%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25.2%) Peptidyl-prolyl cis-trans isomerase domain superfamily (25.2%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (24.8%)" LYAVSVADVVCLHCPNQPGALAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR045739 (34%) IPR045865 (34%) IPR002912 (31.9%)" "ACT domain pair (34%) ACT-like domain (34%) ACT domain (31.9%)" LKPYNQEVEEQDPVRLVWESEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR032573 (100%) Protein of unknown function DUF4925 (100%) LSMNNVLGMIPGKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.-.- (50%) 3.4.11.24 (50%)" "Acting on peptide bonds (peptidases) (50%) aminopeptidase S (50%)" GO:0006508 (43.2%) "GO:0008235 (43.2%) GO:0004177 (13.6%)" proteolysis (43.2%) "metalloexopeptidase activity (43.2%) aminopeptidase activity (13.6%)" "IPR007484 (50%) IPR045175 (50%)" "Peptidase M28 (50%) Peptidase M28 family (50%)" AVAAVNGPIAQALIGKDAKDQAGIDK root "4.2.1.11 (99.4%) 6.3.4.2 (0.6%)" "phosphopyruvate hydratase (99.4%) CTP synthase (glutamine hydrolyzing) (0.6%)" "GO:0006096 (16.9%) GO:0006396 (0.1%) GO:0006401 (0.1%)" "GO:0000015 (16.9%) GO:0005576 (16.4%) GO:0009986 (14.3%)" "GO:0000287 (16.9%) GO:0004634 (16.9%) GO:0016829 (0.3%)" "glycolytic process (16.9%) RNA processing (0.1%) RNA catabolic process (0.1%)" "phosphopyruvate hydratase complex (16.9%) extracellular region (16.4%) cell surface (14.3%)" "magnesium ion binding (16.9%) phosphopyruvate hydratase activity (16.9%) lyase activity (0.3%)" "IPR000941 (17.2%) IPR020811 (17.2%) IPR029017 (17.2%)" "Enolase (17.2%) Enolase, N-terminal (17.2%) Enolase-like, N-terminal (17.2%)" LAIDEQMMNEIEAIKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) GO:0048500 (20%) "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (20%)" SRP-dependent cotranslational protein targeting to membrane (20%) signal recognition particle (20%) "GTPase activity (20%) GTP binding (20%) 7S RNA binding (20%)" "IPR000897 (11.1%) IPR003593 (11.1%) IPR004125 (11.1%)" "Signal recognition particle, SRP54 subunit, GTPase domain (11.1%) AAA+ ATPase domain (11.1%) Signal recognition particle, SRP54 subunit, M-domain (11.1%)" VNTISQSPTFTTAGSGVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) "GO:0006633 (49%) GO:0032259 (1%)" "GO:0004318 (49%) GO:0008168 (1%)" "fatty acid biosynthetic process (49%) methylation (1%)" "enoyl-[acyl-carrier-protein] reductase (NADH) activity (49%) methyltransferase activity (1%)" "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" VIGQDEAIAAVSDAVRR Pseudomonadati Bacteria Pseudomonadati "GO:0034605 (19.6%) GO:0042026 (19.6%) GO:0006508 (0.9%)" GO:0005737 (19.6%) "GO:0005524 (19.6%) GO:0016887 (19.6%) GO:0008233 (0.9%)" "cellular response to heat (19.6%) protein refolding (19.6%) proteolysis (0.9%)" cytoplasm (19.6%) "ATP binding (19.6%) ATP hydrolysis activity (19.6%) peptidase activity (0.9%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" EVDGVNKADDALNHILETYGHLIAEER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0008199 (43.3%) GO:0016722 (43.3%) GO:0003677 (13.3%)" "ferric iron binding (43.3%) oxidoreductase activity, acting on metal ions (43.3%) DNA binding (13.3%)" "IPR002177 (20%) IPR008331 (20%) IPR009078 (20%)" "DNA-binding protein Dps (20%) Ferritin/DPS domain (20%) Ferritin-like superfamily (20%)" AEENYKHATDVTSKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" MKRDDLIFDIIEKEHQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (14.8%) GO:0035999 (14.6%) GO:0032259 (12.9%)" "GO:0005829 (14.8%) GO:0005737 (0.1%)" "GO:0004372 (14.8%) GO:0030170 (14.8%) GO:0008168 (12.9%)" "glycine biosynthetic process from serine (14.8%) tetrahydrofolate interconversion (14.6%) methylation (12.9%)" "cytosol (14.8%) cytoplasm (0.1%)" "glycine hydroxymethyltransferase activity (14.8%) pyridoxal phosphate binding (14.8%) methyltransferase activity (12.9%)" "IPR015422 (14.5%) IPR015424 (14.5%) IPR039429 (14.4%)" "Pyridoxal phosphate-dependent transferase, small domain (14.5%) Pyridoxal phosphate-dependent transferase (14.5%) Serine hydroxymethyltransferase-like domain (14.4%)" DFPTGGYIYGISGVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.6.2.2 (98.8%) 5.99.1.3 (1.2%)" "DNA topoisomerase (ATP-hydrolyzing) (98.8%) Transferred entry: 5.6.2.2 (1.2%)" "GO:0006265 (12.7%) GO:0006261 (11.7%)" "GO:0005737 (12.7%) GO:0009330 (12.7%) GO:0005694 (12.1%)" "GO:0003677 (12.7%) GO:0005524 (12.7%) GO:0034335 (11.9%)" "DNA topological change (12.7%) DNA-templated DNA replication (11.7%)" "cytoplasm (12.7%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.7%) chromosome (12.1%)" "DNA binding (12.7%) ATP binding (12.7%) DNA negative supercoiling activity (11.9%)" "IPR002205 (12.7%) IPR006691 (12.7%) IPR050220 (12.7%)" "DNA topoisomerase, type IIA, domain A (12.7%) DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.7%) Type II DNA Topoisomerases (12.7%)" NFNVADVTTTTDGNK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.2%) IPR006101 (7.2%) IPR006103 (7.2%)" "Beta galactosidase small chain/ domain 5 (7.2%) Glycoside hydrolase, family 2 (7.2%) Glycoside hydrolase family 2, catalytic domain (7.2%)" SYNIHELDAASNNSVDDIR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.7 (100%) DNA-directed DNA polymerase (100%) GO:0006261 (16.6%) GO:0009360 (16.6%) "GO:0003677 (16.6%) GO:0003887 (16.6%) GO:0005524 (16.6%)" DNA-templated DNA replication (16.6%) DNA polymerase III complex (16.6%) "DNA binding (16.6%) DNA-directed DNA polymerase activity (16.6%) ATP binding (16.6%)" "IPR008921 (11.6%) IPR012763 (11.6%) IPR027417 (11.6%)" "DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (11.6%) DNA polymerase III, subunit gamma/ tau, N-terminal (11.6%) P-loop containing nucleoside triphosphate hydrolase (11.6%)" NTPSQEQMPDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "1.1.1.18 (66.7%) 1.1.1.292 (33.3%)" "inositol 2-dehydrogenase (66.7%) 1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming) (33.3%)" "GO:0000166 (71.4%) GO:0050112 (14.3%) GO:0016491 (7.1%)" "nucleotide binding (71.4%) inositol 2-dehydrogenase (NAD+) activity (14.3%) oxidoreductase activity (7.1%)" "IPR000683 (25%) IPR004104 (25%) IPR036291 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Gfo/Idh/MocA-like oxidoreductase, C-terminal (25%) NAD(P)-binding domain superfamily (25%)" ATAAVTEAPAAEAASEEKAAE Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.3%) IPR036373 (33.3%) IPR047859 (33.3%)" "Large ribosomal subunit protein bL17 (33.3%) Large ribosomal subunit protein bL17 superfamily (33.3%) Large ribosomal subunit protein bL17, conserved site (33.3%)" YQFKDPYTGEEEEILIENTETRDQPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (49.2%) "GO:0016149 (49.2%) GO:0003747 (0.8%) GO:0016787 (0.8%)" cytoplasm (49.2%) "translation release factor activity, codon specific (49.2%) translation release factor activity (0.8%) hydrolase activity (0.8%)" "IPR000352 (25.2%) IPR045853 (25.2%) IPR004374 (24.8%)" "Peptide chain release factor class I (25.2%) Peptide chain release factor class I superfamily (25.2%) Peptide chain release factor 2 (24.8%)" CAGYNNVDLK root "1.1.1.28 (70.7%) 2.7.4.24 (19.5%) 1.1.1.290 (9.8%)" "D-lactate dehydrogenase (70.7%) diphosphoinositol-pentakisphosphate 1-kinase (19.5%) 4-phosphoerythronate dehydrogenase (9.8%)" "GO:0006020 (2.2%) GO:0032958 (2.2%) GO:0007154 (0.3%)" "GO:0005829 (2.2%) GO:0005856 (2.2%) GO:0070822 (0.5%)" "GO:0051287 (40.8%) GO:0008720 (34.5%) GO:0016616 (6.3%)" "inositol metabolic process (2.2%) inositol phosphate biosynthetic process (2.2%) cell communication (0.3%)" "cytosol (2.2%) cytoskeleton (2.2%) Sin3-type complex (0.5%)" "NAD binding (40.8%) D-lactate dehydrogenase (NAD+) activity (34.5%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (6.3%)" "IPR006139 (21.3%) IPR006140 (21.1%) IPR036291 (21.1%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (21.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (21.1%) NAD(P)-binding domain superfamily (21.1%)" RLEMWVDMLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033103 (50%) GO:0033104 (50%) protein secretion by the type VI secretion system (50%) type VI protein secretion system complex (50%) IPR035576 (100%) Type VI secretion system TssC (100%) MELSVFNIKGEDTGRK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" TTLTAAITTVLAKK root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0.1%) GO:0070125 (0.1%)" "GO:0005829 (17.6%) GO:0032045 (6.1%) GO:0005737 (0.2%)" "GO:0003746 (18.1%) GO:0003924 (17.9%) GO:0005525 (17.9%)" "translational elongation (0.1%) mitochondrial translational elongation (0.1%)" "cytosol (17.6%) guanyl-nucleotide exchange factor complex (6.1%) cytoplasm (0.2%)" "translation elongation factor activity (18.1%) GTPase activity (17.9%) GTP binding (17.9%)" "IPR000795 (8.5%) IPR050055 (8.5%) IPR031157 (8.5%)" "Translational (tr)-type GTP-binding domain (8.5%) Elongation factor Tu GTPase (8.5%) Tr-type G domain, conserved site (8.5%)" VSKEYPVVVSEFMQGTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (14%) GO:0006526 (14%) GO:0006541 (14%)" GO:0005737 (14%) "GO:0004088 (14%) GO:0005524 (14%) GO:0046872 (14%)" "pyrimidine nucleotide biosynthetic process (14%) L-arginine biosynthetic process (14%) glutamine metabolic process (14%)" cytoplasm (14%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14%) ATP binding (14%) metal ion binding (14%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" TFLDQTGGLWASGALYGK root 1.6.5.2 (100%) NAD(P)H dehydrogenase (quinone) (100%) GO:0006979 (0%) "GO:0016020 (16.3%) GO:0005829 (0%) GO:0032991 (0%)" "GO:0010181 (16.4%) GO:0050660 (15.5%) GO:0050661 (15.5%)" response to oxidative stress (0%) "membrane (16.3%) cytosol (0%) protein-containing complex (0%)" "FMN binding (16.4%) flavin adenine dinucleotide binding (15.5%) NADP binding (15.5%)" "IPR010089 (20.3%) IPR029039 (20.2%) IPR008254 (20.1%)" "Flavoprotein WrbA-like (20.3%) Flavoprotein-like superfamily (20.2%) Flavodoxin/nitric oxide synthase (20.1%)" MFDNLSERLER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20.3%) "GO:0048500 (18.6%) GO:0005786 (1.4%)" "GO:0005525 (20.3%) GO:0003924 (20%) GO:0008312 (19.2%)" SRP-dependent cotranslational protein targeting to membrane (20.3%) "signal recognition particle (18.6%) signal recognition particle, endoplasmic reticulum targeting (1.4%)" "GTP binding (20.3%) GTPase activity (20%) 7S RNA binding (19.2%)" "IPR013822 (11.4%) IPR042101 (11.4%) IPR022941 (11.2%)" "Signal recognition particle SRP54, helical bundle (11.4%) Signal recognition particle SRP54, N-terminal domain superfamily (11.4%) Signal recognition particle, SRP54 subunit (11.2%)" IKHPSEFTQIGAEIEVQVLEIDKENRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.1%) "GO:0022627 (22.6%) GO:0005737 (1.5%) GO:0005840 (1.5%)" "GO:0003729 (24.1%) GO:0003735 (24.1%) GO:0004654 (0.8%)" translation (24.1%) "cytosolic small ribosomal subunit (22.6%) cytoplasm (1.5%) ribosome (1.5%)" "mRNA binding (24.1%) structural constituent of ribosome (24.1%) polyribonucleotide nucleotidyltransferase activity (0.8%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" KGDTVEFPAALVVDGSK Bifidobacterium adolescentis Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium adolescentis GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR001787 (25%) IPR018258 (25%) IPR028909 (25%)" "Large ribosomal subunit protein bL21 (25%) Large ribosomal subunit protein bL21, conserved site (25%) Large ribosomal subunit protein bL21-like (25%)" EKEAEVMSWWDQAIDAHNELGVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016853 (100%) isomerase activity (100%) "IPR006311 (25%) IPR013022 (25%) IPR036237 (25%)" "Twin-arginine translocation pathway, signal sequence (25%) Xylose isomerase-like, TIM barrel domain (25%) Xylose isomerase-like superfamily (25%)" SNYEAGKPVYCIYVAIGQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0045259 (19.2%) GO:0005886 (18.3%)" "GO:0005524 (19.2%) GO:0043531 (19.2%) GO:0046933 (19.2%)" "proton-transporting ATP synthase complex (19.2%) plasma membrane (18.3%)" "ATP binding (19.2%) ADP binding (19.2%) proton-transporting ATP synthase activity, rotational mechanism (19.2%)" "IPR000194 (10.2%) IPR000793 (10.2%) IPR005294 (10.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.2%) ATP synthase, alpha subunit, C-terminal (10.2%) ATP synthase, F1 complex, alpha subunit (10.2%)" LIEQKDEEQKQIDENVSFIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis CDVDDNDELTGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.8.4.2 (100%) protein-disulfide reductase (glutathione) (100%) GO:0045454 (33.3%) GO:0005829 (33.3%) "GO:0015035 (31%) GO:0019153 (2.4%)" cell redox homeostasis (33.3%) cytosol (33.3%) "protein-disulfide reductase activity (31%) protein-disulfide reductase (glutathione) activity (2.4%)" "IPR013766 (25.9%) IPR036249 (25.9%) IPR005746 (24.1%)" "Thioredoxin domain (25.9%) Thioredoxin-like superfamily (25.9%) Thioredoxin (24.1%)" AGYTDLEIFGYREDTGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR013022 (33.3%) IPR036237 (33.3%) IPR050312 (33.3%)" "Xylose isomerase-like, TIM barrel domain (33.3%) Xylose isomerase-like superfamily (33.3%) IolE/XylA/MocC-like (33.3%)" SCAAAGTECLISGWGNTK Sus scrofa Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Laurasiatheria Artiodactyla Suina Suidae Sus Sus scrofa 3.4.21.4 (100%) trypsin (100%) "GO:0006508 (24.2%) GO:0007586 (24.2%)" "GO:0005576 (18.2%) GO:0005615 (6.1%)" "GO:0004252 (24.2%) GO:0046872 (3%)" "proteolysis (24.2%) digestion (24.2%)" "extracellular region (18.2%) extracellular space (6.1%)" "serine-type endopeptidase activity (24.2%) metal ion binding (3%)" "IPR001254 (14.3%) IPR001314 (14.3%) IPR009003 (14.3%)" "Serine proteases, trypsin domain (14.3%) Peptidase S1A, chymotrypsin family (14.3%) Peptidase S1, PA clan (14.3%)" SDAVEASWHFFDPILR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.49 (100%) glucose-6-phosphate dehydrogenase (NADP(+)) (100%) "GO:0006006 (20%) GO:0009051 (20%)" GO:0005829 (20%) "GO:0004345 (20%) GO:0050661 (20%)" "glucose metabolic process (20%) pentose-phosphate shunt, oxidative branch (20%)" cytosol (20%) "glucose-6-phosphate dehydrogenase activity (20%) NADP binding (20%)" "IPR001282 (20%) IPR019796 (20%) IPR022674 (20%)" "Glucose-6-phosphate dehydrogenase (20%) Glucose-6-phosphate dehydrogenase, active site (20%) Glucose-6-phosphate dehydrogenase, NAD-binding (20%)" IFTTGWQSDWQNTMEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR002931 (33.3%) IPR024618 (33.3%) IPR038765 (33.3%)" "Transglutaminase-like (33.3%) Domain of unknown function DUF3857 (33.3%) Papain-like cysteine peptidase superfamily (33.3%)" IVIFGAPGSGKGTQSER Bacteria Bacteria "2.7.4.3 (96.9%) 2.7.4.- (3.1%)" "adenylate kinase (96.9%) Phosphotransferases with a phosphate group as acceptor (3.1%)" "GO:0044209 (23.2%) GO:0006139 (0.6%) GO:0009123 (0.3%)" "GO:0005737 (23.8%) GO:0005829 (0.3%)" "GO:0005524 (25.5%) GO:0004017 (24.6%) GO:0019205 (0.8%)" "AMP salvage (23.2%) nucleobase-containing compound metabolic process (0.6%) nucleoside monophosphate metabolic process (0.3%)" "cytoplasm (23.8%) cytosol (0.3%)" "ATP binding (25.5%) AMP kinase activity (24.6%) nucleobase-containing compound kinase activity (0.8%)" "IPR000850 (31.4%) IPR027417 (31.4%) IPR033690 (31%)" "Adenylate kinase/UMP-CMP kinase (31.4%) P-loop containing nucleoside triphosphate hydrolase (31.4%) Adenylate kinase, conserved site (31%)" HQKPTAVNPQGGIINK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR003256 (14.3%) IPR005824 (14.3%) IPR005825 (14.3%)" "Large ribosomal subunit protein uL24 (14.3%) KOW (14.3%) Large ribosomal subunit protein uL24, conserved site (14.3%)" SMADHPIVFALANPTPEISYEDAMASRPDVLMSTGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (17.4%) "GO:0016746 (17.4%) GO:0046872 (17.4%) GO:0051287 (17.4%)" malate metabolic process (17.4%) "acyltransferase activity (17.4%) metal ion binding (17.4%) NAD binding (17.4%)" "IPR002505 (9.1%) IPR012188 (9.1%) IPR012301 (9.1%)" "Phosphate acetyl/butaryl transferase (9.1%) NAD(P)-dependent malic enzyme (9.1%) Malic enzyme, N-terminal domain (9.1%)" DIPEADRDYYLER Bacteria Bacteria "1.3.5.1 (97.4%) 1.3.5.4 (2.6%)" "succinate dehydrogenase (97.4%) Transferred entry: 1.3.5.1 (2.6%)" GO:0009061 (19.1%) GO:0005886 (19.1%) "GO:0009055 (19.1%) GO:0050660 (19.1%) GO:0000104 (14.4%)" anaerobic respiration (19.1%) plasma membrane (19.1%) "electron transfer activity (19.1%) flavin adenine dinucleotide binding (19.1%) succinate dehydrogenase activity (14.4%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" ELIESLLELANVFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.15 (100%) ribokinase (100%) "GO:0016301 (77.8%) GO:0004747 (22.2%)" "kinase activity (77.8%) ribokinase activity (22.2%)" "IPR002173 (25%) IPR011611 (25%) IPR029056 (25%)" "Carbohydrate/purine kinase, PfkB, conserved site (25%) Carbohydrate kinase PfkB (25%) Ribokinase-like (25%)" MVASLHSLQNLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 4.2.1.17 (100%) enoyl-CoA hydratase (100%) GO:0004300 (100%) enoyl-CoA hydratase activity (100%) "IPR002539 (33.3%) IPR029069 (33.3%) IPR039375 (33.3%)" "MaoC-like dehydratase domain (33.3%) HotDog domain superfamily (33.3%) Nodulation protein N-like (33.3%)" GMEELTSDIPNVSEEATKDLDENGIVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (19.9%) GO:0000428 (20.1%) "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (19.9%)" DNA-templated transcription (19.9%) DNA-directed RNA polymerase complex (20.1%) "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (19.9%)" "IPR007120 (7.9%) IPR015712 (7.9%) IPR010243 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) DNA-directed RNA polymerase, subunit 2 (7.9%) DNA-directed RNA polymerase beta subunit, bacterial-type (7.9%)" EANIINVDTYEEFKEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.1%) IPR004154 (11.1%) IPR004499 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Anticodon-binding (11.1%) Proline-tRNA ligase, class IIa, archaeal-type (11.1%)" KWNPAMAPYIFMER Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (33.3%) "GO:0022627 (33.3%) GO:0005840 (0.2%)" GO:0003735 (33.3%) translation (33.3%) "cytosolic small ribosomal subunit (33.3%) ribosome (0.2%)" structural constituent of ribosome (33.3%) "IPR001865 (25.2%) IPR005706 (25.2%) IPR023591 (25.2%)" "Small ribosomal subunit protein uS2 (25.2%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.2%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.2%)" AVAEACGSQAVIVR root "2.7.3.9 (99.9%) 2.7.-.- (0.1%)" "phosphoenolpyruvate--protein phosphotransferase (99.9%) Transferring phosphorus-containing groups (0.1%)" "GO:0009401 (19.9%) GO:0015764 (0.1%)" "GO:0005737 (19.9%) GO:0005829 (0%)" "GO:0008965 (20%) GO:0016301 (19.9%) GO:0046872 (19.9%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (19.9%) N-acetylglucosamine transport (0.1%)" "cytoplasm (19.9%) cytosol (0%)" "phosphoenolpyruvate-protein phosphotransferase activity (20%) kinase activity (19.9%) metal ion binding (19.9%)" "IPR000121 (8.5%) IPR015813 (8.5%) IPR040442 (8.5%)" "PEP-utilising enzyme, C-terminal (8.5%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (8.5%) Pyruvate kinase-like domain superfamily (8.5%)" IQELTDKIYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) GO:0033178 (48.5%) "GO:0046961 (48.5%) GO:0016787 (3%)" proton-transporting two-sector ATPase complex, catalytic domain (48.5%) "proton-transporting ATPase activity, rotational mechanism (48.5%) hydrolase activity (3%)" "IPR002842 (98%) IPR028987 (2%)" "V-type ATPase subunit E (98%) F-type ATP synthase subunit B-like, membrane domain superfamily (2%)" GILDSELGITPENNGEVIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006415 (33.3%) GO:0005737 (33.3%) GO:0043023 (33.3%) translational termination (33.3%) cytoplasm (33.3%) ribosomal large subunit binding (33.3%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" ATNAGVSNYLSHH Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" DTYADPAQWDEKAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.2%) GO:0005829 (18.2%) "GO:0004612 (18.2%) GO:0005524 (18.2%) GO:0046872 (18.2%)" gluconeogenesis (18.2%) cytosol (18.2%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.2%) ATP binding (18.2%) metal ion binding (18.2%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" VGIGHGNLAAR Pseudomonadati Bacteria Pseudomonadati IPR025964 (100%) GGGtGRT protein (100%) EAKDMVDGAPSVVKEGLAKDEAESLKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.5%)" "GO:0003729 (24.9%) GO:0003735 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.5%)" "mRNA binding (24.9%) structural constituent of ribosome (24.9%)" "IPR000206 (20.1%) IPR013823 (20.1%) IPR014719 (20.1%)" "Large ribosomal subunit protein bL12 (20.1%) Large ribosomal subunit protein bL12, C-terminal (20.1%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20.1%)" GANRDFSFIIK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "2.6.1.- (96.8%) 2.6.1.1 (3.2%)" "Transaminases (96.8%) aspartate transaminase (3.2%)" "GO:0033585 (16.6%) GO:0009094 (0%)" "GO:0005829 (16.6%) GO:0005737 (0%)" "GO:0004069 (16.6%) GO:0004838 (16.6%) GO:0030170 (16.6%)" "L-phenylalanine biosynthetic process from chorismate via phenylpyruvate (16.6%) L-phenylalanine biosynthetic process (0%)" "cytosol (16.6%) cytoplasm (0%)" "L-aspartate:2-oxoglutarate aminotransferase activity (16.6%) L-tyrosine-2-oxoglutarate transaminase activity (16.6%) pyridoxal phosphate binding (16.6%)" "IPR000796 (16.8%) IPR004839 (16.8%) IPR015422 (16.7%)" "Aspartate/other aminotransferase (16.8%) Aminotransferase, class I/classII, large domain (16.8%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" GYEEVEQVINNYNMGFITNNER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" METAENKYITVAYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0042026 (33%) GO:0005737 (33%) "GO:0003755 (33%) GO:0016853 (1.1%)" protein refolding (33%) cytoplasm (33%) "peptidyl-prolyl cis-trans isomerase activity (33%) isomerase activity (1.1%)" "IPR001179 (33.3%) IPR046357 (33.3%) IPR048261 (33.3%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) PPIase chaperone SlpA/SlyD-like, insertion domain superfamily (33.3%)" KLLDIGDFVGIK Pseudomonadati Bacteria Pseudomonadati 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004824 (16.7%) GO:0005524 (16.7%)" lysyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) lysine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR004364 (11.7%) IPR004365 (11.7%) IPR006195 (11.7%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (11.7%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.7%) Aminoacyl-tRNA synthetase, class II (11.7%)" DLGILTVAVVTKPFNFEGK root 3.4.24.- (100%) Metalloendopeptidases (100%) "GO:0000917 (14.2%) GO:0043093 (13.6%) GO:0051258 (13.6%)" "GO:0005737 (14.4%) GO:0032153 (14.4%) GO:0005886 (0.1%)" "GO:0003924 (14.4%) GO:0005525 (14.4%) GO:0016787 (0%)" "division septum assembly (14.2%) FtsZ-dependent cytokinesis (13.6%) protein polymerization (13.6%)" "cytoplasm (14.4%) cell division site (14.4%) plasma membrane (0.1%)" "GTPase activity (14.4%) GTP binding (14.4%) hydrolase activity (0%)" "IPR003008 (11.3%) IPR036525 (11.3%) IPR045061 (11.3%)" "Tubulin/FtsZ, GTPase domain (11.3%) Tubulin/FtsZ, GTPase domain superfamily (11.3%) Tubulin-like protein FtsZ/CetZ (11.3%)" TVAVVGGGDTACEEAVYLAGLAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.8.1.9 (100%) thioredoxin-disulfide reductase (NADPH) (100%) GO:0019430 (33.3%) GO:0005737 (33.3%) GO:0004791 (33.3%) removal of superoxide radicals (33.3%) cytoplasm (33.3%) thioredoxin-disulfide reductase (NADPH) activity (33.3%) "IPR005982 (20%) IPR008255 (20%) IPR023753 (20%)" "Thioredoxin reductase (20%) Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (20%) FAD/NAD(P)-binding domain (20%)" CHFLDLPFYETGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0006044 (31.8%) GO:0005975 (31.5%)" "GO:0004342 (33.1%) GO:0016853 (3.5%)" "N-acetylglucosamine metabolic process (31.8%) carbohydrate metabolic process (31.5%)" "glucosamine-6-phosphate deaminase activity (33.1%) isomerase activity (3.5%)" "IPR003737 (15.3%) IPR024078 (15.3%) IPR052960 (15.3%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (15.3%) Putative deacetylase LmbE-like domain superfamily (15.3%) Glucosamine-6-phosphate deaminase-like (15.3%)" SFASDNNSGVHPR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.1.2.48 (100%) low-specificity L-threonine aldolase (100%) GO:0006520 (42.1%) "GO:0016829 (42.1%) GO:0008483 (15.8%)" amino acid metabolic process (42.1%) "lyase activity (42.1%) transaminase activity (15.8%)" "IPR001597 (25%) IPR015421 (25%) IPR015422 (25%)" "Aromatic amino acid beta-eliminating lyase/threonine aldolase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%) Pyridoxal phosphate-dependent transferase, small domain (25%)" AVLPNPQDLGENYEGETSIGCR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.5.1.7 (48%) 1.5.1.43 (28%) 1.-.-.- (16%)" "saccharopine dehydrogenase (NAD(+), L-lysine-forming) (48%) carboxynorspermidine synthase (28%) Oxidoreductases (16%)" GO:0016020 (3.6%) "GO:0004754 (32.1%) GO:0016491 (32.1%) GO:0102143 (25%)" membrane (3.6%) "saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (32.1%) oxidoreductase activity (32.1%) carboxynorspermidine dehydrogenase activity (25%)" "IPR032095 (33.7%) IPR005097 (33.3%) IPR036291 (33%)" "Saccharopine dehydrogenase-like, C-terminal (33.7%) Saccharopine dehydrogenase, NADP binding domain (33.3%) NAD(P)-binding domain superfamily (33%)" EVLGKEWLSNELFR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (24.6%) GO:0016052 (24.6%)" GO:0005737 (24.6%) "GO:0004139 (24.6%) GO:0016829 (1.8%)" "deoxyribonucleotide catabolic process (24.6%) carbohydrate catabolic process (24.6%)" cytoplasm (24.6%) "deoxyribose-phosphate aldolase activity (24.6%) lyase activity (1.8%)" "IPR002915 (33.3%) IPR011343 (33.3%) IPR013785 (33.3%)" "DeoC/FbaB/LacD aldolase (33.3%) Deoxyribose-phosphate aldolase (33.3%) Aldolase-type TIM barrel (33.3%)" KYEDLCDHCSNMEQVAANAER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.13.1 (100%) exoribonuclease II (100%) GO:0006402 (25%) GO:0005829 (25%) "GO:0003723 (25%) GO:0008859 (25%)" mRNA catabolic process (25%) cytosol (25%) "RNA binding (25%) exoribonuclease II activity (25%)" "IPR001900 (11.1%) IPR003029 (11.1%) IPR004476 (11.1%)" "Ribonuclease II/R (11.1%) S1 domain (11.1%) Ribonuclease II/ribonuclease R (11.1%)" NFQENDIYLPIVVLEELDKFKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR051451 (25%)" "PIN domain (25%) PhoH-like protein (25%) PhoH2-like (25%)" IIQAGGFTSVNTGGVPDANAIPIPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.3.99.1 (100%) Deleted entry (100%) "GO:0009060 (24.2%) GO:0022904 (24.2%)" "GO:0009055 (24.2%) GO:0051537 (24.2%) GO:0016491 (3%)" "aerobic respiration (24.2%) respiratory electron transport chain (24.2%)" "electron transfer activity (24.2%) 2 iron, 2 sulfur cluster binding (24.2%) oxidoreductase activity (3%)" "IPR006058 (14.3%) IPR009051 (14.3%) IPR012675 (14.3%)" "2Fe-2S ferredoxin, iron-sulphur binding site (14.3%) Alpha-helical ferredoxin (14.3%) Beta-grasp domain superfamily (14.3%)" VALVTGHIPLSQVASSINVGDIVNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.262 (100%) 4-hydroxythreonine-4-phosphate dehydrogenase (100%) "GO:0046872 (33.3%) GO:0051287 (33.3%) GO:0016491 (22.2%)" "metal ion binding (33.3%) NAD binding (33.3%) oxidoreductase activity (22.2%)" IPR005255 (100%) PdxA family (100%) LTPEQNLIATVHYLDALEWQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.12.99.6 (100%) hydrogenase (acceptor) (100%) GO:0030313 (32.1%) "GO:0008901 (32.1%) GO:0016151 (32.1%) GO:0033748 (3.6%)" cell envelope (32.1%) "ferredoxin hydrogenase activity (32.1%) nickel cation binding (32.1%) hydrogenase (acceptor) activity (3.6%)" "IPR001501 (25%) IPR018194 (25%) IPR029014 (25%)" "Nickel-dependent hydrogenase, large subunit (25%) Nickel-dependent hydrogenase, large subunit, nickel binding site (25%) [NiFe]-hydrogenase, large subunit (25%)" NVNYIAGELFSECLINSK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis VTALNEELTMAPR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.54 (100%) cyclomaltodextrinase (100%) GO:0005975 (48.8%) "GO:0016798 (43.9%) GO:0047798 (4.9%) GO:0016787 (2.4%)" carbohydrate metabolic process (48.8%) "hydrolase activity, acting on glycosyl bonds (43.9%) cyclomaltodextrinase activity (4.9%) hydrolase activity (2.4%)" "IPR006047 (14.3%) IPR013780 (14.3%) IPR013783 (14.3%)" "Glycosyl hydrolase family 13, catalytic domain (14.3%) Glycosyl hydrolase, all-beta (14.3%) Immunoglobulin-like fold (14.3%)" SAVGYQPTLATEMGAMQER root "7.1.2.2 (99.5%) 3.6.3.14 (0.5%)" "H(+)-transporting two-sector ATPase (99.5%) Transferred entry: 7.1.2.2 (0.5%)" GO:0042776 (0%) "GO:0045259 (24%) GO:0005886 (23.5%) GO:0005739 (0%)" "GO:0005524 (24%) GO:0046933 (24%) GO:0016787 (4.3%)" proton motive force-driven mitochondrial ATP synthesis (0%) "proton-transporting ATP synthase complex (24%) plasma membrane (23.5%) mitochondrion (0%)" "ATP binding (24%) proton-transporting ATP synthase activity, rotational mechanism (24%) hydrolase activity (4.3%)" "IPR000194 (10%) IPR050053 (10%) IPR027417 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) ATPase alpha/beta chains (10%) P-loop containing nucleoside triphosphate hydrolase (10%)" ESGEFDLHKEGGHSEFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.3.16 (100%) L-aspartate oxidase (100%) GO:0034628 (33.3%) GO:0005737 (33.3%) GO:0008734 (33.3%) 'de novo' NAD+ biosynthetic process from L-aspartate (33.3%) cytoplasm (33.3%) L-aspartate oxidase activity (33.3%) "IPR003953 (16.7%) IPR005288 (16.7%) IPR015939 (16.7%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (16.7%) L-aspartate oxidase (16.7%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (16.7%)" TVRPGDFVVCNLASLSLGHLPLEDEEQIKEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) GO:0009263 (25%) GO:0005971 (25%) "GO:0004748 (25%) GO:0005524 (25%)" deoxyribonucleotide biosynthetic process (25%) ribonucleoside-diphosphate reductase complex (25%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (25%) ATP binding (25%)" "IPR000788 (16.7%) IPR005144 (16.7%) IPR008926 (16.7%)" "Ribonucleotide reductase large subunit, C-terminal (16.7%) ATP-cone domain (16.7%) Ribonucleotide reductase R1 subunit, N-terminal (16.7%)" AAAWALLSR Bacteria Bacteria GO:0006352 (2%) "GO:0009279 (92%) GO:0016020 (2%)" "GO:0003677 (2%) GO:0016987 (2%)" DNA-templated transcription initiation (2%) "cell outer membrane (92%) membrane (2%)" "DNA binding (2%) sigma factor activity (2%)" "IPR011990 (31.8%) IPR012944 (31.8%) IPR033985 (31.8%)" "Tetratricopeptide-like helical domain superfamily (31.8%) RagB/SusD domain (31.8%) SusD-like, N-terminal (31.8%)" AGGNYLSSLLVGSEAR root 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009098 (15%) GO:0009099 (15%) GO:0006532 (14.9%)" GO:0005829 (14.9%) "GO:0004084 (9%) GO:0052654 (6%) GO:0052655 (6%)" "L-leucine biosynthetic process (15%) L-valine biosynthetic process (15%) aspartate biosynthetic process (14.9%)" cytosol (14.9%) "branched-chain-amino-acid transaminase activity (9%) L-leucine-2-oxoglutarate transaminase activity (6%) L-valine-2-oxoglutarate transaminase activity (6%)" "IPR001544 (12.6%) IPR036038 (12.6%) IPR043132 (12.6%)" "Aminotransferase class IV (12.6%) Aminotransferase-like, PLP-dependent enzymes (12.6%) Branched-chain-amino-acid aminotransferase-like, C-terminal (12.6%)" MNVSAMAVMLAIGDEAHEAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.245 (77.8%) 4.1.2.- (22.2%)" "3-hydroxy-5-phosphooxypentane-2,4-dione thiolase (77.8%) Aldehyde-lyases (22.2%)" "GO:0004332 (72.7%) GO:0016746 (27.3%)" "fructose-bisphosphate aldolase activity (72.7%) acyltransferase activity (27.3%)" "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" LEHIEATETEGITALPGAIALLSHLNK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "3.1.3.- (66.7%) 3.1.3.23 (16.7%) 3.1.3.22 (8.3%)" "Phosphoric monoester hydrolases (66.7%) sugar-phosphatase (16.7%) mannitol-1-phosphatase (8.3%)" GO:0005975 (1.9%) "GO:0043136 (29.6%) GO:0050308 (29.6%) GO:0046872 (25.9%)" carbohydrate metabolic process (1.9%) "sn-glycerol 3-phosphatase activity (29.6%) sugar-phosphatase activity (29.6%) metal ion binding (25.9%)" "IPR023214 (20.7%) IPR036412 (20.7%) IPR051806 (20.7%)" "HAD superfamily (20.7%) HAD-like superfamily (20.7%) HAD-like Sugar Phosphate Phosphatase (20.7%)" EVLKEADPELK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (48.1%) GO:0003746 (51.9%) cytoplasm (48.1%) translation elongation factor activity (51.9%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" MLDKSEMIFGVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.1.1.- (100%) Methyltransferases (100%) "GO:0006396 (20%) GO:0032259 (20%)" GO:0005829 (20%) "GO:0003723 (20%) GO:0008173 (20%)" "RNA processing (20%) methylation (20%)" cytosol (20%) "RNA binding (20%) RNA methyltransferase activity (20%)" "IPR001537 (16.7%) IPR004441 (16.7%) IPR013123 (16.7%)" "tRNA/rRNA methyltransferase, SpoU type (16.7%) RNA methyltransferase TrmH (16.7%) RNA 2-O ribose methyltransferase, substrate binding (16.7%)" ELQSLGVQPDIIVLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (12.5%) GO:0044210 (12%) GO:0006241 (0.5%)" "GO:0005829 (12.5%) GO:0097268 (9.1%)" "GO:0003883 (12.5%) GO:0005524 (12.5%) GO:0042802 (12.5%)" "pyrimidine nucleobase biosynthetic process (12.5%) 'de novo' CTP biosynthetic process (12%) CTP biosynthetic process (0.5%)" "cytosol (12.5%) cytoophidium (9.1%)" "CTP synthase activity (12.5%) ATP binding (12.5%) identical protein binding (12.5%)" "IPR004468 (17%) IPR017456 (17%) IPR027417 (17%)" "CTP synthase (17%) CTP synthase, N-terminal (17%) P-loop containing nucleoside triphosphate hydrolase (17%)" DICSQQIEEEDAEELKKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0043093 (30.2%) GO:0051301 (3.2%)" "GO:0009898 (33.3%) GO:0032153 (33.3%)" "FtsZ-dependent cytokinesis (30.2%) cell division (3.2%)" "cytoplasmic side of plasma membrane (33.3%) cell division site (33.3%)" "IPR003494 (25.3%) IPR043129 (25.3%) IPR050696 (25.3%)" "SHS2 domain inserted in FtsA (25.3%) ATPase, nucleotide binding domain (25.3%) Bacterial cell division protein FtsA/MreB (25.3%)" ALWPEQTATTGDYRVVFK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.5.2.17 (100%) hydroxyisourate hydrolase (100%) "GO:0006144 (33.8%) GO:0051289 (0.3%)" "GO:0042597 (31.7%) GO:0032991 (0.3%)" "GO:0033971 (32.8%) GO:0016787 (0.7%) GO:0042802 (0.3%)" "purine nucleobase metabolic process (33.8%) protein homotetramerization (0.3%)" "periplasmic space (31.7%) protein-containing complex (0.3%)" "hydroxyisourate hydrolase activity (32.8%) hydrolase activity (0.7%) identical protein binding (0.3%)" "IPR023416 (17.1%) IPR036817 (17.1%) IPR000895 (17%)" "Transthyretin/hydroxyisourate hydrolase domain (17.1%) Transthyretin/hydroxyisourate hydrolase domain superfamily (17.1%) Transthyretin/hydroxyisourate hydrolase (17%)" LEWLHDSKFWINVAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" AISGELEPTKGSVVLGPGER Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003439 (20.5%) IPR027417 (20.5%) IPR051309 (20.5%)" "ABC transporter-like, ATP-binding domain (20.5%) P-loop containing nucleoside triphosphate hydrolase (20.5%) ABC transporter ABCF subfamily ATPase (20.5%)" QAGELAGLKVER Bacteria Bacteria "GO:0005737 (16%) GO:0070013 (1.3%)" "GO:0005524 (28.7%) GO:0140662 (28.7%) GO:0051082 (25.1%)" "cytoplasm (16%) intracellular organelle lumen (1.3%)" "ATP binding (28.7%) ATP-dependent protein folding chaperone (28.7%) unfolded protein binding (25.1%)" "IPR013126 (17.2%) IPR018181 (17.2%) IPR043129 (17.2%)" "Heat shock protein 70 family (17.2%) Heat shock protein 70, conserved site (17.2%) ATPase, nucleotide binding domain (17.2%)" AEYRNEGTVYPLSQHGFAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005975 (33.3%) "GO:0016853 (33.3%) GO:0030246 (33.3%)" carbohydrate metabolic process (33.3%) "isomerase activity (33.3%) carbohydrate binding (33.3%)" "IPR008183 (25%) IPR011013 (25%) IPR014718 (25%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (25%) Galactose mutarotase-like domain superfamily (25%) Glycoside hydrolase-type carbohydrate-binding (25%)" SYQGEVVFSPGYSVGYLAQEPHLDDEKTVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.6.1.- (100%) In phosphorus-containing anhydrides (100%) "GO:0045900 (12.8%) GO:0006412 (12%)" GO:0005737 (12%) "GO:0000049 (12.8%) GO:0005524 (12.8%) GO:0016887 (12.8%)" "negative regulation of translational elongation (12.8%) translation (12%)" cytoplasm (12%) "tRNA binding (12.8%) ATP binding (12.8%) ATP hydrolysis activity (12.8%)" "IPR003439 (16.9%) IPR003593 (16.9%) IPR017871 (16.9%)" "ABC transporter-like, ATP-binding domain (16.9%) AAA+ ATPase domain (16.9%) ABC transporter-like, conserved site (16.9%)" SATPAQAQAVHK root 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0019563 (16.6%)" "GO:0005829 (16.6%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0004807 (16.6%) GO:0016853 (0.2%) GO:0042802 (0%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) glycerol catabolic process (16.6%)" "cytosol (16.6%) cytoplasm (0%) membrane (0%)" "triose-phosphate isomerase activity (16.6%) isomerase activity (0.2%) identical protein binding (0%)" "IPR000652 (20.1%) IPR013785 (20.1%) IPR035990 (20.1%)" "Triosephosphate isomerase (20.1%) Aldolase-type TIM barrel (20.1%) Triosephosphate isomerase superfamily (20.1%)" AHPDVELYTASIDKGLNEHGYIIPGLGDAGDKIFGTK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.4.2.9 (100%) uracil phosphoribosyltransferase (100%) "GO:0006223 (16.8%) GO:0044206 (16.8%)" GO:0005737 (15.9%) "GO:0000287 (16.8%) GO:0004845 (16.8%) GO:0005525 (16.8%)" "uracil salvage (16.8%) UMP salvage (16.8%)" cytoplasm (15.9%) "magnesium ion binding (16.8%) uracil phosphoribosyltransferase activity (16.8%) GTP binding (16.8%)" "IPR000836 (20%) IPR005765 (20%) IPR029057 (20%)" "Phosphoribosyltransferase domain (20%) Uracil phosphoribosyl transferase (20%) Phosphoribosyltransferase-like (20%)" YAADRFITIVPEIELPGHEMAAIAAYPELSCEGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) "GO:0005975 (25%) GO:0030203 (25%)" GO:0016020 (25%) GO:0004563 (25%) "carbohydrate metabolic process (25%) glycosaminoglycan metabolic process (25%)" membrane (25%) beta-N-acetylhexosaminidase activity (25%) "IPR011658 (16.7%) IPR015882 (16.7%) IPR015883 (16.7%)" "PA14 domain (16.7%) Beta-hexosaminidase, bacterial type, N-terminal (16.7%) Glycoside hydrolase family 20, catalytic domain (16.7%)" YLDNDFCTIDKPAYSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.234 (100%) N(6)-L-threonylcarbamoyladenine synthase (100%) "GO:0002949 (20.5%) GO:0006508 (8%)" GO:0005737 (20.5%) "GO:0005506 (20.5%) GO:0061711 (18.2%) GO:0008233 (8%)" "tRNA threonylcarbamoyladenosine modification (20.5%) proteolysis (8%)" cytoplasm (20.5%) "iron ion binding (20.5%) tRNA N(6)-L-threonylcarbamoyladenine synthase activity (18.2%) peptidase activity (8%)" "IPR000905 (20.7%) IPR043129 (20.7%) IPR017860 (19.6%)" "Gcp-like domain (20.7%) ATPase, nucleotide binding domain (20.7%) Peptidase M22, conserved site (19.6%)" VSIFSSQASSLIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.7 (100%) DNA-directed DNA polymerase (100%) GO:0006271 (16.6%) "GO:0005737 (16.6%) GO:0009360 (16.6%)" "GO:0003677 (16.6%) GO:0003887 (16.6%) GO:0008408 (16.6%)" DNA strand elongation involved in DNA replication (16.6%) "cytoplasm (16.6%) DNA polymerase III complex (16.6%)" "DNA binding (16.6%) DNA-directed DNA polymerase activity (16.6%) 3'-5' exonuclease activity (16.6%)" "IPR001001 (20%) IPR022635 (20%) IPR022637 (20%)" "DNA polymerase III, beta sliding clamp (20%) DNA polymerase III, beta sliding clamp, C-terminal (20%) DNA polymerase III, beta sliding clamp, central (20%)" SALQYAASVAGLMITTECMVTDLPK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.1%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (16.4%) GO:1990220 (0%) GO:0005829 (0%)" "GO:0140662 (17.1%) GO:0005524 (17%) GO:0016853 (16.7%)" "protein refolding (17.1%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (16.4%) GroEL-GroES complex (0%) cytosol (0%)" "ATP-dependent protein folding chaperone (17.1%) ATP binding (17%) isomerase activity (16.7%)" "IPR027413 (16.9%) IPR001844 (16.8%) IPR002423 (16.7%)" "GroEL-like equatorial domain superfamily (16.9%) Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%)" ILSDPEATDNDKYVALTFLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" SIEATEDFFHFMGLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (25%) IPR018211 (25%) IPR044731 (25%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (25%) Alcohol dehydrogenase, iron-type, conserved site (25%) Butanol dehydrogenase-like (25%)" AAGKDANLLMNIGPQPDGELPEVAVQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006004 (25%) GO:0016139 (25%)" GO:0005764 (25%) GO:0004560 (25%) "fucose metabolic process (25%) glycoside catabolic process (25%)" lysosome (25%) alpha-L-fucosidase activity (25%) "IPR000933 (33.3%) IPR016286 (33.3%) IPR017853 (33.3%)" "Glycoside hydrolase, family 29 (33.3%) Alpha-L-fucosidase, metazoa-type (33.3%) Glycoside hydrolase superfamily (33.3%)" AGIEHGLLYNQEQR root 6.1.1.21 (100%) histidine--tRNA ligase (100%) "GO:0006427 (25%) GO:0032543 (0%)" "GO:0005737 (24.9%) GO:0005739 (0%) GO:0005829 (0%)" "GO:0004821 (25%) GO:0005524 (24.5%) GO:0016874 (0.3%)" "histidyl-tRNA aminoacylation (25%) mitochondrial translation (0%)" "cytoplasm (24.9%) mitochondrion (0%) cytosol (0%)" "histidine-tRNA ligase activity (25%) ATP binding (24.5%) ligase activity (0.3%)" "IPR004516 (12.7%) IPR006195 (12.7%) IPR041715 (12.7%)" "Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit (12.7%) Aminoacyl-tRNA synthetase, class II (12.7%) Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain (12.7%)" GVIANPNCTTIQMVVALK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000534 (19.3%) IPR005986 (19.3%) IPR012280 (19.3%)" "Semialdehyde dehydrogenase, NAD-binding (19.3%) Aspartate-semialdehyde dehydrogenase, beta-type (19.3%) Semialdehyde dehydrogenase, dimerisation domain (19.3%)" VVFAEGIHPTMLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (17.4%) "GO:0016746 (17.4%) GO:0046872 (17.4%) GO:0051287 (17.4%)" malate metabolic process (17.4%) "acyltransferase activity (17.4%) metal ion binding (17.4%) NAD binding (17.4%)" "IPR002505 (9.1%) IPR012188 (9.1%) IPR012301 (9.1%)" "Phosphate acetyl/butaryl transferase (9.1%) NAD(P)-dependent malic enzyme (9.1%) Malic enzyme, N-terminal domain (9.1%)" LIFDFLDPDKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.2.1.22 (50%) 3.2.1.20 (25%) 3.2.1.3 (25%)" "alpha-galactosidase (50%) alpha-glucosidase (25%) glucan 1,4-alpha-glucosidase (25%)" "GO:0030246 (57.1%) GO:0016787 (33.3%) GO:0004557 (4.8%)" "carbohydrate binding (57.1%) hydrolase activity (33.3%) alpha-galactosidase activity (4.8%)" "IPR019563 (14.5%) IPR029483 (14.5%) IPR029486 (14.5%)" "Glycosyl-hydrolase 97, catalytic domain (14.5%) Glycosyl-hydrolase 97, C-terminal oligomerisation domain (14.5%) Glycosyl-hydrolase 97, N-terminal domain (14.5%)" ILGMGDIVSLVER Bacteria Bacteria 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) "GO:0006614 (18.9%) GO:0007017 (0%)" "GO:0048500 (18%) GO:0005886 (5.6%) GO:0005786 (0.9%)" "GO:0003924 (18.9%) GO:0005525 (18.9%) GO:0008312 (18.9%)" "SRP-dependent cotranslational protein targeting to membrane (18.9%) microtubule-based process (0%)" "signal recognition particle (18%) plasma membrane (5.6%) signal recognition particle, endoplasmic reticulum targeting (0.9%)" "GTPase activity (18.9%) GTP binding (18.9%) 7S RNA binding (18.9%)" "IPR000897 (11.2%) IPR004125 (11.2%) IPR022941 (11.2%)" "Signal recognition particle, SRP54 subunit, GTPase domain (11.2%) Signal recognition particle, SRP54 subunit, M-domain (11.2%) Signal recognition particle, SRP54 subunit (11.2%)" SDLSELSLSDLKGKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" AAEEIGQLVTVAREELQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae FKYFLSQALGCNANEVEGMVIGGHGDTTMIPLTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (24.7%) GO:0006099 (24.2%) GO:0019752 (0.5%)" GO:0005737 (0.5%) "GO:0030060 (25.3%) GO:0004459 (24.7%)" "lactate metabolic process (24.7%) tricarboxylic acid cycle (24.2%) carboxylic acid metabolic process (0.5%)" cytoplasm (0.5%) "L-malate dehydrogenase (NAD+) activity (25.3%) L-lactate dehydrogenase (NAD+) activity (24.7%)" "IPR001236 (16.8%) IPR011275 (16.8%) IPR022383 (16.8%)" "Lactate/malate dehydrogenase, N-terminal (16.8%) Malate dehydrogenase, type 3 (16.8%) Lactate/malate dehydrogenase, C-terminal (16.8%)" RIDGISNVNDESDRSGMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006261 (12.5%) GO:0006265 (12.5%)" "GO:0005694 (12.5%) GO:0005737 (12.5%) GO:0009330 (12.5%)" "GO:0003677 (12.5%) GO:0005524 (12.5%) GO:0034335 (12.5%)" "DNA-templated DNA replication (12.5%) DNA topological change (12.5%)" "chromosome (12.5%) cytoplasm (12.5%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.5%)" "DNA binding (12.5%) ATP binding (12.5%) DNA negative supercoiling activity (12.5%)" "IPR002205 (12.5%) IPR005743 (12.5%) IPR006691 (12.5%)" "DNA topoisomerase, type IIA, domain A (12.5%) DNA gyrase, subunit A (12.5%) DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.5%)" THNQGVFDVYTPDILR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (30.7%) GO:0005975 (0%) GO:0044814 (0%)" "GO:0005829 (32.1%) GO:0016020 (0%)" "GO:0008861 (32.1%) GO:0016829 (4.6%) GO:0016746 (0.4%)" "glucose metabolic process (30.7%) carbohydrate metabolic process (0%) pyruvate fermentation via PFL (0%)" "cytosol (32.1%) membrane (0%)" "formate C-acetyltransferase activity (32.1%) lyase activity (4.6%) acyltransferase activity (0.4%)" "IPR004184 (20.6%) IPR050244 (20.6%) IPR005949 (19.7%)" "Pyruvate formate lyase domain (20.6%) Autonomous Glycyl Radical Cofactor (20.6%) Formate acetyltransferase (19.7%)" YYFPDGHSIILLADGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.13.2.1 (87.5%) 3.3.1.1 (12.5%)" "adenosylhomocysteinase (87.5%) Transferred entry: 3.13.2.1 (12.5%)" "GO:0006730 (20.4%) GO:0033353 (20.4%) GO:0071269 (18.2%)" GO:0005829 (20.4%) "GO:0004013 (20.4%) GO:0016787 (0.2%)" "one-carbon metabolic process (20.4%) S-adenosylmethionine cycle (20.4%) L-homocysteine biosynthetic process (18.2%)" cytosol (20.4%) "adenosylhomocysteinase activity (20.4%) hydrolase activity (0.2%)" "IPR000043 (20.1%) IPR015878 (20.1%) IPR036291 (20.1%)" "Adenosylhomocysteinase-like (20.1%) S-adenosyl-L-homocysteine hydrolase, NAD binding domain (20.1%) NAD(P)-binding domain superfamily (20.1%)" DKNVVGVTTNPSIFQK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (25%)" GO:0005737 (25%) GO:0004801 (25%) "carbohydrate metabolic process (25%) pentose-phosphate shunt (25%)" cytoplasm (25%) transaldolase activity (25%) "IPR001585 (25%) IPR004732 (25%) IPR013785 (25%)" "Transaldolase/Fructose-6-phosphate aldolase (25%) Transaldolase type 2 (25%) Aldolase-type TIM barrel (25%)" GWVYNFSEVGDETPNAPAIPAGHGPIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.3.1.- (100%) Interconverting aldoses and ketoses (100%) GO:0016853 (100%) isomerase activity (100%) IPR014710 (100%) RmlC-like jelly roll fold (100%) FNQFSASHSYFSWLGTSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (20%) IPR011053 (20%) IPR022615 (20%)" "Na(+)-translocating NADH-quinone reductase subunit A (20%) Single hybrid motif (20%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (20%)" KIKDSLPSGSMHR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0003677 (100%) DNA binding (100%) SDLASYVKPANYLGIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (47.5%) IPR024302 (47.5%) IPR041662 (4.9%)" "Tetratricopeptide-like helical domain superfamily (47.5%) SusD-like (47.5%) SusD-like 2 (4.9%)" TVILQSHVDMVCEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25.1%) GO:0005829 (25.1%) "GO:0070573 (25.1%) GO:0046872 (24.6%)" proteolysis (25.1%) cytosol (25.1%) "metallodipeptidase activity (25.1%) metal ion binding (24.6%)" "IPR001160 (30.3%) IPR002933 (29%) IPR011650 (28.3%)" "Peptidase M20C, Xaa-His dipeptidase (30.3%) Peptidase M20 (29%) Peptidase M20, dimerisation domain (28.3%)" EVSWLPSYGPEMR root "1.2.7.1 (34.5%) 1.2.7.3 (31%) 1.2.7.7 (17.2%)" "pyruvate synthase (34.5%) 2-oxoglutarate synthase (31%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) (17.2%)" GO:0044281 (4.2%) GO:0016020 (5.6%) "GO:0016625 (36.6%) GO:0016903 (35.2%) GO:0019164 (6.3%)" small molecule metabolic process (4.2%) membrane (5.6%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (36.6%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (35.2%) pyruvate synthase activity (6.3%)" "IPR002869 (28.1%) IPR019752 (28.1%) IPR052554 (26.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (28.1%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (28.1%) 2-oxoglutarate synthase subunit KorC (26.7%)" TKLVDMDLSVR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.8%) GO:0005737 (16.5%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.6%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.5%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.6%)" "IPR011260 (16.8%) IPR011263 (16.7%) IPR036603 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.8%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%) RNA polymerase, RBP11-like subunit (16.7%)" RNHPYIPGMEAPDFNYLSPVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.17.7.3 (100%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (100%) "GO:0016114 (17.4%) GO:0019288 (17.4%)" "GO:0005506 (17.4%) GO:0046429 (17.4%) GO:0051539 (17.4%)" "terpenoid biosynthetic process (17.4%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.4%)" "iron ion binding (17.4%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.4%) 4 iron, 4 sulfur cluster binding (17.4%)" "IPR004588 (25%) IPR011005 (25%) IPR017178 (25%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25%) Dihydropteroate synthase-like superfamily (25%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (25%)" SVNMPYVIER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.1%) "GO:0022627 (32.9%) GO:0005840 (0.8%)" GO:0003735 (33.1%) translation (33.1%) "cytosolic small ribosomal subunit (32.9%) ribosome (0.8%)" structural constituent of ribosome (33.1%) "IPR001865 (25.1%) IPR023591 (25.1%) IPR005706 (25%)" "Small ribosomal subunit protein uS2 (25.1%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.1%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%)" TVLAVEAAHAFSPEDTQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" SGKSELEAFEVALENVRPTVEVK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006412 (19.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0015935 (19.6%) GO:0005840 (0.7%) GO:0022627 (0.1%)" "GO:0003735 (19.8%) GO:0019843 (19.7%) GO:0000049 (19.5%)" "translation (19.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "small ribosomal subunit (19.6%) ribosome (0.7%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (19.8%) rRNA binding (19.7%) tRNA binding (19.5%)" "IPR023798 (20.1%) IPR036823 (20.1%) IPR000235 (20.1%)" "Small ribosomal subunit protein uS7 domain (20.1%) Small ribosomal subunit protein uS7 domain superfamily (20.1%) Small ribosomal subunit protein uS7 (20.1%)" LMEFLGNVVPGVSEMPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.1%) IPR000795 (7.1%) IPR005225 (7.1%)" "Elongation factor EFG, domain V-like (7.1%) Translational (tr)-type GTP-binding domain (7.1%) Small GTP-binding domain (7.1%)" EVADNTSILYGGSCKPSNAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%) GO:0019563 (16.5%)" "GO:0005829 (16.5%) GO:0016020 (0.6%)" GO:0004807 (16.5%) "gluconeogenesis (16.5%) glycolytic process (16.5%) glycerol catabolic process (16.5%)" "cytosol (16.5%) membrane (0.6%)" triose-phosphate isomerase activity (16.5%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" LGTTNLDNVTIKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR007160 (100%) Domain of unknown function DUF362 (100%) AYNDMEILGQTIDDAAGEAIDKCSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.234 (100%) N(6)-L-threonylcarbamoyladenine synthase (100%) "GO:0002949 (22%) GO:0006508 (4%) GO:0006400 (0.2%)" GO:0005737 (22%) "GO:0005506 (22%) GO:0061711 (19.4%) GO:0008233 (4%)" "tRNA threonylcarbamoyladenosine modification (22%) proteolysis (4%) tRNA modification (0.2%)" cytoplasm (22%) "iron ion binding (22%) tRNA N(6)-L-threonylcarbamoyladenine synthase activity (19.4%) peptidase activity (4%)" "IPR000905 (20.2%) IPR017861 (20.2%) IPR043129 (20.2%)" "Gcp-like domain (20.2%) Kae1/TsaD family (20.2%) ATPase, nucleotide binding domain (20.2%)" ESAPANASKEELSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis VLPVYGGSSIESQIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.6.4.13 (92.3%) 3.6.4.- (7.7%)" "RNA helicase (92.3%) Acting on ATP; involved in cellular and subcellular movement (7.7%)" "GO:0042255 (6.1%) GO:0009266 (5.4%) GO:0009409 (1%)" "GO:0005829 (17.3%) GO:0005840 (1%)" "GO:0003724 (17.3%) GO:0005524 (17.3%) GO:0016787 (17.3%)" "ribosome assembly (6.1%) response to temperature stimulus (5.4%) response to cold (1%)" "cytosol (17.3%) ribosome (1%)" "RNA helicase activity (17.3%) ATP binding (17.3%) hydrolase activity (17.3%)" "IPR001650 (11%) IPR005580 (11%) IPR011545 (11%)" "Helicase, C-terminal domain-like (11%) DEAD box helicase DbpA/CsdA, RNA-binding domain (11%) DEAD/DEAH-box helicase domain (11%)" ELVAQSLKDNGCIAYDIFESATR Candidatus Caccoplasma intestinavium Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Candidatus Caccoplasma Candidatus Caccoplasma intestinavium GO:0004497 (100%) monooxygenase activity (100%) "IPR007138 (33.3%) IPR011008 (33.3%) IPR050744 (33.3%)" "Antibiotic biosynthesis monooxygenase domain (33.3%) Dimeric alpha-beta barrel (33.3%) AI-2 Signaling Cycle Isomerase LsrG (33.3%)" LVSFAHVSNVLGTVNPAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.8.1.7 (100%) cysteine desulfurase (100%) GO:0006534 (32.1%) "GO:0030170 (32.1%) GO:0031071 (32.1%) GO:0008483 (2.6%)" cysteine metabolic process (32.1%) "pyridoxal phosphate binding (32.1%) cysteine desulfurase activity (32.1%) transaminase activity (2.6%)" "IPR000192 (16.7%) IPR010970 (16.7%) IPR015421 (16.7%)" "Aminotransferase class V domain (16.7%) Cysteine desulfurase, SufS (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" LMDLSINKNWIDKEEYPQSAAIDLR root 4.1.1.15 (100%) glutamate decarboxylase (100%) "GO:0006538 (21.8%) GO:0051454 (12.2%)" "GO:0005829 (21.8%) GO:0016020 (0.1%)" "GO:0004351 (21.8%) GO:0030170 (21.8%) GO:0016829 (0.4%)" "L-glutamate catabolic process (21.8%) intracellular pH elevation (12.2%)" "cytosol (21.8%) membrane (0.1%)" "glutamate decarboxylase activity (21.8%) pyridoxal phosphate binding (21.8%) lyase activity (0.4%)" "IPR002129 (21.6%) IPR010107 (21.6%) IPR015424 (21.6%)" "Pyridoxal phosphate-dependent decarboxylase (21.6%) Glutamate decarboxylase (21.6%) Pyridoxal phosphate-dependent transferase (21.6%)" IIELEGVPVLDPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.16.3.1 (100%) ferroxidase (100%) GO:0006879 (19.9%) GO:0005829 (19.9%) "GO:0004322 (19.9%) GO:0008199 (19.9%) GO:0020037 (19.9%)" intracellular iron ion homeostasis (19.9%) cytosol (19.9%) "ferroxidase activity (19.9%) ferric iron binding (19.9%) heme binding (19.9%)" "IPR008331 (16.8%) IPR009078 (16.8%) IPR012347 (16.8%)" "Ferritin/DPS domain (16.8%) Ferritin-like superfamily (16.8%) Ferritin-like (16.8%)" ILFDKGYILNYK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (17.1%) "GO:0005840 (17.1%) GO:1990904 (17.1%) GO:0005737 (15.9%)" "GO:0003735 (17.1%) GO:0019843 (15.9%)" translation (17.1%) "ribosome (17.1%) ribonucleoprotein complex (17.1%) cytoplasm (15.9%)" "structural constituent of ribosome (17.1%) rRNA binding (15.9%)" "IPR000630 (34.4%) IPR035987 (34.4%) IPR047863 (31.3%)" "Small ribosomal subunit protein uS8 (34.4%) Small ribosomal subunit protein uS8 superfamily (34.4%) Small ribosomal subunit protein uS8, conserved site (31.3%)" IADITGTQPLESTEFVEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.11.- (100%) Aminopeptidases (100%) GO:0006508 (44.4%) "GO:0008239 (44.4%) GO:0004177 (11.1%)" proteolysis (44.4%) "dipeptidyl-peptidase activity (44.4%) aminopeptidase activity (11.1%)" "IPR008761 (50%) IPR029058 (50%)" "Peptidase S37, tripeptidyl aminopeptidase (50%) Alpha/Beta hydrolase fold (50%)" TVTREDTPALR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (33.3%) GO:0015934 (33.3%) GO:0003735 (33.3%) translation (33.3%) large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR005996 (33.3%) IPR016082 (33.3%) IPR036919 (33.3%)" "Large ribosomal subunit protein uL30, bacteria (33.3%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (33.3%) Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily (33.3%)" QLTLDRDPHGNVQVSLIETEKLLSDMVAVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" SNPETTDIPVIIMSALSDMQSIVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.13.3 (100%) histidine kinase (100%) GO:0000155 (100%) phosphorelay sensor kinase activity (100%) "IPR001789 (14.5%) IPR003594 (14.5%) IPR004358 (14.5%)" "Signal transduction response regulator, receiver domain (14.5%) Histidine kinase/HSP90-like ATPase domain (14.5%) Signal transduction histidine kinase-related protein, C-terminal (14.5%)" ATKEPIKNEANNGLKNTR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (32.1%) GO:0061077 (0.4%)" "GO:0005737 (31.7%) GO:0005829 (0.4%)" "GO:0003755 (34.2%) GO:0016853 (1.3%)" "protein folding (32.1%) obsolete chaperone-mediated protein folding (0.4%)" "cytoplasm (31.7%) cytosol (0.4%)" "peptidyl-prolyl cis-trans isomerase activity (34.2%) isomerase activity (1.3%)" "IPR002130 (20.4%) IPR029000 (20.4%) IPR044665 (20.4%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (20.4%) Cyclophilin-like domain superfamily (20.4%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, E. coli cyclophilin A-like (20.4%)" LLEAVKDVNAIIIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.95 (66.7%) 1.1.1.290 (33.3%)" "phosphoglycerate dehydrogenase (66.7%) 4-phosphoerythronate dehydrogenase (33.3%)" "GO:0051287 (50%) GO:0016616 (40.9%) GO:0004617 (6.8%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (40.9%) phosphoglycerate dehydrogenase activity (6.8%)" "IPR006139 (34.4%) IPR006140 (32.8%) IPR036291 (32.8%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (34.4%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (32.8%) NAD(P)-binding domain superfamily (32.8%)" QVDTAEYNPDECIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 4.2.1.115 (100%) UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (100%) GO:0016829 (100%) lyase activity (100%) "IPR003869 (25%) IPR020025 (25%) IPR036291 (25%)" "Polysaccharide biosynthesis protein, CapD-like domain (25%) UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (25%) NAD(P)-binding domain superfamily (25%)" RSDREASEGCVLVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" TMNLGTVSEERR root "GO:0006355 (20%) GO:0000160 (0.2%) GO:0045892 (0%)" "GO:0005829 (19.9%) GO:0032993 (19.9%) GO:0005737 (0%)" "GO:0000156 (19.9%) GO:0000976 (19.9%) GO:0003677 (0.1%)" "regulation of DNA-templated transcription (20%) phosphorelay signal transduction system (0.2%) negative regulation of DNA-templated transcription (0%)" "cytosol (19.9%) protein-DNA complex (19.9%) cytoplasm (0%)" "phosphorelay response regulator activity (19.9%) transcription cis-regulatory region binding (19.9%) DNA binding (0.1%)" "IPR001789 (16.8%) IPR011006 (16.8%) IPR039420 (16.8%)" "Signal transduction response regulator, receiver domain (16.8%) CheY-like superfamily (16.8%) Transcriptional regulatory protein WalR-like (16.8%)" DGQAIGIGAGQQSR Bacteria Bacteria "2.1.2.3 (95.1%) 3.5.4.10 (4.9%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (95.1%) IMP cyclohydrolase (4.9%)" "GO:0006189 (24.9%) GO:0006164 (0%)" "GO:0005829 (24.9%) GO:0005840 (0%)" "GO:0003937 (25%) GO:0004643 (25%) GO:0016740 (0.1%)" "'de novo' IMP biosynthetic process (24.9%) purine nucleotide biosynthetic process (0%)" "cytosol (24.9%) ribosome (0%)" "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%) transferase activity (0.1%)" "IPR002695 (25.1%) IPR016193 (25%) IPR024051 (25%)" "Bifunctional purine biosynthesis protein PurH-like (25.1%) Cytidine deaminase-like (25%) AICAR transformylase, duplicated domain superfamily (25%)" NEGGIQGVKYPIVSDFSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" GLVTPVLRDVDTLGMADIEKK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "2.3.1.61 (99.8%) 2.3.1.- (0.2%)" "dihydrolipoyllysine-residue succinyltransferase (99.8%) Transferring groups other than amino-acyl groups (0.2%)" "GO:0006099 (20.1%) GO:0033512 (19.3%) GO:0006554 (0.5%)" "GO:0005829 (20.1%) GO:0045252 (19.8%) GO:0005737 (0%)" "GO:0004149 (20.1%) GO:0016746 (0.2%) GO:0031405 (0%)" "tricarboxylic acid cycle (20.1%) L-lysine catabolic process to acetyl-CoA via saccharopine (19.3%) lysine catabolic process (0.5%)" "cytosol (20.1%) oxoglutarate dehydrogenase complex (19.8%) cytoplasm (0%)" "dihydrolipoyllysine-residue succinyltransferase activity (20.1%) acyltransferase activity (0.2%) lipoic acid binding (0%)" "IPR001078 (11.3%) IPR023213 (11.3%) IPR050537 (11.3%)" "2-oxoacid dehydrogenase acyltransferase, catalytic domain (11.3%) Chloramphenicol acetyltransferase-like domain superfamily (11.3%) 2-oxoacid dehydrogenase (11.3%)" YAPEEYKAQLAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae TLYDRYQLGEAVDFANIDKAPEERER Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (18.9%) "GO:0003746 (22.6%) GO:0003924 (22.6%) GO:0005525 (22.6%)" cytosol (18.9%) "translation elongation factor activity (22.6%) GTPase activity (22.6%) GTP binding (22.6%)" "IPR000795 (9.5%) IPR027417 (9.5%) IPR031157 (9.5%)" "Translational (tr)-type GTP-binding domain (9.5%) P-loop containing nucleoside triphosphate hydrolase (9.5%) Tr-type G domain, conserved site (9.5%)" YGIDVDAALLKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR045963 (100%) Domain of unknown function DUF6383 (100%) VKPHQVTLVPDDPSQITSNSGWDTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.6.99.2 (100%) pyridoxine 5'-phosphate synthase (100%) GO:0008615 (33.3%) GO:0005829 (33.3%) GO:0033856 (33.3%) pyridoxine biosynthetic process (33.3%) cytosol (33.3%) pyridoxine 5'-phosphate synthase activity (33.3%) "IPR004569 (33.3%) IPR013785 (33.3%) IPR036130 (33.3%)" "Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ (33.3%) Aldolase-type TIM barrel (33.3%) Pyridoxine 5'-phosphate synthase (33.3%)" YDKVEQYEDKDMIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.4%) GO:0043335 (16.4%) GO:0051083 (16.4%)" "GO:0003755 (16.4%) GO:0043022 (16.4%) GO:0044183 (16.4%)" "protein transport (16.4%) protein unfolding (16.4%) 'de novo' cotranslational protein folding (16.4%)" "peptidyl-prolyl cis-trans isomerase activity (16.4%) ribosome binding (16.4%) protein folding chaperone (16.4%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" GGVIMMGKDFPNPWGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15%) GO:0035999 (15%) GO:0032259 (12.2%)" "GO:0005829 (15%) GO:0005737 (0.2%)" "GO:0004372 (15%) GO:0030170 (15%) GO:0008168 (12.2%)" "glycine biosynthetic process from serine (15%) tetrahydrofolate interconversion (15%) methylation (12.2%)" "cytosol (15%) cytoplasm (0.2%)" "glycine hydroxymethyltransferase activity (15%) pyridoxal phosphate binding (15%) methyltransferase activity (12.2%)" "IPR001085 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Serine hydroxymethyltransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" AHHQLDELDEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0043565 (100%) sequence-specific DNA binding (100%) "IPR000485 (14.3%) IPR011008 (14.3%) IPR019887 (14.3%)" "AsnC-type HTH domain (14.3%) Dimeric alpha-beta barrel (14.3%) Transcription regulator AsnC/Lrp, ligand binding domain (14.3%)" GGNQVVFSSINYGTDTSAEGR Bacteria Bacteria "1.17.4.2 (98.5%) 1.1.98.6 (1.5%)" "ribonucleoside-triphosphate reductase (thioredoxin) (98.5%) ribonucleoside-triphosphate reductase (formate) (1.5%)" "GO:0006260 (16.7%) GO:0009265 (16.7%)" GO:0031250 (16.7%) "GO:0008998 (16.7%) GO:0004748 (16.6%) GO:0005524 (16.3%)" "DNA replication (16.7%) 2'-deoxyribonucleotide biosynthetic process (16.7%)" anaerobic ribonucleoside-triphosphate reductase complex (16.7%) "ribonucleoside-triphosphate reductase (thioredoxin) activity (16.7%) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.6%) ATP binding (16.3%)" "IPR012833 (50.5%) IPR005144 (49.5%)" "Ribonucleoside-triphosphate reductase, anaerobic (50.5%) ATP-cone domain (49.5%)" FKSEQYEGFQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (23.8%) GO:0046034 (0.7%)" "GO:0005524 (24.5%) GO:0046961 (24.5%) GO:0046933 (23.8%)" "proton motive force-driven plasma membrane ATP synthesis (23.8%) ATP metabolic process (0.7%)" "ATP binding (24.5%) proton-transporting ATPase activity, rotational mechanism (24.5%) proton-transporting ATP synthase activity, rotational mechanism (23.8%)" "IPR000194 (12.5%) IPR004100 (12.5%) IPR020003 (12.5%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (12.5%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (12.5%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (12.5%)" STAESIVYSALETLAQR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0015935 (19.5%) GO:0005840 (0.7%) GO:1990904 (0.2%)" "GO:0003735 (19.8%) GO:0019843 (19.6%) GO:0000049 (19.5%)" "translation (19.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "small ribosomal subunit (19.5%) ribosome (0.7%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (19.8%) rRNA binding (19.6%) tRNA binding (19.5%)" "IPR023798 (20.1%) IPR036823 (20.1%) IPR000235 (20%)" "Small ribosomal subunit protein uS7 domain (20.1%) Small ribosomal subunit protein uS7 domain superfamily (20.1%) Small ribosomal subunit protein uS7 (20%)" AAAAAPQAQHGQSASAVSSDASVEVKEMDR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0005737 (33.3%) "GO:0016407 (33.3%) GO:0031405 (33.3%)" cytoplasm (33.3%) "acetyltransferase activity (33.3%) lipoic acid binding (33.3%)" "IPR000089 (12.5%) IPR001078 (12.5%) IPR003016 (12.5%)" "Biotin/lipoyl attachment (12.5%) 2-oxoacid dehydrogenase acyltransferase, catalytic domain (12.5%) 2-oxo acid dehydrogenase, lipoyl-binding site (12.5%)" DISGLTHGIGWCAPQQGACK Bacteria Bacteria "GO:0016226 (30%) GO:0006879 (2.5%)" GO:0005737 (2.5%) "GO:0005506 (30%) GO:0051536 (30%) GO:0008198 (2.5%)" "iron-sulfur cluster assembly (30%) intracellular iron ion homeostasis (2.5%)" cytoplasm (2.5%) "iron ion binding (30%) iron-sulfur cluster binding (30%) ferrous iron binding (2.5%)" IPR002871 (100%) NIF system FeS cluster assembly, NifU, N-terminal (100%) KYNGLEPVSATDFLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003439 (25%) IPR003593 (25%) IPR010230 (25%)" "ABC transporter-like, ATP-binding domain (25%) AAA+ ATPase domain (25%) FeS cluster assembly SUF system, ATPase SufC (25%)" TVSFDTKDEER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (20%) "GO:0005524 (20%) GO:0005525 (20%) GO:0016887 (20%)" cytoplasm (20%) "ATP binding (20%) GTP binding (20%) ATP hydrolysis activity (20%)" "IPR004095 (10%) IPR004396 (10%) IPR006073 (10%)" "TGS (10%) Ribosome-binding ATPase YchF/Obg-like ATPase 1 (10%) GTP binding domain (10%)" SVATAQVNGNGQK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.1%) IPR006101 (7.1%) IPR006102 (7.1%)" "Beta galactosidase small chain/ domain 5 (7.1%) Glycoside hydrolase, family 2 (7.1%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.1%)" SMGIAVKGEFPGNN Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (16.7%) IPR006519 (16.7%) IPR020783 (16.7%)" "Ribosomal protein uL11 (16.7%) Large ribosomal subunit protein uL11, bacteria (16.7%) Large ribosomal subunit protein uL11, C-terminal (16.7%)" SLGNSPDPLQLIEQYGADGVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (19.6%) GO:0005829 (19.6%) "GO:0002161 (20.3%) GO:0004832 (20.3%) GO:0005524 (20.3%)" valyl-tRNA aminoacylation (19.6%) cytosol (19.6%) "aminoacyl-tRNA deacylase activity (20.3%) valine-tRNA ligase activity (20.3%) ATP binding (20.3%)" "IPR001412 (9.1%) IPR002300 (9.1%) IPR002303 (9.1%)" "Aminoacyl-tRNA synthetase, class I, conserved site (9.1%) Aminoacyl-tRNA synthetase, class Ia (9.1%) Valine-tRNA ligase (9.1%)" MVAITGSETTER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (20%) IPR011053 (20%) IPR022615 (20%)" "Na(+)-translocating NADH-quinone reductase subunit A (20%) Single hybrid motif (20%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (20%)" IFNDLQHTITGWPGGKPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (30.9%) GO:0006044 (30.9%)" "GO:0004342 (30.9%) GO:0016853 (7.3%)" "carbohydrate metabolic process (30.9%) N-acetylglucosamine metabolic process (30.9%)" "glucosamine-6-phosphate deaminase activity (30.9%) isomerase activity (7.3%)" "IPR003737 (14.4%) IPR004547 (14.4%) IPR006148 (14.4%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.4%) Glucosamine-6-phosphate isomerase (14.4%) Glucosamine/galactosamine-6-phosphate isomerase (14.4%)" FFADPDQPFNQVMANVALR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (32.4%) GO:1902600 (32.4%) GO:0006811 (0.9%)" "GO:0005524 (33%) GO:0016787 (1.4%)" "ATP metabolic process (32.4%) proton transmembrane transport (32.4%) monoatomic ion transport (0.9%)" "ATP binding (33%) hydrolase activity (1.4%)" "IPR022879 (20.2%) IPR027417 (20.2%) IPR000194 (20%)" "V-type ATP synthase regulatory subunit B/beta (20.2%) P-loop containing nucleoside triphosphate hydrolase (20.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20%)" YFKDIEADHLDPQSLLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (12.2%) GO:0005737 (2%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (12.2%) cytoplasm (2%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" IIAEAGEKPAATK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.6.2.1 (100%) DNA topoisomerase (100%) GO:0006265 (25%) "GO:0003677 (25%) GO:0003917 (25%) GO:0046872 (25%)" DNA topological change (25%) "DNA binding (25%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25%) metal ion binding (25%)" "IPR000380 (7.1%) IPR003601 (7.1%) IPR003602 (7.1%)" "DNA topoisomerase, type IA (7.1%) DNA topoisomerase, type IA, domain 2 (7.1%) DNA topoisomerase, type IA, DNA-binding domain (7.1%)" TPDEFALGSLPGAVNIPLDEIRDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.8.1.14 (100%) CoA-disulfide reductase (100%) "GO:0016491 (90.3%) GO:0050451 (9.7%)" "oxidoreductase activity (90.3%) CoA-disulfide reductase (NADPH) activity (9.7%)" "IPR001455 (9.1%) IPR001763 (9.1%) IPR004099 (9.1%)" "TusA-like domain (9.1%) Rhodanese-like domain (9.1%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (9.1%)" CVEGITANAER Bacteria Bacteria 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.2%) IPR008948 (14.2%) IPR018951 (14.2%)" "Fumarate lyase family (14.2%) L-Aspartase-like (14.2%) Fumarase C, C-terminal (14.2%)" VSIHNSCHGVR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0005829 (50.2%) GO:0016491 (49.8%) cytosol (50.2%) oxidoreductase activity (49.8%) IPR004017 (100%) Cysteine-rich domain (100%) AHDLGYSCEFYLDAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (19.6%) GO:0009098 (19.6%) GO:0009099 (19.6%)" "GO:0004084 (20.2%) GO:0052654 (4%) GO:0052655 (4%)" "isoleucine biosynthetic process (19.6%) L-leucine biosynthetic process (19.6%) L-valine biosynthetic process (19.6%)" "branched-chain-amino-acid transaminase activity (20.2%) L-leucine-2-oxoglutarate transaminase activity (4%) L-valine-2-oxoglutarate transaminase activity (4%)" "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" ACEILGVPYEDQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" GQESGRADDNEETIKKR Bacteria Bacteria "2.7.4.3 (95.2%) 2.7.4.- (4.8%)" "adenylate kinase (95.2%) Phosphotransferases with a phosphate group as acceptor (4.8%)" "GO:0044209 (23.9%) GO:0006139 (1%)" GO:0005737 (23.9%) "GO:0005524 (25.4%) GO:0004017 (24.4%) GO:0019205 (1%)" "AMP salvage (23.9%) nucleobase-containing compound metabolic process (1%)" cytoplasm (23.9%) "ATP binding (25.4%) AMP kinase activity (24.4%) nucleobase-containing compound kinase activity (1%)" "IPR000850 (30%) IPR027417 (30%) IPR033690 (30%)" "Adenylate kinase/UMP-CMP kinase (30%) P-loop containing nucleoside triphosphate hydrolase (30%) Adenylate kinase, conserved site (30%)" GFTPLFRPDTPEEYKPTVR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.5.1.18 (100%) glutathione transferase (100%) GO:0042542 (0.4%) GO:0005737 (27.8%) "GO:0016740 (40.5%) GO:0004364 (30.4%) GO:0016853 (0.4%)" response to hydrogen peroxide (0.4%) cytoplasm (27.8%) "transferase activity (40.5%) glutathione transferase activity (30.4%) isomerase activity (0.4%)" "IPR004046 (18.2%) IPR010987 (18.2%) IPR036282 (18.2%)" "Glutathione S-transferase, C-terminal (18.2%) Glutathione S-transferase, C-terminal-like (18.2%) Glutathione S-transferase, C-terminal domain superfamily (18.2%)" AGVSNLLDILSAVTGQSIPELEK root "6.1.1.2 (99.8%) 3.1.3.18 (0.2%)" "tryptophan--tRNA ligase (99.8%) phosphoglycolate phosphatase (0.2%)" "GO:0006436 (24.9%) GO:0005975 (0.1%) GO:0046295 (0.1%)" "GO:0005829 (24.9%) GO:0005739 (0.1%)" "GO:0004830 (24.9%) GO:0005524 (24.8%) GO:0016874 (0.3%)" "tryptophanyl-tRNA aminoacylation (24.9%) carbohydrate metabolic process (0.1%) glycolate biosynthetic process (0.1%)" "cytosol (24.9%) mitochondrion (0.1%)" "tryptophan-tRNA ligase activity (24.9%) ATP binding (24.8%) ligase activity (0.3%)" "IPR050203 (16.9%) IPR014729 (16.9%) IPR002305 (16.9%)" "Tryptophan--tRNA ligase (16.9%) Rossmann-like alpha/beta/alpha sandwich fold (16.9%) Aminoacyl-tRNA synthetase, class Ic (16.9%)" AHQMKPEEREYMTALR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" GITINIAHIEYQTAER Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (19.2%) "GO:0000287 (19.2%) GO:0003746 (19.2%) GO:0003924 (19.2%)" cytosol (19.2%) "magnesium ion binding (19.2%) translation elongation factor activity (19.2%) GTPase activity (19.2%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" GLVCTELKNNEEVIASLYER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" IAKDYIEKGQLVPDELIVDMLANVLDSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.4.3 (100%) adenylate kinase (100%) GO:0044209 (25%) GO:0005737 (25%) "GO:0004017 (25%) GO:0005524 (25%)" AMP salvage (25%) cytoplasm (25%) "AMP kinase activity (25%) ATP binding (25%)" "IPR000850 (33.3%) IPR027417 (33.3%) IPR033690 (33.3%)" "Adenylate kinase/UMP-CMP kinase (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%) Adenylate kinase, conserved site (33.3%)" TASTYNQIPLNR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (33.3%) GO:0006044 (33.3%)" GO:0004342 (33.3%) "carbohydrate metabolic process (33.3%) N-acetylglucosamine metabolic process (33.3%)" glucosamine-6-phosphate deaminase activity (33.3%) "IPR003737 (14.5%) IPR004547 (14.5%) IPR006148 (14.5%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.5%) Glucosamine-6-phosphate isomerase (14.5%) Glucosamine/galactosamine-6-phosphate isomerase (14.5%)" SEMIYGIHAVQALLER Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.1.1.185 (100%) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (100%) "GO:0032259 (0.7%) GO:0006364 (0.1%)" GO:0005829 (32.9%) "GO:0070039 (33%) GO:0003723 (32.6%) GO:0008168 (0.7%)" "methylation (0.7%) rRNA processing (0.1%)" cytosol (32.9%) "rRNA (guanosine-2'-O-)-methyltransferase activity (33%) RNA binding (32.6%) methyltransferase activity (0.7%)" "IPR013123 (14.5%) IPR029064 (14.5%) IPR004441 (14.4%)" "RNA 2-O ribose methyltransferase, substrate binding (14.5%) Ribosomal protein eL30-like superfamily (14.5%) RNA methyltransferase TrmH (14.4%)" TYHPWNWR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (92.9%) GO:0050112 (7.1%)" "nucleotide binding (92.9%) inositol 2-dehydrogenase (NAD+) activity (7.1%)" "IPR000683 (16.9%) IPR006311 (16.9%) IPR036291 (16.9%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.9%) Twin-arginine translocation pathway, signal sequence (16.9%) NAD(P)-binding domain superfamily (16.9%)" AQLQEIAQTK root "GO:0006412 (24.7%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (24.6%) GO:0005840 (0.7%) GO:0005829 (0.1%)" "GO:0003735 (24.7%) GO:0070180 (24.6%) GO:0019843 (0.1%)" "translation (24.7%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.6%) ribosome (0.7%) cytosol (0.1%)" "structural constituent of ribosome (24.7%) large ribosomal subunit rRNA binding (24.6%) rRNA binding (0.1%)" "IPR020783 (14.3%) IPR036769 (14.3%) IPR000911 (14.3%)" "Large ribosomal subunit protein uL11, C-terminal (14.3%) Large ribosomal subunit protein uL11, C-terminal domain superfamily (14.3%) Ribosomal protein uL11 (14.3%)" GDLGIEVPAEKIPGIQR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (10.3%) "GO:0000287 (17.9%) GO:0004743 (17.9%) GO:0005524 (17.9%)" response to stress (10.3%) "magnesium ion binding (17.9%) pyruvate kinase activity (17.9%) ATP binding (17.9%)" "IPR001697 (11.4%) IPR015793 (11.4%) IPR015813 (11.4%)" "Pyruvate kinase (11.4%) Pyruvate kinase, barrel (11.4%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (11.4%)" VKNEYPQYDVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0046872 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) metal ion binding (9.1%)" "IPR000023 (16.8%) IPR015912 (16.8%) IPR022953 (16.8%)" "Phosphofructokinase domain (16.8%) Phosphofructokinase, conserved site (16.8%) ATP-dependent 6-phosphofructokinase (16.8%)" KGGQVVGGAVESNTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.-.-.- (100%) Translocases (100%) GO:0022900 (25%) GO:0005886 (25%) "GO:0009055 (25%) GO:0010181 (25%)" electron transport chain (25%) plasma membrane (25%) "electron transfer activity (25%) FMN binding (25%)" "IPR007329 (50%) IPR010209 (50%)" "FMN-binding (50%) Ion-translocating oxidoreductase complex, subunit RnfG/RsxG (50%)" TLASHALCIFGDHQDVMSCR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (71.4%) 1.2.1.51 (14.3%) 1.2.7.- (14.3%)" "pyruvate synthase (71.4%) pyruvate dehydrogenase (NADP(+)) (14.3%) With an iron-sulfur protein as acceptor (14.3%)" "GO:0006979 (14.8%) GO:0022900 (14.5%) GO:0044281 (11.5%)" "GO:0005506 (14.5%) GO:0051539 (14.5%) GO:0030976 (14.2%)" "response to oxidative stress (14.8%) electron transport chain (14.5%) small molecule metabolic process (11.5%)" "iron ion binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%) thiamine pyrophosphate binding (14.2%)" "IPR002880 (7.9%) IPR029061 (7.9%) IPR050722 (7.9%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.9%) Thiamin diphosphate-binding fold (7.9%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.9%)" VLVEDPLFLACLMIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0008959 (55.6%) GO:0016407 (44.4%)" "phosphate acetyltransferase activity (55.6%) acetyltransferase activity (44.4%)" "IPR002505 (16.7%) IPR004614 (16.7%) IPR012147 (16.7%)" "Phosphate acetyl/butaryl transferase (16.7%) Phosphate acetyltransferase (16.7%) Phosphate acetyl/butyryltransferase (16.7%)" ILVMEAGDMNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.3.4 (100%) 3-dehydroquinate synthase (100%) "GO:0008652 (14.3%) GO:0009073 (14.3%) GO:0009423 (14.3%)" GO:0005737 (14.3%) "GO:0000166 (14.3%) GO:0003856 (14.3%) GO:0046872 (14.3%)" "amino acid biosynthetic process (14.3%) aromatic amino acid family biosynthetic process (14.3%) chorismate biosynthetic process (14.3%)" cytoplasm (14.3%) "nucleotide binding (14.3%) 3-dehydroquinate synthase activity (14.3%) metal ion binding (14.3%)" "IPR016037 (20%) IPR030960 (20%) IPR030963 (20%)" "3-dehydroquinate synthase AroB (20%) 3-dehydroquinate synthase, N-terminal domain (20%) 3-dehydroquinate synthase family (20%)" ADLNVPVKDGK root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.6%) GO:0006094 (16.6%) GO:0008615 (0%)" "GO:0005829 (16.6%) GO:0005737 (0%)" "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "glycolytic process (16.6%) gluconeogenesis (16.6%) pyridoxine biosynthetic process (0%)" "cytosol (16.6%) cytoplasm (0%)" "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (25.4%) IPR015824 (25.4%) IPR036043 (25.4%)" "Phosphoglycerate kinase (25.4%) Phosphoglycerate kinase, N-terminal (25.4%) Phosphoglycerate kinase superfamily (25.4%)" NQADVECEDGKTIASGTQYLGIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" MKTLNYTHLEEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0008199 (43.3%) GO:0016722 (43.3%) GO:0003677 (13.3%)" "ferric iron binding (43.3%) oxidoreductase activity, acting on metal ions (43.3%) DNA binding (13.3%)" "IPR002177 (20%) IPR008331 (20%) IPR009078 (20%)" "DNA-binding protein Dps (20%) Ferritin/DPS domain (20%) Ferritin-like superfamily (20%)" FVDNTAGILVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004822 (14.3%)" isoleucyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) isoleucine-tRNA ligase activity (14.3%)" "IPR002300 (12.5%) IPR002301 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class Ia (12.5%) Isoleucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" RQAITNPQR Bacteria Bacteria GO:0005737 (1.4%) "GO:0005524 (33.3%) GO:0140662 (33.3%) GO:0051082 (31.9%)" cytoplasm (1.4%) "ATP binding (33.3%) ATP-dependent protein folding chaperone (33.3%) unfolded protein binding (31.9%)" "IPR013126 (17.1%) IPR018181 (17.1%) IPR043129 (17.1%)" "Heat shock protein 70 family (17.1%) Heat shock protein 70, conserved site (17.1%) ATPase, nucleotide binding domain (17.1%)" VFQTHSPVVDSISVK root "GO:0006412 (31.8%) GO:0000027 (0.3%) GO:0002181 (0.3%)" "GO:0022625 (32.1%) GO:0005840 (2.3%) GO:0005737 (0.3%)" "GO:0003735 (32.3%) GO:0070180 (0.3%)" "translation (31.8%) ribosomal large subunit assembly (0.3%) cytoplasmic translation (0.3%)" "cytosolic large ribosomal subunit (32.1%) ribosome (2.3%) cytoplasm (0.3%)" "structural constituent of ribosome (32.3%) large ribosomal subunit rRNA binding (0.3%)" "IPR001857 (25.2%) IPR008991 (25.2%) IPR038657 (25.2%)" "Large ribosomal subunit protein bL19 (25.2%) Translation protein SH3-like domain superfamily (25.2%) Large ribosomal subunit protein bL19 superfamily (25.2%)" TKPHVNVGTIGHVDHGK root "3.6.5.3 (99.9%) 1.97.1.4 (0.1%)" "protein-synthesizing GTPase (99.9%) [formate-C-acetyltransferase]-activating enzyme (0.1%)" "GO:0070125 (1.7%) GO:0006414 (0%) GO:0006397 (0%)" "GO:0005829 (14%) GO:0032045 (7.7%) GO:0005739 (1.8%)" "GO:0003746 (18.6%) GO:0003924 (18.4%) GO:0005525 (18.4%)" "mitochondrial translational elongation (1.7%) translational elongation (0%) mRNA processing (0%)" "cytosol (14%) guanyl-nucleotide exchange factor complex (7.7%) mitochondrion (1.8%)" "translation elongation factor activity (18.6%) GTPase activity (18.4%) GTP binding (18.4%)" "IPR027417 (11.1%) IPR000795 (11.1%) IPR050055 (10.8%)" "P-loop containing nucleoside triphosphate hydrolase (11.1%) Translational (tr)-type GTP-binding domain (11.1%) Elongation factor Tu GTPase (10.8%)" EFKVECNQGRPQVTYK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0032790 (20.1%) GO:0005737 (19.4%) "GO:0003746 (20.1%) GO:0003924 (20.1%) GO:0005525 (20.1%)" ribosome disassembly (20.1%) cytoplasm (19.4%) "translation elongation factor activity (20.1%) GTPase activity (20.1%) GTP binding (20.1%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" MQLNSTEISELIK root "7.1.2.2 (95.9%) 3.6.3.14 (4%) 3.6.3.- (0.1%)" "H(+)-transporting two-sector ATPase (95.9%) Transferred entry: 7.1.2.2 (4%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (0.1%)" "GO:0006754 (0.1%) GO:1902600 (0.1%) GO:0015986 (0.1%)" "GO:0045259 (18.8%) GO:0005886 (18.5%) GO:0005739 (0%)" "GO:0005524 (18.9%) GO:0046933 (18.8%) GO:0043531 (18.8%)" "ATP biosynthetic process (0.1%) proton transmembrane transport (0.1%) proton motive force-driven ATP synthesis (0.1%)" "proton-transporting ATP synthase complex (18.8%) plasma membrane (18.5%) mitochondrion (0%)" "ATP binding (18.9%) proton-transporting ATP synthase activity, rotational mechanism (18.8%) ADP binding (18.8%)" "IPR023366 (10.1%) IPR036121 (10.1%) IPR004100 (10.1%)" "ATP synthase subunit alpha, N-terminal domain-like superfamily (10.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily (10.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.1%)" ITLETSDVDGNEEFDEEVLHMR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.1%) "GO:0000428 (17.1%) GO:0005737 (15.4%)" "GO:0003677 (17.1%) GO:0003899 (17.1%) GO:0046983 (16.3%)" DNA-templated transcription (17.1%) "DNA-directed RNA polymerase complex (17.1%) cytoplasm (15.4%)" "DNA binding (17.1%) DNA-directed RNA polymerase activity (17.1%) protein dimerization activity (16.3%)" "IPR011260 (17.8%) IPR011263 (16.9%) IPR036603 (16.9%)" "RNA polymerase, alpha subunit, C-terminal (17.8%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.9%) RNA polymerase, RBP11-like subunit (16.9%)" TVPTLDNWQLDLQGISDKLDGVK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.6.1.9 (100%) histidinol-phosphate transaminase (100%) GO:0000105 (32.5%) GO:0005829 (0.3%) "GO:0030170 (33%) GO:0004400 (32.7%) GO:0008483 (1.3%)" L-histidine biosynthetic process (32.5%) cytosol (0.3%) "pyridoxal phosphate binding (33%) histidinol-phosphate transaminase activity (32.7%) transaminase activity (1.3%)" "IPR004839 (16.8%) IPR015421 (16.8%) IPR015424 (16.8%)" "Aminotransferase, class I/classII, large domain (16.8%) Pyridoxal phosphate-dependent transferase, major domain (16.8%) Pyridoxal phosphate-dependent transferase (16.8%)" TDEEGYALLR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (17.3%) "GO:0005840 (17.3%) GO:1990904 (17.3%)" "GO:0003735 (17.3%) GO:0000049 (15.4%) GO:0019843 (15.4%)" translation (17.3%) "ribosome (17.3%) ribonucleoprotein complex (17.3%)" "structural constituent of ribosome (17.3%) tRNA binding (15.4%) rRNA binding (15.4%)" "IPR002132 (20%) IPR020930 (20%) IPR022803 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5, bacteria (20%) Large ribosomal subunit protein uL5 domain superfamily (20%)" GGGYGSNRGGGYGSNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003723 (100%) RNA binding (100%) "IPR000504 (20%) IPR012677 (20%) IPR035979 (20%)" "RNA recognition motif domain (20%) Nucleotide-binding alpha-beta plait domain superfamily (20%) RNA-binding domain superfamily (20%)" YHTETEMMR Pseudomonadati Bacteria Pseudomonadati 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.6%) "GO:0005829 (16.6%) GO:0005960 (16.6%)" "GO:0004375 (16.6%) GO:0016594 (16.6%) GO:0030170 (16.6%)" glycine decarboxylation via glycine cleavage system (16.6%) "cytosol (16.6%) glycine cleavage complex (16.6%)" "glycine dehydrogenase (decarboxylating) activity (16.6%) glycine binding (16.6%) pyridoxal phosphate binding (16.6%)" "IPR015421 (14.4%) IPR015424 (14.4%) IPR020581 (14.4%)" "Pyridoxal phosphate-dependent transferase, major domain (14.4%) Pyridoxal phosphate-dependent transferase (14.4%) Glycine cleavage system P protein (14.4%)" ILDQGEAGDNVGLLLR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0006414 (0.1%) "GO:0005829 (15.6%) GO:0032045 (5.2%) GO:0005737 (2.3%)" "GO:0003746 (18.4%) GO:0005525 (18.3%) GO:0003924 (18%)" translational elongation (0.1%) "cytosol (15.6%) guanyl-nucleotide exchange factor complex (5.2%) cytoplasm (2.3%)" "translation elongation factor activity (18.4%) GTP binding (18.3%) GTPase activity (18%)" "IPR004161 (8.5%) IPR009000 (8.5%) IPR050055 (8.5%)" "Translation elongation factor EFTu-like, domain 2 (8.5%) Translation protein, beta-barrel domain superfamily (8.5%) Elongation factor Tu GTPase (8.5%)" AVAAVNGPIAEALIGKDAK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" ERTGAGMMDCKK root GO:0006414 (0.1%) "GO:0005737 (49.4%) GO:0005739 (0%) GO:0005829 (0%)" "GO:0003746 (50.2%) GO:0005085 (0%) GO:0008270 (0%)" translational elongation (0.1%) "cytoplasm (49.4%) mitochondrion (0%) cytosol (0%)" "translation elongation factor activity (50.2%) guanyl-nucleotide exchange factor activity (0%) zinc ion binding (0%)" "IPR001816 (20.1%) IPR018101 (20.1%) IPR009060 (20.1%)" "Translation elongation factor EFTs/EF1B (20.1%) Translation elongation factor Ts, conserved site (20.1%) UBA-like superfamily (20.1%)" AKLTVVPTPVGNLEDMTFR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.1.1.198 (100%) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase (100%) GO:0005737 (50%) GO:0070677 (50%) cytoplasm (50%) rRNA (cytosine-2'-O-)-methyltransferase activity (50%) "IPR000878 (16.7%) IPR008189 (16.7%) IPR014776 (16.7%)" "Tetrapyrrole methylase (16.7%) rRNA small subunit methyltransferase I (16.7%) Tetrapyrrole methylase, subdomain 2 (16.7%)" VKITNDIELKDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (16.8%) GO:0042254 (16.2%)" "GO:0015935 (16.8%) GO:0005737 (16.2%) GO:0005840 (0.4%)" "GO:0003735 (16.8%) GO:0019843 (16.8%)" "translation (16.8%) ribosome biogenesis (16.2%)" "small ribosomal subunit (16.8%) cytoplasm (16.2%) ribosome (0.4%)" "structural constituent of ribosome (16.8%) rRNA binding (16.8%)" "IPR000851 (14.3%) IPR005324 (14.3%) IPR005712 (14.3%)" "Small ribosomal subunit protein uS5 (14.3%) Small ribosomal subunit protein uS5, C-terminal (14.3%) Small ribosomal subunit protein uS5, bacteria (14.3%)" SDAATTIIPLDKVNTNVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae TAIVEGLAHR root "GO:0034605 (18.8%) GO:0042026 (16.1%) GO:0006508 (3.4%)" "GO:0005737 (18.8%) GO:0016020 (0.2%) GO:0005576 (0%)" "GO:0005524 (18.9%) GO:0016887 (18.9%) GO:0008233 (3.4%)" "cellular response to heat (18.8%) protein refolding (16.1%) proteolysis (3.4%)" "cytoplasm (18.8%) membrane (0.2%) extracellular region (0%)" "ATP binding (18.9%) ATP hydrolysis activity (18.9%) peptidase activity (3.4%)" "IPR027417 (8.5%) IPR050130 (8.5%) IPR003959 (8.5%)" "P-loop containing nucleoside triphosphate hydrolase (8.5%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.5%) ATPase, AAA-type, core (8.5%)" AEVSDQDKVDYYTIEVTDEMVENQIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.3%) GO:0043335 (16.3%) GO:0051083 (16.3%)" "GO:0003755 (16.3%) GO:0043022 (16.3%) GO:0044183 (16.3%)" "protein transport (16.3%) protein unfolding (16.3%) 'de novo' cotranslational protein folding (16.3%)" "peptidyl-prolyl cis-trans isomerase activity (16.3%) ribosome binding (16.3%) protein folding chaperone (16.3%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" MSADLLIVPFIDK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0000303 (2.1%) GO:0006950 (2.1%) GO:0009411 (2.1%)" "GO:0005737 (87.2%) GO:0005829 (2.1%)" GO:0042803 (2.1%) "response to superoxide (2.1%) response to stress (2.1%) response to UV (2.1%)" "cytoplasm (87.2%) cytosol (2.1%)" protein homodimerization activity (2.1%) "IPR006015 (33.3%) IPR006016 (33.3%) IPR014729 (33.3%)" "Universal stress protein A family (33.3%) UspA (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (33.3%)" ALINFFLDEARK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (24.9%) "GO:0005737 (24.7%) GO:0005829 (0.2%)" "GO:0004828 (24.9%) GO:0005524 (24.9%) GO:0016874 (0.4%)" seryl-tRNA aminoacylation (24.9%) "cytoplasm (24.7%) cytosol (0.2%)" "serine-tRNA ligase activity (24.9%) ATP binding (24.9%) ligase activity (0.4%)" "IPR002314 (13.8%) IPR002317 (13.8%) IPR045864 (13.8%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (13.8%) Serine-tRNA ligase, type1 (13.8%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (13.8%)" TTPSIVAFVEGGERK root "GO:0005737 (10.3%) GO:0070013 (1.3%)" "GO:0005524 (29.7%) GO:0140662 (29.7%) GO:0051082 (29%)" "cytoplasm (10.3%) intracellular organelle lumen (1.3%)" "ATP binding (29.7%) ATP-dependent protein folding chaperone (29.7%) unfolded protein binding (29%)" "IPR013126 (16.9%) IPR018181 (16.9%) IPR043129 (16.9%)" "Heat shock protein 70 family (16.9%) Heat shock protein 70, conserved site (16.9%) ATPase, nucleotide binding domain (16.9%)" ANMEGKDVSTIASELQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" STGMYGGTCINIGCIPTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.16.1.1 (100%) mercury(II) reductase (100%) "GO:0003955 (30.8%) GO:0016668 (30.8%) GO:0050660 (30.8%)" "NAD(P)H dehydrogenase (quinone) activity (30.8%) oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (30.8%) flavin adenine dinucleotide binding (30.8%)" "IPR001100 (16.7%) IPR004099 (16.7%) IPR012999 (16.7%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (16.7%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (16.7%) Pyridine nucleotide-disulphide oxidoreductase, class I, active site (16.7%)" DNGFNVIVGQRPGK Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.1.1.86 (90.7%) 1.1.1.- (8.2%) 1.1.1.382 (1%)" "ketol-acid reductoisomerase (NADP(+)) (90.7%) With NAD(+) or NADP(+) as acceptor (8.2%) ketol-acid reductoisomerase (NAD(+)) (1%)" "GO:0009097 (20.7%) GO:0009099 (20.7%)" GO:0070013 (0.5%) "GO:0004455 (20.7%) GO:0046872 (20.7%) GO:0016853 (16.4%)" "isoleucine biosynthetic process (20.7%) L-valine biosynthetic process (20.7%)" intracellular organelle lumen (0.5%) "ketol-acid reductoisomerase activity (20.7%) metal ion binding (20.7%) isomerase activity (16.4%)" "IPR000506 (16.7%) IPR008927 (16.7%) IPR013023 (16.7%)" "Ketol-acid reductoisomerase, C-terminal (16.7%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.7%) Ketol-acid reductoisomerase (16.7%)" FNIGEKLEDVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043043 (33%) "GO:0005829 (32%) GO:0005737 (1.4%)" GO:0003746 (33.6%) peptide biosynthetic process (33%) "cytosol (32%) cytoplasm (1.4%)" translation elongation factor activity (33.6%) "IPR020599 (11.2%) IPR001059 (11.1%) IPR008991 (11.1%)" "Translation elongation factor P/YeiP (11.2%) Translation elongation factor P/YeiP, central (11.1%) Translation protein SH3-like domain superfamily (11.1%)" AVEGAATQSVADQEAIQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" EVQIHEEYEKNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IEIIENLLNKVDNLIITGGMTYTFTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" TLAIVTSQGGPTSHTAILAR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 2.7.3.9 (100%) phosphoenolpyruvate--protein phosphotransferase (100%) GO:0009401 (19.8%) GO:0005737 (19.8%) "GO:0016301 (20.1%) GO:0046872 (20.1%) GO:0008965 (19.8%)" phosphoenolpyruvate-dependent sugar phosphotransferase system (19.8%) cytoplasm (19.8%) "kinase activity (20.1%) metal ion binding (20.1%) phosphoenolpyruvate-protein phosphotransferase activity (19.8%)" "IPR000121 (8.4%) IPR008279 (8.4%) IPR015813 (8.4%)" "PEP-utilising enzyme, C-terminal (8.4%) PEP-utilising enzyme, mobile domain (8.4%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (8.4%)" MEHTSGDVFSNASDLSTTLR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.3.1.1 (100%) dihydrouracil dehydrogenase (NAD(+)) (100%) "GO:0006210 (13.9%) GO:0006212 (13.9%) GO:0044205 (11.9%)" GO:0005737 (13.9%) "GO:0002058 (13.9%) GO:0050661 (13.9%) GO:0004152 (12.9%)" "thymine catabolic process (13.9%) uracil catabolic process (13.9%) 'de novo' UMP biosynthetic process (11.9%)" cytoplasm (13.9%) "uracil binding (13.9%) NADP binding (13.9%) dihydroorotate dehydrogenase activity (12.9%)" "IPR005720 (33.3%) IPR012135 (33.3%) IPR013785 (33.3%)" "Dihydroorotate dehydrogenase, catalytic (33.3%) Dihydroorotate dehydrogenase, class 1/ 2 (33.3%) Aldolase-type TIM barrel (33.3%)" FFDNDINKVPK root 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.2%) GO:0006043 (14.2%) GO:0006046 (14.2%)" "GO:0005829 (12.2%) GO:0005737 (2%)" "GO:0004342 (14.2%) GO:0042802 (14.2%) GO:0016853 (0.8%)" "carbohydrate metabolic process (14.2%) glucosamine catabolic process (14.2%) N-acetylglucosamine catabolic process (14.2%)" "cytosol (12.2%) cytoplasm (2%)" "glucosamine-6-phosphate deaminase activity (14.2%) identical protein binding (14.2%) isomerase activity (0.8%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" GLMAKPDGSIIETPITANFR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (15.2%) GO:0005975 (0%) GO:0006352 (0%)" "GO:0000428 (15.3%) GO:0005829 (9.1%) GO:0031981 (0%)" "GO:0003677 (15.2%) GO:0003899 (15.2%) GO:0000287 (14.6%)" "DNA-templated transcription (15.2%) carbohydrate metabolic process (0%) DNA-templated transcription initiation (0%)" "DNA-directed RNA polymerase complex (15.3%) cytosol (9.1%) nuclear lumen (0%)" "DNA binding (15.2%) DNA-directed RNA polymerase activity (15.2%) magnesium ion binding (14.6%)" "IPR007083 (9.2%) IPR045867 (9.2%) IPR007081 (9.2%)" "RNA polymerase Rpb1, domain 4 (9.2%) DNA-directed RNA polymerase, subunit beta-prime (9.2%) RNA polymerase Rpb1, domain 5 (9.2%)" SGGSSTNATSGCCANCPHNH LVDIAEADKDHASR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.3%) GO:0006879 (14.3%)" GO:0005829 (14.3%) "GO:0004322 (14.3%) GO:0008198 (14.3%) GO:0008199 (14.3%)" "iron ion transport (14.3%) intracellular iron ion homeostasis (14.3%)" cytosol (14.3%) "ferroxidase activity (14.3%) ferrous iron binding (14.3%) ferric iron binding (14.3%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" AIAAHLAEEGAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.-.-.- (40%) 1.1.1.131 (40%) 1.1.1.57 (20%)" "Oxidoreductases (40%) mannuronate reductase (40%) fructuronate reductase (20%)" GO:0005975 (47.9%) "GO:0016616 (45.2%) GO:0050090 (2.7%) GO:0051213 (2.7%)" carbohydrate metabolic process (47.9%) "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (45.2%) mannuronate reductase activity (2.7%) dioxygenase activity (2.7%)" "IPR002347 (25%) IPR020904 (25%) IPR036291 (25%)" "Short-chain dehydrogenase/reductase SDR (25%) Short-chain dehydrogenase/reductase, conserved site (25%) NAD(P)-binding domain superfamily (25%)" LGNFLFDTQKQTLAIGDKVTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" GGPSTGLPTKSEQTDLMQALYGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.9%) IPR002880 (12.9%) IPR009014 (12.9%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.9%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.9%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.9%)" MVEEAQGSKAPVQR Bacteria Bacteria "3.6.3.4 (50%) 7.2.2.8 (50%)" "Transferred entry: 7.2.2.9 (50%) P-type Cu(+) transporter (50%)" "GO:0055070 (15%) GO:0060003 (5%)" "GO:0005886 (15%) GO:0012505 (5%)" "GO:0005507 (15%) GO:0005524 (15%) GO:0016887 (15%)" "copper ion homeostasis (15%) copper ion export (5%)" "plasma membrane (15%) endomembrane system (5%)" "copper ion binding (15%) ATP binding (15%) ATP hydrolysis activity (15%)" "IPR001757 (9.1%) IPR006121 (9.1%) IPR008250 (9.1%)" "P-type ATPase (9.1%) Heavy metal-associated domain, HMA (9.1%) P-type ATPase, A domain superfamily (9.1%)" VSSALTSGLTADCTSLEIGDHEDKKEGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) GO:0033539 (32.8%) "GO:0009055 (32.8%) GO:0050660 (32.8%) GO:0003677 (0.5%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (32.8%) "electron transfer activity (32.8%) flavin adenine dinucleotide binding (32.8%) DNA binding (0.5%)" "IPR001308 (16.7%) IPR014729 (16.7%) IPR014730 (16.7%)" "Electron transfer flavoprotein alpha subunit/FixB (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.7%)" AQVQALLDNEDPTELIECFYKDLEFGTGGLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (23.8%) GO:0006166 (23.8%)" "GO:0000287 (23.8%) GO:0008973 (23.8%) GO:0004614 (4.8%)" "carbohydrate metabolic process (23.8%) purine ribonucleoside salvage (23.8%)" "magnesium ion binding (23.8%) phosphopentomutase activity (23.8%) phosphoglucomutase activity (4.8%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" KVQPHEIFVAGDLADPHGTHR FTQAGSEVSALLGR root "7.1.2.2 (99.2%) 3.6.3.14 (0.8%) 7.2.2.1 (0%)" "H(+)-transporting two-sector ATPase (99.2%) Transferred entry: 7.1.2.2 (0.8%) Na(+)-transporting two-sector ATPase (0%)" "GO:0042776 (8.4%) GO:0001525 (0.2%) GO:0043536 (0.2%)" "GO:0045259 (20.7%) GO:0005886 (11.7%) GO:0005743 (4.6%)" "GO:0005524 (20.7%) GO:0046933 (20.7%) GO:0016787 (2.9%)" "proton motive force-driven mitochondrial ATP synthesis (8.4%) angiogenesis (0.2%) positive regulation of blood vessel endothelial cell migration (0.2%)" "proton-transporting ATP synthase complex (20.7%) plasma membrane (11.7%) mitochondrial inner membrane (4.6%)" "ATP binding (20.7%) proton-transporting ATP synthase activity, rotational mechanism (20.7%) hydrolase activity (2.9%)" "IPR000194 (10.3%) IPR027417 (10.2%) IPR050053 (10.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.3%) P-loop containing nucleoside triphosphate hydrolase (10.2%) ATPase alpha/beta chains (10.2%)" RLFVVDTFCGANEGTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.5%) GO:0005829 (17.5%) "GO:0004612 (17.5%) GO:0005524 (17.5%) GO:0046872 (17.5%)" gluconeogenesis (17.5%) cytosol (17.5%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.5%) ATP binding (17.5%) metal ion binding (17.5%)" "IPR001272 (25.7%) IPR008210 (25.7%) IPR013035 (24.3%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.7%) Phosphoenolpyruvate carboxykinase, N-terminal (25.7%) Phosphoenolpyruvate carboxykinase, C-terminal (24.3%)" ALGYAVTEVKGDDLKAANTISPVAALQGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR008969 (14.3%) IPR012910 (14.3%) IPR023996 (14.3%)" "Carboxypeptidase-like, regulatory domain superfamily (14.3%) TonB-dependent receptor, plug domain (14.3%) TonB-dependent outer membrane protein, SusC/RagA (14.3%)" VLGDLTMNHIIPMATK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (50%) GO:0004356 (50%) glutamine biosynthetic process (50%) glutamine synthetase activity (50%) "IPR008146 (14.4%) IPR008147 (14.4%) IPR022147 (14.4%)" "Glutamine synthetase, catalytic domain (14.4%) Glutamine synthetase, N-terminal domain (14.4%) Glutamine synthetase type III N-terminal (14.4%)" LNDKFGIVK root "1.2.1.- (93.8%) 1.2.1.12 (4.1%) 1.2.1.13 (2.1%)" "With NAD(+) or NADP(+) as acceptor (93.8%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (4.1%) glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) (2.1%)" "GO:0006006 (21.6%) GO:0006096 (5.9%) GO:0006355 (0.2%)" "GO:0005737 (6%) GO:0005829 (0.2%) GO:0005886 (0.2%)" "GO:0051287 (21.7%) GO:0050661 (21.6%) GO:0016620 (17.5%)" "glucose metabolic process (21.6%) glycolytic process (5.9%) regulation of DNA-templated transcription (0.2%)" "cytoplasm (6%) cytosol (0.2%) plasma membrane (0.2%)" "NAD binding (21.7%) NADP binding (21.6%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (17.5%)" "IPR020829 (16.8%) IPR020831 (16.8%) IPR020828 (16.3%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.8%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (16.8%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.3%)" AVGESVQKPLEYYDNNVNGTLR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) "GO:0006012 (32.2%) GO:0005996 (0.5%) GO:0005975 (0.3%)" "GO:0005829 (32.4%) GO:0005737 (0.3%)" "GO:0003978 (32.4%) GO:0016853 (0.5%) GO:0016857 (0.3%)" "galactose metabolic process (32.2%) monosaccharide metabolic process (0.5%) carbohydrate metabolic process (0.3%)" "cytosol (32.4%) cytoplasm (0.3%)" "UDP-glucose 4-epimerase activity (32.4%) isomerase activity (0.5%) racemase and epimerase activity, acting on carbohydrates and derivatives (0.3%)" "IPR036291 (34.1%) IPR001509 (33.2%) IPR005886 (31.9%)" "NAD(P)-binding domain superfamily (34.1%) NAD-dependent epimerase/dehydratase (33.2%) UDP-glucose 4-epimerase (31.9%)" VQGSSTLLLQDCAPNAQHVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (92.3%) GO:0050112 (7.7%)" "nucleotide binding (92.3%) inositol 2-dehydrogenase (NAD+) activity (7.7%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" ISAFVPMVSHLDHSEHSVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" TVTHMQDEAANFPDPVDR root "GO:0010468 (32.8%) GO:0006355 (0.1%) GO:0006302 (0.1%)" "GO:0005737 (33.2%) GO:0005829 (0.1%)" "GO:0008270 (33.2%) GO:0003677 (0.5%) GO:0097216 (0.1%)" "regulation of gene expression (32.8%) regulation of DNA-templated transcription (0.1%) double-strand break repair (0.1%)" "cytoplasm (33.2%) cytosol (0.1%)" "zinc ion binding (33.2%) DNA binding (0.5%) guanosine tetraphosphate binding (0.1%)" "IPR037187 (17.1%) IPR048489 (17.1%) IPR012784 (16.9%)" "DksA, N-terminal domain superfamily (17.1%) DnaK suppressor protein DksA, N-terminal domain (17.1%) RNA polymerase-binding transcription factor DksA (16.9%)" TPEHINVKPVYTKEDLEGMEHLNYVAGIPPYLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20.2%) GO:0005737 (20.2%) "GO:0004494 (20.2%) GO:0031419 (20.2%) GO:0046872 (19.2%)" propionate metabolic process, methylmalonyl pathway (20.2%) cytoplasm (20.2%) "methylmalonyl-CoA mutase activity (20.2%) cobalamin binding (20.2%) metal ion binding (19.2%)" "IPR006099 (17.2%) IPR016176 (17.2%) IPR006098 (16.4%)" "Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (17.2%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (17.2%) Methylmalonyl-CoA mutase, alpha chain, catalytic (16.4%)" NQFQYSSTMQIPVLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (17%) "GO:0005840 (17%) GO:1990904 (17%)" "GO:0003735 (17%) GO:0000049 (15.9%) GO:0019843 (15.9%)" translation (17%) "ribosome (17%) ribonucleoprotein complex (17%)" "structural constituent of ribosome (17%) tRNA binding (15.9%) rRNA binding (15.9%)" "IPR002132 (20%) IPR020930 (20%) IPR022803 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5, bacteria (20%) Large ribosomal subunit protein uL5 domain superfamily (20%)" AKVPLAETFGYVTALR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.3%) GO:0005737 (19.2%) "GO:0003746 (20.3%) GO:0005525 (20.3%) GO:0003924 (19.8%)" ribosome disassembly (20.3%) cytoplasm (19.2%) "translation elongation factor activity (20.3%) GTP binding (20.3%) GTPase activity (19.8%)" "IPR000640 (6.4%) IPR005517 (6.4%) IPR014721 (6.4%)" "Elongation factor EFG, domain V-like (6.4%) Translation elongation factor EFG/EF2, domain IV (6.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.4%)" AVYYIEQLLR LKLADDEFVSIAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.-.-.- (100%) Hydrolases (100%) GO:0009117 (50%) "GO:0003824 (43.3%) GO:0016787 (6.7%)" nucleotide metabolic process (50%) "catalytic activity (43.3%) hydrolase activity (6.7%)" "IPR001310 (33.3%) IPR011146 (33.3%) IPR036265 (33.3%)" "Histidine triad (HIT) protein (33.3%) HIT-like domain (33.3%) HIT-like superfamily (33.3%)" GRFFIAPGEEVYAGQVVGEHTKDNDLVVNVTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0000027 (10%) GO:0009409 (10%) GO:0010467 (10%)" "GO:0005829 (10%) GO:1990904 (10%)" "GO:0000049 (10%) GO:0003924 (10%) GO:0005525 (10%)" "ribosomal large subunit assembly (10%) response to cold (10%) gene expression (10%)" "cytosol (10%) ribonucleoprotein complex (10%)" "tRNA binding (10%) GTPase activity (10%) GTP binding (10%)" "IPR000640 (6.7%) IPR000795 (6.7%) IPR004161 (6.7%)" "Elongation factor EFG, domain V-like (6.7%) Translational (tr)-type GTP-binding domain (6.7%) Translation elongation factor EFTu-like, domain 2 (6.7%)" AAGAVSFLVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (19.5%) GO:0005829 (19.5%) "GO:0002161 (20.3%) GO:0004832 (20.3%) GO:0005524 (20.3%)" valyl-tRNA aminoacylation (19.5%) cytosol (19.5%) "aminoacyl-tRNA deacylase activity (20.3%) valine-tRNA ligase activity (20.3%) ATP binding (20.3%)" "IPR001412 (9.1%) IPR002300 (9.1%) IPR002303 (9.1%)" "Aminoacyl-tRNA synthetase, class I, conserved site (9.1%) Aminoacyl-tRNA synthetase, class Ia (9.1%) Valine-tRNA ligase (9.1%)" ATGTTTITASSKDRDVK Parabacteroides merdae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides merdae "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" DLVAGAVSMEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" LSHEFTGTFTGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.1.3 (100%) glutamate dehydrogenase [NAD(P)(+)] (100%) GO:0006537 (26%) GO:0005829 (26%) "GO:0004354 (26%) GO:0000166 (22.1%)" glutamate biosynthetic process (26%) cytosol (26%) "glutamate dehydrogenase (NADP+) activity (26%) nucleotide binding (22.1%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" NESRQEGAANEENQNVSR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (32.8%) "GO:0003723 (32.8%) GO:0120159 (32.8%) GO:0016829 (1.7%)" enzyme-directed rRNA pseudouridine synthesis (32.8%) "RNA binding (32.8%) rRNA pseudouridine synthase activity (32.8%) lyase activity (1.7%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" RNELALIISPDGKVPASIKQDAWFSMGTFDAGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0046872 (87.5%) GO:0008127 (12.5%)" "metal ion binding (87.5%) quercetin 2,3-dioxygenase activity (12.5%)" "IPR003829 (20%) IPR011051 (20%) IPR012093 (20%)" "Pirin, N-terminal domain (20%) RmlC-like cupin domain superfamily (20%) Pirin (20%)" SDMEKNLDAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR007139 (100%) Protein of unknown function DUF349 (100%) LNAHQAQYFDLHLSELAQSLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" WKEDSAVQLGEFIEQLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004818 (16.7%) GO:0005524 (16.7%)" glutamyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR000924 (10%) IPR001412 (10%) IPR004527 (10%)" "Glutamyl/glutaminyl-tRNA synthetase (10%) Aminoacyl-tRNA synthetase, class I, conserved site (10%) Glutamate-tRNA ligase, bacterial/mitochondrial (10%)" IQNDKNLTVTGISIEGFASPEGPLKFNEQLSQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" TYGGHGEQMAVFASTAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006108 (32.3%) GO:0006089 (3.8%)" "GO:0016615 (27.1%) GO:0016616 (27.1%) GO:0030060 (6%)" "malate metabolic process (32.3%) lactate metabolic process (3.8%)" "malate dehydrogenase activity (27.1%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (27.1%) L-malate dehydrogenase (NAD+) activity (6%)" "IPR001236 (17%) IPR015955 (17%) IPR022383 (17%)" "Lactate/malate dehydrogenase, N-terminal (17%) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (17%) Lactate/malate dehydrogenase, C-terminal (17%)" VEQFDKGLEIIKELGIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" FVIGGPQGDTGLTGR root 2.5.1.6 (100%) methionine adenosyltransferase (100%) "GO:0006556 (16.8%) GO:0006730 (16.8%)" GO:0005737 (16%) "GO:0004478 (16.8%) GO:0005524 (16.8%) GO:0000287 (15.8%)" "S-adenosylmethionine biosynthetic process (16.8%) one-carbon metabolic process (16.8%)" cytoplasm (16%) "methionine adenosyltransferase activity (16.8%) ATP binding (16.8%) magnesium ion binding (15.8%)" "IPR002133 (16.7%) IPR022630 (16.7%) IPR022631 (16.7%)" "S-adenosylmethionine synthetase (16.7%) S-adenosylmethionine synthetase, C-terminal (16.7%) S-adenosylmethionine synthetase, conserved site (16.7%)" VREDEGGTYGVYVGGTLQKYPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.24.55 (100%) pitrilysin (100%) GO:0006508 (33.3%) "GO:0004222 (33.3%) GO:0046872 (33.3%)" proteolysis (33.3%) "metalloendopeptidase activity (33.3%) metal ion binding (33.3%)" "IPR001431 (20%) IPR007863 (20%) IPR011249 (20%)" "Peptidase M16, zinc-binding site (20%) Peptidase M16, C-terminal (20%) Metalloenzyme, LuxS/M16 peptidase-like (20%)" KVVVDSGDSQNLQPGQIVTAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.2%) GO:0000428 (17.2%) "GO:0003677 (17.2%) GO:0003899 (17.2%) GO:0000287 (15.5%)" DNA-templated transcription (17.2%) DNA-directed RNA polymerase complex (17.2%) "DNA binding (17.2%) DNA-directed RNA polymerase activity (17.2%) magnesium ion binding (15.5%)" "IPR007081 (9.9%) IPR045867 (9.9%) IPR000722 (8.9%)" "RNA polymerase Rpb1, domain 5 (9.9%) DNA-directed RNA polymerase, subunit beta-prime (9.9%) RNA polymerase, alpha subunit (8.9%)" GTEFHPGENIGMGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001684 (50%) IPR018261 (50%)" "Large ribosomal subunit protein bL27 (50%) Large ribosomal subunit protein bL27, conserved site (50%)" KVSTVHNAVSPLSQEIQDIVPNKNPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.4.-.- (66.7%) 2.4.1.250 (33.3%)" "Glycosyltransferases (66.7%) D-inositol-3-phosphate glycosyltransferase (33.3%)" "GO:0016757 (88.2%) GO:0016758 (5.9%) GO:0102710 (5.9%)" "glycosyltransferase activity (88.2%) hexosyltransferase activity (5.9%) D-inositol-3-phosphate glycosyltransferase activity (5.9%)" "IPR001296 (33.3%) IPR028098 (33.3%) IPR050194 (33.3%)" "Glycosyl transferase, family 1 (33.3%) Glycosyltransferase subfamily 4-like, N-terminal domain (33.3%) Glycosyltransferase group 1 (33.3%)" NRKPLLVACDVYRPAAIEQLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) "GO:0048500 (19.4%) GO:0005786 (0.6%)" "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (19.4%)" SRP-dependent cotranslational protein targeting to membrane (20%) "signal recognition particle (19.4%) signal recognition particle, endoplasmic reticulum targeting (0.6%)" "GTPase activity (20%) GTP binding (20%) 7S RNA binding (19.4%)" "IPR000897 (11.3%) IPR022941 (11.3%) IPR027417 (11.3%)" "Signal recognition particle, SRP54 subunit, GTPase domain (11.3%) Signal recognition particle, SRP54 subunit (11.3%) P-loop containing nucleoside triphosphate hydrolase (11.3%)" RYSDGLHQAIEAK root "7.4.2.8 (100%) 7.4.2.4 (0%)" "protein-secreting ATPase (100%) chloroplast protein-transporting ATPase (0%)" "GO:0006605 (11.5%) GO:0017038 (11.5%) GO:0043952 (11.4%)" "GO:0005886 (11.5%) GO:0005829 (11.5%) GO:0031522 (11.4%)" "GO:0005524 (11.5%) GO:0046872 (7.7%) GO:0004386 (0.3%)" "protein targeting (11.5%) protein import (11.5%) protein transport by the Sec complex (11.4%)" "plasma membrane (11.5%) cytosol (11.5%) cell envelope Sec protein transport complex (11.4%)" "ATP binding (11.5%) metal ion binding (7.7%) helicase activity (0.3%)" "IPR000185 (8%) IPR011115 (8%) IPR014018 (8%)" "Protein translocase subunit SecA (8%) SecA DEAD-like, N-terminal (8%) SecA motor DEAD (8%)" GTVFTHNAHSNAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.15 (100%) glutamate decarboxylase (100%) GO:0006538 (25%) GO:0005829 (25%) "GO:0004351 (25%) GO:0030170 (25%)" L-glutamate catabolic process (25%) cytosol (25%) "glutamate decarboxylase activity (25%) pyridoxal phosphate binding (25%)" "IPR002129 (25%) IPR010107 (25%) IPR015421 (25%)" "Pyridoxal phosphate-dependent decarboxylase (25%) Glutamate decarboxylase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%)" IGGAQFEQNWPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0033104 (100%) type VI protein secretion system complex (100%) IPR041408 (100%) Hemolysin coregulated protein (Hcp) TssD (100%) KMTEQSSFLSGLNAEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales LSPILDEFAKEFDGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR013766 (33.3%) IPR017937 (33.3%) IPR036249 (33.3%)" "Thioredoxin domain (33.3%) Thioredoxin, conserved site (33.3%) Thioredoxin-like superfamily (33.3%)" VMQHEFDHLDGK Bacteria Bacteria 3.5.1.88 (100%) peptide deformylase (100%) "GO:0043686 (25.7%) GO:0006412 (24.3%)" "GO:0042586 (25.7%) GO:0046872 (24.3%)" "obsolete co-translational protein modification (25.7%) translation (24.3%)" "peptide deformylase activity (25.7%) metal ion binding (24.3%)" "IPR023635 (50%) IPR036821 (50%)" "Peptide deformylase (50%) Peptide deformylase superfamily (50%)" KFFPGYVLVQMVMNDASWHLVR root "GO:0031564 (20.1%) GO:0006354 (19.9%) GO:0006353 (19.7%)" "GO:0005829 (20.1%) GO:0005840 (0%) GO:0005886 (0%)" "GO:0003735 (0%) GO:0008320 (0%) GO:0016491 (0%)" "transcription antitermination (20.1%) DNA-templated transcription elongation (19.9%) DNA-templated transcription termination (19.7%)" "cytosol (20.1%) ribosome (0%) plasma membrane (0%)" "structural constituent of ribosome (0%) protein transmembrane transporter activity (0%) oxidoreductase activity (0%)" "IPR006645 (11.2%) IPR036735 (11.2%) IPR043425 (11.2%)" "NusG-like, N-terminal (11.2%) NusG, N-terminal domain superfamily (11.2%) NusG-like (11.2%)" STVDFSNEALQAAEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.1.1.16 (100%) cysteine--tRNA ligase (100%) GO:0006423 (19.9%) GO:0005829 (19.9%) "GO:0004817 (19.9%) GO:0005524 (19.9%) GO:0008270 (19.5%)" cysteinyl-tRNA aminoacylation (19.9%) cytosol (19.9%) "cysteine-tRNA ligase activity (19.9%) ATP binding (19.9%) zinc ion binding (19.5%)" "IPR009080 (14.3%) IPR014729 (14.3%) IPR015273 (14.3%)" "Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (14.3%) Rossmann-like alpha/beta/alpha sandwich fold (14.3%) Cysteinyl-tRNA synthetase, class Ia, DALR (14.3%)" DSYLLYHEELESLVK Pseudomonadati Bacteria Pseudomonadati "1.5.1.7 (72.5%) 1.5.1.43 (15.7%) 1.-.-.- (5.9%)" "saccharopine dehydrogenase (NAD(+), L-lysine-forming) (72.5%) carboxynorspermidine synthase (15.7%) Oxidoreductases (5.9%)" "GO:0004754 (60.4%) GO:0016491 (24.5%) GO:0102143 (11.3%)" "saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (60.4%) oxidoreductase activity (24.5%) carboxynorspermidine dehydrogenase activity (11.3%)" "IPR032095 (33.5%) IPR005097 (33.3%) IPR036291 (33.2%)" "Saccharopine dehydrogenase-like, C-terminal (33.5%) Saccharopine dehydrogenase, NADP binding domain (33.3%) NAD(P)-binding domain superfamily (33.2%)" AVLESVGITDVLAK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006412 (16.8%) GO:0042254 (16.3%)" "GO:0005737 (16.5%) GO:0015935 (16.5%) GO:0005840 (0.2%)" "GO:0003735 (16.8%) GO:0019843 (16.6%)" "translation (16.8%) ribosome biogenesis (16.3%)" "cytoplasm (16.5%) small ribosomal subunit (16.5%) ribosome (0.2%)" "structural constituent of ribosome (16.8%) rRNA binding (16.6%)" "IPR005324 (14.4%) IPR014721 (14.4%) IPR020568 (14.4%)" "Small ribosomal subunit protein uS5, C-terminal (14.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (14.4%) Ribosomal protein uS5 domain 2-type superfamily (14.4%)" EPYECMGDVPNVCFPCAALHDPATGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.4.1.- (50%) 2.4.1.319 (50%)" "Hexosyltransferases (50%) beta-1,4-mannooligosaccharide phosphorylase (50%)" "GO:0016757 (71.4%) GO:0016798 (28.6%)" "glycosyltransferase activity (71.4%) hydrolase activity, acting on glycosyl bonds (28.6%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" LIDFIEVGMLMAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (13.3%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (13.3%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" MSYATSDENIIEAMRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" KAPVNCPACAHPQAYFEPMKQNY Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005506 (50%) GO:0016491 (21.4%) GO:0016692 (21.4%)" "iron ion binding (50%) oxidoreductase activity (21.4%) NADH peroxidase activity (21.4%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" NPQGGIVKQEAAIHISNLNLVDPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR003256 (17%) IPR005824 (17%) IPR008991 (17%)" "Large ribosomal subunit protein uL24 (17%) KOW (17%) Translation protein SH3-like domain superfamily (17%)" AETTTTPAPTATTTK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0010447 (7.7%) "GO:0042597 (84.6%) GO:0030288 (7.7%)" response to acidic pH (7.7%) "periplasmic space (84.6%) outer membrane-bounded periplasmic space (7.7%)" IPR023497 (100%) Acid shock protein (100%) YGKGETPESSGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.19 (100%) arginine--tRNA ligase (100%) GO:0006420 (25%) GO:0005737 (25%) "GO:0004814 (25%) GO:0005524 (25%)" arginyl-tRNA aminoacylation (25%) cytoplasm (25%) "arginine-tRNA ligase activity (25%) ATP binding (25%)" "IPR001278 (12.5%) IPR001412 (12.5%) IPR005148 (12.5%)" "Arginine-tRNA ligase (12.5%) Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Arginyl tRNA synthetase N-terminal domain (12.5%)" MTPIVSIIMGSTSDLPVMEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.99.18 (91.7%) 4.1.1.21 (8.3%)" "5-(carboxyamino)imidazole ribonucleotide mutase (91.7%) phosphoribosylaminoimidazole carboxylase (8.3%)" GO:0006189 (31.1%) "GO:0016020 (19.1%) GO:0005829 (0.4%)" "GO:0034023 (29.5%) GO:0016829 (18.3%) GO:0016853 (1.7%)" 'de novo' IMP biosynthetic process (31.1%) "membrane (19.1%) cytosol (0.4%)" "5-(carboxyamino)imidazole ribonucleotide mutase activity (29.5%) lyase activity (18.3%) isomerase activity (1.7%)" "IPR000031 (33.3%) IPR024694 (33.3%) IPR033747 (33.3%)" "PurE domain (33.3%) PurE, prokaryotic type (33.3%) Class I PurE (33.3%)" TVALWGLAFKPGTDDMR Pseudomonadati Bacteria Pseudomonadati 1.1.1.22 (100%) UDP-glucose 6-dehydrogenase (100%) "GO:0000271 (25.6%) GO:0006065 (23.3%)" "GO:0003979 (25.6%) GO:0051287 (25.6%)" "polysaccharide biosynthetic process (25.6%) UDP-glucuronate biosynthetic process (23.3%)" "UDP-glucose 6-dehydrogenase activity (25.6%) NAD binding (25.6%)" "IPR001732 (12.5%) IPR008927 (12.5%) IPR014026 (12.5%)" "UDP-glucose/GDP-mannose dehydrogenase, N-terminal (12.5%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (12.5%) UDP-glucose/GDP-mannose dehydrogenase, dimerisation (12.5%)" VGQEVVVQIVKEPISTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.1.26.12 (43.5%) 3.1.4.- (39.1%) 3.1.26.- (13%)" "ribonuclease E (43.5%) Phosphoric diester hydrolases (39.1%) Endoribonucleases producing 5'-phosphomonoesters (13%)" GO:0006364 (17%) GO:0005737 (17%) "GO:0003723 (17%) GO:0046872 (17%) GO:0004540 (15%)" rRNA processing (17%) cytoplasm (17%) "RNA binding (17%) metal ion binding (17%) RNA nuclease activity (15%)" "IPR004659 (25.1%) IPR012340 (25.1%) IPR019307 (25.1%)" "Ribonuclease E/G (25.1%) Nucleic acid-binding, OB-fold (25.1%) RNA-binding protein AU-1/Ribonuclease E/G (25.1%)" NTPYAAQMAAQDCAK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%) GO:0022627 (0.1%)" "GO:0003735 (20.1%) GO:0019843 (19.8%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (20.1%) rRNA binding (19.8%)" "IPR001971 (25.3%) IPR036967 (25.3%) IPR019981 (24.8%)" "Small ribosomal subunit protein uS11 (25.3%) Small ribosomal subunit protein uS11 superfamily (25.3%) Small ribosomal subunit protein uS11, bacteria (24.8%)" YRAPYTTNPDFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.8.3.- (94.4%) 3.1.2.1 (5.6%)" "CoA-transferases (94.4%) acetyl-CoA hydrolase (5.6%)" "GO:0006083 (25.1%) GO:0006084 (24.7%)" "GO:0003986 (25.1%) GO:0008775 (25.1%)" "acetate metabolic process (25.1%) acetyl-CoA metabolic process (24.7%)" "acetyl-CoA hydrolase activity (25.1%) acetate CoA-transferase activity (25.1%)" "IPR003702 (16.8%) IPR037171 (16.8%) IPR046433 (16.8%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.8%) NagB/RpiA transferase-like (16.8%) Acetyl-CoA hydrolase/transferase (16.8%)" SKAILAAAGIAEDVK Bacteria Bacteria "GO:0006412 (16.4%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0005829 (16.3%) GO:0015935 (16.3%) GO:0005840 (1.2%)" "GO:0003735 (16.5%) GO:0019843 (16.4%) GO:0000049 (15.9%)" "translation (16.4%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosol (16.3%) small ribosomal subunit (16.3%) ribosome (1.2%)" "structural constituent of ribosome (16.5%) rRNA binding (16.4%) tRNA binding (15.9%)" "IPR001892 (20.1%) IPR010979 (20.1%) IPR027437 (20%)" "Small ribosomal subunit protein uS13 (20.1%) Small ribosomal subunit protein uS13-like, H2TH (20.1%) Small ribosomal subunit protein uS13, C-terminal (20%)" IAQDKNVPVKGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.1.15 (100%) glutamate decarboxylase (100%) GO:0006538 (25%) GO:0005829 (25%) "GO:0004351 (25%) GO:0030170 (25%)" L-glutamate catabolic process (25%) cytosol (25%) "glutamate decarboxylase activity (25%) pyridoxal phosphate binding (25%)" "IPR002129 (25%) IPR010107 (25%) IPR015421 (25%)" "Pyridoxal phosphate-dependent decarboxylase (25%) Glutamate decarboxylase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%)" DNNNNNNNNNNYNNNNNNQR GYPYQEDLYVPGYFEVPIKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005980 (33.3%) "GO:0004134 (33.3%) GO:0004135 (33.3%)" glycogen catabolic process (33.3%) "4-alpha-glucanotransferase activity (33.3%) amylo-alpha-1,6-glucosidase activity (33.3%)" "IPR008928 (20%) IPR010401 (20%) IPR012341 (20%)" "Six-hairpin glycosidase superfamily (20%) Glycogen debranching enzyme (20%) Six-hairpin glycosidase-like superfamily (20%)" IAPALKNQFQYSSTMQIPVLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (17%) "GO:0005840 (17%) GO:1990904 (17%)" "GO:0003735 (17%) GO:0000049 (15.9%) GO:0019843 (15.9%)" translation (17%) "ribosome (17%) ribonucleoprotein complex (17%)" "structural constituent of ribosome (17%) tRNA binding (15.9%) rRNA binding (15.9%)" "IPR002132 (20%) IPR020930 (20%) IPR022803 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5, bacteria (20%) Large ribosomal subunit protein uL5 domain superfamily (20%)" TKEPGATGEPLYLDVK Bacteria Bacteria "1.2.7.1 (72.2%) 1.2.7.- (27.8%)" "pyruvate synthase (72.2%) With an iron-sulfur protein as acceptor (27.8%)" "GO:0006979 (15.1%) GO:0022900 (15.1%) GO:0044281 (9.3%)" "GO:0005506 (15.1%) GO:0030976 (15.1%) GO:0051539 (15.1%)" "response to oxidative stress (15.1%) electron transport chain (15.1%) small molecule metabolic process (9.3%)" "iron ion binding (15.1%) thiamine pyrophosphate binding (15.1%) 4 iron, 4 sulfur cluster binding (15.1%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" HYQTGEVIPAELIEKLDK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.15.5 (100%) peptidyl-dipeptidase Dcp (100%) GO:0006508 (19.1%) GO:0005829 (19.1%) "GO:0004180 (19.1%) GO:0004222 (19.1%) GO:0046872 (19.1%)" proteolysis (19.1%) cytosol (19.1%) "carboxypeptidase activity (19.1%) metalloendopeptidase activity (19.1%) metal ion binding (19.1%)" "IPR001567 (16.5%) IPR024077 (16.5%) IPR024079 (16.5%)" "Peptidase M3A/M3B catalytic domain (16.5%) Neurolysin/Thimet oligopeptidase, domain 2 (16.5%) Metallopeptidase, catalytic domain superfamily (16.5%)" ATIESTEDTSVIEAMLNSPFKPVEGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033104 (100%) type VI protein secretion system complex (100%) IPR041408 (100%) Hemolysin coregulated protein (Hcp) TssD (100%) DMVDGAPSTVKEGLAKDEAESLKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" TADQILVAAHGNSLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.2.11 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (100%) "GO:0006094 (33.3%) GO:0006096 (33.3%)" GO:0004619 (33.3%) "gluconeogenesis (33.3%) glycolytic process (33.3%)" phosphoglycerate mutase activity (33.3%) "IPR001345 (25%) IPR005952 (25%) IPR013078 (25%)" "Phosphoglycerate/bisphosphoglycerate mutase, active site (25%) Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%)" IDHINAVLNEYGINGIEDAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR025964 (100%) GGGtGRT protein (100%) AIASHCVMSGPASER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (18.6%) IPR000842 (18.6%) IPR005946 (18.6%)" "Phosphoribosyltransferase domain (18.6%) Phosphoribosyl pyrophosphate synthetase, conserved site (18.6%) Ribose-phosphate pyrophosphokinase (18.6%)" KDGLPEKAEEIINMLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.5%) GO:0015966 (12.5%)" "GO:0005737 (12.5%) GO:0070062 (12.5%) GO:1990742 (12.5%)" "GO:0004081 (12.5%) GO:0004820 (12.5%) GO:0005524 (12.5%)" "glycyl-tRNA aminoacylation (12.5%) diadenosine tetraphosphate biosynthetic process (12.5%)" "cytoplasm (12.5%) extracellular exosome (12.5%) microvesicle (12.5%)" "bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.5%) glycine-tRNA ligase activity (12.5%) ATP binding (12.5%)" "IPR002314 (11.1%) IPR002315 (11.1%) IPR004154 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Glycyl-tRNA synthetase (11.1%) Anticodon-binding (11.1%)" SLLREEIEGSGILSKDDIIDVMKK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19%) GO:0006352 (0.1%) GO:0006412 (0.1%)" "GO:0000428 (19.9%) GO:0005829 (0.3%) GO:0000345 (0.1%)" "GO:0003677 (19.2%) GO:0003899 (19.2%) GO:0032549 (18.3%)" "DNA-templated transcription (19%) DNA-templated transcription initiation (0.1%) translation (0.1%)" "DNA-directed RNA polymerase complex (19.9%) cytosol (0.3%) cytosolic DNA-directed RNA polymerase complex (0.1%)" "DNA binding (19.2%) DNA-directed RNA polymerase activity (19.2%) ribonucleoside binding (18.3%)" "IPR007642 (8.2%) IPR037034 (8.1%) IPR007644 (7.9%)" "RNA polymerase Rpb2, domain 2 (8.2%) RNA polymerase Rpb2, domain 2 superfamily (8.1%) RNA polymerase, beta subunit, protrusion (7.9%)" ALAMDEGVNYTAGLPVIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.1.1.262 (97.4%) 1.1.1.408 (2.6%)" "4-hydroxythreonine-4-phosphate dehydrogenase (97.4%) 4-phospho-D-threonate 3-dehydrogenase (2.6%)" "GO:0046872 (33.1%) GO:0051287 (33.1%) GO:0050570 (21.1%)" "metal ion binding (33.1%) NAD binding (33.1%) 4-hydroxythreonine-4-phosphate dehydrogenase activity (21.1%)" IPR005255 (100%) PdxA family (100%) FYHNPAVEGMLEQTEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.6.5.- (61.5%) 3.6.-.- (30.8%) 2.7.-.- (7.7%)" "Acting on GTP; involved in cellular and subcellular movement (61.5%) Acting on acid anhydrides (30.8%) Transferring phosphorus-containing groups (7.7%)" GO:0005737 (31.7%) "GO:0003924 (31.7%) GO:0005525 (31.7%) GO:0016301 (2.4%)" cytoplasm (31.7%) "GTPase activity (31.7%) GTP binding (31.7%) kinase activity (2.4%)" "IPR005129 (50%) IPR027417 (50%)" "SIMIBI class G3E GTPase, ArgK/MeaB (50%) P-loop containing nucleoside triphosphate hydrolase (50%)" NAIGQPAGVVRPGYSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.-.- (95.5%) 3.4.13.- (4.5%)" "Acting on peptide bonds (peptidases) (95.5%) Dipeptidases (4.5%)" GO:0006508 (32.8%) "GO:0016805 (34.4%) GO:0070004 (32.8%)" proteolysis (32.8%) "dipeptidase activity (34.4%) cysteine-type exopeptidase activity (32.8%)" IPR005322 (100%) Peptidase C69 (100%) NDYNSNVVQGFFDQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" EGFYNNTIFHR root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (33.7%) GO:0009245 (0.1%) GO:0061077 (0.1%)" "GO:0005737 (31.4%) GO:0005886 (0.1%) GO:0005829 (0.1%)" "GO:0003755 (33.9%) GO:0016853 (0.5%) GO:0008758 (0.1%)" "protein folding (33.7%) lipid A biosynthetic process (0.1%) obsolete chaperone-mediated protein folding (0.1%)" "cytoplasm (31.4%) plasma membrane (0.1%) cytosol (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (33.9%) isomerase activity (0.5%) UDP-2,3-diacylglucosamine hydrolase activity (0.1%)" "IPR002130 (20.2%) IPR029000 (20.2%) IPR020892 (20.2%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (20.2%) Cyclophilin-like domain superfamily (20.2%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (20.2%)" IDGAYIVNLQGDQHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) VLSGGVDANALQKPK Pseudomonadati Bacteria Pseudomonadati "3.6.4.- (99.4%) 3.6.1.- (0.3%) 3.6.3.14 (0.3%)" "Acting on ATP; involved in cellular and subcellular movement (99.4%) In phosphorus-containing anhydrides (0.3%) Transferred entry: 7.1.2.2 (0.3%)" "GO:0006353 (14.2%) GO:0006508 (0.1%)" "GO:0005829 (14.1%) GO:0043657 (0.1%)" "GO:0003723 (14.2%) GO:0005524 (14.2%) GO:0008186 (14.2%)" "DNA-templated transcription termination (14.2%) proteolysis (0.1%)" "cytosol (14.1%) host cell (0.1%)" "RNA binding (14.2%) ATP binding (14.2%) ATP-dependent activity, acting on RNA (14.2%)" "IPR000194 (11%) IPR003593 (11%) IPR004665 (11%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11%) AAA+ ATPase domain (11%) Transcription termination factor Rho (11%)" RIFHDFDPELK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.4.2.19 (100%) nicotinate-nucleotide diphosphorylase (carboxylating) (100%) "GO:0009435 (25%) GO:0034213 (25%)" GO:0005737 (25%) GO:0004514 (25%) "NAD+ biosynthetic process (25%) quinolinate catabolic process (25%)" cytoplasm (25%) nicotinate-nucleotide diphosphorylase (carboxylating) activity (25%) "IPR002638 (14.3%) IPR004393 (14.3%) IPR013785 (14.3%)" "Quinolinate phosphoribosyl transferase, C-terminal (14.3%) Nicotinate-nucleotide pyrophosphorylase (14.3%) Aldolase-type TIM barrel (14.3%)" VLNIFPSIDTGVCAASVR Bacteria Bacteria "1.11.1.24 (90.7%) 1.11.1.- (8.4%) 1.11.1.15 (0.5%)" "thioredoxin-dependent peroxiredoxin (90.7%) Peroxidases (8.4%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (0.5%)" GO:0034599 (46%) "GO:0005829 (0.1%) GO:0042597 (0.1%)" "GO:0008379 (52.7%) GO:0004601 (1%) GO:0004130 (0.1%)" cellular response to oxidative stress (46%) "cytosol (0.1%) periplasmic space (0.1%)" "thioredoxin peroxidase activity (52.7%) peroxidase activity (1%) cytochrome-c peroxidase activity (0.1%)" "IPR013740 (16.8%) IPR036249 (16.8%) IPR050455 (16.8%)" "Redoxin (16.8%) Thioredoxin-like superfamily (16.8%) Thiol Peroxidase Tpx Subfamily (16.8%)" KIQDDISPIYSAYADR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0003824 (33.3%) GO:0046872 (33.3%) GO:0051536 (33.3%)" "catalytic activity (33.3%) metal ion binding (33.3%) iron-sulfur cluster binding (33.3%)" "IPR007197 (32.4%) IPR013785 (32.4%) IPR050377 (32.4%)" "Radical SAM (32.4%) Aldolase-type TIM barrel (32.4%) Radical SAM PqqA peptide cyclase/Mycofactocin maturase MftC-like (32.4%)" AALDNFYAR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (18.6%) GO:0006164 (2%)" GO:0005737 (20.6%) "GO:0004642 (20.6%) GO:0046872 (19.1%) GO:0005524 (18.9%)" "'de novo' IMP biosynthetic process (18.6%) purine nucleotide biosynthetic process (2%)" cytoplasm (20.6%) "phosphoribosylformylglycinamidine synthase activity (20.6%) metal ion binding (19.1%) ATP binding (18.9%)" "IPR029062 (11.6%) IPR010918 (11.5%) IPR036676 (11.5%)" "Class I glutamine amidotransferase-like (11.6%) PurM-like, C-terminal domain (11.5%) PurM-like, C-terminal domain superfamily (11.5%)" TTTTVNKEPIPFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (3.8%) "GO:0000287 (19.2%) GO:0004743 (19.2%) GO:0005524 (19.2%)" response to stress (3.8%) "magnesium ion binding (19.2%) pyruvate kinase activity (19.2%) ATP binding (19.2%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" FGLFTTAGYVWPWK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" AIDALEGMKGDNEDETTGIEIVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" DGVAVMPDDEKVQELSGSDMAHWLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006508 (19.7%) GO:0009636 (19.7%) GO:0043418 (19.7%)" GO:0005737 (19.7%) "GO:0070005 (19.7%) GO:0046872 (1.5%)" "proteolysis (19.7%) response to toxic substance (19.7%) homocysteine catabolic process (19.7%)" cytoplasm (19.7%) "cysteine-type aminopeptidase activity (19.7%) metal ion binding (1.5%)" "IPR000169 (33.3%) IPR004134 (33.3%) IPR038765 (33.3%)" "Cysteine peptidase, cysteine active site (33.3%) Peptidase C1B, bleomycin hydrolase (33.3%) Papain-like cysteine peptidase superfamily (33.3%)" AVWGFNGTERPGAVYLAAVLAGHAQK Pseudomonadati Bacteria Pseudomonadati 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR005763 (11.2%) IPR009015 (11.2%) IPR012888 (11.2%)" "L-fucose isomerase (11.2%) L-fucose isomerase, N-terminal/central domain superfamily (11.2%) L-fucose isomerase, N-terminal-1 (11.2%)" CVGIQNEQLVHHDIIDAIENMK root 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (8.5%) GO:0030388 (8.5%) GO:0061621 (8.5%)" "GO:0005945 (8.5%) GO:0005737 (0%) GO:0005829 (0%)" "GO:0003872 (8.5%) GO:0005524 (8.5%) GO:0070095 (8.5%)" "fructose 6-phosphate metabolic process (8.5%) fructose 1,6-bisphosphate metabolic process (8.5%) canonical glycolysis (8.5%)" "6-phosphofructokinase complex (8.5%) cytoplasm (0%) cytosol (0%)" "6-phosphofructokinase activity (8.5%) ATP binding (8.5%) fructose-6-phosphate binding (8.5%)" "IPR035966 (16.9%) IPR000023 (16.9%) IPR015912 (16.9%)" "Phosphofructokinase superfamily (16.9%) Phosphofructokinase domain (16.9%) Phosphofructokinase, conserved site (16.9%)" FSFEGGTITLSSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.13.3 (100%) histidine kinase (100%) GO:0000155 (100%) phosphorelay sensor kinase activity (100%) "IPR001789 (14.3%) IPR003594 (14.3%) IPR003661 (14.3%)" "Signal transduction response regulator, receiver domain (14.3%) Histidine kinase/HSP90-like ATPase domain (14.3%) Signal transduction histidine kinase, dimerisation/phosphoacceptor domain (14.3%)" NIPTVLFIKDGEVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.8.4.2 (100%) protein-disulfide reductase (glutathione) (100%) GO:0045454 (33.3%) GO:0005829 (33.3%) "GO:0015035 (31%) GO:0019153 (2.4%)" cell redox homeostasis (33.3%) cytosol (33.3%) "protein-disulfide reductase activity (31%) protein-disulfide reductase (glutathione) activity (2.4%)" "IPR013766 (25.9%) IPR036249 (25.9%) IPR005746 (24.1%)" "Thioredoxin domain (25.9%) Thioredoxin-like superfamily (25.9%) Thioredoxin (24.1%)" TVDGPSHKDWR root "1.2.1.- (58.2%) 1.2.1.12 (41.8%)" "With NAD(+) or NADP(+) as acceptor (58.2%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (41.8%)" "GO:0006006 (14.9%) GO:0072524 (11.8%) GO:0006096 (6%)" "GO:0005829 (5.3%) GO:0030312 (1.7%) GO:0005737 (0.7%)" "GO:0051287 (19%) GO:0050661 (15.4%) GO:0004365 (14.9%)" "glucose metabolic process (14.9%) pyridine-containing compound metabolic process (11.8%) glycolytic process (6%)" "cytosol (5.3%) external encapsulating structure (1.7%) cytoplasm (0.7%)" "NAD binding (19%) NADP binding (15.4%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (14.9%)" "IPR020829 (18%) IPR020831 (18%) IPR036291 (17.6%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (18%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (18%) NAD(P)-binding domain superfamily (17.6%)" RLIAELNDFLAKHDAEFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.4%) GO:0006002 (13.8%)" GO:0005829 (14.4%) "GO:0003872 (14.4%) GO:0005524 (14.4%) GO:0046872 (14.4%)" "response to glucose (14.4%) fructose 6-phosphate metabolic process (13.8%)" cytosol (14.4%) "6-phosphofructokinase activity (14.4%) ATP binding (14.4%) metal ion binding (14.4%)" "IPR000023 (25.3%) IPR011183 (25.3%) IPR035966 (25.3%)" "Phosphofructokinase domain (25.3%) Pyrophosphate-dependent phosphofructokinase PfpB (25.3%) Phosphofructokinase superfamily (25.3%)" LVPLSHPLSSGDQVEVLTSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.7.2 (100%) guanosine-3',5'-bis(diphosphate) 3'-diphosphatase (100%) GO:0015969 (35.3%) GO:0005886 (35.3%) "GO:0008893 (11.8%) GO:0016787 (11.8%) GO:0016301 (5.9%)" guanosine tetraphosphate metabolic process (35.3%) plasma membrane (35.3%) "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity (11.8%) hydrolase activity (11.8%) kinase activity (5.9%)" "IPR002912 (10%) IPR003607 (10%) IPR004095 (10%)" "ACT domain (10%) HD/PDEase domain (10%) TGS (10%)" SLPNKIGYLLGLPTK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) "GO:0000428 (16.8%) GO:0031981 (0%)" "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0000287 (16.1%)" DNA-templated transcription (16.8%) "DNA-directed RNA polymerase complex (16.8%) nuclear lumen (0%)" "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) magnesium ion binding (16.1%)" "IPR007080 (9.1%) IPR045867 (9.1%) IPR006592 (9.1%)" "RNA polymerase Rpb1, domain 1 (9.1%) DNA-directed RNA polymerase, subunit beta-prime (9.1%) RNA polymerase, N-terminal (9.1%)" AGATYVSPFVGRLDDIASDGIELVRK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (16.9%) GO:0006098 (16.9%) GO:0042182 (15.4%)" GO:0005737 (16.9%) "GO:0004801 (16.9%) GO:0016832 (16.9%)" "carbohydrate metabolic process (16.9%) pentose-phosphate shunt (16.9%) ketone catabolic process (15.4%)" cytoplasm (16.9%) "transaldolase activity (16.9%) aldehyde-lyase activity (16.9%)" "IPR001585 (16.7%) IPR004731 (16.7%) IPR013785 (16.7%)" "Transaldolase/Fructose-6-phosphate aldolase (16.7%) Transaldolase type 3B/Fructose-6-phosphate aldolase (16.7%) Aldolase-type TIM barrel (16.7%)" NYVIAECCKPIPGDDVLGYIGDNNR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "2.7.6.5 (50%) 3.1.7.2 (50%)" "GTP diphosphokinase (50%) guanosine-3',5'-bis(diphosphate) 3'-diphosphatase (50%)" GO:0015969 (37.1%) GO:0005886 (37.1%) "GO:0016787 (14.5%) GO:0016301 (6.5%) GO:0008893 (3.2%)" guanosine tetraphosphate metabolic process (37.1%) plasma membrane (37.1%) "hydrolase activity (14.5%) kinase activity (6.5%) guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity (3.2%)" "IPR002912 (9.5%) IPR003607 (9.1%) IPR004095 (9.1%)" "ACT domain (9.5%) HD/PDEase domain (9.1%) TGS (9.1%)" GLAANYDIVVASNHLIHELDGR Streptococcus Bacteria Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus "2.7.1.69 (50%) 2.7.1.- (33.3%) 2.7.1.191 (16.7%)" "Transferred entry: 2.7.1.191, 2.7.1.192, 2.7.1.193, 2.7.1.194, 2.7.1.1952.7.1.196, 2.7.1.197, 2.7.1.198, 2.7.1.199, 2.7.1.200, 2.7.1.2012.7.1.202, 2.7.1.203, 2.7.1.204, 2.7.1.205, 2.7.1.206, 2.7.1.207 an2.7.1.208 (50%) Phosphotransferases with an alcohol group as acceptor (33.3%) protein-N(pi)-phosphohistidine--D-mannose phosphotransferase (16.7%)" GO:0009401 (50%) GO:0008982 (50%) phosphoenolpyruvate-dependent sugar phosphotransferase system (50%) protein-N(PI)-phosphohistidine-sugar phosphotransferase activity (50%) "IPR003501 (33.3%) IPR013011 (33.3%) IPR036095 (33.3%)" "Phosphotransferase system, EIIB component, type 2/3 (33.3%) Phosphotransferase system, EIIB component, type 2 (33.3%) PTS system IIB component-like superfamily (33.3%)" IIGEVQPDEIYNLAAMSHVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.2.1.47 (100%) GDP-mannose 4,6-dehydratase (100%) GO:0042351 (33.3%) "GO:0008446 (33.3%) GO:0070401 (33.3%)" 'de novo' GDP-L-fucose biosynthetic process (33.3%) "GDP-mannose 4,6-dehydratase activity (33.3%) NADP+ binding (33.3%)" "IPR006368 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "GDP-mannose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" WKEGEATLAPSLDLVGKI root "1.11.1.26 (97.8%) 1.11.1.15 (1.4%) 1.11.1.24 (0.8%)" "NADH-dependent peroxiredoxin (97.8%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (1.4%) thioredoxin-dependent peroxiredoxin (0.8%)" "GO:0006979 (14.7%) GO:0042744 (14.7%) GO:0045454 (14.7%)" "GO:0005829 (14.7%) GO:0016020 (0%) GO:0005737 (0%)" "GO:0008379 (14.7%) GO:0102039 (11.5%) GO:0051920 (0.1%)" "response to oxidative stress (14.7%) hydrogen peroxide catabolic process (14.7%) cell redox homeostasis (14.7%)" "cytosol (14.7%) membrane (0%) cytoplasm (0%)" "thioredoxin peroxidase activity (14.7%) NADH-dependent peroxiredoxin activity (11.5%) peroxiredoxin activity (0.1%)" "IPR019479 (14.4%) IPR036249 (14.4%) IPR050217 (14.3%)" "Peroxiredoxin, C-terminal (14.4%) Thioredoxin-like superfamily (14.4%) Thiol-specific antioxidant peroxiredoxin (14.3%)" MVPPPLAFDVLDAVMEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.4%) GO:0030388 (24.4%)" GO:0016020 (2.2%) "GO:0004332 (24.4%) GO:0008270 (24.4%)" "glycolytic process (24.4%) fructose 1,6-bisphosphate metabolic process (24.4%)" membrane (2.2%) "fructose-bisphosphate aldolase activity (24.4%) zinc ion binding (24.4%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" VKPHQVTLVPDAPDQITSNAGWDTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.99.2 (100%) pyridoxine 5'-phosphate synthase (100%) GO:0008615 (33.3%) GO:0005829 (33.3%) GO:0033856 (33.3%) pyridoxine biosynthetic process (33.3%) cytosol (33.3%) pyridoxine 5'-phosphate synthase activity (33.3%) "IPR004569 (34.4%) IPR013785 (32.8%) IPR036130 (32.8%)" "Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ (34.4%) Aldolase-type TIM barrel (32.8%) Pyridoxine 5'-phosphate synthase (32.8%)" FKGILQAEGAEIINEENWGLKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" AALNAHQAQYFDLHLSELAQSLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" LGACYCVLK root GO:0016020 (100%) membrane (100%) "IPR013783 (50%) IPR053896 (50%)" "Immunoglobulin-like fold (50%) Butyrophilin subfamily 3 member A2-like, Ig-C domain (50%)" VHEGDDFTNADR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (24.8%) "GO:0003746 (25.5%) GO:0003924 (24.8%) GO:0005525 (24.8%)" ribosome disassembly (24.8%) "translation elongation factor activity (25.5%) GTPase activity (24.8%) GTP binding (24.8%)" "IPR000640 (7.4%) IPR000795 (7.4%) IPR005225 (7.4%)" "Elongation factor EFG, domain V-like (7.4%) Translational (tr)-type GTP-binding domain (7.4%) Small GTP-binding domain (7.4%)" ANEAYLQGQLGNPKGEDQPNKK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "4.1.2.13 (99.4%) 4.1.2.- (0.6%)" "fructose-bisphosphate aldolase (99.4%) Aldehyde-lyases (0.6%)" "GO:0006094 (19.8%) GO:0006096 (19.8%)" GO:0005829 (19.8%) "GO:0004332 (19.8%) GO:0008270 (19.8%) GO:0016829 (0.6%)" "gluconeogenesis (19.8%) glycolytic process (19.8%)" cytosol (19.8%) "fructose-bisphosphate aldolase activity (19.8%) zinc ion binding (19.8%) lyase activity (0.6%)" "IPR006411 (33.4%) IPR013785 (33.4%) IPR000771 (33.2%)" "Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype (33.4%) Aldolase-type TIM barrel (33.4%) Fructose-bisphosphate aldolase, class-II (33.2%)" MSIGLPCFVSATPAGILELLKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.5.1.5 (50%) 3.5.4.9 (50%)" "methylenetetrahydrofolate dehydrogenase (NADP(+)) (50%) methenyltetrahydrofolate cyclohydrolase (50%)" "GO:0000105 (14.3%) GO:0006164 (14.3%) GO:0009086 (14.3%)" GO:0005829 (14.3%) "GO:0004477 (14.3%) GO:0004488 (14.3%)" "L-histidine biosynthetic process (14.3%) purine nucleotide biosynthetic process (14.3%) methionine biosynthetic process (14.3%)" cytosol (14.3%) "methenyltetrahydrofolate cyclohydrolase activity (14.3%) methylenetetrahydrofolate dehydrogenase (NADP+) activity (14.3%)" "IPR000672 (16.7%) IPR020630 (16.7%) IPR020631 (16.7%)" "Tetrahydrofolate dehydrogenase/cyclohydrolase (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (16.7%)" VGDILHNFEEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (15.7%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (15.7%)" "IPR001114 (14.4%) IPR027417 (14.4%) IPR033128 (14.4%)" "Adenylosuccinate synthetase (14.4%) P-loop containing nucleoside triphosphate hydrolase (14.4%) Adenylosuccinate synthase, active site (14.4%)" LTELVETSVETSRGEVEALK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR007139 (100%) Protein of unknown function DUF349 (100%) TLNSEASQATSPIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) NKIPGDGMVSGYGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (22.2%) GO:0009317 (22.2%) "GO:0003989 (22.2%) GO:0004658 (22.2%) GO:0016740 (11.1%)" carbon fixation (22.2%) acetyl-CoA carboxylase complex (22.2%) "acetyl-CoA carboxylase activity (22.2%) propionyl-CoA carboxylase activity (22.2%) transferase activity (11.1%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" TTLTESLLFESGIIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" STLTPVVISNMDEIKELIK root "2.7.1.199 (89.6%) 2.7.1.- (6.3%) 2.7.1.191 (4.2%)" "protein-N(pi)-phosphohistidine--D-glucose phosphotransferase (89.6%) Phosphotransferases with an alcohol group as acceptor (6.3%) protein-N(pi)-phosphohistidine--D-mannose phosphotransferase (4.2%)" "GO:0009401 (32.9%) GO:0034763 (0.1%) GO:0043610 (0.1%)" "GO:0005737 (32.7%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0016301 (32.8%) GO:0046872 (0.9%) GO:0016740 (0.3%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (32.9%) negative regulation of transmembrane transport (0.1%) regulation of carbohydrate utilization (0.1%)" "cytoplasm (32.7%) cytosol (0.1%) membrane (0.1%)" "kinase activity (32.8%) metal ion binding (0.9%) transferase activity (0.3%)" "IPR011055 (33.3%) IPR001127 (33.2%) IPR050890 (33.2%)" "Duplicated hybrid motif (33.3%) Phosphotransferase system, sugar-specific permease EIIA type 1 (33.2%) Phosphotransferase system EIIA component (33.2%)" VYNSVLNMYNYYVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" KVSQALDILTYTNK root "GO:0006412 (24.8%) GO:0002181 (0%) GO:0042255 (0%)" "GO:0022625 (24.7%) GO:0005840 (0.6%) GO:0005737 (0%)" "GO:0003735 (24.8%) GO:0019843 (24.7%) GO:0003729 (0%)" "translation (24.8%) cytoplasmic translation (0%) ribosome assembly (0%)" "cytosolic large ribosomal subunit (24.7%) ribosome (0.6%) cytoplasm (0%)" "structural constituent of ribosome (24.8%) rRNA binding (24.7%) mRNA binding (0%)" "IPR001063 (20%) IPR036394 (20%) IPR047867 (20%)" "Large ribosomal subunit protein uL22 (20%) Ribosomal protein uL22 superfamily (20%) Large ribosomal subunit protein uL22, bacteria/organella (20%)" VLYVWFDAPIGYISNTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0004825 (16.7%) GO:0005524 (16.7%) GO:0000049 (16.5%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "methionine-tRNA ligase activity (16.7%) ATP binding (16.7%) tRNA binding (16.5%)" "IPR015413 (8.4%) IPR023458 (8.4%) IPR014758 (8.4%)" "Methionyl/Leucyl tRNA synthetase (8.4%) Methionine-tRNA ligase, type 1 (8.4%) Methionyl-tRNA synthetase (8.4%)" VSVHDIIHPQTGELLVAGGEEITEDIAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" FAELLGEVVVADTK Bacteria Bacteria "1.11.1.1 (94.2%) 1.14.12.17 (3.8%) 1.-.-.- (1.9%)" "NADH peroxidase (94.2%) nitric oxide dioxygenase (3.8%) Oxidoreductases (1.9%)" "GO:0034605 (0.7%) GO:0042744 (0.7%) GO:0070301 (0.7%)" "GO:0005506 (46.9%) GO:0016491 (23.2%) GO:0016692 (13.3%)" "cellular response to heat (0.7%) hydrogen peroxide catabolic process (0.7%) cellular response to hydrogen peroxide (0.7%)" "iron ion binding (46.9%) oxidoreductase activity (23.2%) NADH peroxidase activity (13.3%)" "IPR003251 (12.5%) IPR009040 (12.5%) IPR009078 (12.5%)" "Rubrerythrin, diiron-binding domain (12.5%) Ferritin-like diiron domain (12.5%) Ferritin-like superfamily (12.5%)" LGIIESDPWLEPYSAAIEGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) "GO:0005737 (20%) GO:0016020 (1%)" "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (19%)" glycogen biosynthetic process (20%) "cytoplasm (20%) membrane (1%)" "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (19%)" "IPR004193 (12.7%) IPR006047 (12.7%) IPR013783 (12.7%)" "Glycoside hydrolase, family 13, N-terminal (12.7%) Glycosyl hydrolase family 13, catalytic domain (12.7%) Immunoglobulin-like fold (12.7%)" IAGELIPCVFHVSAR root "1.2.7.1 (86.9%) 1.2.7.- (9.1%) 1.2.1.51 (3%)" "pyruvate synthase (86.9%) With an iron-sulfur protein as acceptor (9.1%) pyruvate dehydrogenase (NADP(+)) (3%)" "GO:0006979 (15.7%) GO:0022900 (15%) GO:0044281 (8.2%)" "GO:0051539 (15.3%) GO:0005506 (15%) GO:0030976 (14.6%)" "response to oxidative stress (15.7%) electron transport chain (15%) small molecule metabolic process (8.2%)" "4 iron, 4 sulfur cluster binding (15.3%) iron ion binding (15%) thiamine pyrophosphate binding (14.6%)" "IPR002880 (8%) IPR029061 (8%) IPR050722 (8%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (8%) Thiamin diphosphate-binding fold (8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (8%)" MGMFDLLNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.-.- (100%) Acting on ester bonds (100%) "GO:0003676 (75%) GO:0016787 (25%)" "nucleic acid binding (75%) hydrolase activity (25%)" "IPR001667 (25%) IPR003156 (25%) IPR038763 (25%)" "DDH domain (25%) DHHA1 domain (25%) DHH phosphoesterase superfamily (25%)" SYDNNREGGYGNNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" WDESASNEEKLER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" KLPVYGDGSNVRDWLYVEDHCK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "4.2.1.46 (98.2%) 4.2.1.47 (1.8%)" "dTDP-glucose 4,6-dehydratase (98.2%) GDP-mannose 4,6-dehydratase (1.8%)" GO:0009225 (50%) GO:0008460 (50%) nucleotide-sugar metabolic process (50%) dTDP-glucose 4,6-dehydratase activity (50%) "IPR016040 (33.3%) IPR036291 (33.3%) IPR005888 (32.1%)" "NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%) dTDP-glucose 4,6-dehydratase (32.1%)" YANNALEPVISQQTIDYHYGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.15.1.1 (100%) superoxide dismutase (100%) GO:0005737 (33.3%) "GO:0004784 (33.3%) GO:0046872 (33.3%)" cytoplasm (33.3%) "superoxide dismutase activity (33.3%) metal ion binding (33.3%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" GSAIYKPGALHNFSLYLGGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR008323 (100%) Uncharacterised conserved protein UCP033563 (100%) GVVLLDVTPLSMGIETLGGVMTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0042026 (0.3%) GO:0051085 (0.3%)" "GO:0005524 (33%) GO:0140662 (33%) GO:0051082 (32.7%)" "protein refolding (0.3%) obsolete chaperone cofactor-dependent protein refolding (0.3%)" "ATP binding (33%) ATP-dependent protein folding chaperone (33%) unfolded protein binding (32.7%)" "IPR013126 (16.7%) IPR029047 (16.7%) IPR029048 (16.7%)" "Heat shock protein 70 family (16.7%) Heat shock protein 70kD, peptide-binding domain superfamily (16.7%) Heat shock protein 70kD, C-terminal domain superfamily (16.7%)" HGYELTTAEGDKIGVVTSGTMSPIRK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (17.3%) GO:0032259 (6.1%)" "GO:0005829 (17.3%) GO:0005960 (17.3%)" "GO:0004047 (17.3%) GO:0008483 (17.3%) GO:0008168 (6.1%)" "glycine decarboxylation via glycine cleavage system (17.3%) methylation (6.1%)" "cytosol (17.3%) glycine cleavage complex (17.3%)" "aminomethyltransferase activity (17.3%) transaminase activity (17.3%) methyltransferase activity (6.1%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" YRHEYLMDETNANFEDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) LIEFSGACAGCGETPYIK root "1.2.7.1 (87%) 1.2.1.51 (7.4%) 1.2.7.- (5.6%)" "pyruvate synthase (87%) pyruvate dehydrogenase (NADP(+)) (7.4%) With an iron-sulfur protein as acceptor (5.6%)" "GO:0006979 (16.7%) GO:0022900 (16.4%) GO:0044281 (0.5%)" "GO:0005506 (16.4%) GO:0030976 (16.4%) GO:0051539 (16.4%)" "response to oxidative stress (16.7%) electron transport chain (16.4%) small molecule metabolic process (0.5%)" "iron ion binding (16.4%) thiamine pyrophosphate binding (16.4%) 4 iron, 4 sulfur cluster binding (16.4%)" "IPR029061 (7.8%) IPR050722 (7.8%) IPR002869 (7.7%)" "Thiamin diphosphate-binding fold (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%) Pyruvate-flavodoxin oxidoreductase, central domain (7.7%)" TDEQTGQTVISGMGELHLDIIIDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.3%) GO:0005737 (19.2%) "GO:0003746 (20.5%) GO:0005525 (20.3%) GO:0003924 (19.7%)" ribosome disassembly (20.3%) cytoplasm (19.2%) "translation elongation factor activity (20.5%) GTP binding (20.3%) GTPase activity (19.7%)" "IPR005517 (6.3%) IPR009022 (6.3%) IPR014721 (6.3%)" "Translation elongation factor EFG/EF2, domain IV (6.3%) Elongation factor G, domain III (6.3%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.3%)" VNQIGSLTETLNAIEMAHR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.6%) GO:0005576 (16.6%) GO:0009986 (16.3%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.3%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.6%) extracellular region (16.6%) cell surface (16.3%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.3%)" "IPR000941 (16.8%) IPR020809 (16.8%) IPR020810 (16.8%)" "Enolase (16.8%) Enolase, conserved site (16.8%) Enolase, C-terminal TIM barrel domain (16.8%)" DKENGQFAMQLLTDAYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" VNLCGGGFTGQSQALR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (24.9%) "GO:0022627 (24.9%) GO:0005840 (0.3%)" "GO:0003723 (24.9%) GO:0003735 (24.9%)" translation (24.9%) "cytosolic small ribosomal subunit (24.9%) ribosome (0.3%)" "RNA binding (24.9%) structural constituent of ribosome (24.9%)" "IPR000754 (20.2%) IPR014721 (20.2%) IPR020568 (20.2%)" "Small ribosomal subunit protein uS9 (20.2%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (20.2%) Ribosomal protein uS5 domain 2-type superfamily (20.2%)" VLTSGQEATAEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (50%) GO:0005507 (50%) cytoplasm (50%) copper ion binding (50%) "IPR005627 (50%) IPR036822 (50%)" "CutC-like (50%) CutC-like domain superfamily (50%)" MNEAHPGCAHLELRDQYYNMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.11.4 (100%) tripeptide aminopeptidase (100%) "GO:0006508 (16.7%) GO:0043171 (16.7%)" GO:0005829 (16.7%) "GO:0008237 (16.7%) GO:0008270 (16.7%) GO:0045148 (16.7%)" "proteolysis (16.7%) peptide catabolic process (16.7%)" cytosol (16.7%) "metallopeptidase activity (16.7%) zinc ion binding (16.7%) tripeptide aminopeptidase activity (16.7%)" "IPR001261 (20%) IPR002933 (20%) IPR010161 (20%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%) Peptidase M20 (20%) Peptidase M20B, tripeptide aminopeptidase (20%)" CIEQPTYSYLTCCR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.48 (100%) uridine/cytidine kinase (100%) "GO:0044206 (19.4%) GO:0044211 (19.4%)" GO:0005737 (19.4%) "GO:0004849 (19.4%) GO:0005524 (19.4%) GO:0043771 (3.2%)" "UMP salvage (19.4%) CTP salvage (19.4%)" cytoplasm (19.4%) "uridine kinase activity (19.4%) ATP binding (19.4%) cytidine kinase activity (3.2%)" "IPR000764 (25%) IPR006083 (25%) IPR026008 (25%)" "Uridine kinase-like (25%) Phosphoribulokinase/uridine kinase (25%) Uridine kinase (25%)" IIGFTDNTGKVDYNQTLSEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (16.7%) IPR006665 (16.7%) IPR006690 (16.7%)" "Outer membrane protein, bacterial (16.7%) OmpA-like domain (16.7%) Outer membrane protein, OmpA-like, conserved site (16.7%)" KITELGIYPAVDPLESTSR root "7.1.2.2 (99.2%) 3.6.3.14 (0.8%)" "H(+)-transporting two-sector ATPase (99.2%) Transferred entry: 7.1.2.2 (0.8%)" "GO:0045259 (22.8%) GO:0005886 (21.9%)" "GO:0005524 (22.8%) GO:0046933 (22.8%) GO:0016787 (9%)" "proton-transporting ATP synthase complex (22.8%) plasma membrane (21.9%)" "ATP binding (22.8%) proton-transporting ATP synthase activity, rotational mechanism (22.8%) hydrolase activity (9%)" "IPR000194 (10%) IPR005722 (10%) IPR020003 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) ATP synthase, F1 complex, beta subunit (10%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (10%)" VNDVVVTELGTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.99.- (100%) Transferring other groups (100%) "GO:0000455 (31.5%) GO:0001522 (1.4%) GO:0006364 (1.4%)" "GO:0003723 (32.9%) GO:0120159 (31.5%) GO:0009982 (1.4%)" "enzyme-directed rRNA pseudouridine synthesis (31.5%) pseudouridine synthesis (1.4%) rRNA processing (1.4%)" "RNA binding (32.9%) rRNA pseudouridine synthase activity (31.5%) pseudouridine synthase activity (1.4%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" GWETFTDAVIHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.2.27 (100%) uracil-DNA glycosylase (100%) GO:0097510 (34.4%) GO:0005737 (31.3%) GO:0004844 (34.4%) base-excision repair, AP site formation via deaminated base removal (34.4%) cytoplasm (31.3%) uracil DNA N-glycosylase activity (34.4%) "IPR002043 (25%) IPR005122 (25%) IPR018085 (25%)" "Uracil-DNA glycosylase family 1 (25%) Uracil-DNA glycosylase-like (25%) Uracil-DNA glycosylase, active site (25%)" GTQGEGLTFYGPEEATIAYNEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" ATLEDLGQAKR root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (16.8%) GO:1990220 (0.1%) GO:0005829 (0%)" "GO:0140662 (17%) GO:0005524 (17%) GO:0016853 (16.9%)" "protein refolding (17%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (16.8%) GroEL-GroES complex (0.1%) cytosol (0%)" "ATP-dependent protein folding chaperone (17%) ATP binding (17%) isomerase activity (16.9%)" "IPR001844 (17%) IPR027409 (17%) IPR002423 (16.7%)" "Chaperonin Cpn60/GroEL (17%) GroEL-like apical domain superfamily (17%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%)" DGPTLFCPPIGHVQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.3.1.21 (95.2%) 2.1.2.- (4.8%)" "phosphoribosylglycinamide formyltransferase 2 (95.2%) Hydroxymethyl-, formyl- and related transferases (4.8%)" "GO:0006189 (15.9%) GO:0006164 (0.4%) GO:0009152 (0.4%)" GO:0005829 (16.7%) "GO:0005524 (16.7%) GO:0000287 (16.3%) GO:0004644 (16.3%)" "'de novo' IMP biosynthetic process (15.9%) purine nucleotide biosynthetic process (0.4%) purine ribonucleotide biosynthetic process (0.4%)" cytosol (16.7%) "ATP binding (16.7%) magnesium ion binding (16.3%) phosphoribosylglycinamide formyltransferase activity (16.3%)" "IPR003135 (12.7%) IPR011761 (12.7%) IPR048740 (12.7%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.7%) ATP-grasp fold (12.7%) PurT, C-terminal (12.7%)" SRPSLPERIDNVLVCPNSNCISHAEPVSSSFAVR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006207 (21.8%) GO:0006221 (21.8%)" "GO:0009347 (21.8%) GO:0005737 (0.3%)" "GO:0046872 (21.5%) GO:0016740 (12.5%) GO:0004070 (0.3%)" "'de novo' pyrimidine nucleobase biosynthetic process (21.8%) pyrimidine nucleotide biosynthetic process (21.8%)" "aspartate carbamoyltransferase complex (21.8%) cytoplasm (0.3%)" "metal ion binding (21.5%) transferase activity (12.5%) aspartate carbamoyltransferase activity (0.3%)" "IPR002801 (20%) IPR020542 (20%) IPR020545 (20%)" "Aspartate transcarbamylase regulatory subunit (20%) Aspartate carbamoyltransferase regulatory subunit, C-terminal (20%) Aspartate carbamoyltransferase regulatory subunit, N-terminal (20%)" MSENEEIVLVGFGTLIPRPQTQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" IKRPAYIWWNFPVSDYVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.2.1.169 (98%) 3.2.1.35 (1%) 3.2.1.52 (1%)" "protein O-GlcNAcase (98%) hyaluronoglucosaminidase (1%) beta-N-acetylhexosaminidase (1%)" "GO:0005975 (43.5%) GO:1901135 (0.9%) GO:0006517 (0.4%)" "GO:0016231 (43.5%) GO:0102571 (9.9%) GO:0004415 (0.4%)" "carbohydrate metabolic process (43.5%) carbohydrate derivative metabolic process (0.9%) protein deglycosylation (0.4%)" "beta-N-acetylglucosaminidase activity (43.5%) [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine/L-threonine O-N-acetyl-alpha-D-glucosaminase activity (9.9%) hyalurononglucosaminidase activity (0.4%)" "IPR011496 (12.6%) IPR017853 (12.6%) IPR051822 (12.6%)" "Beta-N-acetylglucosaminidase, catalytic domain (12.6%) Glycoside hydrolase superfamily (12.6%) Glycosyl Hydrolase Family 84 (12.6%)" SCGVFSSIHEQSGDINR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.5.1.6 (100%) methionine adenosyltransferase (100%) "GO:0006556 (16.9%) GO:0006730 (16.2%)" GO:0005737 (16.2%) "GO:0004478 (16.9%) GO:0005524 (16.9%) GO:0000287 (16.2%)" "S-adenosylmethionine biosynthetic process (16.9%) one-carbon metabolic process (16.2%)" cytoplasm (16.2%) "methionine adenosyltransferase activity (16.9%) ATP binding (16.9%) magnesium ion binding (16.2%)" "IPR002133 (16.8%) IPR022628 (16.8%) IPR022629 (16.8%)" "S-adenosylmethionine synthetase (16.8%) S-adenosylmethionine synthetase, N-terminal (16.8%) S-adenosylmethionine synthetase, central domain (16.8%)" INLNQPMADILKELDKYPVSTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" EGVLSDKQLEDGMTEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides AYEIGILGYYVELEGDKKGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR013022 (33.3%) IPR036237 (33.3%) IPR050312 (33.3%)" "Xylose isomerase-like, TIM barrel domain (33.3%) Xylose isomerase-like superfamily (33.3%) IolE/XylA/MocC-like (33.3%)" QLDTMFKETGHVNAYFPLLIPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.1%) IPR004154 (11.1%) IPR004499 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Anticodon-binding (11.1%) Proline-tRNA ligase, class IIa, archaeal-type (11.1%)" FNPPKVEGKDDVTGEELTTR root 2.7.4.3 (100%) adenylate kinase (100%) "GO:0044209 (17.1%) GO:0006172 (0.1%) GO:0006270 (0.1%)" "GO:0005737 (27%) GO:0005829 (0.1%) GO:0005758 (0.1%)" "GO:0004017 (27.3%) GO:0005524 (27.2%) GO:0016301 (0.3%)" "AMP salvage (17.1%) ADP biosynthetic process (0.1%) DNA replication initiation (0.1%)" "cytoplasm (27%) cytosol (0.1%) mitochondrial intermembrane space (0.1%)" "AMP kinase activity (27.3%) ATP binding (27.2%) kinase activity (0.3%)" "IPR007862 (20.1%) IPR027417 (20.1%) IPR000850 (20.1%)" "Adenylate kinase, active site lid domain (20.1%) P-loop containing nucleoside triphosphate hydrolase (20.1%) Adenylate kinase/UMP-CMP kinase (20.1%)" IDAEAAEEAPKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" LGIAAQSVGLSQAAYNEALAYAKDR Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.3.99.- (100%) With other acceptors (100%) "GO:0003995 (49.3%) GO:0050660 (49.3%) GO:0016937 (1.4%)" "acyl-CoA dehydrogenase activity (49.3%) flavin adenine dinucleotide binding (49.3%) short-chain fatty acyl-CoA dehydrogenase activity (1.4%)" "IPR006089 (9.2%) IPR009075 (9.2%) IPR020964 (9.2%)" "Acyl-CoA dehydrogenase, conserved site (9.2%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.2%) Acyl-CoA dehydrogenase, C-terminal (9.2%)" AFDVDNEVYYADLNWKELMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0009328 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) phenylalanine-tRNA ligase complex (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002547 (7.7%) IPR004532 (7.7%) IPR005121 (7.7%)" "tRNA-binding domain (7.7%) Phenylalanine-tRNA ligase, class IIc, beta subunit, bacterial type (7.7%) Ferrodoxin-fold anticodon-binding domain (7.7%)" GYDLEDLAHSIIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (25%) "GO:0036440 (23.9%) GO:0046912 (1.1%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (25%) "citrate synthase activity (23.9%) acyltransferase activity, acyl groups converted into alkyl on transfer (1.1%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" LGYVPNNIGIGQNVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.4%) GO:0006516 (19.4%)" GO:0005829 (19.4%) "GO:0000224 (19.4%) GO:0030246 (19.4%) GO:0016798 (3.2%)" "carbohydrate metabolic process (19.4%) glycoprotein catabolic process (19.4%)" cytosol (19.4%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.4%) carbohydrate binding (19.4%) hydrolase activity, acting on glycosyl bonds (3.2%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" ACGAALEFAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50%) GO:0046872 (50%)" "alkaline phosphatase activity (50%) metal ion binding (50%)" "IPR001952 (50%) IPR017850 (50%)" "Alkaline phosphatase (50%) Alkaline-phosphatase-like, core domain superfamily (50%)" LTGDEDAIGNYYYNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0071709 (48.6%) GO:0009279 (51.4%) membrane assembly (48.6%) cell outer membrane (51.4%) "IPR010827 (18.3%) IPR034746 (18.3%) IPR039910 (18.3%)" "POTRA domain, BamA/TamA-like (18.3%) POTRA domain (18.3%) Surface antigen D15-like (18.3%)" CHYCEKEQSKEGIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006207 (21%) GO:0006221 (21%)" GO:0009347 (21%) "GO:0046872 (19.8%) GO:0016740 (17.3%)" "'de novo' pyrimidine nucleobase biosynthetic process (21%) pyrimidine nucleotide biosynthetic process (21%)" aspartate carbamoyltransferase complex (21%) "metal ion binding (19.8%) transferase activity (17.3%)" "IPR002801 (20.5%) IPR020542 (20.5%) IPR036792 (20.5%)" "Aspartate transcarbamylase regulatory subunit (20.5%) Aspartate carbamoyltransferase regulatory subunit, C-terminal (20.5%) Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily (20.5%)" SNIQDKELILR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0006397 (25%) GO:0006417 (25%)" "GO:0003727 (25%) GO:0003729 (25%)" "mRNA processing (25%) regulation of translation (25%)" "single-stranded RNA binding (25%) mRNA binding (25%)" "IPR011990 (51.2%) IPR019734 (43.9%) IPR013105 (4.1%)" "Tetratricopeptide-like helical domain superfamily (51.2%) Tetratricopeptide repeat (43.9%) Tetratricopeptide repeat 2 (4.1%)" TIGGIIIPDTAK root "GO:0051085 (0.6%) GO:0042026 (0.1%)" GO:0005737 (15.7%) "GO:0005524 (16.8%) GO:0044183 (16.7%) GO:0046872 (16.7%)" "obsolete chaperone cofactor-dependent protein refolding (0.6%) protein refolding (0.1%)" cytoplasm (15.7%) "ATP binding (16.8%) protein folding chaperone (16.7%) metal ion binding (16.7%)" "IPR011032 (32.3%) IPR020818 (32.3%) IPR037124 (32.3%)" "GroES-like superfamily (32.3%) GroES chaperonin family (32.3%) GroES chaperonin superfamily (32.3%)" YSPNAIIVVISNPMDTMTYLALK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (26.4%) GO:0006099 (23.9%)" "GO:0004459 (26.4%) GO:0030060 (23.4%)" "lactate metabolic process (26.4%) tricarboxylic acid cycle (23.9%)" "L-lactate dehydrogenase (NAD+) activity (26.4%) L-malate dehydrogenase (NAD+) activity (23.4%)" "IPR001236 (17%) IPR015955 (17%) IPR022383 (17%)" "Lactate/malate dehydrogenase, N-terminal (17%) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (17%) Lactate/malate dehydrogenase, C-terminal (17%)" QAVNSNLIDVIATDHAPHLLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.5.2.3 (100%) dihydroorotase (100%) GO:0006145 (22.5%) GO:0005737 (22.5%) "GO:0004038 (22.5%) GO:0046872 (22.5%) GO:0004151 (10%)" purine nucleobase catabolic process (22.5%) cytoplasm (22.5%) "allantoinase activity (22.5%) metal ion binding (22.5%) dihydroorotase activity (10%)" "IPR002195 (20%) IPR006680 (20%) IPR011059 (20%)" "Dihydroorotase, conserved site (20%) Amidohydrolase-related (20%) Metal-dependent hydrolase, composite domain superfamily (20%)" GNTAVMFSQVANAPAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" HFGISMDQVENCR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (40%) "GO:0016615 (20%) GO:0016616 (20%) GO:0030060 (20%)" malate metabolic process (40%) "malate dehydrogenase activity (20%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (20%) L-malate dehydrogenase (NAD+) activity (20%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" QADREGYPEVAEAYKR Bacteria Bacteria 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0034605 (0.5%) GO:0042744 (0.5%) GO:0070301 (0.5%)" "GO:0005506 (47.9%) GO:0016491 (23.8%) GO:0004601 (15.3%)" "cellular response to heat (0.5%) hydrogen peroxide catabolic process (0.5%) cellular response to hydrogen peroxide (0.5%)" "iron ion binding (47.9%) oxidoreductase activity (23.8%) peroxidase activity (15.3%)" "IPR003251 (12.6%) IPR009040 (12.6%) IPR045236 (12.5%)" "Rubrerythrin, diiron-binding domain (12.6%) Ferritin-like diiron domain (12.6%) Reverse rubrerythrin, di-iron-binding domain (12.5%)" KNEPEWLLEFR root GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR037284 (20.1%) IPR045595 (20.1%) IPR055346 (20.1%)" "SUF system FeS cluster assembly, SufBD superfamily (20.1%) SUF system FeS cluster assembly, SufBD, N-terminal (20.1%) SUF system FeS cluster assembly, SufBD (20.1%)" KIEAALADKEAELMQF root "GO:0002184 (32.9%) GO:0006412 (0.4%)" "GO:0005829 (32.9%) GO:0005737 (0.4%)" "GO:0043023 (32.9%) GO:0003746 (0.4%)" "cytoplasmic translational termination (32.9%) translation (0.4%)" "cytosol (32.9%) cytoplasm (0.4%)" "ribosomal large subunit binding (32.9%) translation elongation factor activity (0.4%)" "IPR023584 (33.5%) IPR036191 (33.5%) IPR002661 (33.1%)" "Ribosome recycling factor domain (33.5%) RRF superfamily (33.5%) Ribosome recycling factor (33.1%)" QGPVTPWGKPALGYK IYTKDISFEAPNAPHVFQK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0015031 (20.3%) GO:0051262 (20.3%) GO:0006457 (18.7%)" "GO:0005737 (19%) GO:0005829 (0.2%)" "GO:0051082 (20.3%) GO:0015038 (0.2%) GO:0070678 (0.2%)" "protein transport (20.3%) protein tetramerization (20.3%) protein folding (18.7%)" "cytoplasm (19%) cytosol (0.2%)" "unfolded protein binding (20.3%) glutathione disulfide oxidoreductase activity (0.2%) preprotein binding (0.2%)" "IPR003708 (49%) IPR035958 (49%) IPR002109 (0.4%)" "Bacterial protein export chaperone SecB (49%) SecB-like superfamily (49%) Glutaredoxin (0.4%)" ALFESYDR Bacteria Bacteria GO:0005886 (100%) plasma membrane (100%) "IPR025964 (86.4%) IPR003740 (1.5%) IPR007421 (1.5%)" "GGGtGRT protein (86.4%) Uncharacterised membrane protein YitT (1.5%) Schlafen, AlbA_2 domain (1.5%)" AAEEAKPSTETIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR008969 (33.3%) IPR024620 (33.3%) IPR053968 (33.3%)" "Carboxypeptidase-like, regulatory domain superfamily (33.3%) Domain of unknown function DUF3869 (33.3%) BF9343_1606-like, C-terminal (33.3%)" SEEIEHSNQDLDER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" GVKSDLSELSLSDLKGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" VRPGILAVEALNLMQSR root 5.3.1.13 (100%) arabinose-5-phosphate isomerase (100%) "GO:0009103 (23.7%) GO:0005975 (0.7%) GO:1901135 (0.5%)" GO:0005886 (0.2%) "GO:0019146 (25.1%) GO:0097367 (24.4%) GO:0046872 (22.8%)" "lipopolysaccharide biosynthetic process (23.7%) carbohydrate metabolic process (0.7%) carbohydrate derivative metabolic process (0.5%)" plasma membrane (0.2%) "arabinose-5-phosphate isomerase activity (25.1%) carbohydrate derivative binding (24.4%) metal ion binding (22.8%)" "IPR046342 (14.6%) IPR050986 (14.6%) IPR000644 (14.5%)" "CBS domain superfamily (14.6%) SIS family GutQ/KpsF subfamily isomerases (14.6%) CBS domain (14.5%)" FHPVEALWEAYNAGQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0030170 (100%) pyridoxal phosphate binding (100%) "IPR001608 (33.3%) IPR011078 (33.3%) IPR029066 (33.3%)" "Alanine racemase, N-terminal (33.3%) Pyridoxal phosphate homeostasis protein (33.3%) PLP-binding barrel (33.3%)" FAFEQADGVRPFDLAVDQMFGSSPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (18.7%) GO:0006164 (1.9%)" GO:0005737 (20.6%) "GO:0004642 (20.6%) GO:0005524 (19.2%) GO:0046872 (19.2%)" "'de novo' IMP biosynthetic process (18.7%) purine nucleotide biosynthetic process (1.9%)" cytoplasm (20.6%) "phosphoribosylformylglycinamidine synthase activity (20.6%) ATP binding (19.2%) metal ion binding (19.2%)" "IPR010918 (11.5%) IPR029062 (11.5%) IPR036676 (11.5%)" "PurM-like, C-terminal domain (11.5%) Class I glutamine amidotransferase-like (11.5%) PurM-like, C-terminal domain superfamily (11.5%)" ELVSASNLQDKDLVLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (51.4%) IPR019734 (48.6%)" "Tetratricopeptide-like helical domain superfamily (51.4%) Tetratricopeptide repeat (48.6%)" MKEFPDTQYTVYGYADSATGTPAFNKELSQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (25%) IPR006665 (25%) IPR036737 (25%)" "Outer membrane protein, bacterial (25%) OmpA-like domain (25%) OmpA-like domain superfamily (25%)" FFPAEANGGVK root "4.1.2.14 (76%) 4.1.3.42 (15.7%) 4.1.3.16 (7.9%)" "2-dehydro-3-deoxy-phosphogluconate aldolase (76%) (4S)-4-hydroxy-2-oxoglutarate aldolase (15.7%) 4-hydroxy-2-oxoglutarate aldolase (7.9%)" "GO:0009255 (0.3%) GO:0019521 (0.1%)" "GO:0005737 (11%) GO:0005829 (0.2%) GO:0016020 (0.2%)" "GO:0008675 (33.8%) GO:0008700 (33.4%) GO:0016829 (16.3%)" "Entner-Doudoroff pathway through 6-phosphogluconate (0.3%) D-gluconate metabolic process (0.1%)" "cytoplasm (11%) cytosol (0.2%) membrane (0.2%)" "2-dehydro-3-deoxy-phosphogluconate aldolase activity (33.8%) (R,S)-4-hydroxy-2-oxoglutarate aldolase activity (33.4%) lyase activity (16.3%)" "IPR000887 (25.2%) IPR013785 (25.2%) IPR031338 (24.9%)" "KDPG/KHG aldolase (25.2%) Aldolase-type TIM barrel (25.2%) KDPG/KHG aldolase, active site 2 (24.9%)" FAIEYLDEQLSHIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006415 (33.3%) GO:0005737 (33.3%) GO:0043023 (33.3%) translational termination (33.3%) cytoplasm (33.3%) ribosomal large subunit binding (33.3%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" NVLVCTGSETVIPPIKGLSEVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (26.7%) GO:0005737 (20%) "GO:0004148 (26.7%) GO:0050660 (26.7%)" 2-oxoglutarate metabolic process (26.7%) cytoplasm (20%) "dihydrolipoyl dehydrogenase (NADH) activity (26.7%) flavin adenine dinucleotide binding (26.7%)" "IPR004099 (12.9%) IPR006258 (12.9%) IPR012999 (12.9%)" "Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.9%) Dihydrolipoamide dehydrogenase (12.9%) Pyridine nucleotide-disulphide oxidoreductase, class I, active site (12.9%)" VNNIDRYELQAEALR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium "4.1.2.22 (66.7%) 4.1.2.9 (33.3%)" "fructose-6-phosphate phosphoketolase (66.7%) phosphoketolase (33.3%)" GO:0005975 (31%) "GO:0000287 (31%) GO:0016832 (17.2%) GO:0047905 (13.8%)" carbohydrate metabolic process (31%) "magnesium ion binding (31%) aldehyde-lyase activity (17.2%) fructose-6-phosphate phosphoketolase activity (13.8%)" "IPR005593 (14.3%) IPR009014 (14.3%) IPR018969 (14.3%)" "Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase (14.3%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (14.3%) Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal (14.3%)" TSHVEYETANR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0070125 (0.2%) GO:0006414 (0%) GO:0006790 (0%)" "GO:0005829 (15.8%) GO:0032045 (9.4%) GO:0005737 (0.5%)" "GO:0003746 (16.7%) GO:0003924 (16.6%) GO:0005525 (16.6%)" "mitochondrial translational elongation (0.2%) translational elongation (0%) sulfur compound metabolic process (0%)" "cytosol (15.8%) guanyl-nucleotide exchange factor complex (9.4%) cytoplasm (0.5%)" "translation elongation factor activity (16.7%) GTPase activity (16.6%) GTP binding (16.6%)" "IPR000795 (8.6%) IPR027417 (8.6%) IPR050055 (8.6%)" "Translational (tr)-type GTP-binding domain (8.6%) P-loop containing nucleoside triphosphate hydrolase (8.6%) Elongation factor Tu GTPase (8.6%)" VLHEEYPDINPAYDFNQIDAAPEEQQR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20%) "GO:0000287 (20%) GO:0003746 (20%) GO:0003924 (20%)" cytosol (20%) "magnesium ion binding (20%) translation elongation factor activity (20%) GTPase activity (20%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" AREPFDVEGTENECK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004818 (16.7%) GO:0005524 (16.7%)" glutamyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR000924 (10%) IPR001412 (10%) IPR004527 (10%)" "Glutamyl/glutaminyl-tRNA synthetase (10%) Aminoacyl-tRNA synthetase, class I, conserved site (10%) Glutamate-tRNA ligase, bacterial/mitochondrial (10%)" DAFNAVQDAIEKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" LFVHHIQNAENGATVEFDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (16.6%) "GO:0005840 (17.1%) GO:0005737 (16.6%) GO:1990904 (16.6%)" "GO:0003735 (16.6%) GO:0019843 (16.6%)" translation (16.6%) "ribosome (17.1%) cytoplasm (16.6%) ribonucleoprotein complex (16.6%)" "structural constituent of ribosome (16.6%) rRNA binding (16.6%)" "IPR001787 (33.3%) IPR028909 (33.3%) IPR036164 (33.3%)" "Large ribosomal subunit protein bL21 (33.3%) Large ribosomal subunit protein bL21-like (33.3%) Large ribosomal subunit protein bL21-like superfamily (33.3%)" HFAATGKPLFSSHMIDLSEESLQENIEICSK root 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006094 (19.8%) GO:0006096 (19.8%)" GO:0005829 (19.8%) "GO:0004332 (19.8%) GO:0008270 (19.8%) GO:0016829 (0.4%)" "gluconeogenesis (19.8%) glycolytic process (19.8%)" cytosol (19.8%) "fructose-bisphosphate aldolase activity (19.8%) zinc ion binding (19.8%) lyase activity (0.4%)" "IPR000771 (33.3%) IPR006411 (33.3%) IPR013785 (33.3%)" "Fructose-bisphosphate aldolase, class-II (33.3%) Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype (33.3%) Aldolase-type TIM barrel (33.3%)" DMVDGAPSTVK Pseudomonadati Bacteria Pseudomonadati GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" KFAVLKEQGLTPVLCIGETEAENEAGKTEEVCAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0019563 (16.6%)" "GO:0005829 (16.6%) GO:0016020 (0%)" "GO:0004807 (16.6%) GO:0016853 (0.3%) GO:0042802 (0%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) glycerol catabolic process (16.6%)" "cytosol (16.6%) membrane (0%)" "triose-phosphate isomerase activity (16.6%) isomerase activity (0.3%) identical protein binding (0%)" "IPR000652 (20.1%) IPR013785 (20.1%) IPR035990 (20.1%)" "Triosephosphate isomerase (20.1%) Aldolase-type TIM barrel (20.1%) Triosephosphate isomerase superfamily (20.1%)" ADLISAVAAEAGLSKVDAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0030261 (11.9%) GO:0006270 (10.4%) GO:0006351 (10.4%)" "GO:0005829 (11.9%) GO:1990103 (10.4%) GO:1990178 (10.4%)" "GO:0003677 (11.9%) GO:0030527 (11.9%) GO:0042802 (10.4%)" "chromosome condensation (11.9%) DNA replication initiation (10.4%) DNA-templated transcription (10.4%)" "cytosol (11.9%) DnaA-HU complex (10.4%) HU-DNA complex (10.4%)" "DNA binding (11.9%) structural constituent of chromatin (11.9%) identical protein binding (10.4%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" NKNPLILLESCDKQLLGQVCSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0002181 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.2%)" "GO:0003735 (24.9%) GO:0019843 (24.9%)" cytoplasmic translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.2%)" "structural constituent of ribosome (24.9%) rRNA binding (24.9%)" "IPR000702 (20%) IPR019906 (20%) IPR020040 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, bacteria (20%) Large ribosomal subunit protein uL6, alpha-beta domain (20%)" VSDYDGYNQFVVHR root "GO:0017038 (33%) GO:0051301 (32.8%) GO:0015031 (0.3%)" "GO:0042597 (33.2%) GO:0016020 (0.1%) GO:0005886 (0%)" "GO:0016787 (0%) GO:0019904 (0%) GO:0022857 (0%)" "protein import (33%) cell division (32.8%) protein transport (0.3%)" "periplasmic space (33.2%) membrane (0.1%) plasma membrane (0%)" "hydrolase activity (0%) protein domain specific binding (0%) transmembrane transporter activity (0%)" "IPR011042 (25%) IPR011659 (25%) IPR014167 (24.7%)" "Six-bladed beta-propeller, TolB-like (25%) WD40-like beta-propeller (25%) Tol-Pal system protein TolB (24.7%)" NDSPETASRPFSASR Bacteria Bacteria 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.2%) GO:0005829 (33.2%) "GO:0004315 (33.2%) GO:0016746 (0.5%)" fatty acid biosynthetic process (33.2%) cytosol (33.2%) "3-oxoacyl-[acyl-carrier-protein] synthase activity (33.2%) acyltransferase activity (0.5%)" "IPR000794 (14.7%) IPR014030 (14.7%) IPR016039 (14.7%)" "Beta-ketoacyl synthase (14.7%) Beta-ketoacyl synthase-like, N-terminal (14.7%) Thiolase-like (14.7%)" GQLIHTNALIEGLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.28 (86.8%) 1.1.1.290 (13.2%)" "D-lactate dehydrogenase (86.8%) 4-phosphoerythronate dehydrogenase (13.2%)" "GO:0008720 (49.4%) GO:0051287 (49.4%) GO:0033711 (1%)" "D-lactate dehydrogenase (NAD+) activity (49.4%) NAD binding (49.4%) 4-phosphoerythronate dehydrogenase activity (1%)" "IPR006140 (25.2%) IPR036291 (25.2%) IPR006139 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25.2%) NAD(P)-binding domain superfamily (25.2%) D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%)" AYLVNTGWNGTGK root 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.5%) "GO:0005829 (17.5%) GO:0005737 (0%)" "GO:0004612 (17.5%) GO:0005524 (17.5%) GO:0046872 (16.8%)" gluconeogenesis (17.5%) "cytosol (17.5%) cytoplasm (0%)" "phosphoenolpyruvate carboxykinase (ATP) activity (17.5%) ATP binding (17.5%) metal ion binding (16.8%)" "IPR001272 (25.4%) IPR013035 (25.4%) IPR015994 (24.6%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.4%) Phosphoenolpyruvate carboxykinase, C-terminal (25.4%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (24.6%)" QWVNMQDDYHCIYCIVDQHAITVR root "6.1.1.2 (99.3%) 3.1.3.18 (0.3%) 2.1.1.72 (0.2%)" "tryptophan--tRNA ligase (99.3%) phosphoglycolate phosphatase (0.3%) site-specific DNA-methyltransferase (adenine-specific) (0.2%)" "GO:0006436 (24.7%) GO:0005975 (0.1%) GO:0046295 (0.1%)" "GO:0005829 (24.7%) GO:0005739 (0.1%)" "GO:0004830 (24.7%) GO:0005524 (24.7%) GO:0016874 (0.3%)" "tryptophanyl-tRNA aminoacylation (24.7%) carbohydrate metabolic process (0.1%) glycolate biosynthetic process (0.1%)" "cytosol (24.7%) mitochondrion (0.1%)" "tryptophan-tRNA ligase activity (24.7%) ATP binding (24.7%) ligase activity (0.3%)" "IPR002305 (16.8%) IPR014729 (16.8%) IPR050203 (16.8%)" "Aminoacyl-tRNA synthetase, class Ic (16.8%) Rossmann-like alpha/beta/alpha sandwich fold (16.8%) Tryptophan--tRNA ligase (16.8%)" NQLCTIAAFNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" AKIAVESYDDRIDPVGACVGVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006353 (19.6%) GO:0031564 (19.6%)" GO:0005829 (19.6%) "GO:0003723 (19.6%) GO:0003700 (19.2%) GO:0003746 (2%)" "DNA-templated transcription termination (19.6%) transcription antitermination (19.6%)" cytosol (19.6%) "RNA binding (19.6%) DNA-binding transcription factor activity (19.2%) translation elongation factor activity (2%)" "IPR009019 (12.2%) IPR015946 (12.2%) IPR025249 (12.2%)" "K homology domain superfamily, prokaryotic type (12.2%) K homology domain-like, alpha/beta (12.2%) Transcription factor NusA, first KH domain (12.2%)" VVNREFLETYNNVQLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) SMMNDMGEITPEVK Parabacteroides merdae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides merdae "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" DGFIANVGDFEANPKDWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR013766 (33.3%) IPR017937 (33.3%) IPR036249 (33.3%)" "Thioredoxin domain (33.3%) Thioredoxin, conserved site (33.3%) Thioredoxin-like superfamily (33.3%)" ICGNHISGFVSIMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.8.4.3 (99.4%) 2.8.4.- (0.6%)" "tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (99.4%) Transferring alkylthio groups (0.6%)" "GO:0032259 (0.1%) GO:0035600 (0.1%)" "GO:0005829 (24.8%) GO:0016020 (0.3%)" "GO:0035597 (24.8%) GO:0046872 (24.8%) GO:0051539 (24.8%)" "methylation (0.1%) tRNA methylthiolation (0.1%)" "cytosol (24.8%) membrane (0.3%)" "tRNA-2-methylthio-N(6)-dimethylallyladenosine(37) synthase activity (24.8%) metal ion binding (24.8%) 4 iron, 4 sulfur cluster binding (24.8%)" "IPR007197 (10.7%) IPR005839 (10.7%) IPR006638 (10.7%)" "Radical SAM (10.7%) Methylthiotransferase (10.7%) Elp3/MiaA/NifB-like, radical SAM core domain (10.7%)" FCTTEGITNVIPLSDYR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" YSYDEYPGNPNGSDYSIAALASADGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.4%) GO:0006164 (0.9%)" GO:0005737 (20.3%) "GO:0004642 (20.3%) GO:0005524 (19.4%) GO:0046872 (19.4%)" "'de novo' IMP biosynthetic process (19.4%) purine nucleotide biosynthetic process (0.9%)" cytoplasm (20.3%) "phosphoribosylformylglycinamidine synthase activity (20.3%) ATP binding (19.4%) metal ion binding (19.4%)" "IPR010918 (11.3%) IPR029062 (11.3%) IPR036676 (11.3%)" "PurM-like, C-terminal domain (11.3%) Class I glutamine amidotransferase-like (11.3%) PurM-like, C-terminal domain superfamily (11.3%)" FAENEEVVVTANQFDRDLAAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (9.9%) GO:0008564 (1.2%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (9.9%) protein-exporting ATPase activity (1.2%)" "IPR000185 (8.3%) IPR011115 (8.3%) IPR014018 (8.3%)" "Protein translocase subunit SecA (8.3%) SecA DEAD-like, N-terminal (8.3%) SecA motor DEAD (8.3%)" SGVLTGLPDAYGR root 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (31.1%) GO:0005975 (0.1%) GO:0044814 (0%)" "GO:0005829 (32.2%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0008861 (32.2%) GO:0016829 (4%) GO:0016746 (0.4%)" "glucose metabolic process (31.1%) carbohydrate metabolic process (0.1%) pyruvate fermentation via PFL (0%)" "cytosol (32.2%) cytoplasm (0%) plasma membrane (0%)" "formate C-acetyltransferase activity (32.2%) lyase activity (4%) acyltransferase activity (0.4%)" "IPR004184 (20.4%) IPR050244 (20.4%) IPR005949 (19.7%)" "Pyruvate formate lyase domain (20.4%) Autonomous Glycyl Radical Cofactor (20.4%) Formate acetyltransferase (19.7%)" IVRLPLNQVGSLNK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006352 (33.3%) GO:0006355 (0.1%)" GO:1903865 (0.1%) "GO:0016987 (33%) GO:0003677 (32.9%) GO:0003700 (0.3%)" "DNA-templated transcription initiation (33.3%) regulation of DNA-templated transcription (0.1%)" sigma factor antagonist complex (0.1%) "sigma factor activity (33%) DNA binding (32.9%) DNA-binding transcription factor activity (0.3%)" "IPR014284 (10.1%) IPR050239 (10.1%) IPR000943 (10%)" "RNA polymerase sigma-70-like domain (10.1%) Sigma-70 factor family, RNA polymerase initiation factors (10.1%) RNA polymerase sigma-70 (10%)" NKLFTTYIGMGWYNTITPAVIQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.6%) "GO:0005829 (16.6%) GO:0005960 (16.6%)" "GO:0004375 (16.6%) GO:0016594 (16.6%) GO:0030170 (16.6%)" glycine decarboxylation via glycine cleavage system (16.6%) "cytosol (16.6%) glycine cleavage complex (16.6%)" "glycine dehydrogenase (decarboxylating) activity (16.6%) glycine binding (16.6%) pyridoxal phosphate binding (16.6%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" QYPAEAADLFAACEEMAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.1 (60%) 1.2.1.51 (20%) 1.2.7.- (20%)" "pyruvate synthase (60%) pyruvate dehydrogenase (NADP(+)) (20%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (11.3%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (11.3%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" IFGPVKDYECLCGK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (15.1%) GO:0006412 (0%) GO:0006352 (0%)" "GO:0000428 (15.3%) GO:0005829 (9.6%) GO:0031981 (0%)" "GO:0003677 (15.2%) GO:0003899 (15.2%) GO:0000287 (14.4%)" "DNA-templated transcription (15.1%) translation (0%) DNA-templated transcription initiation (0%)" "DNA-directed RNA polymerase complex (15.3%) cytosol (9.6%) nuclear lumen (0%)" "DNA binding (15.2%) DNA-directed RNA polymerase activity (15.2%) magnesium ion binding (14.4%)" "IPR007080 (9.3%) IPR044893 (9.2%) IPR045867 (9.2%)" "RNA polymerase Rpb1, domain 1 (9.3%) RNA polymerase Rpb1, clamp domain superfamily (9.2%) DNA-directed RNA polymerase, subunit beta-prime (9.2%)" RVIFGNLTNDIYSSGLSITTGSGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0009328 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) phenylalanine-tRNA ligase complex (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002547 (7.7%) IPR004532 (7.7%) IPR005121 (7.7%)" "tRNA-binding domain (7.7%) Phenylalanine-tRNA ligase, class IIc, beta subunit, bacterial type (7.7%) Ferrodoxin-fold anticodon-binding domain (7.7%)" IVYVSCNPATQAR root "2.1.1.190 (80.7%) 2.1.1.- (11.7%) 2.1.1.189 (7.6%)" "23S rRNA (uracil(1939)-C(5))-methyltransferase (80.7%) Methyltransferases (11.7%) 23S rRNA (uracil(747)-C(5))-methyltransferase (7.6%)" "GO:0070475 (47.2%) GO:0006396 (1.1%) GO:0032259 (0.7%)" GO:0016020 (0.1%) "GO:0070041 (47.2%) GO:0008173 (1.1%) GO:0008757 (1%)" "rRNA base methylation (47.2%) RNA processing (1.1%) methylation (0.7%)" membrane (0.1%) "rRNA (uridine-C5-)-methyltransferase activity (47.2%) RNA methyltransferase activity (1.1%) S-adenosylmethionine-dependent methyltransferase activity (1%)" "IPR010280 (17%) IPR030390 (16.9%) IPR029063 (16.8%)" "(Uracil-5)-methyltransferase family (17%) RNA methyltransferase TrmA, active site (16.9%) S-adenosyl-L-methionine-dependent methyltransferase superfamily (16.8%)" RHGFGGVGQTTHGQHNR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (24.3%) "GO:0022625 (21.6%) GO:0005840 (2.9%) GO:1990904 (2.7%)" "GO:0003735 (24.3%) GO:0019843 (24.3%)" translation (24.3%) "cytosolic large ribosomal subunit (21.6%) ribosome (2.9%) ribonucleoprotein complex (2.7%)" "structural constituent of ribosome (24.3%) rRNA binding (24.3%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" MKNLIAELLFK Pseudomonadati Bacteria Pseudomonadati "GO:0009267 (47%) GO:0016036 (0.6%) GO:0042177 (0.6%)" GO:0005737 (51.2%) GO:0043856 (0.6%) "cellular response to starvation (47%) cellular response to phosphate starvation (0.6%) negative regulation of protein catabolic process (0.6%)" cytoplasm (51.2%) anti-sigma factor antagonist activity (0.6%) IPR019732 (100%) Sigma-S stabilisation anti-adaptor protein (100%) MTNEEPVDTTQYIEVQHDGSVIEKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 7.1.1.- (100%) Hydron translocation or charge separation linked to oxidoreductase reactions (100%) "GO:0005886 (15.5%) GO:0030964 (11.9%) GO:0005737 (10.7%)" "GO:0008137 (15.5%) GO:0048038 (15.5%) GO:0050136 (15.5%)" "plasma membrane (15.5%) NADH dehydrogenase complex (11.9%) cytoplasm (10.7%)" "NADH dehydrogenase (ubiquinone) activity (15.5%) quinone binding (15.5%) NADH dehydrogenase (quinone) (non-electrogenic) activity (15.5%)" "IPR001135 (17.3%) IPR001268 (17.3%) IPR022885 (17.3%)" "NADH-quinone oxidoreductase, subunit D (17.3%) NADH:ubiquinone oxidoreductase, 30kDa subunit (17.3%) NAD(P)H-quinone oxidoreductase subunit D/H (17.3%)" RFGGLNFPITPYIMAADIVSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.99.- (100%) With other acceptors (100%) "GO:0050660 (50%) GO:0003995 (46.3%) GO:0016627 (1.9%)" "flavin adenine dinucleotide binding (50%) acyl-CoA dehydrogenase activity (46.3%) oxidoreductase activity, acting on the CH-CH group of donors (1.9%)" "IPR009100 (9.3%) IPR013786 (9.3%) IPR037069 (9.3%)" "Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily (9.3%) Acyl-CoA dehydrogenase/oxidase, N-terminal (9.3%) Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily (9.3%)" YISDSAAEEQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.2%) GO:0017038 (11.2%) GO:0043952 (11.2%)" "GO:0005829 (11.2%) GO:0005886 (11.2%) GO:0031522 (11.2%)" "GO:0005524 (11.2%) GO:0046872 (9.6%) GO:0008564 (0.5%)" "protein targeting (11.2%) protein import (11.2%) protein transport by the Sec complex (11.2%)" "cytosol (11.2%) plasma membrane (11.2%) cell envelope Sec protein transport complex (11.2%)" "ATP binding (11.2%) metal ion binding (9.6%) protein-exporting ATPase activity (0.5%)" "IPR000185 (8.4%) IPR011115 (8.4%) IPR014018 (8.4%)" "Protein translocase subunit SecA (8.4%) SecA DEAD-like, N-terminal (8.4%) SecA motor DEAD (8.4%)" KVEENNFGIR root 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.5%) GO:0017038 (11.5%) GO:0043952 (11.5%)" "GO:0005886 (11.5%) GO:0005829 (11.5%) GO:0031522 (11.5%)" "GO:0005524 (11.5%) GO:0046872 (7.8%) GO:0004386 (0.2%)" "protein targeting (11.5%) protein import (11.5%) protein transport by the Sec complex (11.5%)" "plasma membrane (11.5%) cytosol (11.5%) cell envelope Sec protein transport complex (11.5%)" "ATP binding (11.5%) metal ion binding (7.8%) helicase activity (0.2%)" "IPR000185 (8%) IPR011116 (8%) IPR014018 (7.9%)" "Protein translocase subunit SecA (8%) SecA Wing/Scaffold (8%) SecA motor DEAD (7.9%)" ELAGVTEPEKKR root 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) "GO:0005829 (32.9%) GO:0016020 (1.4%)" "GO:0003921 (32.9%) GO:0005524 (32.9%)" "cytosol (32.9%) membrane (1.4%)" "GMP synthase activity (32.9%) ATP binding (32.9%)" "IPR001674 (13.4%) IPR014729 (13.4%) IPR025777 (13.4%)" "GMP synthase, C-terminal (13.4%) Rossmann-like alpha/beta/alpha sandwich fold (13.4%) GMP synthetase ATP pyrophosphatase domain (13.4%)" TGWLDTVAVRR root 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.6%) GO:0046040 (16.6%) GO:0006164 (0%)" "GO:0005737 (16.6%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0004019 (16.6%) GO:0005525 (16.6%) GO:0000287 (15.4%)" "'de novo' AMP biosynthetic process (16.6%) IMP metabolic process (16.6%) purine nucleotide biosynthetic process (0%)" "cytoplasm (16.6%) cytosol (0%) membrane (0%)" "adenylosuccinate synthase activity (16.6%) GTP binding (16.6%) magnesium ion binding (15.4%)" "IPR001114 (14.8%) IPR027417 (14.8%) IPR042111 (14.8%)" "Adenylosuccinate synthetase (14.8%) P-loop containing nucleoside triphosphate hydrolase (14.8%) Adenylosuccinate synthetase, domain 3 (14.8%)" LQIKGGAANPSPPVGPALGSK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.2%) GO:1990904 (0.1%)" "GO:0003735 (24.9%) GO:0070180 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.2%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.9%) large ribosomal subunit rRNA binding (24.9%)" "IPR020784 (14.7%) IPR036796 (14.7%) IPR000911 (14.6%)" "Large ribosomal subunit protein uL11, N-terminal (14.7%) Large ribosomal subunit protein uL11, N-terminal domain superfamily (14.7%) Ribosomal protein uL11 (14.6%)" YGTVPHSGFGIGFER root 6.1.1.22 (100%) asparagine--tRNA ligase (100%) "GO:0006421 (20.3%) GO:0006418 (0%) GO:0006422 (0%)" "GO:0005737 (19%) GO:0005739 (0.4%)" "GO:0005524 (20.3%) GO:0004816 (20.1%) GO:0003676 (19.2%)" "asparaginyl-tRNA aminoacylation (20.3%) tRNA aminoacylation for protein translation (0%) aspartyl-tRNA aminoacylation (0%)" "cytoplasm (19%) mitochondrion (0.4%)" "ATP binding (20.3%) asparagine-tRNA ligase activity (20.1%) nucleic acid binding (19.2%)" "IPR004364 (14.6%) IPR045864 (14.6%) IPR002312 (14.4%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (14.6%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.6%) Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.4%)" DIAELTEKLEGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" YGLIDEVLTPRK Micrococcales Bacteria Bacillati Actinomycetota Actinomycetes Micrococcales 3.4.21.92 (100%) endopeptidase Clp (100%) GO:0006515 (16.7%) "GO:0005737 (16.7%) GO:0009368 (16.7%)" "GO:0004176 (16.7%) GO:0004252 (16.7%) GO:0051117 (16.7%)" protein quality control for misfolded or incompletely synthesized proteins (16.7%) "cytoplasm (16.7%) endopeptidase Clp complex (16.7%)" "ATP-dependent peptidase activity (16.7%) serine-type endopeptidase activity (16.7%) ATPase binding (16.7%)" "IPR001907 (20%) IPR018215 (20%) IPR023562 (20%)" "ATP-dependent Clp protease proteolytic subunit (20%) ClpP, Ser active site (20%) Clp protease proteolytic subunit /Translocation-enhancing protein TepA (20%)" NMAAELYKPFVIRK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) GO:0000428 (16.9%) "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (15.9%)" DNA-templated transcription (16.9%) DNA-directed RNA polymerase complex (16.9%) "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (15.9%)" "IPR000722 (9.2%) IPR006592 (9.2%) IPR007080 (9.2%)" "RNA polymerase, alpha subunit (9.2%) RNA polymerase, N-terminal (9.2%) RNA polymerase Rpb1, domain 1 (9.2%)" IISLLGDKSDYYLNHVCK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (50%) GO:0004332 (50%) glycolytic process (50%) fructose-bisphosphate aldolase activity (50%) "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" IGVIYGVGIGGIHTFEEEVANYTLNKDTVGPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" DNTTIVNGGGSKENIQER Candidatus Prevotella avicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Candidatus Prevotella avicola 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" NKVHIINLEK root "GO:0006412 (33.1%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (33.1%) GO:0005840 (0.4%) GO:0005737 (0%)" "GO:0003735 (33.2%) GO:0008270 (0%)" "translation (33.1%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (33.1%) ribosome (0.4%) cytoplasm (0%)" "structural constituent of ribosome (33.2%) zinc ion binding (0%)" "IPR001865 (25%) IPR005706 (25%) IPR023591 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25%)" CHPFFTGK root "GO:0006412 (16.9%) GO:0002181 (0%) GO:0006413 (0%)" "GO:0005840 (17%) GO:1990904 (16.9%) GO:0005737 (0%)" "GO:0003735 (16.9%) GO:0019843 (16.8%) GO:0046872 (15.5%)" "translation (16.9%) cytoplasmic translation (0%) translational initiation (0%)" "ribosome (17%) ribonucleoprotein complex (16.9%) cytoplasm (0%)" "structural constituent of ribosome (16.9%) rRNA binding (16.8%) metal ion binding (15.5%)" "IPR002150 (25.1%) IPR034704 (25%) IPR042105 (25%)" "Large ribosomal subunit protein bL31 type A/B (25.1%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%) Large ribosomal subunit protein bL31 superfamily (25%)" GLVSKEDYEVLEK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" TEWHNIVLWR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006260 (32.2%) GO:0006281 (1.7%) GO:0006310 (1.7%)" GO:0009295 (32.2%) GO:0003697 (32.2%) "DNA replication (32.2%) DNA repair (1.7%) DNA recombination (1.7%)" nucleoid (32.2%) single-stranded DNA binding (32.2%) "IPR000424 (33.3%) IPR011344 (33.3%) IPR012340 (33.3%)" "Primosome PriB/single-strand DNA-binding (33.3%) Single-stranded DNA-binding protein (33.3%) Nucleic acid-binding, OB-fold (33.3%)" QLQPSAGDYSVYQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR011990 (24.4%) IPR019734 (24.4%) IPR039565 (24.4%)" "Tetratricopeptide-like helical domain superfamily (24.4%) Tetratricopeptide repeat (24.4%) Outer membrane lipoprotein BamD-like (24.4%)" YIFVTGGVVSSLGK root 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.7%) GO:0044210 (11.5%) GO:0006241 (0.2%)" "GO:0005829 (11.7%) GO:0097268 (11%) GO:0016020 (0.4%)" "GO:0003883 (11.7%) GO:0042802 (11.7%) GO:0005524 (11.6%)" "pyrimidine nucleobase biosynthetic process (11.7%) 'de novo' CTP biosynthetic process (11.5%) CTP biosynthetic process (0.2%)" "cytosol (11.7%) cytoophidium (11%) membrane (0.4%)" "CTP synthase activity (11.7%) identical protein binding (11.7%) ATP binding (11.6%)" "IPR017456 (16.8%) IPR027417 (16.8%) IPR004468 (16.8%)" "CTP synthase, N-terminal (16.8%) P-loop containing nucleoside triphosphate hydrolase (16.8%) CTP synthase (16.8%)" KGLADTALK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.1%) GO:0006281 (0%) GO:0046677 (0%)" "GO:0000428 (16.2%) GO:0005829 (3.3%) GO:0031981 (0%)" "GO:0003677 (16.1%) GO:0003899 (16.1%) GO:0008270 (15.2%)" "DNA-templated transcription (16.1%) DNA repair (0%) response to antibiotic (0%)" "DNA-directed RNA polymerase complex (16.2%) cytosol (3.3%) nuclear lumen (0%)" "DNA binding (16.1%) DNA-directed RNA polymerase activity (16.1%) zinc ion binding (15.2%)" "IPR007081 (8.8%) IPR045867 (8.8%) IPR038120 (8.8%)" "RNA polymerase Rpb1, domain 5 (8.8%) DNA-directed RNA polymerase, subunit beta-prime (8.8%) RNA polymerase Rpb1, funnel domain superfamily (8.8%)" RVPSESAESLDELFK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 2.7.1.69 (100%) Transferred entry: 2.7.1.191, 2.7.1.192, 2.7.1.193, 2.7.1.194, 2.7.1.1952.7.1.196, 2.7.1.197, 2.7.1.198, 2.7.1.199, 2.7.1.200, 2.7.1.2012.7.1.202, 2.7.1.203, 2.7.1.204, 2.7.1.205, 2.7.1.206, 2.7.1.207 an2.7.1.208 (100%) GO:0009401 (25%) GO:0005737 (25%) "GO:0008982 (25%) GO:0016301 (25%)" phosphoenolpyruvate-dependent sugar phosphotransferase system (25%) cytoplasm (25%) "protein-N(PI)-phosphohistidine-sugar phosphotransferase activity (25%) kinase activity (25%)" "IPR004720 (33.3%) IPR018455 (33.3%) IPR036667 (33.3%)" "Phosphotransferase system, sorbose subfamily IIB component (33.3%) Phosphotransferase system, sorbose subfamily IIB component, subgroup (33.3%) Phosphotransferase system, sorbose subfamily IIB component superfamily (33.3%)" QWHINPNWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0034599 (33.3%) GO:0005737 (33.3%) GO:0016491 (33.3%) cellular response to oxidative stress (33.3%) cytoplasm (33.3%) oxidoreductase activity (33.3%) "IPR000415 (33.3%) IPR029479 (33.3%) IPR033877 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase Frm2/Hbn1-like (33.3%)" GLSMFIYDKR Pseudomonadati Bacteria Pseudomonadati "1.3.99.- (50%) 1.3.8.1 (42.1%) 1.3.8.- (7.9%)" "With other acceptors (50%) short-chain acyl-CoA dehydrogenase (42.1%) With a flavin as acceptor (7.9%)" "GO:0050660 (50%) GO:0003995 (27.6%) GO:0016627 (19.7%)" "flavin adenine dinucleotide binding (50%) acyl-CoA dehydrogenase activity (27.6%) oxidoreductase activity, acting on the CH-CH group of donors (19.7%)" "IPR006091 (9.5%) IPR009075 (9.5%) IPR052166 (9.5%)" "Acyl-CoA oxidase/dehydrogenase, middle domain (9.5%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.5%) Diverse substrate specificity acyl-CoA dehydrogenase (9.5%)" WSGVPFYIR root "1.1.1.49 (97.9%) 1.1.1.363 (2.1%)" "glucose-6-phosphate dehydrogenase (NADP(+)) (97.9%) glucose-6-phosphate dehydrogenase [NAD(P)(+)] (2.1%)" "GO:0006006 (20%) GO:0009051 (20%)" GO:0005829 (20%) "GO:0004345 (20%) GO:0050661 (20%) GO:0016491 (0%)" "glucose metabolic process (20%) pentose-phosphate shunt, oxidative branch (20%)" cytosol (20%) "glucose-6-phosphate dehydrogenase activity (20%) NADP binding (20%) oxidoreductase activity (0%)" "IPR001282 (20.5%) IPR022675 (20.5%) IPR022674 (20.3%)" "Glucose-6-phosphate dehydrogenase (20.5%) Glucose-6-phosphate dehydrogenase, C-terminal (20.5%) Glucose-6-phosphate dehydrogenase, NAD-binding (20.3%)" LGVNLEQIPVNKPR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" GO:0005737 (16.7%) "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16.7%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" cytoplasm (16.7%) "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16.7%)" "IPR002226 (12.5%) IPR010582 (12.5%) IPR011614 (12.5%)" "Catalase haem-binding site (12.5%) Catalase immune-responsive domain (12.5%) Catalase core domain (12.5%)" QSLGGLIEAYEAVAR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) "GO:0006189 (20.2%) GO:0009236 (18.4%) GO:0006164 (0.5%)" "GO:0005829 (18.7%) GO:0016020 (0.2%)" "GO:0005524 (20.7%) GO:0004639 (20.5%) GO:0016874 (0.8%)" "'de novo' IMP biosynthetic process (20.2%) cobalamin biosynthetic process (18.4%) purine nucleotide biosynthetic process (0.5%)" "cytosol (18.7%) membrane (0.2%)" "ATP binding (20.7%) phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (20.5%) ligase activity (0.8%)" "IPR028923 (21.5%) IPR018236 (20.5%) IPR050089 (19.5%)" "SAICAR synthetase/ADE2, N-terminal (21.5%) SAICAR synthetase, conserved site (20.5%) SAICAR synthetase (19.5%)" TKLENGFDLTNYDER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (32.1%) GO:1902600 (32.1%) GO:0006811 (1%)" "GO:0005524 (33.2%) GO:0016787 (1.6%)" "ATP metabolic process (32.1%) proton transmembrane transport (32.1%) monoatomic ion transport (1%)" "ATP binding (33.2%) hydrolase activity (1.6%)" "IPR000194 (20.1%) IPR022879 (20.1%) IPR027417 (20.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.1%) V-type ATP synthase regulatory subunit B/beta (20.1%) P-loop containing nucleoside triphosphate hydrolase (20.1%)" VAEFDDALMEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0032790 (20.2%) GO:0006412 (0.2%)" GO:0005737 (19.3%) "GO:0003746 (20.2%) GO:0005525 (20.2%) GO:0003924 (19.9%)" "ribosome disassembly (20.2%) translation (0.2%)" cytoplasm (19.3%) "translation elongation factor activity (20.2%) GTP binding (20.2%) GTPase activity (19.9%)" "IPR027417 (6.3%) IPR000640 (6.3%) IPR004161 (6.3%)" "P-loop containing nucleoside triphosphate hydrolase (6.3%) Elongation factor EFG, domain V-like (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" GYISPYFVTDTEK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (21%) GO:0006457 (0.3%)" "GO:0005737 (11.2%) GO:0016020 (0.2%)" "GO:0005524 (21%) GO:0140662 (21%) GO:0016853 (14.1%)" "protein refolding (21%) protein folding (0.3%)" "cytoplasm (11.2%) membrane (0.2%)" "ATP binding (21%) ATP-dependent protein folding chaperone (21%) isomerase activity (14.1%)" "IPR001844 (17.5%) IPR002423 (17.5%) IPR027409 (17.5%)" "Chaperonin Cpn60/GroEL (17.5%) Chaperonin Cpn60/GroEL/TCP-1 family (17.5%) GroEL-like apical domain superfamily (17.5%)" LVPHQEAPTNVCWGDRNR root "6.3.1.2 (80%) 6.3.1.- (20%)" "glutamine synthetase (80%) Acid--ammonia (or amine) ligases (amide synthases) (20%)" "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" YLAPDAAIAQAR root 2.5.1.15 (100%) dihydropteroate synthase (100%) "GO:0046654 (20.2%) GO:0046656 (19.4%) GO:0042558 (0.1%)" "GO:0005829 (20.2%) GO:0016020 (0.1%)" "GO:0004156 (20.2%) GO:0046872 (19.4%) GO:0016740 (0.2%)" "tetrahydrofolate biosynthetic process (20.2%) folic acid biosynthetic process (19.4%) pteridine-containing compound metabolic process (0.1%)" "cytosol (20.2%) membrane (0.1%)" "dihydropteroate synthase activity (20.2%) metal ion binding (19.4%) transferase activity (0.2%)" "IPR000489 (25.2%) IPR011005 (25.2%) IPR045031 (25%)" "Pterin-binding domain (25.2%) Dihydropteroate synthase-like superfamily (25.2%) Dihydropteroate synthase-like (25%)" QWGFENVHTVPEQMVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.- (50%) 5.4.2.2 (50%)" "Phosphotransferases (phosphomutases) (50%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (50%)" "GO:0005975 (24.1%) GO:0006166 (24.1%)" "GO:0000287 (24.1%) GO:0008973 (24.1%) GO:0004614 (3.8%)" "carbohydrate metabolic process (24.1%) purine ribonucleoside salvage (24.1%)" "magnesium ion binding (24.1%) phosphopentomutase activity (24.1%) phosphoglucomutase activity (3.8%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" DGFVMGEGAGCLILEELEHAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" LAIDDPKYNENENKIKELYEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) GLKLDAVAVSSGPGSYTGLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.234 (100%) N(6)-L-threonylcarbamoyladenine synthase (100%) "GO:0002949 (38.5%) GO:0006508 (2.6%)" GO:0005829 (38.5%) "GO:0016740 (12.8%) GO:0016746 (5.1%) GO:0008233 (2.6%)" "tRNA threonylcarbamoyladenosine modification (38.5%) proteolysis (2.6%)" cytosol (38.5%) "transferase activity (12.8%) acyltransferase activity (5.1%) peptidase activity (2.6%)" "IPR000905 (33.3%) IPR022496 (33.3%) IPR043129 (33.3%)" "Gcp-like domain (33.3%) tRNA threonylcarbamoyl adenosine modification protein TsaB (33.3%) ATPase, nucleotide binding domain (33.3%)" IEPSAEAATGCAYQAYKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) EILEGKHHDQFPVDMIQGGAGTTTNMNANEVIANR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.8%) GO:0006531 (24.8%)" GO:0005829 (24.8%) "GO:0008797 (24.8%) GO:0016853 (0.8%)" "tricarboxylic acid cycle (24.8%) aspartate metabolic process (24.8%)" cytosol (24.8%) "aspartate ammonia-lyase activity (24.8%) isomerase activity (0.8%)" "IPR000362 (13.1%) IPR008948 (13.1%) IPR018951 (13.1%)" "Fumarate lyase family (13.1%) L-Aspartase-like (13.1%) Fumarase C, C-terminal (13.1%)" NALTTLPMGGGK root "1.4.1.4 (97.1%) 1.4.1.2 (2.1%) 1.4.1.3 (0.5%)" "glutamate dehydrogenase (NADP(+)) (97.1%) glutamate dehydrogenase (2.1%) glutamate dehydrogenase [NAD(P)(+)] (0.5%)" "GO:0006537 (25.3%) GO:0016539 (0%) GO:0006536 (0%)" "GO:0005829 (25.3%) GO:0009986 (0.2%) GO:0005737 (0%)" "GO:0004354 (25.3%) GO:0000166 (23.3%) GO:0004352 (0.2%)" "glutamate biosynthetic process (25.3%) intein-mediated protein splicing (0%) glutamate metabolic process (0%)" "cytosol (25.3%) cell surface (0.2%) cytoplasm (0%)" "glutamate dehydrogenase (NADP+) activity (25.3%) nucleotide binding (23.3%) glutamate dehydrogenase (NAD+) activity (0.2%)" "IPR006097 (11.3%) IPR050724 (11.3%) IPR046346 (11.3%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.3%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.3%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.3%)" IDYTVANFDVEQGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" IKYDRTEDEEFVSFEDAVK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16%) GO:0006508 (9.9%)" GO:0000428 (16%) "GO:0003677 (16%) GO:0003899 (16%) GO:0032549 (16%)" "DNA-templated transcription (16%) proteolysis (9.9%)" DNA-directed RNA polymerase complex (16%) "DNA binding (16%) DNA-directed RNA polymerase activity (16%) ribonucleoside binding (16%)" "IPR007120 (7.3%) IPR007121 (7.3%) IPR007641 (7.3%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.3%) RNA polymerase, beta subunit, conserved site (7.3%) RNA polymerase Rpb2, domain 7 (7.3%)" SEQIPTDFYR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006353 (20%) GO:0031564 (20%)" GO:0005829 (20%) "GO:0003700 (20%) GO:0003723 (20%)" "DNA-templated transcription termination (20%) transcription antitermination (20%)" cytosol (20%) "DNA-binding transcription factor activity (20%) RNA binding (20%)" "IPR009019 (12.2%) IPR010213 (12.2%) IPR012340 (12.2%)" "K homology domain superfamily, prokaryotic type (12.2%) Transcription factor NusA (12.2%) Nucleic acid-binding, OB-fold (12.2%)" IGILSSGGDCPGINATIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (8.3%) GO:0030388 (8.3%) GO:0061621 (8.3%)" GO:0005945 (8.3%) "GO:0003872 (8.3%) GO:0005524 (8.3%) GO:0016208 (8.3%)" "fructose 6-phosphate metabolic process (8.3%) fructose 1,6-bisphosphate metabolic process (8.3%) canonical glycolysis (8.3%)" 6-phosphofructokinase complex (8.3%) "6-phosphofructokinase activity (8.3%) ATP binding (8.3%) AMP binding (8.3%)" "IPR000023 (20%) IPR012003 (20%) IPR012829 (20%)" "Phosphofructokinase domain (20%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (20%) Phosphofructokinase, mixed-substrate PFK group III (20%)" AYFGEKDFQQLAIIR Bacteria Bacteria 6.3.2.1 (100%) pantoate--beta-alanine ligase (AMP-forming) (100%) GO:0015940 (24.9%) GO:0005829 (24.9%) "GO:0004592 (24.9%) GO:0005524 (24.9%) GO:0016874 (0.2%)" pantothenate biosynthetic process (24.9%) cytosol (24.9%) "pantoate-beta-alanine ligase activity (24.9%) ATP binding (24.9%) ligase activity (0.2%)" "IPR003721 (32%) IPR014729 (32%) IPR042176 (31.9%)" "Pantoate-beta-alanine ligase (32%) Rossmann-like alpha/beta/alpha sandwich fold (32%) Pantoate-beta-alanine ligase, C-terminal domain (31.9%)" IFGGVFIIDGEEKESSLFNLIKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" AKLHDYYKDEVVK root "GO:0006412 (16.3%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (17.3%) GO:1990904 (16.2%) GO:0005829 (0.1%)" "GO:0000049 (16.6%) GO:0019843 (16.6%) GO:0003735 (16.3%)" "translation (16.3%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (17.3%) ribonucleoprotein complex (16.2%) cytosol (0.1%)" "tRNA binding (16.6%) rRNA binding (16.6%) structural constituent of ribosome (16.3%)" "IPR022803 (17.4%) IPR031310 (17.1%) IPR002132 (16.9%)" "Large ribosomal subunit protein uL5 domain superfamily (17.4%) Large ribosomal subunit protein uL5, N-terminal (17.1%) Large ribosomal subunit protein uL5 (16.9%)" NLFNWHMTQPDESILVSDGK root "GO:0042953 (33.1%) GO:0044874 (33.1%) GO:0006282 (0.1%)" "GO:0030288 (33%) GO:0005886 (0.1%) GO:0042597 (0.1%)" "GO:0005524 (0.1%) GO:0008047 (0.1%) GO:0016887 (0.1%)" "lipoprotein transport (33.1%) lipoprotein localization to outer membrane (33.1%) regulation of DNA repair (0.1%)" "outer membrane-bounded periplasmic space (33%) plasma membrane (0.1%) periplasmic space (0.1%)" "ATP binding (0.1%) enzyme activator activity (0.1%) ATP hydrolysis activity (0.1%)" "IPR004564 (33%) IPR018323 (33%) IPR029046 (32.9%)" "Outer membrane lipoprotein carrier protein LolA-like (33%) Outer membrane lipoprotein carrier protein LolA, Proteobacteria (33%) Lipoprotein localisation LolA/LolB/LppX (32.9%)" TIVSGIAKHYQPEELVGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) "GO:0005829 (16.4%) GO:0005737 (0.4%)" "GO:0000049 (16.7%) GO:0004825 (16.7%) GO:0005524 (16.7%)" methionyl-tRNA aminoacylation (16.7%) "cytosol (16.4%) cytoplasm (0.4%)" "tRNA binding (16.7%) methionine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002547 (8.4%) IPR004495 (8.4%) IPR009080 (8.4%)" "tRNA-binding domain (8.4%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.4%) Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (8.4%)" DAGIEASQIGYVNAHGTSTPAGDKAEAQAVK root 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) "GO:0006633 (30.9%) GO:0006233 (0.3%) GO:0006260 (0.3%)" "GO:0005829 (30.6%) GO:0005886 (0.3%) GO:0009360 (0.3%)" "GO:0004315 (30.9%) GO:0003677 (0.3%) GO:0003887 (0.3%)" "fatty acid biosynthetic process (30.9%) dTDP biosynthetic process (0.3%) DNA replication (0.3%)" "cytosol (30.6%) plasma membrane (0.3%) DNA polymerase III complex (0.3%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (30.9%) DNA binding (0.3%) DNA-directed DNA polymerase activity (0.3%)" "IPR000794 (14.2%) IPR014031 (14.2%) IPR016039 (14.2%)" "Beta-ketoacyl synthase (14.2%) Beta-ketoacyl synthase, C-terminal (14.2%) Thiolase-like (14.2%)" FNNNRPGNNSNGPGAPHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.3%) IPR000795 (8.3%) IPR004161 (8.3%)" "Translation initiation factor IF-2, bacterial-like (8.3%) Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" ALDNIRPSLEVR Actinomycetes Bacteria Bacillati Actinomycetota Actinomycetes GO:0006412 (20%) "GO:0015935 (20%) GO:0005840 (0.1%)" "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "small ribosomal subunit (20%) ribosome (0.1%)" "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000235 (20%) IPR005717 (20%) IPR020606 (20%)" "Small ribosomal subunit protein uS7 (20%) Small ribosomal subunit protein uS7, bacteria/organella (20%) Small ribosomal subunit protein uS7, conserved site (20%)" ICAEDTENNFMPSPGIIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "6.3.4.14 (82.5%) 6.4.1.2 (17.5%)" "biotin carboxylase (82.5%) acetyl-CoA carboxylase (17.5%)" GO:2001295 (13.9%) "GO:0005524 (24.3%) GO:0046872 (24.3%) GO:0003989 (15.7%)" malonyl-CoA biosynthetic process (13.9%) "ATP binding (24.3%) metal ion binding (24.3%) acetyl-CoA carboxylase activity (15.7%)" "IPR011764 (13.4%) IPR005479 (13.2%) IPR011761 (13.2%)" "Biotin carboxylation domain (13.4%) Carbamoyl phosphate synthase, ATP-binding domain (13.2%) ATP-grasp fold (13.2%)" VTPAHDVNDYMLGEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (20%) GO:0005829 (20%) "GO:0002161 (20%) GO:0004832 (20%) GO:0005524 (20%)" valyl-tRNA aminoacylation (20%) cytosol (20%) "aminoacyl-tRNA deacylase activity (20%) valine-tRNA ligase activity (20%) ATP binding (20%)" "IPR002303 (9.3%) IPR009008 (9.3%) IPR002300 (9.3%)" "Valine-tRNA ligase (9.3%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (9.3%) Aminoacyl-tRNA synthetase, class Ia (9.3%)" LFNHLENNQSQSNGGYPPYNVELVDENHYR root "GO:0050821 (48.3%) GO:0009408 (0.6%) GO:0017148 (0.6%)" "GO:0005737 (48.3%) GO:0005829 (0.6%)" "GO:0042802 (0.6%) GO:0042803 (0.6%) GO:0048027 (0.6%)" "protein stabilization (48.3%) response to heat (0.6%) negative regulation of translation (0.6%)" "cytoplasm (48.3%) cytosol (0.6%)" "identical protein binding (0.6%) protein homodimerization activity (0.6%) mRNA 5'-UTR binding (0.6%)" "IPR002068 (24.9%) IPR008978 (24.9%) IPR023728 (24.9%)" "Alpha crystallin/Hsp20 domain (24.9%) HSP20-like chaperone (24.9%) Small heat shock protein IbpA (24.9%)" VVITAEHMASLPNLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.29 (100%) glycerate dehydrogenase (100%) "GO:0051287 (50%) GO:0016616 (35.7%) GO:0008465 (10.7%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (35.7%) hydroxypyruvate reductase (NADH) activity (10.7%)" "IPR006139 (20%) IPR006140 (20%) IPR029753 (20%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (20%)" VVEVPASNLKK Bacteria Bacteria GO:0006412 (16.8%) "GO:0005840 (16.8%) GO:1990904 (16.8%) GO:0005737 (16.2%)" "GO:0003735 (16.8%) GO:0019843 (16.5%)" translation (16.8%) "ribosome (16.8%) ribonucleoprotein complex (16.8%) cytoplasm (16.2%)" "structural constituent of ribosome (16.8%) rRNA binding (16.5%)" "IPR000630 (35.3%) IPR035987 (35.3%) IPR047863 (29.4%)" "Small ribosomal subunit protein uS8 (35.3%) Small ribosomal subunit protein uS8 superfamily (35.3%) Small ribosomal subunit protein uS8, conserved site (29.4%)" LTADQTQYHFLSGFTAK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.9%) GO:0005829 (17.9%) "GO:0004612 (17.9%) GO:0005524 (17.9%) GO:0046872 (16.5%)" gluconeogenesis (17.9%) cytosol (17.9%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.9%) ATP binding (17.9%) metal ion binding (16.5%)" "IPR001272 (25.8%) IPR013035 (25.8%) IPR015994 (24.4%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.8%) Phosphoenolpyruvate carboxykinase, C-terminal (25.8%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (24.4%)" TGCDLLPETVGR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 4.3.3.7 (100%) 4-hydroxy-tetrahydrodipicolinate synthase (100%) "GO:0009089 (24.5%) GO:0019877 (24.5%) GO:0044281 (0.2%)" GO:0005829 (24.9%) "GO:0008840 (24.9%) GO:0016829 (0.7%) GO:0042802 (0.2%)" "lysine biosynthetic process via diaminopimelate (24.5%) diaminopimelate biosynthetic process (24.5%) small molecule metabolic process (0.2%)" cytosol (24.9%) "4-hydroxy-tetrahydrodipicolinate synthase activity (24.9%) lyase activity (0.7%) identical protein binding (0.2%)" "IPR002220 (20.3%) IPR013785 (20.3%) IPR020625 (20.2%)" "DapA-like (20.3%) Aldolase-type TIM barrel (20.3%) Schiff base-forming aldolase, active site (20.2%)" IEALENEDLAPLIDQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (83.3%) 1.2.7.- (16.7%)" "pyruvate synthase (83.3%) With an iron-sulfur protein as acceptor (16.7%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (13.1%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (13.1%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" FDFQLTPGANNGVGIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016787 (100%) hydrolase activity (100%) "IPR004155 (25%) IPR010496 (25%) IPR011989 (25%)" "PBS lyase HEAT-like repeat (25%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (25%) Armadillo-like helical (25%)" LADHSSLVGSIATMDVLVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (33.3%) "GO:0008448 (33.3%) GO:0046872 (33.3%)" N-acetylglucosamine catabolic process (33.3%) "N-acetylglucosamine-6-phosphate deacetylase activity (33.3%) metal ion binding (33.3%)" "IPR003764 (25%) IPR006680 (25%) IPR011059 (25%)" "N-acetylglucosamine-6-phosphate deacetylase (25%) Amidohydrolase-related (25%) Metal-dependent hydrolase, composite domain superfamily (25%)" MDELGFGNCTNTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.5.1 (36.5%) 1.3.99.1 (36.5%) 1.3.5.4 (27%)" "succinate dehydrogenase (36.5%) Deleted entry (36.5%) Transferred entry: 1.3.5.1 (27%)" "GO:0022904 (23.6%) GO:0009060 (23.1%) GO:0006099 (0.5%)" "GO:0009055 (23.2%) GO:0051537 (23.2%) GO:0016491 (2.9%)" "respiratory electron transport chain (23.6%) aerobic respiration (23.1%) tricarboxylic acid cycle (0.5%)" "electron transfer activity (23.2%) 2 iron, 2 sulfur cluster binding (23.2%) oxidoreductase activity (2.9%)" "IPR009051 (14.2%) IPR017896 (14.1%) IPR050573 (14%)" "Alpha-helical ferredoxin (14.2%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14.1%) Succinate Dehydrogenase/Fumarate Reductase Iron-Sulfur (14%)" LSGMNIIIDDTDHPLIIK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.4.1.21 (100%) starch synthase (100%) GO:0016020 (0.3%) "GO:0016757 (85.2%) GO:0009011 (13.5%) GO:0004373 (0.9%)" membrane (0.3%) "glycosyltransferase activity (85.2%) alpha-1,4-glucan glucosyltransferase (ADP-glucose donor) activity (13.5%) alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (0.9%)" IPR013534 (100%) Starch synthase, catalytic domain (100%) GIIDAILDGSIDKAPTK Pseudomonadati Bacteria Pseudomonadati 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.6%) GO:0005829 (17.6%) "GO:0004612 (17.6%) GO:0005524 (17.6%) GO:0046872 (16.4%)" gluconeogenesis (17.6%) cytosol (17.6%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.6%) ATP binding (17.6%) metal ion binding (16.4%)" "IPR001272 (25.7%) IPR013035 (25.7%) IPR008210 (24.3%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.7%) Phosphoenolpyruvate carboxykinase, C-terminal (25.7%) Phosphoenolpyruvate carboxykinase, N-terminal (24.3%)" FKGDDIVDTVTLTR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria GO:0043043 (32%) "GO:0005829 (33.3%) GO:0005737 (0.5%)" GO:0003746 (34.2%) peptide biosynthetic process (32%) "cytosol (33.3%) cytoplasm (0.5%)" translation elongation factor activity (34.2%) "IPR020599 (11.4%) IPR001059 (11.3%) IPR012340 (11.3%)" "Translation elongation factor P/YeiP (11.4%) Translation elongation factor P/YeiP, central (11.3%) Nucleic acid-binding, OB-fold (11.3%)" AVAFGEALEPEYK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.4%) GO:0035999 (15.4%) GO:0032259 (10.5%)" GO:0005829 (15.4%) "GO:0004372 (15.4%) GO:0030170 (15.4%) GO:0008168 (10.5%)" "glycine biosynthetic process from serine (15.4%) tetrahydrofolate interconversion (15.4%) methylation (10.5%)" cytosol (15.4%) "glycine hydroxymethyltransferase activity (15.4%) pyridoxal phosphate binding (15.4%) methyltransferase activity (10.5%)" "IPR001085 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Serine hydroxymethyltransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" TDLDKLVIEMETNGTIDPEEAIR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.6%) GO:0006352 (0%) GO:0006879 (0%)" "GO:0000428 (16.8%) GO:0005737 (16.4%) GO:0000345 (0%)" "GO:0003899 (16.6%) GO:0046983 (16.6%) GO:0003677 (16.6%)" "DNA-templated transcription (16.6%) DNA-templated transcription initiation (0%) intracellular iron ion homeostasis (0%)" "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.4%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA-directed RNA polymerase activity (16.6%) protein dimerization activity (16.6%) DNA binding (16.6%)" "IPR011263 (16.8%) IPR036603 (16.8%) IPR036643 (16.7%)" "DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) RNA polymerase, RBP11-like subunit (16.8%) DNA-directed RNA polymerase, insert domain superfamily (16.7%)" KGDSVTIGGWIGETTTIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" SIYLSSTMSAGIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006417 (16.6%) GO:0006412 (16.2%)" "GO:0015934 (16.2%) GO:0005840 (1.4%) GO:1990904 (0.9%)" "GO:0000049 (16.2%) GO:0003735 (16.2%) GO:0019843 (16.2%)" "regulation of translation (16.6%) translation (16.2%)" "large ribosomal subunit (16.2%) ribosome (1.4%) ribonucleoprotein complex (0.9%)" "tRNA binding (16.2%) structural constituent of ribosome (16.2%) rRNA binding (16.2%)" "IPR023674 (17.3%) IPR028364 (17%) IPR023673 (16.8%)" "Ribosomal protein uL1-like (17.3%) Ribosomal protein uL1/ribosomal biogenesis protein (17%) Large ribosomal subunit protein uL1, conserved site (16.8%)" MRFDVSSTALLSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.7 (100%) DNA-directed DNA polymerase (100%) GO:0006271 (16.7%) "GO:0005737 (16.7%) GO:0009360 (16.7%)" "GO:0003677 (16.7%) GO:0003887 (16.7%) GO:0008408 (16.7%)" DNA strand elongation involved in DNA replication (16.7%) "cytoplasm (16.7%) DNA polymerase III complex (16.7%)" "DNA binding (16.7%) DNA-directed DNA polymerase activity (16.7%) 3'-5' exonuclease activity (16.7%)" "IPR001001 (20%) IPR022634 (20%) IPR022635 (20%)" "DNA polymerase III, beta sliding clamp (20%) DNA polymerase III, beta sliding clamp, N-terminal (20%) DNA polymerase III, beta sliding clamp, C-terminal (20%)" AIKDVFGDHAYKLNISSTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" GIIDEVNKIASAADIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.2.2 (75%) 5.4.2.- (25%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (75%) Phosphotransferases (phosphomutases) (25%)" "GO:0005975 (24.5%) GO:0006166 (24.5%)" "GO:0000287 (24.5%) GO:0008973 (24.5%) GO:0004614 (2.1%)" "carbohydrate metabolic process (24.5%) purine ribonucleoside salvage (24.5%)" "magnesium ion binding (24.5%) phosphopentomutase activity (24.5%) phosphoglucomutase activity (2.1%)" "IPR005844 (13.5%) IPR016055 (13.5%) IPR016066 (13.5%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (13.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (13.5%) Alpha-D-phosphohexomutase, conserved site (13.5%)" AQSANFPFCTIEPNVGVITVPDER Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0005737 (20.2%) "GO:0005524 (20.2%) GO:0005525 (20.2%) GO:0016887 (20.2%)" cytoplasm (20.2%) "ATP binding (20.2%) GTP binding (20.2%) ATP hydrolysis activity (20.2%)" "IPR004396 (10%) IPR006073 (10%) IPR012675 (10%)" "Ribosome-binding ATPase YchF/Obg-like ATPase 1 (10%) GTP binding domain (10%) Beta-grasp domain superfamily (10%)" SQTVHFQGNPVTVANSIPQAGSK Bacteria Bacteria "1.11.1.24 (94.9%) 1.11.1.- (5.1%)" "thioredoxin-dependent peroxiredoxin (94.9%) Peroxidases (5.1%)" GO:0034599 (45.3%) "GO:0005829 (0.5%) GO:0042597 (0.5%)" "GO:0008379 (48.4%) GO:0004601 (4.7%) GO:0032843 (0.5%)" cellular response to oxidative stress (45.3%) "cytosol (0.5%) periplasmic space (0.5%)" "thioredoxin peroxidase activity (48.4%) peroxidase activity (4.7%) hydroperoxide reductase activity (0.5%)" "IPR036249 (17.1%) IPR050455 (17.1%) IPR013740 (17%)" "Thioredoxin-like superfamily (17.1%) Thiol Peroxidase Tpx Subfamily (17.1%) Redoxin (17%)" GTEFHPGENIGMGKDHTLFALVDGTVNFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001684 (50%) IPR018261 (50%)" "Large ribosomal subunit protein bL27 (50%) Large ribosomal subunit protein bL27, conserved site (50%)" IFADLGAWQIAQLAR root "2.1.3.15 (95.7%) 6.4.1.2 (4.3%)" "acetyl-CoA carboxytransferase (95.7%) acetyl-CoA carboxylase (4.3%)" "GO:0006633 (16.5%) GO:2001295 (16.3%) GO:0006260 (0.1%)" "GO:0009317 (16.5%) GO:0005737 (0.1%) GO:0005829 (0.1%)" "GO:0003989 (16.5%) GO:0005524 (16.5%) GO:0016743 (16.5%)" "fatty acid biosynthetic process (16.5%) malonyl-CoA biosynthetic process (16.3%) DNA replication (0.1%)" "acetyl-CoA carboxylase complex (16.5%) cytoplasm (0.1%) cytosol (0.1%)" "acetyl-CoA carboxylase activity (16.5%) ATP binding (16.5%) carboxyl- or carbamoyltransferase activity (16.5%)" "IPR001095 (33%) IPR011763 (33%) IPR029045 (33%)" "Acetyl-CoA carboxylase, alpha subunit (33%) Acetyl-coenzyme A carboxyltransferase, C-terminal (33%) ClpP/crotonase-like domain superfamily (33%)" EQLFEEETKAGLEGFEVGQQTELGAVNVMTGIYTGR Leyella stercorea Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Leyella Leyella stercorea 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (16.7%) GO:0005829 (16.7%) "GO:0004612 (16.7%) GO:0005524 (16.7%) GO:0016301 (16.7%)" gluconeogenesis (16.7%) cytosol (16.7%) "phosphoenolpyruvate carboxykinase (ATP) activity (16.7%) ATP binding (16.7%) kinase activity (16.7%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" IRVNEISIFGR Bacillota Bacteria Bacillati Bacillota "5.6.2.2 (96.2%) 5.99.1.3 (3.8%)" "DNA topoisomerase (ATP-hydrolyzing) (96.2%) Transferred entry: 5.6.2.2 (3.8%)" "GO:0006265 (13%) GO:0006261 (11.4%)" "GO:0005737 (12.4%) GO:0009330 (12.4%) GO:0005694 (11.9%)" "GO:0003677 (13%) GO:0005524 (13%) GO:0034335 (11.4%)" "DNA topological change (13%) DNA-templated DNA replication (11.4%)" "cytoplasm (12.4%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.4%) chromosome (11.9%)" "DNA binding (13%) ATP binding (13%) DNA negative supercoiling activity (11.4%)" "IPR006691 (13.2%) IPR035516 (13.2%) IPR050220 (12.7%)" "DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (13.2%) DNA gyrase/topoisomerase IV, subunit A, C-terminal (13.2%) Type II DNA Topoisomerases (12.7%)" VWYDKEAPAFGTGPQQ Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" TVFAFYGPMGAGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0002949 (21.4%) GO:0005737 (21.4%) "GO:0005524 (21.4%) GO:0046872 (21.4%) GO:0016740 (14.3%)" tRNA threonylcarbamoyladenosine modification (21.4%) cytoplasm (21.4%) "ATP binding (21.4%) metal ion binding (21.4%) transferase activity (14.3%)" "IPR003442 (50%) IPR027417 (50%)" "tRNA threonylcarbamoyl adenosine modification protein TsaE (50%) P-loop containing nucleoside triphosphate hydrolase (50%)" TKNNPIIIGEPGTGK root "GO:0034605 (20%) GO:0042026 (15.4%) GO:0006508 (2.1%)" "GO:0005737 (20%) GO:0005829 (0%)" "GO:0005524 (20%) GO:0016887 (20%) GO:0008233 (2.1%)" "cellular response to heat (20%) protein refolding (15.4%) proteolysis (2.1%)" "cytoplasm (20%) cytosol (0%)" "ATP binding (20%) ATP hydrolysis activity (20%) peptidase activity (2.1%)" "IPR050130 (8.5%) IPR003593 (8.5%) IPR003959 (8.5%)" "ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.5%) AAA+ ATPase domain (8.5%) ATPase, AAA-type, core (8.5%)" VVRFEVGEGIEKKEENFAEEVAK Peptostreptococcales Bacteria Bacillati Bacillota Clostridia Peptostreptococcales GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" LRIEDALNATR root "5.6.1.7 (99.8%) 3.2.1.39 (0.2%)" "chaperonin ATPase (99.8%) glucan endo-1,3-beta-D-glucosidase (0.2%)" "GO:0042026 (18%) GO:0006457 (0%) GO:0009408 (0%)" "GO:0005737 (12%) GO:0009507 (1.7%) GO:0009536 (0.6%)" "GO:0005524 (18%) GO:0140662 (18%) GO:0016853 (17.2%)" "protein refolding (18%) protein folding (0%) response to heat (0%)" "cytoplasm (12%) chloroplast (1.7%) plastid (0.6%)" "ATP binding (18%) ATP-dependent protein folding chaperone (18%) isomerase activity (17.2%)" "IPR001844 (16.9%) IPR002423 (16.9%) IPR027413 (16.8%)" "Chaperonin Cpn60/GroEL (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%) GroEL-like equatorial domain superfamily (16.8%)" GILASVAHTQAEYEDIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (35%) "GO:0008448 (35%) GO:0046872 (30%)" N-acetylglucosamine catabolic process (35%) "N-acetylglucosamine-6-phosphate deacetylase activity (35%) metal ion binding (30%)" "IPR003764 (25%) IPR006680 (25%) IPR011059 (25%)" "N-acetylglucosamine-6-phosphate deacetylase (25%) Amidohydrolase-related (25%) Metal-dependent hydrolase, composite domain superfamily (25%)" VYEAYKEEHIQER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.6%) GO:0044210 (11.6%)" "GO:0005829 (11.6%) GO:0097268 (9.8%)" "GO:0003883 (11.6%) GO:0005524 (11.6%) GO:0042802 (11.6%)" "pyrimidine nucleobase biosynthetic process (11.6%) 'de novo' CTP biosynthetic process (11.6%)" "cytosol (11.6%) cytoophidium (9.8%)" "CTP synthase activity (11.6%) ATP binding (11.6%) identical protein binding (11.6%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" FLKEVCLLNQEDIMDAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006414 (1.3%) GO:0005737 (49.4%) GO:0003746 (49.4%) translational elongation (1.3%) cytoplasm (49.4%) translation elongation factor activity (49.4%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" IGMVLPAQYDKDLQEEYGDAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.8%) IPR012944 (33.8%) IPR033985 (32.3%)" "Tetratricopeptide-like helical domain superfamily (33.8%) RagB/SusD domain (33.8%) SusD-like, N-terminal (32.3%)" SGVGLLTVHAPIR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "4.2.1.136 (50%) 5.1.99.6 (50%)" "ADP-dependent NAD(P)H-hydrate dehydratase (50%) NAD(P)H-hydrate epimerase (50%)" "GO:0046496 (15.3%) GO:0110051 (15.3%)" "GO:0005524 (15.3%) GO:0046872 (15.3%) GO:0052855 (15.3%)" "nicotinamide nucleotide metabolic process (15.3%) metabolite repair (15.3%)" "ATP binding (15.3%) metal ion binding (15.3%) ADP-dependent NAD(P)H-hydrate dehydratase activity (15.3%)" "IPR000631 (16.7%) IPR004443 (16.7%) IPR017953 (16.7%)" "ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase (16.7%) YjeF N-terminal domain (16.7%) Carbohydrate kinase, predicted, conserved site (16.7%)" GCCGPQSDYAVSVAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.2.1.37 (75%) 3.2.1.- (25%)" "xylan 1,4-beta-xylosidase (75%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (25%)" GO:0005975 (50%) "GO:0004553 (44.7%) GO:0009044 (5.3%)" carbohydrate metabolic process (50%) "hydrolase activity, hydrolyzing O-glycosyl compounds (44.7%) xylan 1,4-beta-xylosidase activity (5.3%)" "IPR006710 (20%) IPR013320 (20%) IPR023296 (20%)" "Glycoside hydrolase, family 43 (20%) Concanavalin A-like lectin/glucanase domain superfamily (20%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (20%)" EVCLLNQEDIMDGKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (48.1%) GO:0003746 (51.9%) cytoplasm (48.1%) translation elongation factor activity (51.9%) "IPR001816 (20.1%) IPR014039 (20.1%) IPR036402 (20.1%)" "Translation elongation factor EFTs/EF1B (20.1%) Translation elongation factor EFTs/EF1B, dimerisation (20.1%) Elongation factor Ts, dimerisation domain superfamily (20.1%)" MNPQQAQQYLQTYFVEAQAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" VLSIVVKPDAQIEYEEFGKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (20%) IPR011053 (20%) IPR022615 (20%)" "Na(+)-translocating NADH-quinone reductase subunit A (20%) Single hybrid motif (20%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (20%)" GNPTVEAEVHLEGGFVGMAAAPSGASTGSR root "4.2.1.11 (99.9%) 6.3.4.2 (0.1%)" "phosphopyruvate hydratase (99.9%) CTP synthase (glutamine hydrolyzing) (0.1%)" "GO:0006096 (16.7%) GO:0006396 (0%) GO:0006401 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.6%) GO:0009986 (16%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" "glycolytic process (16.7%) RNA processing (0%) RNA catabolic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.6%) cell surface (16%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020811 (16.8%) IPR029017 (16.8%)" "Enolase (16.8%) Enolase, N-terminal (16.8%) Enolase-like, N-terminal (16.8%)" RIIDGFGLPDFGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004839 (25%) IPR015421 (25%) IPR015424 (25%)" "Aminotransferase, class I/classII, large domain (25%) Pyridoxal phosphate-dependent transferase, major domain (25%) Pyridoxal phosphate-dependent transferase (25%)" AYFLPEGGYVVAETEEKALELAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (19.4%) GO:0005829 (19.4%) "GO:0002161 (20.4%) GO:0004832 (20.4%) GO:0005524 (20.4%)" valyl-tRNA aminoacylation (19.4%) cytosol (19.4%) "aminoacyl-tRNA deacylase activity (20.4%) valine-tRNA ligase activity (20.4%) ATP binding (20.4%)" "IPR001412 (9.1%) IPR002300 (9.1%) IPR002303 (9.1%)" "Aminoacyl-tRNA synthetase, class I, conserved site (9.1%) Aminoacyl-tRNA synthetase, class Ia (9.1%) Valine-tRNA ligase (9.1%)" ATGANAAGEALGNLYIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" DTQATFHYEPVPTSDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" IFPIESPAIDSIEVNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33%) "GO:0022625 (33%) GO:0005840 (0.3%) GO:1990904 (0.3%)" GO:0003735 (33.3%) translation (33%) "cytosolic large ribosomal subunit (33%) ribosome (0.3%) ribonucleoprotein complex (0.3%)" structural constituent of ribosome (33.3%) "IPR001857 (25%) IPR008991 (25%) IPR018257 (25%)" "Large ribosomal subunit protein bL19 (25%) Translation protein SH3-like domain superfamily (25%) Large ribosomal subunit protein bL19, conserved site (25%)" VFLAGVGALATTVEK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium IPR008769 (100%) Poly granule associated (100%) VVDKEGNLCPLADNEISFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) "GO:0004553 (43.3%) GO:0004565 (6.7%)" carbohydrate metabolic process (50%) "hydrolase activity, hydrolyzing O-glycosyl compounds (43.3%) beta-galactosidase activity (6.7%)" "IPR006101 (7.7%) IPR006102 (7.7%) IPR006103 (7.7%)" "Glycoside hydrolase, family 2 (7.7%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.7%) Glycoside hydrolase family 2, catalytic domain (7.7%)" FSNSDWSEYPLFADK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005975 (49.3%) "GO:0003824 (27.5%) GO:0016787 (23.2%)" carbohydrate metabolic process (49.3%) "catalytic activity (27.5%) hydrolase activity (23.2%)" "IPR004300 (33.3%) IPR011330 (33.3%) IPR052046 (33.3%)" "Glycoside hydrolase family 57, N-terminal domain (33.3%) Glycoside hydrolase/deacetylase, beta/alpha-barrel (33.3%) Glycosyl hydrolase family 57 (33.3%)" NEPMVIEYNCR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0006189 (20%) GO:0009113 (20%)" "GO:0004637 (20%) GO:0005524 (20%) GO:0046872 (20%)" "'de novo' IMP biosynthetic process (20%) purine nucleobase biosynthetic process (20%)" "phosphoribosylamine-glycine ligase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000115 (11.1%) IPR011054 (11.1%) IPR011761 (11.1%)" "Phosphoribosylglycinamide synthetase (11.1%) Rudiment single hybrid motif (11.1%) ATP-grasp fold (11.1%)" ETQTTENLGELR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.5 (100%) chorismate mutase (100%) GO:0046417 (48.6%) "GO:0004106 (48.6%) GO:0003849 (2.9%)" chorismate metabolic process (48.6%) "chorismate mutase activity (48.6%) 3-deoxy-7-phosphoheptulonate synthase activity (2.9%)" "IPR002701 (16.7%) IPR006218 (16.7%) IPR013785 (16.7%)" "Chorismate mutase II, prokaryotic-type (16.7%) DAHP synthetase I/KDSA (16.7%) Aldolase-type TIM barrel (16.7%)" VDDALHATR root "5.6.1.7 (98.2%) 2.7.7.49 (1.7%) 2.3.1.41 (0%)" "chaperonin ATPase (98.2%) RNA-directed DNA polymerase (1.7%) beta-ketoacyl-[acyl-carrier-protein] synthase I (0%)" "GO:0042026 (16.6%) GO:0015074 (0.3%) GO:0006310 (0.3%)" "GO:0005737 (15.9%) GO:0005739 (0%) GO:1990220 (0%)" "GO:0005524 (16.6%) GO:0140662 (16.6%) GO:0016853 (16.4%)" "protein refolding (16.6%) DNA integration (0.3%) DNA recombination (0.3%)" "cytoplasm (15.9%) mitochondrion (0%) GroEL-GroES complex (0%)" "ATP binding (16.6%) ATP-dependent protein folding chaperone (16.6%) isomerase activity (16.4%)" "IPR001844 (16.1%) IPR002423 (16.1%) IPR027409 (16%)" "Chaperonin Cpn60/GroEL (16.1%) Chaperonin Cpn60/GroEL/TCP-1 family (16.1%) GroEL-like apical domain superfamily (16%)" KSETFTTAVDNQPSVEIHILQGER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005737 (22.5%) GO:0070013 (5.6%)" "GO:0005524 (23.9%) GO:0051082 (23.9%) GO:0140662 (23.9%)" "cytoplasm (22.5%) intracellular organelle lumen (5.6%)" "ATP binding (23.9%) unfolded protein binding (23.9%) ATP-dependent protein folding chaperone (23.9%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" SGIVHTSIGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006417 (16.7%) GO:0006412 (16.4%)" "GO:0015934 (16.4%) GO:0005840 (0.8%) GO:1990904 (0.6%)" "GO:0000049 (16.4%) GO:0003735 (16.4%) GO:0019843 (16.4%)" "regulation of translation (16.7%) translation (16.4%)" "large ribosomal subunit (16.4%) ribosome (0.8%) ribonucleoprotein complex (0.6%)" "tRNA binding (16.4%) structural constituent of ribosome (16.4%) rRNA binding (16.4%)" "IPR023674 (17%) IPR028364 (16.9%) IPR023673 (16.8%)" "Ribosomal protein uL1-like (17%) Ribosomal protein uL1/ribosomal biogenesis protein (16.9%) Large ribosomal subunit protein uL1, conserved site (16.8%)" AGCFEPADQLSGPESR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0004866 (100%) endopeptidase inhibitor activity (100%) "IPR001599 (20%) IPR002890 (20%) IPR008930 (20%)" "Alpha-2-macroglobulin (20%) Macroglobulin domain (20%) Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid (20%)" MDMAVMYLEEALAHIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006415 (32.3%) GO:0006412 (1.5%)" GO:0005737 (33.1%) GO:0043023 (33.1%) "translational termination (32.3%) translation (1.5%)" cytoplasm (33.1%) ribosomal large subunit binding (33.1%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" HFNQPISGTLEIPGLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) GO:0004565 (50%) carbohydrate metabolic process (50%) beta-galactosidase activity (50%) "IPR001944 (12.5%) IPR008979 (12.5%) IPR017853 (12.5%)" "Glycoside hydrolase, family 35 (12.5%) Galactose-binding-like domain superfamily (12.5%) Glycoside hydrolase superfamily (12.5%)" ASKDFHIVAETGIHARPATLLVQTASK Streptococcaceae Bacteria Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae 2.7.11.- (100%) Protein-serine/threonine kinases (100%) GO:0009401 (40.7%) GO:0005737 (40.7%) GO:0016740 (18.6%) phosphoenolpyruvate-dependent sugar phosphotransferase system (40.7%) cytoplasm (40.7%) transferase activity (18.6%) "IPR000032 (20.1%) IPR001020 (20.1%) IPR035895 (20.1%)" "Phosphocarrier protein HPr-like (20.1%) Phosphotransferase system, HPr histidine phosphorylation site (20.1%) HPr-like superfamily (20.1%)" HLCALRDEVIAMGVLPAISEWHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (38.9%) "GO:0016615 (22.2%) GO:0016616 (22.2%) GO:0030060 (16.7%)" malate metabolic process (38.9%) "malate dehydrogenase activity (22.2%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (22.2%) L-malate dehydrogenase (NAD+) activity (16.7%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" LDKDQLIAGVQDAFADKSK root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (34.3%) GO:0042026 (0.1%)" "GO:0030313 (26.8%) GO:0042597 (4.1%) GO:0030288 (0.1%)" "GO:0003755 (34.1%) GO:0016853 (0.6%) GO:0044183 (0.1%)" "protein folding (34.3%) protein refolding (0.1%)" "cell envelope (26.8%) periplasmic space (4.1%) outer membrane-bounded periplasmic space (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (34.1%) isomerase activity (0.6%) protein folding chaperone (0.1%)" "IPR000774 (25.2%) IPR036944 (25.2%) IPR046357 (24.8%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25.2%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25.2%) Peptidyl-prolyl cis-trans isomerase domain superfamily (24.8%)" EIDPHTNYLSPR root 3.4.21.102 (100%) C-terminal processing peptidase (100%) "GO:0006508 (19.6%) GO:0007165 (19.3%) GO:0030163 (0%)" "GO:0030288 (19.2%) GO:0005886 (15%)" "GO:0004252 (12.4%) GO:0004175 (7.1%) GO:0008236 (7.1%)" "proteolysis (19.6%) signal transduction (19.3%) protein catabolic process (0%)" "outer membrane-bounded periplasmic space (19.2%) plasma membrane (15%)" "serine-type endopeptidase activity (12.4%) endopeptidase activity (7.1%) serine-type peptidase activity (7.1%)" "IPR040573 (14.5%) IPR036034 (14.5%) IPR001478 (14.4%)" "Tail specific protease, N-terminal domain (14.5%) PDZ superfamily (14.5%) PDZ domain (14.4%)" AFLPGSLVDVRPVRDTLHLEGK root "GO:0006412 (24.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.7%) GO:0005840 (0.5%) GO:1990904 (0.1%)" "GO:0003735 (24.8%) GO:0003729 (24.8%) GO:0016491 (0.1%)" "translation (24.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.7%) ribosome (0.5%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.8%) mRNA binding (24.8%) oxidoreductase activity (0.1%)" "IPR003029 (20.2%) IPR012340 (20.2%) IPR050437 (20.2%)" "S1 domain (20.2%) Nucleic acid-binding, OB-fold (20.2%) Small ribosomal subunit protein bS1-like (20.2%)" AYAVENYLQACGVKPYQFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (20%) IPR006665 (20%) IPR036737 (20%)" "Outer membrane protein, bacterial (20%) OmpA-like domain (20%) OmpA-like domain superfamily (20%)" DALLENVTVDAAGKIDFADKSVTENTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (20%) GO:0005829 (20%) "GO:0004612 (20%) GO:0005524 (20%) GO:0046872 (15%)" gluconeogenesis (20%) cytosol (20%) "phosphoenolpyruvate carboxykinase (ATP) activity (20%) ATP binding (20%) metal ion binding (15%)" "IPR001272 (26.7%) IPR013035 (26.7%) IPR015994 (26.7%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (26.7%) Phosphoenolpyruvate carboxykinase, C-terminal (26.7%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (26.7%)" VGQTKIELLEPTSEDSTIAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (47.6%) "GO:0004493 (47.6%) GO:0051213 (3.2%) GO:0016829 (1.6%)" L-methylmalonyl-CoA metabolic process (47.6%) "methylmalonyl-CoA epimerase activity (47.6%) dioxygenase activity (3.2%) lyase activity (1.6%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" EINHLLGITDNTYDPTEDFGVC Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides VVESIANQAEAVGDKFEKIEHVAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (18.8%) GO:0005737 (12.5%) "GO:0005524 (18.8%) GO:0016853 (18.8%) GO:0140662 (18.8%)" protein refolding (18.8%) cytoplasm (12.5%) "ATP binding (18.8%) isomerase activity (18.8%) ATP-dependent protein folding chaperone (18.8%)" "IPR001844 (18%) IPR002423 (18%) IPR027409 (18%)" "Chaperonin Cpn60/GroEL (18%) Chaperonin Cpn60/GroEL/TCP-1 family (18%) GroEL-like apical domain superfamily (18%)" EASMADICAAMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (8.3%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (8.3%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" AIQQQIENPLAQQILSGELVPGK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0034605 (17%) GO:0042026 (15.9%) GO:0006508 (0.1%)" "GO:0005829 (15.5%) GO:0005737 (1.5%) GO:0016020 (0%)" "GO:0005524 (17%) GO:0016887 (17%) GO:0042802 (15.5%)" "cellular response to heat (17%) protein refolding (15.9%) proteolysis (0.1%)" "cytosol (15.5%) cytoplasm (1.5%) membrane (0%)" "ATP binding (17%) ATP hydrolysis activity (17%) identical protein binding (15.5%)" "IPR019489 (8.6%) IPR027417 (8.6%) IPR050130 (8.6%)" "Clp ATPase, C-terminal (8.6%) P-loop containing nucleoside triphosphate hydrolase (8.6%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%)" SYAVSFLLQDESATLNDKQIDKIMSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0009328 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) phenylalanine-tRNA ligase complex (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002547 (7.8%) IPR004532 (7.8%) IPR005121 (7.8%)" "tRNA-binding domain (7.8%) Phenylalanine-tRNA ligase, class IIc, beta subunit, bacterial type (7.8%) Ferrodoxin-fold anticodon-binding domain (7.8%)" IVRQEDMPFLEDGTPVDICLNPLGVPSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (18.6%) GO:0006508 (3.6%)" GO:0000428 (18.6%) "GO:0003677 (18.6%) GO:0003899 (18.6%) GO:0032549 (18.6%)" "DNA-templated transcription (18.6%) proteolysis (3.6%)" DNA-directed RNA polymerase complex (18.6%) "DNA binding (18.6%) DNA-directed RNA polymerase activity (18.6%) ribonucleoside binding (18.6%)" "IPR007120 (7.6%) IPR007121 (7.6%) IPR007641 (7.6%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.6%) RNA polymerase, beta subunit, conserved site (7.6%) RNA polymerase Rpb2, domain 7 (7.6%)" DRGEDALIIYDDLSK root "7.1.2.2 (97.5%) 3.6.3.14 (2.5%)" "H(+)-transporting two-sector ATPase (97.5%) Transferred entry: 7.1.2.2 (2.5%)" "GO:0015986 (0.1%) GO:0042777 (0%)" "GO:0045259 (19.2%) GO:0005886 (18.9%) GO:0005739 (0%)" "GO:0005524 (19.2%) GO:0046933 (19.2%) GO:0043531 (19.2%)" "proton motive force-driven ATP synthesis (0.1%) proton motive force-driven plasma membrane ATP synthesis (0%)" "proton-transporting ATP synthase complex (19.2%) plasma membrane (18.9%) mitochondrion (0%)" "ATP binding (19.2%) proton-transporting ATP synthase activity, rotational mechanism (19.2%) ADP binding (19.2%)" "IPR000194 (10.2%) IPR005294 (10.2%) IPR027417 (10.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.2%) ATP synthase, F1 complex, alpha subunit (10.2%) P-loop containing nucleoside triphosphate hydrolase (10.2%)" ENILDSEVLNSSLFGDRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis HLPLPTYLVVQVR root 3.1.26.3 (100%) ribonuclease III (100%) "GO:0006364 (10.2%) GO:0006397 (10.2%) GO:0008033 (10.2%)" "GO:0005737 (10.1%) GO:0016442 (0.2%) GO:0070578 (0.2%)" "GO:0004525 (10.3%) GO:0003725 (10.2%) GO:0046872 (10.1%)" "rRNA processing (10.2%) mRNA processing (10.2%) tRNA processing (10.2%)" "cytoplasm (10.1%) RISC complex (0.2%) RISC-loading complex (0.2%)" "ribonuclease III activity (10.3%) double-stranded RNA binding (10.2%) metal ion binding (10.1%)" "IPR014720 (25.5%) IPR000999 (24.9%) IPR036389 (24.9%)" "Double-stranded RNA-binding domain (25.5%) Ribonuclease III domain (24.9%) Ribonuclease III, endonuclease domain superfamily (24.9%)" DMALSREEEINYLKEHGFEADFTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.5 (100%) argininosuccinate synthase (100%) "GO:0000050 (16.7%) GO:0000053 (16.7%) GO:0006526 (16.7%)" GO:0005737 (16.7%) "GO:0004055 (16.7%) GO:0005524 (16.7%)" "urea cycle (16.7%) argininosuccinate metabolic process (16.7%) L-arginine biosynthetic process (16.7%)" cytoplasm (16.7%) "argininosuccinate synthase activity (16.7%) ATP binding (16.7%)" "IPR001518 (14.3%) IPR014729 (14.3%) IPR018223 (14.3%)" "Argininosuccinate synthase (14.3%) Rossmann-like alpha/beta/alpha sandwich fold (14.3%) Argininosuccinate synthase, conserved site (14.3%)" DLAGFHFTGSTSTFNTLWR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (25%) GO:0009898 (25%) "GO:0003842 (25%) GO:0004657 (25%)" L-proline catabolic process to L-glutamate (25%) cytoplasmic side of plasma membrane (25%) "L-glutamate gamma-semialdehyde dehydrogenase activity (25%) proline dehydrogenase activity (25%)" "IPR005931 (14.3%) IPR015590 (14.3%) IPR016160 (14.3%)" "Delta-1-pyrroline-5-carboxylate dehydrogenase (14.3%) Aldehyde dehydrogenase domain (14.3%) Aldehyde dehydrogenase, cysteine active site (14.3%)" DVIKEPFAVINADDFYGR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0016740 (100%) transferase activity (100%) "IPR029044 (87.3%) IPR005835 (12.7%)" "Nucleotide-diphospho-sugar transferases (87.3%) Nucleotidyl transferase domain (12.7%)" FFDSNGNPLYDTDWQDEATR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR012910 (13%) IPR023996 (13%) IPR023997 (13%)" "TonB-dependent receptor, plug domain (13%) TonB-dependent outer membrane protein, SusC/RagA (13%) TonB-dependent outer membrane protein SusC/RagA, conserved site (13%)" AEANKDDLAALMITYPSTHGIFEPEIAEICK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" AIDECVKDTVEAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (19.9%) GO:0006096 (19.9%)" GO:0005829 (19.9%) "GO:0004619 (19.9%) GO:0030145 (19.9%) GO:0016853 (0.3%)" "glucose catabolic process (19.9%) glycolytic process (19.9%)" cytosol (19.9%) "phosphoglycerate mutase activity (19.9%) manganese ion binding (19.9%) isomerase activity (0.3%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" VSATGTIFGSVSNIQIAEELEKLGHKVDR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000244 (14.3%) IPR009027 (14.3%) IPR020069 (14.3%)" "Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.3%) Large ribosomal subunit protein bL9, C-terminal (14.3%)" NLLEEIQANIFKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.1%) IPR004154 (11.1%) IPR004499 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Anticodon-binding (11.1%) Proline-tRNA ligase, class IIa, archaeal-type (11.1%)" NEASEDSVWWTSEEYKNDNKPCSEEAWADLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.1%) GO:0005829 (17.1%) "GO:0004612 (17.1%) GO:0005524 (17.1%) GO:0046872 (17.1%)" gluconeogenesis (17.1%) cytosol (17.1%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.1%) ATP binding (17.1%) metal ion binding (17.1%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" VKSQAIEGLVK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.7%) GO:0051301 (12.5%) GO:0043335 (12%)" "GO:0005737 (12.4%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003755 (12.7%) GO:0043022 (12%) GO:0044183 (12%)" "protein transport (12.7%) cell division (12.5%) protein unfolding (12%)" "cytoplasm (12.4%) cytosol (0%) membrane (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.7%) ribosome binding (12%) protein folding chaperone (12%)" "IPR008880 (12.8%) IPR027304 (12.8%) IPR037041 (12.8%)" "Trigger factor, C-terminal (12.8%) Trigger factor/SurA domain superfamily (12.8%) Trigger factor, C-terminal domain superfamily (12.8%)" LTDTPAIVSTDADEMSTQMAK root "GO:0006457 (0.2%) GO:0006974 (0.2%) GO:0009408 (0.2%)" "GO:0005737 (17.9%) GO:0005829 (0.2%) GO:0005886 (0.2%)" "GO:0005524 (20%) GO:0016887 (20%) GO:0051082 (20%)" "protein folding (0.2%) DNA damage response (0.2%) response to heat (0.2%)" "cytoplasm (17.9%) cytosol (0.2%) plasma membrane (0.2%)" "ATP binding (20%) ATP hydrolysis activity (20%) unfolded protein binding (20%)" "IPR037196 (15.8%) IPR001404 (15.7%) IPR020568 (15%)" "HSP90, C-terminal domain (15.8%) Heat shock protein Hsp90 family (15.7%) Ribosomal protein uS5 domain 2-type superfamily (15%)" FSTDLPEFAAAEKEVKDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (12%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (12%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" IDVHHHPVLDDFVFLTGVTGGDVIAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0032259 (50%) GO:0003871 (50%) methylation (50%) 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity (50%) IPR038071 (100%) UROD/MetE-like superfamily (100%) IHDSAIVAAAK Bacillota Bacteria Bacillati Bacillota "GO:0034605 (19.3%) GO:0042026 (19.1%) GO:0006508 (1.9%)" GO:0005737 (19.3%) "GO:0005524 (19.3%) GO:0016887 (19.3%) GO:0008233 (1.9%)" "cellular response to heat (19.3%) protein refolding (19.1%) proteolysis (1.9%)" cytoplasm (19.3%) "ATP binding (19.3%) ATP hydrolysis activity (19.3%) peptidase activity (1.9%)" "IPR003593 (8.4%) IPR003959 (8.4%) IPR004176 (8.4%)" "AAA+ ATPase domain (8.4%) ATPase, AAA-type, core (8.4%) Clp, repeat (R) N-terminal domain (8.4%)" AIDLIDEAASSIR root "3.4.21.- (50%) 3.6.1.15 (50%)" "Serine endopeptidases (50%) nucleoside-triphosphate phosphatase (50%)" "GO:0034605 (16.9%) GO:0042026 (15.8%) GO:0006508 (1.1%)" "GO:0005829 (14.3%) GO:0005737 (2.6%) GO:0005759 (0%)" "GO:0005524 (16.9%) GO:0016887 (16.9%) GO:0042802 (14.3%)" "cellular response to heat (16.9%) protein refolding (15.8%) proteolysis (1.1%)" "cytosol (14.3%) cytoplasm (2.6%) mitochondrial matrix (0%)" "ATP binding (16.9%) ATP hydrolysis activity (16.9%) identical protein binding (14.3%)" "IPR041546 (8.6%) IPR027417 (8.6%) IPR050130 (8.6%)" "ClpA/ClpB, AAA lid domain (8.6%) P-loop containing nucleoside triphosphate hydrolase (8.6%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%)" DLVEETAAEHPFQFISGLGTTLEAFESQIVNLHK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0042026 (32.5%) GO:0005737 (32.5%) "GO:0003755 (32.5%) GO:0016853 (2.5%)" protein refolding (32.5%) cytoplasm (32.5%) "peptidyl-prolyl cis-trans isomerase activity (32.5%) isomerase activity (2.5%)" "IPR001179 (33.3%) IPR046357 (33.3%) IPR048261 (33.3%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) PPIase chaperone SlpA/SlyD-like, insertion domain superfamily (33.3%)" DALVGIALFLSHLAHEGKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.2.10 (81.9%) 5.4.2.2 (12.3%) 5.4.2.8 (5.8%)" "phosphoglucosamine mutase (81.9%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (12.3%) phosphomannomutase (5.8%)" "GO:0005975 (14.3%) GO:0006048 (13.9%) GO:0009252 (13.9%)" GO:0005829 (13.9%) "GO:0004615 (14%) GO:0008966 (14%) GO:0000287 (13.8%)" "carbohydrate metabolic process (14.3%) UDP-N-acetylglucosamine biosynthetic process (13.9%) peptidoglycan biosynthetic process (13.9%)" cytosol (13.9%) "phosphomannomutase activity (14%) phosphoglucosamine mutase activity (14%) magnesium ion binding (13.8%)" "IPR005846 (10.2%) IPR016055 (10.2%) IPR036900 (10.2%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (10.2%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (10.2%) Alpha-D-phosphohexomutase, C-terminal domain superfamily (10.2%)" FKEAGLTAILGCGFDPGVSGIYTAYAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.5.1.7 (50%) 1.5.1.43 (33.3%) 1.1.1.- (16.7%)" "saccharopine dehydrogenase (NAD(+), L-lysine-forming) (50%) carboxynorspermidine synthase (33.3%) With NAD(+) or NADP(+) as acceptor (16.7%)" "GO:0102143 (37.5%) GO:0004754 (25%) GO:0016491 (25%)" "carboxynorspermidine dehydrogenase activity (37.5%) saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (25%) oxidoreductase activity (25%)" "IPR005097 (33.6%) IPR036291 (33.6%) IPR032095 (32.9%)" "Saccharopine dehydrogenase, NADP binding domain (33.6%) NAD(P)-binding domain superfamily (33.6%) Saccharopine dehydrogenase-like, C-terminal (32.9%)" AIGDKLVCVHVNHGLMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (32.7%) "GO:0003921 (32.7%) GO:0005524 (32.7%) GO:0016740 (1%)" cytosol (32.7%) "GMP synthase activity (32.7%) ATP binding (32.7%) transferase activity (1%)" "IPR014729 (17%) IPR025777 (17%) IPR017926 (16.5%)" "Rossmann-like alpha/beta/alpha sandwich fold (17%) GMP synthetase ATP pyrophosphatase domain (17%) Glutamine amidotransferase (16.5%)" AKDKVALETLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0016884 (89.9%) GO:0016740 (10.1%)" "carbon-nitrogen ligase activity, with glutamine as amido-N-donor (89.9%) transferase activity (10.1%)" "IPR003789 (25.1%) IPR019004 (25.1%) IPR042184 (25.1%)" "Aspartyl/glutamyl-tRNA amidotransferase subunit B-like (25.1%) Uncharacterised protein YqeY/Aim41 (25.1%) YqeY/Aim41, N-terminal domain (25.1%)" NNGVPCVLYGVQKDENGLPVATHFSVPTEGLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" ARLEQLEPMEVVQYYLNR Pseudomonadati Bacteria Pseudomonadati 6.1.1.16 (100%) cysteine--tRNA ligase (100%) GO:0006423 (20.2%) GO:0005829 (20.2%) "GO:0004817 (20.2%) GO:0005524 (20.2%) GO:0008270 (18%)" cysteinyl-tRNA aminoacylation (20.2%) cytosol (20.2%) "cysteine-tRNA ligase activity (20.2%) ATP binding (20.2%) zinc ion binding (18%)" "IPR014729 (14.8%) IPR024909 (14.8%) IPR032678 (14.8%)" "Rossmann-like alpha/beta/alpha sandwich fold (14.8%) Cysteinyl-tRNA synthetase/mycothiol ligase (14.8%) tRNA synthetases class I, catalytic domain (14.8%)" GLKLEQATLEMLGTCDKVTVSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.4%) GO:0005737 (15.7%) "GO:0005524 (17.4%) GO:0140662 (17.4%) GO:0016853 (16.5%)" protein refolding (17.4%) cytoplasm (15.7%) "ATP binding (17.4%) ATP-dependent protein folding chaperone (17.4%) isomerase activity (16.5%)" "IPR001844 (16.9%) IPR002423 (16.9%) IPR018370 (16.9%)" "Chaperonin Cpn60/GroEL (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%) Chaperonin Cpn60, conserved site (16.9%)" IEAGIIHVGDEVEILGLGEDKKSVVTGVEMFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20.2%) "GO:0003746 (20.2%) GO:0003924 (20.2%) GO:0005525 (20.2%)" cytosol (20.2%) "translation elongation factor activity (20.2%) GTPase activity (20.2%) GTP binding (20.2%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" GIEDALDKGDVEGAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0017038 (50%) GO:0005886 (50%) protein import (50%) plasma membrane (50%) "IPR002898 (50%) IPR050790 (50%)" "MotA/TolQ/ExbB proton channel (50%) ExbB/TolQ Biopolymer Transport (50%)" AYLVNTGWNGSGK root 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.6%) GO:0005829 (17.6%) "GO:0004612 (17.6%) GO:0005524 (17.6%) GO:0046872 (17.1%)" gluconeogenesis (17.6%) cytosol (17.6%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.6%) ATP binding (17.6%) metal ion binding (17.1%)" "IPR001272 (25.3%) IPR013035 (25.3%) IPR008210 (24.8%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.3%) Phosphoenolpyruvate carboxykinase, C-terminal (25.3%) Phosphoenolpyruvate carboxykinase, N-terminal (24.8%)" VPLKEMSNYSTSLSSITGGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.2%) "GO:0003746 (25.2%) GO:0005525 (25.2%) GO:0003924 (24.3%)" ribosome disassembly (25.2%) "translation elongation factor activity (25.2%) GTP binding (25.2%) GTPase activity (24.3%)" "IPR000640 (7.8%) IPR005517 (7.8%) IPR014721 (7.8%)" "Elongation factor EFG, domain V-like (7.8%) Translation elongation factor EFG/EF2, domain IV (7.8%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (7.8%)" MISPLASIAPGAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.129 (100%) acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (100%) "GO:0009245 (31.4%) GO:0008610 (2%)" GO:0016020 (31.4%) "GO:0008780 (33.3%) GO:0016746 (2%)" "lipid A biosynthetic process (31.4%) lipid biosynthetic process (2%)" membrane (31.4%) "acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity (33.3%) acyltransferase activity (2%)" "IPR001451 (20%) IPR010137 (20%) IPR011004 (20%)" "Hexapeptide repeat (20%) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (20%) Trimeric LpxA-like superfamily (20%)" FICGTQDIHK root "2.3.1.29 (99.5%) 2.3.1.37 (0.2%) 2.3.1.47 (0.1%)" "glycine C-acetyltransferase (99.5%) 5-aminolevulinate synthase (0.2%) 8-amino-7-oxononanoate synthase (0.1%)" "GO:0019518 (13.8%) GO:0030148 (8.1%) GO:0006567 (3.7%)" "GO:0016020 (8.1%) GO:0005829 (7.3%) GO:0005737 (6%)" "GO:0030170 (17.9%) GO:0008890 (17.6%) GO:0016874 (7.2%)" "L-threonine catabolic process to glycine (13.8%) sphingolipid biosynthetic process (8.1%) L-threonine catabolic process (3.7%)" "membrane (8.1%) cytosol (7.3%) cytoplasm (6%)" "pyridoxal phosphate binding (17.9%) glycine C-acetyltransferase activity (17.6%) ligase activity (7.2%)" "IPR004839 (15.5%) IPR050087 (15.5%) IPR015424 (15.5%)" "Aminotransferase, class I/classII, large domain (15.5%) 8-amino-7-oxononanoate synthase class-II (15.5%) Pyridoxal phosphate-dependent transferase (15.5%)" RKDFAPFNLALSGGETAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.1.31 (100%) 6-phosphogluconolactonase (100%) "GO:0005975 (33.3%) GO:0006098 (33.3%)" GO:0017057 (33.3%) "carbohydrate metabolic process (33.3%) pentose-phosphate shunt (33.3%)" 6-phosphogluconolactonase activity (33.3%) "IPR005900 (25%) IPR006148 (25%) IPR037171 (25%)" "6-phosphogluconolactonase, DevB-type (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) NagB/RpiA transferase-like (25%)" GGAEGLNIAFLHPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (46.3%) "GO:0004493 (46.3%) GO:0051213 (4.9%) GO:0016829 (2.4%)" L-methylmalonyl-CoA metabolic process (46.3%) "methylmalonyl-CoA epimerase activity (46.3%) dioxygenase activity (4.9%) lyase activity (2.4%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" GVILSGSPYSVYDENAFKADLTEIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (12.5%) IPR004739 (12.5%) IPR014729 (12.5%)" "GMP synthase, C-terminal (12.5%) GMP synthase, glutamine amidotransferase (12.5%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" FHAGANVGCGR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006412 (21.6%) GO:1902626 (15%) GO:0000027 (0.3%)" "GO:0022625 (21.9%) GO:0005840 (2.5%) GO:0005737 (0.3%)" "GO:0003735 (21.9%) GO:0043022 (15%) GO:0000049 (0.3%)" "translation (21.6%) assembly of large subunit precursor of preribosome (15%) ribosomal large subunit assembly (0.3%)" "cytosolic large ribosomal subunit (21.9%) ribosome (2.5%) cytoplasm (0.3%)" "structural constituent of ribosome (21.9%) ribosome binding (15%) tRNA binding (0.3%)" "IPR001684 (50%) IPR018261 (50%)" "Large ribosomal subunit protein bL27 (50%) Large ribosomal subunit protein bL27, conserved site (50%)" MCASYGFDVTRPAQNAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006006 (33.3%) GO:0005829 (33.3%) GO:0008861 (33.3%) glucose metabolic process (33.3%) cytosol (33.3%) formate C-acetyltransferase activity (33.3%) "IPR001150 (20%) IPR004184 (20%) IPR005949 (20%)" "Glycine radical domain (20%) Pyruvate formate lyase domain (20%) Formate acetyltransferase (20%)" KTSDLLLDAPVPHTTGFETVYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.6%) IPR012910 (12.6%) IPR023996 (12.6%)" "TonB-dependent receptor-like, beta-barrel (12.6%) TonB-dependent receptor, plug domain (12.6%) TonB-dependent outer membrane protein, SusC/RagA (12.6%)" EGVLTDEQLEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales HGTTSIFPTLSSSTVPMIEAAAETCTR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (34.3%) "GO:0008448 (34.3%) GO:0046872 (31.4%)" N-acetylglucosamine catabolic process (34.3%) "N-acetylglucosamine-6-phosphate deacetylase activity (34.3%) metal ion binding (31.4%)" "IPR003764 (25%) IPR006680 (25%) IPR011059 (25%)" "N-acetylglucosamine-6-phosphate deacetylase (25%) Amidohydrolase-related (25%) Metal-dependent hydrolase, composite domain superfamily (25%)" MAGGVAVLYVGAPSEVEMK Pseudomonadati Bacteria Pseudomonadati 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" VVGKENLDPNGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (9.1%) IPR000795 (9.1%) IPR005225 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translational (tr)-type GTP-binding domain (9.1%) Small GTP-binding domain (9.1%)" KQIAGDGMVTGYGK Bacteria Bacteria 6.4.1.3 (100%) propionyl-CoA carboxylase (100%) GO:0015977 (20.2%) GO:0009317 (20.2%) "GO:0004658 (28.8%) GO:0003989 (20.2%) GO:0016740 (10.6%)" carbon fixation (20.2%) acetyl-CoA carboxylase complex (20.2%) "propionyl-CoA carboxylase activity (28.8%) acetyl-CoA carboxylase activity (20.2%) transferase activity (10.6%)" "IPR011762 (20.5%) IPR029045 (20.5%) IPR034733 (20.5%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20.5%) ClpP/crotonase-like domain superfamily (20.5%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.5%)" GICGTNADHLLTSVVER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.1.13 (100%) glutamate synthase (NADPH) (100%) "GO:0016740 (87.5%) GO:0004355 (12.5%)" "transferase activity (87.5%) glutamate synthase (NADPH) activity (12.5%)" IPR029044 (100%) Nucleotide-diphospho-sugar transferases (100%) TDYEKLVLEIATDGSIHPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.7%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.7%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011260 (16.7%) IPR011262 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.7%) DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" FEEVSTLITDPNVIADQKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (50%) GO:0016149 (50%) cytoplasm (50%) translation release factor activity, codon specific (50%) "IPR000352 (20%) IPR004373 (20%) IPR005139 (20%)" "Peptide chain release factor class I (20%) Peptide chain release factor 1 (20%) Peptide chain release factor (20%)" VHNNTITDVLQEYEIHPGDVFFLPAGR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (16.7%) IPR014628 (16.7%) IPR014710 (16.7%)" "RmlC-like cupin domain superfamily (16.7%) Mannose-6-phosphate isomerase, Firmicutes type, short form (16.7%) RmlC-like jelly roll fold (16.7%)" GMILCKPGQVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20.5%) "GO:0003746 (20.5%) GO:0003924 (20.5%) GO:0005525 (20.5%)" cytosol (20.5%) "translation elongation factor activity (20.5%) GTPase activity (20.5%) GTP binding (20.5%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" NLNFIEAAVEKDLAEGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (25%) GO:0005829 (25%) "GO:0004819 (25%) GO:0005524 (25%)" glutaminyl-tRNA aminoacylation (25%) cytosol (25%) "glutamine-tRNA ligase activity (25%) ATP binding (25%)" "IPR000924 (11.1%) IPR004514 (11.1%) IPR011035 (11.1%)" "Glutamyl/glutaminyl-tRNA synthetase (11.1%) Glutamine-tRNA synthetase (11.1%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (11.1%)" DALNEEGKLTLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) NKDEDEESLQALSK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium IPR025242 (100%) Protein of unknown function DUF4193 (100%) IEASSGLSDDEVKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005737 (23.4%) GO:0070013 (3.6%)" "GO:0005524 (24.3%) GO:0051082 (24.3%) GO:0140662 (24.3%)" "cytoplasm (23.4%) intracellular organelle lumen (3.6%)" "ATP binding (24.3%) unfolded protein binding (24.3%) ATP-dependent protein folding chaperone (24.3%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" QWGSPTPGHPEVNVDRGVENTSGPLGQGHTYAVGAAIAAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.2.1.1 (95.5%) 2.2.1.- (4.5%)" "transketolase (95.5%) Transketolases and transaldolases (4.5%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" TIPNLLLCPMGGKPSMK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR013766 (33.3%) IPR017937 (33.3%) IPR036249 (33.3%)" "Thioredoxin domain (33.3%) Thioredoxin, conserved site (33.3%) Thioredoxin-like superfamily (33.3%)" NSVPNDPKSPFVTSGIR root 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.1%) GO:0035999 (14.6%) GO:0032259 (11.3%)" "GO:0005829 (15.1%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0004372 (15.2%) GO:0030170 (15.1%) GO:0008168 (11.3%)" "glycine biosynthetic process from serine (15.1%) tetrahydrofolate interconversion (14.6%) methylation (11.3%)" "cytosol (15.1%) cytoplasm (0%) membrane (0%)" "glycine hydroxymethyltransferase activity (15.2%) pyridoxal phosphate binding (15.1%) methyltransferase activity (11.3%)" "IPR015422 (14.5%) IPR015424 (14.5%) IPR039429 (14.5%)" "Pyridoxal phosphate-dependent transferase, small domain (14.5%) Pyridoxal phosphate-dependent transferase (14.5%) Serine hydroxymethyltransferase-like domain (14.5%)" KNNGVPCVLYGVQKDENGLPVATHFSVPTEGLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" MLDEYLTLLEEAKKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.5%) GO:0005737 (16.5%) "GO:0000049 (16.5%) GO:0004829 (16.5%) GO:0005524 (16.5%)" threonyl-tRNA aminoacylation (16.5%) cytoplasm (16.5%) "tRNA binding (16.5%) threonine-tRNA ligase activity (16.5%) ATP binding (16.5%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" AQLLDAVKDANAIIIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.95 (70.6%) 1.1.1.290 (17.6%) 1.1.1.81 (11.8%)" "phosphoglycerate dehydrogenase (70.6%) 4-phosphoerythronate dehydrogenase (17.6%) hydroxypyruvate reductase (11.8%)" GO:0006564 (0.6%) "GO:0051287 (47.5%) GO:0016616 (37%) GO:0004617 (8%)" L-serine biosynthetic process (0.6%) "NAD binding (47.5%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (37%) phosphoglycerate dehydrogenase activity (8%)" "IPR006140 (33.5%) IPR036291 (33.5%) IPR006139 (33%)" "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.5%) NAD(P)-binding domain superfamily (33.5%) D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33%)" MLLDEGSFEEMDMFVEHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.-.-.- (100%) Ligases (100%) GO:0015977 (22.4%) GO:0009317 (22.4%) "GO:0004658 (22.8%) GO:0003989 (22.4%) GO:0016740 (9.6%)" carbon fixation (22.4%) acetyl-CoA carboxylase complex (22.4%) "propionyl-CoA carboxylase activity (22.8%) acetyl-CoA carboxylase activity (22.4%) transferase activity (9.6%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" NMSLDDIVTYVAGIVAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" VLPNGTLQTLNFER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR002931 (33.9%) IPR038765 (33.9%) IPR008969 (32.3%)" "Transglutaminase-like (33.9%) Papain-like cysteine peptidase superfamily (33.9%) Carboxypeptidase-like, regulatory domain superfamily (32.3%)" RPIGSFIFLGTTGVGK root 6.1.1.7 (100%) alanine--tRNA ligase (100%) "GO:0034605 (18.3%) GO:0042026 (17.5%) GO:0006508 (4.1%)" GO:0005737 (18.3%) "GO:0005524 (18.3%) GO:0016887 (18.3%) GO:0008233 (4.1%)" "cellular response to heat (18.3%) protein refolding (17.5%) proteolysis (4.1%)" cytoplasm (18.3%) "ATP binding (18.3%) ATP hydrolysis activity (18.3%) peptidase activity (4.1%)" "IPR003959 (8.4%) IPR050130 (8.4%) IPR001270 (8.3%)" "ATPase, AAA-type, core (8.4%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.4%) ClpA/B family (8.3%)" EIIGAEYKVEGDLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.9%) "GO:0005829 (16.9%) GO:0015935 (16.9%) GO:0005840 (0.2%)" "GO:0003735 (16.9%) GO:0019843 (16.7%) GO:0000049 (15.5%)" translation (16.9%) "cytosol (16.9%) small ribosomal subunit (16.9%) ribosome (0.2%)" "structural constituent of ribosome (16.9%) rRNA binding (16.7%) tRNA binding (15.5%)" "IPR001892 (20.4%) IPR010979 (20.2%) IPR027437 (20.2%)" "Small ribosomal subunit protein uS13 (20.4%) Small ribosomal subunit protein uS13-like, H2TH (20.2%) Small ribosomal subunit protein uS13, C-terminal (20.2%)" IQELTDKIYKEGVEKGNEEAGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GIDKAMLDLDGTPTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (17%) IPR020809 (17%) IPR020810 (17%)" "Enolase (17%) Enolase, conserved site (17%) Enolase, C-terminal TIM barrel domain (17%)" EAVAVPSTVHCDHLIQAYR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" VVMTADAVKQVEEMLA root "GO:0006412 (19.9%) GO:0006353 (0.2%) GO:0006417 (0.1%)" "GO:0005840 (20.2%) GO:1990904 (19.8%) GO:0022625 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.5%) GO:0001070 (0%)" "translation (19.9%) DNA-templated transcription termination (0.2%) regulation of translation (0.1%)" "ribosome (20.2%) ribonucleoprotein complex (19.8%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.5%) RNA-binding transcription regulator activity (0%)" "IPR002136 (33.2%) IPR023574 (33.2%) IPR013005 (33%)" "Large ribosomal subunit protein uL4 (33.2%) Large ribosomal subunit protein uL4 domain superfamily (33.2%) Large ribosomal subunit protein uL4-like (33%)" QKETKAPIKNEANNGLK Hafniaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Hafniaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (31.6%) GO:0005737 (26.3%) "GO:0003755 (31.6%) GO:0016853 (10.5%)" protein folding (31.6%) cytoplasm (26.3%) "peptidyl-prolyl cis-trans isomerase activity (31.6%) isomerase activity (10.5%)" "IPR002130 (20%) IPR020892 (20%) IPR024936 (20%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (20%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (20%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase (20%)" VVYTELVPEITQEPNYEAALK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" SQVSTEFIPTR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006777 (33.3%) GO:0034214 (0.3%)" GO:0005829 (33.3%) "GO:0005525 (31.8%) GO:0016779 (0.6%) GO:0016829 (0.3%)" "Mo-molybdopterin cofactor biosynthetic process (33.3%) protein hexamerization (0.3%)" cytosol (33.3%) "GTP binding (31.8%) nucleotidyltransferase activity (0.6%) lyase activity (0.3%)" "IPR012245 (20.4%) IPR036425 (20.4%) IPR001453 (20%)" "Molybdenum cofactor biosynthesis protein MoaB (20.4%) MoaB/Mog-like domain superfamily (20.4%) MoaB/Mog domain (20%)" ATVDSPMHLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" YNMTPLQAMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR006311 (20%) IPR013022 (20%) IPR019546 (20%)" "Twin-arginine translocation pathway, signal sequence (20%) Xylose isomerase-like, TIM barrel domain (20%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (20%)" GYMQTPCHSPWR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.22 (100%) alpha-galactosidase (100%) "GO:0030246 (63%) GO:0016787 (34.8%) GO:0004557 (2.2%)" "carbohydrate binding (63%) hydrolase activity (34.8%) alpha-galactosidase activity (2.2%)" "IPR013785 (13.9%) IPR014718 (13.9%) IPR017853 (13.9%)" "Aldolase-type TIM barrel (13.9%) Glycoside hydrolase-type carbohydrate-binding (13.9%) Glycoside hydrolase superfamily (13.9%)" LYLNAETYVGQNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" GLVCTDLKNNDEVIATLYER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0000287 (16.4%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) magnesium ion binding (16.4%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" AIASHCVMSDPASFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" TNVHGAQNVINAALR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.115 (100%) UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (100%) GO:0016829 (100%) lyase activity (100%) "IPR003869 (25%) IPR020025 (25%) IPR036291 (25%)" "Polysaccharide biosynthesis protein, CapD-like domain (25%) UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (25%) NAD(P)-binding domain superfamily (25%)" AAIEYAIANDRDSVTLVHK root 1.1.1.42 (100%) isocitrate dehydrogenase (NADP(+)) (100%) "GO:0006099 (21.1%) GO:0006097 (18.3%) GO:0006979 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004450 (21.1%) GO:0000287 (18%) GO:0051287 (18%)" "tricarboxylic acid cycle (21.1%) glyoxylate cycle (18.3%) response to oxidative stress (0%)" "cytoplasm (0%) cytosol (0%)" "isocitrate dehydrogenase (NADP+) activity (21.1%) magnesium ion binding (18%) NAD binding (18%)" "IPR004439 (35%) IPR024084 (35%) IPR019818 (30%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (35%) Isopropylmalate dehydrogenase-like domain (35%) Isocitrate/isopropylmalate dehydrogenase, conserved site (30%)" VLNNEIILVTCGSAFK Pseudomonadati Bacteria Pseudomonadati 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0032790 (17.1%) GO:0006412 (0%) GO:0006414 (0%)" "GO:0005737 (15.7%) GO:0005829 (0%)" "GO:0003746 (17.4%) GO:0005525 (17.1%) GO:0003924 (16.5%)" "ribosome disassembly (17.1%) translation (0%) translational elongation (0%)" "cytoplasm (15.7%) cytosol (0%)" "translation elongation factor activity (17.4%) GTP binding (17.1%) GTPase activity (16.5%)" "IPR027417 (6.6%) IPR009000 (6.5%) IPR000795 (6.3%)" "P-loop containing nucleoside triphosphate hydrolase (6.6%) Translation protein, beta-barrel domain superfamily (6.5%) Translational (tr)-type GTP-binding domain (6.3%)" LSPSATLAMSQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.6.1.- (98.9%) 2.6.1.1 (1.1%)" "Transaminases (98.9%) aspartate transaminase (1.1%)" GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" ALSNPDLYEGDGELRVR root "GO:0006457 (0.1%) GO:0006974 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (19.6%) GO:0005829 (0.1%) GO:0005886 (0%)" "GO:0005524 (20%) GO:0016887 (20%) GO:0051082 (20%)" "protein folding (0.1%) DNA damage response (0.1%) response to heat (0.1%)" "cytoplasm (19.6%) cytosol (0.1%) plasma membrane (0%)" "ATP binding (20%) ATP hydrolysis activity (20%) unfolded protein binding (20%)" "IPR001404 (14.5%) IPR019805 (14.5%) IPR020575 (14.5%)" "Heat shock protein Hsp90 family (14.5%) Heat shock protein Hsp90, conserved site (14.5%) Heat shock protein Hsp90, N-terminal (14.5%)" TGNRHDLAVEPPAPTVLQK root 5.4.2.7 (100%) phosphopentomutase (100%) "GO:0043094 (13%) GO:0009117 (12.9%) GO:0006018 (12.2%)" GO:0005829 (13%) "GO:0000287 (13%) GO:0008973 (13%) GO:0030145 (12.2%)" "metabolic compound salvage (13%) nucleotide metabolic process (12.9%) 2-deoxyribose 1-phosphate catabolic process (12.2%)" cytosol (13%) "magnesium ion binding (13%) phosphopentomutase activity (13%) manganese ion binding (12.2%)" "IPR010045 (25.1%) IPR024052 (25%) IPR017850 (25%)" "Phosphopentomutase (25.1%) Phosphopentomutase DeoB cap domain superfamily (25%) Alkaline-phosphatase-like, core domain superfamily (25%)" FEATKVETPAPVQTPAPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.3%) GO:0005829 (14.3%) "GO:0003723 (14.3%) GO:0004386 (14.3%) GO:0005524 (14.3%)" DNA-templated transcription termination (14.3%) cytosol (14.3%) "RNA binding (14.3%) helicase activity (14.3%) ATP binding (14.3%)" "IPR000194 (10.1%) IPR003593 (10.1%) IPR004665 (10.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%) AAA+ ATPase domain (10.1%) Transcription termination factor Rho (10.1%)" DGVHPTLEGYK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.1.1.1 (100%) carboxylesterase (100%) "GO:0004622 (86.1%) GO:0106435 (8.3%) GO:0016779 (5.6%)" "phosphatidylcholine lysophospholipase activity (86.1%) carboxylesterase activity (8.3%) nucleotidyltransferase activity (5.6%)" "IPR013830 (33.3%) IPR036514 (33.3%) IPR051532 (33.3%)" "SGNH hydrolase-type esterase domain (33.3%) SGNH hydrolase superfamily (33.3%) Diverse Ester Hydrolysis Enzymes (33.3%)" FMSSIEAALEKGDVEAAKDIAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0017038 (50%) GO:0005886 (50%) protein import (50%) plasma membrane (50%) "IPR002898 (50%) IPR050790 (50%)" "MotA/TolQ/ExbB proton channel (50%) ExbB/TolQ Biopolymer Transport (50%)" THLTEDVINAAEK root "1.1.1.95 (52.3%) 1.1.1.399 (47.7%)" "phosphoglycerate dehydrogenase (52.3%) 2-oxoglutarate reductase (47.7%)" "GO:0006564 (17.7%) GO:0009070 (1.4%)" GO:0005829 (18.7%) "GO:0051287 (20.9%) GO:0004617 (19.9%) GO:0047545 (18.5%)" "L-serine biosynthetic process (17.7%) serine family amino acid biosynthetic process (1.4%)" cytosol (18.7%) "NAD binding (20.9%) phosphoglycerate dehydrogenase activity (19.9%) (S)-2-hydroxyglutarate dehydrogenase activity (18.5%)" "IPR006139 (12%) IPR050223 (11.5%) IPR029752 (11.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (12%) D-isomer specific 2-hydroxyacid dehydrogenase (11.5%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 (11.3%)" QGFSEEDVKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.1.3.1 (50%) 4.1.1.3 (50%)" "methylmalonyl-CoA carboxytransferase (50%) Transferred entry: 4.1.1.112 and 7.2.4.2 (50%)" "GO:0003824 (88.9%) GO:0047154 (7.4%) GO:0016829 (3.7%)" "catalytic activity (88.9%) methylmalonyl-CoA carboxytransferase activity (7.4%) lyase activity (3.7%)" "IPR050709 (24.8%) IPR000891 (23.9%) IPR003379 (23.9%)" "Biotin Carboxyl Carrier/Decarboxylase Components (24.8%) Pyruvate carboxyltransferase (23.9%) Carboxylase, conserved domain (23.9%)" ILFDKGYILNFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.9%) "GO:0005840 (16.9%) GO:1990904 (16.9%) GO:0005737 (16.1%)" "GO:0003735 (16.9%) GO:0019843 (16.1%)" translation (16.9%) "ribosome (16.9%) ribonucleoprotein complex (16.9%) cytoplasm (16.1%)" "structural constituent of ribosome (16.9%) rRNA binding (16.1%)" "IPR000630 (37.5%) IPR035987 (37.5%) IPR047863 (25%)" "Small ribosomal subunit protein uS8 (37.5%) Small ribosomal subunit protein uS8 superfamily (37.5%) Small ribosomal subunit protein uS8, conserved site (25%)" KMLDASHVVVFCAK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "1.5.1.34 (69.4%) 1.-.-.- (30.6%)" "6,7-dihydropteridine reductase (69.4%) Oxidoreductases (30.6%)" GO:0046256 (28.1%) "GO:0005829 (28.1%) GO:0016020 (0%)" "GO:0046857 (28%) GO:0004155 (15.4%) GO:0016491 (0.3%)" 2,4,6-trinitrotoluene catabolic process (28.1%) "cytosol (28.1%) membrane (0%)" "oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor (28%) 6,7-dihydropteridine reductase activity (15.4%) oxidoreductase activity (0.3%)" "IPR000415 (25.2%) IPR029479 (25.2%) IPR050627 (24.9%)" "Nitroreductase-like (25.2%) Nitroreductase (25.2%) Nitroreductase/BluB (24.9%)" YREQKQDLNDPNQQAAAQQDTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (0.8%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (0.8%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" SREQFELSSYKR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (19.9%) GO:0015935 (0.1%)" "GO:0003735 (20%) GO:0000049 (19.1%) GO:0003723 (0.9%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (19.9%) small ribosomal subunit (0.1%)" "structural constituent of ribosome (20%) tRNA binding (19.1%) RNA binding (0.9%)" "IPR001848 (25%) IPR027486 (25%) IPR036838 (25%)" "Small ribosomal subunit protein uS10 (25%) Small ribosomal subunit protein uS10 domain (25%) Small ribosomal subunit protein uS10 domain superfamily (25%)" IVEPDRIFTFR Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.4.1.4 (80.6%) 1.4.1.2 (16.1%) 1.4.1.- (3.2%)" "glutamate dehydrogenase (NADP(+)) (80.6%) glutamate dehydrogenase (16.1%) With NAD(+) or NADP(+) as acceptor (3.2%)" GO:0006537 (25.5%) "GO:0005829 (25.5%) GO:0009986 (1%)" "GO:0004354 (25.5%) GO:0000166 (21.1%) GO:0004352 (1.2%)" glutamate biosynthetic process (25.5%) "cytosol (25.5%) cell surface (1%)" "glutamate dehydrogenase (NADP+) activity (25.5%) nucleotide binding (21.1%) glutamate dehydrogenase (NAD+) activity (1.2%)" "IPR006097 (11.6%) IPR046346 (11.6%) IPR050724 (11.6%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.6%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.6%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.6%)" KVVISAPATGDLK Bacteria Bacteria "1.2.1.- (94.3%) 1.2.1.12 (5.7%)" "With NAD(+) or NADP(+) as acceptor (94.3%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (5.7%)" GO:0006006 (25%) "GO:0050661 (25%) GO:0051287 (25%) GO:0016620 (24.2%)" glucose metabolic process (25%) "NADP binding (25%) NAD binding (25%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (24.2%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" AYEDAETVTGVINGK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (24.7%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.7%) GO:0005840 (0.5%) GO:0005737 (0%)" "GO:0003729 (24.7%) GO:0003735 (24.7%) GO:0016491 (0.1%)" "translation (24.7%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.7%) ribosome (0.5%) cytoplasm (0%)" "mRNA binding (24.7%) structural constituent of ribosome (24.7%) oxidoreductase activity (0.1%)" "IPR012340 (20.2%) IPR035104 (20.2%) IPR003029 (20.2%)" "Nucleic acid-binding, OB-fold (20.2%) Ribosomal protein S1-like (20.2%) S1 domain (20.2%)" SAFNFIHACTPIMMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) "GO:0006633 (31%) GO:0030497 (1.6%) GO:0006629 (0.3%)" "GO:0004316 (33.3%) GO:0051287 (32.4%) GO:0048038 (0.7%)" "fatty acid biosynthetic process (31%) fatty acid elongation (1.6%) lipid metabolic process (0.3%)" "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33.3%) NAD binding (32.4%) quinone binding (0.7%)" "IPR002347 (17.1%) IPR020904 (16.9%) IPR036291 (16.9%)" "Short-chain dehydrogenase/reductase SDR (17.1%) Short-chain dehydrogenase/reductase, conserved site (16.9%) NAD(P)-binding domain superfamily (16.9%)" SNIQDKDIILR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR011990 (50.5%) IPR019734 (45.9%) IPR013105 (1.8%)" "Tetratricopeptide-like helical domain superfamily (50.5%) Tetratricopeptide repeat (45.9%) Tetratricopeptide repeat 2 (1.8%)" IIVDKVILAAQAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (14.3%) GO:0006261 (10.3%)" "GO:0005694 (10.7%) GO:0005737 (10.7%)" "GO:0003677 (14.3%) GO:0005524 (14.3%) GO:0034335 (10.7%)" "DNA topological change (14.3%) DNA-templated DNA replication (10.3%)" "chromosome (10.7%) cytoplasm (10.7%)" "DNA binding (14.3%) ATP binding (14.3%) DNA negative supercoiling activity (10.7%)" "IPR000565 (7.9%) IPR001241 (7.9%) IPR006171 (7.9%)" "DNA topoisomerase, type IIA, subunit B (7.9%) DNA topoisomerase, type IIA (7.9%) TOPRIM domain (7.9%)" LKELGFKEEALGHNAIAAGFQGQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR004216 (11.2%) IPR005763 (11.2%) IPR009015 (11.2%)" "L-fucose/L-arabinose isomerase, C-terminal (11.2%) L-fucose isomerase (11.2%) L-fucose isomerase, N-terminal/central domain superfamily (11.2%)" IGMDIVNMIWDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11%)" "GO:0005886 (11.1%) GO:0031522 (11%) GO:0005829 (10.9%)" "GO:0005524 (11.1%) GO:0046872 (11%) GO:0004386 (0.4%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11%)" "plasma membrane (11.1%) cell envelope Sec protein transport complex (11%) cytosol (10.9%)" "ATP binding (11.1%) metal ion binding (11%) helicase activity (0.4%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR011116 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SecA Wing/Scaffold (7.7%)" VTMQNLNDR Craniata Eukaryota Metazoa Chordata Craniata "GO:0045109 (17.5%) GO:0030855 (16.6%) GO:0031069 (3.9%)" "GO:0005882 (15.2%) GO:0045095 (4.9%) GO:0005737 (4.6%)" "GO:0005198 (17.6%) GO:0030280 (2%) GO:0046982 (1.2%)" "intermediate filament organization (17.5%) epithelial cell differentiation (16.6%) hair follicle morphogenesis (3.9%)" "intermediate filament (15.2%) keratin filament (4.9%) cytoplasm (4.6%)" "structural molecule activity (17.6%) structural constituent of skin epidermis (2%) protein heterodimerization activity (1.2%)" "IPR002957 (40.3%) IPR039008 (40.3%) IPR018039 (18.6%)" "Keratin, type I (40.3%) Intermediate filament, rod domain (40.3%) Intermediate filament protein, conserved site (18.6%)" AQETAIECKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009117 (50%) GO:0003824 (50%) nucleotide metabolic process (50%) catalytic activity (50%) "IPR001310 (33.3%) IPR011146 (33.3%) IPR036265 (33.3%)" "Histidine triad (HIT) protein (33.3%) HIT-like domain (33.3%) HIT-like superfamily (33.3%)" NLNPDDFETVSVLK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0044718 (5.1%) GO:0006826 (0.9%)" GO:0009279 (85.5%) "GO:0015344 (6.8%) GO:0004180 (1.7%)" "siderophore transmembrane transport (5.1%) iron ion transport (0.9%)" cell outer membrane (85.5%) "siderophore uptake transmembrane transporter activity (6.8%) carboxypeptidase activity (1.7%)" "IPR012910 (14.1%) IPR039426 (14.1%) IPR037066 (14%)" "TonB-dependent receptor, plug domain (14.1%) TonB-dependent receptor-like (14.1%) TonB-dependent receptor, plug domain superfamily (14%)" IRRDDEVIVLTGK root "GO:0006412 (16.7%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (17%) GO:1990904 (16.6%) GO:0005829 (16%)" "GO:0003735 (16.7%) GO:0019843 (16.5%) GO:0003723 (0.2%)" "translation (16.7%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (17%) ribonucleoprotein complex (16.6%) cytosol (16%)" "structural constituent of ribosome (16.7%) rRNA binding (16.5%) RNA binding (0.2%)" "IPR008991 (14.5%) IPR014722 (14.5%) IPR005824 (14.4%)" "Translation protein SH3-like domain superfamily (14.5%) Large ribosomal subunit protein uL2, domain 2 (14.5%) KOW (14.4%)" GLDVKDLEHPIEVPVGK root "7.1.2.2 (95.8%) 3.6.3.14 (4.2%)" "H(+)-transporting two-sector ATPase (95.8%) Transferred entry: 7.1.2.2 (4.2%)" GO:0042777 (0%) "GO:0045259 (23.9%) GO:0005886 (22.9%) GO:0016020 (0%)" "GO:0005524 (23.9%) GO:0046933 (23.9%) GO:0016787 (3.4%)" proton motive force-driven plasma membrane ATP synthesis (0%) "proton-transporting ATP synthase complex (23.9%) plasma membrane (22.9%) membrane (0%)" "ATP binding (23.9%) proton-transporting ATP synthase activity, rotational mechanism (23.9%) hydrolase activity (3.4%)" "IPR050053 (11.4%) IPR027417 (11.4%) IPR000194 (11.2%)" "ATPase alpha/beta chains (11.4%) P-loop containing nucleoside triphosphate hydrolase (11.4%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11.2%)" GELPLDNLCIATPDVGGTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" GKSGAEEIEAMMKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (24.5%) GO:0006166 (24.5%)" "GO:0008973 (24.5%) GO:0000287 (22.6%) GO:0004614 (3.8%)" "carbohydrate metabolic process (24.5%) purine ribonucleoside salvage (24.5%)" "phosphopentomutase activity (24.5%) magnesium ion binding (22.6%) phosphoglucomutase activity (3.8%)" "IPR005843 (13%) IPR005846 (13%) IPR016055 (13%)" "Alpha-D-phosphohexomutase, C-terminal (13%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (13%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (13%)" KYNASVMVDEAHGIGVFGDHGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.50 (100%) serine C-palmitoyltransferase (100%) GO:0030148 (24.2%) GO:0016020 (24.2%) "GO:0030170 (24.2%) GO:0008483 (15.2%) GO:0016740 (6.1%)" sphingolipid biosynthetic process (24.2%) membrane (24.2%) "pyridoxal phosphate binding (24.2%) transaminase activity (15.2%) transferase activity (6.1%)" "IPR001917 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class-II, pyridoxal-phosphate binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" ISNIREMLPVLEAVAK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.5%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (17.1%) GO:1990220 (0%) GO:0005829 (0%)" "GO:0140662 (17.5%) GO:0005524 (17.4%) GO:0016853 (17.3%)" "protein refolding (17.5%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (17.1%) GroEL-GroES complex (0%) cytosol (0%)" "ATP-dependent protein folding chaperone (17.5%) ATP binding (17.4%) isomerase activity (17.3%)" "IPR001844 (17.9%) IPR027409 (17.9%) IPR002423 (16.8%)" "Chaperonin Cpn60/GroEL (17.9%) GroEL-like apical domain superfamily (17.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%)" YMDKNVEEISAMVGFANR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0003700 (50%) GO:0043565 (50%)" "DNA-binding transcription factor activity (50%) sequence-specific DNA binding (50%)" "IPR018060 (51.7%) IPR009057 (48.3%)" "AraC-like, DNA binding HTH domain (51.7%) Homedomain-like superfamily (48.3%)" LGIAAQSVGLSQAAYNEALAYAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.3.99.- (100%) With other acceptors (100%) "GO:0003995 (49.3%) GO:0050660 (49.3%) GO:0016937 (1.3%)" "acyl-CoA dehydrogenase activity (49.3%) flavin adenine dinucleotide binding (49.3%) short-chain fatty acyl-CoA dehydrogenase activity (1.3%)" "IPR006089 (9.2%) IPR009075 (9.2%) IPR036250 (9.2%)" "Acyl-CoA dehydrogenase, conserved site (9.2%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.2%) Acyl-CoA dehydrogenase-like, C-terminal (9.2%)" EGDIEKVWANPEHANK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR005886 (33.3%) IPR036291 (33.3%) IPR001509 (23.3%)" "UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD-dependent epimerase/dehydratase (23.3%)" AGIADPNRPIGSFLFLGPTGVGK root "GO:0034605 (17.4%) GO:0042026 (14.2%) GO:0006508 (1.8%)" "GO:0005829 (12.7%) GO:0005737 (4.7%) GO:0016020 (0%)" "GO:0005524 (17.4%) GO:0016887 (17.4%) GO:0042802 (12.7%)" "cellular response to heat (17.4%) protein refolding (14.2%) proteolysis (1.8%)" "cytosol (12.7%) cytoplasm (4.7%) membrane (0%)" "ATP binding (17.4%) ATP hydrolysis activity (17.4%) identical protein binding (12.7%)" "IPR003959 (8.7%) IPR027417 (8.7%) IPR050130 (8.7%)" "ATPase, AAA-type, core (8.7%) P-loop containing nucleoside triphosphate hydrolase (8.7%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.7%)" VGIPQHLSELGIKEEDLPR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.77 (100%) lactaldehyde reductase (100%) "GO:0004022 (38.6%) GO:0046872 (38.6%) GO:0008912 (22.8%)" "alcohol dehydrogenase (NAD+) activity (38.6%) metal ion binding (38.6%) lactaldehyde reductase activity (22.8%)" "IPR001670 (20%) IPR013460 (20%) IPR018211 (20%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (20%) Lactaldehyde reductase (20%) Alcohol dehydrogenase, iron-type, conserved site (20%)" VAMLSYSTGTSGAGSDVEKVR root "2.3.1.8 (99.7%) 2.3.-.- (0.1%) 2.3.1.222 (0.1%)" "phosphate acetyltransferase (99.7%) Acyltransferases (0.1%) phosphate propanoyltransferase (0.1%)" "GO:0006085 (29%) GO:0006083 (0%) GO:0019413 (0%)" "GO:0005737 (33.8%) GO:0005829 (0%)" "GO:0008959 (35.9%) GO:0016407 (0.5%) GO:0016746 (0.4%)" "acetyl-CoA biosynthetic process (29%) acetate metabolic process (0%) acetate biosynthetic process (0%)" "cytoplasm (33.8%) cytosol (0%)" "phosphate acetyltransferase activity (35.9%) acetyltransferase activity (0.5%) acyltransferase activity (0.4%)" "IPR002505 (11.5%) IPR050500 (11.5%) IPR042112 (11.3%)" "Phosphate acetyl/butaryl transferase (11.5%) Phosphate Acetyltransferase/Butyryltransferase (11.5%) Phosphate acetyltransferase, domain 2 (11.3%)" VICAFVVNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0015031 (16.7%) GO:0015891 (16.7%) GO:0055085 (16.7%)" "GO:0030288 (16.7%) GO:0098797 (16.7%)" GO:0031992 (16.7%) "protein transport (16.7%) siderophore transport (16.7%) transmembrane transport (16.7%)" "outer membrane-bounded periplasmic space (16.7%) plasma membrane protein complex (16.7%)" energy transducer activity (16.7%) "IPR003538 (25%) IPR006260 (25%) IPR037682 (25%)" "Gram-negative bacterial TonB protein (25%) TonB/TolA, C-terminal (25%) TonB, C-terminal (25%)" KEVINEDELIQLMEERPDFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (43.4%) GO:0016616 (39.6%) GO:0016787 (13.2%)" "NAD binding (43.4%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (39.6%) hydrolase activity (13.2%)" "IPR006139 (33.3%) IPR006140 (33.3%) IPR036291 (33.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" GDFAHEVFGELVK Bacteroidota Bacteria Pseudomonadati Bacteroidota "4.1.2.14 (51.4%) 4.1.3.16 (45.9%) 4.1.3.42 (2.7%)" "2-dehydro-3-deoxy-phosphogluconate aldolase (51.4%) 4-hydroxy-2-oxoglutarate aldolase (45.9%) (4S)-4-hydroxy-2-oxoglutarate aldolase (2.7%)" "GO:0016829 (53.1%) GO:0008675 (25%) GO:0008700 (21.9%)" "lyase activity (53.1%) 2-dehydro-3-deoxy-phosphogluconate aldolase activity (25%) (R,S)-4-hydroxy-2-oxoglutarate aldolase activity (21.9%)" "IPR013785 (51%) IPR000887 (49%)" "Aldolase-type TIM barrel (51%) KDPG/KHG aldolase (49%)" VSGELLSDYYHIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.103 (50%) 4.2.1.47 (50%)" "L-threonine 3-dehydrogenase (50%) GDP-mannose 4,6-dehydratase (50%)" GO:0006567 (48.6%) "GO:0008743 (48.6%) GO:0016829 (2.7%)" L-threonine catabolic process (48.6%) "L-threonine 3-dehydrogenase activity (48.6%) lyase activity (2.7%)" "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" TNLNPEEVEVVLTATTTPDHHFPTTSSIIAYHTGCK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) "GO:0006633 (20%) GO:0044550 (20%)" GO:0005737 (20%) "GO:0004315 (20%) GO:0033818 (20%)" "fatty acid biosynthetic process (20%) secondary metabolite biosynthetic process (20%)" cytoplasm (20%) "3-oxoacyl-[acyl-carrier-protein] synthase activity (20%) beta-ketoacyl-acyl-carrier-protein synthase III activity (20%)" "IPR004655 (25%) IPR013747 (25%) IPR013751 (25%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III (25%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (25%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (25%)" LVDAINQLREGFER root 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006531 (21%) GO:0006099 (18.3%) GO:0006533 (0.2%)" "GO:0005829 (21%) GO:0016020 (0.2%)" "GO:0008797 (21%) GO:0042802 (17.3%) GO:0016829 (0.6%)" "aspartate metabolic process (21%) tricarboxylic acid cycle (18.3%) L-aspartate catabolic process (0.2%)" "cytosol (21%) membrane (0.2%)" "aspartate ammonia-lyase activity (21%) identical protein binding (17.3%) lyase activity (0.6%)" "IPR008948 (13.1%) IPR022761 (13.1%) IPR051546 (13.1%)" "L-Aspartase-like (13.1%) Fumarate lyase, N-terminal (13.1%) Class-II Aspartate Ammonia-Lyase (13.1%)" DGVTVAKEIELTDAYQNTGAQLVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.4%) GO:0005737 (15.7%) "GO:0005524 (17.4%) GO:0140662 (17.4%) GO:0016853 (16.5%)" protein refolding (17.4%) cytoplasm (15.7%) "ATP binding (17.4%) ATP-dependent protein folding chaperone (17.4%) isomerase activity (16.5%)" "IPR001844 (16.9%) IPR002423 (16.9%) IPR027410 (16.9%)" "Chaperonin Cpn60/GroEL (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%) TCP-1-like chaperonin intermediate domain superfamily (16.9%)" AINPNANIVVAPSDHLILK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.13 (100%) mannose-1-phosphate guanylyltransferase (100%) GO:0009298 (30.8%) "GO:0004475 (30.8%) GO:0005525 (30.8%) GO:0016853 (4.8%)" GDP-mannose biosynthetic process (30.8%) "mannose-1-phosphate guanylyltransferase (GTP) activity (30.8%) GTP binding (30.8%) isomerase activity (4.8%)" "IPR005835 (24.9%) IPR029044 (24.9%) IPR049577 (24.9%)" "Nucleotidyl transferase domain (24.9%) Nucleotide-diphospho-sugar transferases (24.9%) GDP-mannose pyrophosphorylase, N-terminal domain (24.9%)" KTYSPLDVVFR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "4.1.1.12 (86.4%) 2.6.1.1 (9.1%) 2.6.1.- (4.5%)" "aspartate 4-decarboxylase (86.4%) aspartate transaminase (9.1%) Transaminases (4.5%)" GO:0006520 (27.1%) "GO:0030170 (27.1%) GO:0008483 (25%) GO:0047688 (12.5%)" amino acid metabolic process (27.1%) "pyridoxal phosphate binding (27.1%) transaminase activity (25%) aspartate 4-decarboxylase activity (12.5%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" ERIEGVEFFAVNTDAQALRK root 3.4.24.- (100%) Metalloendopeptidases (100%) "GO:0000917 (14.1%) GO:0043093 (13.8%) GO:0051258 (13.8%)" "GO:0005737 (14.4%) GO:0032153 (14.4%) GO:0005886 (0%)" "GO:0003924 (14.4%) GO:0005525 (14.4%) GO:0016787 (0%)" "division septum assembly (14.1%) FtsZ-dependent cytokinesis (13.8%) protein polymerization (13.8%)" "cytoplasm (14.4%) cell division site (14.4%) plasma membrane (0%)" "GTPase activity (14.4%) GTP binding (14.4%) hydrolase activity (0%)" "IPR036525 (11.4%) IPR045061 (11.4%) IPR003008 (11.3%)" "Tubulin/FtsZ, GTPase domain superfamily (11.4%) Tubulin-like protein FtsZ/CetZ (11.4%) Tubulin/FtsZ, GTPase domain (11.3%)" TIDGDLKNEMIETSFGFDTACK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.4%) GO:0009749 (14.4%)" GO:0005829 (14.4%) "GO:0003872 (14.4%) GO:0046872 (14.4%) GO:0047334 (14.2%)" "fructose 6-phosphate metabolic process (14.4%) response to glucose (14.4%)" cytosol (14.4%) "6-phosphofructokinase activity (14.4%) metal ion binding (14.4%) diphosphate-fructose-6-phosphate 1-phosphotransferase activity (14.2%)" "IPR000023 (25.3%) IPR022953 (25.3%) IPR035966 (25.3%)" "Phosphofructokinase domain (25.3%) ATP-dependent 6-phosphofructokinase (25.3%) Phosphofructokinase superfamily (25.3%)" HLLNYVNTLNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0004784 (50%) GO:0046872 (50%)" "superoxide dismutase activity (50%) metal ion binding (50%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" FFKPEEIFDYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.4.6 (100%) nucleoside-diphosphate kinase (100%) "GO:0006183 (18.1%) GO:0006228 (18.1%) GO:0006241 (18.1%)" "GO:0005758 (0.6%) GO:0005759 (0.6%) GO:0005737 (0.3%)" "GO:0004550 (18.1%) GO:0005524 (14.5%) GO:0046872 (11.1%)" "GTP biosynthetic process (18.1%) UTP biosynthetic process (18.1%) CTP biosynthetic process (18.1%)" "mitochondrial intermembrane space (0.6%) mitochondrial matrix (0.6%) cytoplasm (0.3%)" "nucleoside diphosphate kinase activity (18.1%) ATP binding (14.5%) metal ion binding (11.1%)" "IPR001564 (29.4%) IPR034907 (29.4%) IPR036850 (29.4%)" "Nucleoside diphosphate kinase (29.4%) Nucleoside diphosphate kinase-like domain (29.4%) Nucleoside diphosphate kinase-like domain superfamily (29.4%)" FFEEGALSEDDMR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" KLVQSGGVSFNKEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.9%) GO:0005829 (16.9%) "GO:0003723 (16.9%) GO:0004831 (16.9%) GO:0005524 (16.9%)" tyrosyl-tRNA aminoacylation (16.9%) cytosol (16.9%) "RNA binding (16.9%) tyrosine-tRNA ligase activity (16.9%) ATP binding (16.9%)" "IPR001412 (12.5%) IPR002305 (12.5%) IPR002307 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Aminoacyl-tRNA synthetase, class Ic (12.5%) Tyrosine-tRNA ligase (12.5%)" EGVDVSITGNSTNPTR root IPR025964 (100%) GGGtGRT protein (100%) YVIIGHSERR root "5.3.1.1 (99.5%) 2.7.2.3 (0.4%) 1.2.1.12 (0%)" "triose-phosphate isomerase (99.5%) phosphoglycerate kinase (0.4%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (0%)" "GO:0006094 (16.5%) GO:0006096 (16.5%) GO:0019563 (16.4%)" "GO:0005829 (16.5%) GO:0016020 (0.5%) GO:0020015 (0%)" "GO:0004807 (16.5%) GO:0005524 (0.1%) GO:0004618 (0.1%)" "gluconeogenesis (16.5%) glycolytic process (16.5%) glycerol catabolic process (16.4%)" "cytosol (16.5%) membrane (0.5%) glycosome (0%)" "triose-phosphate isomerase activity (16.5%) ATP binding (0.1%) phosphoglycerate kinase activity (0.1%)" "IPR000652 (20.7%) IPR013785 (20.7%) IPR035990 (20.7%)" "Triosephosphate isomerase (20.7%) Aldolase-type TIM barrel (20.7%) Triosephosphate isomerase superfamily (20.7%)" IIGIDLGTTNSCVAVLEGNEPVVIANSEGKR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae "GO:0005737 (22.4%) GO:0070013 (3.2%)" "GO:0005524 (24.8%) GO:0051082 (24.8%) GO:0140662 (24.8%)" "cytoplasm (22.4%) intracellular organelle lumen (3.2%)" "ATP binding (24.8%) unfolded protein binding (24.8%) ATP-dependent protein folding chaperone (24.8%)" "IPR012725 (16.8%) IPR013126 (16.8%) IPR018181 (16.8%)" "Chaperone DnaK (16.8%) Heat shock protein 70 family (16.8%) Heat shock protein 70, conserved site (16.8%)" AFGGAMGGFTTGKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.29 (98.2%) 2.3.1.50 (1.8%)" "glycine C-acetyltransferase (98.2%) serine C-palmitoyltransferase (1.8%)" "GO:0030148 (13.9%) GO:0019518 (13.6%) GO:0006567 (0.6%)" "GO:0005829 (14.2%) GO:0016020 (13.9%)" "GO:0008890 (14.2%) GO:0030170 (14.2%) GO:0004758 (8.2%)" "sphingolipid biosynthetic process (13.9%) L-threonine catabolic process to glycine (13.6%) L-threonine catabolic process (0.6%)" "cytosol (14.2%) membrane (13.9%)" "glycine C-acetyltransferase activity (14.2%) pyridoxal phosphate binding (14.2%) serine C-palmitoyltransferase activity (8.2%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" SIWMIGLHAFAK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "7.1.1.- (92%) 1.6.5.9 (4.1%) 1.6.5.11 (3.1%)" "Hydron translocation or charge separation linked to oxidoreductase reactions (92%) NADH:ubiquinone reductase (non-electrogenic) (4.1%) Transferred entry: 1.6.5.9 (3.1%)" "GO:0009060 (16.6%) GO:0022904 (0%)" "GO:0005886 (16.4%) GO:0016020 (0.2%) GO:0045271 (0.1%)" "GO:0051539 (16.6%) GO:0048038 (16.4%) GO:0005506 (16.3%)" "aerobic respiration (16.6%) respiratory electron transport chain (0%)" "plasma membrane (16.4%) membrane (0.2%) respiratory chain complex I (0.1%)" "4 iron, 4 sulfur cluster binding (16.6%) quinone binding (16.4%) iron ion binding (16.3%)" "IPR010226 (33.3%) IPR017896 (33.3%) IPR017900 (33.3%)" "NADH-quinone oxidoreductase, chain I (33.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (33.3%) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (33.3%)" VGLINSGGESHGASDLKDAVVTAVINKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (50%) GO:0004332 (50%) glycolytic process (50%) fructose-bisphosphate aldolase activity (50%) "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" TKGYHPGTVYETEIGNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011659 (50%) IPR011990 (50%)" "WD40-like beta-propeller (50%) Tetratricopeptide-like helical domain superfamily (50%)" ITGRPHGLFDYYGAQDADRVIIAMGSVTEAAR VLPAVAMLEER root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.6%) GO:0006094 (16.6%) GO:0008615 (0%)" "GO:0005829 (16.6%) GO:0005737 (0%)" "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "glycolytic process (16.6%) gluconeogenesis (16.6%) pyridoxine biosynthetic process (0%)" "cytosol (16.6%) cytoplasm (0%)" "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (25.1%) IPR015824 (25.1%) IPR036043 (25.1%)" "Phosphoglycerate kinase (25.1%) Phosphoglycerate kinase, N-terminal (25.1%) Phosphoglycerate kinase superfamily (25.1%)" FCGAEGLNNVITLSTFR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.11.1.24 (95.5%) 1.11.1.- (4.5%)" "thioredoxin-dependent peroxiredoxin (95.5%) Peroxidases (4.5%)" GO:0034599 (46.7%) "GO:0005829 (0.5%) GO:0042597 (0.5%)" "GO:0008379 (49.5%) GO:0004601 (2.3%) GO:0032843 (0.5%)" cellular response to oxidative stress (46.7%) "cytosol (0.5%) periplasmic space (0.5%)" "thioredoxin peroxidase activity (49.5%) peroxidase activity (2.3%) hydroperoxide reductase activity (0.5%)" "IPR013740 (16.8%) IPR036249 (16.8%) IPR050455 (16.8%)" "Redoxin (16.8%) Thioredoxin-like superfamily (16.8%) Thiol Peroxidase Tpx Subfamily (16.8%)" KMGGMTFVDIR Bacteria Bacteria 6.1.1.12 (100%) aspartate--tRNA ligase (100%) "GO:0006422 (19.9%) GO:0006430 (0.3%)" GO:0005737 (19.7%) "GO:0003676 (19.9%) GO:0004815 (19.9%) GO:0005524 (19.9%)" "aspartyl-tRNA aminoacylation (19.9%) lysyl-tRNA aminoacylation (0.3%)" cytoplasm (19.7%) "nucleic acid binding (19.9%) aspartate-tRNA ligase activity (19.9%) ATP binding (19.9%)" "IPR004365 (9.2%) IPR012340 (9.2%) IPR047089 (9.2%)" "OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (9.2%) Nucleic acid-binding, OB-fold (9.2%) Aspartate-tRNA ligase, type 1, anticodon recognition domain (9.2%)" KAAEEAEANALFEQAVQALK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR025347 (100%) Protein of unknown function DUF4251 (100%) MSYATSDENIIEAMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" EMHCAVFTPSSIGVFGNNTPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" IEIATVGLWWSHLLELLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" LIVGGGSAYSR root 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.3%) GO:0035999 (15.3%) GO:0032259 (11.2%)" "GO:0005829 (15%) GO:0005739 (0.3%)" "GO:0004372 (15.3%) GO:0030170 (15.3%) GO:0008168 (11.2%)" "glycine biosynthetic process from serine (15.3%) tetrahydrofolate interconversion (15.3%) methylation (11.2%)" "cytosol (15%) mitochondrion (0.3%)" "glycine hydroxymethyltransferase activity (15.3%) pyridoxal phosphate binding (15.3%) methyltransferase activity (11.2%)" "IPR001085 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Serine hydroxymethyltransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" FNFSHGSHEEHKER Bacteria Bacteria 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (16.1%) "GO:0000287 (16.8%) GO:0004743 (16.8%) GO:0005524 (16.8%)" response to stress (16.1%) "magnesium ion binding (16.8%) pyruvate kinase activity (16.8%) ATP binding (16.8%)" "IPR001697 (9.3%) IPR011037 (9.3%) IPR015793 (9.3%)" "Pyruvate kinase (9.3%) Pyruvate kinase-like, insert domain superfamily (9.3%) Pyruvate kinase, barrel (9.3%)" TTKLHVHDENNECGIGDVVEIR root "GO:0006412 (24.5%) GO:0000028 (0.2%) GO:0002181 (0.1%)" "GO:0022627 (24.6%) GO:0005840 (1%) GO:0005737 (0.1%)" "GO:0003735 (24.6%) GO:0019843 (24.6%) GO:0008270 (0.1%)" "translation (24.5%) ribosomal small subunit assembly (0.2%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (24.6%) ribosome (1%) cytoplasm (0.1%)" "structural constituent of ribosome (24.6%) rRNA binding (24.6%) zinc ion binding (0.1%)" "IPR000266 (25%) IPR012340 (25%) IPR019979 (25%)" "Small ribosomal subunit protein uS17 (25%) Nucleic acid-binding, OB-fold (25%) Small ribosomal subunit protein uS17, conserved site (25%)" VLLMPFMFVAGDHAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.99.1.3 (100%) sirohydrochlorin cobaltochelatase (100%) GO:0019251 (33.3%) "GO:0016852 (33.3%) GO:0046872 (33.3%)" anaerobic cobalamin biosynthetic process (33.3%) "sirohydrochlorin cobaltochelatase activity (33.3%) metal ion binding (33.3%)" IPR010388 (100%) Anaerobic cobalt chelatase (100%) GLNVHPGYAK Pseudomonadati Bacteria Pseudomonadati 3.4.11.4 (100%) tripeptide aminopeptidase (100%) "GO:0006508 (16.5%) GO:0043171 (14.8%) GO:0006518 (1.8%)" GO:0005829 (16.9%) "GO:0045148 (16.9%) GO:0008237 (16.5%) GO:0008270 (16.5%)" "proteolysis (16.5%) peptide catabolic process (14.8%) peptide metabolic process (1.8%)" cytosol (16.9%) "tripeptide aminopeptidase activity (16.9%) metallopeptidase activity (16.5%) zinc ion binding (16.5%)" "IPR011650 (20.3%) IPR036264 (20.3%) IPR001261 (19.8%)" "Peptidase M20, dimerisation domain (20.3%) Bacterial exopeptidase dimerisation domain (20.3%) ArgE/DapE/ACY1/CPG2/YscS, conserved site (19.8%)" TKLKDVVDGYVLER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043043 (33.3%) GO:0005829 (33.3%) GO:0003746 (33.3%) peptide biosynthetic process (33.3%) cytosol (33.3%) translation elongation factor activity (33.3%) "IPR001059 (11.1%) IPR008991 (11.1%) IPR011768 (11.1%)" "Translation elongation factor P/YeiP, central (11.1%) Translation protein SH3-like domain superfamily (11.1%) Translation elongation factor P (11.1%)" AMPVMNVGVILSGGQAPGGHNVIAGLFDGIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" NMSLDDVVTYIAQVVANR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" IKFYCEVHSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.2 (87.5%) 5.4.2.- (12.5%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (87.5%) Phosphotransferases (phosphomutases) (12.5%)" "GO:0005975 (24.2%) GO:0006166 (24.2%)" "GO:0000287 (24.2%) GO:0008973 (24.2%) GO:0004614 (3.2%)" "carbohydrate metabolic process (24.2%) purine ribonucleoside salvage (24.2%)" "magnesium ion binding (24.2%) phosphopentomutase activity (24.2%) phosphoglucomutase activity (3.2%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" GIDTVLAELR Bacteria Bacteria "1.14.-.- (33.3%) 3.-.-.- (33.3%) 4.3.2.1 (33.3%)" "Acting on paired donors, with incorporation or reduction of molecular oxygen. The oxygen incorporated need not be derived from O2 (33.3%) Hydrolases (33.3%) argininosuccinate lyase (33.3%)" "GO:0006412 (31.2%) GO:0006635 (0.4%) GO:0000027 (0.2%)" "GO:0022625 (31.4%) GO:0005840 (1.6%) GO:0005829 (0.4%)" "GO:0003735 (31.4%) GO:0016853 (0.4%) GO:0070403 (0.4%)" "translation (31.2%) fatty acid beta-oxidation (0.4%) ribosomal large subunit assembly (0.2%)" "cytosolic large ribosomal subunit (31.4%) ribosome (1.6%) cytosol (0.4%)" "structural constituent of ribosome (31.4%) isomerase activity (0.4%) NAD+ binding (0.4%)" "IPR026569 (24%) IPR034704 (24%) IPR037147 (24%)" "Large ribosomal subunit protein bL28 (24%) Large ribosomal subunit protein bL28/bL31-like superfamily (24%) Large ribosomal subunit protein bL28 superfamily (24%)" NIDRTTMVSVLEESFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006353 (19.6%) GO:0031564 (19.6%)" GO:0005829 (19.6%) "GO:0003700 (19.6%) GO:0003723 (19.6%) GO:0003746 (1.9%)" "DNA-templated transcription termination (19.6%) transcription antitermination (19.6%)" cytosol (19.6%) "DNA-binding transcription factor activity (19.6%) RNA binding (19.6%) translation elongation factor activity (1.9%)" "IPR013735 (12.6%) IPR030842 (12.6%) IPR036555 (12.6%)" "Transcription factor NusA, N-terminal (12.6%) Transcription factor NusA, prokaryotes (12.6%) NusA, N-terminal domain superfamily (12.6%)" FLHDLGVSIKEEPFQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.4 (100%) leucine--tRNA ligase (100%) GO:0006429 (20.2%) GO:0005829 (20.2%) "GO:0004823 (20.2%) GO:0005524 (20.2%) GO:0002161 (19.3%)" leucyl-tRNA aminoacylation (20.2%) cytosol (20.2%) "leucine-tRNA ligase activity (20.2%) ATP binding (20.2%) aminoacyl-tRNA deacylase activity (19.3%)" "IPR002302 (12.9%) IPR014729 (12.9%) IPR001412 (12.4%)" "Leucine-tRNA ligase (12.9%) Rossmann-like alpha/beta/alpha sandwich fold (12.9%) Aminoacyl-tRNA synthetase, class I, conserved site (12.4%)" GLLAVLLTAVEGK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.8.1.7 (100%) cysteine desulfurase (100%) GO:0061504 (3.3%) GO:1990228 (2.2%) "GO:0031071 (49.5%) GO:0016740 (39.6%) GO:0097163 (3.3%)" cyclic threonylcarbamoyladenosine biosynthetic process (3.3%) sulfurtransferase complex (2.2%) "cysteine desulfurase activity (49.5%) transferase activity (39.6%) sulfur carrier activity (3.3%)" "IPR003808 (50.4%) IPR017763 (49.6%)" "Fe-S metabolism associated domain, SufE-like (50.4%) Cysteine desulfurase, sulphur acceptor subunit CsdE (49.6%)" DNEHLMDLLNNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0043200 (32.3%) GO:0006355 (0.4%)" GO:0005829 (32.3%) "GO:0043565 (34.6%) GO:0003700 (0.4%)" "response to amino acid (32.3%) regulation of DNA-templated transcription (0.4%)" cytosol (32.3%) "sequence-specific DNA binding (34.6%) DNA-binding transcription factor activity (0.4%)" "IPR000485 (16.6%) IPR011008 (16.6%) IPR019887 (16.6%)" "AsnC-type HTH domain (16.6%) Dimeric alpha-beta barrel (16.6%) Transcription regulator AsnC/Lrp, ligand binding domain (16.6%)" NKELMDNMR root "5.2.1.8 (99.9%) 3.4.21.92 (0.1%)" "peptidylprolyl isomerase (99.9%) endopeptidase Clp (0.1%)" "GO:0015031 (12.6%) GO:0051301 (12.4%) GO:0043335 (12%)" "GO:0005737 (12.3%) GO:0005759 (0%) GO:0005829 (0%)" "GO:0003755 (12.6%) GO:0043022 (12%) GO:0044183 (12%)" "protein transport (12.6%) cell division (12.4%) protein unfolding (12%)" "cytoplasm (12.3%) mitochondrial matrix (0%) cytosol (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.6%) ribosome binding (12%) protein folding chaperone (12%)" "IPR027304 (12.7%) IPR037041 (12.7%) IPR008880 (12.7%)" "Trigger factor/SurA domain superfamily (12.7%) Trigger factor, C-terminal domain superfamily (12.7%) Trigger factor, C-terminal (12.7%)" DKGDLSENAEYDAAK root "GO:0006354 (20.1%) GO:0032784 (20.1%)" "GO:0003677 (20.1%) GO:0070063 (20.1%) GO:0003746 (19.6%)" "DNA-templated transcription elongation (20.1%) regulation of DNA-templated transcription elongation (20.1%)" "DNA binding (20.1%) RNA polymerase binding (20.1%) translation elongation factor activity (19.6%)" "IPR022691 (12.6%) IPR023459 (12.6%) IPR001437 (12.6%)" "Transcription elongation factor, GreA/GreB, N-terminal (12.6%) Transcription elongation factor GreA/GreB family (12.6%) Transcription elongation factor, GreA/GreB, C-terminal (12.6%)" SLISNPVAAEDAFTSR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (57.7%) "GO:0016853 (38.5%) GO:0003755 (3.8%)" plasma membrane (57.7%) "isomerase activity (38.5%) peptidyl-prolyl cis-trans isomerase activity (3.8%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" LLYVAPESLTKEENVEFLR Bacteroidota Bacteria Pseudomonadati Bacteroidota "5.6.2.4 (79.8%) 3.6.4.12 (19.1%) 3.6.1.- (1.1%)" "DNA 3'-5' helicase (79.8%) DNA helicase (19.1%) In phosphorus-containing anhydrides (1.1%)" "GO:0006281 (8.7%) GO:0006310 (8.7%) GO:0006260 (8.3%)" "GO:0005737 (8.7%) GO:0030894 (8.7%) GO:0043590 (8.7%)" "GO:0005524 (8.7%) GO:0009378 (8.7%) GO:0043138 (8.7%)" "DNA repair (8.7%) DNA recombination (8.7%) DNA replication (8.3%)" "cytoplasm (8.7%) replisome (8.7%) bacterial nucleoid (8.7%)" "ATP binding (8.7%) four-way junction helicase activity (8.7%) 3'-5' DNA helicase activity (8.7%)" "IPR011545 (7.6%) IPR014001 (7.6%) IPR027417 (7.6%)" "DEAD/DEAH-box helicase domain (7.6%) Helicase superfamily 1/2, ATP-binding domain (7.6%) P-loop containing nucleoside triphosphate hydrolase (7.6%)" DIPFKEVTYKGDTFATDIEAAMVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.-.- (100%) Glycosylases (100%) "GO:0008932 (80%) GO:0016798 (20%)" "lytic endotransglycosylase activity (80%) hydrolase activity, acting on glycosyl bonds (20%)" "IPR018392 (33.3%) IPR028082 (33.3%) IPR036779 (33.3%)" "LysM domain (33.3%) Periplasmic binding protein-like I (33.3%) LysM domain superfamily (33.3%)" GVIVVDGAGKVVYEELVPEITTEPNYDAALAALK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" LKDVHTGNTLNGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (25%) "GO:0003746 (25.4%) GO:0005525 (25%) GO:0003924 (24.6%)" ribosome disassembly (25%) "translation elongation factor activity (25.4%) GTP binding (25%) GTPase activity (24.6%)" "IPR000640 (7.5%) IPR005517 (7.5%) IPR009000 (7.5%)" "Elongation factor EFG, domain V-like (7.5%) Translation elongation factor EFG/EF2, domain IV (7.5%) Translation protein, beta-barrel domain superfamily (7.5%)" GADVALIGTPDGVK root 5.3.1.6 (100%) ribose-5-phosphate isomerase (100%) "GO:0009052 (25%) GO:0006014 (24.8%)" GO:0005829 (24.8%) "GO:0004751 (25%) GO:0016853 (0.2%) GO:0042802 (0.1%)" "pentose-phosphate shunt, non-oxidative branch (25%) D-ribose metabolic process (24.8%)" cytosol (24.8%) "ribose-5-phosphate isomerase activity (25%) isomerase activity (0.2%) identical protein binding (0.1%)" "IPR004788 (33.8%) IPR037171 (33.2%) IPR020672 (32.7%)" "Ribose 5-phosphate isomerase, type A (33.8%) NagB/RpiA transferase-like (33.2%) Ribose-5-phosphate isomerase, type A, subgroup (32.7%)" IINYLVEEFKK root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0009408 (0.2%) GO:0042026 (0.2%) GO:0051085 (0.2%)" "GO:0005737 (0.2%) GO:0005829 (0.2%) GO:0005886 (0.1%)" "GO:0005524 (26.8%) GO:0140662 (26.8%) GO:0051082 (24.8%)" "response to heat (0.2%) protein refolding (0.2%) obsolete chaperone cofactor-dependent protein refolding (0.2%)" "cytoplasm (0.2%) cytosol (0.2%) plasma membrane (0.1%)" "ATP binding (26.8%) ATP-dependent protein folding chaperone (26.8%) unfolded protein binding (24.8%)" "IPR013126 (17.2%) IPR043129 (17.2%) IPR018181 (17.2%)" "Heat shock protein 70 family (17.2%) ATPase, nucleotide binding domain (17.2%) Heat shock protein 70, conserved site (17.2%)" AISELVKQEIAAEVAGIVAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.5.1.5 (50%) 3.5.4.9 (50%)" "methylenetetrahydrofolate dehydrogenase (NADP(+)) (50%) methenyltetrahydrofolate cyclohydrolase (50%)" "GO:0000105 (14.3%) GO:0006164 (14.3%) GO:0009086 (14.3%)" GO:0005829 (14.3%) "GO:0004477 (14.3%) GO:0004488 (14.3%)" "L-histidine biosynthetic process (14.3%) purine nucleotide biosynthetic process (14.3%) methionine biosynthetic process (14.3%)" cytosol (14.3%) "methenyltetrahydrofolate cyclohydrolase activity (14.3%) methylenetetrahydrofolate dehydrogenase (NADP+) activity (14.3%)" "IPR000672 (16.7%) IPR020630 (16.7%) IPR020631 (16.7%)" "Tetrahydrofolate dehydrogenase/cyclohydrolase (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (16.7%)" SDIEIVAINDLLDADYMAYMLK root "1.2.1.- (81.4%) 1.2.1.12 (18.6%)" "With NAD(+) or NADP(+) as acceptor (81.4%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (18.6%)" "GO:0072524 (19.5%) GO:0006006 (18.5%) GO:0006096 (0.6%)" "GO:0005737 (0.5%) GO:0005576 (0.1%) GO:0005829 (0.1%)" "GO:0051287 (20.8%) GO:0050661 (18.5%) GO:0004365 (14.4%)" "pyridine-containing compound metabolic process (19.5%) glucose metabolic process (18.5%) glycolytic process (0.6%)" "cytoplasm (0.5%) extracellular region (0.1%) cytosol (0.1%)" "NAD binding (20.8%) NADP binding (18.5%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (14.4%)" "IPR020828 (17.2%) IPR020831 (17.2%) IPR036291 (17.2%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17.2%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.2%) NAD(P)-binding domain superfamily (17.2%)" TCIEAMAATLGHTQSLHTNALDEAIALPTDFSAR Bacteria Bacteria 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (16.7%) IPR006099 (16.7%) IPR006158 (16.7%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-binding domain (16.7%)" TGAYIFQEEMIPNEAVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR025379 (100%) Protein of unknown function DUF4295 (100%) RQSCEAAVAAIQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" GQLKEFLDANLA root "GO:0045454 (33.1%) GO:0006353 (0.1%)" "GO:0005829 (33.1%) GO:0005737 (0.1%)" "GO:0015035 (33.2%) GO:0003723 (0.1%) GO:0004386 (0.1%)" "cell redox homeostasis (33.1%) DNA-templated transcription termination (0.1%)" "cytosol (33.1%) cytoplasm (0.1%)" "protein-disulfide reductase activity (33.2%) RNA binding (0.1%) helicase activity (0.1%)" "IPR013766 (24.9%) IPR036249 (24.9%) IPR005746 (24.9%)" "Thioredoxin domain (24.9%) Thioredoxin-like superfamily (24.9%) Thioredoxin (24.9%)" GTTSVMFSEVANAPAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" DISLAQSMISLGSCTMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.6%) "GO:0005829 (16.6%) GO:0005960 (16.6%)" "GO:0004375 (16.6%) GO:0016594 (16.6%) GO:0030170 (16.6%)" glycine decarboxylation via glycine cleavage system (16.6%) "cytosol (16.6%) glycine cleavage complex (16.6%)" "glycine dehydrogenase (decarboxylating) activity (16.6%) glycine binding (16.6%) pyridoxal phosphate binding (16.6%)" "IPR015421 (14.4%) IPR015422 (14.4%) IPR015424 (14.4%)" "Pyridoxal phosphate-dependent transferase, major domain (14.4%) Pyridoxal phosphate-dependent transferase, small domain (14.4%) Pyridoxal phosphate-dependent transferase (14.4%)" FKHNDMDSLEK root 2.3.1.50 (100%) serine C-palmitoyltransferase (100%) "GO:0046512 (14.2%) GO:0046513 (14.2%) GO:0030148 (5.2%)" "GO:0005789 (12.7%) GO:0016020 (6.7%) GO:0005783 (1.5%)" "GO:0030170 (21.6%) GO:0004758 (14.2%) GO:0008483 (4.5%)" "sphingosine biosynthetic process (14.2%) ceramide biosynthetic process (14.2%) sphingolipid biosynthetic process (5.2%)" "endoplasmic reticulum membrane (12.7%) membrane (6.7%) endoplasmic reticulum (1.5%)" "pyridoxal phosphate binding (21.6%) serine C-palmitoyltransferase activity (14.2%) transaminase activity (4.5%)" "IPR004839 (18.7%) IPR015421 (18.7%) IPR015424 (18.7%)" "Aminotransferase, class I/classII, large domain (18.7%) Pyridoxal phosphate-dependent transferase, major domain (18.7%) Pyridoxal phosphate-dependent transferase (18.7%)" AMENNLLNIYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (75%) GO:0004340 (25%)" "kinase activity (75%) glucokinase activity (25%)" "IPR000600 (34.1%) IPR043129 (34.1%) IPR049874 (31.8%)" "ROK family (34.1%) ATPase, nucleotide binding domain (34.1%) ROK, conserved site (31.8%)" VGSFDGGWGASYMAR root 4.1.3.36 (100%) 1,4-dihydroxy-2-naphthoyl-CoA synthase (100%) GO:0009234 (31.7%) GO:0005829 (31.7%) "GO:0008935 (31.7%) GO:0016853 (4.3%) GO:0016829 (0.4%)" menaquinone biosynthetic process (31.7%) cytosol (31.7%) "1,4-dihydroxy-2-naphthoyl-CoA synthase activity (31.7%) isomerase activity (4.3%) lyase activity (0.4%)" "IPR001753 (20%) IPR029045 (20%) IPR018376 (19.9%)" "Enoyl-CoA hydratase/isomerase (20%) ClpP/crotonase-like domain superfamily (20%) Enoyl-CoA hydratase/isomerase, conserved site (19.9%)" TQFIIQNHSQK Bacteria Bacteria 1.11.1.- (100%) Peroxidases (100%) "GO:0006979 (0.3%) GO:0009411 (0.3%) GO:0009636 (0.3%)" "GO:0042597 (97.3%) GO:0030288 (0.3%)" "GO:0004601 (0.3%) GO:0020037 (0.3%) GO:0046872 (0.3%)" "response to oxidative stress (0.3%) response to UV (0.3%) response to toxic substance (0.3%)" "periplasmic space (97.3%) outer membrane-bounded periplasmic space (0.3%)" "peroxidase activity (0.3%) heme binding (0.3%) metal ion binding (0.3%)" "IPR028096 (14.7%) IPR050894 (14.7%) IPR008972 (14.5%)" "EfeO-type cupredoxin-like domain (14.7%) Iron uptake system component EfeM/EfeO (14.7%) Cupredoxin (14.5%)" YFYSEGYEDR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" EIESVTNHDVK Pseudomonadati Bacteria Pseudomonadati 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (22.6%) GO:0044208 (22.6%) GO:0006188 (7.7%)" "GO:0004018 (30.3%) GO:0070626 (16.8%)" "'de novo' IMP biosynthetic process (22.6%) 'de novo' AMP biosynthetic process (22.6%) IMP biosynthetic process (7.7%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (30.3%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (16.8%)" "IPR008948 (12.5%) IPR013539 (12.5%) IPR020557 (12.5%)" "L-Aspartase-like (12.5%) Adenylosuccinate lyase PurB, C-terminal (12.5%) Fumarate lyase, conserved site (12.5%)" IFSAQVWNPEKPYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) GO:0005737 (20%) "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (20%)" glycogen biosynthetic process (20%) cytoplasm (20%) "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (20%)" "IPR004193 (12.5%) IPR006047 (12.5%) IPR006048 (12.5%)" "Glycoside hydrolase, family 13, N-terminal (12.5%) Glycosyl hydrolase family 13, catalytic domain (12.5%) Alpha-amylase/branching enzyme, C-terminal all beta (12.5%)" MTPQASNDWMVEHMFPFYPLGDLKDKE Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.-.- (50%) 1.2.7.3 (50%)" "Acting on the aldehyde or oxo group of donors (50%) 2-oxoglutarate synthase (50%)" GO:0044281 (33.3%) "GO:0030976 (33.3%) GO:0016625 (30.8%) GO:0047553 (2.6%)" small molecule metabolic process (33.3%) "thiamine pyrophosphate binding (33.3%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (30.8%) 2-oxoglutarate synthase activity (2.6%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" GYTYIIDPAALLYTGTNAVDATPFVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" LEKADYQPQVDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.3%) GO:0043335 (16.3%) GO:0051083 (16.3%)" "GO:0003755 (16.3%) GO:0043022 (16.3%) GO:0044183 (16.3%)" "protein transport (16.3%) protein unfolding (16.3%) 'de novo' cotranslational protein folding (16.3%)" "peptidyl-prolyl cis-trans isomerase activity (16.3%) ribosome binding (16.3%) protein folding chaperone (16.3%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" ALAQAMHQAGKPLGFMCIAPAMLPK root 4.2.1.- (100%) Hydro-lyases (100%) "GO:0008299 (0.9%) GO:0045828 (0.9%)" GO:0005829 (0.9%) "GO:0016829 (77.7%) GO:0016740 (19.6%)" "isoprenoid biosynthetic process (0.9%) obsolete positive regulation of isoprenoid metabolic process (0.9%)" cytosol (0.9%) "lyase activity (77.7%) transferase activity (19.6%)" "IPR029062 (51.4%) IPR026041 (48.6%)" "Class I glutamine amidotransferase-like (51.4%) Glyoxalase ElbB (48.6%)" ISVSTPIAQGLLGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006354 (20%) GO:0032784 (20%)" "GO:0003677 (20%) GO:0003746 (20%) GO:0070063 (20%)" "DNA-templated transcription elongation (20%) regulation of DNA-templated transcription elongation (20%)" "DNA binding (20%) translation elongation factor activity (20%) RNA polymerase binding (20%)" "IPR001437 (12.6%) IPR006359 (12.6%) IPR018151 (12.6%)" "Transcription elongation factor, GreA/GreB, C-terminal (12.6%) Transcription elongation factor GreA (12.6%) Transcription elongation factor, GreA/GreB, conserved site (12.6%)" EMFGEDTQIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002319 (14.3%) IPR004188 (14.3%) IPR004529 (14.3%)" "Phenylalanyl-tRNA synthetase (14.3%) Phenylalanine-tRNA ligase, class II, N-terminal (14.3%) Phenylalanyl-tRNA synthetase, class IIc, alpha subunit (14.3%)" IADELNMTVETVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0003677 (100%) DNA binding (100%) VQEYVIETHDQYPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR021474 (100%) Protein of unknown function DUF3127 (100%) KGPIFANFVLADEINRAPAK root "3.6.3.- (88.2%) 3.-.-.- (5.9%) 6.6.1.1 (5.9%)" "Acting on acid anhydrides; catalyzing transmembrane movement of substances (88.2%) Hydrolases (5.9%) magnesium chelatase (5.9%)" GO:0006355 (0.1%) "GO:0005524 (49.9%) GO:0016887 (49.9%) GO:0016851 (0.1%)" regulation of DNA-templated transcription (0.1%) "ATP binding (49.9%) ATP hydrolysis activity (49.9%) magnesium chelatase activity (0.1%)" "IPR011703 (25%) IPR050764 (25%) IPR027417 (25%)" "ATPase, AAA-3 (25%) CbbQ/NirQ/NorQ/GpvN (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" EGTQVWMSHGDTITAIPENFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (12.5%) IPR004739 (12.5%) IPR014729 (12.5%)" "GMP synthase, C-terminal (12.5%) GMP synthase, glutamine amidotransferase (12.5%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" LTEYIDKDSEAYDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.4.9 (100%) methenyltetrahydrofolate cyclohydrolase (100%) "GO:0016787 (50%) GO:0004477 (25%) GO:0003824 (16.7%)" "hydrolase activity (50%) methenyltetrahydrofolate cyclohydrolase activity (25%) catalytic activity (16.7%)" "IPR007044 (50%) IPR036178 (50%)" "Cyclodeaminase/cyclohydrolase (50%) Formimidoyltransferase-cyclodeaminase-like superfamily (50%)" GEGITHGYYKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "6.2.1.26 (50%) 6.2.1.3 (50%)" "o-succinylbenzoate--CoA ligase (50%) long-chain-fatty-acid--CoA ligase (50%)" GO:0016020 (48%) "GO:0004467 (48%) GO:0008756 (2%) GO:0016874 (2%)" membrane (48%) "long-chain fatty acid-CoA ligase activity (48%) o-succinylbenzoate-CoA ligase activity (2%) ligase activity (2%)" "IPR000873 (33.3%) IPR020845 (33.3%) IPR042099 (33.3%)" "AMP-dependent synthetase/ligase domain (33.3%) AMP-binding, conserved site (33.3%) ANL, N-terminal domain (33.3%)" DNHVDFAGGIEQAITR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 2.4.2.19 (100%) nicotinate-nucleotide diphosphorylase (carboxylating) (100%) "GO:0009435 (25%) GO:0034213 (25%)" GO:0005737 (25%) GO:0004514 (25%) "NAD+ biosynthetic process (25%) quinolinate catabolic process (25%)" cytoplasm (25%) nicotinate-nucleotide diphosphorylase (carboxylating) activity (25%) "IPR002638 (14.3%) IPR004393 (14.3%) IPR013785 (14.3%)" "Quinolinate phosphoribosyl transferase, C-terminal (14.3%) Nicotinate-nucleotide pyrophosphorylase (14.3%) Aldolase-type TIM barrel (14.3%)" SYLIKPQNYKPLLDLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.1.1 (100%) aspartate--ammonia ligase (100%) "GO:0070981 (24.2%) GO:0006529 (1.1%)" "GO:0005829 (24.2%) GO:0005737 (1.1%)" "GO:0004071 (25.3%) GO:0005524 (24.2%)" "L-asparagine biosynthetic process (24.2%) obsolete asparagine biosynthetic process (1.1%)" "cytosol (24.2%) cytoplasm (1.1%)" "aspartate-ammonia ligase activity (25.3%) ATP binding (24.2%)" "IPR004618 (33.8%) IPR045864 (33.8%) IPR006195 (32.4%)" "Aspartate--ammonia ligase (33.8%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (33.8%) Aminoacyl-tRNA synthetase, class II (32.4%)" SVVVIEKGEPQACNLTTTCDSK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.8.1.14 (100%) CoA-disulfide reductase (100%) "GO:0016491 (90%) GO:0050451 (10%)" "oxidoreductase activity (90%) CoA-disulfide reductase (NADPH) activity (10%)" "IPR001455 (9.1%) IPR001763 (9.1%) IPR004099 (9.1%)" "TusA-like domain (9.1%) Rhodanese-like domain (9.1%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (9.1%)" TTPSIVAFVEGGER root "GO:0005737 (10.3%) GO:0070013 (1.3%)" "GO:0005524 (29.7%) GO:0140662 (29.7%) GO:0051082 (29%)" "cytoplasm (10.3%) intracellular organelle lumen (1.3%)" "ATP binding (29.7%) ATP-dependent protein folding chaperone (29.7%) unfolded protein binding (29%)" "IPR013126 (16.9%) IPR018181 (16.9%) IPR043129 (16.9%)" "Heat shock protein 70 family (16.9%) Heat shock protein 70, conserved site (16.9%) ATPase, nucleotide binding domain (16.9%)" MFEPMELTNDAVIK Bacteria Bacteria 3.4.24.- (100%) Metalloendopeptidases (100%) "GO:0000917 (14.1%) GO:0043093 (13.9%) GO:0051258 (13.9%)" "GO:0005737 (14.4%) GO:0032153 (14.4%) GO:0005886 (0%)" "GO:0003924 (14.4%) GO:0005525 (14.4%) GO:0016787 (0%)" "division septum assembly (14.1%) FtsZ-dependent cytokinesis (13.9%) protein polymerization (13.9%)" "cytoplasm (14.4%) cell division site (14.4%) plasma membrane (0%)" "GTPase activity (14.4%) GTP binding (14.4%) hydrolase activity (0%)" "IPR036525 (11.4%) IPR045061 (11.4%) IPR003008 (11.3%)" "Tubulin/FtsZ, GTPase domain superfamily (11.4%) Tubulin-like protein FtsZ/CetZ (11.4%) Tubulin/FtsZ, GTPase domain (11.3%)" GQPAVFQGEKVEGNDQTISYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (46.5%) IPR019734 (41.9%) IPR013105 (10.5%)" "Tetratricopeptide-like helical domain superfamily (46.5%) Tetratricopeptide repeat (41.9%) Tetratricopeptide repeat 2 (10.5%)" SALAGSVATMDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (34%) "GO:0008448 (34%) GO:0046872 (31.6%) GO:0016787 (0.3%)" N-acetylglucosamine catabolic process (34%) "N-acetylglucosamine-6-phosphate deacetylase activity (34%) metal ion binding (31.6%) hydrolase activity (0.3%)" "IPR006680 (25.2%) IPR032466 (25.2%) IPR011059 (24.9%)" "Amidohydrolase-related (25.2%) Metal-dependent hydrolase (25.2%) Metal-dependent hydrolase, composite domain superfamily (24.9%)" NVCAVGTTVMR Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.4.99.17 (98.6%) 5.-.-.- (1.4%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase (98.6%) Isomerases (1.4%)" "GO:0002099 (32.5%) GO:0008616 (1.5%)" "GO:0005737 (32.5%) GO:0016020 (0.5%)" "GO:0051075 (32.5%) GO:0016757 (0.5%)" "tRNA wobble guanine modification (32.5%) tRNA queuosine(34) biosynthetic process (1.5%)" "cytoplasm (32.5%) membrane (0.5%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity (32.5%) glycosyltransferase activity (0.5%)" "IPR003699 (25%) IPR036100 (25%) IPR042118 (25%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA (25%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily (25%) QueA, domain 1 (25%)" SDKPVVLVGAMRPSTALSADGPLNLYNAVVTAGAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.1.1 (100%) asparaginase (100%) GO:0006528 (33.3%) GO:0042597 (33.3%) GO:0004067 (33.3%) asparagine metabolic process (33.3%) periplasmic space (33.3%) asparaginase activity (33.3%) "IPR004550 (11.1%) IPR006034 (11.1%) IPR020827 (11.1%)" "L-asparaginase, type II (11.1%) Asparaginase/glutaminase-like (11.1%) Asparaginase/glutaminase, active site 1 (11.1%)" MIPTIPDTVETSSNLAIINIGEGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" HMVHELVSNLRK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.4%) GO:0006096 (16.4%) GO:0019563 (16.4%)" "GO:0005829 (16.4%) GO:0016020 (0.2%)" "GO:0004807 (16.9%) GO:0016853 (0.7%) GO:0042802 (0.2%)" "gluconeogenesis (16.4%) glycolytic process (16.4%) glycerol catabolic process (16.4%)" "cytosol (16.4%) membrane (0.2%)" "triose-phosphate isomerase activity (16.9%) isomerase activity (0.7%) identical protein binding (0.2%)" "IPR000652 (20.8%) IPR013785 (20.8%) IPR035990 (20.8%)" "Triosephosphate isomerase (20.8%) Aldolase-type TIM barrel (20.8%) Triosephosphate isomerase superfamily (20.8%)" VDKIPSTLNWDLFTGPAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (85.7%) GO:0050112 (14.3%)" "nucleotide binding (85.7%) inositol 2-dehydrogenase (NAD+) activity (14.3%)" "IPR000683 (18.9%) IPR036291 (18.9%) IPR050463 (18.9%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (18.9%) NAD(P)-binding domain superfamily (18.9%) Gfo/Idh/MocA family oxidoreductases and glycosidases (18.9%)" GIASMHCSANTNMEGTSSAIFFGLSGTGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.1%) GO:0005829 (17.1%) "GO:0004612 (17.1%) GO:0005524 (17.1%) GO:0046872 (16.4%)" gluconeogenesis (17.1%) cytosol (17.1%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.1%) ATP binding (17.1%) metal ion binding (16.4%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" TLTYSAQTVGGKDLNEIKNVNMINSLQGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006826 (42.9%) GO:0009279 (52.4%) GO:0015344 (4.8%) iron ion transport (42.9%) cell outer membrane (52.4%) siderophore uptake transmembrane transporter activity (4.8%) "IPR008969 (13.4%) IPR012910 (13.4%) IPR023996 (13.4%)" "Carboxypeptidase-like, regulatory domain superfamily (13.4%) TonB-dependent receptor, plug domain (13.4%) TonB-dependent outer membrane protein, SusC/RagA (13.4%)" LFSDFSPVSTEKWMEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" QQNLDAIHDTVHEMCKDEAR Bacteria Bacteria 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (50%) GO:0016491 (31%) GO:0004601 (9.5%)" "iron ion binding (50%) oxidoreductase activity (31%) peroxidase activity (9.5%)" "IPR003251 (12.5%) IPR009040 (12.5%) IPR009078 (12.5%)" "Rubrerythrin, diiron-binding domain (12.5%) Ferritin-like diiron domain (12.5%) Ferritin-like superfamily (12.5%)" SVQTVTGQPDVDQVVLDEAIKNR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.-.-.- (100%) Transferases (100%) "GO:0008360 (14.3%) GO:0071555 (14.3%) GO:0018104 (14.1%)" "GO:0042597 (14.1%) GO:0005576 (14%) GO:0030288 (0.2%)" "GO:0016757 (14.3%) GO:0071972 (14.1%) GO:0004180 (0.2%)" "regulation of cell shape (14.3%) cell wall organization (14.3%) peptidoglycan-protein cross-linking (14.1%)" "periplasmic space (14.1%) extracellular region (14%) outer membrane-bounded periplasmic space (0.2%)" "glycosyltransferase activity (14.3%) peptidoglycan L,D-transpeptidase activity (14.1%) carboxypeptidase activity (0.2%)" "IPR005490 (25.2%) IPR041597 (25.2%) IPR038063 (24.9%)" "L,D-transpeptidase catalytic domain (25.2%) L,D-transpeptidase C-terminal domain (25.2%) L,D-transpeptidase catalytic domain-like (24.9%)" EMSNYSTSLSSITGGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.2%) "GO:0003746 (25.2%) GO:0005525 (25.2%) GO:0003924 (24.3%)" ribosome disassembly (25.2%) "translation elongation factor activity (25.2%) GTP binding (25.2%) GTPase activity (24.3%)" "IPR000640 (7.8%) IPR005517 (7.8%) IPR014721 (7.8%)" "Elongation factor EFG, domain V-like (7.8%) Translation elongation factor EFG/EF2, domain IV (7.8%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (7.8%)" SGPYLISPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.4.1.- (50%) 2.4.1.319 (50%)" "Hexosyltransferases (50%) beta-1,4-mannooligosaccharide phosphorylase (50%)" GO:0016020 (1.5%) "GO:0016757 (59.7%) GO:0016798 (31.3%) GO:0016787 (7.5%)" membrane (1.5%) "glycosyltransferase activity (59.7%) hydrolase activity, acting on glycosyl bonds (31.3%) hydrolase activity (7.5%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" GGSEELYKK root 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.7%) GO:0035999 (15%) GO:0032259 (9.6%)" "GO:0005829 (15.7%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0004372 (15.7%) GO:0030170 (15.7%) GO:0008168 (9.6%)" "glycine biosynthetic process from serine (15.7%) tetrahydrofolate interconversion (15%) methylation (9.6%)" "cytosol (15.7%) cytoplasm (0.1%) membrane (0.1%)" "glycine hydroxymethyltransferase activity (15.7%) pyridoxal phosphate binding (15.7%) methyltransferase activity (9.6%)" "IPR015421 (14.4%) IPR015424 (14.4%) IPR019798 (14.4%)" "Pyridoxal phosphate-dependent transferase, major domain (14.4%) Pyridoxal phosphate-dependent transferase (14.4%) Serine hydroxymethyltransferase, pyridoxal phosphate binding site (14.4%)" LLADRIIELEGVPVLDPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.16.3.1 (100%) ferroxidase (100%) GO:0006879 (19.9%) GO:0005829 (19.9%) "GO:0004322 (19.9%) GO:0008199 (19.9%) GO:0020037 (19.9%)" intracellular iron ion homeostasis (19.9%) cytosol (19.9%) "ferroxidase activity (19.9%) ferric iron binding (19.9%) heme binding (19.9%)" "IPR008331 (16.8%) IPR009078 (16.8%) IPR012347 (16.8%)" "Ferritin/DPS domain (16.8%) Ferritin-like superfamily (16.8%) Ferritin-like (16.8%)" SDLENKTQEETPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0003700 (50%) GO:0043565 (50%)" "DNA-binding transcription factor activity (50%) sequence-specific DNA binding (50%)" "IPR009057 (50%) IPR018060 (50%)" "Homedomain-like superfamily (50%) AraC-like, DNA binding HTH domain (50%)" QNITGEKIEVRPILK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR011703 (25%) IPR027417 (25%) IPR041628 (25%)" "ATPase, AAA-3 (25%) P-loop containing nucleoside triphosphate hydrolase (25%) ChlI/MoxR, AAA lid domain (25%)" NAADTAEVGCK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR006311 (20%) IPR013022 (20%) IPR019546 (20%)" "Twin-arginine translocation pathway, signal sequence (20%) Xylose isomerase-like, TIM barrel domain (20%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (20%)" FKDGDTITVEPWR Bacteria Bacteria "1.3.5.1 (61.9%) 1.3.99.1 (28.6%) 1.3.5.4 (9.5%)" "succinate dehydrogenase (61.9%) Deleted entry (28.6%) Transferred entry: 1.3.5.1 (9.5%)" "GO:0022904 (21.2%) GO:0009060 (17.4%) GO:0006099 (3.8%)" "GO:0009055 (21.2%) GO:0051537 (21.2%) GO:0016491 (4.1%)" "respiratory electron transport chain (21.2%) aerobic respiration (17.4%) tricarboxylic acid cycle (3.8%)" "electron transfer activity (21.2%) 2 iron, 2 sulfur cluster binding (21.2%) oxidoreductase activity (4.1%)" "IPR006058 (13.3%) IPR009051 (13.3%) IPR012675 (13.3%)" "2Fe-2S ferredoxin, iron-sulphur binding site (13.3%) Alpha-helical ferredoxin (13.3%) Beta-grasp domain superfamily (13.3%)" WIGISSSLVSK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.3.1.1 (100%) dihydrouracil dehydrogenase (NAD(+)) (100%) "GO:0006210 (13.9%) GO:0006212 (13.9%) GO:0044205 (11.9%)" GO:0005737 (13.9%) "GO:0002058 (13.9%) GO:0050661 (13.9%) GO:0004152 (12.9%)" "thymine catabolic process (13.9%) uracil catabolic process (13.9%) 'de novo' UMP biosynthetic process (11.9%)" cytoplasm (13.9%) "uracil binding (13.9%) NADP binding (13.9%) dihydroorotate dehydrogenase activity (12.9%)" "IPR005720 (33.3%) IPR012135 (33.3%) IPR013785 (33.3%)" "Dihydroorotate dehydrogenase, catalytic (33.3%) Dihydroorotate dehydrogenase, class 1/ 2 (33.3%) Aldolase-type TIM barrel (33.3%)" LRPSYFPFTEPSAEMDISCNICGGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) "GO:0006432 (16.6%) GO:0043039 (0.1%)" GO:0005737 (16.6%) "GO:0000049 (16.7%) GO:0004826 (16.7%) GO:0005524 (16.7%)" "phenylalanyl-tRNA aminoacylation (16.6%) tRNA aminoacylation (0.1%)" cytoplasm (16.6%) "tRNA binding (16.7%) phenylalanine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002319 (14.6%) IPR045864 (14.6%) IPR006195 (14.5%)" "Phenylalanyl-tRNA synthetase (14.6%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.6%) Aminoacyl-tRNA synthetase, class II (14.5%)" LENFIVDLVGDNHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) MTPTIELICGHR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.5.1.38 (53.3%) 1.-.-.- (46.7%)" "FMN reductase (NADPH) (53.3%) Oxidoreductases (46.7%)" "GO:0005829 (0.7%) GO:0016020 (0.7%)" "GO:0016491 (69.5%) GO:0052873 (27.2%) GO:0003955 (0.7%)" "cytosol (0.7%) membrane (0.7%)" "oxidoreductase activity (69.5%) FMN reductase (NADPH) activity (27.2%) NAD(P)H dehydrogenase (quinone) activity (0.7%)" "IPR000415 (33.3%) IPR029479 (33.3%) IPR016446 (33%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Flavin oxidoreductase Frp family (33%)" MNAANIEQGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" VGDLLHNFEEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (15.7%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (15.7%)" "IPR001114 (14.4%) IPR027417 (14.4%) IPR033128 (14.4%)" "Adenylosuccinate synthetase (14.4%) P-loop containing nucleoside triphosphate hydrolase (14.4%) Adenylosuccinate synthase, active site (14.4%)" IGETHEGASQMDWMEQEKER Bacillota Bacteria Bacillati Bacillota "GO:0032790 (20.1%) GO:0006412 (0.4%)" GO:0005737 (19.7%) "GO:0003924 (20.1%) GO:0005525 (20.1%) GO:0003746 (19.7%)" "ribosome disassembly (20.1%) translation (0.4%)" cytoplasm (19.7%) "GTPase activity (20.1%) GTP binding (20.1%) translation elongation factor activity (19.7%)" "IPR000795 (6.3%) IPR005225 (6.3%) IPR027417 (6.3%)" "Translational (tr)-type GTP-binding domain (6.3%) Small GTP-binding domain (6.3%) P-loop containing nucleoside triphosphate hydrolase (6.3%)" NGTTEPYDREK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) GO:0009263 (25%) GO:0005971 (25%) "GO:0004748 (25%) GO:0005524 (25%)" deoxyribonucleotide biosynthetic process (25%) ribonucleoside-diphosphate reductase complex (25%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (25%) ATP binding (25%)" "IPR000788 (16.7%) IPR005144 (16.7%) IPR008926 (16.7%)" "Ribonucleotide reductase large subunit, C-terminal (16.7%) ATP-cone domain (16.7%) Ribonucleotide reductase R1 subunit, N-terminal (16.7%)" GNVEYWVALIQPGK root "GO:0006412 (19.9%) GO:0002181 (0%) GO:0000027 (0%)" "GO:0022625 (19.9%) GO:0005840 (0.2%) GO:0005737 (0%)" "GO:0003735 (20%) GO:0019843 (20%) GO:0000049 (19.8%)" "translation (19.9%) cytoplasmic translation (0%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (19.9%) ribosome (0.2%) cytoplasm (0%)" "structural constituent of ribosome (20%) rRNA binding (20%) tRNA binding (19.8%)" "IPR000114 (19.9%) IPR016180 (19.9%) IPR047873 (19.9%)" "Large ribosomal subunit protein uL16, bacteria (19.9%) Large ribosomal subunit protein uL16 domain (19.9%) Large ribosomal subunit protein uL16 (19.9%)" ATGSASFNQTLSEKR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006811 (21.6%) "GO:0009279 (23%) GO:0046930 (21.6%) GO:0016020 (12.2%)" GO:0015288 (21.6%) monoatomic ion transport (21.6%) "cell outer membrane (23%) pore complex (21.6%) membrane (12.2%)" porin activity (21.6%) "IPR006665 (18.6%) IPR036737 (17.9%) IPR050330 (17.9%)" "OmpA-like domain (18.6%) OmpA-like domain superfamily (17.9%) Bacterial Outer Membrane Structural/Functional (17.9%)" AEIKNTTSDYDKEKLQER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (18%) GO:0005737 (15.3%) "GO:0005524 (18%) GO:0140662 (18%) GO:0016853 (15.3%)" protein refolding (18%) cytoplasm (15.3%) "ATP binding (18%) ATP-dependent protein folding chaperone (18%) isomerase activity (15.3%)" "IPR001844 (17.2%) IPR002423 (17.2%) IPR018370 (17.2%)" "Chaperonin Cpn60/GroEL (17.2%) Chaperonin Cpn60/GroEL/TCP-1 family (17.2%) Chaperonin Cpn60, conserved site (17.2%)" AMLQDIATLTGGTVISEEIGMELEK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (16.9%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (16.8%) GO:1990220 (0.1%) GO:0005829 (0%)" "GO:0140662 (16.9%) GO:0005524 (16.9%) GO:0016853 (16.8%)" "protein refolding (16.9%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (16.8%) GroEL-GroES complex (0.1%) cytosol (0%)" "ATP-dependent protein folding chaperone (16.9%) ATP binding (16.9%) isomerase activity (16.8%)" "IPR001844 (16.9%) IPR027409 (16.9%) IPR002423 (16.8%)" "Chaperonin Cpn60/GroEL (16.9%) GroEL-like apical domain superfamily (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%)" AIENLSHIKR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000534 (18%) IPR005986 (18%) IPR012280 (18%)" "Semialdehyde dehydrogenase, NAD-binding (18%) Aspartate-semialdehyde dehydrogenase, beta-type (18%) Semialdehyde dehydrogenase, dimerisation domain (18%)" LADCSDKDPQKCELFLVEGDSAGGTAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.6.2.2 (96.6%) 5.99.1.3 (3.4%)" "DNA topoisomerase (ATP-hydrolyzing) (96.6%) Transferred entry: 5.6.2.2 (3.4%)" "GO:0006265 (14.1%) GO:0006261 (10.4%) GO:0032259 (0.5%)" "GO:0005737 (11.5%) GO:0005694 (10.4%)" "GO:0003677 (14.1%) GO:0005524 (14.1%) GO:0046872 (10.4%)" "DNA topological change (14.1%) DNA-templated DNA replication (10.4%) methylation (0.5%)" "cytoplasm (11.5%) chromosome (10.4%)" "DNA binding (14.1%) ATP binding (14.1%) metal ion binding (10.4%)" "IPR000565 (7.7%) IPR001241 (7.7%) IPR006171 (7.7%)" "DNA topoisomerase, type IIA, subunit B (7.7%) DNA topoisomerase, type IIA (7.7%) TOPRIM domain (7.7%)" AEAEALEASGHNLKER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (15.3%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (15.3%)" "IPR001114 (14.7%) IPR027417 (14.7%) IPR033128 (14.7%)" "Adenylosuccinate synthetase (14.7%) P-loop containing nucleoside triphosphate hydrolase (14.7%) Adenylosuccinate synthase, active site (14.7%)" AQAEAAVNAFQDVFVEAMQSGEGLK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0030261 (24%) GO:0005829 (25.3%) "GO:0003677 (25.3%) GO:0030527 (25.3%)" chromosome condensation (24%) cytosol (25.3%) "DNA binding (25.3%) structural constituent of chromatin (25.3%)" "IPR000119 (50%) IPR010992 (50%)" "Histone-like DNA-binding protein (50%) Integration host factor (IHF)-like DNA-binding domain superfamily (50%)" KNVVDFNAMDKDDEE Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" TNDDFFEMMKR root 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.4%) "GO:0005829 (13.7%) GO:0016020 (0%)" "GO:0003723 (14.4%) GO:0005524 (14.4%) GO:0008186 (14.4%)" DNA-templated transcription termination (14.4%) "cytosol (13.7%) membrane (0%)" "RNA binding (14.4%) ATP binding (14.4%) ATP-dependent activity, acting on RNA (14.4%)" "IPR027417 (10.3%) IPR004665 (10.3%) IPR000194 (10.1%)" "P-loop containing nucleoside triphosphate hydrolase (10.3%) Transcription termination factor Rho (10.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%)" AWEEVKPILQSIAAQAPDGTPCCQWVGPAGSGHFVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" ILIPDMALSAAEYFAVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0046034 (33.3%) GO:1902600 (33.3%)" GO:0005524 (33.3%) "ATP metabolic process (33.3%) proton transmembrane transport (33.3%)" ATP binding (33.3%) "IPR000194 (20%) IPR004100 (20%) IPR022879 (20%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (20%) V-type ATP synthase regulatory subunit B/beta (20%)" YTGYPGGQIEYTPADLLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006412 (20%) GO:0017148 (20%)" GO:0022625 (20%) "GO:0003729 (20%) GO:0003735 (20%)" "translation (20%) negative regulation of translation (20%)" cytosolic large ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%)" "IPR005822 (25%) IPR005823 (25%) IPR023563 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13, conserved site (25%)" LHKEVSVEIPFEVVAE Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (19.9%) "GO:0005840 (20.3%) GO:1990904 (19.8%) GO:0022625 (0.2%)" "GO:0003735 (19.9%) GO:0019843 (19.9%)" translation (19.9%) "ribosome (20.3%) ribonucleoprotein complex (19.8%) cytosolic large ribosomal subunit (0.2%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%)" "IPR020069 (14.5%) IPR036791 (14.5%) IPR000244 (14.2%)" "Large ribosomal subunit protein bL9, C-terminal (14.5%) Large ribosomal subunit protein bL9, C-terminal domain superfamily (14.5%) Large ribosomal subunit protein bL9 (14.2%)" IECHTTEAVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.7.1.48 (57.1%) 6.1.1.3 (42.9%)" "uridine/cytidine kinase (57.1%) threonine--tRNA ligase (42.9%)" "GO:0005524 (47.2%) GO:0016301 (41.5%) GO:0004829 (5.7%)" "ATP binding (47.2%) kinase activity (41.5%) threonine-tRNA ligase activity (5.7%)" "IPR006083 (33.3%) IPR018163 (33.3%) IPR027417 (33.3%)" "Phosphoribulokinase/uridine kinase (33.3%) Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" LAVDYSDGIVQNSEHVNEDVMNYAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.4.1.21 (100%) starch synthase (100%) "GO:0016757 (92.9%) GO:0009011 (7.1%)" "glycosyltransferase activity (92.9%) alpha-1,4-glucan glucosyltransferase (ADP-glucose donor) activity (7.1%)" IPR013534 (100%) Starch synthase, catalytic domain (100%) IVFPAVAEAFGWK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.1.1 (100%) alanine dehydrogenase (100%) GO:0042853 (25.6%) GO:0005886 (25.6%) "GO:0000286 (25.6%) GO:0000166 (23.3%)" L-alanine catabolic process (25.6%) plasma membrane (25.6%) "alanine dehydrogenase activity (25.6%) nucleotide binding (23.3%)" "IPR007698 (20%) IPR007886 (20%) IPR008141 (20%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (20%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (20%) Alanine dehydrogenase (20%)" SAIYPLTPEQDAAAR root "1.8.4.11 (99.4%) 1.8.4.- (0.6%)" "peptide-methionine (S)-S-oxide reductase (99.4%) With a disulfide as acceptor (0.6%)" "GO:0034599 (23.7%) GO:0036211 (4%) GO:0006979 (0.2%)" "GO:0005737 (23.7%) GO:0005829 (0.2%)" "GO:0008113 (23.7%) GO:0036456 (23.7%) GO:0016491 (0.5%)" "cellular response to oxidative stress (23.7%) protein modification process (4%) response to oxidative stress (0.2%)" "cytoplasm (23.7%) cytosol (0.2%)" "peptide-methionine (S)-S-oxide reductase activity (23.7%) obsolete L-methionine-(S)-S-oxide reductase activity (23.7%) oxidoreductase activity (0.5%)" "IPR002569 (33.4%) IPR050162 (33.4%) IPR036509 (33.2%)" "Peptide methionine sulphoxide reductase MsrA domain (33.4%) Methionine Sulfoxide Reductase A (33.4%) Peptide methionine sulphoxide reductase MsrA superfamily (33.2%)" KFASQGASLILNAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.- (50%) 1.1.1.381 (50%)" "With NAD(+) or NADP(+) as acceptor (50%) 3-hydroxy acid dehydrogenase (50%)" GO:0016616 (100%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (100%) "IPR002347 (33.3%) IPR020904 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Short-chain dehydrogenase/reductase, conserved site (33.3%) NAD(P)-binding domain superfamily (33.3%)" SIDELIDQTIPANIR root 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.5%) "GO:0005960 (16.5%) GO:0005829 (15.8%) GO:0005739 (0.7%)" "GO:0004375 (16.5%) GO:0016594 (16.5%) GO:0030170 (16.5%)" glycine decarboxylation via glycine cleavage system (16.5%) "glycine cleavage complex (16.5%) cytosol (15.8%) mitochondrion (0.7%)" "glycine dehydrogenase (decarboxylating) activity (16.5%) glycine binding (16.5%) pyridoxal phosphate binding (16.5%)" "IPR015421 (14.4%) IPR015422 (14.4%) IPR015424 (14.4%)" "Pyridoxal phosphate-dependent transferase, major domain (14.4%) Pyridoxal phosphate-dependent transferase, small domain (14.4%) Pyridoxal phosphate-dependent transferase (14.4%)" RDDLLQDESTLNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.3%) GO:0005829 (14.3%) "GO:0003723 (14.3%) GO:0004386 (14.3%) GO:0005524 (14.3%)" DNA-templated transcription termination (14.3%) cytosol (14.3%) "RNA binding (14.3%) helicase activity (14.3%) ATP binding (14.3%)" "IPR000194 (10%) IPR003593 (10%) IPR004665 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) Transcription termination factor Rho (10%)" VQQTGTYSEATKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides DAVKELNPDMSGLDRG Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GSGAYGTFTVTHDITK root 1.11.1.6 (100%) catalase (100%) "GO:0042542 (15.9%) GO:0042744 (15.9%)" "GO:0005737 (15.9%) GO:0042597 (5%)" "GO:0004096 (15.9%) GO:0020037 (15.9%) GO:0046872 (15.6%)" "response to hydrogen peroxide (15.9%) hydrogen peroxide catabolic process (15.9%)" "cytoplasm (15.9%) periplasmic space (5%)" "catalase activity (15.9%) heme binding (15.9%) metal ion binding (15.6%)" "IPR011614 (12.8%) IPR018028 (12.8%) IPR024708 (12.8%)" "Catalase core domain (12.8%) Catalase, mono-functional, haem-containing (12.8%) Catalase active site (12.8%)" DKPEDAVLDVQGIATVTPAIVQACTQDKQANFK root "GO:1990451 (45.5%) GO:0071468 (3%) GO:0061077 (0.7%)" GO:0030288 (47.8%) "GO:0042802 (0.7%) GO:0042803 (0.7%) GO:0044183 (0.7%)" "cellular stress response to acidic pH (45.5%) cellular response to acidic pH (3%) obsolete chaperone-mediated protein folding (0.7%)" outer membrane-bounded periplasmic space (47.8%) "identical protein binding (0.7%) protein homodimerization activity (0.7%) protein folding chaperone (0.7%)" "IPR010486 (25.3%) IPR036831 (25.3%) IPR038303 (25.3%)" "HNS-dependent expression A/B (25.3%) HNS-dependent expression A superfamily (25.3%) HNS-dependent expression A/B superfamily (25.3%)" SLAGYAEIFLR root "6.4.1.3 (66.7%) 6.-.-.- (33.3%)" "propionyl-CoA carboxylase (66.7%) Ligases (33.3%)" "GO:0015977 (22.1%) GO:0006633 (1.8%) GO:0009062 (0.3%)" "GO:0009317 (22.1%) GO:0005739 (1.5%)" "GO:0004658 (23.9%) GO:0003989 (22.1%) GO:0016740 (6.3%)" "carbon fixation (22.1%) fatty acid biosynthetic process (1.8%) fatty acid catabolic process (0.3%)" "acetyl-CoA carboxylase complex (22.1%) mitochondrion (1.5%)" "propionyl-CoA carboxylase activity (23.9%) acetyl-CoA carboxylase activity (22.1%) transferase activity (6.3%)" "IPR011762 (19.8%) IPR029045 (19.8%) IPR034733 (19.8%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (19.8%) ClpP/crotonase-like domain superfamily (19.8%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (19.8%)" SKSSSIVLVAESELTGGAMHYAER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0016208 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) AMP binding (9.1%)" "IPR000023 (16.7%) IPR012003 (16.7%) IPR012828 (16.7%)" "Phosphofructokinase domain (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic (16.7%)" RIINEPTAAALAYGLDNGRTQTVM Gemmiger formicilis Bacteria Bacillati Bacillota Clostridia Eubacteriales Gemmiger Gemmiger formicilis "GO:0005524 (33.3%) GO:0051082 (33.3%) GO:0140662 (33.3%)" "ATP binding (33.3%) unfolded protein binding (33.3%) ATP-dependent protein folding chaperone (33.3%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" SAEHVLTMLNEHEVK root 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (14.6%) GO:0019740 (14.4%) GO:0009314 (0%)" "GO:0005737 (14.4%) GO:0016020 (14.3%) GO:0005829 (0%)" "GO:0004356 (14.6%) GO:0005524 (13.8%) GO:0046872 (13.6%)" "glutamine biosynthetic process (14.6%) nitrogen utilization (14.4%) response to radiation (0%)" "cytoplasm (14.4%) membrane (14.3%) cytosol (0%)" "glutamine synthetase activity (14.6%) ATP binding (13.8%) metal ion binding (13.6%)" "IPR036651 (12.9%) IPR008147 (12.9%) IPR027302 (12.7%)" "Glutamine synthetase, N-terminal domain superfamily (12.9%) Glutamine synthetase, N-terminal domain (12.9%) Glutamine synthetase, N-terminal conserved site (12.7%)" SIKSDGVPEDVEKDAEAEVQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006415 (33.3%) GO:0005737 (33.3%) GO:0043023 (33.3%) translational termination (33.3%) cytoplasm (33.3%) ribosomal large subunit binding (33.3%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" MAICGSCGMMVNNVPK Bacteria Bacteria 1.3.5.1 (100%) succinate dehydrogenase (100%) "GO:0006099 (11.1%) GO:0009061 (11%) GO:0022904 (0.1%)" "GO:0005886 (11%) GO:0045283 (0%) GO:0005829 (0%)" "GO:0009055 (11.1%) GO:0051537 (11.1%) GO:0046872 (11.1%)" "tricarboxylic acid cycle (11.1%) anaerobic respiration (11%) respiratory electron transport chain (0.1%)" "plasma membrane (11%) fumarate reductase complex (0%) cytosol (0%)" "electron transfer activity (11.1%) 2 iron, 2 sulfur cluster binding (11.1%) metal ion binding (11.1%)" "IPR004489 (11.1%) IPR012675 (11.1%) IPR025192 (11.1%)" "Succinate dehydrogenase/fumarate reductase iron-sulphur protein (11.1%) Beta-grasp domain superfamily (11.1%) Succinate dehydogenase/fumarate reductase N-terminal (11.1%)" SKEELFNLR root GO:0006412 (32.9%) "GO:0022625 (32.8%) GO:0005840 (0.3%) GO:0005634 (0.2%)" "GO:0003735 (32.9%) GO:0046872 (0.3%) GO:0004518 (0.2%)" translation (32.9%) "cytosolic large ribosomal subunit (32.8%) ribosome (0.3%) nucleus (0.2%)" "structural constituent of ribosome (32.9%) metal ion binding (0.3%) nuclease activity (0.2%)" "IPR001854 (26%) IPR036049 (26%) IPR050063 (25.9%)" "Large ribosomal subunit protein uL29 (26%) Large ribosomal subunit protein uL29 superfamily (26%) Universal ribosomal protein uL29 (25.9%)" EAEAYDGPSIIIAYAPCINHGLKK Bacteria Bacteria "1.2.7.1 (90.9%) 1.2.7.- (9.1%)" "pyruvate synthase (90.9%) With an iron-sulfur protein as acceptor (9.1%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (12%)" "GO:0005506 (14.7%) GO:0030976 (14.7%) GO:0051539 (14.7%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (12%)" "iron ion binding (14.7%) thiamine pyrophosphate binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" KALEAFFSSVTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" TGYINEEDVPVLDNWR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25%) GO:0044205 (25%)" "GO:0000287 (25%) GO:0004588 (25%)" "pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" "magnesium ion binding (25%) orotate phosphoribosyltransferase activity (25%)" "IPR000836 (25%) IPR004467 (25%) IPR023031 (25%)" "Phosphoribosyltransferase domain (25%) Orotate phosphoribosyl transferase domain (25%) Orotate phosphoribosyltransferase (25%)" RIVNEPTAASLAYGLDK root 1.3.1.74 (100%) 2-alkenal reductase [NAD(P)(+)] (100%) GO:0016226 (0.5%) "GO:0005737 (9.3%) GO:0070013 (0.9%) GO:0009507 (0.5%)" "GO:0005524 (29.8%) GO:0140662 (29.8%) GO:0051082 (28.2%)" iron-sulfur cluster assembly (0.5%) "cytoplasm (9.3%) intracellular organelle lumen (0.9%) chloroplast (0.5%)" "ATP binding (29.8%) ATP-dependent protein folding chaperone (29.8%) unfolded protein binding (28.2%)" "IPR013126 (17%) IPR018181 (17%) IPR043129 (17%)" "Heat shock protein 70 family (17%) Heat shock protein 70, conserved site (17%) ATPase, nucleotide binding domain (17%)" VATYDLKPEMSAYEVKDK Bacteria Bacteria "5.4.2.12 (99.7%) 5.4.2.1 (0.3%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (99.7%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.3%)" "GO:0006007 (20%) GO:0006096 (19.9%) GO:0005975 (0.1%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%) GO:0016853 (0.2%)" "glucose catabolic process (20%) glycolytic process (19.9%) carbohydrate metabolic process (0.1%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%) isomerase activity (0.2%)" "IPR005995 (20.1%) IPR006124 (20.1%) IPR017850 (20.1%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.1%) Metalloenzyme (20.1%) Alkaline-phosphatase-like, core domain superfamily (20.1%)" LIEEIDRLPIELSPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.12.7.2 (75%) 1.12.-.- (25%)" "ferredoxin hydrogenase (75%) Acting on hydrogen as donors (25%)" "GO:0046872 (45.2%) GO:0051539 (26.2%) GO:0051536 (19%)" "metal ion binding (45.2%) 4 iron, 4 sulfur cluster binding (26.2%) iron-sulfur cluster binding (19%)" "IPR004108 (16.7%) IPR009016 (16.7%) IPR017896 (16.7%)" "Iron hydrogenase, large subunit, C-terminal (16.7%) Iron hydrogenase (16.7%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (16.7%)" PVDLTQAAENSVHAVVHIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.4.21.107 (57.1%) 3.4.21.- (42.9%)" "peptidase Do (57.1%) Serine endopeptidases (42.9%)" GO:0006508 (47.9%) "GO:0030313 (2.1%) GO:0042597 (2.1%)" GO:0004252 (47.9%) proteolysis (47.9%) "cell envelope (2.1%) periplasmic space (2.1%)" serine-type endopeptidase activity (47.9%) "IPR001478 (17%) IPR001940 (17%) IPR009003 (17%)" "PDZ domain (17%) Peptidase S1C (17%) Peptidase S1, PA clan (17%)" STVATKETIEFEGETYPLLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR002150 (25%) IPR027493 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL31 type A/B (25%) Large ribosomal subunit protein bL31 type B (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" ILDPLIVGQEHYDVAQR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0045259 (23.3%) GO:0005886 (21.7%)" "GO:0005524 (23.3%) GO:0046933 (23.3%) GO:0016787 (6.7%)" "proton-transporting ATP synthase complex (23.3%) plasma membrane (21.7%)" "ATP binding (23.3%) proton-transporting ATP synthase activity, rotational mechanism (23.3%) hydrolase activity (6.7%)" "IPR000194 (10.4%) IPR005722 (10.4%) IPR020003 (10.4%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.4%) ATP synthase, F1 complex, beta subunit (10.4%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (10.4%)" VRENEPFDVALRR root "GO:0006412 (24.8%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0005840 (25.1%) GO:1990904 (24.9%) GO:0022627 (0%)" "GO:0003735 (24.9%) GO:0016787 (0.2%) GO:0019843 (0%)" "translation (24.8%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (25.1%) ribonucleoprotein complex (24.9%) cytosolic small ribosomal subunit (0%)" "structural constituent of ribosome (24.9%) hydrolase activity (0.2%) rRNA binding (0%)" "IPR001911 (33.4%) IPR018278 (33.3%) IPR038380 (33.3%)" "Small ribosomal subunit protein bS21 (33.4%) Small ribosomal subunit protein bS21, conserved site (33.3%) Small ribosomal subunit protein bS21 superfamily (33.3%)" SLDYLVVNHMEPDHAGSIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0009055 (22.9%) GO:0010181 (22.9%) GO:0016491 (22.9%)" "electron transfer activity (22.9%) FMN binding (22.9%) oxidoreductase activity (22.9%)" "IPR001226 (14.3%) IPR001279 (14.3%) IPR008254 (14.3%)" "Flavodoxin, conserved site (14.3%) Metallo-beta-lactamase (14.3%) Flavodoxin/nitric oxide synthase (14.3%)" EADKVEFLSGIFEGK Bacteroidota Bacteria Pseudomonadati Bacteroidota 4.2.3.5 (100%) chorismate synthase (100%) "GO:0008652 (16.7%) GO:0009073 (16.7%) GO:0009423 (16.7%)" GO:0005829 (16.7%) "GO:0004107 (16.7%) GO:0010181 (16.7%)" "amino acid biosynthetic process (16.7%) aromatic amino acid family biosynthetic process (16.7%) chorismate biosynthetic process (16.7%)" cytosol (16.7%) "chorismate synthase activity (16.7%) FMN binding (16.7%)" "IPR000453 (33.3%) IPR020541 (33.3%) IPR035904 (33.3%)" "Chorismate synthase (33.3%) Chorismate synthase, conserved site (33.3%) Chorismate synthase AroC superfamily (33.3%)" SALTDADLWSAIGWLAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR019707 (50%) IPR036388 (50%)" "MJ1608-like (50%) Winged helix-like DNA-binding domain superfamily (50%)" DMSNDDVFITR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR002150 (25%) IPR027493 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL31 type A/B (25%) Large ribosomal subunit protein bL31 type B (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" IVATVSDQR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (5%) "GO:0000287 (19%) GO:0004743 (19%) GO:0005524 (19%)" response to stress (5%) "magnesium ion binding (19%) pyruvate kinase activity (19%) ATP binding (19%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" MKPIVSIIMGSTSDLPVMEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.99.18 (91.2%) 4.1.1.21 (8.8%)" "5-(carboxyamino)imidazole ribonucleotide mutase (91.2%) phosphoribosylaminoimidazole carboxylase (8.8%)" GO:0006189 (39.7%) GO:0016020 (0.4%) "GO:0034023 (38.8%) GO:0016829 (20.2%) GO:0004638 (0.4%)" 'de novo' IMP biosynthetic process (39.7%) membrane (0.4%) "5-(carboxyamino)imidazole ribonucleotide mutase activity (38.8%) lyase activity (20.2%) phosphoribosylaminoimidazole carboxylase activity (0.4%)" "IPR000031 (33.4%) IPR024694 (33.4%) IPR033747 (33.1%)" "PurE domain (33.4%) PurE, prokaryotic type (33.4%) Class I PurE (33.1%)" TMFADIPAQPNAAER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.24.55 (100%) pitrilysin (100%) GO:0006508 (33.3%) "GO:0004222 (33.3%) GO:0046872 (33.3%)" proteolysis (33.3%) "metalloendopeptidase activity (33.3%) metal ion binding (33.3%)" "IPR001431 (20%) IPR007863 (20%) IPR011249 (20%)" "Peptidase M16, zinc-binding site (20%) Peptidase M16, C-terminal (20%) Metalloenzyme, LuxS/M16 peptidase-like (20%)" SDVLDTFETIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.4%) GO:0000287 (15.9%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.4%) magnesium ion binding (15.9%)" "IPR001114 (14.5%) IPR027417 (14.5%) IPR042111 (14.5%)" "Adenylosuccinate synthetase (14.5%) P-loop containing nucleoside triphosphate hydrolase (14.5%) Adenylosuccinate synthetase, domain 3 (14.5%)" HKLLDVIGDLALIGKPIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.5.1.108 (51.5%) 4.2.1.59 (48%) 4.2.1.- (0.5%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase (51.5%) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (48%) Hydro-lyases (0.5%)" "GO:0009245 (14.4%) GO:0006633 (14%)" "GO:0016020 (14.4%) GO:0005737 (14%)" "GO:0103117 (14.4%) GO:0046872 (14.3%) GO:0019171 (12.8%)" "lipid A biosynthetic process (14.4%) fatty acid biosynthetic process (14%)" "membrane (14.4%) cytoplasm (14%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.4%) metal ion binding (14.3%) (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (12.8%)" "IPR004463 (14.5%) IPR011334 (14.5%) IPR020568 (14.5%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.5%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.5%) Ribosomal protein uS5 domain 2-type superfamily (14.5%)" NIPTGTVVHAIELRPLGGAK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0002181 (20%) "GO:0015934 (20%) GO:0005840 (0.2%)" "GO:0003735 (20%) GO:0016740 (20%) GO:0019843 (17.1%)" cytoplasmic translation (20%) "large ribosomal subunit (20%) ribosome (0.2%)" "structural constituent of ribosome (20%) transferase activity (20%) rRNA binding (17.1%)" "IPR002171 (12.9%) IPR005880 (12.9%) IPR008991 (12.9%)" "Large ribosomal subunit protein uL2 (12.9%) Large ribosomal subunit protein uL2, bacteria/organella (12.9%) Translation protein SH3-like domain superfamily (12.9%)" HTTKPLMGHFKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.3%)" "GO:0003735 (24.9%) GO:0019843 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.3%)" "structural constituent of ribosome (24.9%) rRNA binding (24.9%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" MNNTVLLATVCAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.4%) GO:0006402 (14.4%)" GO:0005829 (14.4%) "GO:0000175 (14.4%) GO:0003723 (14.4%) GO:0004654 (14.4%)" "RNA processing (14.4%) mRNA catabolic process (14.4%)" cytosol (14.4%) "3'-5'-RNA exonuclease activity (14.4%) RNA binding (14.4%) polyribonucleotide nucleotidyltransferase activity (14.4%)" "IPR001247 (8.4%) IPR012162 (8.4%) IPR015847 (8.4%)" "Exoribonuclease, phosphorolytic domain 1 (8.4%) Polyribonucleotide nucleotidyltransferase (8.4%) Exoribonuclease, phosphorolytic domain 2 (8.4%)" QAIEDAAMDLDNEDKNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" LLSENGYDPVYGARPLKR root 3.6.1.15 (100%) nucleoside-triphosphate phosphatase (100%) "GO:0034605 (17.4%) GO:0042026 (14.8%) GO:0006508 (0.2%)" "GO:0005829 (14.3%) GO:0005737 (3.1%) GO:0005759 (0.1%)" "GO:0005524 (17.4%) GO:0016887 (17.4%) GO:0042802 (14.3%)" "cellular response to heat (17.4%) protein refolding (14.8%) proteolysis (0.2%)" "cytosol (14.3%) cytoplasm (3.1%) mitochondrial matrix (0.1%)" "ATP binding (17.4%) ATP hydrolysis activity (17.4%) identical protein binding (14.3%)" "IPR019489 (9.1%) IPR027417 (9.1%) IPR050130 (9%)" "Clp ATPase, C-terminal (9.1%) P-loop containing nucleoside triphosphate hydrolase (9.1%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (9%)" CHSIMNCVSVCPK root "1.3.5.1 (99.6%) 1.3.99.1 (0.3%) 1.3.5.4 (0.1%)" "succinate dehydrogenase (99.6%) Deleted entry (0.3%) Transferred entry: 1.3.5.1 (0.1%)" "GO:0022904 (12.5%) GO:0006099 (12.5%) GO:0009060 (0.1%)" "GO:0005743 (0%) GO:0005886 (0%) GO:0016020 (0%)" "GO:0051539 (12.5%) GO:0046872 (12.5%) GO:0051537 (12.5%)" "respiratory electron transport chain (12.5%) tricarboxylic acid cycle (12.5%) aerobic respiration (0.1%)" "mitochondrial inner membrane (0%) plasma membrane (0%) membrane (0%)" "4 iron, 4 sulfur cluster binding (12.5%) metal ion binding (12.5%) 2 iron, 2 sulfur cluster binding (12.5%)" "IPR009051 (11.4%) IPR050573 (11.3%) IPR004489 (11.3%)" "Alpha-helical ferredoxin (11.4%) Succinate Dehydrogenase/Fumarate Reductase Iron-Sulfur (11.3%) Succinate dehydrogenase/fumarate reductase iron-sulphur protein (11.3%)" VCYDLSPKPNATIEWE Bacteria Bacteria 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (31.6%) "GO:0003921 (31.6%) GO:0005524 (31.6%) GO:0016740 (5.1%)" cytosol (31.6%) "GMP synthase activity (31.6%) ATP binding (31.6%) transferase activity (5.1%)" "IPR001674 (17.3%) IPR014729 (17.3%) IPR025777 (17.3%)" "GMP synthase, C-terminal (17.3%) Rossmann-like alpha/beta/alpha sandwich fold (17.3%) GMP synthetase ATP pyrophosphatase domain (17.3%)" ANATTPVEAENK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "6.4.1.7 (75%) 6.4.1.1 (25%)" "2-oxoglutarate carboxylase (75%) pyruvate carboxylase (25%)" "GO:0004736 (80.8%) GO:0034029 (15.4%) GO:0003824 (3.8%)" "pyruvate carboxylase activity (80.8%) 2-oxoglutarate carboxylase activity (15.4%) catalytic activity (3.8%)" "IPR000089 (14.6%) IPR011053 (14.6%) IPR050709 (14.6%)" "Biotin/lipoyl attachment (14.6%) Single hybrid motif (14.6%) Biotin Carboxyl Carrier/Decarboxylase Components (14.6%)" VTYTEPGLKGDTATNTLKPATVESGATVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043043 (33.3%) "GO:0005829 (31.4%) GO:0005737 (2%)" GO:0003746 (33.3%) peptide biosynthetic process (33.3%) "cytosol (31.4%) cytoplasm (2%)" translation elongation factor activity (33.3%) "IPR001059 (11.1%) IPR008991 (11.1%) IPR011768 (11.1%)" "Translation elongation factor P/YeiP, central (11.1%) Translation protein SH3-like domain superfamily (11.1%) Translation elongation factor P (11.1%)" IKEFIDNPYNDEHKPERVEADVPFFGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015031 (33.3%) GO:0005886 (33.3%) GO:0022857 (33.3%) protein transport (33.3%) plasma membrane (33.3%) transmembrane transporter activity (33.3%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) TVPGKEENVVEHFIANR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" EFNIIAETGIHARPATLLVQAASK Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus GO:0009401 (48.2%) GO:0005737 (48.2%) GO:0016740 (3.6%) phosphoenolpyruvate-dependent sugar phosphotransferase system (48.2%) cytoplasm (48.2%) transferase activity (3.6%) "IPR000032 (20%) IPR001020 (20%) IPR002114 (20%)" "Phosphocarrier protein HPr-like (20%) Phosphotransferase system, HPr histidine phosphorylation site (20%) Phosphotransferase system, HPr serine phosphorylation site (20%)" LGREDIIVIAGGVIPAQDYDFLYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006158 (16.8%) IPR006159 (16.8%) IPR036724 (16.8%)" "Cobalamin (vitamin B12)-binding domain (16.8%) Methylmalonyl-CoA mutase, C-terminal (16.8%) Cobalamin-binding domain superfamily (16.8%)" IIEEIRPFITGEFTVTDIKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR027848 (100%) Protein of unknown function DUF4494 (100%) AVLGANPCPVVIPIGAEENFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0032790 (20.2%) GO:0005737 (19.1%) "GO:0003746 (20.2%) GO:0003924 (20.2%) GO:0005525 (20.2%)" ribosome disassembly (20.2%) cytoplasm (19.1%) "translation elongation factor activity (20.2%) GTPase activity (20.2%) GTP binding (20.2%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" LINEYPIDSIEDGMSENDWEGWK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.5%) "GO:0000015 (16.5%) GO:0005576 (16.5%) GO:0009986 (16.5%)" "GO:0000287 (16.5%) GO:0004634 (16.5%) GO:0016829 (0.9%)" glycolytic process (16.5%) "phosphopyruvate hydratase complex (16.5%) extracellular region (16.5%) cell surface (16.5%)" "magnesium ion binding (16.5%) phosphopyruvate hydratase activity (16.5%) lyase activity (0.9%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" ALQPGEALLLENLR Pseudomonadati Bacteria Pseudomonadati 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (32.2%) IPR015824 (32.2%) IPR036043 (32.2%)" "Phosphoglycerate kinase (32.2%) Phosphoglycerate kinase, N-terminal (32.2%) Phosphoglycerate kinase superfamily (32.2%)" ALLMHGTEGEVYANPQR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.4.2.18 (100%) anthranilate phosphoribosyltransferase (100%) GO:0000162 (26.2%) GO:0005829 (26.2%) "GO:0004048 (26.2%) GO:0003677 (21.1%) GO:0016757 (0.2%)" L-tryptophan biosynthetic process (26.2%) cytosol (26.2%) "anthranilate phosphoribosyltransferase activity (26.2%) DNA binding (21.1%) glycosyltransferase activity (0.2%)" "IPR035902 (25.1%) IPR005940 (25.1%) IPR017459 (24.6%)" "Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily (25.1%) Anthranilate phosphoribosyl transferase (25.1%) Glycosyl transferase family 3, N-terminal domain (24.6%)" HFDEVVGFSYLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.1.21.2 (100%) deoxyribonuclease IV (100%) GO:0006284 (16.7%) "GO:0003677 (16.7%) GO:0003906 (16.7%) GO:0008081 (16.7%)" base-excision repair (16.7%) "DNA binding (16.7%) DNA-(apurinic or apyrimidinic site) endonuclease activity (16.7%) phosphoric diester hydrolase activity (16.7%)" "IPR001719 (25%) IPR013022 (25%) IPR018246 (25%)" "AP endonuclease 2 (25%) Xylose isomerase-like, TIM barrel domain (25%) AP endonuclease 2, zinc binding site (25%)" EACAAANVLLK root "4.1.2.4 (99.7%) 4.-.-.- (0.3%)" "deoxyribose-phosphate aldolase (99.7%) Lyases (0.3%)" "GO:0009264 (20.1%) GO:0016052 (20%) GO:0006018 (18.6%)" "GO:0005737 (20%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0004139 (20.1%) GO:0016829 (0.5%) GO:0004645 (0.1%)" "deoxyribonucleotide catabolic process (20.1%) carbohydrate catabolic process (20%) 2-deoxyribose 1-phosphate catabolic process (18.6%)" "cytoplasm (20%) cytosol (0.1%) membrane (0.1%)" "deoxyribose-phosphate aldolase activity (20.1%) lyase activity (0.5%) 1,4-alpha-oligoglucan phosphorylase activity (0.1%)" "IPR002915 (25.2%) IPR011343 (25.2%) IPR013785 (25.2%)" "DeoC/FbaB/LacD aldolase (25.2%) Deoxyribose-phosphate aldolase (25.2%) Aldolase-type TIM barrel (25.2%)" HGTSCVKFDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.4.1.13 (100%) cysteine-S-conjugate beta-lyase (100%) "GO:0016829 (40%) GO:0030170 (40%) GO:0008483 (20%)" "lyase activity (40%) pyridoxal phosphate binding (40%) transaminase activity (20%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" SVEGLGQADPIGNNDTAEGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0016020 (100%) membrane (100%) "IPR006665 (25%) IPR036737 (25%) IPR039567 (25%)" "OmpA-like domain (25%) OmpA-like domain superfamily (25%) Glycine zipper domain (25%)" LVNEHDLAEALNNYK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.29 (100%) glycerate dehydrogenase (100%) "GO:0051287 (50%) GO:0016616 (37.5%) GO:0008465 (9.4%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (37.5%) hydroxypyruvate reductase (NADH) activity (9.4%)" "IPR006139 (20%) IPR006140 (20%) IPR029753 (20%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (20%)" GVLVVMNDTVLDGRDVTK root 3.5.1.1 (100%) asparaginase (100%) "GO:0006528 (32.7%) GO:0006530 (0.4%) GO:0051289 (0.2%)" "GO:0042597 (30.9%) GO:0030313 (0.4%) GO:0030288 (0.2%)" "GO:0004067 (34.2%) GO:0016787 (0.7%) GO:0042802 (0.2%)" "asparagine metabolic process (32.7%) L-asparagine catabolic process (0.4%) protein homotetramerization (0.2%)" "periplasmic space (30.9%) cell envelope (0.4%) outer membrane-bounded periplasmic space (0.2%)" "asparaginase activity (34.2%) hydrolase activity (0.7%) identical protein binding (0.2%)" "IPR006034 (11.6%) IPR027474 (11.6%) IPR036152 (11.6%)" "Asparaginase/glutaminase-like (11.6%) L-asparaginase, N-terminal (11.6%) Asparaginase/glutaminase-like superfamily (11.6%)" GLTDAAQQVVAAVEGK Bacteria Bacteria 6.2.1.5 (100%) succinate--CoA ligase (ADP-forming) (100%) "GO:0006099 (13.3%) GO:0006104 (13.3%)" "GO:0005829 (13.3%) GO:0042709 (13.3%) GO:0005737 (0.1%)" "GO:0004775 (13.7%) GO:0000287 (12.2%) GO:0005524 (12.2%)" "tricarboxylic acid cycle (13.3%) succinyl-CoA metabolic process (13.3%)" "cytosol (13.3%) succinate-CoA ligase complex (13.3%) cytoplasm (0.1%)" "succinate-CoA ligase (ADP-forming) activity (13.7%) magnesium ion binding (12.2%) ATP binding (12.2%)" "IPR016102 (15.4%) IPR005811 (15.1%) IPR017866 (14.5%)" "Succinyl-CoA synthetase-like (15.4%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (15.1%) Succinyl-CoA synthetase, beta subunit, conserved site (14.5%)" LIDADMYWHMQKDDHNFMVDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) GO:0005737 (20%) "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (20%)" glycogen biosynthetic process (20%) cytoplasm (20%) "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (20%)" "IPR004193 (12.5%) IPR006047 (12.5%) IPR006048 (12.5%)" "Glycoside hydrolase, family 13, N-terminal (12.5%) Glycosyl hydrolase family 13, catalytic domain (12.5%) Alpha-amylase/branching enzyme, C-terminal all beta (12.5%)" IFGPVKDYECHCGK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) "GO:0000428 (16.8%) GO:0031981 (0%)" "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0000287 (16%)" DNA-templated transcription (16.8%) "DNA-directed RNA polymerase complex (16.8%) nuclear lumen (0%)" "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) magnesium ion binding (16%)" "IPR007080 (9.1%) IPR044893 (9.1%) IPR045867 (9.1%)" "RNA polymerase Rpb1, domain 1 (9.1%) RNA polymerase Rpb1, clamp domain superfamily (9.1%) DNA-directed RNA polymerase, subunit beta-prime (9.1%)" QNFSQEVINVICNYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.3.3 (100%) N-acetylneuraminate lyase (100%) GO:0005737 (50%) "GO:0016829 (41.7%) GO:0008747 (8.3%)" cytoplasm (50%) "lyase activity (41.7%) N-acetylneuraminate lyase activity (8.3%)" "IPR002220 (50%) IPR013785 (50%)" "DapA-like (50%) Aldolase-type TIM barrel (50%)" GFIETLENHLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" MALTNNAYFMHCLPVRR Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.1.3.11 (84.7%) 2.1.3.9 (15.3%)" "N-succinylornithine carbamoyltransferase (84.7%) N-acetylornithine carbamoyltransferase (15.3%)" "GO:0019240 (24.5%) GO:0042450 (24.5%)" "GO:0004585 (24.5%) GO:0016597 (24.5%) GO:0043857 (1.9%)" "citrulline biosynthetic process (24.5%) L-arginine biosynthetic process via ornithine (24.5%)" "ornithine carbamoyltransferase activity (24.5%) amino acid binding (24.5%) N-acetylornithine carbamoyltransferase activity (1.9%)" "IPR006130 (20%) IPR006131 (20%) IPR006132 (20%)" "Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20%)" ASEALEGLKGDNEDETTGIEIIKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.7%) GO:0005737 (15.6%) "GO:0005524 (17.7%) GO:0140662 (17.7%) GO:0016853 (15.6%)" protein refolding (17.7%) cytoplasm (15.6%) "ATP binding (17.7%) ATP-dependent protein folding chaperone (17.7%) isomerase activity (15.6%)" "IPR001844 (17.3%) IPR002423 (17.3%) IPR018370 (17.3%)" "Chaperonin Cpn60/GroEL (17.3%) Chaperonin Cpn60/GroEL/TCP-1 family (17.3%) Chaperonin Cpn60, conserved site (17.3%)" DATAAVDAVFGSIQDSLSK Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus "GO:0006270 (11%) GO:0010467 (11%) GO:0030261 (11%)" "GO:0005829 (11%) GO:1990103 (11%) GO:1990178 (11%)" "GO:0003677 (11.9%) GO:0030527 (11%) GO:0042802 (11%)" "DNA replication initiation (11%) gene expression (11%) chromosome condensation (11%)" "cytosol (11%) DnaA-HU complex (11%) HU-DNA complex (11%)" "DNA binding (11.9%) structural constituent of chromatin (11%) identical protein binding (11%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" GFIEQLTAHCEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (19.9%) GO:0006096 (19.9%)" GO:0005829 (19.9%) "GO:0004619 (19.9%) GO:0030145 (19.9%) GO:0016853 (0.3%)" "glucose catabolic process (19.9%) glycolytic process (19.9%)" cytosol (19.9%) "phosphoglycerate mutase activity (19.9%) manganese ion binding (19.9%) isomerase activity (0.3%)" "IPR005995 (20.1%) IPR011258 (20.1%) IPR036646 (20.1%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.1%) BPG-independent PGAM, N-terminal (20.1%) BPG-independent phosphoglycerate mutase, domain B superfamily (20.1%)" AYYHETVEILEEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20.3%) IPR013785 (20.3%) IPR035990 (20.3%)" "Triosephosphate isomerase (20.3%) Aldolase-type TIM barrel (20.3%) Triosephosphate isomerase superfamily (20.3%)" EAVLGEYAGGNKVIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005524 (24.6%) GO:0016887 (24.6%) GO:0051082 (24.6%)" "ATP binding (24.6%) ATP hydrolysis activity (24.6%) unfolded protein binding (24.6%)" "IPR001404 (20%) IPR019805 (20%) IPR020568 (20%)" "Heat shock protein Hsp90 family (20%) Heat shock protein Hsp90, conserved site (20%) Ribosomal protein uS5 domain 2-type superfamily (20%)" SGDTITVAYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (32.7%) "GO:0022625 (30.9%) GO:0005840 (1.8%) GO:1990904 (1.8%)" GO:0003735 (32.7%) translation (32.7%) "cytosolic large ribosomal subunit (30.9%) ribosome (1.8%) ribonucleoprotein complex (1.8%)" structural constituent of ribosome (32.7%) "IPR001857 (26.5%) IPR008991 (26.5%) IPR038657 (25.7%)" "Large ribosomal subunit protein bL19 (26.5%) Translation protein SH3-like domain superfamily (26.5%) Large ribosomal subunit protein bL19 superfamily (25.7%)" LYTPQEISAMILQK root "GO:0042026 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (7%) GO:0070013 (0.7%)" "GO:0005524 (30.8%) GO:0140662 (30.8%) GO:0051082 (30.2%)" "protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (7%) intracellular organelle lumen (0.7%)" "ATP binding (30.8%) ATP-dependent protein folding chaperone (30.8%) unfolded protein binding (30.2%)" "IPR013126 (16.9%) IPR043129 (16.8%) IPR018181 (16.8%)" "Heat shock protein 70 family (16.9%) ATPase, nucleotide binding domain (16.8%) Heat shock protein 70, conserved site (16.8%)" IKGENEPGTEAMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.1.31 (100%) 6-phosphogluconolactonase (100%) "GO:0005975 (33.3%) GO:0006098 (33.3%)" GO:0017057 (33.3%) "carbohydrate metabolic process (33.3%) pentose-phosphate shunt (33.3%)" 6-phosphogluconolactonase activity (33.3%) "IPR005900 (25%) IPR006148 (25%) IPR037171 (25%)" "6-phosphogluconolactonase, DevB-type (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) NagB/RpiA transferase-like (25%)" AAPSYEELSNSQELLETGIK root "7.1.2.2 (97%) 3.6.3.14 (3%)" "H(+)-transporting two-sector ATPase (97%) Transferred entry: 7.1.2.2 (3%)" GO:0042777 (0%) "GO:0045259 (24.1%) GO:0005886 (22.8%) GO:0016020 (0%)" "GO:0005524 (24.1%) GO:0046933 (24.1%) GO:0016787 (3%)" proton motive force-driven plasma membrane ATP synthesis (0%) "proton-transporting ATP synthase complex (24.1%) plasma membrane (22.8%) membrane (0%)" "ATP binding (24.1%) proton-transporting ATP synthase activity, rotational mechanism (24.1%) hydrolase activity (3%)" "IPR027417 (11.5%) IPR050053 (11.5%) IPR000194 (11.4%)" "P-loop containing nucleoside triphosphate hydrolase (11.5%) ATPase alpha/beta chains (11.5%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11.4%)" EADPELQIVAFKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0005737 (48.4%) GO:0003746 (51.6%) cytoplasm (48.4%) translation elongation factor activity (51.6%) "IPR001816 (20.5%) IPR014039 (20.5%) IPR036402 (20.5%)" "Translation elongation factor EFTs/EF1B (20.5%) Translation elongation factor EFTs/EF1B, dimerisation (20.5%) Elongation factor Ts, dimerisation domain superfamily (20.5%)" KIVTEGDKSSVVNNPTGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0006412 (85.1%) "GO:0005840 (12.2%) GO:0005829 (1.4%)" GO:0043024 (1.4%) translation (85.1%) "ribosome (12.2%) cytosol (1.4%)" ribosomal small subunit binding (1.4%) IPR012607 (100%) Ribosome hibernation factor SRA (100%) MKTTPFTDVHIALGAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (16.1%) GO:0032259 (8.8%) GO:0006546 (0.4%)" "GO:0005829 (16.5%) GO:0005960 (16.5%)" "GO:0004047 (16.5%) GO:0008483 (16.5%) GO:0008168 (8.8%)" "glycine decarboxylation via glycine cleavage system (16.1%) methylation (8.8%) glycine catabolic process (0.4%)" "cytosol (16.5%) glycine cleavage complex (16.5%)" "aminomethyltransferase activity (16.5%) transaminase activity (16.5%) methyltransferase activity (8.8%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" GKTEMWYVVGADEGAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (16.7%) IPR014628 (16.7%) IPR014710 (16.7%)" "RmlC-like cupin domain superfamily (16.7%) Mannose-6-phosphate isomerase, Firmicutes type, short form (16.7%) RmlC-like jelly roll fold (16.7%)" LYEVSCEELDFLNDLAKECGVTGSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10.3%) IPR006203 (10.3%) IPR006204 (10.3%)" "Galactokinase (10.3%) GHMP kinase, ATP-binding, conserved site (10.3%) GHMP kinase N-terminal domain (10.3%)" AKGYASNAANFEETHNVVAEIVKDFGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) GO:0006633 (33.3%) "GO:0004316 (33.3%) GO:0051287 (33.3%)" fatty acid biosynthetic process (33.3%) "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33.3%) NAD binding (33.3%)" "IPR002347 (16.7%) IPR011284 (16.7%) IPR020904 (16.7%)" "Short-chain dehydrogenase/reductase SDR (16.7%) 3-oxoacyl-(acyl-carrier-protein) reductase (16.7%) Short-chain dehydrogenase/reductase, conserved site (16.7%)" VDIALPCATQNELNEADAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006537 (26.3%) GO:0005829 (23.7%) "GO:0004354 (26.3%) GO:0000166 (23.7%)" glutamate biosynthetic process (26.3%) cytosol (23.7%) "glutamate dehydrogenase (NADP+) activity (26.3%) nucleotide binding (23.7%)" "IPR006095 (12.5%) IPR006096 (12.5%) IPR006097 (12.5%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.5%)" VADVVNENSEVPYVDAFFTEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000297 (25%) IPR027304 (25%) IPR046357 (25%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (25%) Trigger factor/SurA domain superfamily (25%) Peptidyl-prolyl cis-trans isomerase domain superfamily (25%)" SAEAAIQAAGGTVVKL Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR001196 (20%) IPR005749 (20%) IPR021131 (20%)" "Large ribosomal subunit protein uL15, conserved site (20%) Large ribosomal subunit protein uL15, bacteria (20%) Large ribosomal subunit protein uL15/eL18 (20%)" AGENVGVLLR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0070125 (0.3%) GO:0006414 (0%) GO:0046677 (0%)" "GO:0005829 (17.7%) GO:0032045 (9%) GO:0005886 (0.7%)" "GO:0003746 (18.3%) GO:0005525 (18.1%) GO:0003924 (12.9%)" "mitochondrial translational elongation (0.3%) translational elongation (0%) response to antibiotic (0%)" "cytosol (17.7%) guanyl-nucleotide exchange factor complex (9%) plasma membrane (0.7%)" "translation elongation factor activity (18.3%) GTP binding (18.1%) GTPase activity (12.9%)" "IPR050055 (10.8%) IPR009000 (10.8%) IPR004161 (10.5%)" "Elongation factor Tu GTPase (10.8%) Translation protein, beta-barrel domain superfamily (10.8%) Translation elongation factor EFTu-like, domain 2 (10.5%)" TGCDSLAISIGTSHGAYK Bacteria Bacteria "4.1.2.13 (98.5%) 4.1.2.- (1.5%)" "fructose-bisphosphate aldolase (98.5%) Aldehyde-lyases (1.5%)" "GO:0006096 (23.4%) GO:0030388 (23.4%) GO:0005975 (2%)" GO:0016020 (0.1%) "GO:0008270 (25.4%) GO:0004332 (24%) GO:0016832 (1.5%)" "glycolytic process (23.4%) fructose 1,6-bisphosphate metabolic process (23.4%) carbohydrate metabolic process (2%)" membrane (0.1%) "zinc ion binding (25.4%) fructose-bisphosphate aldolase activity (24%) aldehyde-lyase activity (1.5%)" "IPR000771 (25.5%) IPR013785 (25.5%) IPR050246 (25.5%)" "Fructose-bisphosphate aldolase, class-II (25.5%) Aldolase-type TIM barrel (25.5%) Class II Fructose-bisphosphate Aldolase (25.5%)" VKGLIEEMASAYEDPKEVIEFYSK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.6%) GO:0051301 (12.4%) GO:0043335 (12.1%)" "GO:0005737 (12.4%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003755 (12.6%) GO:0043022 (12.1%) GO:0044183 (12.1%)" "protein transport (12.6%) cell division (12.4%) protein unfolding (12.1%)" "cytoplasm (12.4%) cytosol (0%) membrane (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.6%) ribosome binding (12.1%) protein folding chaperone (12.1%)" "IPR008880 (12.7%) IPR027304 (12.7%) IPR037041 (12.7%)" "Trigger factor, C-terminal (12.7%) Trigger factor/SurA domain superfamily (12.7%) Trigger factor, C-terminal domain superfamily (12.7%)" SSFNRPNLYYEVRPK root "5.6.2.4 (90.5%) 3.6.4.12 (8.7%) 3.6.1.- (0.9%)" "DNA 3'-5' helicase (90.5%) DNA helicase (8.7%) In phosphorus-containing anhydrides (0.9%)" "GO:0006281 (8.3%) GO:0006310 (8.3%) GO:0006260 (8%)" "GO:0005737 (8.4%) GO:0030894 (8.3%) GO:0043590 (8.3%)" "GO:0016787 (8.4%) GO:0009378 (8.4%) GO:0043138 (8.4%)" "DNA repair (8.3%) DNA recombination (8.3%) DNA replication (8%)" "cytoplasm (8.4%) replisome (8.3%) bacterial nucleoid (8.3%)" "hydrolase activity (8.4%) four-way junction helicase activity (8.4%) 3'-5' DNA helicase activity (8.4%)" "IPR004589 (7.4%) IPR027417 (7.4%) IPR011545 (7.3%)" "DNA helicase, ATP-dependent, RecQ type (7.4%) P-loop containing nucleoside triphosphate hydrolase (7.4%) DEAD/DEAH-box helicase domain (7.3%)" IGFTPDEEVGR Bacteria Bacteria 3.4.11.4 (100%) tripeptide aminopeptidase (100%) "GO:0006508 (17.1%) GO:0043171 (12%) GO:0006518 (5.1%)" "GO:0005829 (12.4%) GO:0005737 (2%)" "GO:0008270 (17.1%) GO:0045148 (17.1%) GO:0008237 (17%)" "proteolysis (17.1%) peptide catabolic process (12%) peptide metabolic process (5.1%)" "cytosol (12.4%) cytoplasm (2%)" "zinc ion binding (17.1%) tripeptide aminopeptidase activity (17.1%) metallopeptidase activity (17%)" "IPR001261 (20.1%) IPR010161 (20.1%) IPR011650 (20.1%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20.1%) Peptidase M20B, tripeptide aminopeptidase (20.1%) Peptidase M20, dimerisation domain (20.1%)" SGDADGEIAGAQNTTGNVLRPALQIIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0016407 (57.1%) GO:0008959 (42.9%)" "acetyltransferase activity (57.1%) phosphate acetyltransferase activity (42.9%)" "IPR002505 (16.7%) IPR004614 (16.7%) IPR012147 (16.7%)" "Phosphate acetyl/butaryl transferase (16.7%) Phosphate acetyltransferase (16.7%) Phosphate acetyl/butyryltransferase (16.7%)" TACTYNNIPLER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (31.5%) GO:0006044 (31.5%)" "GO:0004342 (32.4%) GO:0016853 (4.5%)" "carbohydrate metabolic process (31.5%) N-acetylglucosamine metabolic process (31.5%)" "glucosamine-6-phosphate deaminase activity (32.4%) isomerase activity (4.5%)" "IPR003737 (14.7%) IPR024078 (14.7%) IPR052960 (14.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.7%) Putative deacetylase LmbE-like domain superfamily (14.7%) Glucosamine-6-phosphate deaminase-like (14.7%)" LAVITPEKEVKPGSEVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004825 (16.7%) GO:0005524 (16.7%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) methionine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR001412 (8.3%) IPR002547 (8.3%) IPR004495 (8.3%)" "Aminoacyl-tRNA synthetase, class I, conserved site (8.3%) tRNA-binding domain (8.3%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.3%)" FKIEPNEDIHVNDLIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004818 (16.7%) GO:0005524 (16.7%)" glutamyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR000924 (9.8%) IPR001412 (9.8%) IPR004527 (9.8%)" "Glutamyl/glutaminyl-tRNA synthetase (9.8%) Aminoacyl-tRNA synthetase, class I, conserved site (9.8%) Glutamate-tRNA ligase, bacterial/mitochondrial (9.8%)" LSEEGIGMETIDEIER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (25%) IPR018211 (25%) IPR044731 (25%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (25%) Alcohol dehydrogenase, iron-type, conserved site (25%) Butanol dehydrogenase-like (25%)" AINQSFAQSPYLTNK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR025411 (100%) Domain of unknown function DUF4136 (100%) MGAEVFHSLKK Bacteria Bacteria 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0005576 (16.7%) GO:0000015 (16.5%) GO:0009986 (16.5%)" "GO:0004634 (16.7%) GO:0000287 (16.5%) GO:0046872 (0.1%)" glycolytic process (16.7%) "extracellular region (16.7%) phosphopyruvate hydratase complex (16.5%) cell surface (16.5%)" "phosphopyruvate hydratase activity (16.7%) magnesium ion binding (16.5%) metal ion binding (0.1%)" "IPR020810 (16.8%) IPR036849 (16.8%) IPR000941 (16.6%)" "Enolase, C-terminal TIM barrel domain (16.8%) Enolase-like, C-terminal domain superfamily (16.8%) Enolase (16.6%)" GSSLIGTVPDAVQVGPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.21.- (100%) Serine endopeptidases (100%) GO:0006508 (32.8%) GO:0005737 (32.8%) "GO:0008236 (32.8%) GO:0003743 (1.6%)" proteolysis (32.8%) cytoplasm (32.8%) "serine-type peptidase activity (32.8%) translation initiation factor activity (1.6%)" "IPR005151 (12.5%) IPR011659 (12.5%) IPR012393 (12.5%)" "Tail specific protease (12.5%) WD40-like beta-propeller (12.5%) Tricorn protease (12.5%)" TAAASIAFGYHNHDFEFR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016853 (100%) isomerase activity (100%) "IPR013022 (25.8%) IPR036237 (25.8%) IPR050312 (25.8%)" "Xylose isomerase-like, TIM barrel domain (25.8%) Xylose isomerase-like superfamily (25.8%) IolE/XylA/MocC-like (25.8%)" ALLLKEDEIVIDR root "2.7.3.9 (99.9%) 2.7.-.- (0.1%)" "phosphoenolpyruvate--protein phosphotransferase (99.9%) Transferring phosphorus-containing groups (0.1%)" "GO:0009401 (20.3%) GO:0015764 (0.1%)" "GO:0005737 (19.6%) GO:0005829 (0%)" "GO:0008965 (20.4%) GO:0016301 (19.7%) GO:0046872 (19.7%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (20.3%) N-acetylglucosamine transport (0.1%)" "cytoplasm (19.6%) cytosol (0%)" "phosphoenolpyruvate-protein phosphotransferase activity (20.4%) kinase activity (19.7%) metal ion binding (19.7%)" "IPR008731 (8.6%) IPR036618 (8.6%) IPR050499 (8.4%)" "Phosphotransferase system, enzyme I N-terminal (8.6%) PtsI, HPr-binding domain superfamily (8.6%) Phosphoenolpyruvate-dependent sugar PTS enzyme (8.4%)" GLAEDATDEEKAAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" YDVSFSIQKPSTDTVAAAMDNTPFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" DMTSGCTAQACNLRDNYAELR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) "GO:0034599 (25%) GO:0045454 (25%)" GO:0005737 (25%) GO:0008379 (25%) "cellular response to oxidative stress (25%) cell redox homeostasis (25%)" cytoplasm (25%) thioredoxin peroxidase activity (25%) "IPR000866 (20%) IPR013766 (20%) IPR024706 (20%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (20%) Thioredoxin domain (20%) Peroxiredoxin, AhpC-type (20%)" REDFGAMVNVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20%) GO:0005737 (19.7%) "GO:0003676 (20%) GO:0004816 (20%) GO:0005524 (20%)" asparaginyl-tRNA aminoacylation (20%) cytoplasm (19.7%) "nucleic acid binding (20%) asparagine-tRNA ligase activity (20%) ATP binding (20%)" "IPR002312 (14.3%) IPR004364 (14.3%) IPR004365 (14.3%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.3%) Aminoacyl-tRNA synthetase, class II (D/K/N) (14.3%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (14.3%)" FEGEVAVEDGALIVNGNK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.1.- (93.3%) 1.2.1.12 (6.7%)" "With NAD(+) or NADP(+) as acceptor (93.3%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (6.7%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (11.9%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (11.9%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" EVNELATILKEEYGIEPAAAAVAVAAGPAAGAAAAEEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" GKDADILILDQDLNIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (34.7%) "GO:0008448 (34.7%) GO:0046872 (30.6%)" N-acetylglucosamine catabolic process (34.7%) "N-acetylglucosamine-6-phosphate deacetylase activity (34.7%) metal ion binding (30.6%)" "IPR003764 (25%) IPR006680 (25%) IPR011059 (25%)" "N-acetylglucosamine-6-phosphate deacetylase (25%) Amidohydrolase-related (25%) Metal-dependent hydrolase, composite domain superfamily (25%)" EAIDYLTSQGEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.7.1 (75%) 1.2.7.- (25%)" "pyruvate synthase (75%) With an iron-sulfur protein as acceptor (25%)" "GO:0006979 (15.3%) GO:0022900 (15.3%) GO:0044281 (8.5%)" "GO:0005506 (15.3%) GO:0030976 (15.3%) GO:0051539 (15.3%)" "response to oxidative stress (15.3%) electron transport chain (15.3%) small molecule metabolic process (8.5%)" "iron ion binding (15.3%) thiamine pyrophosphate binding (15.3%) 4 iron, 4 sulfur cluster binding (15.3%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" AIDALEGMKGDNEDETTGIEIVKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" MVDLNCFTIEAAMTMVAGTAR TKNNPVIIGEPGVGK root "3.4.21.92 (72.7%) 3.4.-.- (18.2%) 3.4.21.- (9.1%)" "endopeptidase Clp (72.7%) Acting on peptide bonds (peptidases) (18.2%) Serine endopeptidases (9.1%)" "GO:0034605 (18%) GO:0042026 (12.7%) GO:0006508 (5.1%)" "GO:0005737 (14.5%) GO:0005829 (3.3%) GO:0009507 (0.4%)" "GO:0005524 (18.3%) GO:0016887 (18.2%) GO:0008233 (5.1%)" "cellular response to heat (18%) protein refolding (12.7%) proteolysis (5.1%)" "cytoplasm (14.5%) cytosol (3.3%) chloroplast (0.4%)" "ATP binding (18.3%) ATP hydrolysis activity (18.2%) peptidase activity (5.1%)" "IPR050130 (8.6%) IPR027417 (8.6%) IPR003959 (8.5%)" "ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%) P-loop containing nucleoside triphosphate hydrolase (8.6%) ATPase, AAA-type, core (8.5%)" KKKLPVTTLLR Pseudomonadati Bacteria Pseudomonadati 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.9%) GO:0006508 (0.4%)" "GO:0000428 (19.9%) GO:0016020 (0%)" "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (19.8%)" "DNA-templated transcription (19.9%) proteolysis (0.4%)" "DNA-directed RNA polymerase complex (19.9%) membrane (0%)" "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (19.8%)" "IPR007642 (7.9%) IPR015712 (7.9%) IPR007644 (7.8%)" "RNA polymerase Rpb2, domain 2 (7.9%) DNA-directed RNA polymerase, subunit 2 (7.9%) RNA polymerase, beta subunit, protrusion (7.8%)" LKEMSNYSTSLSSITGGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.2%) "GO:0003746 (25.2%) GO:0005525 (25.2%) GO:0003924 (24.3%)" ribosome disassembly (25.2%) "translation elongation factor activity (25.2%) GTP binding (25.2%) GTPase activity (24.3%)" "IPR000640 (7.8%) IPR005517 (7.8%) IPR014721 (7.8%)" "Elongation factor EFG, domain V-like (7.8%) Translation elongation factor EFG/EF2, domain IV (7.8%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (7.8%)" ELAAFSQFGSDLDEDTKKR Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0045259 (20.1%) GO:0005886 (11.9%)" "GO:0005524 (20.1%) GO:0043531 (20.1%) GO:0046933 (20.1%)" "proton-transporting ATP synthase complex (20.1%) plasma membrane (11.9%)" "ATP binding (20.1%) ADP binding (20.1%) proton-transporting ATP synthase activity, rotational mechanism (20.1%)" "IPR000194 (11.9%) IPR000793 (11.9%) IPR005294 (11.9%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11.9%) ATP synthase, alpha subunit, C-terminal (11.9%) ATP synthase, F1 complex, alpha subunit (11.9%)" DGTFDNLSKR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" KAFANPYNAAQYGYIDDVIEPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.-.-.- (50%) 6.4.1.3 (50%)" "Ligases (50%) propionyl-CoA carboxylase (50%)" GO:0015977 (22.4%) GO:0009317 (22.4%) "GO:0004658 (24.7%) GO:0003989 (22.4%) GO:0016740 (8.2%)" carbon fixation (22.4%) acetyl-CoA carboxylase complex (22.4%) "propionyl-CoA carboxylase activity (24.7%) acetyl-CoA carboxylase activity (22.4%) transferase activity (8.2%)" "IPR011763 (20.2%) IPR029045 (20.2%) IPR034733 (20.2%)" "Acetyl-coenzyme A carboxyltransferase, C-terminal (20.2%) ClpP/crotonase-like domain superfamily (20.2%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.2%)" HYAPTTPVAACYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "2.1.1.133 (81.8%) 2.1.1.- (13.6%) 2.1.1.271 (4.5%)" "precorrin-4 C(11)-methyltransferase (81.8%) Methyltransferases (13.6%) cobalt-precorrin-4 methyltransferase (4.5%)" "GO:0009236 (33.3%) GO:0032259 (33.3%)" GO:0046026 (33.3%) "cobalamin biosynthetic process (33.3%) methylation (33.3%)" precorrin-4 C11-methyltransferase activity (33.3%) "IPR000878 (8.4%) IPR002750 (8.4%) IPR006362 (8.4%)" "Tetrapyrrole methylase (8.4%) CobE/GbiG C-terminal domain (8.4%) Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase (8.4%)" VKDSDGNETSLYHQVWQAGVILLPVQSVGVMGDER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (12.5%) IPR004739 (12.5%) IPR014729 (12.5%)" "GMP synthase, C-terminal (12.5%) GMP synthase, glutamine amidotransferase (12.5%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" ITGTTQRPR Bacillota Bacteria Bacillati Bacillota GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR004389 (33.3%) IPR005484 (33.3%) IPR057268 (33.3%)" "Large ribosomal subunit protein uL18, bacteria (33.3%) Large ribosomal subunit protein uL18, bacterial/plantae/animalia (33.3%) Large ribosomal subunit protein uL18 (33.3%)" IFVDEGPSMKR root "GO:0006412 (24.7%) GO:0002181 (0.1%) GO:0046677 (0.1%)" "GO:0022625 (24.6%) GO:0005840 (0.5%) GO:0015934 (0.1%)" "GO:0003735 (24.8%) GO:0019843 (24.7%) GO:0003729 (0%)" "translation (24.7%) cytoplasmic translation (0.1%) response to antibiotic (0.1%)" "cytosolic large ribosomal subunit (24.6%) ribosome (0.5%) large ribosomal subunit (0.1%)" "structural constituent of ribosome (24.8%) rRNA binding (24.7%) mRNA binding (0%)" "IPR001063 (19.9%) IPR036394 (19.9%) IPR005727 (19.8%)" "Large ribosomal subunit protein uL22 (19.9%) Ribosomal protein uL22 superfamily (19.9%) Large ribosomal subunit protein uL22, bacterial/chloroplast-type (19.8%)" VYYNQGVNKQGEANMINDAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" MCNLSAIEVVDAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (20%) GO:0005829 (20%) "GO:0002161 (20%) GO:0004832 (20%) GO:0005524 (20%)" valyl-tRNA aminoacylation (20%) cytosol (20%) "aminoacyl-tRNA deacylase activity (20%) valine-tRNA ligase activity (20%) ATP binding (20%)" "IPR001412 (9.1%) IPR002300 (9.1%) IPR002303 (9.1%)" "Aminoacyl-tRNA synthetase, class I, conserved site (9.1%) Aminoacyl-tRNA synthetase, class Ia (9.1%) Valine-tRNA ligase (9.1%)" ISFLIDADGKIEHVFDDFK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.11.1.24 (96.7%) 1.11.1.15 (2.5%) 1.11.1.- (0.8%)" "thioredoxin-dependent peroxiredoxin (96.7%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (2.5%) Peroxidases (0.8%)" "GO:0034599 (24.3%) GO:0045454 (24.3%) GO:0006508 (0.2%)" "GO:0005737 (24.3%) GO:0005829 (0.2%)" "GO:0008379 (24.3%) GO:0004601 (1.3%) GO:0004222 (0.2%)" "cellular response to oxidative stress (24.3%) cell redox homeostasis (24.3%) proteolysis (0.2%)" "cytoplasm (24.3%) cytosol (0.2%)" "thioredoxin peroxidase activity (24.3%) peroxidase activity (1.3%) metalloendopeptidase activity (0.2%)" "IPR036249 (21%) IPR000866 (20.5%) IPR050924 (20.5%)" "Thioredoxin-like superfamily (21%) Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (20.5%) Thiol-specific peroxidase BCP/PrxQ (20.5%)" ATAAMMVPFDSIK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0006950 (100%) response to stress (100%) "IPR025543 (20.3%) IPR051096 (20.3%) IPR036275 (20%)" "Dodecin-like (20.3%) BhsA/McbA stress and biofilm-associated protein (20.3%) YdgH-like superfamily (20%)" LMAMHHPFTSPKPEDIHLLDTNPAAVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.1.1.12 (100%) aspartate--tRNA ligase (100%) GO:0006422 (19.8%) GO:0005737 (19.8%) "GO:0003676 (19.8%) GO:0004815 (19.8%) GO:0005524 (19.8%)" aspartyl-tRNA aminoacylation (19.8%) cytoplasm (19.8%) "nucleic acid binding (19.8%) aspartate-tRNA ligase activity (19.8%) ATP binding (19.8%)" "IPR002312 (9.1%) IPR004115 (9.1%) IPR004364 (9.1%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.1%) GAD-like domain superfamily (9.1%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.1%)" MKPTTISLLQK root 2.1.2.11 (100%) 3-methyl-2-oxobutanoate hydroxymethyltransferase (100%) "GO:0015940 (17.8%) GO:0032259 (14.3%)" "GO:0005737 (17.8%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0003864 (17.8%) GO:0000287 (17.8%) GO:0008168 (14.3%)" "pantothenate biosynthetic process (17.8%) methylation (14.3%)" "cytoplasm (17.8%) cytosol (0.1%) membrane (0.1%)" "3-methyl-2-oxobutanoate hydroxymethyltransferase activity (17.8%) magnesium ion binding (17.8%) methyltransferase activity (14.3%)" "IPR003700 (33.5%) IPR015813 (33.3%) IPR040442 (33.3%)" "Ketopantoate hydroxymethyltransferase (33.5%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (33.3%) Pyruvate kinase-like domain superfamily (33.3%)" QTGFAMLAEGSVQEVMDLAGVAHLATIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (76.7%) 1.2.7.- (23.3%)" "pyruvate synthase (76.7%) With an iron-sulfur protein as acceptor (23.3%)" "GO:0006979 (14.6%) GO:0022900 (14.6%) GO:0044281 (12.2%)" "GO:0005506 (14.6%) GO:0051539 (14.6%) GO:0030976 (14.4%)" "response to oxidative stress (14.6%) electron transport chain (14.6%) small molecule metabolic process (12.2%)" "iron ion binding (14.6%) 4 iron, 4 sulfur cluster binding (14.6%) thiamine pyrophosphate binding (14.4%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" GDGMDAWCDWLQTESAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0051604 (20%) "GO:0003924 (20%) GO:0005525 (20%) GO:0008270 (20%)" protein maturation (20%) "GTPase activity (20%) GTP binding (20%) zinc ion binding (20%)" "IPR003495 (26.5%) IPR004392 (26.5%) IPR027417 (26.5%)" "CobW/HypB/UreG, nucleotide-binding domain (26.5%) Hydrogenase maturation factor HypB (26.5%) P-loop containing nucleoside triphosphate hydrolase (26.5%)" ENLVTTNQSTDLEAASQILQYHK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" VASDKMTLIDEPHLVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006508 (33.3%) GO:0005829 (33.3%) GO:0008237 (33.3%) proteolysis (33.3%) cytosol (33.3%) metallopeptidase activity (33.3%) "IPR002510 (16.7%) IPR035068 (16.7%) IPR036059 (16.7%)" "Metalloprotease TldD/E, N-terminal domain (16.7%) Metalloprotease TldD/PmbA, N-terminal (16.7%) Metalloprotease TldD/PmbA superfamily (16.7%)" MVQKGEAVGVIAAQSIGEPGTQLTLR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) GO:0000428 (17%) "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (15.3%)" DNA-templated transcription (17%) DNA-directed RNA polymerase complex (17%) "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (15.3%)" "IPR007081 (9.2%) IPR045867 (9.2%) IPR007083 (9%)" "RNA polymerase Rpb1, domain 5 (9.2%) DNA-directed RNA polymerase, subunit beta-prime (9.2%) RNA polymerase Rpb1, domain 4 (9%)" MLYIEQIKQPDKLLYHASSLIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (50%) GO:0003824 (27.8%) GO:0016874 (16.7%)" "ATP binding (50%) catalytic activity (27.8%) ligase activity (16.7%)" "IPR003781 (20%) IPR013815 (20%) IPR016102 (20%)" "CoA-binding (20%) ATP-grasp fold, subdomain 1 (20%) Succinyl-CoA synthetase-like (20%)" YGAKRPKPGQAAAAAK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20%) GO:0015935 (20%) "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) small ribosomal subunit (20%) "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR005679 (33.3%) IPR006032 (33.3%) IPR012340 (33.3%)" "Ribosomal protein uS12, bacteria (33.3%) Small ribosomal subunit protein uS12 (33.3%) Nucleic acid-binding, OB-fold (33.3%)" HYDLHNTDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.3.18 (100%) phosphoglycolate phosphatase (100%) GO:0006281 (33.3%) GO:0005829 (33.3%) GO:0008967 (33.3%) DNA repair (33.3%) cytosol (33.3%) phosphoglycolate phosphatase activity (33.3%) "IPR006439 (16.5%) IPR023198 (16.5%) IPR023214 (16.5%)" "HAD hydrolase, subfamily IA (16.5%) Phosphoglycolate phosphatase-like, domain 2 (16.5%) HAD superfamily (16.5%)" IAPDYTMKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25.1%) IPR011834 (25.1%) IPR052182 (25.1%)" "Glycosyl transferase, family 35 (25.1%) Alpha-glucan phosphorylase (25.1%) Glycogen_Maltodextrin_Phosphorylase (25.1%)" GNDFLGWLHLPSSITAEHLADLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.2%) GO:0006096 (14.2%) GO:0051156 (14.2%)" GO:0005829 (14.2%) "GO:0004347 (14.2%) GO:0048029 (14.2%) GO:0097367 (14.2%)" "gluconeogenesis (14.2%) glycolytic process (14.2%) glucose 6-phosphate metabolic process (14.2%)" cytosol (14.2%) "glucose-6-phosphate isomerase activity (14.2%) monosaccharide binding (14.2%) carbohydrate derivative binding (14.2%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" EGTRPAVVIPTNEELVIAQDASR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.3%) GO:0019413 (0%)" "GO:0005829 (16.7%) GO:0016020 (0%)" "GO:0008776 (16.7%) GO:0005524 (16.5%) GO:0000287 (16.3%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.3%) acetate biosynthetic process (0%)" "cytosol (16.7%) membrane (0%)" "acetate kinase activity (16.7%) ATP binding (16.5%) magnesium ion binding (16.3%)" "IPR000890 (25.2%) IPR043129 (25.2%) IPR004372 (24.9%)" "Aliphatic acid kinase, short-chain (25.2%) ATPase, nucleotide binding domain (25.2%) Acetate/propionate kinase (24.9%)" HVPGTPYWVITNTNTGR root "GO:0032297 (24.7%) GO:0006355 (24.6%) GO:0005975 (0.1%)" "GO:0005737 (24.5%) GO:0005829 (0.1%) GO:0032991 (0%)" "GO:0043565 (24.5%) GO:0003677 (0.8%) GO:0000287 (0.1%)" "negative regulation of DNA-templated DNA replication initiation (24.7%) regulation of DNA-templated transcription (24.6%) carbohydrate metabolic process (0.1%)" "cytoplasm (24.5%) cytosol (0.1%) protein-containing complex (0%)" "sequence-specific DNA binding (24.5%) DNA binding (0.8%) magnesium ion binding (0.1%)" "IPR026577 (16.9%) IPR036835 (16.9%) IPR005621 (16.5%)" "Replication modulator SeqA, C-terminal DNA-binding domain (16.9%) Replication modulator SeqA, C-terminal DNA-binding domain superfamily (16.9%) Negative modulator of initiation of replication SeqA (16.5%)" GLDEYKDENGNIIYG Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" SFVTLEYQSTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.2.- (100%) Aminoacyltransferases (100%) GO:0006629 (50%) GO:0016746 (50%) lipid metabolic process (50%) acyltransferase activity (50%) "IPR016181 (50%) IPR052351 (50%)" "Acyl-CoA N-acyltransferase (50%) L-ornithine N(alpha)-acyltransferase (50%)" FIAAEPASCPK Bacteroidota Bacteria Pseudomonadati Bacteroidota 4.2.1.20 (100%) tryptophan synthase (100%) "GO:0005737 (24.7%) GO:0016020 (1.6%)" "GO:0004834 (24.7%) GO:0052684 (24.7%) GO:0030170 (24.4%)" "cytoplasm (24.7%) membrane (1.6%)" "tryptophan synthase activity (24.7%) L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity (24.7%) pyridoxal phosphate binding (24.4%)" "IPR001926 (20.2%) IPR023026 (20.2%) IPR036052 (20.2%)" "Tryptophan synthase beta chain-like, PALP domain (20.2%) Tryptophan synthase beta chain/beta chain-like (20.2%) Tryptophan synthase beta chain-like, PALP domain superfamily (20.2%)" LTDSGLATFLADYKK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (16.8%) GO:0006098 (16.8%) GO:0042182 (16.1%)" GO:0005737 (16.8%) "GO:0004801 (16.8%) GO:0016832 (16.8%)" "carbohydrate metabolic process (16.8%) pentose-phosphate shunt (16.8%) ketone catabolic process (16.1%)" cytoplasm (16.8%) "transaldolase activity (16.8%) aldehyde-lyase activity (16.8%)" "IPR013785 (17.2%) IPR001585 (16.6%) IPR004731 (16.6%)" "Aldolase-type TIM barrel (17.2%) Transaldolase/Fructose-6-phosphate aldolase (16.6%) Transaldolase type 3B/Fructose-6-phosphate aldolase (16.6%)" KFCHKVGLNYVSCSPFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0050242 (26.1%) GO:0016301 (25.6%) GO:0046872 (24.3%)" "pyruvate, phosphate dikinase activity (26.1%) kinase activity (25.6%) metal ion binding (24.3%)" "IPR000121 (10.4%) IPR010121 (10.4%) IPR015813 (10.4%)" "PEP-utilising enzyme, C-terminal (10.4%) Pyruvate, phosphate dikinase (10.4%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (10.4%)" GVHILFDKENVQNTLGEYLAANGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (19.9%) GO:0006096 (19.9%)" GO:0005829 (19.9%) "GO:0004619 (19.9%) GO:0030145 (19.9%) GO:0016853 (0.4%)" "glucose catabolic process (19.9%) glycolytic process (19.9%)" cytosol (19.9%) "phosphoglycerate mutase activity (19.9%) manganese ion binding (19.9%) isomerase activity (0.4%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" YGIPAVPHIICK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.5.1.54 (82.6%) 1.5.1.20 (17.4%)" "methylenetetrahydrofolate reductase (NADH) (82.6%) methylenetetrahydrofolate reductase [NAD(P)H] (17.4%)" "GO:0009086 (20%) GO:0035999 (20%)" GO:0005829 (20%) "GO:0071949 (20%) GO:0106312 (10.5%) GO:0004489 (9.5%)" "methionine biosynthetic process (20%) tetrahydrofolate interconversion (20%)" cytosol (20%) "FAD binding (20%) methylenetetrahydrofolate reductase (NADH) activity (10.5%) methylenetetrahydrofolate reductase [NAD(P)H] activity (9.5%)" "IPR003171 (33.3%) IPR004620 (33.3%) IPR029041 (33.3%)" "Methylenetetrahydrofolate reductase-like, catalytic domain (33.3%) 5,10-methylenetetrahydrofolate reductase (33.3%) FAD-linked oxidoreductase-like (33.3%)" VAAAEAPEAAAEEATAENAE Bifidobacterium adolescentis Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium adolescentis GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.3%) IPR036373 (33.3%) IPR047859 (33.3%)" "Large ribosomal subunit protein bL17 (33.3%) Large ribosomal subunit protein bL17 superfamily (33.3%) Large ribosomal subunit protein bL17, conserved site (33.3%)" IAGESTNSYDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "4.2.1.136 (50%) 5.1.99.6 (50%)" "ADP-dependent NAD(P)H-hydrate dehydratase (50%) NAD(P)H-hydrate epimerase (50%)" "GO:0046496 (16.3%) GO:0110051 (16.3%)" "GO:0005524 (16.3%) GO:0046872 (16.3%) GO:0052855 (16.3%)" "nicotinamide nucleotide metabolic process (16.3%) metabolite repair (16.3%)" "ATP binding (16.3%) metal ion binding (16.3%) ADP-dependent NAD(P)H-hydrate dehydratase activity (16.3%)" "IPR000631 (16.7%) IPR004443 (16.7%) IPR017953 (16.7%)" "ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase (16.7%) YjeF N-terminal domain (16.7%) Carbohydrate kinase, predicted, conserved site (16.7%)" GPGSGLGGTSTR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (25.1%) "GO:0022625 (25.1%) GO:0005840 (0.1%)" "GO:0003735 (25.1%) GO:0019843 (24.7%)" translation (25.1%) "cytosolic large ribosomal subunit (25.1%) ribosome (0.1%)" "structural constituent of ribosome (25.1%) rRNA binding (24.7%)" "IPR005749 (20.1%) IPR036227 (20.1%) IPR021131 (20%)" "Large ribosomal subunit protein uL15, bacteria (20.1%) Large ribosomal subunit protein uL15/eL18 superfamily (20.1%) Large ribosomal subunit protein uL15/eL18 (20%)" FNSDINLEYK Bacilli Bacteria Bacillati Bacillota Bacilli 2.7.11.- (100%) Protein-serine/threonine kinases (100%) GO:0009401 (47.4%) GO:0005737 (47.4%) GO:0016740 (5.3%) phosphoenolpyruvate-dependent sugar phosphotransferase system (47.4%) cytoplasm (47.4%) transferase activity (5.3%) "IPR000032 (20.1%) IPR002114 (20.1%) IPR035895 (20.1%)" "Phosphocarrier protein HPr-like (20.1%) Phosphotransferase system, HPr serine phosphorylation site (20.1%) HPr-like superfamily (20.1%)" MAPPQISAEVLKK root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0042026 (0.1%) GO:0051085 (0.1%) GO:0006260 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0005524 (27.6%) GO:0140662 (27.6%) GO:0051082 (26.6%)" "protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%) DNA replication (0.1%)" "cytosol (0.1%) cytoplasm (0%) plasma membrane (0%)" "ATP binding (27.6%) ATP-dependent protein folding chaperone (27.6%) unfolded protein binding (26.6%)" "IPR013126 (17%) IPR043129 (16.9%) IPR018181 (16.9%)" "Heat shock protein 70 family (17%) ATPase, nucleotide binding domain (16.9%) Heat shock protein 70, conserved site (16.9%)" LKEYNAAPPLQGFGISAPDQVK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.2.1.20 (100%) tryptophan synthase (100%) "GO:0000162 (0.2%) GO:0009073 (0.2%)" "GO:0005829 (49.2%) GO:0005737 (0.2%)" "GO:0004834 (49.2%) GO:0016829 (0.7%) GO:0060090 (0.2%)" "L-tryptophan biosynthetic process (0.2%) aromatic amino acid family biosynthetic process (0.2%)" "cytosol (49.2%) cytoplasm (0.2%)" "tryptophan synthase activity (49.2%) lyase activity (0.7%) molecular adaptor activity (0.2%)" "IPR002028 (25.1%) IPR011060 (25.1%) IPR013785 (25.1%)" "Tryptophan synthase, alpha chain (25.1%) Ribulose-phosphate binding barrel (25.1%) Aldolase-type TIM barrel (25.1%)" VLLPNDDVNKSQSSNDTFPSAMHIAAYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.2 (100%) fumarate hydratase (100%) "GO:0006099 (20%) GO:0006106 (20%) GO:0006108 (20%)" GO:0005737 (20%) GO:0004333 (20%) "tricarboxylic acid cycle (20%) fumarate metabolic process (20%) malate metabolic process (20%)" cytoplasm (20%) fumarate hydratase activity (20%) "IPR000362 (14.3%) IPR005677 (14.3%) IPR008948 (14.3%)" "Fumarate lyase family (14.3%) Fumarate hydratase, class II (14.3%) L-Aspartase-like (14.3%)" IDAIISSLSITDKR root 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (48.4%) GO:0006995 (0.1%) GO:0009267 (0.1%)" "GO:0030288 (50.3%) GO:0030313 (0.2%) GO:0016020 (0.1%)" "GO:0016597 (0.2%) GO:0005524 (0.1%) GO:0016787 (0.1%)" "amino acid transport (48.4%) cellular response to nitrogen starvation (0.1%) cellular response to starvation (0.1%)" "outer membrane-bounded periplasmic space (50.3%) cell envelope (0.2%) membrane (0.1%)" "amino acid binding (0.2%) ATP binding (0.1%) hydrolase activity (0.1%)" "IPR001638 (33.7%) IPR018313 (33.4%) IPR005768 (32.9%)" "Solute-binding protein family 3/N-terminal domain of MltF (33.7%) Solute-binding protein family 3, conserved site (33.4%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (32.9%)" EVFGDKSPAISATK root 2.3.1.41 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase I (100%) "GO:0006633 (33.1%) GO:1903966 (0.2%)" GO:0005829 (33.1%) "GO:0004315 (33.1%) GO:0016746 (0.6%)" "fatty acid biosynthetic process (33.1%) monounsaturated fatty acid biosynthetic process (0.2%)" cytosol (33.1%) "3-oxoacyl-[acyl-carrier-protein] synthase activity (33.1%) acyltransferase activity (0.6%)" "IPR000794 (16.9%) IPR014031 (16.9%) IPR016039 (16.9%)" "Beta-ketoacyl synthase (16.9%) Beta-ketoacyl synthase, C-terminal (16.9%) Thiolase-like (16.9%)" HKAEEVSSEVAGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR024623 (100%) Uncharacterised protein family YtxH (100%) YLDNMSEEEILELNIPTGVPLVYEFDENFKPLKR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "5.4.2.11 (98.1%) 5.4.2.- (1.9%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (98.1%) Phosphotransferases (phosphomutases) (1.9%)" "GO:0006096 (32.5%) GO:0006094 (31.5%) GO:0061621 (0.3%)" "GO:0005737 (0.3%) GO:0005829 (0.3%)" "GO:0004619 (30.5%) GO:0016868 (2.3%) GO:0016853 (1.3%)" "glycolytic process (32.5%) gluconeogenesis (31.5%) canonical glycolysis (0.3%)" "cytoplasm (0.3%) cytosol (0.3%)" "phosphoglycerate mutase activity (30.5%) intramolecular phosphotransferase activity (2.3%) isomerase activity (1.3%)" "IPR005952 (25.9%) IPR029033 (25.9%) IPR013078 (24.9%)" "Phosphoglycerate mutase 1 (25.9%) Histidine phosphatase superfamily (25.9%) Histidine phosphatase superfamily, clade-1 (24.9%)" YIGSDENWEKAEQAIIEACEEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.6%) GO:0005737 (16.6%) "GO:0004829 (16.6%) GO:0005524 (16.6%) GO:0046872 (16.6%)" threonyl-tRNA aminoacylation (16.6%) cytoplasm (16.6%) "threonine-tRNA ligase activity (16.6%) ATP binding (16.6%) metal ion binding (16.6%)" "IPR002314 (7.8%) IPR002320 (7.8%) IPR004154 (7.8%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.8%) Threonine-tRNA ligase, class IIa (7.8%) Anticodon-binding (7.8%)" RSDREASEGCVLAKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" AVTDKLEADGVASFIK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (25%)" GO:0005737 (25%) GO:0004801 (25%) "carbohydrate metabolic process (25%) pentose-phosphate shunt (25%)" cytoplasm (25%) transaldolase activity (25%) "IPR001585 (25%) IPR004732 (25%) IPR013785 (25%)" "Transaldolase/Fructose-6-phosphate aldolase (25%) Transaldolase type 2 (25%) Aldolase-type TIM barrel (25%)" GVSVLELINTFEK root 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) "GO:0006012 (31.7%) GO:0033499 (1.7%)" GO:0005829 (33.3%) GO:0003978 (33.3%) "galactose metabolic process (31.7%) galactose catabolic process via UDP-galactose, Leloir pathway (1.7%)" cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR005886 (33.3%) IPR036291 (33.3%) IPR001509 (25%)" "UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD-dependent epimerase/dehydratase (25%)" IYPSGSLISQTGGHGDFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016810 (100%) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (100%) "IPR006680 (25%) IPR011059 (25%) IPR032466 (25%)" "Amidohydrolase-related (25%) Metal-dependent hydrolase, composite domain superfamily (25%) Metal-dependent hydrolase (25%)" GMHDIYEPADPPLRR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" ALPSTITFPFNSSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006811 (25%) "GO:0009279 (25%) GO:0046930 (25%)" GO:0015288 (25%) monoatomic ion transport (25%) "cell outer membrane (25%) pore complex (25%)" porin activity (25%) "IPR006664 (19.4%) IPR006665 (19.4%) IPR011250 (19.4%)" "Outer membrane protein, bacterial (19.4%) OmpA-like domain (19.4%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (19.4%)" YVTDGTSAEGQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0009263 (20%) GO:0071897 (20%)" "GO:0004748 (20%) GO:0005524 (20%) GO:0031419 (20%)" "deoxyribonucleotide biosynthetic process (20%) DNA biosynthetic process (20%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20%) ATP binding (20%) cobalamin binding (20%)" "IPR000788 (25%) IPR013344 (25%) IPR013509 (25%)" "Ribonucleotide reductase large subunit, C-terminal (25%) Ribonucleotide reductase, adenosylcobalamin-dependent (25%) Ribonucleotide reductase large subunit, N-terminal (25%)" ECTLETLEEMLEKLEVVVNER root "GO:0006355 (0.1%) GO:0045892 (0%) GO:0006417 (0%)" "GO:0009295 (11%) GO:0005829 (11%) GO:0032993 (11%)" "GO:0046983 (11.1%) GO:0000976 (11%) GO:0001217 (11%)" "regulation of DNA-templated transcription (0.1%) negative regulation of DNA-templated transcription (0%) regulation of translation (0%)" "nucleoid (11%) cytosol (11%) protein-DNA complex (11%)" "protein dimerization activity (11.1%) transcription cis-regulatory region binding (11%) DNA-binding transcription repressor activity (11%)" "IPR027454 (20.2%) IPR054180 (20.2%) IPR001801 (20%)" "Histone-like protein H-NS, N-terminal (20.2%) DNA-binding protein H-NS-like, N-terminal domain (20.2%) DNA-binding protein H-NS-like (20%)" TKPGGFEGIGAEGLAWLKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.5 (100%) chorismate mutase (100%) GO:0046417 (45%) "GO:0004106 (45%) GO:0003849 (5%) GO:0016740 (5%)" chorismate metabolic process (45%) "chorismate mutase activity (45%) 3-deoxy-7-phosphoheptulonate synthase activity (5%) transferase activity (5%)" "IPR002701 (16.7%) IPR006218 (16.7%) IPR013785 (16.7%)" "Chorismate mutase II, prokaryotic-type (16.7%) DAHP synthetase I/KDSA (16.7%) Aldolase-type TIM barrel (16.7%)" ELKLDYELKPMDFSGIIPALQTK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006865 (24.9%) GO:0006868 (0.2%) GO:1903803 (0.2%)" "GO:0030288 (25.2%) GO:0016020 (24.3%) GO:0030313 (0.2%)" "GO:0015276 (24.3%) GO:0016597 (0.2%) GO:0016787 (0.2%)" "amino acid transport (24.9%) glutamine transport (0.2%) L-glutamine import across plasma membrane (0.2%)" "outer membrane-bounded periplasmic space (25.2%) membrane (24.3%) cell envelope (0.2%)" "ligand-gated monoatomic ion channel activity (24.3%) amino acid binding (0.2%) hydrolase activity (0.2%)" "IPR001638 (25.6%) IPR018313 (25.4%) IPR001320 (24.5%)" "Solute-binding protein family 3/N-terminal domain of MltF (25.6%) Solute-binding protein family 3, conserved site (25.4%) Ionotropic glutamate receptor, C-terminal (24.5%)" AFQAMPALYIADGHHR FGTVPHSGFGLGFER root 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.4%) "GO:0005737 (18.5%) GO:0005739 (0.9%)" "GO:0005524 (20.4%) GO:0004816 (20.1%) GO:0003676 (19.2%)" asparaginyl-tRNA aminoacylation (20.4%) "cytoplasm (18.5%) mitochondrion (0.9%)" "ATP binding (20.4%) asparagine-tRNA ligase activity (20.1%) nucleic acid binding (19.2%)" "IPR004364 (14.7%) IPR004522 (14.5%) IPR006195 (14.5%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (14.7%) Asparagine-tRNA ligase (14.5%) Aminoacyl-tRNA synthetase, class II (14.5%)" EDHPQVMNAAVR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (30.4%) GO:1902600 (30.4%) GO:0006811 (1.4%)" "GO:0005524 (31.3%) GO:0016787 (6.5%)" "ATP metabolic process (30.4%) proton transmembrane transport (30.4%) monoatomic ion transport (1.4%)" "ATP binding (31.3%) hydrolase activity (6.5%)" "IPR022879 (20.3%) IPR055190 (20.3%) IPR000194 (20%)" "V-type ATP synthase regulatory subunit B/beta (20.3%) ATP synthase A/B type, C-terminal domain (20.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20%)" IKDSLPDGSTQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003677 (100%) DNA binding (100%) ANFDKYEGQDIVSNASCTTNCLAPLAK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "1.2.1.- (92%) 1.2.1.12 (8%)" "With NAD(+) or NADP(+) as acceptor (92%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (8%)" "GO:0072524 (19.6%) GO:0006006 (19.1%) GO:0006096 (0.4%)" GO:0005737 (0.4%) "GO:0051287 (20.6%) GO:0050661 (19.1%) GO:0004365 (17.6%)" "pyridine-containing compound metabolic process (19.6%) glucose metabolic process (19.1%) glycolytic process (0.4%)" cytoplasm (0.4%) "NAD binding (20.6%) NADP binding (19.1%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (17.6%)" "IPR020830 (17%) IPR020831 (17%) IPR020829 (16.9%)" "Glyceraldehyde 3-phosphate dehydrogenase, active site (17%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.9%)" LFIDNFDKYTDTPAGAALVAAGPKL Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.3%) GO:0005829 (18.3%) "GO:0004612 (18.3%) GO:0005524 (18.3%) GO:0046872 (15.9%)" gluconeogenesis (18.3%) cytosol (18.3%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.3%) ATP binding (18.3%) metal ion binding (15.9%)" "IPR001272 (26.4%) IPR013035 (26.4%) IPR008210 (23.6%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (26.4%) Phosphoenolpyruvate carboxykinase, C-terminal (26.4%) Phosphoenolpyruvate carboxykinase, N-terminal (23.6%)" FYAEEEGKPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.6%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (32.9%) IPR015824 (32.9%) IPR036043 (32.9%)" "Phosphoglycerate kinase (32.9%) Phosphoglycerate kinase, N-terminal (32.9%) Phosphoglycerate kinase superfamily (32.9%)" SGPYLISPQKDYECMGDVPNVCFPCAALHDSETGR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.4.1.- (100%) Hexosyltransferases (100%) "GO:0016757 (78.9%) GO:0016787 (10.5%) GO:0016798 (10.5%)" "glycosyltransferase activity (78.9%) hydrolase activity (10.5%) hydrolase activity, acting on glycosyl bonds (10.5%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" AAANYLDIPLYR Bacteria Bacteria 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.2%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.2%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020810 (16.8%) IPR020811 (16.6%)" "Enolase (16.8%) Enolase, C-terminal TIM barrel domain (16.8%) Enolase, N-terminal (16.6%)" SGVTNSDGNDVADTSPTFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0008270 (100%) zinc ion binding (100%) "IPR000962 (51.4%) IPR037187 (48.6%)" "Zinc finger, DksA/TraR C4-type (51.4%) DksA, N-terminal domain superfamily (48.6%)" GVIMDGDKTEHLLEAIPVIGCYCDVIGVR Candidatus Caccoplasma intestinavium Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Candidatus Caccoplasma Candidatus Caccoplasma intestinavium 2.1.3.11 (100%) N-succinylornithine carbamoyltransferase (100%) "GO:0019240 (25%) GO:0042450 (25%)" "GO:0004585 (25%) GO:0016597 (25%)" "citrulline biosynthetic process (25%) L-arginine biosynthetic process via ornithine (25%)" "ornithine carbamoyltransferase activity (25%) amino acid binding (25%)" "IPR006130 (20%) IPR006131 (20%) IPR006132 (20%)" "Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20%)" LAMYNYTDLKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0051301 (84.5%) GO:0006396 (6.9%) GO:0016192 (1.7%)" "GO:0005737 (1.7%) GO:0009579 (1.7%) GO:0012505 (1.7%)" "cell division (84.5%) RNA processing (6.9%) vesicle-mediated transport (1.7%)" "cytoplasm (1.7%) thylakoid (1.7%) endomembrane system (1.7%)" "IPR011990 (42.1%) IPR019734 (42.1%) IPR051685 (8.9%)" "Tetratricopeptide-like helical domain superfamily (42.1%) Tetratricopeptide repeat (42.1%) Ycf3/AcsC/BcsC/TPR Multifunctional (8.9%)" LLDGIRVDSYGSMVPISNVAAVTTPDAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006415 (31.7%) GO:0006412 (1.9%)" GO:0005737 (32.9%) GO:0043023 (33.5%) "translational termination (31.7%) translation (1.9%)" cytoplasm (32.9%) ribosomal large subunit binding (33.5%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" ALLNSMVIGVTEGFTK root "GO:0002181 (24.8%) GO:0000027 (0%) GO:0006412 (0%)" "GO:0022625 (24.8%) GO:0005840 (0.5%) GO:0005737 (0%)" "GO:0003735 (24.8%) GO:0019843 (24.8%) GO:0070180 (0%)" "cytoplasmic translation (24.8%) ribosomal large subunit assembly (0%) translation (0%)" "cytosolic large ribosomal subunit (24.8%) ribosome (0.5%) cytoplasm (0%)" "structural constituent of ribosome (24.8%) rRNA binding (24.8%) large ribosomal subunit rRNA binding (0%)" "IPR000702 (20%) IPR020040 (20%) IPR036789 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, alpha-beta domain (20%) Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily (20%)" HIGVNKADAEVMLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" VESLCEHNPMLGHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0016301 (25.1%) GO:0050242 (25.1%) GO:0005524 (24.9%)" "kinase activity (25.1%) pyruvate, phosphate dikinase activity (25.1%) ATP binding (24.9%)" "IPR000121 (10.1%) IPR010121 (10.1%) IPR015813 (10.1%)" "PEP-utilising enzyme, C-terminal (10.1%) Pyruvate, phosphate dikinase (10.1%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (10.1%)" YGIVDVKEIVHNPSYDVLFAEETKPSLEGFEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.5%) GO:0005829 (18.5%) "GO:0004612 (18.5%) GO:0005524 (18.5%) GO:0046872 (18.5%)" gluconeogenesis (18.5%) cytosol (18.5%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.5%) ATP binding (18.5%) metal ion binding (18.5%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" ILALLDKNSFHEYDMFVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0015977 (23.1%) GO:0009317 (23.1%) "GO:0003989 (23.1%) GO:0004658 (23.1%) GO:0016740 (3.8%)" carbon fixation (23.1%) acetyl-CoA carboxylase complex (23.1%) "acetyl-CoA carboxylase activity (23.1%) propionyl-CoA carboxylase activity (23.1%) transferase activity (3.8%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" GIHLSPTEVFVNDGAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.6.1.83 (100%) LL-diaminopimelate aminotransferase (100%) GO:0033362 (32.1%) "GO:0010285 (33.9%) GO:0030170 (33.9%)" lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway (32.1%) "L,L-diaminopimelate aminotransferase activity (33.9%) pyridoxal phosphate binding (33.9%)" "IPR004839 (20%) IPR015421 (20%) IPR015422 (20%)" "Aminotransferase, class I/classII, large domain (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" RAGAPFGPGANPMHGR Bacteria Bacteria 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (30.9%) GO:0005975 (0%) GO:0044814 (0%)" "GO:0005829 (32%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0008861 (32.1%) GO:0016829 (4.4%) GO:0016746 (0.4%)" "glucose metabolic process (30.9%) carbohydrate metabolic process (0%) pyruvate fermentation via PFL (0%)" "cytosol (32%) cytoplasm (0.1%) membrane (0%)" "formate C-acetyltransferase activity (32.1%) lyase activity (4.4%) acyltransferase activity (0.4%)" "IPR004184 (20.2%) IPR050244 (20.2%) IPR001150 (20.2%)" "Pyruvate formate lyase domain (20.2%) Autonomous Glycyl Radical Cofactor (20.2%) Glycine radical domain (20.2%)" AKSQLEEAGATVELK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0006412 (24.8%) "GO:0022625 (24.8%) GO:0005840 (0.7%)" "GO:0003729 (24.8%) GO:0003735 (24.8%)" translation (24.8%) "cytosolic large ribosomal subunit (24.8%) ribosome (0.7%)" "mRNA binding (24.8%) structural constituent of ribosome (24.8%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" AGDTVTVAYR Bacteria Bacteria GO:0006412 (32.8%) "GO:0022625 (32.5%) GO:0005840 (0.6%) GO:0016020 (0.3%)" GO:0003735 (33.1%) translation (32.8%) "cytosolic large ribosomal subunit (32.5%) ribosome (0.6%) membrane (0.3%)" structural constituent of ribosome (33.1%) "IPR001857 (24.8%) IPR008991 (24.8%) IPR018257 (24.5%)" "Large ribosomal subunit protein bL19 (24.8%) Translation protein SH3-like domain superfamily (24.8%) Large ribosomal subunit protein bL19, conserved site (24.5%)" SAVAEKYGKEIADNTSILYGGSCKPSNAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" STYLVNTPNFVACHVQAYLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (80%) 1.2.7.- (13.3%) 1.2.1.51 (6.7%)" "pyruvate synthase (80%) With an iron-sulfur protein as acceptor (13.3%) pyruvate dehydrogenase (NADP(+)) (6.7%)" "GO:0006979 (14.8%) GO:0022900 (14.8%) GO:0044281 (11.9%)" "GO:0005506 (14.8%) GO:0051539 (14.8%) GO:0030976 (14%)" "response to oxidative stress (14.8%) electron transport chain (14.8%) small molecule metabolic process (11.9%)" "iron ion binding (14.8%) 4 iron, 4 sulfur cluster binding (14.8%) thiamine pyrophosphate binding (14%)" "IPR002869 (7.8%) IPR009014 (7.8%) IPR011895 (7.8%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.8%) Pyruvate-flavodoxin oxidoreductase (7.8%)" GALCLETQHYPDSPNQPAFPSVVLRPGEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (16.7%) IPR011013 (16.7%) IPR014718 (16.7%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (16.7%) Galactose mutarotase-like domain superfamily (16.7%) Glycoside hydrolase-type carbohydrate-binding (16.7%)" CSCFEDKYGMLLVDGPLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" VLAEQNADVR root "3.4.16.4 (99.2%) 3.5.2.6 (0.8%)" "serine-type D-Ala-D-Ala carboxypeptidase (99.2%) beta-lactamase (0.8%)" "GO:0006508 (12.1%) GO:0008360 (11.5%) GO:0071555 (11.5%)" "GO:0005886 (10.6%) GO:0030288 (9.8%)" "GO:0009002 (12.1%) GO:0008658 (10.3%) GO:0042803 (9.8%)" "proteolysis (12.1%) regulation of cell shape (11.5%) cell wall organization (11.5%)" "plasma membrane (10.6%) outer membrane-bounded periplasmic space (9.8%)" "serine-type D-Ala-D-Ala carboxypeptidase activity (12.1%) penicillin binding (10.3%) protein homodimerization activity (9.8%)" "IPR001967 (18.2%) IPR012338 (18.2%) IPR018044 (17.3%)" "Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal (18.2%) Beta-lactamase/transpeptidase-like (18.2%) Peptidase S11, D-alanyl-D-alanine carboxypeptidase A (17.3%)" VTGNNHFDAYPSQNDWYETVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.135 (100%) neopullulanase (100%) GO:0009313 (47.6%) "GO:0004556 (47.6%) GO:0031216 (4.8%)" oligosaccharide catabolic process (47.6%) "alpha-amylase activity (47.6%) neopullulanase activity (4.8%)" "IPR006047 (33.3%) IPR013780 (33.3%) IPR017853 (33.3%)" "Glycosyl hydrolase family 13, catalytic domain (33.3%) Glycosyl hydrolase, all-beta (33.3%) Glycoside hydrolase superfamily (33.3%)" IVEAIEEPVIVVVSALGGITDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.3 (51.4%) 2.7.2.4 (48.6%)" "homoserine dehydrogenase (51.4%) aspartate kinase (48.6%)" "GO:0009086 (11.2%) GO:0009088 (11.2%) GO:0009089 (11.2%)" "GO:0004072 (11.2%) GO:0004412 (11.2%) GO:0005524 (11.2%)" "methionine biosynthetic process (11.2%) threonine biosynthetic process (11.2%) lysine biosynthetic process via diaminopimelate (11.2%)" "aspartate kinase activity (11.2%) homoserine dehydrogenase activity (11.2%) ATP binding (11.2%)" "IPR001048 (7.4%) IPR001341 (7.4%) IPR001342 (7.4%)" "Aspartate/glutamate/uridylate kinase (7.4%) Aspartate kinase (7.4%) Homoserine dehydrogenase, catalytic (7.4%)" DEVIAMGVLPAISEWHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (38.9%) "GO:0016615 (22.2%) GO:0016616 (22.2%) GO:0030060 (16.7%)" malate metabolic process (38.9%) "malate dehydrogenase activity (22.2%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (22.2%) L-malate dehydrogenase (NAD+) activity (16.7%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" EEQHTPVSDISALTVGQALK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0010608 (24.6%) GO:0006974 (0.2%) GO:0007231 (0.2%)" GO:0005829 (24.6%) "GO:0033592 (24.6%) GO:0034057 (24.6%) GO:0003729 (0.2%)" "post-transcriptional regulation of gene expression (24.6%) DNA damage response (0.2%) osmosensory signaling pathway (0.2%)" cytosol (24.6%) "RNA strand annealing activity (24.6%) RNA strand-exchange activity (24.6%) mRNA binding (0.2%)" "IPR023529 (25.2%) IPR035236 (25.2%) IPR016103 (24.8%)" "RNA chaperone ProQ (25.2%) RNA chaperone ProQ, C-terminal (25.2%) ProQ/FinO domain (24.8%)" ALQPGEVLLLENLR Bacteria Bacteria 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33%) IPR015824 (33%) IPR036043 (33%)" "Phosphoglycerate kinase (33%) Phosphoglycerate kinase, N-terminal (33%) Phosphoglycerate kinase superfamily (33%)" AIFIETLGNPNSNIIDMDAVAAIAHK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.5.1.49 (75%) 4.2.99.10 (25%)" "O-acetylhomoserine aminocarboxypropyltransferase (75%) Transferred entry: 2.5.1.49 (25%)" "GO:0006535 (13.9%) GO:0019346 (13.9%) GO:0071269 (13.9%)" GO:0005737 (13.9%) "GO:0003961 (13.9%) GO:0004124 (13.9%) GO:0030170 (13.9%)" "cysteine biosynthetic process from serine (13.9%) transsulfuration (13.9%) L-homocysteine biosynthetic process (13.9%)" cytoplasm (13.9%) "O-acetylhomoserine aminocarboxypropyltransferase activity (13.9%) cysteine synthase activity (13.9%) pyridoxal phosphate binding (13.9%)" "IPR000277 (16.7%) IPR006235 (16.7%) IPR015421 (16.7%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (16.7%) O-acetylhomoserine/O-acetylserine sulfhydrylase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" MCNLSSISKVEEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (19.3%) GO:0005829 (19.3%) "GO:0002161 (20.5%) GO:0004832 (20.5%) GO:0005524 (20.5%)" valyl-tRNA aminoacylation (19.3%) cytosol (19.3%) "aminoacyl-tRNA deacylase activity (20.5%) valine-tRNA ligase activity (20.5%) ATP binding (20.5%)" "IPR001412 (9.1%) IPR002300 (9.1%) IPR002303 (9.1%)" "Aminoacyl-tRNA synthetase, class I, conserved site (9.1%) Aminoacyl-tRNA synthetase, class Ia (9.1%) Valine-tRNA ligase (9.1%)" SVFPIQSYSGNSELQYVSYR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.8%) GO:0006352 (0%) GO:0006412 (0%)" "GO:0000428 (20.1%) GO:0005829 (0%) GO:0000345 (0%)" "GO:0003677 (19.8%) GO:0003899 (19.8%) GO:0032549 (19.6%)" "DNA-templated transcription (19.8%) DNA-templated transcription initiation (0%) translation (0%)" "DNA-directed RNA polymerase complex (20.1%) cytosol (0%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA binding (19.8%) DNA-directed RNA polymerase activity (19.8%) ribonucleoside binding (19.6%)" "IPR007644 (8.1%) IPR015712 (8%) IPR007642 (7.9%)" "RNA polymerase, beta subunit, protrusion (8.1%) DNA-directed RNA polymerase, subunit 2 (8%) RNA polymerase Rpb2, domain 2 (7.9%)" YFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRR root "5.1.3.2 (99.6%) 5.1.3.7 (0.4%)" "UDP-glucose 4-epimerase (99.6%) UDP-N-acetylglucosamine 4-epimerase (0.4%)" "GO:0006012 (33%) GO:0005996 (0.2%) GO:0005975 (0%)" "GO:0005829 (33%) GO:0005737 (0%)" "GO:0003978 (33%) GO:0016853 (0.4%) GO:0016829 (0%)" "galactose metabolic process (33%) monosaccharide metabolic process (0.2%) carbohydrate metabolic process (0%)" "cytosol (33%) cytoplasm (0%)" "UDP-glucose 4-epimerase activity (33%) isomerase activity (0.4%) lyase activity (0%)" "IPR036291 (33.4%) IPR005886 (33.2%) IPR001509 (26.8%)" "NAD(P)-binding domain superfamily (33.4%) UDP-glucose 4-epimerase (33.2%) NAD-dependent epimerase/dehydratase (26.8%)" AGNKGAEAALTALEMINVLK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "2.5.1.78 (99.7%) 2.5.1.9 (0.3%)" "6,7-dimethyl-8-ribityllumazine synthase (99.7%) riboflavin synthase (0.3%)" GO:0009231 (24.7%) "GO:0009349 (24.7%) GO:0005829 (24.7%) GO:0005737 (0.1%)" "GO:0000906 (24.7%) GO:0016874 (0.8%) GO:0016740 (0.2%)" riboflavin biosynthetic process (24.7%) "riboflavin synthase complex (24.7%) cytosol (24.7%) cytoplasm (0.1%)" "6,7-dimethyl-8-ribityllumazine synthase activity (24.7%) ligase activity (0.8%) transferase activity (0.2%)" "IPR002180 (33.4%) IPR034964 (33.3%) IPR036467 (33.3%)" "Lumazine/riboflavin synthase (33.4%) Lumazine synthase (33.3%) Lumazine/riboflavin synthase superfamily (33.3%)" AVADGWVPGETLFGIEEACEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.86 (91.5%) 1.1.1.- (8.5%)" "ketol-acid reductoisomerase (NADP(+)) (91.5%) With NAD(+) or NADP(+) as acceptor (8.5%)" "GO:0009097 (20.6%) GO:0009099 (20.6%)" GO:0070013 (0.8%) "GO:0004455 (20.6%) GO:0046872 (20.6%) GO:0016853 (17%)" "isoleucine biosynthetic process (20.6%) L-valine biosynthetic process (20.6%)" intracellular organelle lumen (0.8%) "ketol-acid reductoisomerase activity (20.6%) metal ion binding (20.6%) isomerase activity (17%)" "IPR000506 (16.7%) IPR008927 (16.7%) IPR013023 (16.7%)" "Ketol-acid reductoisomerase, C-terminal (16.7%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.7%) Ketol-acid reductoisomerase (16.7%)" QIAILYCGIHGLLR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0005886 (17.5%) GO:0045259 (17.5%)" "GO:0005524 (17.5%) GO:0043531 (17.5%) GO:0046933 (17.5%)" "plasma membrane (17.5%) proton-transporting ATP synthase complex (17.5%)" "ATP binding (17.5%) ADP binding (17.5%) proton-transporting ATP synthase activity, rotational mechanism (17.5%)" "IPR000194 (10%) IPR000793 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) ATP synthase, alpha subunit, C-terminal (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" INILDTPGHQDFAEDTYR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006449 (16.1%) GO:0006415 (0.1%)" "GO:0005829 (16.9%) GO:0016020 (0.1%)" "GO:0003924 (16.9%) GO:0005525 (16.9%) GO:0016150 (16.9%)" "regulation of translational termination (16.1%) translational termination (0.1%)" "cytosol (16.9%) membrane (0.1%)" "GTPase activity (16.9%) GTP binding (16.9%) translation release factor activity, codon nonspecific (16.9%)" "IPR000795 (9.2%) IPR004548 (9.2%) IPR005225 (9.2%)" "Translational (tr)-type GTP-binding domain (9.2%) Peptide chain release factor 3 (9.2%) Small GTP-binding domain (9.2%)" IEYVSSEHLTPDNVDEQLGHVDGVVICPGFGSR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (12.5%) GO:0044210 (12.5%)" "GO:0005829 (12.5%) GO:0097268 (12.5%)" "GO:0003883 (12.5%) GO:0005524 (12.5%) GO:0042802 (12.5%)" "pyrimidine nucleobase biosynthetic process (12.5%) 'de novo' CTP biosynthetic process (12.5%)" "cytosol (12.5%) cytoophidium (12.5%)" "CTP synthase activity (12.5%) ATP binding (12.5%) identical protein binding (12.5%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" HDGTIYLMDEIHTPDSSR NAYISIFTCPSVAK Pseudomonadati Bacteria Pseudomonadati "2.8.3.- (92.5%) 3.1.2.1 (7.5%)" "CoA-transferases (92.5%) acetyl-CoA hydrolase (7.5%)" "GO:0006083 (25%) GO:0006084 (24.7%)" "GO:0003986 (25%) GO:0008775 (25%) GO:0016740 (0.1%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (24.7%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%) transferase activity (0.1%)" "IPR026888 (16.7%) IPR037171 (16.7%) IPR038460 (16.7%)" "Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%) NagB/RpiA transferase-like (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily (16.7%)" NNLLLSMTSQILDLVYTEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.24.55 (100%) pitrilysin (100%) GO:0006508 (33.3%) "GO:0004222 (33.3%) GO:0046872 (33.3%)" proteolysis (33.3%) "metalloendopeptidase activity (33.3%) metal ion binding (33.3%)" "IPR001431 (20%) IPR007863 (20%) IPR011249 (20%)" "Peptidase M16, zinc-binding site (20%) Peptidase M16, C-terminal (20%) Metalloenzyme, LuxS/M16 peptidase-like (20%)" AGVSNLLDILSAVTGQSIPELEKQFEGK root "6.1.1.2 (99.8%) 3.1.3.18 (0.2%)" "tryptophan--tRNA ligase (99.8%) phosphoglycolate phosphatase (0.2%)" "GO:0006436 (24.9%) GO:0005975 (0.1%) GO:0046295 (0.1%)" "GO:0005829 (24.9%) GO:0005739 (0.1%)" "GO:0004830 (24.9%) GO:0005524 (24.8%) GO:0016874 (0.2%)" "tryptophanyl-tRNA aminoacylation (24.9%) carbohydrate metabolic process (0.1%) glycolate biosynthetic process (0.1%)" "cytosol (24.9%) mitochondrion (0.1%)" "tryptophan-tRNA ligase activity (24.9%) ATP binding (24.8%) ligase activity (0.2%)" "IPR050203 (16.9%) IPR014729 (16.9%) IPR002305 (16.8%)" "Tryptophan--tRNA ligase (16.9%) Rossmann-like alpha/beta/alpha sandwich fold (16.9%) Aminoacyl-tRNA synthetase, class Ic (16.8%)" LQTVLFQQQLGTLR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (16.8%) GO:0006420 (16.3%)" "GO:0005829 (16.8%) GO:0009345 (0%)" "GO:0004820 (16.8%) GO:0005524 (16.8%) GO:0004814 (16.3%)" "glycyl-tRNA aminoacylation (16.8%) arginyl-tRNA aminoacylation (16.3%)" "cytosol (16.8%) glycine-tRNA ligase complex (0%)" "glycine-tRNA ligase activity (16.8%) ATP binding (16.8%) arginine-tRNA ligase activity (16.3%)" "IPR006194 (33.7%) IPR015944 (33.7%) IPR008909 (32.6%)" "Glycine-tRNA synthetase, heterodimeric (33.7%) Glycine-tRNA ligase, beta subunit (33.7%) DALR anticodon binding (32.6%)" ILENGEVKPLDVK root "GO:0051085 (3.1%) GO:0006457 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (15.6%) GO:0005829 (0.1%) GO:1990220 (0.1%)" "GO:0005524 (16.3%) GO:0044183 (16.3%) GO:0046872 (16.1%)" "obsolete chaperone cofactor-dependent protein refolding (3.1%) protein folding (0.1%) response to heat (0.1%)" "cytoplasm (15.6%) cytosol (0.1%) GroEL-GroES complex (0.1%)" "ATP binding (16.3%) protein folding chaperone (16.3%) metal ion binding (16.1%)" "IPR011032 (25.1%) IPR020818 (25.1%) IPR037124 (25.1%)" "GroES-like superfamily (25.1%) GroES chaperonin family (25.1%) GroES chaperonin superfamily (25.1%)" GNKELIEIIGQAIDDEYIKELTTISLSPEAISR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (23.7%) GO:0006166 (23.7%)" "GO:0000287 (23.7%) GO:0008973 (23.7%) GO:0004614 (5.3%)" "carbohydrate metabolic process (23.7%) purine ribonucleoside salvage (23.7%)" "magnesium ion binding (23.7%) phosphopentomutase activity (23.7%) phosphoglucomutase activity (5.3%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" INTNLNAMIATNQMSK Romboutsia lituseburensis DSM 797 Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Romboutsia Romboutsia lituseburensis Romboutsia lituseburensis DSM 797 "GO:0005576 (33.3%) GO:0009288 (33.3%)" GO:0005198 (33.3%) "extracellular region (33.3%) bacterial-type flagellum (33.3%)" structural molecule activity (33.3%) "IPR001029 (25%) IPR001492 (25%) IPR042187 (25%)" "Flagellin, N-terminal domain (25%) Flagellin (25%) Flagellin, C-terminal domain, subdomain 2 (25%)" AIIAQVGAAGPKDMGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0016884 (90%) GO:0016740 (10%)" "carbon-nitrogen ligase activity, with glutamine as amido-N-donor (90%) transferase activity (10%)" "IPR003789 (25%) IPR019004 (25%) IPR023168 (25%)" "Aspartyl/glutamyl-tRNA amidotransferase subunit B-like (25%) Uncharacterised protein YqeY/Aim41 (25%) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 (25%)" ANYLDIPLYR Bacteria Bacteria 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.2%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.2%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020810 (16.8%) IPR020811 (16.6%)" "Enolase (16.8%) Enolase, C-terminal TIM barrel domain (16.8%) Enolase, N-terminal (16.6%)" VGLGAENCADKASGAYTGEVSAAMVASTGAK NLTAGELDNGYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.3.5.5 (90.3%) 6.3.4.16 (9.7%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (90.3%) carbamoyl-phosphate synthase (ammonia) (9.7%)" "GO:0006541 (14.2%) GO:0006221 (10.8%) GO:0006526 (10.7%)" GO:0005737 (14.2%) "GO:0004088 (14.2%) GO:0005524 (14.2%) GO:0046872 (14.1%)" "glutamine metabolic process (14.2%) pyrimidine nucleotide biosynthetic process (10.8%) L-arginine biosynthetic process (10.7%)" cytoplasm (14.2%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14.2%) ATP binding (14.2%) metal ion binding (14.1%)" "IPR011607 (10.2%) IPR036914 (10.2%) IPR005479 (10.1%)" "Methylglyoxal synthase-like domain (10.2%) Methylglyoxal synthase-like domain superfamily (10.2%) Carbamoyl phosphate synthase, ATP-binding domain (10.1%)" MKEEAAANAEADKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005737 (21.4%) GO:0070013 (7.1%)" "GO:0005524 (23.8%) GO:0051082 (23.8%) GO:0140662 (23.8%)" "cytoplasm (21.4%) intracellular organelle lumen (7.1%)" "ATP binding (23.8%) unfolded protein binding (23.8%) ATP-dependent protein folding chaperone (23.8%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" AVDNVNKVIAPAILGMSALNQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" HLLDVLVNIPTK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" AAVANFGNDIQVVGINDLLDADYLAYMLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (8.3%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (8.3%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" SDVLFNFNK root "GO:0034220 (20.4%) GO:0006811 (3.5%) GO:0006974 (0%)" "GO:0046930 (24.7%) GO:0009279 (24.7%) GO:0019867 (0.1%)" "GO:0015288 (24.7%) GO:0016740 (1.6%) GO:0015075 (0%)" "monoatomic ion transmembrane transport (20.4%) monoatomic ion transport (3.5%) DNA damage response (0%)" "pore complex (24.7%) cell outer membrane (24.7%) outer membrane (0.1%)" "porin activity (24.7%) transferase activity (1.6%) monoatomic ion transmembrane transporter activity (0%)" "IPR006665 (12.9%) IPR002368 (12.9%) IPR036737 (12.9%)" "OmpA-like domain (12.9%) Outer membrane protein, OmpA (12.9%) OmpA-like domain superfamily (12.9%)" TVTGEDVSQEDLGGASVHASK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.4.1.3 (75%) 6.-.-.- (25%)" "propionyl-CoA carboxylase (75%) Ligases (25%)" GO:0015977 (20.5%) GO:0009317 (20.5%) "GO:0004658 (24.1%) GO:0003989 (20.5%) GO:0016740 (12%)" carbon fixation (20.5%) acetyl-CoA carboxylase complex (20.5%) "propionyl-CoA carboxylase activity (24.1%) acetyl-CoA carboxylase activity (20.5%) transferase activity (12%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" KEDKPEMPMGAPGMGGMGGMM Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (16.9%) GO:0009408 (0.2%) GO:0051085 (0.2%)" "GO:0005737 (16.1%) GO:1990220 (0.2%)" "GO:0005524 (16.9%) GO:0140662 (16.9%) GO:0016853 (16.4%)" "protein refolding (16.9%) response to heat (0.2%) obsolete chaperone cofactor-dependent protein refolding (0.2%)" "cytoplasm (16.1%) GroEL-GroES complex (0.2%)" "ATP binding (16.9%) ATP-dependent protein folding chaperone (16.9%) isomerase activity (16.4%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) Chaperonin Cpn60, conserved site (16.7%)" IKEELANMNYLVEDWGGKYQSQEISAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.4%) IPR000795 (8.4%) IPR005225 (8.4%)" "Translation initiation factor IF-2, bacterial-like (8.4%) Translational (tr)-type GTP-binding domain (8.4%) Small GTP-binding domain (8.4%)" LNREEEDYELEVGSAGIGQPFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0000028 (33.3%) GO:0006412 (33.3%)" GO:0005829 (33.3%) "ribosomal small subunit assembly (33.3%) translation (33.3%)" cytosol (33.3%) "IPR003728 (26.1%) IPR028989 (26.1%) IPR035956 (26.1%)" "Ribosome maturation factor RimP (26.1%) Ribosome maturation factor RimP, N-terminal (26.1%) RimP, N-terminal domain superfamily (26.1%)" ILNVSVEEFSPSIAR root "GO:0003677 (97.2%) GO:0004252 (2.8%)" "DNA binding (97.2%) serine-type endopeptidase activity (2.8%)" "IPR001387 (16.7%) IPR010982 (16.7%) IPR015927 (16.7%)" "Cro/C1-type, helix-turn-helix domain (16.7%) Lambda repressor-like, DNA-binding domain superfamily (16.7%) Peptidase S24/S26A/S26B/S26C (16.7%)" FGGATGNFNAHHVAYPEYDWR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (22.9%) GO:0044208 (22.9%) GO:0006188 (8.6%)" "GO:0004018 (31.4%) GO:0070626 (14.3%)" "'de novo' IMP biosynthetic process (22.9%) 'de novo' AMP biosynthetic process (22.9%) IMP biosynthetic process (8.6%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (31.4%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (14.3%)" "IPR000362 (12.5%) IPR004769 (12.5%) IPR008948 (12.5%)" "Fumarate lyase family (12.5%) Adenylosuccinate lyase (12.5%) L-Aspartase-like (12.5%)" FGDQMNNVAVTDGDKVEAEQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.4 (100%) L-arabinose isomerase (100%) GO:0019569 (25%) GO:0005829 (25%) "GO:0008733 (25%) GO:0030145 (25%)" L-arabinose catabolic process to D-xylulose 5-phosphate (25%) cytosol (25%) "L-arabinose isomerase activity (25%) manganese ion binding (25%)" "IPR003762 (14.3%) IPR004216 (14.3%) IPR009015 (14.3%)" "L-arabinose isomerase (14.3%) L-fucose/L-arabinose isomerase, C-terminal (14.3%) L-fucose isomerase, N-terminal/central domain superfamily (14.3%)" KILDQGEAGDNVGLLLR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0006414 (0.1%) "GO:0005829 (15.7%) GO:0032045 (5.1%) GO:0005737 (2.2%)" "GO:0003746 (18.4%) GO:0005525 (18.4%) GO:0003924 (18%)" translational elongation (0.1%) "cytosol (15.7%) guanyl-nucleotide exchange factor complex (5.1%) cytoplasm (2.2%)" "translation elongation factor activity (18.4%) GTP binding (18.4%) GTPase activity (18%)" "IPR004161 (8.5%) IPR009000 (8.5%) IPR050055 (8.5%)" "Translation elongation factor EFTu-like, domain 2 (8.5%) Translation protein, beta-barrel domain superfamily (8.5%) Elongation factor Tu GTPase (8.5%)" AAAAGASGYSITSATNNNK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006950 (1.1%) GO:0006974 (1.1%)" GO:0042597 (97.8%) "response to stress (1.1%) DNA damage response (1.1%)" periplasmic space (97.8%) "IPR010854 (25.3%) IPR025543 (25.3%) IPR036275 (25.3%)" "YdgH/BhsA/McbA-like domain (25.3%) Dodecin-like (25.3%) YdgH-like superfamily (25.3%)" WAADIHITPDGR root "3.1.1.31 (99.9%) 3.1.1.- (0.1%)" "6-phosphogluconolactonase (99.9%) Carboxylic ester hydrolases (0.1%)" "GO:0006006 (25.8%) GO:0009051 (22.2%) GO:0006098 (0.1%)" "GO:0005829 (25.8%) GO:0016020 (0%)" "GO:0017057 (25.8%) GO:0016787 (0.3%) GO:0016853 (0.1%)" "glucose metabolic process (25.8%) pentose-phosphate shunt, oxidative branch (22.2%) pentose-phosphate shunt (0.1%)" "cytosol (25.8%) membrane (0%)" "6-phosphogluconolactonase activity (25.8%) hydrolase activity (0.3%) isomerase activity (0.1%)" "IPR019405 (20.6%) IPR050282 (20.6%) IPR015943 (20.5%)" "Lactonase, 7-bladed beta-propeller (20.6%) Cycloisomerase 2 (20.6%) WD40/YVTN repeat-like-containing domain superfamily (20.5%)" CSCTIGLGGGK Bacillota Bacteria Bacillati Bacillota 1.1.1.6 (100%) glycerol dehydrogenase (100%) "GO:0006091 (6.8%) GO:0019563 (6.8%)" GO:0005829 (28.8%) "GO:0046872 (28.8%) GO:0016614 (17.8%) GO:0008888 (11%)" "generation of precursor metabolites and energy (6.8%) glycerol catabolic process (6.8%)" cytosol (28.8%) "metal ion binding (28.8%) oxidoreductase activity, acting on CH-OH group of donors (17.8%) glycerol dehydrogenase (NAD+) activity (11%)" "IPR001670 (33.3%) IPR016205 (33.3%) IPR018211 (33.3%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (33.3%) Glycerol dehydrogenase (33.3%) Alcohol dehydrogenase, iron-type, conserved site (33.3%)" TINPIGQEINTLGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011051 (33.3%) IPR013096 (33.3%) IPR014710 (33.3%)" "RmlC-like cupin domain superfamily (33.3%) Cupin 2, conserved barrel (33.3%) RmlC-like jelly roll fold (33.3%)" RLPVFEQGILK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006508 (33.3%) GO:0005829 (33.3%) GO:0008237 (33.3%) proteolysis (33.3%) cytosol (33.3%) metallopeptidase activity (33.3%) "IPR002510 (16.7%) IPR035068 (16.7%) IPR036059 (16.7%)" "Metalloprotease TldD/E, N-terminal domain (16.7%) Metalloprotease TldD/PmbA, N-terminal (16.7%) Metalloprotease TldD/PmbA superfamily (16.7%)" KVAEFFGKEPR root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0006260 (0.1%) GO:0042026 (0.1%) GO:0051085 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0005524 (26.4%) GO:0140662 (26.4%) GO:0051082 (25%)" "DNA replication (0.1%) protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytosol (0.1%) cytoplasm (0%) plasma membrane (0%)" "ATP binding (26.4%) ATP-dependent protein folding chaperone (26.4%) unfolded protein binding (25%)" "IPR013126 (17%) IPR043129 (17%) IPR018181 (16.9%)" "Heat shock protein 70 family (17%) ATPase, nucleotide binding domain (17%) Heat shock protein 70, conserved site (16.9%)" IQCECNHSATHLLHEALR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR002318 (9.1%) IPR003156 (9.1%) IPR009000 (9.1%)" "Alanine-tRNA ligase, class IIc (9.1%) DHHA1 domain (9.1%) Translation protein, beta-barrel domain superfamily (9.1%)" VKAIYDQIPEKLTINVDHLGLGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" YFDSGAAVANFPLATSER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006260 (33.3%) GO:0009295 (33.3%) GO:0003697 (33.3%) DNA replication (33.3%) nucleoid (33.3%) single-stranded DNA binding (33.3%) "IPR000424 (33.3%) IPR011344 (33.3%) IPR012340 (33.3%)" "Primosome PriB/single-strand DNA-binding (33.3%) Single-stranded DNA-binding protein (33.3%) Nucleic acid-binding, OB-fold (33.3%)" QVIQAQMPGVIQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.1.70 (100%) Transferred entry: 7.2.4.5 (100%) GO:0016829 (100%) lyase activity (100%) "IPR000089 (33.3%) IPR011053 (33.3%) IPR050709 (33.3%)" "Biotin/lipoyl attachment (33.3%) Single hybrid motif (33.3%) Biotin Carboxyl Carrier/Decarboxylase Components (33.3%)" IINLSETDSILNQYVSEIR Pseudomonadati Bacteria Pseudomonadati 2.4.2.9 (100%) uracil phosphoribosyltransferase (100%) "GO:0005525 (46.4%) GO:0016757 (42.9%) GO:0004845 (10.7%)" "GTP binding (46.4%) glycosyltransferase activity (42.9%) uracil phosphoribosyltransferase activity (10.7%)" "IPR029057 (51.7%) IPR000836 (48.3%)" "Phosphoribosyltransferase-like (51.7%) Phosphoribosyltransferase domain (48.3%)" SGAVDVIVVDSVAALTPK root 3.6.1.15 (100%) nucleoside-triphosphate phosphatase (100%) "GO:0006310 (13.2%) GO:0006281 (13.2%) GO:0009432 (11.9%)" "GO:0005829 (13.2%) GO:0005737 (0.1%) GO:0009355 (0%)" "GO:0003697 (13.2%) GO:0005524 (13.2%) GO:0140664 (13.2%)" "DNA recombination (13.2%) DNA repair (13.2%) SOS response (11.9%)" "cytosol (13.2%) cytoplasm (0.1%) DNA polymerase V complex (0%)" "single-stranded DNA binding (13.2%) ATP binding (13.2%) ATP-dependent DNA damage sensor activity (13.2%)" "IPR013765 (12.4%) IPR049428 (12.4%) IPR020588 (12.4%)" "DNA recombination and repair protein RecA (12.4%) RecA-like, N-terminal (12.4%) DNA recombination and repair protein RecA-like, ATP-binding domain (12.4%)" SALAEAFEIKK Bacteria Bacteria "2.1.3.11 (80%) 2.1.3.9 (20%)" "N-succinylornithine carbamoyltransferase (80%) N-acetylornithine carbamoyltransferase (20%)" "GO:0019240 (23.4%) GO:0042450 (23.4%) GO:0006520 (0.4%)" "GO:0016597 (23.8%) GO:0004585 (23.4%) GO:0043857 (4.6%)" "citrulline biosynthetic process (23.4%) L-arginine biosynthetic process via ornithine (23.4%) amino acid metabolic process (0.4%)" "amino acid binding (23.8%) ornithine carbamoyltransferase activity (23.4%) N-acetylornithine carbamoyltransferase activity (4.6%)" "IPR006132 (20.4%) IPR006131 (20%) IPR036901 (20%)" "Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20.4%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%) Aspartate/ornithine carbamoyltransferase superfamily (20%)" GEILGGMAAVEQPEKPAAQPK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (20%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (20%) GO:0005840 (0.4%) GO:0005737 (0%)" "GO:0003735 (20%) GO:0019843 (19.7%) GO:0003729 (19.7%)" "translation (20%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (20%) ribosome (0.4%) cytoplasm (0%)" "structural constituent of ribosome (20%) rRNA binding (19.7%) mRNA binding (19.7%)" "IPR001351 (11.3%) IPR036419 (11.3%) IPR005704 (11.2%)" "Small ribosomal subunit protein uS3, C-terminal (11.3%) Ribosomal protein S3, C-terminal domain superfamily (11.3%) Small ribosomal subunit protein uS3, bacteria (11.2%)" AISDFVNDNLSNWYVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.4%) GO:0005737 (14.1%) "GO:0000049 (14.4%) GO:0004822 (14.4%) GO:0005524 (14.4%)" isoleucyl-tRNA aminoacylation (14.4%) cytoplasm (14.1%) "tRNA binding (14.4%) isoleucine-tRNA ligase activity (14.4%) ATP binding (14.4%)" "IPR002300 (12.6%) IPR009080 (12.6%) IPR013155 (12.6%)" "Aminoacyl-tRNA synthetase, class Ia (12.6%) Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (12.6%) Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding (12.6%)" EKATSNICTAQALLATMAGFYAVYHGAEGLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" ALQCGTSHFLGQNFAK root 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.3%) IPR004154 (11.3%) IPR004499 (11.3%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.3%) Anticodon-binding (11.3%) Proline-tRNA ligase, class IIa, archaeal-type (11.3%)" NAIGGVCLNEGCIPTK Bacteria Bacteria 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (25.4%) GO:0005737 (23.9%) "GO:0004148 (25.4%) GO:0050660 (25.4%)" 2-oxoglutarate metabolic process (25.4%) cytoplasm (23.9%) "dihydrolipoyl dehydrogenase (NADH) activity (25.4%) flavin adenine dinucleotide binding (25.4%)" "IPR004099 (12.6%) IPR006258 (12.6%) IPR012999 (12.6%)" "Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.6%) Dihydrolipoamide dehydrogenase (12.6%) Pyridine nucleotide-disulphide oxidoreductase, class I, active site (12.6%)" KQAQEAVSNQATR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25.9%) IPR005706 (25.9%) IPR023591 (25.9%)" "Small ribosomal subunit protein uS2 (25.9%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.9%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.9%)" LVSPYDGNHMAVMYTAPDASK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.22 (100%) alpha-galactosidase (100%) GO:0016052 (48.1%) "GO:0004557 (48.1%) GO:0016798 (3.7%)" carbohydrate catabolic process (48.1%) "alpha-galactosidase activity (48.1%) hydrolase activity, acting on glycosyl bonds (3.7%)" "IPR000111 (11.1%) IPR002252 (11.1%) IPR013780 (11.1%)" "Glycoside hydrolase family 27/36, conserved site (11.1%) Glycoside hydrolase family 36 (11.1%) Glycosyl hydrolase, all-beta (11.1%)" ACELCEQFAKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (16.7%) IPR006099 (16.7%) IPR006158 (16.7%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-binding domain (16.7%)" IDETIMFLPLTEKDIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0034605 (20%) GO:0042026 (20%)" GO:0005737 (20%) "GO:0005524 (20%) GO:0016887 (20%)" "cellular response to heat (20%) protein refolding (20%)" cytoplasm (20%) "ATP binding (20%) ATP hydrolysis activity (20%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" ACGADVPFAENPAAIYAATRNELYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" AVECGYWHLWR Bacteria Bacteria "1.2.7.1 (75.8%) 1.2.1.51 (12.1%) 1.2.7.- (12.1%)" "pyruvate synthase (75.8%) pyruvate dehydrogenase (NADP(+)) (12.1%) With an iron-sulfur protein as acceptor (12.1%)" "GO:0006979 (14.9%) GO:0022900 (14.4%) GO:0044281 (11.9%)" "GO:0030976 (14.6%) GO:0005506 (14.4%) GO:0051539 (14.4%)" "response to oxidative stress (14.9%) electron transport chain (14.4%) small molecule metabolic process (11.9%)" "thiamine pyrophosphate binding (14.6%) iron ion binding (14.4%) 4 iron, 4 sulfur cluster binding (14.4%)" "IPR050722 (7.9%) IPR029061 (7.9%) IPR011766 (7.8%)" "Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.9%) Thiamin diphosphate-binding fold (7.9%) Thiamine pyrophosphate enzyme, TPP-binding (7.8%)" KGDTVYVNSGEDKGKTGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (19.9%) "GO:0005840 (20.3%) GO:1990904 (19.9%)" "GO:0003735 (19.9%) GO:0019843 (19.9%)" translation (19.9%) "ribosome (20.3%) ribonucleoprotein complex (19.9%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%)" "IPR003256 (16.7%) IPR005824 (16.7%) IPR008991 (16.7%)" "Large ribosomal subunit protein uL24 (16.7%) KOW (16.7%) Translation protein SH3-like domain superfamily (16.7%)" NSQFATPLFEFSGACSGCGETPYVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (74.1%) 1.2.7.- (20.7%) 1.2.1.51 (5.2%)" "pyruvate synthase (74.1%) With an iron-sulfur protein as acceptor (20.7%) pyruvate dehydrogenase (NADP(+)) (5.2%)" "GO:0006979 (14.7%) GO:0022900 (14.6%) GO:0044281 (11.9%)" "GO:0005506 (14.6%) GO:0051539 (14.6%) GO:0030976 (14.5%)" "response to oxidative stress (14.7%) electron transport chain (14.6%) small molecule metabolic process (11.9%)" "iron ion binding (14.6%) 4 iron, 4 sulfur cluster binding (14.6%) thiamine pyrophosphate binding (14.5%)" "IPR017896 (7.8%) IPR017900 (7.8%) IPR029061 (7.8%)" "4Fe-4S ferredoxin-type, iron-sulphur binding domain (7.8%) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (7.8%) Thiamin diphosphate-binding fold (7.8%)" DLNGLTEEQFVER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR008323 (100%) Uncharacterised conserved protein UCP033563 (100%) TTEKDVTKPVYGVNAK Phocaeicola vulgatus Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus GO:0009279 (100%) cell outer membrane (100%) "IPR012944 (34.1%) IPR033985 (34.1%) IPR011990 (31.7%)" "RagB/SusD domain (34.1%) SusD-like, N-terminal (34.1%) Tetratricopeptide-like helical domain superfamily (31.7%)" GIIAALGPDGKPSR root 3.5.2.6 (100%) beta-lactamase (100%) "GO:0030655 (33.3%) GO:0046677 (33.2%) GO:0015074 (0%)" "GO:0008800 (33.3%) GO:0016787 (0.1%) GO:0046872 (0%)" "beta-lactam antibiotic catabolic process (33.3%) response to antibiotic (33.2%) DNA integration (0%)" "beta-lactamase activity (33.3%) hydrolase activity (0.1%) metal ion binding (0%)" "IPR012338 (26.3%) IPR000871 (25.6%) IPR045155 (24.4%)" "Beta-lactamase/transpeptidase-like (26.3%) Beta-lactamase, class-A (25.6%) Beta-lactamase class A, catalytic domain (24.4%)" CQLVGDDLFVTNVK Bacteria Bacteria 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.6%) GO:0009986 (16.6%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.6%) cell surface (16.6%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.7%) IPR020810 (16.7%) IPR020809 (16.7%)" "Enolase (16.7%) Enolase, C-terminal TIM barrel domain (16.7%) Enolase, conserved site (16.7%)" IYDDPNMSLDLYTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" METVVSGIRPTGNLHLGNYFGAVK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (24.7%) "GO:0005829 (24.7%) GO:0005739 (1.1%)" "GO:0004830 (24.7%) GO:0005524 (24.7%)" tryptophanyl-tRNA aminoacylation (24.7%) "cytosol (24.7%) mitochondrion (1.1%)" "tryptophan-tRNA ligase activity (24.7%) ATP binding (24.7%)" "IPR001412 (16.7%) IPR002305 (16.7%) IPR002306 (16.7%)" "Aminoacyl-tRNA synthetase, class I, conserved site (16.7%) Aminoacyl-tRNA synthetase, class Ic (16.7%) Tryptophan-tRNA ligase (16.7%)" GYLSPYFINKPETGAVELESPFILLADKK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.2%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (16.8%) GO:1990220 (0%) GO:0005829 (0%)" "GO:0140662 (17.2%) GO:0005524 (17.2%) GO:0016853 (17.1%)" "protein refolding (17.2%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (16.8%) GroEL-GroES complex (0%) cytosol (0%)" "ATP-dependent protein folding chaperone (17.2%) ATP binding (17.2%) isomerase activity (17.1%)" "IPR001844 (17%) IPR027409 (17%) IPR002423 (17%)" "Chaperonin Cpn60/GroEL (17%) GroEL-like apical domain superfamily (17%) Chaperonin Cpn60/GroEL/TCP-1 family (17%)" LTEQYLETVTKEGGAVENIDIWGR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" GYVSAEENKTEHMPIGVLPVDSIYTPVEK Romboutsia Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Romboutsia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.2%) "GO:0000428 (17.2%) GO:0005737 (13.8%)" "GO:0003677 (17.2%) GO:0003899 (17.2%) GO:0046983 (17.2%)" DNA-templated transcription (17.2%) "DNA-directed RNA polymerase complex (17.2%) cytoplasm (13.8%)" "DNA binding (17.2%) DNA-directed RNA polymerase activity (17.2%) protein dimerization activity (17.2%)" "IPR011260 (17.9%) IPR011263 (17.9%) IPR011773 (17.9%)" "RNA polymerase, alpha subunit, C-terminal (17.9%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (17.9%) DNA-directed RNA polymerase, alpha subunit (17.9%)" VEELMDTVQDTLNDLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.4%) GO:0005737 (13.8%) "GO:0000049 (14.4%) GO:0002161 (14.4%) GO:0004813 (14.4%)" alanyl-tRNA aminoacylation (14.4%) cytoplasm (13.8%) "tRNA binding (14.4%) aminoacyl-tRNA deacylase activity (14.4%) alanine-tRNA ligase activity (14.4%)" "IPR003156 (9.3%) IPR012947 (9.3%) IPR018164 (9.3%)" "DHHA1 domain (9.3%) Threonyl/alanyl tRNA synthetase, SAD (9.3%) Alanyl-tRNA synthetase, class IIc, N-terminal (9.3%)" TIAFSITDGQLPSNAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR002318 (9.2%) IPR018164 (9.2%) IPR050058 (9.2%)" "Alanine-tRNA ligase, class IIc (9.2%) Alanyl-tRNA synthetase, class IIc, N-terminal (9.2%) Alanine--tRNA ligase (9.2%)" FKAGAELNELIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" VTSCGVTWGFRPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.1.3.18 (98.8%) 3.-.-.- (1.2%)" "phosphoglycolate phosphatase (98.8%) Hydrolases (1.2%)" GO:0006281 (33.2%) GO:0005829 (33.2%) "GO:0008967 (33.2%) GO:0016787 (0.4%)" DNA repair (33.2%) cytosol (33.2%) "phosphoglycolate phosphatase activity (33.2%) hydrolase activity (0.4%)" "IPR006439 (16.6%) IPR023198 (16.6%) IPR023214 (16.6%)" "HAD hydrolase, subfamily IA (16.6%) Phosphoglycolate phosphatase-like, domain 2 (16.6%) HAD superfamily (16.6%)" AEAIHYIGDLVQR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.6%) GO:0006352 (0%) GO:0006879 (0%)" "GO:0000428 (16.8%) GO:0005737 (16.4%) GO:0000345 (0%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.6%)" "DNA-templated transcription (16.6%) DNA-templated transcription initiation (0%) intracellular iron ion homeostasis (0%)" "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.4%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.6%)" "IPR011260 (16.8%) IPR036603 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.8%) RNA polymerase, RBP11-like subunit (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" ATSEQLREYLAEVLPDFDRDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR049280 (25.7%) IPR049281 (25.7%) IPR041218 (24.3%)" "Domain of unknown function DUF6852 (25.7%) BVU_3817-like, C-terminal domain superfamily (25.7%) Domain of unknown function DUF5606 (24.3%)" DFPGGWTDDKENALTPEGR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.54 (100%) cyclomaltodextrinase (100%) GO:0005975 (47.8%) "GO:0016798 (39.1%) GO:0047798 (8.7%) GO:0016787 (4.3%)" carbohydrate metabolic process (47.8%) "hydrolase activity, acting on glycosyl bonds (39.1%) cyclomaltodextrinase activity (8.7%) hydrolase activity (4.3%)" "IPR006047 (14.3%) IPR013780 (14.3%) IPR013783 (14.3%)" "Glycosyl hydrolase family 13, catalytic domain (14.3%) Glycosyl hydrolase, all-beta (14.3%) Immunoglobulin-like fold (14.3%)" FLEQQIVDKLEVMDENDRIWGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" SLEVFEKLEAK Bacteria Bacteria "GO:0043093 (32.4%) GO:0000917 (32.3%) GO:0016192 (1.2%)" "GO:0005737 (32.3%) GO:0016020 (1.2%) GO:0005829 (0.1%)" GO:0042802 (0.1%) "FtsZ-dependent cytokinesis (32.4%) division septum assembly (32.3%) vesicle-mediated transport (1.2%)" "cytoplasm (32.3%) membrane (1.2%) cytosol (0.1%)" identical protein binding (0.1%) "IPR009252 (96.5%) IPR010989 (3.5%)" "Cell division protein ZapB (96.5%) SNARE (3.5%)" ALMGSNMMR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (21.1%) GO:0006508 (0.1%)" "GO:0000428 (20.4%) GO:0009507 (0%) GO:0016020 (0%)" "GO:0003899 (21.1%) GO:0003677 (18.6%) GO:0032549 (18.5%)" "DNA-templated transcription (21.1%) proteolysis (0.1%)" "DNA-directed RNA polymerase complex (20.4%) chloroplast (0%) membrane (0%)" "DNA-directed RNA polymerase activity (21.1%) DNA binding (18.6%) ribonucleoside binding (18.5%)" "IPR019462 (9.1%) IPR042107 (8.7%) IPR015712 (8%)" "DNA-directed RNA polymerase, beta subunit, external 1 domain (9.1%) DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily (8.7%) DNA-directed RNA polymerase, subunit 2 (8%)" VINGFMIQGGGFEPGMK root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (33.2%) GO:0009245 (0.1%) GO:0061077 (0.1%)" "GO:0005737 (32.7%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0003755 (33.3%) GO:0016853 (0.4%) GO:0008758 (0.1%)" "protein folding (33.2%) lipid A biosynthetic process (0.1%) obsolete chaperone-mediated protein folding (0.1%)" "cytoplasm (32.7%) cytosol (0.1%) plasma membrane (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (33.3%) isomerase activity (0.4%) UDP-2,3-diacylglucosamine hydrolase activity (0.1%)" "IPR002130 (20%) IPR020892 (20%) IPR029000 (20%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (20%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (20%) Cyclophilin-like domain superfamily (20%)" IIREELFGNGFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.16.1.1 (100%) mercury(II) reductase (100%) "GO:0003955 (30.2%) GO:0016668 (30.2%) GO:0050660 (30.2%)" "NAD(P)H dehydrogenase (quinone) activity (30.2%) oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (30.2%) flavin adenine dinucleotide binding (30.2%)" "IPR001100 (16.7%) IPR004099 (16.7%) IPR012999 (16.7%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (16.7%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (16.7%) Pyridine nucleotide-disulphide oxidoreductase, class I, active site (16.7%)" AVENINTLIAPALK root 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (17.4%) "GO:0000015 (17.4%) GO:0005576 (15.2%) GO:0009986 (15.2%)" "GO:0000287 (17.4%) GO:0004634 (17.4%)" glycolytic process (17.4%) "phosphopyruvate hydratase complex (17.4%) extracellular region (15.2%) cell surface (15.2%)" "magnesium ion binding (17.4%) phosphopyruvate hydratase activity (17.4%)" "IPR000941 (16.8%) IPR020809 (16.8%) IPR020810 (16.8%)" "Enolase (16.8%) Enolase, conserved site (16.8%) Enolase, C-terminal TIM barrel domain (16.8%)" AFPEIIESTTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR032573 (100%) Protein of unknown function DUF4925 (100%) SAIVWLCQLTGKPILK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.4%) GO:0006044 (32.4%)" "GO:0004342 (32.7%) GO:0016853 (2.5%)" "carbohydrate metabolic process (32.4%) N-acetylglucosamine metabolic process (32.4%)" "glucosamine-6-phosphate deaminase activity (32.7%) isomerase activity (2.5%)" "IPR003737 (15.2%) IPR052960 (15.2%) IPR024078 (15.1%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (15.2%) Glucosamine-6-phosphate deaminase-like (15.2%) Putative deacetylase LmbE-like domain superfamily (15.1%)" LTAEMDPANLK Pseudomonadati Bacteria Pseudomonadati "1.2.1.- (95.8%) 1.2.1.12 (4.2%)" "With NAD(+) or NADP(+) as acceptor (95.8%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (4.2%)" "GO:0006006 (16.8%) GO:0006096 (16.1%)" GO:0005737 (16.1%) "GO:0051287 (17.2%) GO:0050661 (16.8%) GO:0004365 (9.1%)" "glucose metabolic process (16.8%) glycolytic process (16.1%)" cytoplasm (16.1%) "NAD binding (17.2%) NADP binding (16.8%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (9.1%)" "IPR020828 (16.8%) IPR020831 (16.8%) IPR036291 (16.8%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.8%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (16.8%) NAD(P)-binding domain superfamily (16.8%)" ITNAGVLESHPHDVAITSEAPNYSRPQ Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20.2%) GO:0006183 (20.2%)" "GO:0003938 (20.2%) GO:0046872 (20.2%) GO:0000166 (19.4%)" "GMP biosynthetic process (20.2%) GTP biosynthetic process (20.2%)" "IMP dehydrogenase activity (20.2%) metal ion binding (20.2%) nucleotide binding (19.4%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" EFGISIPDDQAEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0009245 (17.6%) "GO:0005829 (17.6%) GO:0016020 (17.6%)" "GO:0000035 (17.6%) GO:0000036 (17.6%) GO:0031177 (11.8%)" lipid A biosynthetic process (17.6%) "cytosol (17.6%) membrane (17.6%)" "acyl binding (17.6%) acyl carrier activity (17.6%) phosphopantetheine binding (11.8%)" "IPR009081 (21.7%) IPR036736 (21.7%) IPR003231 (21.2%)" "Phosphopantetheine binding ACP domain (21.7%) ACP-like superfamily (21.7%) Acyl carrier protein (21.2%)" RFHTLSGGKPQVEGAEDYTDSDD root "GO:0007059 (25%) GO:0044010 (25%) GO:0051276 (25%)" GO:0005829 (25%) "chromosome segregation (25%) single-species biofilm formation (25%) chromosome organization (25%)" cytosol (25%) IPR007335 (100%) Protein of unknown function DUF413 (100%) YASAQGLKPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016740 (100%) transferase activity (100%) "IPR016181 (33.3%) IPR031165 (33.3%) IPR045057 (33.3%)" "Acyl-CoA N-acyltransferase (33.3%) Yjdj-type Gcn5-related N-acetyltransferase (33.3%) Gcn5-related N-acetyltransferase (33.3%)" WFGVTYAADR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016740 (100%) transferase activity (100%) "IPR029044 (87.3%) IPR005835 (12.7%)" "Nucleotide-diphospho-sugar transferases (87.3%) Nucleotidyl transferase domain (12.7%)" VTAEKDPANLRWSEVGAEYVVESTGLFLTK GALDWMGPFHDAIKPVVQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.86 (97.6%) 1.1.1.- (2.4%)" "ketol-acid reductoisomerase (NADP(+)) (97.6%) With NAD(+) or NADP(+) as acceptor (2.4%)" "GO:0009097 (21.1%) GO:0009099 (21.1%)" GO:0070013 (1.1%) "GO:0004455 (21.1%) GO:0046872 (20.5%) GO:0016853 (15.3%)" "isoleucine biosynthetic process (21.1%) L-valine biosynthetic process (21.1%)" intracellular organelle lumen (1.1%) "ketol-acid reductoisomerase activity (21.1%) metal ion binding (20.5%) isomerase activity (15.3%)" "IPR000506 (16.8%) IPR008927 (16.8%) IPR013023 (16.8%)" "Ketol-acid reductoisomerase, C-terminal (16.8%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.8%) Ketol-acid reductoisomerase (16.8%)" SAVGYQPTLAEEMGVLQER root "7.1.2.2 (97.3%) 3.6.3.14 (2.6%) 3.6.1.15 (0%)" "H(+)-transporting two-sector ATPase (97.3%) Transferred entry: 7.1.2.2 (2.6%) nucleoside-triphosphate phosphatase (0%)" "GO:0042742 (0%) GO:0042777 (0%) GO:1901605 (0%)" "GO:0045259 (24.5%) GO:0005886 (21.2%) GO:0016020 (0%)" "GO:0005524 (24.5%) GO:0046933 (24.5%) GO:0016787 (4.2%)" "defense response to bacterium (0%) proton motive force-driven plasma membrane ATP synthesis (0%) alpha-amino acid metabolic process (0%)" "proton-transporting ATP synthase complex (24.5%) plasma membrane (21.2%) membrane (0%)" "ATP binding (24.5%) proton-transporting ATP synthase activity, rotational mechanism (24.5%) hydrolase activity (4.2%)" "IPR000194 (11.2%) IPR050053 (11.2%) IPR027417 (11.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11.2%) ATPase alpha/beta chains (11.2%) P-loop containing nucleoside triphosphate hydrolase (11.2%)" ATVNKEWVIVDAEGQTLGR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006412 (20%) GO:0017148 (20%)" GO:0022625 (20%) "GO:0003729 (20%) GO:0003735 (20%)" "translation (20%) negative regulation of translation (20%)" cytosolic large ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%)" "IPR005822 (25.6%) IPR005823 (25.6%) IPR036899 (24.8%)" "Large ribosomal subunit protein uL13 (25.6%) Large ribosomal subunit protein uL13, bacteria (25.6%) Large ribosomal subunit protein uL13 superfamily (24.8%)" GNSYITPQSHSILPSITNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (18.8%) GO:0009098 (18.8%) GO:0009099 (18.8%)" "GO:0004084 (21.2%) GO:0052654 (3.5%) GO:0052655 (3.5%)" "isoleucine biosynthetic process (18.8%) L-leucine biosynthetic process (18.8%) L-valine biosynthetic process (18.8%)" "branched-chain-amino-acid transaminase activity (21.2%) L-leucine-2-oxoglutarate transaminase activity (3.5%) L-valine-2-oxoglutarate transaminase activity (3.5%)" "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" ALDVDGIIAQLK Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus GO:0006412 (24.6%) "GO:0022625 (23.7%) GO:0005840 (2.6%) GO:1990904 (0.9%)" "GO:0003735 (24.6%) GO:0003729 (23.7%)" translation (24.6%) "cytosolic large ribosomal subunit (23.7%) ribosome (2.6%) ribonucleoprotein complex (0.9%)" "structural constituent of ribosome (24.6%) mRNA binding (23.7%)" "IPR008932 (20.1%) IPR013823 (20.1%) IPR014719 (20.1%)" "Large ribosomal subunit protein bL12, oligomerization (20.1%) Large ribosomal subunit protein bL12, C-terminal (20.1%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20.1%)" VSLYLLDTDNEMNSEFDRPITHQLYGGDWENR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" VPVQQTGTYSEATKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides LDLSIQVHPDDELAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (16.7%) IPR014628 (16.7%) IPR014710 (16.7%)" "RmlC-like cupin domain superfamily (16.7%) Mannose-6-phosphate isomerase, Firmicutes type, short form (16.7%) RmlC-like jelly roll fold (16.7%)" SKPHVNIGTIGHVDHGKTTLTAAITTVLAK root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0006414 (0.1%) "GO:0005829 (18.1%) GO:0032045 (5.1%) GO:0005737 (0.1%)" "GO:0003746 (18.4%) GO:0003924 (18.2%) GO:0005525 (18.2%)" translational elongation (0.1%) "cytosol (18.1%) guanyl-nucleotide exchange factor complex (5.1%) cytoplasm (0.1%)" "translation elongation factor activity (18.4%) GTPase activity (18.2%) GTP binding (18.2%)" "IPR000795 (8.4%) IPR005225 (8.4%) IPR031157 (8.4%)" "Translational (tr)-type GTP-binding domain (8.4%) Small GTP-binding domain (8.4%) Tr-type G domain, conserved site (8.4%)" QGKFPEAAEQYQLIAGQGEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016020 (66.7%) GO:0016740 (33.3%) membrane (66.7%) transferase activity (33.3%) "IPR011990 (29%) IPR019734 (29%) IPR051685 (22.6%)" "Tetratricopeptide-like helical domain superfamily (29%) Tetratricopeptide repeat (29%) Ycf3/AcsC/BcsC/TPR Multifunctional (22.6%)" EAQTMFKDYQAASAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" SELEQIISETKQDEEKLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" AIVDDIDHLSNR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.4%) GO:0006508 (1.7%)" GO:0000428 (19.2%) "GO:0003677 (19.4%) GO:0003899 (19.4%) GO:0032549 (19.2%)" "DNA-templated transcription (19.4%) proteolysis (1.7%)" DNA-directed RNA polymerase complex (19.2%) "DNA binding (19.4%) DNA-directed RNA polymerase activity (19.4%) ribonucleoside binding (19.2%)" "IPR007642 (7.7%) IPR007120 (7.7%) IPR007121 (7.7%)" "RNA polymerase Rpb2, domain 2 (7.7%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.7%) RNA polymerase, beta subunit, conserved site (7.7%)" MNIKPLADR Bacteria Bacteria GO:0051085 (1%) GO:0005737 (16%) "GO:0005524 (16.6%) GO:0044183 (16.6%) GO:0046872 (16.6%)" obsolete chaperone cofactor-dependent protein refolding (1%) cytoplasm (16%) "ATP binding (16.6%) protein folding chaperone (16.6%) metal ion binding (16.6%)" "IPR011032 (29.8%) IPR020818 (29.8%) IPR037124 (29.8%)" "GroES-like superfamily (29.8%) GroES chaperonin family (29.8%) GroES chaperonin superfamily (29.8%)" VTSNNVAALVPGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (14.6%) GO:0032259 (9.3%) GO:0006546 (1.6%)" "GO:0005829 (16.3%) GO:0005960 (16.3%)" "GO:0004047 (16.3%) GO:0008483 (15.9%) GO:0008168 (9.3%)" "glycine decarboxylation via glycine cleavage system (14.6%) methylation (9.3%) glycine catabolic process (1.6%)" "cytosol (16.3%) glycine cleavage complex (16.3%)" "aminomethyltransferase activity (16.3%) transaminase activity (15.9%) methyltransferase activity (9.3%)" "IPR006222 (14.6%) IPR006223 (14.6%) IPR027266 (14.6%)" "GCVT, N-terminal domain (14.6%) Glycine cleavage system T protein (14.6%) Aminomethyltransferase superfamily (14.6%)" SQSTNDAYPTAIHIGMYYTHLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.8%) GO:0006531 (24.8%)" GO:0005829 (24.8%) "GO:0008797 (24.8%) GO:0016853 (0.8%)" "tricarboxylic acid cycle (24.8%) aspartate metabolic process (24.8%)" cytosol (24.8%) "aspartate ammonia-lyase activity (24.8%) isomerase activity (0.8%)" "IPR000362 (12.9%) IPR008948 (12.9%) IPR018951 (12.9%)" "Fumarate lyase family (12.9%) L-Aspartase-like (12.9%) Fumarase C, C-terminal (12.9%)" DLENAAILYDEIDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" QEAPIHISNLNPVDPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (19.1%) GO:0003723 (0.9%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (19.1%) RNA binding (0.9%)" "IPR003256 (17.1%) IPR008991 (17.1%) IPR014722 (17.1%)" "Large ribosomal subunit protein uL24 (17.1%) Translation protein SH3-like domain superfamily (17.1%) Large ribosomal subunit protein uL2, domain 2 (17.1%)" HNGTIYLMDEIHTPDSSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25.1%) GO:0005737 (24.8%) "GO:0004639 (25.1%) GO:0005524 (25.1%)" 'de novo' IMP biosynthetic process (25.1%) cytoplasm (24.8%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25.1%) ATP binding (25.1%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" NRWDMMEQLREDIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.5.1.4 (100%) inositol-3-phosphate synthase (100%) "GO:0006021 (32.4%) GO:0008654 (32.4%)" GO:0016020 (2.9%) GO:0004512 (32.4%) "inositol biosynthetic process (32.4%) phospholipid biosynthetic process (32.4%)" membrane (2.9%) inositol-3-phosphate synthase activity (32.4%) "IPR002587 (33.3%) IPR013021 (33.3%) IPR036291 (33.3%)" "Myo-inositol-1-phosphate synthase (33.3%) Myo-inositol-1-phosphate synthase, GAPDH-like (33.3%) NAD(P)-binding domain superfamily (33.3%)" RFHDGETITIEPWR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0009060 (25%) GO:0022904 (25%)" "GO:0009055 (25%) GO:0051537 (25%)" "aerobic respiration (25%) respiratory electron transport chain (25%)" "electron transfer activity (25%) 2 iron, 2 sulfur cluster binding (25%)" "IPR006058 (14.3%) IPR009051 (14.3%) IPR012675 (14.3%)" "2Fe-2S ferredoxin, iron-sulphur binding site (14.3%) Alpha-helical ferredoxin (14.3%) Beta-grasp domain superfamily (14.3%)" KVEGVGYSQYNESETPEQNRR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (20%) IPR006665 (20%) IPR036737 (20%)" "Outer membrane protein, bacterial (20%) OmpA-like domain (20%) OmpA-like domain superfamily (20%)" GVRPPKEFIEEVASRPYDVLNSQEAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR008323 (100%) Uncharacterised conserved protein UCP033563 (100%) LIIQPDYQSVSQWAAHYVAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.2%) GO:0006043 (14.2%) GO:0006046 (14.2%)" "GO:0005829 (13.2%) GO:0005737 (1.1%)" "GO:0004342 (14.2%) GO:0042802 (14.2%) GO:0016853 (0.4%)" "carbohydrate metabolic process (14.2%) glucosamine catabolic process (14.2%) N-acetylglucosamine catabolic process (14.2%)" "cytosol (13.2%) cytoplasm (1.1%)" "glucosamine-6-phosphate deaminase activity (14.2%) identical protein binding (14.2%) isomerase activity (0.4%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" SSFQSPAYLSIEMIAAAMGGQPFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.37 (88.9%) 1.1.1.- (11.1%)" "malate dehydrogenase (88.9%) With NAD(+) or NADP(+) as acceptor (11.1%)" "GO:0006108 (34.8%) GO:0006099 (0.6%) GO:0006107 (0.6%)" "GO:0016615 (28.4%) GO:0016616 (28.4%) GO:0030060 (6.5%)" "malate metabolic process (34.8%) tricarboxylic acid cycle (0.6%) oxaloacetate metabolic process (0.6%)" "malate dehydrogenase activity (28.4%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (28.4%) L-malate dehydrogenase (NAD+) activity (6.5%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" YMELTSDIIDNYRNTGGFDMIGSGR YIPTMLNYQTHIDGGSMFNTPPVLPIYAALQTLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.8%) GO:0008615 (19.8%)" GO:0005737 (19.8%) "GO:0004648 (19.8%) GO:0030170 (19.8%) GO:0008483 (1%)" "L-serine biosynthetic process (19.8%) pyridoxine biosynthetic process (19.8%)" cytoplasm (19.8%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.8%) pyridoxal phosphate binding (19.8%) transaminase activity (1%)" "IPR000192 (20.6%) IPR022278 (20.6%) IPR015421 (19.6%)" "Aminotransferase class V domain (20.6%) Phosphoserine aminotransferase (20.6%) Pyridoxal phosphate-dependent transferase, major domain (19.6%)" EAQALCAVPMKDKESVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" SLVHNMVVGVSEGYKKELELVGVGYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0002181 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.4%)" "GO:0003735 (24.9%) GO:0019843 (24.9%)" cytoplasmic translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.4%)" "structural constituent of ribosome (24.9%) rRNA binding (24.9%)" "IPR000702 (20%) IPR002358 (20%) IPR019906 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, conserved site (20%) Large ribosomal subunit protein uL6, bacteria (20%)" HLQAVAENPENKEAAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR006597 (22.9%) IPR011990 (22.9%) IPR019734 (22.9%)" "Sel1-like repeat (22.9%) Tetratricopeptide-like helical domain superfamily (22.9%) Tetratricopeptide repeat (22.9%)" AIFPWQNACYPADR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" IADEVLDVNDILDKYIEQQKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.7.6.5 (75%) 3.1.7.2 (25%)" "GTP diphosphokinase (75%) guanosine-3',5'-bis(diphosphate) 3'-diphosphatase (25%)" GO:0015969 (38%) GO:0005886 (38%) "GO:0016787 (10%) GO:0008728 (6%) GO:0016301 (6%)" guanosine tetraphosphate metabolic process (38%) plasma membrane (38%) "hydrolase activity (10%) GTP diphosphokinase activity (6%) kinase activity (6%)" "IPR002912 (10%) IPR004095 (10%) IPR004811 (10%)" "ACT domain (10%) TGS (10%) RelA/SpoT family (10%)" DSVAAVDPVWNQVTTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.8.2.3 (100%) sulfide-cytochrome-c reductase (flavocytochrome c) (100%) GO:0070221 (31.3%) "GO:0070224 (31.3%) GO:0071949 (31.3%) GO:0070225 (6.3%)" sulfide oxidation, using sulfide:quinone oxidoreductase (31.3%) "sulfide:quinone oxidoreductase activity (31.3%) FAD binding (31.3%) sulfide dehydrogenase activity (6.3%)" "IPR006311 (25%) IPR015904 (25%) IPR023753 (25%)" "Twin-arginine translocation pathway, signal sequence (25%) Sulphide quinone-reductase (25%) FAD/NAD(P)-binding domain (25%)" GAALANKDAGVLSPEKCELIGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.2 (100%) fumarate hydratase (100%) "GO:0006099 (20%) GO:0006106 (20%) GO:0006108 (20%)" GO:0005737 (20%) GO:0004333 (20%) "tricarboxylic acid cycle (20%) fumarate metabolic process (20%) malate metabolic process (20%)" cytoplasm (20%) fumarate hydratase activity (20%) "IPR000362 (14.3%) IPR005677 (14.3%) IPR008948 (14.3%)" "Fumarate lyase family (14.3%) Fumarate hydratase, class II (14.3%) L-Aspartase-like (14.3%)" EIDPWAGSYYVESLTNELVHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (16.7%) IPR006099 (16.7%) IPR006158 (16.7%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-binding domain (16.7%)" LQLLTPFPAWDGNDFLNMPLLIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" VRPLSWPIDMGQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006449 (16%) GO:0005829 (17%) "GO:0003924 (17%) GO:0005525 (17%) GO:0016150 (17%)" regulation of translational termination (16%) cytosol (17%) "GTPase activity (17%) GTP binding (17%) translation release factor activity, codon nonspecific (17%)" "IPR000795 (9.2%) IPR004548 (9.2%) IPR009000 (9.2%)" "Translational (tr)-type GTP-binding domain (9.2%) Peptide chain release factor 3 (9.2%) Translation protein, beta-barrel domain superfamily (9.2%)" YTAAITGAEGK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006412 (23.9%) GO:0000028 (0.2%) GO:0002181 (0.2%)" "GO:0022627 (23.1%) GO:0005840 (2.5%) GO:1990904 (1%)" "GO:0003735 (24.1%) GO:0070181 (23.1%) GO:0019843 (1%)" "translation (23.9%) ribosomal small subunit assembly (0.2%) cytoplasmic translation (0.2%)" "cytosolic small ribosomal subunit (23.1%) ribosome (2.5%) ribonucleoprotein complex (1%)" "structural constituent of ribosome (24.1%) small ribosomal subunit rRNA binding (23.1%) rRNA binding (1%)" "IPR000529 (20.3%) IPR014717 (20.3%) IPR035980 (20.3%)" "Small ribosomal subunit protein bS6 (20.3%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (20.3%) Small ribosomal subunit protein bS6 superfamily (20.3%)" VAPDFELVKSDLSSFALK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" LAIEGGCNAVASTFGVLGAVAR Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (49.1%) "GO:0004332 (50.3%) GO:0016829 (0.6%)" glycolytic process (49.1%) "fructose-bisphosphate aldolase activity (50.3%) lyase activity (0.6%)" "IPR002915 (25.2%) IPR013785 (25.2%) IPR050456 (25.2%)" "DeoC/FbaB/LacD aldolase (25.2%) Aldolase-type TIM barrel (25.2%) DeoC/FbaB aldolase (25.2%)" QSHQEMLDHVEGLLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (25%) GO:0005737 (25%) "GO:0004828 (25%) GO:0005524 (25%)" seryl-tRNA aminoacylation (25%) cytoplasm (25%) "serine-tRNA ligase activity (25%) ATP binding (25%)" "IPR002314 (14.3%) IPR002317 (14.3%) IPR006195 (14.3%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (14.3%) Serine-tRNA ligase, type1 (14.3%) Aminoacyl-tRNA synthetase, class II (14.3%)" ALADSCTDCR root 2.7.1.2 (100%) glucokinase (100%) GO:0006096 (19.8%) "GO:0005829 (19.8%) GO:0016020 (0.2%) GO:0005737 (0.1%)" "GO:0004340 (19.8%) GO:0005524 (19.8%) GO:0005536 (19.8%)" glycolytic process (19.8%) "cytosol (19.8%) membrane (0.2%) cytoplasm (0.1%)" "glucokinase activity (19.8%) ATP binding (19.8%) D-glucose binding (19.8%)" "IPR003836 (33.3%) IPR043129 (33.3%) IPR050201 (33.3%)" "Glucokinase (33.3%) ATPase, nucleotide binding domain (33.3%) Bacterial glucokinase (33.3%)" VAEQLVDTLIEAGVRR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.2.2 (66.7%) 1.2.5.1 (33.3%)" "Deleted entry (66.7%) pyruvate dehydrogenase (quinone) (33.3%)" GO:0019752 (25%) "GO:0000287 (25%) GO:0030976 (25%) GO:0003824 (21.6%)" carboxylic acid metabolic process (25%) "magnesium ion binding (25%) thiamine pyrophosphate binding (25%) catalytic activity (21.6%)" "IPR000399 (11.1%) IPR011766 (11.1%) IPR012000 (11.1%)" "TPP-binding enzyme, conserved site (11.1%) Thiamine pyrophosphate enzyme, TPP-binding (11.1%) Thiamine pyrophosphate enzyme, central domain (11.1%)" VMVTSHLGRPTEGEYNEEFSLLPVVNYLKDK root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.6%) GO:0006094 (16.6%) GO:0008615 (0%)" "GO:0005829 (16.6%) GO:0005737 (0%)" "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "glycolytic process (16.6%) gluconeogenesis (16.6%) pyridoxine biosynthetic process (0%)" "cytosol (16.6%) cytoplasm (0%)" "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (25%) IPR015824 (25%) IPR036043 (25%)" "Phosphoglycerate kinase (25%) Phosphoglycerate kinase, N-terminal (25%) Phosphoglycerate kinase superfamily (25%)" SVADKNHIEMLDCYTGFK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.- (50%) 5.4.2.2 (50%)" "Phosphotransferases (phosphomutases) (50%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (50%)" "GO:0005975 (24%) GO:0006166 (24%)" "GO:0000287 (24%) GO:0008973 (24%) GO:0004614 (4%)" "carbohydrate metabolic process (24%) purine ribonucleoside salvage (24%)" "magnesium ion binding (24%) phosphopentomutase activity (24%) phosphoglucomutase activity (4%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" YLETAVFEPTNAEAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.77 (100%) lactaldehyde reductase (100%) "GO:0004022 (38%) GO:0046872 (38%) GO:0008912 (24.1%)" "alcohol dehydrogenase (NAD+) activity (38%) metal ion binding (38%) lactaldehyde reductase activity (24.1%)" "IPR018211 (20.2%) IPR039697 (20.2%) IPR056798 (20.2%)" "Alcohol dehydrogenase, iron-type, conserved site (20.2%) Iron-type alcohol dehydrogenase-like (20.2%) Fe-containing alcohol dehydrogenase-like, C-terminal (20.2%)" LKANEVATMQIIGDVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" LTPDKEMDNEVAFR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR032265 (100%) Protein of unknown function DUF4831 (100%) AYLDDSFTDEKIAAWDER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.-.- (100%) Acting on peptide bonds (peptidases) (100%) GO:0006508 (50%) GO:0008233 (50%) proteolysis (50%) peptidase activity (50%) "IPR001539 (40.5%) IPR051454 (40.5%) IPR036237 (19%)" "Peptidase U32 (40.5%) RNA and ubiquinone modification enzymes (40.5%) Xylose isomerase-like superfamily (19%)" VSGELLSDYYNIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" ESGRADDNEETIK Bacteria Bacteria "2.7.4.3 (96.3%) 2.7.4.- (3.7%)" "adenylate kinase (96.3%) Phosphotransferases with a phosphate group as acceptor (3.7%)" "GO:0044209 (22.6%) GO:0006139 (0.8%)" GO:0005737 (24.4%) "GO:0005524 (25.9%) GO:0004017 (25.2%) GO:0019205 (0.8%)" "AMP salvage (22.6%) nucleobase-containing compound metabolic process (0.8%)" cytoplasm (24.4%) "ATP binding (25.9%) AMP kinase activity (25.2%) nucleobase-containing compound kinase activity (0.8%)" "IPR000850 (30.8%) IPR027417 (30.8%) IPR033690 (30.8%)" "Adenylate kinase/UMP-CMP kinase (30.8%) P-loop containing nucleoside triphosphate hydrolase (30.8%) Adenylate kinase, conserved site (30.8%)" KGDMDKCIDYFDQAINLEQDPLKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" NNSLSQEVQNAQHQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0000917 (33.1%) GO:0043093 (33.1%)" "GO:0005737 (32.7%) GO:0005829 (0.4%) GO:0032153 (0.4%)" GO:0042802 (0.4%) "division septum assembly (33.1%) FtsZ-dependent cytokinesis (33.1%)" "cytoplasm (32.7%) cytosol (0.4%) cell division site (0.4%)" identical protein binding (0.4%) IPR009252 (100%) Cell division protein ZapB (100%) AHNTVAVISAGWDPGSDSVVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0000166 (25%) GO:0047850 (25%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "nucleotide binding (25%) diaminopimelate dehydrogenase activity (25%)" "IPR000683 (25%) IPR010190 (25%) IPR032094 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Diaminopimelate dehydrogenase, Ddh (25%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25%)" IIGQYTDKDAQAYFAYDSKK LLGTSAWYAPGAAGAFVVESIIHNQGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25%) GO:0006099 (25%)" "GO:0004459 (25%) GO:0030060 (25%)" "lactate metabolic process (25%) tricarboxylic acid cycle (25%)" "L-lactate dehydrogenase (NAD+) activity (25%) L-malate dehydrogenase (NAD+) activity (25%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR011275 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 3 (16.7%)" VLSVADMFAEAIRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" VADVLAFAEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) GO:0004565 (50%) carbohydrate metabolic process (50%) beta-galactosidase activity (50%) "IPR001944 (12.5%) IPR008979 (12.5%) IPR017853 (12.5%)" "Glycoside hydrolase, family 35 (12.5%) Galactose-binding-like domain superfamily (12.5%) Glycoside hydrolase superfamily (12.5%)" LTEQYLETVTK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" FVGYDLFECEAEILR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR002318 (9.1%) IPR003156 (9.1%) IPR009000 (9.1%)" "Alanine-tRNA ligase, class IIc (9.1%) DHHA1 domain (9.1%) Translation protein, beta-barrel domain superfamily (9.1%)" FQQSILLPDNVEKDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006457 (16.7%) GO:0009408 (16.7%) GO:0009651 (16.7%)" GO:0051082 (16.7%) "protein folding (16.7%) response to heat (16.7%) response to salt stress (16.7%)" unfolded protein binding (16.7%) "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" YKPDFTPHADCGDNVIIINADKVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0006412 (20%) GO:0017148 (20%)" GO:0022625 (20%) "GO:0003729 (20%) GO:0003735 (20%)" "translation (20%) negative regulation of translation (20%)" cytosolic large ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%)" "IPR005822 (25%) IPR005823 (25%) IPR023563 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13, conserved site (25%)" EKDKIYKEYHEAVDQQFDR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR007139 (100%) Protein of unknown function DUF349 (100%) FMVMVSSNGGQQHIAK Bacteria Bacteria "GO:0051301 (32.5%) GO:0017038 (32.2%) GO:0015031 (0.2%)" "GO:0042597 (32.5%) GO:0016020 (0.2%) GO:0030288 (0.2%)" "GO:0016787 (0.2%) GO:0019904 (0.2%) GO:0044877 (0.2%)" "cell division (32.5%) protein import (32.2%) protein transport (0.2%)" "periplasmic space (32.5%) membrane (0.2%) outer membrane-bounded periplasmic space (0.2%)" "hydrolase activity (0.2%) protein domain specific binding (0.2%) protein-containing complex binding (0.2%)" "IPR011042 (25.8%) IPR011659 (25.7%) IPR014167 (24.4%)" "Six-bladed beta-propeller, TolB-like (25.8%) WD40-like beta-propeller (25.7%) Tol-Pal system protein TolB (24.4%)" MKPVIAEYLGALPAVNRK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.24.55 (100%) pitrilysin (100%) GO:0006508 (33.3%) "GO:0004222 (33.3%) GO:0046872 (33.3%)" proteolysis (33.3%) "metalloendopeptidase activity (33.3%) metal ion binding (33.3%)" "IPR001431 (20%) IPR007863 (20%) IPR011249 (20%)" "Peptidase M16, zinc-binding site (20%) Peptidase M16, C-terminal (20%) Metalloenzyme, LuxS/M16 peptidase-like (20%)" QFVLEADQVIFKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR025347 (100%) Protein of unknown function DUF4251 (100%) NDTPVLDNFGTDMTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0034605 (18.9%) GO:0006508 (12.3%)" GO:0005737 (18.9%) "GO:0005524 (18.9%) GO:0016887 (18.9%) GO:0008233 (12.3%)" "cellular response to heat (18.9%) proteolysis (12.3%)" cytoplasm (18.9%) "ATP binding (18.9%) ATP hydrolysis activity (18.9%) peptidase activity (12.3%)" "IPR004176 (8.6%) IPR027417 (8.6%) IPR036628 (8.6%)" "Clp, repeat (R) N-terminal domain (8.6%) P-loop containing nucleoside triphosphate hydrolase (8.6%) Clp, N-terminal domain superfamily (8.6%)" HQAEKVGDNYDKIEQVATVSANNDPVIGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (18.2%) GO:0005737 (14.1%) "GO:0005524 (18.2%) GO:0140662 (18.2%) GO:0016853 (17.2%)" protein refolding (18.2%) cytoplasm (14.1%) "ATP binding (18.2%) ATP-dependent protein folding chaperone (18.2%) isomerase activity (17.2%)" "IPR001844 (17.3%) IPR002423 (17.3%) IPR027410 (17.3%)" "Chaperonin Cpn60/GroEL (17.3%) Chaperonin Cpn60/GroEL/TCP-1 family (17.3%) TCP-1-like chaperonin intermediate domain superfamily (17.3%)" CIDYFDQAINLEQDPLKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" LAHETEATEKQAEELWAK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (25%)" GO:0005737 (25%) GO:0004801 (25%) "carbohydrate metabolic process (25%) pentose-phosphate shunt (25%)" cytoplasm (25%) transaldolase activity (25%) "IPR001585 (25%) IPR004732 (25%) IPR013785 (25%)" "Transaldolase/Fructose-6-phosphate aldolase (25%) Transaldolase type 2 (25%) Aldolase-type TIM barrel (25%)" EHGDLKENAEYHAAR root "6.3.4.16 (50%) 6.3.5.5 (50%)" "carbamoyl-phosphate synthase (ammonia) (50%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (50%)" "GO:0032784 (20.1%) GO:0006354 (20.1%) GO:0006207 (0%)" "GO:0005737 (0%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0003677 (20.1%) GO:0070063 (20.1%) GO:0003746 (19.4%)" "regulation of DNA-templated transcription elongation (20.1%) DNA-templated transcription elongation (20.1%) 'de novo' pyrimidine nucleobase biosynthetic process (0%)" "cytoplasm (0%) cytosol (0%) plasma membrane (0%)" "DNA binding (20.1%) RNA polymerase binding (20.1%) translation elongation factor activity (19.4%)" "IPR022691 (12.5%) IPR036805 (12.5%) IPR018151 (12.5%)" "Transcription elongation factor, GreA/GreB, N-terminal (12.5%) Transcription elongation factor, GreA/GreB, N-terminal domain superfamily (12.5%) Transcription elongation factor, GreA/GreB, conserved site (12.5%)" DEGMWLLPLLK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.4.14.- (100%) Dipeptidyl-peptidases and tripeptidyl-peptidases (100%) "GO:0006508 (24.7%) GO:0043171 (24.7%)" "GO:0008239 (25.3%) GO:0070009 (25.3%)" "proteolysis (24.7%) peptide catabolic process (24.7%)" "dipeptidyl-peptidase activity (25.3%) serine-type aminopeptidase activity (25.3%)" "IPR009003 (33.9%) IPR019500 (33.9%) IPR043504 (32.3%)" "Peptidase S1, PA clan (33.9%) Peptidase S46 (33.9%) Peptidase S1, PA clan, chymotrypsin-like fold (32.3%)" KVGDVAEIQVPQGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006354 (20%) GO:0032784 (20%)" "GO:0003677 (20%) GO:0003746 (20%) GO:0070063 (20%)" "DNA-templated transcription elongation (20%) regulation of DNA-templated transcription elongation (20%)" "DNA binding (20%) translation elongation factor activity (20%) RNA polymerase binding (20%)" "IPR001437 (12.5%) IPR006359 (12.5%) IPR018151 (12.5%)" "Transcription elongation factor, GreA/GreB, C-terminal (12.5%) Transcription elongation factor GreA (12.5%) Transcription elongation factor, GreA/GreB, conserved site (12.5%)" GATVELADGVEGYLR root "GO:0006412 (24.7%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.4%) GO:0005840 (0.8%) GO:1990904 (0.3%)" "GO:0003729 (24.7%) GO:0003735 (24.7%) GO:0016491 (0.1%)" "translation (24.7%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.4%) ribosome (0.8%) ribonucleoprotein complex (0.3%)" "mRNA binding (24.7%) structural constituent of ribosome (24.7%) oxidoreductase activity (0.1%)" "IPR003029 (20.2%) IPR012340 (20.2%) IPR050437 (20.2%)" "S1 domain (20.2%) Nucleic acid-binding, OB-fold (20.2%) Small ribosomal subunit protein bS1-like (20.2%)" FNALYGEIFKVPEPFIPK root "6.1.1.2 (98.9%) 3.1.3.18 (1.1%)" "tryptophan--tRNA ligase (98.9%) phosphoglycolate phosphatase (1.1%)" "GO:0006436 (24.5%) GO:0005975 (0.3%) GO:0046295 (0.3%)" "GO:0005829 (24.5%) GO:0005739 (0.3%)" "GO:0004830 (24.5%) GO:0005524 (24.5%) GO:0016874 (0.6%)" "tryptophanyl-tRNA aminoacylation (24.5%) carbohydrate metabolic process (0.3%) glycolate biosynthetic process (0.3%)" "cytosol (24.5%) mitochondrion (0.3%)" "tryptophan-tRNA ligase activity (24.5%) ATP binding (24.5%) ligase activity (0.6%)" "IPR002305 (17.3%) IPR002306 (17.3%) IPR014729 (17.3%)" "Aminoacyl-tRNA synthetase, class Ic (17.3%) Tryptophan-tRNA ligase (17.3%) Rossmann-like alpha/beta/alpha sandwich fold (17.3%)" CKEFTTPEGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0046872 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) metal ion binding (9.1%)" "IPR000023 (16.8%) IPR022953 (16.8%) IPR035966 (16.8%)" "Phosphofructokinase domain (16.8%) ATP-dependent 6-phosphofructokinase (16.8%) Phosphofructokinase superfamily (16.8%)" HLKDDDSIEIINIHGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006355 (19.8%) GO:0000160 (0.9%)" "GO:0005829 (19.8%) GO:0032993 (19.8%)" "GO:0000156 (19.8%) GO:0000976 (19.8%)" "regulation of DNA-templated transcription (19.8%) phosphorelay signal transduction system (0.9%)" "cytosol (19.8%) protein-DNA complex (19.8%)" "phosphorelay response regulator activity (19.8%) transcription cis-regulatory region binding (19.8%)" "IPR001789 (16.9%) IPR001867 (16.9%) IPR011006 (16.9%)" "Signal transduction response regulator, receiver domain (16.9%) OmpR/PhoB-type DNA-binding domain (16.9%) CheY-like superfamily (16.9%)" IVIFEQLNETPQTEVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) GO:0004565 (50%) carbohydrate metabolic process (50%) beta-galactosidase activity (50%) "IPR001944 (12.5%) IPR008979 (12.5%) IPR017853 (12.5%)" "Glycoside hydrolase, family 35 (12.5%) Galactose-binding-like domain superfamily (12.5%) Glycoside hydrolase superfamily (12.5%)" VLVSQPKPASEKSPYYDIAEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.75 (100%) uroporphyrinogen-III synthase (100%) "GO:0006780 (31.9%) GO:0032259 (1.4%) GO:0033014 (0.5%)" GO:0005829 (31.9%) "GO:0004852 (32.4%) GO:0008168 (1.4%) GO:0016829 (0.5%)" "uroporphyrinogen III biosynthetic process (31.9%) methylation (1.4%) tetrapyrrole biosynthetic process (0.5%)" cytosol (31.9%) "uroporphyrinogen-III synthase activity (32.4%) methyltransferase activity (1.4%) lyase activity (0.5%)" "IPR003754 (33.5%) IPR036108 (33.5%) IPR039793 (33%)" "Tetrapyrrole biosynthesis, uroporphyrinogen III synthase (33.5%) Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily (33.5%) Uroporphyrinogen-III synthase (33%)" TGDEVNPEKASSASQFYIVTGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR002130 (25.3%) IPR020892 (25.3%) IPR044666 (25.3%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (25.3%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (25.3%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like (25.3%)" AGSIINMSSVVGVHGNAGQANYSASK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) GO:0006633 (33.3%) "GO:0004316 (33.3%) GO:0051287 (33.3%)" fatty acid biosynthetic process (33.3%) "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33.3%) NAD binding (33.3%)" "IPR002347 (16.7%) IPR011284 (16.7%) IPR020904 (16.7%)" "Short-chain dehydrogenase/reductase SDR (16.7%) 3-oxoacyl-(acyl-carrier-protein) reductase (16.7%) Short-chain dehydrogenase/reductase, conserved site (16.7%)" DGVITIEEAKGTDTTIGVVEGMQFDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (19.3%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (11.9%) GO:1990220 (0.1%)" "GO:0005524 (19.3%) GO:0140662 (19.3%) GO:0016853 (17.8%)" "protein refolding (19.3%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (11.9%) GroEL-GroES complex (0.1%)" "ATP binding (19.3%) ATP-dependent protein folding chaperone (19.3%) isomerase activity (17.8%)" "IPR001844 (17.7%) IPR002423 (17.7%) IPR027409 (17.6%)" "Chaperonin Cpn60/GroEL (17.7%) Chaperonin Cpn60/GroEL/TCP-1 family (17.7%) GroEL-like apical domain superfamily (17.6%)" GMLKGQESEVTGVK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0032790 (16.8%) GO:0006414 (0%)" "GO:0005737 (15.9%) GO:0005829 (0.1%)" "GO:0003746 (17.2%) GO:0005525 (16.8%) GO:0003924 (16.2%)" "ribosome disassembly (16.8%) translational elongation (0%)" "cytoplasm (15.9%) cytosol (0.1%)" "translation elongation factor activity (17.2%) GTP binding (16.8%) GTPase activity (16.2%)" "IPR000640 (6.4%) IPR035647 (6.4%) IPR035649 (6.4%)" "Elongation factor EFG, domain V-like (6.4%) EF-G domain III/V-like (6.4%) EFG, domain V (6.4%)" KYRDPDYSAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0003700 (50%) GO:0043565 (50%)" "DNA-binding transcription factor activity (50%) sequence-specific DNA binding (50%)" "IPR009057 (50%) IPR018060 (50%)" "Homedomain-like superfamily (50%) AraC-like, DNA binding HTH domain (50%)" RKVNPNDTNVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (23%) GO:0009263 (7.2%)" "GO:0004748 (23%) GO:0031419 (23%) GO:0000166 (15.8%)" "DNA biosynthetic process (23%) deoxyribonucleotide biosynthetic process (7.2%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (23%) cobalamin binding (23%) nucleotide binding (15.8%)" "IPR000788 (30.3%) IPR013344 (30.3%) IPR050862 (30.3%)" "Ribonucleotide reductase large subunit, C-terminal (30.3%) Ribonucleotide reductase, adenosylcobalamin-dependent (30.3%) Ribonucleoside diphosphate reductase class-2 (30.3%)" ISEEQLFYCQQR Pseudomonadati Bacteria Pseudomonadati GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR010231 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufB (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" QILLARPIVALSNK Pseudomonadati Bacteria Pseudomonadati GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (24.1%) IPR003714 (24.1%) IPR027417 (24.1%)" "PIN domain (24.1%) PhoH-like protein (24.1%) P-loop containing nucleoside triphosphate hydrolase (24.1%)" MDLFDVISNDIKEAMK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0016884 (95.2%) GO:0016740 (4.8%)" "carbon-nitrogen ligase activity, with glutamine as amido-N-donor (95.2%) transferase activity (4.8%)" "IPR003789 (25%) IPR019004 (25%) IPR023168 (25%)" "Aspartyl/glutamyl-tRNA amidotransferase subunit B-like (25%) Uncharacterised protein YqeY/Aim41 (25%) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 (25%)" IAELAGFSVPENTK root "1.1.1.1 (68.8%) 1.2.1.10 (31.3%)" "alcohol dehydrogenase (68.8%) acetaldehyde dehydrogenase (acetylating) (31.3%)" "GO:0015976 (18%) GO:0006066 (17.8%) GO:0006115 (0.2%)" "GO:0005829 (0.2%) GO:0016020 (0.2%)" "GO:0046872 (19.7%) GO:0008774 (19%) GO:0004022 (15.5%)" "carbon utilization (18%) alcohol metabolic process (17.8%) ethanol biosynthetic process (0.2%)" "cytosol (0.2%) membrane (0.2%)" "metal ion binding (19.7%) acetaldehyde dehydrogenase (acetylating) activity (19%) alcohol dehydrogenase (NAD+) activity (15.5%)" "IPR016163 (10.6%) IPR016161 (10.5%) IPR001670 (10.1%)" "Aldehyde dehydrogenase, C-terminal (10.6%) Aldehyde/histidinol dehydrogenase (10.5%) Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (10.1%)" VGDEIEAVILTLDRDER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (23.9%) "GO:0022627 (22%) GO:0005737 (1.8%) GO:0005840 (1.8%)" "GO:0003729 (23.9%) GO:0003735 (23.9%) GO:0004654 (0.9%)" translation (23.9%) "cytosolic small ribosomal subunit (22%) cytoplasm (1.8%) ribosome (1.8%)" "mRNA binding (23.9%) structural constituent of ribosome (23.9%) polyribonucleotide nucleotidyltransferase activity (0.9%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" AAVETKSPVILQVSK Bacteria Bacteria "4.1.2.13 (98.7%) 4.1.2.- (1.3%)" "fructose-bisphosphate aldolase (98.7%) Aldehyde-lyases (1.3%)" "GO:0006096 (24.1%) GO:0030388 (24.1%) GO:0005975 (1.1%)" GO:0016020 (0.2%) "GO:0008270 (25.2%) GO:0004332 (24.2%) GO:0016832 (1%)" "glycolytic process (24.1%) fructose 1,6-bisphosphate metabolic process (24.1%) carbohydrate metabolic process (1.1%)" membrane (0.2%) "zinc ion binding (25.2%) fructose-bisphosphate aldolase activity (24.2%) aldehyde-lyase activity (1%)" "IPR000771 (25.3%) IPR013785 (25.3%) IPR050246 (25.2%)" "Fructose-bisphosphate aldolase, class-II (25.3%) Aldolase-type TIM barrel (25.3%) Class II Fructose-bisphosphate Aldolase (25.2%)" GDWQNEVNVRDFIQK root 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (29.9%) GO:0005975 (0.1%) GO:0044814 (0%)" "GO:0005829 (31.9%) GO:0005737 (0.1%) GO:0005886 (0%)" "GO:0008861 (32.2%) GO:0016829 (5%) GO:0016746 (0.4%)" "glucose metabolic process (29.9%) carbohydrate metabolic process (0.1%) pyruvate fermentation via PFL (0%)" "cytosol (31.9%) cytoplasm (0.1%) plasma membrane (0%)" "formate C-acetyltransferase activity (32.2%) lyase activity (5%) acyltransferase activity (0.4%)" "IPR050244 (20.9%) IPR004184 (20.5%) IPR005949 (19.5%)" "Autonomous Glycyl Radical Cofactor (20.9%) Pyruvate formate lyase domain (20.5%) Formate acetyltransferase (19.5%)" VGTQDIFALPLEEYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales INYFDDVELIAEQAKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (25%) GO:0005829 (25%) "GO:0004830 (25%) GO:0005524 (25%)" tryptophanyl-tRNA aminoacylation (25%) cytosol (25%) "tryptophan-tRNA ligase activity (25%) ATP binding (25%)" "IPR001412 (20%) IPR002305 (20%) IPR002306 (20%)" "Aminoacyl-tRNA synthetase, class I, conserved site (20%) Aminoacyl-tRNA synthetase, class Ic (20%) Tryptophan-tRNA ligase (20%)" VDAEVAAYDQKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001854 (50%) IPR036049 (50%)" "Large ribosomal subunit protein uL29 (50%) Large ribosomal subunit protein uL29 superfamily (50%)" TALAIDAIINQR root "7.1.2.2 (96.4%) 3.6.3.14 (3.5%) 3.6.3.- (0.1%)" "H(+)-transporting two-sector ATPase (96.4%) Transferred entry: 7.1.2.2 (3.5%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (0.1%)" "GO:0015986 (0.1%) GO:0042777 (0%)" "GO:0045259 (19%) GO:0005886 (18.5%) GO:0005743 (0.1%)" "GO:0005524 (19%) GO:0046933 (19%) GO:0043531 (18.9%)" "proton motive force-driven ATP synthesis (0.1%) proton motive force-driven plasma membrane ATP synthesis (0%)" "proton-transporting ATP synthase complex (19%) plasma membrane (18.5%) mitochondrial inner membrane (0.1%)" "ATP binding (19%) proton-transporting ATP synthase activity, rotational mechanism (19%) ADP binding (18.9%)" "IPR000194 (10.1%) IPR005294 (10.1%) IPR027417 (10.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%) ATP synthase, F1 complex, alpha subunit (10.1%) P-loop containing nucleoside triphosphate hydrolase (10.1%)" VLPDATINTESPAWAIDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR025350 (100%) Protein of unknown function DUF4254 (100%) AETAEKYGDEQVK root "5.4.2.11 (99.5%) 5.4.2.- (0.3%) 5.4.2.1 (0.1%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (99.5%) Phosphotransferases (phosphomutases) (0.3%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.1%)" "GO:0006096 (33.1%) GO:0006094 (33%) GO:0061621 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004619 (32.8%) GO:0016868 (0.4%) GO:0016853 (0.3%)" "glycolytic process (33.1%) gluconeogenesis (33%) canonical glycolysis (0%)" "cytoplasm (0%) cytosol (0%)" "phosphoglycerate mutase activity (32.8%) intramolecular phosphotransferase activity (0.4%) isomerase activity (0.3%)" "IPR005952 (25.2%) IPR013078 (25.1%) IPR029033 (25.1%)" "Phosphoglycerate mutase 1 (25.2%) Histidine phosphatase superfamily, clade-1 (25.1%) Histidine phosphatase superfamily (25.1%)" VVVETPVGLNEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.8.4.- (100%) With a disulfide as acceptor (100%) "GO:0006260 (13.1%) GO:0042026 (13.1%) GO:0009408 (10%)" "GO:0005737 (13.1%) GO:0016020 (0.1%)" "GO:0051082 (13.1%) GO:0008270 (13.1%) GO:0031072 (12%)" "DNA replication (13.1%) protein refolding (13.1%) response to heat (10%)" "cytoplasm (13.1%) membrane (0.1%)" "unfolded protein binding (13.1%) zinc ion binding (13.1%) heat shock protein binding (12%)" "IPR002939 (14.6%) IPR008971 (14.6%) IPR001305 (13.4%)" "Chaperone DnaJ, C-terminal (14.6%) HSP40/DnaJ peptide-binding (14.6%) Heat shock protein DnaJ, cysteine-rich domain (13.4%)" AISEQVKQEIAAEVAEIVAHGGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.5.1.5 (50%) 3.5.4.9 (50%)" "methylenetetrahydrofolate dehydrogenase (NADP(+)) (50%) methenyltetrahydrofolate cyclohydrolase (50%)" "GO:0000105 (14.3%) GO:0006164 (14.3%) GO:0009086 (14.3%)" GO:0005829 (14.3%) "GO:0004477 (14.3%) GO:0004488 (14.3%)" "L-histidine biosynthetic process (14.3%) purine nucleotide biosynthetic process (14.3%) methionine biosynthetic process (14.3%)" cytosol (14.3%) "methenyltetrahydrofolate cyclohydrolase activity (14.3%) methylenetetrahydrofolate dehydrogenase (NADP+) activity (14.3%)" "IPR000672 (16.7%) IPR020630 (16.7%) IPR020631 (16.7%)" "Tetrahydrofolate dehydrogenase/cyclohydrolase (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (16.7%)" IAHDISSYSFVAMAK root 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) "GO:0006633 (34.7%) GO:0009102 (29.1%) GO:0030497 (0.2%)" "GO:0005829 (0.1%) GO:0016020 (0.1%) GO:0032991 (0.1%)" "GO:0004318 (34.9%) GO:0016491 (0.3%) GO:0042802 (0.2%)" "fatty acid biosynthetic process (34.7%) biotin biosynthetic process (29.1%) fatty acid elongation (0.2%)" "cytosol (0.1%) membrane (0.1%) protein-containing complex (0.1%)" "enoyl-[acyl-carrier-protein] reductase (NADH) activity (34.9%) oxidoreductase activity (0.3%) identical protein binding (0.2%)" "IPR002347 (33.4%) IPR014358 (33.4%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.4%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.4%) NAD(P)-binding domain superfamily (33.3%)" AGDMVIDGSVR root 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0015986 (0.1%) GO:0042777 (0%)" "GO:0005886 (30.5%) GO:0045259 (30.5%) GO:0016020 (0.2%)" "GO:0046933 (30.8%) GO:0016787 (7.7%) GO:0046961 (0%)" "proton motive force-driven ATP synthesis (0.1%) proton motive force-driven plasma membrane ATP synthesis (0%)" "plasma membrane (30.5%) proton-transporting ATP synthase complex (30.5%) membrane (0.2%)" "proton-transporting ATP synthase activity, rotational mechanism (30.8%) hydrolase activity (7.7%) proton-transporting ATPase activity, rotational mechanism (0%)" "IPR000711 (33.6%) IPR026015 (33.4%) IPR020781 (32.9%)" "ATPase, OSCP/delta subunit (33.6%) F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily (33.4%) ATPase, OSCP/delta subunit, conserved site (32.9%)" DLVQALYDIKPGVFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.55 (100%) non-reducing end alpha-L-arabinofuranosidase (100%) GO:0046373 (49.2%) GO:0046556 (50.8%) L-arabinose metabolic process (49.2%) alpha-L-arabinofuranosidase activity (50.8%) "IPR003305 (14.7%) IPR051563 (14.7%) IPR008979 (14.2%)" "Carbohydrate-binding, CenC-like (14.7%) Glycosyl Hydrolase Family 51 (14.7%) Galactose-binding-like domain superfamily (14.2%)" SLLTSTLHSYFAGKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0110001 (6.7%) "GO:0005524 (80%) GO:0004540 (6.7%) GO:0016787 (6.7%)" toxin-antitoxin complex (6.7%) "ATP binding (80%) RNA nuclease activity (6.7%) hydrolase activity (6.7%)" "IPR018631 (34.1%) IPR027417 (33%) IPR012547 (31.8%)" "AAA-ATPase-like domain (34.1%) P-loop containing nucleoside triphosphate hydrolase (33%) PD-(D/E)XK nuclease superfamily 9 (31.8%)" GLGDTAQDMIVYGDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011044 (17.8%) IPR015943 (17.8%) IPR031815 (17.8%)" "Quinoprotein amine dehydrogenase, beta chain-like (17.8%) WD40/YVTN repeat-like-containing domain superfamily (17.8%) Protein of unknown function DUF5074 (17.8%)" YVLTANAPETKDNDFTWKDFQAR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0004825 (16.7%) GO:0005524 (16.7%) GO:0000049 (16.6%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "methionine-tRNA ligase activity (16.7%) ATP binding (16.7%) tRNA binding (16.6%)" "IPR015413 (8.4%) IPR023458 (8.4%) IPR014729 (8.4%)" "Methionyl/Leucyl tRNA synthetase (8.4%) Methionine-tRNA ligase, type 1 (8.4%) Rossmann-like alpha/beta/alpha sandwich fold (8.4%)" SAEIKELLAEIAELSDKVTFKEDNSLPVR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.8.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0000302 (14.1%) GO:0006979 (0.1%) GO:0042744 (0.1%)" "GO:0005829 (13.9%) GO:0032991 (13.8%) GO:0009321 (0.1%)" "GO:0051287 (14.1%) GO:0102039 (14.1%) GO:0016668 (14%)" "response to reactive oxygen species (14.1%) response to oxidative stress (0.1%) hydrogen peroxide catabolic process (0.1%)" "cytosol (13.9%) protein-containing complex (13.8%) alkyl hydroperoxide reductase complex (0.1%)" "NAD binding (14.1%) NADH-dependent peroxiredoxin activity (14.1%) oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (14%)" "IPR036249 (11.5%) IPR044142 (11.5%) IPR012336 (11.3%)" "Thioredoxin-like superfamily (11.5%) AhpF, N-terminal domain, N-terminal TRX-fold subdomain (11.5%) Thioredoxin-like fold (11.3%)" ETTEDKLDAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" GYNPINQIVGYLLSGDPAYIPR Bacteria Bacteria 3.1.-.- (100%) Acting on ester bonds (100%) "GO:0016787 (80%) GO:0004812 (20%)" "hydrolase activity (80%) aminoacyl-tRNA ligase activity (20%)" IPR009309 (100%) IreB regulatory phosphoprotein (100%) LWDVLVDPAR root "2.4.99.17 (99.8%) 5.-.-.- (0.2%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase (99.8%) Isomerases (0.2%)" "GO:0002099 (33.2%) GO:0008616 (0.2%)" "GO:0005737 (33.2%) GO:0016020 (0.1%)" "GO:0051075 (33.2%) GO:0016853 (0%) GO:0016740 (0%)" "tRNA wobble guanine modification (33.2%) tRNA queuosine(34) biosynthetic process (0.2%)" "cytoplasm (33.2%) membrane (0.1%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity (33.2%) isomerase activity (0%) transferase activity (0%)" "IPR003699 (25.1%) IPR036100 (25%) IPR042118 (25%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA (25.1%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily (25%) QueA, domain 1 (25%)" MEAEAGACEDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (48.5%) GO:0004601 (24.2%) GO:0016491 (22.7%)" "iron ion binding (48.5%) peroxidase activity (24.2%) oxidoreductase activity (22.7%)" "IPR003251 (12.7%) IPR009078 (12.7%) IPR012347 (12.7%)" "Rubrerythrin, diiron-binding domain (12.7%) Ferritin-like superfamily (12.7%) Ferritin-like (12.7%)" NVAVVGCSVDSQFSHFAWLNQDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" LIAEAMDKVGK root "5.6.1.7 (100%) 3.6.4.9 (0%)" "chaperonin ATPase (100%) Transferred entry: 5.6.1.7 (0%)" "GO:0042026 (14.4%) GO:0009408 (7.1%) GO:0051085 (0%)" "GO:0005737 (12%) GO:0009986 (6.9%) GO:0042603 (6.9%)" "GO:0140662 (14.4%) GO:0005524 (14.4%) GO:0016853 (12.2%)" "protein refolding (14.4%) response to heat (7.1%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (12%) cell surface (6.9%) capsule (6.9%)" "ATP-dependent protein folding chaperone (14.4%) ATP binding (14.4%) isomerase activity (12.2%)" "IPR001844 (17.5%) IPR002423 (17.4%) IPR027413 (17.4%)" "Chaperonin Cpn60/GroEL (17.5%) Chaperonin Cpn60/GroEL/TCP-1 family (17.4%) GroEL-like equatorial domain superfamily (17.4%)" FTVLISPHVNKDAR root "GO:0006412 (19.9%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0005840 (20.1%) GO:1990904 (19.8%) GO:0015935 (0.1%)" "GO:0003735 (19.9%) GO:0000049 (19.7%) GO:0003723 (0.2%)" "translation (19.9%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (20.1%) ribonucleoprotein complex (19.8%) small ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) tRNA binding (19.7%) RNA binding (0.2%)" "IPR001848 (25.1%) IPR027486 (25.1%) IPR036838 (25.1%)" "Small ribosomal subunit protein uS10 (25.1%) Small ribosomal subunit protein uS10 domain (25.1%) Small ribosomal subunit protein uS10 domain superfamily (25.1%)" KLEGEIGAEQLR Candidatus Borkfalkia excrementigallinarum Bacteria Bacillati Bacillota Clostridia Christensenellales Christensenellaceae Candidatus Borkfalkia Candidatus Borkfalkia excrementigallinarum "GO:0000150 (50%) GO:0003677 (50%)" "DNA strand exchange activity (50%) DNA binding (50%)" "IPR006119 (16.7%) IPR011109 (16.7%) IPR025827 (16.7%)" "Resolvase, N-terminal catalytic domain (16.7%) DNA-binding recombinase domain (16.7%) Recombinase zinc beta ribbon domain (16.7%)" FHQDICGINKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.5%) GO:0005829 (16.5%) "GO:0000049 (16.5%) GO:0000287 (16.5%) GO:0004824 (16.5%)" lysyl-tRNA aminoacylation (16.5%) cytosol (16.5%) "tRNA binding (16.5%) magnesium ion binding (16.5%) lysine-tRNA ligase activity (16.5%)" "IPR002313 (11.1%) IPR004364 (11.1%) IPR004365 (11.1%)" "Lysine-tRNA ligase, class II (11.1%) Aminoacyl-tRNA synthetase, class II (D/K/N) (11.1%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.1%)" LQEVAAATMVGGATLTK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25%) GO:0006099 (25%)" "GO:0004459 (25%) GO:0030060 (25%)" "lactate metabolic process (25%) tricarboxylic acid cycle (25%)" "L-lactate dehydrogenase (NAD+) activity (25%) L-malate dehydrogenase (NAD+) activity (25%)" "IPR001236 (17.5%) IPR011275 (17.5%) IPR022383 (17.5%)" "Lactate/malate dehydrogenase, N-terminal (17.5%) Malate dehydrogenase, type 3 (17.5%) Lactate/malate dehydrogenase, C-terminal (17.5%)" LMNLPAPNPEAPR root "2.1.3.15 (87.9%) 6.4.1.2 (12.1%)" "acetyl-CoA carboxytransferase (87.9%) acetyl-CoA carboxylase (12.1%)" "GO:0006633 (14.5%) GO:2001295 (14.5%) GO:0017148 (0.1%)" "GO:0009329 (14.5%) GO:0005829 (0.1%) GO:0009317 (0.1%)" "GO:0003989 (14.7%) GO:0005524 (13.1%) GO:0008270 (12.8%)" "fatty acid biosynthetic process (14.5%) malonyl-CoA biosynthetic process (14.5%) negative regulation of translation (0.1%)" "acetate CoA-transferase complex (14.5%) cytosol (0.1%) acetyl-CoA carboxylase complex (0.1%)" "acetyl-CoA carboxylase activity (14.7%) ATP binding (13.1%) zinc ion binding (12.8%)" "IPR011762 (20.9%) IPR000438 (20.4%) IPR029045 (20.4%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20.9%) Acetyl-CoA carboxylase carboxyl transferase, beta subunit (20.4%) ClpP/crotonase-like domain superfamily (20.4%)" TCLVTDALSCAANEGKPLSDPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (33.3%) "GO:0008448 (33.3%) GO:0046872 (33.3%)" N-acetylglucosamine catabolic process (33.3%) "N-acetylglucosamine-6-phosphate deacetylase activity (33.3%) metal ion binding (33.3%)" "IPR003764 (25%) IPR006680 (25%) IPR011059 (25%)" "N-acetylglucosamine-6-phosphate deacetylase (25%) Amidohydrolase-related (25%) Metal-dependent hydrolase, composite domain superfamily (25%)" TPPVAIQLLEATKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (14.3%) IPR006519 (14.3%) IPR020783 (14.3%)" "Ribosomal protein uL11 (14.3%) Large ribosomal subunit protein uL11, bacteria (14.3%) Large ribosomal subunit protein uL11, C-terminal (14.3%)" LGDNAHAESTVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.2.1.3 (100%) long-chain-fatty-acid--CoA ligase (100%) GO:0016020 (50%) GO:0004467 (50%) membrane (50%) long-chain fatty acid-CoA ligase activity (50%) "IPR000873 (33.3%) IPR020845 (33.3%) IPR042099 (33.3%)" "AMP-dependent synthetase/ligase domain (33.3%) AMP-binding, conserved site (33.3%) ANL, N-terminal domain (33.3%)" SLIPLDKEAIFASVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (26.3%) GO:0003863 (7%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (26.3%) branched-chain 2-oxo acid dehydrogenase activity (7%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" DGYKFEEVAAAIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0000166 (25%) GO:0047850 (25%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "nucleotide binding (25%) diaminopimelate dehydrogenase activity (25%)" "IPR000683 (25%) IPR010190 (25%) IPR032094 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Diaminopimelate dehydrogenase, Ddh (25%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25%)" PYVVAQPCVDVKDKACVDECPVDCIYEGSR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium "GO:0009055 (23.8%) GO:0046872 (23.8%) GO:0051538 (23.8%)" "electron transfer activity (23.8%) metal ion binding (23.8%) 3 iron, 4 sulfur cluster binding (23.8%)" "IPR000813 (20%) IPR017896 (20%) IPR017900 (20%)" "7Fe ferredoxin (20%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (20%) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (20%)" MMQSEKDKLLHLEEELHQR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0034605 (18.5%) GO:0042026 (18.5%) GO:0006508 (2.5%)" GO:0005737 (18.5%) "GO:0005524 (18.5%) GO:0016887 (18.5%) GO:0003723 (2.5%)" "cellular response to heat (18.5%) protein refolding (18.5%) proteolysis (2.5%)" cytoplasm (18.5%) "ATP binding (18.5%) ATP hydrolysis activity (18.5%) RNA binding (2.5%)" "IPR001270 (8.2%) IPR003593 (8.2%) IPR003959 (8.2%)" "ClpA/B family (8.2%) AAA+ ATPase domain (8.2%) ATPase, AAA-type, core (8.2%)" YFCVDFLHVKPGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043043 (32.2%) "GO:0005829 (30.5%) GO:0005737 (3.4%)" GO:0003746 (33.9%) peptide biosynthetic process (32.2%) "cytosol (30.5%) cytoplasm (3.4%)" translation elongation factor activity (33.9%) "IPR008991 (11.4%) IPR013185 (11.4%) IPR014722 (11.4%)" "Translation protein SH3-like domain superfamily (11.4%) Translation elongation factor, KOW-like (11.4%) Large ribosomal subunit protein uL2, domain 2 (11.4%)" LVGAPPGYVGYDEGGQLTEAIR root "GO:0034605 (19.5%) GO:0042026 (17.8%) GO:0006508 (2.1%)" GO:0005737 (19.5%) "GO:0005524 (19.5%) GO:0016887 (19.5%) GO:0008233 (2.1%)" "cellular response to heat (19.5%) protein refolding (17.8%) proteolysis (2.1%)" cytoplasm (19.5%) "ATP binding (19.5%) ATP hydrolysis activity (19.5%) peptidase activity (2.1%)" "IPR001270 (8.5%) IPR003959 (8.5%) IPR027417 (8.5%)" "ClpA/B family (8.5%) ATPase, AAA-type, core (8.5%) P-loop containing nucleoside triphosphate hydrolase (8.5%)" NAEQSFAFEILNDPDIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" EKIEPVMHIIDIAFK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.11.4 (100%) tripeptide aminopeptidase (100%) "GO:0006508 (16.7%) GO:0043171 (15.7%) GO:0006518 (0.9%)" GO:0005829 (16.7%) "GO:0008237 (16.7%) GO:0008270 (16.7%) GO:0045148 (16.7%)" "proteolysis (16.7%) peptide catabolic process (15.7%) peptide metabolic process (0.9%)" cytosol (16.7%) "metallopeptidase activity (16.7%) zinc ion binding (16.7%) tripeptide aminopeptidase activity (16.7%)" "IPR001261 (20%) IPR002933 (20%) IPR010161 (20%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%) Peptidase M20 (20%) Peptidase M20B, tripeptide aminopeptidase (20%)" TNELKADEER Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.6%) GO:0051301 (12.5%) GO:0043335 (12%)" "GO:0005737 (12.4%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003755 (12.6%) GO:0043022 (12%) GO:0044183 (12%)" "protein transport (12.6%) cell division (12.5%) protein unfolding (12%)" "cytoplasm (12.4%) cytosol (0%) membrane (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.6%) ribosome binding (12%) protein folding chaperone (12%)" "IPR008880 (12.7%) IPR027304 (12.7%) IPR037041 (12.7%)" "Trigger factor, C-terminal (12.7%) Trigger factor/SurA domain superfamily (12.7%) Trigger factor, C-terminal domain superfamily (12.7%)" EAQEATVIDSKPENFIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR023393 (50%) IPR045736 (50%)" "START-like domain superfamily (50%) START-like domain (50%)" TGGEGALKNLLPIIDDFER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006457 (16.7%) GO:0005737 (16.7%) "GO:0000774 (16.7%) GO:0042803 (16.7%) GO:0051082 (16.7%)" protein folding (16.7%) cytoplasm (16.7%) "adenyl-nucleotide exchange factor activity (16.7%) protein homodimerization activity (16.7%) unfolded protein binding (16.7%)" "IPR000740 (33.3%) IPR009012 (33.3%) IPR013805 (33.3%)" "GrpE nucleotide exchange factor (33.3%) GrpE nucleotide exchange factor, head (33.3%) GrpE nucleotide exchange factor, coiled-coil (33.3%)" YSGVKDDHVHFLDLPFYETGLVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.5%) GO:0006044 (32.5%)" "GO:0004342 (32.5%) GO:0016853 (2.5%)" "carbohydrate metabolic process (32.5%) N-acetylglucosamine metabolic process (32.5%)" "glucosamine-6-phosphate deaminase activity (32.5%) isomerase activity (2.5%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" IHPGTNVGKGGDDTLFALVDGAVK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001684 (50%) IPR018261 (50%)" "Large ribosomal subunit protein bL27 (50%) Large ribosomal subunit protein bL27, conserved site (50%)" VKLSEPQGDELPSAGFVAGNQGYQAPGGEKNEIR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" TKCFEAMNDDLNTPIVISHLFDGAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.16 (100%) cysteine--tRNA ligase (100%) GO:0006423 (20%) GO:0005829 (20%) "GO:0004817 (20%) GO:0005524 (20%) GO:0008270 (20%)" cysteinyl-tRNA aminoacylation (20%) cytosol (20%) "cysteine-tRNA ligase activity (20%) ATP binding (20%) zinc ion binding (20%)" "IPR009080 (14.3%) IPR014729 (14.3%) IPR015273 (14.3%)" "Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (14.3%) Rossmann-like alpha/beta/alpha sandwich fold (14.3%) Cysteinyl-tRNA synthetase, class Ia, DALR (14.3%)" FDDNACVLLNAGGDIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000218 (25%) IPR005745 (25%) IPR019972 (25%)" "Large ribosomal subunit protein uL14 (25%) Large ribosomal subunit protein uL14, bacteria (25%) Large ribosomal subunit protein uL14, conserved site (25%)" GGGISGQAGAIR root "GO:0006412 (24.2%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (21%) GO:0015935 (3.1%) GO:0005737 (3.1%)" "GO:0003735 (24.2%) GO:0003723 (24.1%) GO:0000049 (0%)" "translation (24.2%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (21%) small ribosomal subunit (3.1%) cytoplasm (3.1%)" "structural constituent of ribosome (24.2%) RNA binding (24.1%) tRNA binding (0%)" "IPR000754 (20.1%) IPR014721 (20.1%) IPR020568 (20.1%)" "Small ribosomal subunit protein uS9 (20.1%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (20.1%) Ribosomal protein uS5 domain 2-type superfamily (20.1%)" GSQQIKDGEEVIGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006281 (12.8%) GO:0006310 (12.8%) GO:0009432 (11.3%)" GO:0005829 (12.8%) "GO:0003697 (12.8%) GO:0005524 (12.8%) GO:0140664 (12.8%)" "DNA repair (12.8%) DNA recombination (12.8%) SOS response (11.3%)" cytosol (12.8%) "single-stranded DNA binding (12.8%) ATP binding (12.8%) ATP-dependent DNA damage sensor activity (12.8%)" "IPR013765 (11.6%) IPR020584 (11.6%) IPR020587 (11.6%)" "DNA recombination and repair protein RecA (11.6%) DNA recombination/repair protein RecA, conserved site (11.6%) DNA recombination and repair protein RecA, monomer-monomer interface (11.6%)" YAMIGDPTGALTR root "1.11.1.26 (98.4%) 1.11.1.15 (1.1%) 1.-.-.- (0.2%)" "NADH-dependent peroxiredoxin (98.4%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (1.1%) Oxidoreductases (0.2%)" "GO:0006979 (14.7%) GO:0042744 (14.7%) GO:0045454 (14.7%)" "GO:0005829 (14.7%) GO:0016020 (0.1%) GO:0005737 (0%)" "GO:0008379 (14.7%) GO:0102039 (11.7%) GO:0004601 (0.1%)" "response to oxidative stress (14.7%) hydrogen peroxide catabolic process (14.7%) cell redox homeostasis (14.7%)" "cytosol (14.7%) membrane (0.1%) cytoplasm (0%)" "thioredoxin peroxidase activity (14.7%) NADH-dependent peroxiredoxin activity (11.7%) peroxidase activity (0.1%)" "IPR000866 (14.4%) IPR036249 (14.4%) IPR050217 (14.4%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (14.4%) Thioredoxin-like superfamily (14.4%) Thiol-specific antioxidant peroxiredoxin (14.4%)" AVEAFVDTVSNELK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" IKAANPTAEKPFVLGLPTGSSPLGMYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (11.9%) GO:0005737 (2.4%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (11.9%) cytoplasm (2.4%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" LYCEATGDFQHNPEPLEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.10 (78.6%) 5.4.2.2 (14.3%) 5.4.2.8 (7.1%)" "phosphoglucosamine mutase (78.6%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (14.3%) phosphomannomutase (7.1%)" "GO:0005975 (14.1%) GO:0006048 (14.1%) GO:0009252 (14.1%)" GO:0005829 (14.1%) "GO:0004615 (14.1%) GO:0008966 (14.1%) GO:0000287 (13.5%)" "carbohydrate metabolic process (14.1%) UDP-N-acetylglucosamine biosynthetic process (14.1%) peptidoglycan biosynthetic process (14.1%)" cytosol (14.1%) "phosphomannomutase activity (14.1%) phosphoglucosamine mutase activity (14.1%) magnesium ion binding (13.5%)" "IPR005845 (10.3%) IPR005846 (10.3%) IPR016055 (10.3%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (10.3%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (10.3%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (10.3%)" ISVEEGKEFLSNYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.19 (100%) arginine decarboxylase (100%) "GO:0006527 (20.6%) GO:0008295 (20.6%) GO:0033388 (16.6%)" "GO:0008792 (20.9%) GO:0046872 (20.1%) GO:0004497 (0.9%)" "L-arginine catabolic process (20.6%) spermidine biosynthetic process (20.6%) putrescine biosynthetic process from arginine (16.6%)" "arginine decarboxylase activity (20.9%) metal ion binding (20.1%) monooxygenase activity (0.9%)" "IPR041128 (11.8%) IPR002985 (11.7%) IPR009006 (11.7%)" "Arginine decarboxylase, C-terminal helical (11.8%) Arginine decarboxylase (11.7%) Alanine racemase/group IV decarboxylase, C-terminal (11.7%)" EINDLLGISEPCETR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis YAYDKIIQAGGFTSVNTGGVPDANAIPIPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.3.99.1 (100%) Deleted entry (100%) "GO:0009060 (24.2%) GO:0022904 (24.2%)" "GO:0009055 (24.2%) GO:0051537 (24.2%) GO:0016491 (3%)" "aerobic respiration (24.2%) respiratory electron transport chain (24.2%)" "electron transfer activity (24.2%) 2 iron, 2 sulfur cluster binding (24.2%) oxidoreductase activity (3%)" "IPR006058 (14.3%) IPR009051 (14.3%) IPR012675 (14.3%)" "2Fe-2S ferredoxin, iron-sulphur binding site (14.3%) Alpha-helical ferredoxin (14.3%) Beta-grasp domain superfamily (14.3%)" DPSNSEKEAVLYIYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.7%) GO:0006508 (0.8%)" GO:0000428 (19.8%) "GO:0003677 (19.7%) GO:0003899 (19.7%) GO:0032549 (19.7%)" "DNA-templated transcription (19.7%) proteolysis (0.8%)" DNA-directed RNA polymerase complex (19.8%) "DNA binding (19.7%) DNA-directed RNA polymerase activity (19.7%) ribonucleoside binding (19.7%)" "IPR007642 (7.8%) IPR015712 (7.8%) IPR007644 (7.7%)" "RNA polymerase Rpb2, domain 2 (7.8%) DNA-directed RNA polymerase, subunit 2 (7.8%) RNA polymerase, beta subunit, protrusion (7.7%)" YDYQEVITPPIGNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.5%) GO:0005737 (16.5%) "GO:0000049 (16.5%) GO:0004829 (16.5%) GO:0005524 (16.5%)" threonyl-tRNA aminoacylation (16.5%) cytoplasm (16.5%) "tRNA binding (16.5%) threonine-tRNA ligase activity (16.5%) ATP binding (16.5%)" "IPR002314 (7.8%) IPR002320 (7.8%) IPR004154 (7.8%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.8%) Threonine-tRNA ligase, class IIa (7.8%) Anticodon-binding (7.8%)" QLEQEQMKQDVPSFRPGDTVEVK root "GO:0006412 (32.2%) GO:0000027 (0.1%) GO:0002181 (0.1%)" "GO:0022625 (31.8%) GO:0005840 (2%) GO:0005829 (0.7%)" "GO:0003735 (32.5%) GO:0070180 (0.1%)" "translation (32.2%) ribosomal large subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic large ribosomal subunit (31.8%) ribosome (2%) cytosol (0.7%)" "structural constituent of ribosome (32.5%) large ribosomal subunit rRNA binding (0.1%)" "IPR001857 (25.4%) IPR008991 (25.4%) IPR038657 (24.9%)" "Large ribosomal subunit protein bL19 (25.4%) Translation protein SH3-like domain superfamily (25.4%) Large ribosomal subunit protein bL19 superfamily (24.9%)" VNQIGTLTETLDAIEMAK Bacteria Bacteria 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.5%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.5%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" HEQGATHAAQGYAR Pseudomonadati Bacteria Pseudomonadati 2.2.1.6 (100%) acetolactate synthase (100%) "GO:0009097 (14.3%) GO:0009099 (14.3%)" GO:0005948 (14.3%) "GO:0003984 (14.3%) GO:0030976 (14.3%) GO:0050660 (14.3%)" "isoleucine biosynthetic process (14.3%) L-valine biosynthetic process (14.3%)" acetolactate synthase complex (14.3%) "acetolactate synthase activity (14.3%) thiamine pyrophosphate binding (14.3%) flavin adenine dinucleotide binding (14.3%)" "IPR012001 (11.7%) IPR029061 (11.7%) IPR045229 (11.7%)" "Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (11.7%) Thiamin diphosphate-binding fold (11.7%) Thiamine pyrophosphate enzyme (11.7%)" HGASCPVGMGVSCSADR root "4.2.1.2 (99.6%) 5.3.2.2 (0.2%) 4.-.-.- (0.1%)" "fumarate hydratase (99.6%) oxaloacetate tautomerase (0.2%) Lyases (0.1%)" "GO:0006099 (19.8%) GO:0006091 (0.1%) GO:0006106 (0.1%)" GO:0005829 (0.1%) "GO:0046872 (20.1%) GO:0051539 (20.1%) GO:0004333 (20%)" "tricarboxylic acid cycle (19.8%) generation of precursor metabolites and energy (0.1%) fumarate metabolic process (0.1%)" cytosol (0.1%) "metal ion binding (20.1%) 4 iron, 4 sulfur cluster binding (20.1%) fumarate hydratase activity (20%)" "IPR051208 (17.1%) IPR004646 (17.1%) IPR004647 (16.9%)" "Class-I Fumarase/Tartrate Dehydratase (17.1%) Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (17.1%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.9%)" LITPSGEEQAREEGIQVL Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" IIEKIDQDPENEEVKHTER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) GO:0071897 (24.6%) "GO:0000166 (24.6%) GO:0004748 (24.6%) GO:0031419 (24.6%)" DNA biosynthetic process (24.6%) "nucleotide binding (24.6%) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (24.6%) cobalamin binding (24.6%)" "IPR000788 (33.3%) IPR013344 (33.3%) IPR050862 (33.3%)" "Ribonucleotide reductase large subunit, C-terminal (33.3%) Ribonucleotide reductase, adenosylcobalamin-dependent (33.3%) Ribonucleoside diphosphate reductase class-2 (33.3%)" EAAIDLEFAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (58%) IPR019734 (40%) IPR036737 (2%)" "Tetratricopeptide-like helical domain superfamily (58%) Tetratricopeptide repeat (40%) OmpA-like domain superfamily (2%)" VALKYDSVNKVNAIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (17.6%) "GO:0005840 (17.3%) GO:1990904 (17.3%) GO:0005737 (16.3%)" "GO:0003735 (17.6%) GO:0019843 (13.6%)" translation (17.6%) "ribosome (17.3%) ribonucleoprotein complex (17.3%) cytoplasm (16.3%)" "structural constituent of ribosome (17.6%) rRNA binding (13.6%)" "IPR000630 (34.9%) IPR035987 (34.9%) IPR047863 (30.2%)" "Small ribosomal subunit protein uS8 (34.9%) Small ribosomal subunit protein uS8 superfamily (34.9%) Small ribosomal subunit protein uS8, conserved site (30.2%)" MIQEAQQGTLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (16.7%) IPR006665 (16.7%) IPR006690 (16.7%)" "Outer membrane protein, bacterial (16.7%) OmpA-like domain (16.7%) Outer membrane protein, OmpA-like, conserved site (16.7%)" FGEQLQAGNNNNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR021857 (100%) Protein of unknown function DUF3467 (100%) AKEIKYDMDAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.2%) GO:0005737 (15.7%) "GO:0005524 (17.2%) GO:0016853 (17.2%) GO:0140662 (17.2%)" protein refolding (17.2%) cytoplasm (15.7%) "ATP binding (17.2%) isomerase activity (17.2%) ATP-dependent protein folding chaperone (17.2%)" "IPR001844 (17%) IPR002423 (17%) IPR027409 (17%)" "Chaperonin Cpn60/GroEL (17%) Chaperonin Cpn60/GroEL/TCP-1 family (17%) GroEL-like apical domain superfamily (17%)" EGICGMCSLYVNGHPHGPATGATTCQLYMR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.3.5.1 (33.3%) 1.3.5.4 (33.3%) 1.3.99.1 (33.3%)" "succinate dehydrogenase (33.3%) Transferred entry: 1.3.5.1 (33.3%) Deleted entry (33.3%)" "GO:0009060 (24.6%) GO:0022904 (24.6%)" "GO:0009055 (24.6%) GO:0051537 (24.6%) GO:0016491 (1.4%)" "aerobic respiration (24.6%) respiratory electron transport chain (24.6%)" "electron transfer activity (24.6%) 2 iron, 2 sulfur cluster binding (24.6%) oxidoreductase activity (1.4%)" "IPR006058 (14.3%) IPR009051 (14.3%) IPR012675 (14.3%)" "2Fe-2S ferredoxin, iron-sulphur binding site (14.3%) Alpha-helical ferredoxin (14.3%) Beta-grasp domain superfamily (14.3%)" LENEPESSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) "GO:0004553 (41.7%) GO:0004565 (8.3%)" carbohydrate metabolic process (50%) "hydrolase activity, hydrolyzing O-glycosyl compounds (41.7%) beta-galactosidase activity (8.3%)" "IPR006102 (7.9%) IPR006103 (7.9%) IPR006104 (7.9%)" "Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.9%) Glycoside hydrolase family 2, catalytic domain (7.9%) Glycosyl hydrolases family 2, sugar binding domain (7.9%)" KLPEHLDVPMMACVDTEKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.4%) GO:0005737 (13.8%) "GO:0000049 (14.4%) GO:0002161 (14.4%) GO:0004813 (14.4%)" alanyl-tRNA aminoacylation (14.4%) cytoplasm (13.8%) "tRNA binding (14.4%) aminoacyl-tRNA deacylase activity (14.4%) alanine-tRNA ligase activity (14.4%)" "IPR003156 (9.4%) IPR012947 (9.4%) IPR018164 (9.4%)" "DHHA1 domain (9.4%) Threonyl/alanyl tRNA synthetase, SAD (9.4%) Alanyl-tRNA synthetase, class IIc, N-terminal (9.4%)" KDADLAMDAAACIGCGACAAACK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae "1.3.99.1 (85.7%) 1.3.5.1 (14.3%)" "Deleted entry (85.7%) succinate dehydrogenase (14.3%)" "GO:0009060 (22.6%) GO:0022904 (22.6%)" "GO:0009055 (21%) GO:0051537 (21%) GO:0016491 (9.7%)" "aerobic respiration (22.6%) respiratory electron transport chain (22.6%)" "electron transfer activity (21%) 2 iron, 2 sulfur cluster binding (21%) oxidoreductase activity (9.7%)" "IPR009051 (14%) IPR012675 (14%) IPR017896 (14%)" "Alpha-helical ferredoxin (14%) Beta-grasp domain superfamily (14%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14%)" TTLTAAITTVLAK root "3.6.5.3 (99.9%) 1.97.1.4 (0.1%)" "protein-synthesizing GTPase (99.9%) [formate-C-acetyltransferase]-activating enzyme (0.1%)" "GO:0006414 (0%) GO:0046677 (0%) GO:0070125 (0%)" "GO:0005829 (18.3%) GO:0032045 (6.8%) GO:0005886 (0.5%)" "GO:0003746 (19.1%) GO:0003924 (18.9%) GO:0005525 (18.9%)" "translational elongation (0%) response to antibiotic (0%) mitochondrial translational elongation (0%)" "cytosol (18.3%) guanyl-nucleotide exchange factor complex (6.8%) plasma membrane (0.5%)" "translation elongation factor activity (19.1%) GTPase activity (18.9%) GTP binding (18.9%)" "IPR000795 (11.6%) IPR050055 (11.6%) IPR027417 (11.6%)" "Translational (tr)-type GTP-binding domain (11.6%) Elongation factor Tu GTPase (11.6%) P-loop containing nucleoside triphosphate hydrolase (11.6%)" ISGEEDRYSHTDLWDFQANVEGSQK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006979 (0.6%) GO:0009411 (0.6%) GO:0009636 (0.6%)" "GO:0042597 (89%) GO:0030313 (7.8%) GO:0030288 (0.6%)" "response to oxidative stress (0.6%) response to UV (0.6%) response to toxic substance (0.6%)" "periplasmic space (89%) cell envelope (7.8%) outer membrane-bounded periplasmic space (0.6%)" "IPR018976 (14.7%) IPR034981 (14.7%) IPR038352 (14.7%)" "Imelysin-like domain (14.7%) EfeO/Algp7, imelysin-like domain (14.7%) Imelysin-like domain superfamily (14.7%)" ETLEDAVKHPEK root 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (5.6%) GO:0006950 (0.1%)" "GO:0005829 (39.5%) GO:0005737 (0.1%)" "GO:0008861 (48.5%) GO:0016829 (5.9%) GO:0003824 (0.2%)" "glucose metabolic process (5.6%) response to stress (0.1%)" "cytosol (39.5%) cytoplasm (0.1%)" "formate C-acetyltransferase activity (48.5%) lyase activity (5.9%) catalytic activity (0.2%)" "IPR001150 (24.4%) IPR050244 (24.3%) IPR019777 (24.3%)" "Glycine radical domain (24.4%) Autonomous Glycyl Radical Cofactor (24.3%) Formate C-acetyltransferase glycine radical, conserved site (24.3%)" EQTMLNVADNSGAR root "GO:0006412 (24.9%) GO:0002181 (0%)" "GO:0022625 (24.7%) GO:0005840 (0.4%) GO:1990904 (0.1%)" "GO:0003735 (24.9%) GO:0070180 (24.7%) GO:0019843 (0.1%)" "translation (24.9%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.7%) ribosome (0.4%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.9%) large ribosomal subunit rRNA binding (24.7%) rRNA binding (0.1%)" "IPR000218 (25.1%) IPR036853 (25.1%) IPR005745 (24.7%)" "Large ribosomal subunit protein uL14 (25.1%) Large ribosomal subunit protein uL14 superfamily (25.1%) Large ribosomal subunit protein uL14, bacteria (24.7%)" ELGCAHPEIVLHLDHGDTFETCK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "4.1.2.13 (90.9%) 4.1.2.- (9.1%)" "fructose-bisphosphate aldolase (90.9%) Aldehyde-lyases (9.1%)" "GO:0006096 (24.1%) GO:0030388 (24.1%) GO:0005975 (1.1%)" "GO:0008270 (25.3%) GO:0004332 (24.1%) GO:0016832 (1.1%)" "glycolytic process (24.1%) fructose 1,6-bisphosphate metabolic process (24.1%) carbohydrate metabolic process (1.1%)" "zinc ion binding (25.3%) fructose-bisphosphate aldolase activity (24.1%) aldehyde-lyase activity (1.1%)" "IPR000771 (25.3%) IPR013785 (25.3%) IPR050246 (25.3%)" "Fructose-bisphosphate aldolase, class-II (25.3%) Aldolase-type TIM barrel (25.3%) Class II Fructose-bisphosphate Aldolase (25.3%)" IENEDDAKVVSEIFNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR013022 (33.3%) IPR036237 (33.3%) IPR050312 (33.3%)" "Xylose isomerase-like, TIM barrel domain (33.3%) Xylose isomerase-like superfamily (33.3%) IolE/XylA/MocC-like (33.3%)" LYESGLITYMR root "5.6.2.1 (99.4%) 5.99.1.2 (0.6%)" "DNA topoisomerase (99.4%) Transferred entry: 5.6.2.1 (0.6%)" GO:0006265 (24.9%) "GO:0005694 (1.2%) GO:0005634 (0.2%)" "GO:0003677 (24.9%) GO:0003917 (24.9%) GO:0046872 (22.6%)" DNA topological change (24.9%) "chromosome (1.2%) nucleus (0.2%)" "DNA binding (24.9%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (24.9%) metal ion binding (22.6%)" "IPR000380 (7.3%) IPR013497 (7.3%) IPR023406 (7.3%)" "DNA topoisomerase, type IA (7.3%) DNA topoisomerase, type IA, central (7.3%) DNA topoisomerase, type IA, active site (7.3%)" CTSAHLGQAFTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016853 (100%) isomerase activity (100%) "IPR006311 (24.1%) IPR013022 (24.1%) IPR036237 (24.1%)" "Twin-arginine translocation pathway, signal sequence (24.1%) Xylose isomerase-like, TIM barrel domain (24.1%) Xylose isomerase-like superfamily (24.1%)" LNHNELLTYPNSYDQVMFGTVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (49.8%) "GO:0004332 (49.8%) GO:0016829 (0.5%)" glycolytic process (49.8%) "fructose-bisphosphate aldolase activity (49.8%) lyase activity (0.5%)" "IPR002915 (25.1%) IPR013785 (25.1%) IPR050456 (25.1%)" "DeoC/FbaB/LacD aldolase (25.1%) Aldolase-type TIM barrel (25.1%) DeoC/FbaB aldolase (25.1%)" RLIAELNDFLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.3%) GO:0006002 (13.9%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "response to glucose (14.3%) fructose 6-phosphate metabolic process (13.9%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25.2%) IPR011183 (25.2%) IPR035966 (25.2%)" "Phosphofructokinase domain (25.2%) Pyrophosphate-dependent phosphofructokinase PfpB (25.2%) Phosphofructokinase superfamily (25.2%)" QVAESIGIPRDEVENYGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.4.3 (100%) formate--tetrahydrofolate ligase (100%) GO:0035999 (33.3%) "GO:0004329 (33.3%) GO:0005524 (33.3%)" tetrahydrofolate interconversion (33.3%) "formate-tetrahydrofolate ligase activity (33.3%) ATP binding (33.3%)" "IPR000559 (33.3%) IPR020628 (33.3%) IPR027417 (33.3%)" "Formate-tetrahydrofolate ligase, FTHFS (33.3%) Formate-tetrahydrofolate ligase, FTHFS, conserved site (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" SNLSYQTPTDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0009328 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) phenylalanine-tRNA ligase complex (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002547 (7.7%) IPR004532 (7.7%) IPR005121 (7.7%)" "tRNA-binding domain (7.7%) Phenylalanine-tRNA ligase, class IIc, beta subunit, bacterial type (7.7%) Ferrodoxin-fold anticodon-binding domain (7.7%)" SDDDFESTLFNPNSPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.38 (100%) 3-deoxy-manno-octulosonate cytidylyltransferase (100%) "GO:0009103 (20%) GO:0033468 (20%)" "GO:0005829 (20%) GO:0016020 (20%)" GO:0008690 (20%) "lipopolysaccharide biosynthetic process (20%) CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process (20%)" "cytosol (20%) membrane (20%)" 3-deoxy-manno-octulosonate cytidylyltransferase activity (20%) "IPR003329 (33.3%) IPR004528 (33.3%) IPR029044 (33.3%)" "Acylneuraminate cytidylyltransferase (33.3%) 3-deoxy-D-manno-octulosonate cytidylyltransferase (33.3%) Nucleotide-diphospho-sugar transferases (33.3%)" EVKFESQDRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR025964 (100%) GGGtGRT protein (100%) TISANKETAHKEWVVVDATDQVVGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (20.3%) GO:0017148 (18.8%)" "GO:0022625 (18.8%) GO:0005840 (1.4%) GO:1990904 (1.4%)" "GO:0003735 (20.3%) GO:0003729 (18.8%)" "translation (20.3%) negative regulation of translation (18.8%)" "cytosolic large ribosomal subunit (18.8%) ribosome (1.4%) ribonucleoprotein complex (1.4%)" "structural constituent of ribosome (20.3%) mRNA binding (18.8%)" "IPR005822 (25.9%) IPR036899 (25.9%) IPR005823 (24.1%)" "Large ribosomal subunit protein uL13 (25.9%) Large ribosomal subunit protein uL13 superfamily (25.9%) Large ribosomal subunit protein uL13, bacteria (24.1%)" LLVVYPWTQR root "GO:0042744 (7.9%) GO:0015671 (0.3%) GO:0048821 (0.2%)" "GO:0005833 (9.1%) GO:0031838 (8%) GO:0072562 (7.7%)" "GO:0019825 (9.1%) GO:0020037 (9.1%) GO:0005344 (9.1%)" "hydrogen peroxide catabolic process (7.9%) oxygen transport (0.3%) erythrocyte development (0.2%)" "hemoglobin complex (9.1%) haptoglobin-hemoglobin complex (8%) blood microparticle (7.7%)" "oxygen binding (9.1%) heme binding (9.1%) oxygen carrier activity (9.1%)" "IPR000971 (20%) IPR009050 (20%) IPR012292 (20%)" "Globin (20%) Globin-like superfamily (20%) Globin/Protoglobin (20%)" ALNYPNVGPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR005097 (33.3%) IPR032095 (33.3%) IPR036291 (33.3%)" "Saccharopine dehydrogenase, NADP binding domain (33.3%) Saccharopine dehydrogenase-like, C-terminal (33.3%) NAD(P)-binding domain superfamily (33.3%)" GAHGGGAFSGKDPSKVDR root 2.5.1.6 (100%) methionine adenosyltransferase (100%) "GO:0006556 (17.2%) GO:0006730 (17.2%)" "GO:0005737 (13.7%) GO:0005829 (0.1%) GO:0016020 (0%)" "GO:0004478 (17.2%) GO:0005524 (17.2%) GO:0000287 (13.4%)" "S-adenosylmethionine biosynthetic process (17.2%) one-carbon metabolic process (17.2%)" "cytoplasm (13.7%) cytosol (0.1%) membrane (0%)" "methionine adenosyltransferase activity (17.2%) ATP binding (17.2%) magnesium ion binding (13.4%)" "IPR002133 (16.7%) IPR022630 (16.7%) IPR022631 (16.7%)" "S-adenosylmethionine synthetase (16.7%) S-adenosylmethionine synthetase, C-terminal (16.7%) S-adenosylmethionine synthetase, conserved site (16.7%)" SDIIDAEVLDAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.95 (71.4%) 1.1.1.290 (14.3%) 1.1.1.81 (14.3%)" "phosphoglycerate dehydrogenase (71.4%) 4-phosphoerythronate dehydrogenase (14.3%) hydroxypyruvate reductase (14.3%)" GO:0006564 (0.4%) "GO:0051287 (48.3%) GO:0016616 (39.8%) GO:0004617 (6.9%)" L-serine biosynthetic process (0.4%) "NAD binding (48.3%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (39.8%) phosphoglycerate dehydrogenase activity (6.9%)" "IPR006139 (33.3%) IPR036291 (33.3%) IPR006140 (33.1%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) NAD(P)-binding domain superfamily (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.1%)" EYNIENTFVHCFMDGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.2.12 (95.7%) 5.4.2.1 (4.3%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (95.7%) Transferred entry: 5.4.2.11 and 5.4.2.12 (4.3%)" "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" VKVGDTVIEFDLPLLEEK root 2.7.1.199 (100%) protein-N(pi)-phosphohistidine--D-glucose phosphotransferase (100%) "GO:0009401 (32.1%) GO:0034763 (0.3%) GO:0043610 (0.3%)" "GO:0005737 (31.5%) GO:0005829 (0.3%) GO:0016020 (0.3%)" "GO:0016301 (31.8%) GO:0016740 (0.9%) GO:0046872 (0.9%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (32.1%) negative regulation of transmembrane transport (0.3%) regulation of carbohydrate utilization (0.3%)" "cytoplasm (31.5%) cytosol (0.3%) membrane (0.3%)" "kinase activity (31.8%) transferase activity (0.9%) metal ion binding (0.9%)" "IPR001127 (32.9%) IPR011055 (32.9%) IPR050890 (32.6%)" "Phosphotransferase system, sugar-specific permease EIIA type 1 (32.9%) Duplicated hybrid motif (32.9%) Phosphotransferase system EIIA component (32.6%)" LTAEGFANKVNSVPNSEVQNVFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50%) GO:0046872 (50%)" "alkaline phosphatase activity (50%) metal ion binding (50%)" "IPR001952 (50%) IPR017850 (50%)" "Alkaline phosphatase (50%) Alkaline-phosphatase-like, core domain superfamily (50%)" VIMDGDKPEHLLEAVPVMGCYCDVIGVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.1.3.11 (100%) N-succinylornithine carbamoyltransferase (100%) "GO:0019240 (25%) GO:0042450 (25%)" "GO:0004585 (25%) GO:0016597 (25%)" "citrulline biosynthetic process (25%) L-arginine biosynthetic process via ornithine (25%)" "ornithine carbamoyltransferase activity (25%) amino acid binding (25%)" "IPR006130 (20%) IPR006131 (20%) IPR006132 (20%)" "Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20%)" HDNSVGVTDPIYPVYIDSNVMCGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.6.1.83 (100%) LL-diaminopimelate aminotransferase (100%) "GO:0033362 (32.6%) GO:0009089 (0.5%)" "GO:0010285 (33.2%) GO:0030170 (33.2%) GO:0008483 (0.5%)" "lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway (32.6%) lysine biosynthetic process via diaminopimelate (0.5%)" "L,L-diaminopimelate aminotransferase activity (33.2%) pyridoxal phosphate binding (33.2%) transaminase activity (0.5%)" "IPR004839 (20%) IPR015421 (20%) IPR015422 (20%)" "Aminotransferase, class I/classII, large domain (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" QILPDPVFGDVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20.2%) GO:0015935 (20.2%) "GO:0003735 (20.2%) GO:0019843 (20.2%) GO:0000049 (19.4%)" translation (20.2%) small ribosomal subunit (20.2%) "structural constituent of ribosome (20.2%) rRNA binding (20.2%) tRNA binding (19.4%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" KTTEAAPAAEVPATEEPKAESAE Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (35.3%) IPR036373 (35.3%) IPR047859 (29.4%)" "Large ribosomal subunit protein bL17 (35.3%) Large ribosomal subunit protein bL17 superfamily (35.3%) Large ribosomal subunit protein bL17, conserved site (29.4%)" LGVYTIEDYEAGNCQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.7%) IPR012910 (12.7%) IPR023996 (12.7%)" "TonB-dependent receptor-like, beta-barrel (12.7%) TonB-dependent receptor, plug domain (12.7%) TonB-dependent outer membrane protein, SusC/RagA (12.7%)" KSYAFYSIVIADVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (24.9%) "GO:0005737 (24.9%) GO:0015935 (24.9%) GO:0005840 (0.4%)" GO:0003735 (24.9%) translation (24.9%) "cytoplasm (24.9%) small ribosomal subunit (24.9%) ribosome (0.4%)" structural constituent of ribosome (24.9%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" RGQVEGMESSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.7%) GO:0005737 (18.1%) "GO:0003746 (20.8%) GO:0005525 (20.7%) GO:0003924 (19.7%)" ribosome disassembly (20.7%) cytoplasm (18.1%) "translation elongation factor activity (20.8%) GTP binding (20.7%) GTPase activity (19.7%)" "IPR000640 (6.4%) IPR005517 (6.4%) IPR014721 (6.4%)" "Elongation factor EFG, domain V-like (6.4%) Translation elongation factor EFG/EF2, domain IV (6.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.4%)" ETIKGYGYEWYAPNIGIVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0046872 (100%) metal ion binding (100%) IPR049279 (100%) DUF3108-like (100%) MKQETQQQTASTTTSQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033103 (50%) GO:0033104 (50%) protein secretion by the type VI secretion system (50%) type VI protein secretion system complex (50%) IPR035576 (100%) Type VI secretion system TssC (100%) GVPVIGVIYVPVRK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.1.3.7 (100%) 3'(2'),5'-bisphosphate nucleotidase (100%) "GO:0000103 (19.6%) GO:0050427 (19.6%) GO:0000105 (0.7%)" GO:0005886 (19.6%) "GO:0000287 (19.6%) GO:0008441 (19.6%) GO:0016791 (0.7%)" "sulfate assimilation (19.6%) 3'-phosphoadenosine 5'-phosphosulfate metabolic process (19.6%) L-histidine biosynthetic process (0.7%)" plasma membrane (19.6%) "magnesium ion binding (19.6%) 3'(2'),5'-bisphosphate nucleotidase activity (19.6%) phosphatase activity (0.7%)" "IPR000760 (25.2%) IPR020583 (25.2%) IPR006240 (24.4%)" "Inositol monophosphatase-like (25.2%) Inositol monophosphatase, metal-binding site (25.2%) 3'(2'),5'-bisphosphate nucleotidase CysQ (24.4%)" GYEIHISDEALK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0034605 (17%) GO:0042026 (15.9%) GO:0006508 (0.1%)" "GO:0005829 (15.6%) GO:0005737 (1.5%) GO:0016020 (0%)" "GO:0005524 (17%) GO:0016887 (17%) GO:0042802 (15.6%)" "cellular response to heat (17%) protein refolding (15.9%) proteolysis (0.1%)" "cytosol (15.6%) cytoplasm (1.5%) membrane (0%)" "ATP binding (17%) ATP hydrolysis activity (17%) identical protein binding (15.6%)" "IPR019489 (8.6%) IPR027417 (8.6%) IPR050130 (8.6%)" "Clp ATPase, C-terminal (8.6%) P-loop containing nucleoside triphosphate hydrolase (8.6%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%)" ITSMIATVGFYEHTGDWLYTSGIPAK CDEEMIKDLNNHFMGECTEVGMYLAMSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (50%) GO:0016491 (23.2%) GO:0004601 (14.8%)" "iron ion binding (50%) oxidoreductase activity (23.2%) peroxidase activity (14.8%)" "IPR003251 (12.7%) IPR009040 (12.7%) IPR009078 (12.7%)" "Rubrerythrin, diiron-binding domain (12.7%) Ferritin-like diiron domain (12.7%) Ferritin-like superfamily (12.7%)" ALTALSDEEVIYKEEHSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (19.9%) GO:0005829 (19.9%) "GO:0002161 (20%) GO:0004832 (20%) GO:0005524 (20%)" valyl-tRNA aminoacylation (19.9%) cytosol (19.9%) "aminoacyl-tRNA deacylase activity (20%) valine-tRNA ligase activity (20%) ATP binding (20%)" "IPR002300 (9.2%) IPR002303 (9.2%) IPR009008 (9.2%)" "Aminoacyl-tRNA synthetase, class Ia (9.2%) Valine-tRNA ligase (9.2%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (9.2%)" NYNLANAYIGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" RTGCQEIEAYFLASDYAYRQEPSAEAAVGLGKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (43.5%) IPR019734 (43.5%) IPR013105 (13%)" "Tetratricopeptide-like helical domain superfamily (43.5%) Tetratricopeptide repeat (43.5%) Tetratricopeptide repeat 2 (13%)" RAHLLFTDIER Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.4.1.1 (100%) glycogen phosphorylase (100%) "GO:0005975 (32.8%) GO:0005978 (0.4%)" "GO:0030170 (33.2%) GO:0008184 (33%) GO:0004373 (0.4%)" "carbohydrate metabolic process (32.8%) glycogen biosynthetic process (0.4%)" "pyridoxal phosphate binding (33.2%) glycogen phosphorylase activity (33%) alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (0.4%)" "IPR011834 (25%) IPR052182 (25%) IPR000811 (24.9%)" "Alpha-glucan phosphorylase (25%) Glycogen_Maltodextrin_Phosphorylase (25%) Glycosyl transferase, family 35 (24.9%)" GLVQRPIDLPDGSMIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.4.21.102 (56.4%) 3.4.21.- (43.6%)" "C-terminal processing peptidase (56.4%) Serine endopeptidases (43.6%)" "GO:0006508 (20.5%) GO:0007165 (20.5%)" "GO:0030288 (20.5%) GO:0016020 (0.3%)" "GO:0004175 (17.8%) GO:0008236 (17.8%) GO:0004252 (2.7%)" "proteolysis (20.5%) signal transduction (20.5%)" "outer membrane-bounded periplasmic space (20.5%) membrane (0.3%)" "endopeptidase activity (17.8%) serine-type peptidase activity (17.8%) serine-type endopeptidase activity (2.7%)" "IPR004447 (16.8%) IPR005151 (16.8%) IPR029045 (16.7%)" "C-terminal-processing peptidase S41A (16.8%) Tail specific protease (16.8%) ClpP/crotonase-like domain superfamily (16.7%)" LMNIMNTSEELHQWGNNHK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (13.2%) GO:0006526 (13.2%) GO:0006541 (13.2%)" GO:0005737 (13.2%) "GO:0004088 (13.2%) GO:0005524 (13.2%) GO:0046872 (13.2%)" "pyrimidine nucleotide biosynthetic process (13.2%) L-arginine biosynthetic process (13.2%) glutamine metabolic process (13.2%)" cytoplasm (13.2%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.2%) ATP binding (13.2%) metal ion binding (13.2%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" LAFDEFDELAGDR root "2.1.3.15 (97.6%) 6.4.1.2 (2.4%)" "acetyl-CoA carboxytransferase (97.6%) acetyl-CoA carboxylase (2.4%)" "GO:0006633 (16.6%) GO:2001295 (16.5%) GO:0006260 (0%)" "GO:0009317 (16.6%) GO:0005737 (0%) GO:0005829 (0%)" "GO:0003989 (16.6%) GO:0005524 (16.6%) GO:0016743 (16.6%)" "fatty acid biosynthetic process (16.6%) malonyl-CoA biosynthetic process (16.5%) DNA replication (0%)" "acetyl-CoA carboxylase complex (16.6%) cytoplasm (0%) cytosol (0%)" "acetyl-CoA carboxylase activity (16.6%) ATP binding (16.6%) carboxyl- or carbamoyltransferase activity (16.6%)" "IPR001095 (33.2%) IPR011763 (33.2%) IPR029045 (33.2%)" "Acetyl-CoA carboxylase, alpha subunit (33.2%) Acetyl-coenzyme A carboxyltransferase, C-terminal (33.2%) ClpP/crotonase-like domain superfamily (33.2%)" YSDGLHQAIEAK root "7.4.2.8 (100%) 7.4.2.4 (0%)" "protein-secreting ATPase (100%) chloroplast protein-transporting ATPase (0%)" "GO:0006605 (11.5%) GO:0017038 (11.5%) GO:0043952 (11.4%)" "GO:0005886 (11.5%) GO:0005829 (11.5%) GO:0031522 (11.4%)" "GO:0005524 (11.5%) GO:0046872 (7.6%) GO:0004386 (0.3%)" "protein targeting (11.5%) protein import (11.5%) protein transport by the Sec complex (11.4%)" "plasma membrane (11.5%) cytosol (11.5%) cell envelope Sec protein transport complex (11.4%)" "ATP binding (11.5%) metal ion binding (7.6%) helicase activity (0.3%)" "IPR000185 (8%) IPR011115 (8%) IPR014018 (8%)" "Protein translocase subunit SecA (8%) SecA DEAD-like, N-terminal (8%) SecA motor DEAD (8%)" DKGDLSENAEYDAAKEAQGMLEMK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006354 (20.1%) GO:0032784 (20.1%)" "GO:0003677 (20.1%) GO:0070063 (20.1%) GO:0003746 (19.6%)" "DNA-templated transcription elongation (20.1%) regulation of DNA-templated transcription elongation (20.1%)" "DNA binding (20.1%) RNA polymerase binding (20.1%) translation elongation factor activity (19.6%)" "IPR022691 (12.6%) IPR023459 (12.6%) IPR036805 (12.6%)" "Transcription elongation factor, GreA/GreB, N-terminal (12.6%) Transcription elongation factor GreA/GreB family (12.6%) Transcription elongation factor, GreA/GreB, N-terminal domain superfamily (12.6%)" SQLDWLVPHQANLR root "2.3.1.180 (96%) 2.3.1.41 (4%)" "beta-ketoacyl-[acyl-carrier-protein] synthase III (96%) beta-ketoacyl-[acyl-carrier-protein] synthase I (4%)" "GO:0006633 (25.3%) GO:0044550 (0.3%) GO:0006631 (0.1%)" "GO:0005737 (23.3%) GO:0005829 (0.1%)" "GO:0004315 (25.3%) GO:0033818 (25%) GO:0016746 (0.4%)" "fatty acid biosynthetic process (25.3%) secondary metabolite biosynthetic process (0.3%) fatty acid metabolic process (0.1%)" "cytoplasm (23.3%) cytosol (0.1%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (25.3%) beta-ketoacyl-acyl-carrier-protein synthase III activity (25%) acyltransferase activity (0.4%)" "IPR013747 (25.2%) IPR016039 (25.2%) IPR013751 (24.9%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (25.2%) Thiolase-like (25.2%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (24.9%)" KVIVAVTDAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20.1%) IPR018189 (20.1%) IPR046348 (20.1%)" "Phosphoglucose isomerase (PGI) (20.1%) Phosphoglucose isomerase, conserved site (20.1%) SIS domain superfamily (20.1%)" TQVYPTVEEYADEVCK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (75%) GO:0004340 (25%)" "kinase activity (75%) glucokinase activity (25%)" "IPR000600 (33.3%) IPR043129 (33.3%) IPR049874 (33.3%)" "ROK family (33.3%) ATPase, nucleotide binding domain (33.3%) ROK, conserved site (33.3%)" AEVVNDEAKGPK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR001787 (25%) IPR018258 (25%) IPR028909 (25%)" "Large ribosomal subunit protein bL21 (25%) Large ribosomal subunit protein bL21, conserved site (25%) Large ribosomal subunit protein bL21-like (25%)" NQFDFNDFLSQIHQIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) GO:0048500 (20%) "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (20%)" SRP-dependent cotranslational protein targeting to membrane (20%) signal recognition particle (20%) "GTPase activity (20%) GTP binding (20%) 7S RNA binding (20%)" "IPR000897 (11.1%) IPR003593 (11.1%) IPR004125 (11.1%)" "Signal recognition particle, SRP54 subunit, GTPase domain (11.1%) AAA+ ATPase domain (11.1%) Signal recognition particle, SRP54 subunit, M-domain (11.1%)" TYDDLDYDMLSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" VMYLPEGIAGIPQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "4.1.1.12 (94.1%) 2.6.1.1 (5.9%)" "aspartate 4-decarboxylase (94.1%) aspartate transaminase (5.9%)" GO:0006520 (27.3%) "GO:0030170 (27.3%) GO:0008483 (24.7%) GO:0047688 (10.4%)" amino acid metabolic process (27.3%) "pyridoxal phosphate binding (27.3%) transaminase activity (24.7%) aspartate 4-decarboxylase activity (10.4%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" NKIGDLILPIAAIR Pseudomonadati Bacteria Pseudomonadati 3.2.2.4 (100%) AMP nucleosidase (100%) GO:0009116 (33.3%) GO:0005829 (33.3%) "GO:0008714 (32.7%) GO:0003824 (0.6%)" nucleoside metabolic process (33.3%) cytosol (33.3%) "AMP nucleosidase activity (32.7%) catalytic activity (0.6%)" "IPR000845 (25.2%) IPR035994 (25.2%) IPR010944 (24.8%)" "Nucleoside phosphorylase domain (25.2%) Nucleoside phosphorylase superfamily (25.2%) AMP nucleosidase, putative (24.8%)" VKCYGADDVR Bacteria Bacteria IPR025964 (100%) GGGtGRT protein (100%) IDKEAAAEVK Bacteroidota Bacteria Pseudomonadati Bacteroidota 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.4%) GO:0043335 (16.4%) GO:0051083 (16.4%)" "GO:0003755 (16.4%) GO:0043022 (16.4%) GO:0044183 (16.4%)" "protein transport (16.4%) protein unfolding (16.4%) 'de novo' cotranslational protein folding (16.4%)" "peptidyl-prolyl cis-trans isomerase activity (16.4%) ribosome binding (16.4%) protein folding chaperone (16.4%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" LAVIQGLKDCIVAESGNVLLICKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.13 (100%) mannose-1-phosphate guanylyltransferase (100%) GO:0009298 (32%) "GO:0004475 (32%) GO:0005525 (32%) GO:0016853 (4%)" GDP-mannose biosynthetic process (32%) "mannose-1-phosphate guanylyltransferase (GTP) activity (32%) GTP binding (32%) isomerase activity (4%)" "IPR005835 (25%) IPR029044 (25%) IPR049577 (25%)" "Nucleotidyl transferase domain (25%) Nucleotide-diphospho-sugar transferases (25%) GDP-mannose pyrophosphorylase, N-terminal domain (25%)" QSIDLISKFPTIIAYAFNMLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.3.1 (100%) citrate (Si)-synthase (100%) "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (25%) "GO:0036440 (22.4%) GO:0046912 (2.6%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (25%) "citrate synthase activity (22.4%) acyltransferase activity, acyl groups converted into alkyl on transfer (2.6%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" VISGINPYASEYSLKPNEIFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.22 (100%) alpha-galactosidase (100%) GO:0016052 (49.4%) "GO:0004557 (49.4%) GO:0016301 (1.2%)" carbohydrate catabolic process (49.4%) "alpha-galactosidase activity (49.4%) kinase activity (1.2%)" "IPR002252 (11.3%) IPR013785 (11.3%) IPR017853 (11.3%)" "Glycoside hydrolase family 36 (11.3%) Aldolase-type TIM barrel (11.3%) Glycoside hydrolase superfamily (11.3%)" AANLPQQMIENIAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (48.4%) GO:0003746 (51.6%) cytoplasm (48.4%) translation elongation factor activity (51.6%) "IPR001816 (20.3%) IPR014039 (20.3%) IPR036402 (20.3%)" "Translation elongation factor EFTs/EF1B (20.3%) Translation elongation factor EFTs/EF1B, dimerisation (20.3%) Elongation factor Ts, dimerisation domain superfamily (20.3%)" MNILDLEGQNIMNILAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.3.16 (66.7%) 2.3.3.1 (33.3%)" "citrate synthase (unknown stereospecificity) (66.7%) citrate (Si)-synthase (33.3%)" "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (25%) "GO:0036440 (16.5%) GO:0046912 (8.5%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (25%) "citrate synthase activity (16.5%) acyltransferase activity, acyl groups converted into alkyl on transfer (8.5%)" "IPR002020 (20.3%) IPR016142 (20.3%) IPR036969 (20.3%)" "Citrate synthase (20.3%) Citrate synthase-like, large alpha subdomain (20.3%) Citrate synthase superfamily (20.3%)" IENQEGVDNIEEILEVAYGVMIAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.40 (100%) pyruvate kinase (100%) "GO:0000287 (20%) GO:0004743 (20%) GO:0005524 (20%)" "magnesium ion binding (20%) pyruvate kinase activity (20%) ATP binding (20%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" AGAYVSNGKFDHIMMAWETSITK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (35.1%) "GO:0016616 (29.8%) GO:0016615 (28.1%) GO:0030060 (7%)" malate metabolic process (35.1%) "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (29.8%) malate dehydrogenase activity (28.1%) L-malate dehydrogenase (NAD+) activity (7%)" "IPR015955 (17.6%) IPR022383 (17.6%) IPR010945 (16.8%)" "Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (17.6%) Lactate/malate dehydrogenase, C-terminal (17.6%) Malate dehydrogenase, type 2 (16.8%)" VIGHLAHGNLEYKHPYLEDR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0042777 (17.8%) GO:0015986 (0.2%)" "GO:0005886 (19.5%) GO:0045259 (19.5%) GO:0016020 (0.2%)" "GO:0046933 (19.5%) GO:0005524 (17.8%) GO:0016787 (5.3%)" "proton motive force-driven plasma membrane ATP synthesis (17.8%) proton motive force-driven ATP synthesis (0.2%)" "plasma membrane (19.5%) proton-transporting ATP synthase complex (19.5%) membrane (0.2%)" "proton-transporting ATP synthase activity, rotational mechanism (19.5%) ATP binding (17.8%) hydrolase activity (5.3%)" "IPR000131 (34.3%) IPR035968 (34.3%) IPR023632 (31.3%)" "ATP synthase, F1 complex, gamma subunit (34.3%) ATP synthase, F1 complex, gamma subunit superfamily (34.3%) ATP synthase, F1 complex, gamma subunit conserved site (31.3%)" IYPAVDITASSTR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.3%) GO:0005829 (14%) "GO:0003723 (14.3%) GO:0004386 (14.3%) GO:0005524 (14.3%)" DNA-templated transcription termination (14.3%) cytosol (14%) "RNA binding (14.3%) helicase activity (14.3%) ATP binding (14.3%)" "IPR000194 (10%) IPR003593 (10%) IPR004665 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) Transcription termination factor Rho (10%)" NVASLQGAEVKEVLLNAGMWPFIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (20%) IPR011053 (20%) IPR022615 (20%)" "Na(+)-translocating NADH-quinone reductase subunit A (20%) Single hybrid motif (20%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (20%)" HINEILDDLKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.2%) GO:0009090 (17.2%) GO:0009088 (13.8%)" GO:0005829 (17.2%) "GO:0004072 (17.2%) GO:0005524 (17.2%) GO:0016301 (0.3%)" "lysine biosynthetic process via diaminopimelate (17.2%) homoserine biosynthetic process (17.2%) threonine biosynthetic process (13.8%)" cytosol (17.2%) "aspartate kinase activity (17.2%) ATP binding (17.2%) kinase activity (0.3%)" "IPR045865 (12.9%) IPR054352 (12.8%) IPR036393 (12.6%)" "ACT-like domain (12.9%) Aspartokinase, ACT domain (12.8%) Acetylglutamate kinase-like superfamily (12.6%)" AAQYPGIEVVPLQVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.-.-.- (100%) Translocases (100%) GO:0022900 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0046872 (20%) GO:0051539 (20%)" electron transport chain (20%) plasma membrane (20%) "electron transfer activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR010208 (14.3%) IPR011538 (14.3%) IPR017896 (14.3%)" "Ion-translocating oxidoreductase complex, subunit RnfC/RsxC (14.3%) NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain (14.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14.3%)" GSAKHEVVDKVVEALAIAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0008959 (50%) GO:0016407 (50%)" "phosphate acetyltransferase activity (50%) acetyltransferase activity (50%)" "IPR002505 (16.7%) IPR004614 (16.7%) IPR012147 (16.7%)" "Phosphate acetyl/butaryl transferase (16.7%) Phosphate acetyltransferase (16.7%) Phosphate acetyl/butyryltransferase (16.7%)" CQYDEKDSIGKR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.8%) GO:0015966 (12%) GO:0044281 (0.8%)" "GO:0005737 (12.8%) GO:0070062 (12%) GO:1990742 (12%)" "GO:0004820 (12.8%) GO:0005524 (12.8%) GO:0004081 (12%)" "glycyl-tRNA aminoacylation (12.8%) diadenosine tetraphosphate biosynthetic process (12%) small molecule metabolic process (0.8%)" "cytoplasm (12.8%) extracellular exosome (12%) microvesicle (12%)" "glycine-tRNA ligase activity (12.8%) ATP binding (12.8%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12%)" "IPR004154 (11.3%) IPR027031 (11.3%) IPR036621 (11.3%)" "Anticodon-binding (11.3%) Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 (11.3%) Anticodon-binding domain superfamily (11.3%)" EAEAYPGPSIVIAYAPCINHGLK Bacteria Bacteria "1.2.7.1 (78.6%) 1.2.1.51 (10.7%) 1.2.7.- (10.7%)" "pyruvate synthase (78.6%) pyruvate dehydrogenase (NADP(+)) (10.7%) With an iron-sulfur protein as acceptor (10.7%)" "GO:0006979 (15.5%) GO:0022900 (15.1%) GO:0044281 (9.7%)" "GO:0005506 (15.1%) GO:0051539 (15.1%) GO:0030976 (13.5%)" "response to oxidative stress (15.5%) electron transport chain (15.1%) small molecule metabolic process (9.7%)" "iron ion binding (15.1%) 4 iron, 4 sulfur cluster binding (15.1%) thiamine pyrophosphate binding (13.5%)" "IPR029061 (8%) IPR050722 (8%) IPR002869 (7.8%)" "Thiamin diphosphate-binding fold (8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (8%) Pyruvate-flavodoxin oxidoreductase, central domain (7.8%)" IFPAVNIVASSTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.4%) GO:0005829 (13.9%) "GO:0003723 (14.4%) GO:0005524 (14.4%) GO:0008186 (14.4%)" DNA-templated transcription termination (14.4%) cytosol (13.9%) "RNA binding (14.4%) ATP binding (14.4%) ATP-dependent activity, acting on RNA (14.4%)" "IPR004665 (10.8%) IPR027417 (10.8%) IPR000194 (10.8%)" "Transcription termination factor Rho (10.8%) P-loop containing nucleoside triphosphate hydrolase (10.8%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.8%)" DNAATWDVAGYIQKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" YLNFNQLSQYTEK root "4.2.1.3 (53.8%) 4.2.1.99 (46.3%)" "aconitate hydratase (53.8%) 2-methylisocitrate dehydratase (46.3%)" "GO:0006099 (12.7%) GO:0019629 (12.7%) GO:0006097 (0.1%)" GO:0005829 (12.7%) "GO:0003994 (12.8%) GO:0046872 (12.7%) GO:0047456 (12.7%)" "tricarboxylic acid cycle (12.7%) propionate catabolic process, 2-methylcitrate cycle (12.7%) glyoxylate cycle (0.1%)" cytosol (12.7%) "aconitate hydratase activity (12.8%) metal ion binding (12.7%) 2-methylisocitrate dehydratase activity (12.7%)" "IPR015931 (10.1%) IPR036008 (10%) IPR001030 (9.8%)" "Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (10.1%) Aconitase, iron-sulfur domain (10%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (9.8%)" ELGIPAVVGCGDATER root "2.7.9.2 (99.9%) 2.7.-.- (0.1%)" "pyruvate, water dikinase (99.9%) Transferring phosphorus-containing groups (0.1%)" GO:0006094 (21.7%) "GO:0005524 (26%) GO:0008986 (26%) GO:0046872 (26%)" gluconeogenesis (21.7%) "ATP binding (26%) pyruvate, water dikinase activity (26%) metal ion binding (26%)" "IPR006319 (10.1%) IPR008279 (10.1%) IPR036637 (10.1%)" "Phosphoenolpyruvate synthase (10.1%) PEP-utilising enzyme, mobile domain (10.1%) Phosphohistidine domain superfamily (10.1%)" IQRPWLVTSCEWNDKLIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.1%) GO:0006044 (32.1%)" "GO:0004342 (33%) GO:0016853 (2.9%)" "carbohydrate metabolic process (32.1%) N-acetylglucosamine metabolic process (32.1%)" "glucosamine-6-phosphate deaminase activity (33%) isomerase activity (2.9%)" "IPR037171 (14.8%) IPR052960 (14.8%) IPR003737 (14.4%)" "NagB/RpiA transferase-like (14.8%) Glucosamine-6-phosphate deaminase-like (14.8%) N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.4%)" ANDCDQQEGTGNERR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR016181 (33.3%) IPR016732 (33.3%) IPR024320 (33.3%)" "Acyl-CoA N-acyltransferase (33.3%) Uncharacterised conserved protein UCP018688 (33.3%) Phosphatidylglycerol lysyltransferase, C-terminal (33.3%)" VITKEDIIEIIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.7%) GO:0006508 (0.6%)" GO:0000428 (19.8%) "GO:0003677 (19.7%) GO:0003899 (19.7%) GO:0032549 (19.7%)" "DNA-templated transcription (19.7%) proteolysis (0.6%)" DNA-directed RNA polymerase complex (19.8%) "DNA binding (19.7%) DNA-directed RNA polymerase activity (19.7%) ribonucleoside binding (19.7%)" "IPR007642 (7.9%) IPR015712 (7.9%) IPR007644 (7.8%)" "RNA polymerase Rpb2, domain 2 (7.9%) DNA-directed RNA polymerase, subunit 2 (7.9%) RNA polymerase, beta subunit, protrusion (7.8%)" IKEALAEQFAPQSDFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" AQYLIDQLLAEAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.2.4.1 (100%) pyruvate dehydrogenase (acetyl-transferring) (100%) GO:0042867 (0.4%) "GO:0005829 (0.4%) GO:0016020 (0.4%) GO:0045254 (0.4%)" "GO:0000287 (45.1%) GO:0004739 (34.9%) GO:0016491 (15.3%)" pyruvate catabolic process (0.4%) "cytosol (0.4%) membrane (0.4%) pyruvate dehydrogenase complex (0.4%)" "magnesium ion binding (45.1%) pyruvate dehydrogenase (acetyl-transferring) activity (34.9%) oxidoreductase activity (15.3%)" "IPR029061 (13.3%) IPR051157 (13.2%) IPR005474 (12.4%)" "Thiamin diphosphate-binding fold (13.3%) Pyruvate Dehydrogenase/Transketolase (13.2%) Transketolase, N-terminal (12.4%)" GYVPADENREYCTDVNVIPIDSIYTPIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.6%) "GO:0000428 (16.8%) GO:0005737 (16.6%)" "GO:0003677 (16.6%) GO:0003899 (16.6%) GO:0046983 (16.6%)" DNA-templated transcription (16.6%) "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.6%)" "DNA binding (16.6%) DNA-directed RNA polymerase activity (16.6%) protein dimerization activity (16.6%)" "IPR011262 (16.7%) IPR011263 (16.7%) IPR011773 (16.7%)" "DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%) DNA-directed RNA polymerase, alpha subunit (16.7%)" ETLLDAQAHPEKYPQLTIR Bacillati Bacteria Bacillati 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0005829 (50%) GO:0008861 (50%) cytosol (50%) formate C-acetyltransferase activity (50%) "IPR001150 (33.3%) IPR019777 (33.3%) IPR050244 (33.3%)" "Glycine radical domain (33.3%) Formate C-acetyltransferase glycine radical, conserved site (33.3%) Autonomous Glycyl Radical Cofactor (33.3%)" HASDDEPFSALAFK root "3.6.5.- (50%) 3.6.5.3 (50%)" "Acting on GTP; involved in cellular and subcellular movement (50%) protein-synthesizing GTPase (50%)" "GO:0032790 (17.2%) GO:0006412 (0.1%) GO:0006414 (0%)" "GO:0005737 (16.1%) GO:0005829 (0.1%)" "GO:0003746 (17.4%) GO:0005525 (17.2%) GO:0003924 (16.6%)" "ribosome disassembly (17.2%) translation (0.1%) translational elongation (0%)" "cytoplasm (16.1%) cytosol (0.1%)" "translation elongation factor activity (17.4%) GTP binding (17.2%) GTPase activity (16.6%)" "IPR009000 (6.5%) IPR027417 (6.4%) IPR041095 (6.3%)" "Translation protein, beta-barrel domain superfamily (6.5%) P-loop containing nucleoside triphosphate hydrolase (6.4%) Elongation Factor G, domain II (6.3%)" DVDTLGMADIEKK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "2.3.1.61 (99.8%) 2.3.1.- (0.2%)" "dihydrolipoyllysine-residue succinyltransferase (99.8%) Transferring groups other than amino-acyl groups (0.2%)" "GO:0006099 (20.1%) GO:0033512 (19.3%) GO:0006554 (0.5%)" "GO:0005829 (20.1%) GO:0045252 (19.8%) GO:0005737 (0%)" "GO:0004149 (20.1%) GO:0016746 (0.2%) GO:0031405 (0%)" "tricarboxylic acid cycle (20.1%) L-lysine catabolic process to acetyl-CoA via saccharopine (19.3%) lysine catabolic process (0.5%)" "cytosol (20.1%) oxoglutarate dehydrogenase complex (19.8%) cytoplasm (0%)" "dihydrolipoyllysine-residue succinyltransferase activity (20.1%) acyltransferase activity (0.2%) lipoic acid binding (0%)" "IPR001078 (11.4%) IPR023213 (11.4%) IPR050537 (11.4%)" "2-oxoacid dehydrogenase acyltransferase, catalytic domain (11.4%) Chloramphenicol acetyltransferase-like domain superfamily (11.4%) 2-oxoacid dehydrogenase (11.4%)" GTHFNPVDLVCAVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016020 (7.7%) GO:0016301 (92.3%) membrane (7.7%) kinase activity (92.3%) "IPR025393 (50.1%) IPR029044 (49.9%)" "Domain of unknown function DUF4301 (50.1%) Nucleotide-diphospho-sugar transferases (49.9%)" DKLVDAINTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" ITESTTLIDR Pseudomonadati Bacteria Pseudomonadati 2.3.1.251 (100%) lipid IVA palmitoyltransferase (100%) "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" EAHDANIMFLIQQANLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (60%) IPR019734 (37.1%) IPR036737 (2.9%)" "Tetratricopeptide-like helical domain superfamily (60%) Tetratricopeptide repeat (37.1%) OmpA-like domain superfamily (2.9%)" LMDDTIAQVQTSGEAEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006865 (32.5%) GO:0015813 (0.3%) GO:0070778 (0.3%)" "GO:0005576 (32.5%) GO:0030288 (32.5%) GO:0016020 (0.3%)" "GO:0016595 (0.3%) GO:0070335 (0.3%)" "amino acid transport (32.5%) L-glutamate transmembrane transport (0.3%) L-aspartate transmembrane transport (0.3%)" "extracellular region (32.5%) outer membrane-bounded periplasmic space (32.5%) membrane (0.3%)" "glutamate binding (0.3%) aspartate binding (0.3%)" "IPR001638 (50%) IPR051455 (50%)" "Solute-binding protein family 3/N-terminal domain of MltF (50%) Bacterial solute-binding protein 3 (50%)" MAEQIIGIRPSYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (17.7%) "GO:0016746 (17.7%) GO:0046872 (17.7%) GO:0051287 (17.7%)" malate metabolic process (17.7%) "acyltransferase activity (17.7%) metal ion binding (17.7%) NAD binding (17.7%)" "IPR002505 (9.1%) IPR012188 (9.1%) IPR012301 (9.1%)" "Phosphate acetyl/butaryl transferase (9.1%) NAD(P)-dependent malic enzyme (9.1%) Malic enzyme, N-terminal domain (9.1%)" HPSEFTQIGADIEVQVLEIDKENRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.8%) "GO:0022627 (24.2%) GO:0005840 (0.6%) GO:1990904 (0.6%)" "GO:0003729 (24.8%) GO:0003735 (24.8%) GO:0004654 (0.3%)" translation (24.8%) "cytosolic small ribosomal subunit (24.2%) ribosome (0.6%) ribonucleoprotein complex (0.6%)" "mRNA binding (24.8%) structural constituent of ribosome (24.8%) polyribonucleotide nucleotidyltransferase activity (0.3%)" "IPR003029 (24.9%) IPR012340 (24.9%) IPR035104 (24.9%)" "S1 domain (24.9%) Nucleic acid-binding, OB-fold (24.9%) Ribosomal protein S1-like (24.9%)" FHASVNLSILK Bacteria Bacteria "1.4.1.4 (85.7%) 1.4.1.2 (10.7%) 1.4.1.3 (3.6%)" "glutamate dehydrogenase (NADP(+)) (85.7%) glutamate dehydrogenase (10.7%) glutamate dehydrogenase [NAD(P)(+)] (3.6%)" GO:0006537 (25.5%) GO:0005829 (25.5%) "GO:0004354 (25.5%) GO:0000166 (23.1%) GO:0004352 (0.3%)" glutamate biosynthetic process (25.5%) cytosol (25.5%) "glutamate dehydrogenase (NADP+) activity (25.5%) nucleotide binding (23.1%) glutamate dehydrogenase (NAD+) activity (0.3%)" "IPR006097 (11.3%) IPR046346 (11.3%) IPR050724 (11.3%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.3%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.3%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.3%)" QLSTLGITPEEKGPYSAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.4.2 (100%) isochorismate synthase (100%) GO:0008909 (100%) isochorismate synthase activity (100%) "IPR004561 (33.3%) IPR005801 (33.3%) IPR015890 (33.3%)" "Isochorismate synthase (33.3%) ADC synthase (33.3%) Chorismate-utilising enzyme, C-terminal (33.3%)" DTLYSVIAHDLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.13.3 (100%) histidine kinase (100%) GO:0000155 (100%) phosphorelay sensor kinase activity (100%) "IPR001789 (14.3%) IPR003594 (14.3%) IPR003661 (14.3%)" "Signal transduction response regulator, receiver domain (14.3%) Histidine kinase/HSP90-like ATPase domain (14.3%) Signal transduction histidine kinase, dimerisation/phosphoacceptor domain (14.3%)" VNNANIEPVFFAYPDNAELDAIVKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR008323 (92.3%) IPR036086 (7.7%)" "Uncharacterised conserved protein UCP033563 (92.3%) ParB/Sulfiredoxin superfamily (7.7%)" SAAFESMCPGNAPSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.6.99.1 (100%) NADPH dehydrogenase (100%) "GO:0010181 (50%) GO:0016491 (45.3%) GO:0003959 (4.7%)" "FMN binding (50%) oxidoreductase activity (45.3%) NADPH dehydrogenase activity (4.7%)" "IPR001155 (33.7%) IPR051799 (33.7%) IPR013785 (32.6%)" "NADH:flavin oxidoreductase/NADH oxidase, N-terminal (33.7%) NADH-dependent flavin oxidoreductase (33.7%) Aldolase-type TIM barrel (32.6%)" HLESVVTNK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales IPR020911 (100%) Uncharacterised protein family UPF0325 (100%) TGDKGTTGLIGGTR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.5.1.17 (100%) corrinoid adenosyltransferase (100%) GO:0009236 (33.3%) "GO:0005524 (33.3%) GO:0008817 (33.3%)" cobalamin biosynthetic process (33.3%) "ATP binding (33.3%) corrinoid adenosyltransferase activity (33.3%)" "IPR016030 (33.3%) IPR029499 (33.3%) IPR036451 (33.3%)" "Cobalamin adenosyltransferase-like (33.3%) Corrinoid adenosyltransferase, PduO-type (33.3%) Cobalamin adenosyltransferase-like superfamily (33.3%)" ALNDKGITDILVVDNLKDGTK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 5.1.3.20 (100%) ADP-glyceromanno-heptose 6-epimerase (100%) "GO:0097171 (22%) GO:0009244 (20.6%) GO:0005975 (5.2%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0008712 (26.2%) GO:0050661 (25.7%) GO:0016853 (0.3%)" "ADP-L-glycero-beta-D-manno-heptose biosynthetic process (22%) lipopolysaccharide core region biosynthetic process (20.6%) carbohydrate metabolic process (5.2%)" "cytosol (0%) membrane (0%)" "ADP-glyceromanno-heptose 6-epimerase activity (26.2%) NADP binding (25.7%) isomerase activity (0.3%)" "IPR036291 (33.7%) IPR001509 (33.6%) IPR011912 (32.7%)" "NAD(P)-binding domain superfamily (33.7%) NAD-dependent epimerase/dehydratase (33.6%) ADP-L-glycero-D-manno-heptose-6-epimerase (32.7%)" DADEYCNIVYNILNQHGVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (31.9%) GO:0051536 (1.4%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (31.9%) iron-sulfur cluster binding (1.4%)" "IPR003741 (14.6%) IPR004452 (14.6%) IPR017896 (14.6%)" "LUD domain (14.6%) L-lactate oxidation iron-sulfur protein LutB/LldF (14.6%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14.6%)" MLQDIATLTGGTVISEEIGMELEKATLEDLGQAKR root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (16.9%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (16.7%) GO:1990220 (0.1%) GO:0005829 (0%)" "GO:0140662 (16.9%) GO:0005524 (16.9%) GO:0016853 (16.8%)" "protein refolding (16.9%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (16.7%) GroEL-GroES complex (0.1%) cytosol (0%)" "ATP-dependent protein folding chaperone (16.9%) ATP binding (16.9%) isomerase activity (16.8%)" "IPR001844 (16.9%) IPR027409 (16.9%) IPR002423 (16.7%)" "Chaperonin Cpn60/GroEL (16.9%) GroEL-like apical domain superfamily (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%)" KLRDENSMLK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) GO:0000428 (17%) "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (15.6%)" DNA-templated transcription (17%) DNA-directed RNA polymerase complex (17%) "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (15.6%)" "IPR007081 (9.3%) IPR045867 (9.2%) IPR007083 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.3%) DNA-directed RNA polymerase, subunit beta-prime (9.2%) RNA polymerase Rpb1, domain 4 (9.1%)" TILKDGGVAIMSTGFGEGENRVTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0000917 (14.2%) GO:0043093 (13.6%) GO:0051258 (13.6%)" "GO:0005737 (14.5%) GO:0032153 (14.5%)" "GO:0003924 (14.5%) GO:0005525 (14.5%)" "division septum assembly (14.2%) FtsZ-dependent cytokinesis (13.6%) protein polymerization (13.6%)" "cytoplasm (14.5%) cell division site (14.5%)" "GTPase activity (14.5%) GTP binding (14.5%)" "IPR008280 (11.2%) IPR018316 (11.2%) IPR024757 (11.2%)" "Tubulin/FtsZ, C-terminal (11.2%) Tubulin/FtsZ, 2-layer sandwich domain (11.2%) Cell division protein FtsZ, C-terminal (11.2%)" SIEELTWHLIKEQLLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.4%) GO:0043335 (16.4%) GO:0051083 (16.4%)" "GO:0003755 (16.4%) GO:0043022 (16.4%) GO:0044183 (16.4%)" "protein transport (16.4%) protein unfolding (16.4%) 'de novo' cotranslational protein folding (16.4%)" "peptidyl-prolyl cis-trans isomerase activity (16.4%) ribosome binding (16.4%) protein folding chaperone (16.4%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" NLYEFLSADYKEPMNAFEKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" RMEDQGQFECLENELHGLTDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis KSGVLTGLPDAYGR root 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (31%) GO:0005975 (0.1%) GO:0044814 (0%)" "GO:0005829 (32.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0008861 (32.1%) GO:0016829 (4.2%) GO:0016746 (0.4%)" "glucose metabolic process (31%) carbohydrate metabolic process (0.1%) pyruvate fermentation via PFL (0%)" "cytosol (32.1%) cytoplasm (0%) plasma membrane (0%)" "formate C-acetyltransferase activity (32.1%) lyase activity (4.2%) acyltransferase activity (0.4%)" "IPR004184 (20.4%) IPR050244 (20.4%) IPR005949 (19.7%)" "Pyruvate formate lyase domain (20.4%) Autonomous Glycyl Radical Cofactor (20.4%) Formate acetyltransferase (19.7%)" FLSQPFFVAEVFTGSPGK root "7.1.2.2 (99.9%) 3.6.3.14 (0.1%) 7.2.2.1 (0%)" "H(+)-transporting two-sector ATPase (99.9%) Transferred entry: 7.1.2.2 (0.1%) Na(+)-transporting two-sector ATPase (0%)" "GO:0042776 (15.8%) GO:1902600 (0%) GO:0006754 (0%)" "GO:0045259 (17%) GO:0005739 (15.8%) GO:0009535 (15.4%)" "GO:0005524 (17%) GO:0046933 (17%) GO:0016787 (0.3%)" "proton motive force-driven mitochondrial ATP synthesis (15.8%) proton transmembrane transport (0%) ATP biosynthetic process (0%)" "proton-transporting ATP synthase complex (17%) mitochondrion (15.8%) chloroplast thylakoid membrane (15.4%)" "ATP binding (17%) proton-transporting ATP synthase activity, rotational mechanism (17%) hydrolase activity (0.3%)" "IPR050053 (10.2%) IPR055190 (10.2%) IPR000194 (10.1%)" "ATPase alpha/beta chains (10.2%) ATP synthase A/B type, C-terminal domain (10.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%)" NYNSVIPQNNPHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.7 (100%) DNA-directed DNA polymerase (100%) GO:0006271 (16.7%) "GO:0005737 (16.7%) GO:0009360 (16.7%)" "GO:0003677 (16.7%) GO:0003887 (16.7%) GO:0008408 (16.7%)" DNA strand elongation involved in DNA replication (16.7%) "cytoplasm (16.7%) DNA polymerase III complex (16.7%)" "DNA binding (16.7%) DNA-directed DNA polymerase activity (16.7%) 3'-5' exonuclease activity (16.7%)" "IPR001001 (20.2%) IPR022635 (20.2%) IPR046938 (20.2%)" "DNA polymerase III, beta sliding clamp (20.2%) DNA polymerase III, beta sliding clamp, C-terminal (20.2%) DNA clamp superfamily (20.2%)" NDLYSSEHGIGGIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR027304 (33.3%) IPR046357 (33.3%) IPR052029 (33.3%)" "Trigger factor/SurA domain superfamily (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) Periplasmic chaperone PpiD (33.3%)" AVIKPIEGTILTVVR Bacillati Bacteria Bacillati 2.7.-.- (100%) Transferring phosphorus-containing groups (100%) GO:0006071 (50%) GO:0004371 (50%) glycerol metabolic process (50%) glycerone kinase activity (50%) "IPR004007 (16.8%) IPR036117 (16.8%) IPR050270 (16.8%)" "DhaL domain (16.8%) DhaL domain superfamily (16.8%) DegV domain-containing (16.8%)" GIHVFHLNIGQPDLPTPQAAIDAIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.6.1.- (50%) 2.6.1.1 (50%)" "Transaminases (50%) aspartate transaminase (50%)" GO:0006520 (33.3%) "GO:0030170 (33.3%) GO:0008483 (28.9%) GO:0004069 (4.4%)" amino acid metabolic process (33.3%) "pyridoxal phosphate binding (33.3%) transaminase activity (28.9%) L-aspartate:2-oxoglutarate aminotransferase activity (4.4%)" "IPR004839 (20%) IPR015421 (20%) IPR015422 (20%)" "Aminotransferase, class I/classII, large domain (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" KLADSGLNIIAAK root 6.2.1.5 (100%) succinate--CoA ligase (ADP-forming) (100%) "GO:0006099 (13.8%) GO:0006104 (13.7%) GO:0006086 (0%)" "GO:0005829 (13.7%) GO:0042709 (13.7%) GO:0009361 (0%)" "GO:0004775 (13.9%) GO:0005524 (13.1%) GO:0000287 (13%)" "tricarboxylic acid cycle (13.8%) succinyl-CoA metabolic process (13.7%) pyruvate decarboxylation to acetyl-CoA (0%)" "cytosol (13.7%) succinate-CoA ligase complex (13.7%) succinate-CoA ligase complex (ADP-forming) (0%)" "succinate-CoA ligase (ADP-forming) activity (13.9%) ATP binding (13.1%) magnesium ion binding (13%)" "IPR016102 (14.8%) IPR005811 (14.7%) IPR017866 (14.4%)" "Succinyl-CoA synthetase-like (14.8%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.7%) Succinyl-CoA synthetase, beta subunit, conserved site (14.4%)" HAECSVLVVR Bacteria Bacteria "GO:0001666 (25.7%) GO:0006950 (2.9%) GO:0007155 (2.9%)" "GO:0005737 (17.1%) GO:0005886 (2.9%)" "GO:0005524 (40%) GO:0008859 (2.9%) GO:0016787 (2.9%)" "response to hypoxia (25.7%) response to stress (2.9%) cell adhesion (2.9%)" "cytoplasm (17.1%) plasma membrane (2.9%)" "ATP binding (40%) exoribonuclease II activity (2.9%) hydrolase activity (2.9%)" "IPR014729 (33.3%) IPR006016 (33.2%) IPR006015 (33%)" "Rossmann-like alpha/beta/alpha sandwich fold (33.3%) UspA (33.2%) Universal stress protein A family (33%)" SIGPYSLITQQPLGGK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.9%) GO:0006508 (0.1%)" "GO:0000428 (19.9%) GO:0016020 (0%) GO:0031981 (0%)" "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (19.9%)" "DNA-templated transcription (19.9%) proteolysis (0.1%)" "DNA-directed RNA polymerase complex (19.9%) membrane (0%) nuclear lumen (0%)" "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (19.9%)" "IPR007120 (8%) IPR015712 (8%) IPR037033 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (8%) DNA-directed RNA polymerase, subunit 2 (8%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily (7.9%)" VLEEGLPQMDFNMAEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR005184 (33.3%) IPR038670 (33.3%) IPR053147 (33.3%)" "Domain of unknown function DUF306, Meta/HslJ (33.3%) HslJ-like superfamily (33.3%) Heat shock protein HslJ-like (33.3%)" VMDIINIVFK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004829 (16.7%) GO:0005524 (16.7%)" threonyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) threonine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002314 (7.8%) IPR002320 (7.8%) IPR004154 (7.8%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.8%) Threonine-tRNA ligase, class IIa (7.8%) Anticodon-binding (7.8%)" AVDKILNDIKRPFTAIMGGSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" RVTCYPSFEQYLDGADCTNEPVVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006508 (5.9%) GO:0005737 (88.2%) GO:0008233 (5.9%) proteolysis (5.9%) cytoplasm (88.2%) peptidase activity (5.9%) "IPR002818 (25%) IPR006287 (25%) IPR029062 (25%)" "DJ-1/PfpI (25%) Protein/nucleic acid deglycase DJ-1 (25%) Class I glutamine amidotransferase-like (25%)" IVPNHFLLVPGIGAQGGSLEEVCK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.23 (100%) orotidine-5'-phosphate decarboxylase (100%) "GO:0006207 (33%) GO:0044205 (33%)" "GO:0004590 (33%) GO:0016829 (1.1%)" "'de novo' pyrimidine nucleobase biosynthetic process (33%) 'de novo' UMP biosynthetic process (33%)" "orotidine-5'-phosphate decarboxylase activity (33%) lyase activity (1.1%)" "IPR001754 (25%) IPR011060 (25%) IPR011995 (25%)" "Orotidine 5'-phosphate decarboxylase domain (25%) Ribulose-phosphate binding barrel (25%) Orotidine 5'-phosphate decarboxylase, type 2 (25%)" SCGVFSSIHEQSGDINRGVER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.5.1.6 (100%) methionine adenosyltransferase (100%) "GO:0006556 (16.9%) GO:0006730 (16.2%)" GO:0005737 (16.2%) "GO:0004478 (16.9%) GO:0005524 (16.9%) GO:0000287 (16.2%)" "S-adenosylmethionine biosynthetic process (16.9%) one-carbon metabolic process (16.2%)" cytoplasm (16.2%) "methionine adenosyltransferase activity (16.9%) ATP binding (16.9%) magnesium ion binding (16.2%)" "IPR002133 (16.8%) IPR022628 (16.8%) IPR022629 (16.8%)" "S-adenosylmethionine synthetase (16.8%) S-adenosylmethionine synthetase, N-terminal (16.8%) S-adenosylmethionine synthetase, central domain (16.8%)" KNNEIPAVLYGGEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" NTHPLYQDYDIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.13.11.24 (100%) quercetin 2,3-dioxygenase (100%) "GO:0046872 (92.3%) GO:0008127 (7.7%)" "metal ion binding (92.3%) quercetin 2,3-dioxygenase activity (7.7%)" "IPR003829 (20%) IPR011051 (20%) IPR012093 (20%)" "Pirin, N-terminal domain (20%) RmlC-like cupin domain superfamily (20%) Pirin (20%)" EMFLDHVDIDKQNIFTPDGTIAKDTIFEYCR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (30.8%) GO:0006044 (30.8%)" "GO:0004342 (30.8%) GO:0016853 (7.7%)" "carbohydrate metabolic process (30.8%) N-acetylglucosamine metabolic process (30.8%)" "glucosamine-6-phosphate deaminase activity (30.8%) isomerase activity (7.7%)" "IPR003737 (14.3%) IPR004547 (14.3%) IPR006148 (14.3%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.3%) Glucosamine-6-phosphate isomerase (14.3%) Glucosamine/galactosamine-6-phosphate isomerase (14.3%)" VMSGENIGTLVHN Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.4.22 (100%) UMP kinase (100%) "GO:0006225 (20%) GO:0044210 (20%)" GO:0005737 (20%) "GO:0005524 (20%) GO:0033862 (20%)" "UDP biosynthetic process (20%) 'de novo' CTP biosynthetic process (20%)" cytoplasm (20%) "ATP binding (20%) UMP kinase activity (20%)" "IPR001048 (25%) IPR011817 (25%) IPR015963 (25%)" "Aspartate/glutamate/uridylate kinase (25%) Uridylate kinase (25%) Uridylate kinase, bacteria (25%)" HGTVMIDNSSAFR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000534 (20%) IPR005986 (20%) IPR012080 (20%)" "Semialdehyde dehydrogenase, NAD-binding (20%) Aspartate-semialdehyde dehydrogenase, beta-type (20%) Aspartate-semialdehyde dehydrogenase (20%)" DANPGVDFMPLQVEYKEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8.2%) IPR003029 (8.2%) IPR004087 (8.2%)" "Exoribonuclease, phosphorolytic domain 1 (8.2%) S1 domain (8.2%) K Homology domain (8.2%)" MGSEVFHHLAK root "4.2.1.11 (99.8%) 6.3.4.2 (0.2%)" "phosphopyruvate hydratase (99.8%) CTP synthase (glutamine hydrolyzing) (0.2%)" "GO:0006096 (16.7%) GO:0006396 (0%) GO:0006401 (0%)" "GO:0005576 (16.7%) GO:0000015 (16.7%) GO:0009986 (15.9%)" "GO:0004634 (16.7%) GO:0000287 (16.7%) GO:0016829 (0.1%)" "glycolytic process (16.7%) RNA processing (0%) RNA catabolic process (0%)" "extracellular region (16.7%) phosphopyruvate hydratase complex (16.7%) cell surface (15.9%)" "phosphopyruvate hydratase activity (16.7%) magnesium ion binding (16.7%) lyase activity (0.1%)" "IPR020810 (16.8%) IPR036849 (16.8%) IPR000941 (16.8%)" "Enolase, C-terminal TIM barrel domain (16.8%) Enolase-like, C-terminal domain superfamily (16.8%) Enolase (16.8%)" EGVEKGNEEAGR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae GINSLLDNVQGKPEENLIETVAIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.13.1 (100%) exoribonuclease II (100%) GO:0006402 (25%) GO:0005829 (25%) "GO:0003723 (25%) GO:0008859 (25%)" mRNA catabolic process (25%) cytosol (25%) "RNA binding (25%) exoribonuclease II activity (25%)" "IPR001900 (11.1%) IPR003029 (11.1%) IPR004476 (11.1%)" "Ribonuclease II/R (11.1%) S1 domain (11.1%) Ribonuclease II/ribonuclease R (11.1%)" LHYIAEWWK root 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20.1%) IPR018189 (20.1%) IPR046348 (20.1%)" "Phosphoglucose isomerase (PGI) (20.1%) Phosphoglucose isomerase, conserved site (20.1%) SIS domain superfamily (20.1%)" IGWKPGDQLLEESVPYNEEQDIAFYIDKPTAYTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005829 (100%) cytosol (100%) "IPR004375 (50%) IPR037012 (50%)" "NanQ anomerase/TabA/YiaL family (50%) NanQ anomerase/TabA/YiaL superfamily (50%)" YWAVPGTEGFMHR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.2.-.- (100%) Acting on the aldehyde or oxo group of donors (100%) GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.6%) IPR002880 (12.6%) IPR009014 (12.6%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.6%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.6%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.6%)" EEESGMVTGPVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" NLPQWHIPIELRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.99.5 (93.9%) 2.5.1.54 (6.1%)" "chorismate mutase (93.9%) 3-deoxy-7-phosphoheptulonate synthase (6.1%)" GO:0046417 (45.7%) "GO:0004106 (45.7%) GO:0003849 (8.5%)" chorismate metabolic process (45.7%) "chorismate mutase activity (45.7%) 3-deoxy-7-phosphoheptulonate synthase activity (8.5%)" "IPR006218 (16.7%) IPR013785 (16.7%) IPR052899 (16.7%)" "DAHP synthetase I/KDSA (16.7%) Aldolase-type TIM barrel (16.7%) Class-I DAHP synthase (16.7%)" RRPGQSVITTSR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.3.5 (100%) chorismate synthase (100%) "GO:0008652 (16.7%) GO:0009073 (16.7%) GO:0009423 (16.7%)" GO:0005829 (16.7%) "GO:0004107 (16.7%) GO:0010181 (16.7%)" "amino acid biosynthetic process (16.7%) aromatic amino acid family biosynthetic process (16.7%) chorismate biosynthetic process (16.7%)" cytosol (16.7%) "chorismate synthase activity (16.7%) FMN binding (16.7%)" "IPR000453 (33.3%) IPR020541 (33.3%) IPR035904 (33.3%)" "Chorismate synthase (33.3%) Chorismate synthase, conserved site (33.3%) Chorismate synthase AroC superfamily (33.3%)" NIGIMAHIDAGKTTTSER root "GO:0032790 (20.1%) GO:0006412 (0.3%) GO:0070125 (0.1%)" "GO:0005737 (18.5%) GO:0005739 (0.1%) GO:0005759 (0.1%)" "GO:0003924 (20.1%) GO:0005525 (20.1%) GO:0003746 (19.8%)" "ribosome disassembly (20.1%) translation (0.3%) mitochondrial translational elongation (0.1%)" "cytoplasm (18.5%) mitochondrion (0.1%) mitochondrial matrix (0.1%)" "GTPase activity (20.1%) GTP binding (20.1%) translation elongation factor activity (19.8%)" "IPR000795 (6.4%) IPR027417 (6.4%) IPR031157 (6.4%)" "Translational (tr)-type GTP-binding domain (6.4%) P-loop containing nucleoside triphosphate hydrolase (6.4%) Tr-type G domain, conserved site (6.4%)" YTDNYIMQISGSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004839 (25%) IPR015421 (25%) IPR015424 (25%)" "Aminotransferase, class I/classII, large domain (25%) Pyridoxal phosphate-dependent transferase, major domain (25%) Pyridoxal phosphate-dependent transferase (25%)" SSVDKFYTQEVLQQLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.12 (100%) aspartate--tRNA ligase (100%) GO:0006422 (19.8%) GO:0005737 (19.8%) "GO:0003676 (19.8%) GO:0004815 (19.8%) GO:0005524 (19.8%)" aspartyl-tRNA aminoacylation (19.8%) cytoplasm (19.8%) "nucleic acid binding (19.8%) aspartate-tRNA ligase activity (19.8%) ATP binding (19.8%)" "IPR002312 (9.1%) IPR004115 (9.1%) IPR004364 (9.1%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.1%) GAD-like domain superfamily (9.1%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.1%)" ERLDRGEDLPQYIKDHPIYYAGPAK Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) GO:0005829 (0.1%) "GO:0004333 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (0.1%) "fumarate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR004647 (16.7%) IPR036660 (16.7%) IPR051208 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (16.7%) Class-I Fumarase/Tartrate Dehydratase (16.7%)" AGTYVSNGKFDHIMMAWETSITK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (34.3%) "GO:0016615 (31.4%) GO:0016616 (31.4%) GO:0030060 (2.9%)" malate metabolic process (34.3%) "malate dehydrogenase activity (31.4%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (31.4%) L-malate dehydrogenase (NAD+) activity (2.9%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" SALFVVDVMKEHIAVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" DANDTGSTEVQVALLTAQINHLQGHFAEHK root "GO:0006412 (24.2%) GO:0000028 (0.5%) GO:0002181 (0.3%)" "GO:0022627 (24.2%) GO:0005840 (1.9%) GO:0005737 (0.3%)" "GO:0003735 (24.2%) GO:0019843 (23.6%) GO:0070181 (0.3%)" "translation (24.2%) ribosomal small subunit assembly (0.5%) cytoplasmic translation (0.3%)" "cytosolic small ribosomal subunit (24.2%) ribosome (1.9%) cytoplasm (0.3%)" "structural constituent of ribosome (24.2%) rRNA binding (23.6%) small ribosomal subunit rRNA binding (0.3%)" "IPR000589 (33.3%) IPR005290 (33.3%) IPR009068 (33.3%)" "Small ribosomal subunit protein uS15 (33.3%) Small ribosomal subunit protein uS15, bacteria (33.3%) uS15/NS1, RNA-binding domain superfamily (33.3%)" TYNGEVVDKILQVTNDDAIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.5.1.47 (100%) cysteine synthase (100%) GO:0006535 (50%) GO:0004124 (50%) cysteine biosynthetic process from serine (50%) cysteine synthase activity (50%) "IPR001216 (16.7%) IPR001926 (16.7%) IPR005856 (16.7%)" "Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site (16.7%) Tryptophan synthase beta chain-like, PALP domain (16.7%) Cysteine synthase (16.7%)" AGHLWGDAAAAFFISK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) "GO:0006633 (31%) GO:0044550 (31%)" "GO:0004315 (31%) GO:0033818 (7%)" "fatty acid biosynthetic process (31%) secondary metabolite biosynthetic process (31%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (31%) beta-ketoacyl-acyl-carrier-protein synthase III activity (7%)" "IPR013747 (33.3%) IPR013751 (33.3%) IPR016039 (33.3%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (33.3%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (33.3%) Thiolase-like (33.3%)" ILFAENPGILVQVK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" EIEAAVAAGNPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" KAVEAFVDTVSNELKEGGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" AMSDAGLSNSDIDEVILVGGSSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0042026 (0.5%) GO:0051085 (0.5%)" "GO:0005524 (32.7%) GO:0140662 (32.7%) GO:0051082 (32.1%)" "protein refolding (0.5%) obsolete chaperone cofactor-dependent protein refolding (0.5%)" "ATP binding (32.7%) ATP-dependent protein folding chaperone (32.7%) unfolded protein binding (32.1%)" "IPR013126 (16.7%) IPR018181 (16.7%) IPR029047 (16.7%)" "Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%) Heat shock protein 70kD, peptide-binding domain superfamily (16.7%)" KIDGISYVNDESDREGMR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (12.9%) GO:0006261 (11.2%)" "GO:0005737 (12.9%) GO:0009330 (12.9%) GO:0005694 (11.6%)" "GO:0003677 (12.9%) GO:0005524 (12.9%) GO:0034335 (11.2%)" "DNA topological change (12.9%) DNA-templated DNA replication (11.2%)" "cytoplasm (12.9%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.9%) chromosome (11.6%)" "DNA binding (12.9%) ATP binding (12.9%) DNA negative supercoiling activity (11.2%)" "IPR002205 (12.9%) IPR006691 (12.9%) IPR050220 (12.9%)" "DNA topoisomerase, type IIA, domain A (12.9%) DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.9%) Type II DNA Topoisomerases (12.9%)" GVEIVEVEGPHPAANVGVQINHIKPVNKGEVVWTVNPADVIVIGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (20%) IPR011053 (20%) IPR022615 (20%)" "Na(+)-translocating NADH-quinone reductase subunit A (20%) Single hybrid motif (20%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (20%)" VSYPIYHIENIVKPVSK root 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.5%) GO:0005829 (17.5%) "GO:0004612 (17.5%) GO:0005524 (17.5%) GO:0046872 (17%)" gluconeogenesis (17.5%) cytosol (17.5%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.5%) ATP binding (17.5%) metal ion binding (17%)" "IPR001272 (25.2%) IPR013035 (25.2%) IPR015994 (24.8%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.2%) Phosphoenolpyruvate carboxykinase, C-terminal (25.2%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (24.8%)" HLLNYVNTLNKLIEGTKFENAPLEQIVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0004784 (50%) GO:0046872 (50%)" "superoxide dismutase activity (50%) metal ion binding (50%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" NIPNVIGFLGGSDTPVPLRPAEVNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006353 (20%) GO:0006354 (20%) GO:0031564 (20%)" GO:0005829 (20%) "DNA-templated transcription termination (20%) DNA-templated transcription elongation (20%) transcription antitermination (20%)" cytosol (20%) "IPR001062 (12.5%) IPR005824 (12.5%) IPR006645 (12.5%)" "Transcription antitermination protein, NusG (12.5%) KOW (12.5%) NusG-like, N-terminal (12.5%)" ELIDPKSIVVVGGSNNVHKPGGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (50%) GO:0003824 (40%) GO:0016874 (10%)" "ATP binding (50%) catalytic activity (40%) ligase activity (10%)" "IPR003781 (20%) IPR013815 (20%) IPR016102 (20%)" "CoA-binding (20%) ATP-grasp fold, subdomain 1 (20%) Succinyl-CoA synthetase-like (20%)" ISNVELSKR root "GO:0006524 (19.9%) GO:0043201 (19.9%) GO:0006355 (19.7%)" "GO:0005829 (20%) GO:0032993 (0%) GO:0005634 (0%)" "GO:0043565 (20%) GO:0000976 (0%) GO:0001216 (0%)" "alanine catabolic process (19.9%) response to L-leucine (19.9%) regulation of DNA-templated transcription (19.7%)" "cytosol (20%) protein-DNA complex (0%) nucleus (0%)" "sequence-specific DNA binding (20%) transcription cis-regulatory region binding (0%) DNA-binding transcription activator activity (0%)" "IPR000485 (12.6%) IPR036388 (12.6%) IPR036390 (12.6%)" "AsnC-type HTH domain (12.6%) Winged helix-like DNA-binding domain superfamily (12.6%) Winged helix DNA-binding domain superfamily (12.6%)" NVTTTEDIKNELAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR038179 (100%) NigD-like, N-terminal domain superfamily (100%) SDDEINEAFNSDPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" KHESGVVTDPQTVLPTTTLR root 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (20.9%) GO:0006177 (18.5%) GO:0009411 (0.1%)" "GO:0005737 (0.2%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0003938 (20.9%) GO:0046872 (19.8%) GO:0000166 (17.6%)" "GTP biosynthetic process (20.9%) GMP biosynthetic process (18.5%) response to UV (0.1%)" "cytoplasm (0.2%) cytosol (0.1%) plasma membrane (0.1%)" "IMP dehydrogenase activity (20.9%) metal ion binding (19.8%) nucleotide binding (17.6%)" "IPR001093 (17.1%) IPR005990 (17.1%) IPR013785 (17.1%)" "IMP dehydrogenase/GMP reductase (17.1%) Inosine-5'-monophosphate dehydrogenase (17.1%) Aldolase-type TIM barrel (17.1%)" HGASCPVGLGVSCSADR root 4.2.1.2 (100%) fumarate hydratase (100%) "GO:0006099 (19.9%) GO:0006106 (3.7%) GO:0006091 (0.6%)" "GO:0005829 (0.3%) GO:0016020 (0.2%) GO:0005737 (0%)" "GO:0051539 (20.7%) GO:0046872 (20.7%) GO:0004333 (19.4%)" "tricarboxylic acid cycle (19.9%) fumarate metabolic process (3.7%) generation of precursor metabolites and energy (0.6%)" "cytosol (0.3%) membrane (0.2%) cytoplasm (0%)" "4 iron, 4 sulfur cluster binding (20.7%) metal ion binding (20.7%) fumarate hydratase activity (19.4%)" "IPR004646 (17.9%) IPR051208 (17.9%) IPR004647 (17.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (17.9%) Class-I Fumarase/Tartrate Dehydratase (17.9%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (17.7%)" NFIFAHPSAPALDVATAIVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (25%) GO:0009898 (25%) "GO:0003842 (25%) GO:0004657 (25%)" L-proline catabolic process to L-glutamate (25%) cytoplasmic side of plasma membrane (25%) "L-glutamate gamma-semialdehyde dehydrogenase activity (25%) proline dehydrogenase activity (25%)" "IPR005931 (14.3%) IPR015590 (14.3%) IPR016160 (14.3%)" "Delta-1-pyrroline-5-carboxylate dehydrogenase (14.3%) Aldehyde dehydrogenase domain (14.3%) Aldehyde dehydrogenase, cysteine active site (14.3%)" GLPAFGIYGHDVQDLDDNTIPADVAEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR004216 (11.1%) IPR005763 (11.1%) IPR009015 (11.1%)" "L-fucose/L-arabinose isomerase, C-terminal (11.1%) L-fucose isomerase (11.1%) L-fucose isomerase, N-terminal/central domain superfamily (11.1%)" VGVENLVNAVPQLK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.5.1.1 (100%) asparaginase (100%) "GO:0006528 (31.1%) GO:0006520 (3%) GO:0006530 (0.2%)" "GO:0042597 (30%) GO:0030288 (0.2%) GO:0032991 (0.2%)" "GO:0004067 (34.3%) GO:0016787 (0.6%) GO:0042802 (0.2%)" "asparagine metabolic process (31.1%) amino acid metabolic process (3%) L-asparagine catabolic process (0.2%)" "periplasmic space (30%) outer membrane-bounded periplasmic space (0.2%) protein-containing complex (0.2%)" "asparaginase activity (34.3%) hydrolase activity (0.6%) identical protein binding (0.2%)" "IPR006034 (11.7%) IPR027474 (11.7%) IPR036152 (11.7%)" "Asparaginase/glutaminase-like (11.7%) L-asparaginase, N-terminal (11.7%) Asparaginase/glutaminase-like superfamily (11.7%)" LRADGMEQMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.2.14 (100%) amidophosphoribosyltransferase (100%) "GO:0009113 (20.3%) GO:0006189 (16.5%) GO:0006164 (3.8%)" "GO:0004044 (20.3%) GO:0046872 (19.6%) GO:0051536 (19.6%)" "purine nucleobase biosynthetic process (20.3%) 'de novo' IMP biosynthetic process (16.5%) purine nucleotide biosynthetic process (3.8%)" "amidophosphoribosyltransferase activity (20.3%) metal ion binding (19.6%) iron-sulfur cluster binding (19.6%)" "IPR000836 (20%) IPR005854 (20%) IPR017932 (20%)" "Phosphoribosyltransferase domain (20%) Amidophosphoribosyltransferase (20%) Glutamine amidotransferase type 2 domain (20%)" YLIELINSKADVDDIDHLSNR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (19.9%) GO:0000428 (20.1%) "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (19.9%)" DNA-templated transcription (19.9%) DNA-directed RNA polymerase complex (20.1%) "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (19.9%)" "IPR007642 (7.8%) IPR007645 (7.8%) IPR015712 (7.8%)" "RNA polymerase Rpb2, domain 2 (7.8%) RNA polymerase Rpb2, domain 3 (7.8%) DNA-directed RNA polymerase, subunit 2 (7.8%)" HYGDLQGLNKSETAAK Pseudomonadati Bacteria Pseudomonadati "5.4.2.11 (95.2%) 5.4.2.1 (4.8%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (95.2%) Transferred entry: 5.4.2.11 and 5.4.2.12 (4.8%)" "GO:0006094 (33.3%) GO:0006096 (33.3%)" GO:0004619 (33.3%) "gluconeogenesis (33.3%) glycolytic process (33.3%)" phosphoglycerate mutase activity (33.3%) "IPR001345 (25%) IPR005952 (25%) IPR013078 (25%)" "Phosphoglycerate/bisphosphoglycerate mutase, active site (25%) Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%)" EAIAKPTSAPSKPLKD Parabacteroides goldsteinii Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides goldsteinii "GO:0005886 (50%) GO:0045121 (50%)" "plasma membrane (50%) membrane raft (50%)" IPR022853 (100%) Flotillin-like protein FloA (100%) AKLDAAQAEQATAANTAGTQDNLA Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 3.1.11.6 (100%) exodeoxyribonuclease VII (100%) GO:0006308 (25%) "GO:0005829 (25%) GO:0009318 (25%)" GO:0008855 (25%) DNA catabolic process (25%) "cytosol (25%) exodeoxyribonuclease VII complex (25%)" exodeoxyribonuclease VII activity (25%) "IPR003761 (50%) IPR037004 (50%)" "Exonuclease VII, small subunit (50%) Exonuclease VII, small subunit superfamily (50%)" VNDSATTGTADRQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) IPR014941 (100%) Fimbrium subunit FimB/Mfa2/Mfa3 (100%) FILNEVSYFGPGAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.77 (100%) lactaldehyde reductase (100%) "GO:0004022 (39.3%) GO:0046872 (39.3%) GO:0008912 (21.4%)" "alcohol dehydrogenase (NAD+) activity (39.3%) metal ion binding (39.3%) lactaldehyde reductase activity (21.4%)" "IPR001670 (20%) IPR013460 (20%) IPR018211 (20%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (20%) Lactaldehyde reductase (20%) Alcohol dehydrogenase, iron-type, conserved site (20%)" IVPIQYPISCGSSFNAVVDVLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" HIGPETDVPAGDIGVGGR Bacteria Bacteria "1.4.1.4 (77.8%) 1.4.1.3 (22.2%)" "glutamate dehydrogenase (NADP(+)) (77.8%) glutamate dehydrogenase [NAD(P)(+)] (22.2%)" GO:0006537 (25.9%) GO:0005829 (25.9%) "GO:0004354 (25.9%) GO:0000166 (21.9%) GO:0004352 (0.3%)" glutamate biosynthetic process (25.9%) cytosol (25.9%) "glutamate dehydrogenase (NADP+) activity (25.9%) nucleotide binding (21.9%) glutamate dehydrogenase (NAD+) activity (0.3%)" "IPR006097 (11.3%) IPR046346 (11.3%) IPR050724 (11.3%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.3%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.3%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.3%)" DVHNSIGVVTALNPVIGYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.9%) GO:0006531 (24.9%)" GO:0005829 (24.9%) "GO:0008797 (24.9%) GO:0016853 (0.4%)" "tricarboxylic acid cycle (24.9%) aspartate metabolic process (24.9%)" cytosol (24.9%) "aspartate ammonia-lyase activity (24.9%) isomerase activity (0.4%)" "IPR008948 (13.7%) IPR018951 (13.7%) IPR051546 (13.7%)" "L-Aspartase-like (13.7%) Fumarase C, C-terminal (13.7%) Class-II Aspartate Ammonia-Lyase (13.7%)" SAPEVNMNLGLIALAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" GAFVSQVLPNSSAAK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "3.4.21.107 (99.3%) 3.4.21.- (0.7%)" "peptidase Do (99.3%) Serine endopeptidases (0.7%)" "GO:0051603 (19.9%) GO:0006515 (2.3%) GO:0006508 (2.1%)" "GO:0030313 (19.2%) GO:0042597 (15.2%) GO:0005886 (0.4%)" "GO:0004252 (22.2%) GO:0042802 (13.5%) GO:0008236 (1.3%)" "proteolysis involved in protein catabolic process (19.9%) protein quality control for misfolded or incompletely synthesized proteins (2.3%) proteolysis (2.1%)" "cell envelope (19.2%) periplasmic space (15.2%) plasma membrane (0.4%)" "serine-type endopeptidase activity (22.2%) identical protein binding (13.5%) serine-type peptidase activity (1.3%)" "IPR036034 (20.8%) IPR001478 (20.6%) IPR001940 (19.6%)" "PDZ superfamily (20.8%) PDZ domain (20.6%) Peptidase S1C (19.6%)" QSILQAIAEQSR root "2.7.7.6 (71.4%) 1.2.1.11 (14.3%) 2.7.7.8 (14.3%)" "DNA-directed RNA polymerase (71.4%) aspartate-semialdehyde dehydrogenase (14.3%) polyribonucleotide nucleotidyltransferase (14.3%)" "GO:0006352 (33.3%) GO:0005975 (0%) GO:0006355 (0%)" "GO:0000428 (0.1%) GO:0005829 (0%) GO:1903865 (0%)" "GO:0016987 (33.2%) GO:0003677 (32.9%) GO:0003700 (0.1%)" "DNA-templated transcription initiation (33.3%) carbohydrate metabolic process (0%) regulation of DNA-templated transcription (0%)" "DNA-directed RNA polymerase complex (0.1%) cytosol (0%) sigma factor antagonist complex (0%)" "sigma factor activity (33.2%) DNA binding (32.9%) DNA-binding transcription factor activity (0.1%)" "IPR050239 (10%) IPR014284 (10%) IPR007624 (10%)" "Sigma-70 factor family, RNA polymerase initiation factors (10%) RNA polymerase sigma-70-like domain (10%) RNA polymerase sigma-70 region 3 (10%)" AAASMHAQLSSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.1.13 (100%) glutamate synthase (NADPH) (100%) "GO:0051536 (50%) GO:0016491 (37.5%) GO:0004355 (12.5%)" "iron-sulfur cluster binding (50%) oxidoreductase activity (37.5%) glutamate synthase (NADPH) activity (12.5%)" "IPR001433 (10%) IPR006004 (10%) IPR009051 (10%)" "Oxidoreductase FAD/NAD(P)-binding (10%) Sulfide dehydrogenase subunit alpha-like (10%) Alpha-helical ferredoxin (10%)" GKGFQGVVK root "GO:0006412 (23.6%) GO:0000027 (0%) GO:0006364 (0%)" "GO:0022625 (16.9%) GO:0005840 (6.1%) GO:1990904 (6.1%)" "GO:0003735 (23.6%) GO:0019843 (22.9%) GO:0003723 (0.1%)" "translation (23.6%) ribosomal large subunit assembly (0%) rRNA processing (0%)" "cytosolic large ribosomal subunit (16.9%) ribosome (6.1%) ribonucleoprotein complex (6.1%)" "structural constituent of ribosome (23.6%) rRNA binding (22.9%) RNA binding (0.1%)" "IPR000597 (26.1%) IPR009000 (26.1%) IPR019927 (25.4%)" "Large ribosomal subunit protein uL3 (26.1%) Translation protein, beta-barrel domain superfamily (26.1%) Large ribosomal subunit protein uL3, bacteria/organella (25.4%)" DSAAIYQGQGR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0016884 (93.8%) GO:0016740 (6.3%)" "carbon-nitrogen ligase activity, with glutamine as amido-N-donor (93.8%) transferase activity (6.3%)" "IPR003789 (25%) IPR019004 (25%) IPR023168 (25%)" "Aspartyl/glutamyl-tRNA amidotransferase subunit B-like (25%) Uncharacterised protein YqeY/Aim41 (25%) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 (25%)" LGIPLEEQMALSGMAVDAVMDSVSVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0016226 (99.2%) GO:1990229 (0.8%) iron-sulfur cluster assembly (99.2%) iron-sulfur cluster assembly complex (0.8%) "IPR000825 (20%) IPR010231 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufB (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" CILNGLGKDAAQIISR Bacteria Bacteria IPR025964 (100%) GGGtGRT protein (100%) KIEHNVLNAK Bacteria Bacteria 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (10.5%) GO:0008564 (0.3%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (10.5%) protein-exporting ATPase activity (0.3%)" "IPR000185 (7.9%) IPR011115 (7.9%) IPR011130 (7.9%)" "Protein translocase subunit SecA (7.9%) SecA DEAD-like, N-terminal (7.9%) SecA, preprotein cross-linking domain (7.9%)" KGPNHGPAPIPEEGKWVK Bacteria Bacteria "GO:0006879 (14.3%) GO:0016226 (14.3%)" GO:0005737 (14.3%) "GO:0005506 (14.3%) GO:0008198 (14.3%) GO:0051536 (14.3%)" "intracellular iron ion homeostasis (14.3%) iron-sulfur cluster assembly (14.3%)" cytoplasm (14.3%) "iron ion binding (14.3%) ferrous iron binding (14.3%) iron-sulfur cluster binding (14.3%)" IPR002871 (100%) NIF system FeS cluster assembly, NifU, N-terminal (100%) NVILLIPDGTSLATISIAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50%) GO:0046872 (50%)" "alkaline phosphatase activity (50%) metal ion binding (50%)" "IPR001952 (50%) IPR017850 (50%)" "Alkaline phosphatase (50%) Alkaline-phosphatase-like, core domain superfamily (50%)" VVQFGNSIEFCGGTHVPATGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR002318 (9.3%) IPR003156 (9.3%) IPR012947 (9.3%)" "Alanine-tRNA ligase, class IIc (9.3%) DHHA1 domain (9.3%) Threonyl/alanyl tRNA synthetase, SAD (9.3%)" AGANGNPASLESFQTPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) "GO:0004553 (43.9%) GO:0004565 (6.1%)" carbohydrate metabolic process (50%) "hydrolase activity, hydrolyzing O-glycosyl compounds (43.9%) beta-galactosidase activity (6.1%)" "IPR006101 (7.7%) IPR006102 (7.7%) IPR006103 (7.7%)" "Glycoside hydrolase, family 2 (7.7%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.7%) Glycoside hydrolase family 2, catalytic domain (7.7%)" MLEDQNLISAHGK root "GO:0045893 (16.4%) GO:0006355 (0.1%) GO:0006351 (0%)" "GO:0005829 (16.6%) GO:0032993 (16.4%)" "GO:0003700 (16.8%) GO:0030552 (16.6%) GO:0043565 (16.3%)" "positive regulation of DNA-templated transcription (16.4%) regulation of DNA-templated transcription (0.1%) DNA-templated transcription (0%)" "cytosol (16.6%) protein-DNA complex (16.4%)" "DNA-binding transcription factor activity (16.8%) cAMP binding (16.6%) sequence-specific DNA binding (16.3%)" "IPR012318 (11.2%) IPR036388 (11.2%) IPR036390 (11.2%)" "Crp-type HTH domain (11.2%) Winged helix-like DNA-binding domain superfamily (11.2%) Winged helix DNA-binding domain superfamily (11.2%)" EITPANADTVTR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.3.1.117 (100%) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (100%) "GO:0009089 (19.7%) GO:0019877 (19.7%) GO:0009085 (0.1%)" "GO:0005737 (19.3%) GO:0005829 (0.1%)" "GO:0008666 (21%) GO:0016779 (19.4%) GO:0016746 (0.6%)" "lysine biosynthetic process via diaminopimelate (19.7%) diaminopimelate biosynthetic process (19.7%) lysine biosynthetic process (0.1%)" "cytoplasm (19.3%) cytosol (0.1%)" "2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity (21%) nucleotidyltransferase activity (19.4%) acyltransferase activity (0.6%)" "IPR037133 (17.3%) IPR023180 (17.2%) IPR011004 (17%)" "Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily (17.3%) Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 (17.2%) Trimeric LpxA-like superfamily (17%)" SLIVEQLTADEPITPEAVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis HYGALQGLNKAETAEK root "5.4.2.11 (99.2%) 5.4.2.- (0.3%) 5.4.2.1 (0.3%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (99.2%) Phosphotransferases (phosphomutases) (0.3%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.3%)" "GO:0006096 (33.4%) GO:0006094 (32.6%) GO:0061621 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004619 (32.9%) GO:0016868 (0.5%) GO:0016853 (0.3%)" "glycolytic process (33.4%) gluconeogenesis (32.6%) canonical glycolysis (0%)" "cytoplasm (0%) cytosol (0%)" "phosphoglycerate mutase activity (32.9%) intramolecular phosphotransferase activity (0.5%) isomerase activity (0.3%)" "IPR005952 (25.4%) IPR013078 (25.3%) IPR029033 (25.3%)" "Phosphoglycerate mutase 1 (25.4%) Histidine phosphatase superfamily, clade-1 (25.3%) Histidine phosphatase superfamily (25.3%)" LIKPLLGTLEYGLPHK root 1.1.1.17 (100%) mannitol-1-phosphate 5-dehydrogenase (100%) GO:0019592 (33.2%) GO:0005829 (33.2%) "GO:0008926 (33.2%) GO:0016491 (0.4%)" mannitol catabolic process (33.2%) cytosol (33.2%) "mannitol-1-phosphate 5-dehydrogenase activity (33.2%) oxidoreductase activity (0.4%)" "IPR008927 (13%) IPR013118 (13%) IPR013328 (13%)" "6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (13%) Mannitol dehydrogenase, C-terminal (13%) 6-phosphogluconate dehydrogenase, domain 2 (13%)" ASGTNDKAGGPLNLIR root 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (27.6%) "GO:0009898 (27.1%) GO:0005759 (0.5%)" "GO:0003842 (27.6%) GO:0004657 (17.1%)" L-proline catabolic process to L-glutamate (27.6%) "cytoplasmic side of plasma membrane (27.1%) mitochondrial matrix (0.5%)" "L-glutamate gamma-semialdehyde dehydrogenase activity (27.6%) proline dehydrogenase activity (17.1%)" "IPR015590 (14.5%) IPR016161 (14.5%) IPR016162 (14.5%)" "Aldehyde dehydrogenase domain (14.5%) Aldehyde/histidinol dehydrogenase (14.5%) Aldehyde dehydrogenase, N-terminal (14.5%)" HYPGDGVVTGCGTIEGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.-.-.- (100%) Ligases (100%) GO:0015977 (22%) GO:0009317 (22%) "GO:0003989 (22%) GO:0004658 (22%) GO:0016740 (11%)" carbon fixation (22%) acetyl-CoA carboxylase complex (22%) "acetyl-CoA carboxylase activity (22%) propionyl-CoA carboxylase activity (22%) transferase activity (11%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" LGHMVDDKMHAR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.9%) GO:0006508 (0.2%)" "GO:0000428 (19.9%) GO:0031981 (0%)" "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (19.9%)" "DNA-templated transcription (19.9%) proteolysis (0.2%)" "DNA-directed RNA polymerase complex (19.9%) nuclear lumen (0%)" "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (19.9%)" "IPR007120 (7.9%) IPR007641 (7.9%) IPR015712 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) RNA polymerase Rpb2, domain 7 (7.9%) DNA-directed RNA polymerase, subunit 2 (7.9%)" AIATEAAQNTLATVNKDILIDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" YGGFYLGSIGGPAAILAQNNIK root 4.2.1.2 (100%) fumarate hydratase (100%) "GO:0006099 (19.2%) GO:0006091 (0.8%) GO:0006106 (0.6%)" GO:0005829 (0.2%) "GO:0004333 (19.9%) GO:0046872 (19.9%) GO:0051539 (19.9%)" "tricarboxylic acid cycle (19.2%) generation of precursor metabolites and energy (0.8%) fumarate metabolic process (0.6%)" cytosol (0.2%) "fumarate hydratase activity (19.9%) metal ion binding (19.9%) 4 iron, 4 sulfur cluster binding (19.9%)" "IPR004647 (16.9%) IPR036660 (16.9%) IPR051208 (16.9%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.9%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (16.9%) Class-I Fumarase/Tartrate Dehydratase (16.9%)" TLFLQYPACSTCQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.20.4.1 (100%) arsenate reductase (glutathione/glutaredoxin) (100%) "GO:0008794 (50%) GO:0016491 (50%)" "arsenate reductase (glutaredoxin) activity (50%) oxidoreductase activity (50%)" "IPR006504 (33.3%) IPR006660 (33.3%) IPR036249 (33.3%)" "Transcriptional regulator Spx/MgsR (33.3%) Arsenate reductase-like (33.3%) Thioredoxin-like superfamily (33.3%)" AMDIHAASPHFQAFGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.-.-.- (100%) Oxidoreductases (100%) "GO:0004497 (64.3%) GO:0003824 (35.7%)" "monooxygenase activity (64.3%) catalytic activity (35.7%)" "IPR007138 (33.3%) IPR011008 (33.3%) IPR050744 (33.3%)" "Antibiotic biosynthesis monooxygenase domain (33.3%) Dimeric alpha-beta barrel (33.3%) AI-2 Signaling Cycle Isomerase LsrG (33.3%)" SALLVLEDGTQFHGR root "6.3.5.5 (99.9%) 6.3.4.16 (0.1%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (99.9%) carbamoyl-phosphate synthase (ammonia) (0.1%)" "GO:0006526 (15.5%) GO:0006207 (15.4%) GO:0006541 (15.4%)" "GO:0005951 (0.2%) GO:0005737 (0%) GO:0005829 (0%)" "GO:0004088 (15.8%) GO:0005524 (15.8%) GO:0004359 (5.3%)" "L-arginine biosynthetic process (15.5%) 'de novo' pyrimidine nucleobase biosynthetic process (15.4%) glutamine metabolic process (15.4%)" "carbamoyl-phosphate synthase complex (0.2%) cytoplasm (0%) cytosol (0%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (15.8%) ATP binding (15.8%) glutaminase activity (5.3%)" "IPR036480 (14.6%) IPR002474 (14.6%) IPR029062 (14.2%)" "Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily (14.6%) Carbamoyl-phosphate synthase small subunit, N-terminal domain (14.6%) Class I glutamine amidotransferase-like (14.2%)" IVNEPTAAALAYGLDKAHK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0042026 (0.3%) GO:0051085 (0.3%)" GO:0005737 (1.5%) "GO:0005524 (32.4%) GO:0051082 (32.4%) GO:0140662 (32.4%)" "protein refolding (0.3%) obsolete chaperone cofactor-dependent protein refolding (0.3%)" cytoplasm (1.5%) "ATP binding (32.4%) unfolded protein binding (32.4%) ATP-dependent protein folding chaperone (32.4%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" QCSLGVTAQMLSVAAGTVANGGVNPVTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" HITVNYMMAK root 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) "GO:0006437 (16.8%) GO:0006083 (0%) GO:0043039 (0%)" GO:0005829 (16.8%) "GO:0004831 (16.8%) GO:0005524 (16.8%) GO:0003723 (16.8%)" "tyrosyl-tRNA aminoacylation (16.8%) acetate metabolic process (0%) tRNA aminoacylation (0%)" cytosol (16.8%) "tyrosine-tRNA ligase activity (16.8%) ATP binding (16.8%) RNA binding (16.8%)" "IPR002305 (12.8%) IPR002307 (12.8%) IPR024088 (12.8%)" "Aminoacyl-tRNA synthetase, class Ic (12.8%) Tyrosine-tRNA ligase (12.8%) Tyrosine-tRNA ligase, bacterial-type (12.8%)" VAYTELVPEITQEPDYEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.11.1.24 (95%) 1.11.1.- (5%)" "thioredoxin-dependent peroxiredoxin (95%) Peroxidases (5%)" GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" DGYDKILAEINYLETVKRPEISAQIAEAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006354 (20%) GO:0032784 (20%)" "GO:0003677 (20%) GO:0003746 (20%) GO:0070063 (20%)" "DNA-templated transcription elongation (20%) regulation of DNA-templated transcription elongation (20%)" "DNA binding (20%) translation elongation factor activity (20%) RNA polymerase binding (20%)" "IPR001437 (12.5%) IPR006359 (12.5%) IPR018151 (12.5%)" "Transcription elongation factor, GreA/GreB, C-terminal (12.5%) Transcription elongation factor GreA (12.5%) Transcription elongation factor, GreA/GreB, conserved site (12.5%)" FATPIFDGATLDDLNEWTDKAGIPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (18.8%) GO:0006508 (3%)" GO:0000428 (18.8%) "GO:0003677 (18.8%) GO:0003899 (18.8%) GO:0032549 (18.8%)" "DNA-templated transcription (18.8%) proteolysis (3%)" DNA-directed RNA polymerase complex (18.8%) "DNA binding (18.8%) DNA-directed RNA polymerase activity (18.8%) ribonucleoside binding (18.8%)" "IPR007120 (7.6%) IPR007121 (7.6%) IPR007645 (7.6%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.6%) RNA polymerase, beta subunit, conserved site (7.6%) RNA polymerase Rpb2, domain 3 (7.6%)" TNQSMTIDLRPTCDKGQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.9%) IPR007121 (7.9%) IPR007645 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) RNA polymerase, beta subunit, conserved site (7.9%) RNA polymerase Rpb2, domain 3 (7.9%)" AWNRLDILYEETESLFKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.3.16 (100%) L-aspartate oxidase (100%) GO:0034628 (33.3%) GO:0005737 (33.3%) GO:0008734 (33.3%) 'de novo' NAD+ biosynthetic process from L-aspartate (33.3%) cytoplasm (33.3%) L-aspartate oxidase activity (33.3%) "IPR003953 (16.7%) IPR005288 (16.7%) IPR015939 (16.7%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (16.7%) L-aspartate oxidase (16.7%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (16.7%)" NQSIGYMDAPVPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.5.1.72 (100%) quinolinate synthase (100%) GO:0034628 (20%) GO:0005829 (20%) "GO:0008987 (20%) GO:0046872 (20%) GO:0051539 (20%)" 'de novo' NAD+ biosynthetic process from L-aspartate (20%) cytosol (20%) "quinolinate synthetase A activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR003473 (33.3%) IPR023066 (33.3%) IPR036094 (33.3%)" "Quinolinate synthetase A (33.3%) Quinolinate synthase A, type 2 (33.3%) Quinolinate synthetase A superfamily (33.3%)" AGNVAADGVIK root GO:0006414 (0.2%) "GO:0005737 (49.1%) GO:0005739 (0.1%) GO:0005829 (0.1%)" "GO:0003746 (50.2%) GO:0005085 (0.1%) GO:0008270 (0.1%)" translational elongation (0.2%) "cytoplasm (49.1%) mitochondrion (0.1%) cytosol (0.1%)" "translation elongation factor activity (50.2%) guanyl-nucleotide exchange factor activity (0.1%) zinc ion binding (0.1%)" "IPR001816 (20.1%) IPR018101 (20.1%) IPR036402 (20%)" "Translation elongation factor EFTs/EF1B (20.1%) Translation elongation factor Ts, conserved site (20.1%) Elongation factor Ts, dimerisation domain superfamily (20%)" VKEGDLEQAMAAYGVVTSVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0003723 (100%) RNA binding (100%) "IPR000504 (25%) IPR012677 (25%) IPR035979 (25%)" "RNA recognition motif domain (25%) Nucleotide-binding alpha-beta plait domain superfamily (25%) RNA-binding domain superfamily (25%)" ACIGIITNPVNTTVAIAAEVLKK Bacteria Bacteria "1.1.1.37 (99.8%) 1.-.-.- (0.1%) 1.1.1.- (0.1%)" "malate dehydrogenase (99.8%) Oxidoreductases (0.1%) With NAD(+) or NADP(+) as acceptor (0.1%)" "GO:0006099 (25.1%) GO:0006108 (23.7%) GO:0019752 (0.8%)" "GO:0005737 (25.1%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0030060 (25.1%) GO:0016491 (0.1%) GO:0016615 (0%)" "tricarboxylic acid cycle (25.1%) malate metabolic process (23.7%) carboxylic acid metabolic process (0.8%)" "cytoplasm (25.1%) cytosol (0%) membrane (0%)" "L-malate dehydrogenase (NAD+) activity (25.1%) oxidoreductase activity (0.1%) malate dehydrogenase activity (0%)" "IPR036291 (15.8%) IPR001236 (15.7%) IPR022383 (15.6%)" "NAD(P)-binding domain superfamily (15.8%) Lactate/malate dehydrogenase, N-terminal (15.7%) Lactate/malate dehydrogenase, C-terminal (15.6%)" VKAQYPAHVQALFNDNIIYHVNPTGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.5.1.6 (100%) methionine adenosyltransferase (100%) "GO:0006556 (16.7%) GO:0006730 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0004478 (16.7%) GO:0005524 (16.7%)" "S-adenosylmethionine biosynthetic process (16.7%) one-carbon metabolic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) methionine adenosyltransferase activity (16.7%) ATP binding (16.7%)" "IPR002133 (16.7%) IPR022628 (16.7%) IPR022629 (16.7%)" "S-adenosylmethionine synthetase (16.7%) S-adenosylmethionine synthetase, N-terminal (16.7%) S-adenosylmethionine synthetase, central domain (16.7%)" DGSVVVLGYTDRIGSDAYNQGLSER Bacteria Bacteria "GO:0034220 (17.9%) GO:0006811 (6.6%) GO:0006974 (0.2%)" "GO:0009279 (24.5%) GO:0046930 (24.5%) GO:0016020 (0.2%)" "GO:0015288 (24.5%) GO:0015075 (0.2%) GO:0042802 (0.2%)" "monoatomic ion transmembrane transport (17.9%) monoatomic ion transport (6.6%) DNA damage response (0.2%)" "cell outer membrane (24.5%) pore complex (24.5%) membrane (0.2%)" "porin activity (24.5%) monoatomic ion transmembrane transporter activity (0.2%) identical protein binding (0.2%)" "IPR002368 (12.7%) IPR006664 (12.7%) IPR006665 (12.7%)" "Outer membrane protein, OmpA (12.7%) Outer membrane protein, bacterial (12.7%) OmpA-like domain (12.7%)" LAEVSNAIIDQCVAQGVPFAR Bacteria Bacteria "1.3.5.1 (98.6%) 1.3.5.4 (1.4%)" "succinate dehydrogenase (98.6%) Transferred entry: 1.3.5.1 (1.4%)" GO:0009061 (19.9%) GO:0005886 (19.9%) "GO:0009055 (19.9%) GO:0050660 (19.9%) GO:0000104 (14.1%)" anaerobic respiration (19.9%) plasma membrane (19.9%) "electron transfer activity (19.9%) flavin adenine dinucleotide binding (19.9%) succinate dehydrogenase activity (14.1%)" "IPR003953 (14.5%) IPR030664 (14.5%) IPR036188 (14.5%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.5%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (14.5%) FAD/NAD(P)-binding domain superfamily (14.5%)" HVVYNTSDIGCPTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.2.1.22 (73.3%) 3.2.1.0 (20%) 3.2.1.- (6.7%)" "alpha-galactosidase (73.3%) Unknown (20%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (6.7%)" "GO:0004557 (65.5%) GO:0016798 (34.5%)" "alpha-galactosidase activity (65.5%) hydrolase activity, acting on glycosyl bonds (34.5%)" "IPR011050 (25.2%) IPR012334 (25.2%) IPR056441 (25.2%)" "Pectin lyase fold/virulence factor (25.2%) Pectin lyase fold (25.2%) GLAA-B, beta-barrel domain II (25.2%)" IIMEYLDERFPHPPLMPVYPVAR root "1.20.4.2 (33.3%) 1.8.5.1 (33.3%) 2.5.1.18 (33.3%)" "methylarsonate reductase (33.3%) glutathione dehydrogenase (ascorbate) (33.3%) glutathione transferase (33.3%)" "GO:0006412 (0.1%) GO:0006950 (0.1%) GO:0042594 (0.1%)" "GO:0005737 (96.6%) GO:0005829 (0.1%) GO:0005840 (0.1%)" "GO:0016740 (2.2%) GO:0004364 (0.5%) GO:0003735 (0.1%)" "translation (0.1%) response to stress (0.1%) response to starvation (0.1%)" "cytoplasm (96.6%) cytosol (0.1%) ribosome (0.1%)" "transferase activity (2.2%) glutathione transferase activity (0.5%) structural constituent of ribosome (0.1%)" "IPR050983 (11.2%) IPR004045 (11.2%) IPR036249 (11.2%)" "Glutathione S-transferase Omega/HSP26 (11.2%) Glutathione S-transferase, N-terminal (11.2%) Thioredoxin-like superfamily (11.2%)" IYSEASTMEAAEEIGQK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "5.4.2.10 (90%) 5.4.2.2 (10%)" "phosphoglucosamine mutase (90%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (10%)" "GO:0005975 (14%) GO:0006048 (14%) GO:0009252 (14%)" GO:0005829 (14%) "GO:0000287 (14%) GO:0004615 (14%) GO:0008966 (14%)" "carbohydrate metabolic process (14%) UDP-N-acetylglucosamine biosynthetic process (14%) peptidoglycan biosynthetic process (14%)" cytosol (14%) "magnesium ion binding (14%) phosphomannomutase activity (14%) phosphoglucosamine mutase activity (14%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" AFDVCRDPFTALEQLIELGCDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0005507 (50%) cytoplasm (50%) copper ion binding (50%) "IPR005627 (50%) IPR036822 (50%)" "CutC-like (50%) CutC-like domain superfamily (50%)" VVVAEGFVYAPETDKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR032286 (100%) Protein of unknown function DUF4837 (100%) ELQSLGVQPDILVLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (12.5%) GO:0044210 (12%) GO:0006241 (0.5%)" "GO:0005829 (12.5%) GO:0097268 (9.1%)" "GO:0003883 (12.5%) GO:0005524 (12.5%) GO:0042802 (12.5%)" "pyrimidine nucleobase biosynthetic process (12.5%) 'de novo' CTP biosynthetic process (12%) CTP biosynthetic process (0.5%)" "cytosol (12.5%) cytoophidium (9.1%)" "CTP synthase activity (12.5%) ATP binding (12.5%) identical protein binding (12.5%)" "IPR004468 (17%) IPR017456 (17%) IPR027417 (17%)" "CTP synthase (17%) CTP synthase, N-terminal (17%) P-loop containing nucleoside triphosphate hydrolase (17%)" LQTLGLTQGTVVTLSAEGEDEQKAVEHLVK root 2.7.3.9 (100%) phosphoenolpyruvate--protein phosphotransferase (100%) "GO:0009401 (45.3%) GO:0043609 (0.1%) GO:0045819 (0.1%)" "GO:0005737 (45.2%) GO:0005829 (0.1%)" "GO:0016740 (8.3%) GO:0008965 (0.3%) GO:0004857 (0.1%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (45.3%) regulation of carbon utilization (0.1%) positive regulation of glycogen catabolic process (0.1%)" "cytoplasm (45.2%) cytosol (0.1%)" "transferase activity (8.3%) phosphoenolpyruvate-protein phosphotransferase activity (0.3%) enzyme inhibitor activity (0.1%)" "IPR000032 (20%) IPR002114 (20%) IPR035895 (20%)" "Phosphocarrier protein HPr-like (20%) Phosphotransferase system, HPr serine phosphorylation site (20%) HPr-like superfamily (20%)" MLHNESHKFESTFVGVTIPTNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" HSTPVMNALR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR011542 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufD (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" IFPIESPAIDSITVNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001857 (25%) IPR008991 (25%) IPR018257 (25%)" "Large ribosomal subunit protein bL19 (25%) Translation protein SH3-like domain superfamily (25%) Large ribosomal subunit protein bL19, conserved site (25%)" TANASGEEVCENKDLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0019450 (50%) GO:0080146 (50%) L-cysteine catabolic process to pyruvate (50%) L-cysteine desulfhydrase activity (50%) "IPR005130 (50%) IPR021144 (50%)" "Serine dehydratase-like, alpha subunit (50%) Uncharacterised protein family UPF0597 (50%)" TVYSTENPDLLVLEFR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) "GO:0006189 (20%) GO:0009236 (19.4%) GO:0006164 (0.1%)" "GO:0005829 (20%) GO:0016020 (0%)" "GO:0004639 (20.1%) GO:0005524 (20.1%) GO:0016874 (0.2%)" "'de novo' IMP biosynthetic process (20%) cobalamin biosynthetic process (19.4%) purine nucleotide biosynthetic process (0.1%)" "cytosol (20%) membrane (0%)" "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (20.1%) ATP binding (20.1%) ligase activity (0.2%)" "IPR028923 (20.3%) IPR050089 (20.2%) IPR018236 (20%)" "SAICAR synthetase/ADE2, N-terminal (20.3%) SAICAR synthetase (20.2%) SAICAR synthetase, conserved site (20%)" VTAERNPADLPWK Bacteria Bacteria "1.2.1.- (88.2%) 1.2.1.12 (11.8%)" "With NAD(+) or NADP(+) as acceptor (88.2%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (11.8%)" GO:0006006 (25%) "GO:0016620 (25%) GO:0050661 (25%) GO:0051287 (25%)" glucose metabolic process (25%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (25%) NADP binding (25%) NAD binding (25%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" SQNWLPSIFNDFFDNELMAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" AAVDAGFVEHDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033539 (33.3%) "GO:0009055 (33.3%) GO:0050660 (33.3%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (33.3%) "electron transfer activity (33.3%) flavin adenine dinucleotide binding (33.3%)" "IPR001308 (16.8%) IPR014729 (16.8%) IPR014730 (16.8%)" "Electron transfer flavoprotein alpha subunit/FixB (16.8%) Rossmann-like alpha/beta/alpha sandwich fold (16.8%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.8%)" VSWLYPTDYEKQAEAYK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.16.1.1 (100%) mercury(II) reductase (100%) "GO:0003955 (45.7%) GO:0050660 (45.7%) GO:0016152 (5.7%)" "NAD(P)H dehydrogenase (quinone) activity (45.7%) flavin adenine dinucleotide binding (45.7%) mercury (II) reductase (NADP+) activity (5.7%)" "IPR001100 (20%) IPR004099 (20%) IPR016156 (20%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (20%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (20%) FAD/NAD-linked reductase, dimerisation domain superfamily (20%)" NIPTVLFFKDGK Bacteria Bacteria 1.8.4.2 (100%) protein-disulfide reductase (glutathione) (100%) GO:0045454 (33.3%) GO:0005829 (33.3%) "GO:0015035 (30.1%) GO:0019153 (3.2%)" cell redox homeostasis (33.3%) cytosol (33.3%) "protein-disulfide reductase activity (30.1%) protein-disulfide reductase (glutathione) activity (3.2%)" "IPR013766 (25.6%) IPR036249 (25.6%) IPR005746 (24.8%)" "Thioredoxin domain (25.6%) Thioredoxin-like superfamily (25.6%) Thioredoxin (24.8%)" TEIQAPSLTKDQLYGTMLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR027823 (100%) Domain of unknown function DUF4468 with TBP-like fold (100%) VSGGLHGVGVSCVNALSTHMTTQVFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (12.9%) GO:0006261 (11.7%)" "GO:0005694 (11.9%) GO:0005737 (11.9%)" "GO:0003677 (13.1%) GO:0005524 (13.1%) GO:0046872 (12.1%)" "DNA topological change (12.9%) DNA-templated DNA replication (11.7%)" "chromosome (11.9%) cytoplasm (11.9%)" "DNA binding (13.1%) ATP binding (13.1%) metal ion binding (12.1%)" "IPR036890 (8%) IPR000565 (7.8%) IPR001241 (7.8%)" "Histidine kinase/HSP90-like ATPase superfamily (8%) DNA topoisomerase, type IIA, subunit B (7.8%) DNA topoisomerase, type IIA (7.8%)" ALSYNVQQVGGDAINTVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0044718 (33.3%) GO:0009279 (33.3%) GO:0015344 (33.3%) siderophore transmembrane transport (33.3%) cell outer membrane (33.3%) siderophore uptake transmembrane transporter activity (33.3%) "IPR000531 (11.2%) IPR012910 (11.2%) IPR023996 (11.2%)" "TonB-dependent receptor-like, beta-barrel (11.2%) TonB-dependent receptor, plug domain (11.2%) TonB-dependent outer membrane protein, SusC/RagA (11.2%)" MIDDVLNHGYER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (8.3%) IPR003029 (8.3%) IPR004087 (8.3%)" "Exoribonuclease, phosphorolytic domain 1 (8.3%) S1 domain (8.3%) K Homology domain (8.3%)" ILIGHCAAGLLFDFAGITEGKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006508 (24.3%) GO:0005737 (51.4%) GO:0008233 (24.3%) proteolysis (24.3%) cytoplasm (51.4%) peptidase activity (24.3%) "IPR002818 (33.3%) IPR029062 (33.3%) IPR050325 (33.3%)" "DJ-1/PfpI (33.3%) Class I glutamine amidotransferase-like (33.3%) Protein/nucleic acid deglycase (33.3%)" VQFIDEPVKATTEPDGSR root 2.-.-.- (100%) Transferases (100%) "GO:0008360 (14.3%) GO:0071555 (14.3%) GO:0018104 (14.2%)" "GO:0042597 (14.3%) GO:0005576 (14.2%) GO:0030288 (0%)" "GO:0016757 (14.2%) GO:0071972 (14.2%) GO:0016740 (0.1%)" "regulation of cell shape (14.3%) cell wall organization (14.3%) peptidoglycan-protein cross-linking (14.2%)" "periplasmic space (14.3%) extracellular region (14.2%) outer membrane-bounded periplasmic space (0%)" "glycosyltransferase activity (14.2%) peptidoglycan L,D-transpeptidase activity (14.2%) transferase activity (0.1%)" "IPR005490 (25.1%) IPR038063 (25%) IPR041597 (25%)" "L,D-transpeptidase catalytic domain (25.1%) L,D-transpeptidase catalytic domain-like (25%) L,D-transpeptidase C-terminal domain (25%)" AVAVDSGVTAVAKR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.9%) GO:0006352 (0%) GO:0006412 (0%)" "GO:0000428 (20.1%) GO:0005829 (0%) GO:0000345 (0%)" "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (19.7%)" "DNA-templated transcription (19.9%) DNA-templated transcription initiation (0%) translation (0%)" "DNA-directed RNA polymerase complex (20.1%) cytosol (0%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (19.7%)" "IPR015712 (9.5%) IPR019462 (9.4%) IPR042107 (9.4%)" "DNA-directed RNA polymerase, subunit 2 (9.5%) DNA-directed RNA polymerase, beta subunit, external 1 domain (9.4%) DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily (9.4%)" LKSQEMVILTPVLQSVDKSQSYQFNPIVITGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016020 (100%) membrane (100%) "IPR006665 (16.9%) IPR011990 (16.9%) IPR019734 (16.9%)" "OmpA-like domain (16.9%) Tetratricopeptide-like helical domain superfamily (16.9%) Tetratricopeptide repeat (16.9%)" DVAEILLEGLRR root 2.6.1.16 (100%) glutamine--fructose-6-phosphate transaminase (isomerizing) (100%) "GO:0006002 (12.8%) GO:0006487 (12.8%) GO:0006047 (12.8%)" GO:0005829 (12.8%) "GO:0004360 (12.8%) GO:0097367 (12.4%) GO:0008483 (0.1%)" "fructose 6-phosphate metabolic process (12.8%) protein N-linked glycosylation (12.8%) UDP-N-acetylglucosamine metabolic process (12.8%)" cytosol (12.8%) "glutamine-fructose-6-phosphate transaminase (isomerizing) activity (12.8%) carbohydrate derivative binding (12.4%) transaminase activity (0.1%)" "IPR017932 (12.8%) IPR029055 (12.8%) IPR047084 (12.6%)" "Glutamine amidotransferase type 2 domain (12.8%) Nucleophile aminohydrolases, N-terminal (12.8%) Glucosamine-fructose-6-phosphate aminotransferase, isomerising, N-terminal domain (12.6%)" VSEHGAELSSIVANATGKEYLWQADPAFWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005975 (33.3%) "GO:0016853 (33.3%) GO:0030246 (33.3%)" carbohydrate metabolic process (33.3%) "isomerase activity (33.3%) carbohydrate binding (33.3%)" "IPR008183 (25%) IPR011013 (25%) IPR014718 (25%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (25%) Galactose mutarotase-like domain superfamily (25%) Glycoside hydrolase-type carbohydrate-binding (25%)" FGYKNVMEIPKLEK Bacteria Bacteria GO:0006412 (16.9%) "GO:0005840 (16.9%) GO:1990904 (16.9%)" "GO:0003735 (16.9%) GO:0000049 (16.2%) GO:0019843 (16.2%)" translation (16.9%) "ribosome (16.9%) ribonucleoprotein complex (16.9%)" "structural constituent of ribosome (16.9%) tRNA binding (16.2%) rRNA binding (16.2%)" "IPR002132 (16.8%) IPR022803 (16.8%) IPR031309 (16.8%)" "Large ribosomal subunit protein uL5 (16.8%) Large ribosomal subunit protein uL5 domain superfamily (16.8%) Large ribosomal subunit protein uL5, C-terminal (16.8%)" TIPSFTIDHIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.4.1.21 (100%) S-ribosylhomocysteine lyase (100%) GO:0009372 (33.3%) "GO:0005506 (33.3%) GO:0043768 (33.3%)" quorum sensing (33.3%) "iron ion binding (33.3%) S-ribosylhomocysteine lyase activity (33.3%)" "IPR003815 (33.3%) IPR011249 (33.3%) IPR037005 (33.3%)" "S-ribosylhomocysteinase (LuxS) (33.3%) Metalloenzyme, LuxS/M16 peptidase-like (33.3%) S-ribosylhomocysteinase (LuxS) superfamily (33.3%)" YSGVKDDHVHFLDLPFYETGLVKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.5%) GO:0006044 (32.5%)" "GO:0004342 (32.5%) GO:0016853 (2.5%)" "carbohydrate metabolic process (32.5%) N-acetylglucosamine metabolic process (32.5%)" "glucosamine-6-phosphate deaminase activity (32.5%) isomerase activity (2.5%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" WLGGMLTNWK root "2.1.3.15 (33.3%) 2.5.1.87 (33.3%) 2.7.7.7 (33.3%)" "acetyl-CoA carboxytransferase (33.3%) ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesydiphosphate specific] (33.3%) DNA-directed DNA polymerase (33.3%)" "GO:0006412 (32.5%) GO:0000028 (0%) GO:0006633 (0%)" "GO:0022627 (30.6%) GO:0005763 (1.7%) GO:0009507 (1.6%)" "GO:0003735 (32.5%) GO:0003676 (0%) GO:0005524 (0%)" "translation (32.5%) ribosomal small subunit assembly (0%) fatty acid biosynthetic process (0%)" "cytosolic small ribosomal subunit (30.6%) mitochondrial small ribosomal subunit (1.7%) chloroplast (1.6%)" "structural constituent of ribosome (32.5%) nucleic acid binding (0%) ATP binding (0%)" "IPR001865 (24.9%) IPR005706 (24.9%) IPR023591 (24.8%)" "Small ribosomal subunit protein uS2 (24.9%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (24.9%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (24.8%)" TVAPSLGVLDKLPIGETVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005886 (100%) plasma membrane (100%) "IPR027705 (26.5%) IPR001107 (25.5%) IPR036013 (25.5%)" "Flotillin family (26.5%) Band 7 domain (25.5%) Band 7/SPFH domain superfamily (25.5%)" YNYQEVMCPPIGNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004829 (16.7%) GO:0005524 (16.7%)" threonyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) threonine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" VLEQSAESVPEYGK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales GO:0005829 (47.3%) "GO:0005524 (47.5%) GO:0016787 (5.3%)" cytosol (47.3%) "ATP binding (47.5%) hydrolase activity (5.3%)" "IPR051451 (34.1%) IPR003714 (33.1%) IPR027417 (32.8%)" "PhoH2-like (34.1%) PhoH-like protein (33.1%) P-loop containing nucleoside triphosphate hydrolase (32.8%)" ANAIAPGFIITDMTAQLSDEVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) GO:0006633 (33.3%) "GO:0004316 (33.3%) GO:0051287 (33.3%)" fatty acid biosynthetic process (33.3%) "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33.3%) NAD binding (33.3%)" "IPR002347 (16.7%) IPR011284 (16.7%) IPR020904 (16.7%)" "Short-chain dehydrogenase/reductase SDR (16.7%) 3-oxoacyl-(acyl-carrier-protein) reductase (16.7%) Short-chain dehydrogenase/reductase, conserved site (16.7%)" AQHHFFGYEGR Bacteria Bacteria 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.4%) GO:0006002 (14%)" "GO:0005829 (14.3%) GO:0005737 (0.1%)" "GO:0003872 (14.4%) GO:0047334 (14.3%) GO:0005524 (14.2%)" "response to glucose (14.4%) fructose 6-phosphate metabolic process (14%)" "cytosol (14.3%) cytoplasm (0.1%)" "6-phosphofructokinase activity (14.4%) diphosphate-fructose-6-phosphate 1-phosphotransferase activity (14.3%) ATP binding (14.2%)" "IPR000023 (25.1%) IPR011183 (25.1%) IPR035966 (25.1%)" "Phosphofructokinase domain (25.1%) Pyrophosphate-dependent phosphofructokinase PfpB (25.1%) Phosphofructokinase superfamily (25.1%)" VLGTSVEAIMYTEDRDLFVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.3.5.5 (89.9%) 6.3.4.16 (10.1%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (89.9%) carbamoyl-phosphate synthase (ammonia) (10.1%)" "GO:0006541 (14.2%) GO:0006221 (10.9%) GO:0006526 (10.8%)" GO:0005737 (14.2%) "GO:0004088 (14.2%) GO:0005524 (14.2%) GO:0046872 (14.2%)" "glutamine metabolic process (14.2%) pyrimidine nucleotide biosynthetic process (10.9%) L-arginine biosynthetic process (10.8%)" cytoplasm (14.2%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14.2%) ATP binding (14.2%) metal ion binding (14.2%)" "IPR005479 (10.2%) IPR005483 (10.2%) IPR011761 (10.2%)" "Carbamoyl phosphate synthase, ATP-binding domain (10.2%) Carbamoyl phosphate synthase, CPSase domain (10.2%) ATP-grasp fold (10.2%)" TQDATHGNSLSHR root "GO:0006412 (24.8%) GO:0002181 (0%) GO:0000027 (0%)" "GO:0022625 (24.8%) GO:0005840 (0.3%) GO:0005737 (0%)" "GO:0003735 (24.9%) GO:0019843 (24.9%) GO:0016740 (0.1%)" "translation (24.8%) cytoplasmic translation (0%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (24.8%) ribosome (0.3%) cytoplasm (0%)" "structural constituent of ribosome (24.9%) rRNA binding (24.9%) transferase activity (0.1%)" "IPR000597 (24.9%) IPR019927 (24.9%) IPR009000 (24.9%)" "Large ribosomal subunit protein uL3 (24.9%) Large ribosomal subunit protein uL3, bacteria/organella (24.9%) Translation protein, beta-barrel domain superfamily (24.9%)" IVAALLENNQTPEGIRIPK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.11 (100%) serine--tRNA ligase (100%) "GO:0006434 (24.8%) GO:0006412 (0.1%) GO:0006418 (0.1%)" "GO:0005737 (24.6%) GO:0005829 (0.1%)" "GO:0004828 (24.9%) GO:0005524 (24.9%) GO:0016874 (0.3%)" "seryl-tRNA aminoacylation (24.8%) translation (0.1%) tRNA aminoacylation for protein translation (0.1%)" "cytoplasm (24.6%) cytosol (0.1%)" "serine-tRNA ligase activity (24.9%) ATP binding (24.9%) ligase activity (0.3%)" "IPR045864 (13.8%) IPR002314 (13.7%) IPR006195 (13.7%)" "Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (13.8%) Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (13.7%) Aminoacyl-tRNA synthetase, class II (13.7%)" VPMNIVAQR root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.5%) GO:0043335 (12.4%) GO:0051083 (12.4%)" "GO:0005737 (12%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003755 (12.5%) GO:0043022 (12.4%) GO:0044183 (12.4%)" "protein transport (12.5%) protein unfolding (12.4%) 'de novo' cotranslational protein folding (12.4%)" "cytoplasm (12%) cytosol (0%) membrane (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.5%) ribosome binding (12.4%) protein folding chaperone (12.4%)" "IPR008881 (12.8%) IPR036611 (12.8%) IPR005215 (12.7%)" "Trigger factor, ribosome-binding, bacterial (12.8%) Trigger factor ribosome-binding domain superfamily (12.8%) Trigger factor (12.7%)" MAGDDLTADIVEYMR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0000902 (25%) GO:0008360 (25%)" GO:0005737 (25%) GO:0005524 (25%) "cell morphogenesis (25%) regulation of cell shape (25%)" cytoplasm (25%) ATP binding (25%) "IPR004753 (33.3%) IPR043129 (33.3%) IPR056546 (33.3%)" "Cell shape determining protein MreB (33.3%) ATPase, nucleotide binding domain (33.3%) MreB/MamK-like (33.3%)" FKDEAGEGYLLDKILDAAGQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" NYPPGQHGNNR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006412 (20%) GO:0042274 (20%)" "GO:0015935 (20%) GO:0005840 (0.1%) GO:0016020 (0.1%)" "GO:0019843 (20%) GO:0003735 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" "small ribosomal subunit (20%) ribosome (0.1%) membrane (0.1%)" "rRNA binding (20%) structural constituent of ribosome (20%)" "IPR001912 (19.1%) IPR002942 (19%) IPR005709 (19%)" "Small ribosomal subunit protein uS4, N-terminal (19.1%) RNA-binding S4 domain (19%) Small ribosomal subunit protein uS4, bacteria (19%)" VLNEMAADDALSEAVR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae IPR009624 (100%) Uncharacterised protein family UPF0253 (100%) VKNFAELQEGLAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.4.21.107 (57.1%) 3.4.21.- (42.9%)" "peptidase Do (57.1%) Serine endopeptidases (42.9%)" GO:0006508 (50%) "GO:0004252 (47.9%) GO:0008233 (2.1%)" proteolysis (50%) "serine-type endopeptidase activity (47.9%) peptidase activity (2.1%)" "IPR001478 (17.7%) IPR036034 (17%) IPR001940 (16.3%)" "PDZ domain (17.7%) PDZ superfamily (17%) Peptidase S1C (16.3%)" ALYNVLDTDVPGLPQSER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR032286 (100%) Protein of unknown function DUF4837 (100%) ADMTDEDYKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (24.7%) GO:0016887 (24.7%) GO:0051082 (24.7%)" "ATP binding (24.7%) ATP hydrolysis activity (24.7%) unfolded protein binding (24.7%)" "IPR001404 (14.9%) IPR019805 (14.9%) IPR020568 (14.9%)" "Heat shock protein Hsp90 family (14.9%) Heat shock protein Hsp90, conserved site (14.9%) Ribosomal protein uS5 domain 2-type superfamily (14.9%)" SSMKEEDQPFMTVSIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0015031 (31.9%) GO:0005886 (34.1%) GO:0022857 (34.1%) protein transport (31.9%) plasma membrane (34.1%) transmembrane transporter activity (34.1%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) ITFLDTPGHEAFTAMR root "GO:0006353 (0%) GO:0031564 (0%) GO:0006413 (0%)" "GO:0005829 (19.3%) GO:0005737 (5.1%) GO:0009536 (0%)" "GO:0003743 (24.5%) GO:0003924 (24.4%) GO:0005525 (24.4%)" "DNA-templated transcription termination (0%) transcription antitermination (0%) translational initiation (0%)" "cytosol (19.3%) cytoplasm (5.1%) plastid (0%)" "translation initiation factor activity (24.5%) GTPase activity (24.4%) GTP binding (24.4%)" "IPR000795 (8.7%) IPR005225 (8.7%) IPR015760 (8.7%)" "Translational (tr)-type GTP-binding domain (8.7%) Small GTP-binding domain (8.7%) Translation initiation factor IF- 2 (8.7%)" FDYYDLEESSESTTR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR011542 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufD (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" HMGWTEAADLIVK root 1.1.1.42 (100%) isocitrate dehydrogenase (NADP(+)) (100%) "GO:0006099 (21%) GO:0006097 (18.4%) GO:0006979 (0.1%)" "GO:0005737 (0.1%) GO:0005829 (0.1%)" "GO:0004450 (21.1%) GO:0000287 (18%) GO:0051287 (18%)" "tricarboxylic acid cycle (21%) glyoxylate cycle (18.4%) response to oxidative stress (0.1%)" "cytoplasm (0.1%) cytosol (0.1%)" "isocitrate dehydrogenase (NADP+) activity (21.1%) magnesium ion binding (18%) NAD binding (18%)" "IPR004439 (35%) IPR024084 (34.8%) IPR019818 (30.2%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (35%) Isopropylmalate dehydrogenase-like domain (34.8%) Isocitrate/isopropylmalate dehydrogenase, conserved site (30.2%)" GAVAIVCEEAPSYLEGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.2.13 (100%) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (100%) "GO:0008360 (12.5%) GO:0009252 (12.5%) GO:0051301 (12.5%)" GO:0005737 (12.5%) "GO:0000287 (12.5%) GO:0005524 (12.5%) GO:0008765 (12.5%)" "regulation of cell shape (12.5%) peptidoglycan biosynthetic process (12.5%) cell division (12.5%)" cytoplasm (12.5%) "magnesium ion binding (12.5%) ATP binding (12.5%) UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity (12.5%)" "IPR000713 (14.3%) IPR004101 (14.3%) IPR005761 (14.3%)" "Mur ligase, N-terminal catalytic domain (14.3%) Mur ligase, C-terminal (14.3%) UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (14.3%)" SQVFSTAADNQTAVDIHVLQGER Bacillota Bacteria Bacillati Bacillota "GO:0042026 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (1%) GO:0005576 (0.1%)" "GO:0005524 (33.6%) GO:0140662 (33.6%) GO:0051082 (31.1%)" "protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (1%) extracellular region (0.1%)" "ATP binding (33.6%) ATP-dependent protein folding chaperone (33.6%) unfolded protein binding (31.1%)" "IPR013126 (17.1%) IPR018181 (17.1%) IPR029047 (17.1%)" "Heat shock protein 70 family (17.1%) Heat shock protein 70, conserved site (17.1%) Heat shock protein 70kD, peptide-binding domain superfamily (17.1%)" GKYDLCVLDVMMPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" VSATGTIFGSVSNIQIAEELEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000244 (14.3%) IPR009027 (14.3%) IPR020069 (14.3%)" "Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.3%) Large ribosomal subunit protein bL9, C-terminal (14.3%)" NQGEELVALNKEVER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.1 (100%) alpha-amylase (100%) GO:0005975 (50%) "GO:0003824 (35.4%) GO:0016787 (8.3%) GO:0016798 (4.2%)" carbohydrate metabolic process (50%) "catalytic activity (35.4%) hydrolase activity (8.3%) hydrolase activity, acting on glycosyl bonds (4.2%)" "IPR004300 (33.3%) IPR011330 (33.3%) IPR052046 (33.3%)" "Glycoside hydrolase family 57, N-terminal domain (33.3%) Glycoside hydrolase/deacetylase, beta/alpha-barrel (33.3%) Glycosyl hydrolase family 57 (33.3%)" VVGYSQDYSNAIVEAVK root "GO:0006865 (33.2%) GO:0015813 (0.1%) GO:0070778 (0.1%)" "GO:0005576 (33.2%) GO:0030288 (33.1%) GO:0016020 (0.1%)" "GO:0016595 (0.1%) GO:0070335 (0.1%)" "amino acid transport (33.2%) L-glutamate transmembrane transport (0.1%) L-aspartate transmembrane transport (0.1%)" "extracellular region (33.2%) outer membrane-bounded periplasmic space (33.1%) membrane (0.1%)" "glutamate binding (0.1%) aspartate binding (0.1%)" "IPR051455 (50.1%) IPR001638 (49.9%)" "Bacterial solute-binding protein 3 (50.1%) Solute-binding protein family 3/N-terminal domain of MltF (49.9%)" TGDDAGDGTTTATVLAQAIIAEGLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.5%) GO:0005737 (15.5%) "GO:0005524 (17.5%) GO:0140662 (17.5%) GO:0016853 (16.5%)" protein refolding (17.5%) cytoplasm (15.5%) "ATP binding (17.5%) ATP-dependent protein folding chaperone (17.5%) isomerase activity (16.5%)" "IPR001844 (17%) IPR002423 (17%) IPR027410 (17%)" "Chaperonin Cpn60/GroEL (17%) Chaperonin Cpn60/GroEL/TCP-1 family (17%) TCP-1-like chaperonin intermediate domain superfamily (17%)" ETIEFEGETYPLVK Bacteria Bacteria GO:0006412 (24.6%) "GO:0005840 (25.1%) GO:1990904 (25.1%)" GO:0003735 (25.1%) translation (24.6%) "ribosome (25.1%) ribonucleoprotein complex (25.1%)" structural constituent of ribosome (25.1%) "IPR002150 (25.3%) IPR027493 (25.3%) IPR034704 (24.7%)" "Large ribosomal subunit protein bL31 type A/B (25.3%) Large ribosomal subunit protein bL31 type B (25.3%) Large ribosomal subunit protein bL28/bL31-like superfamily (24.7%)" IITHPNFNGNTLDNDIMLIK Sus scrofa Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Laurasiatheria Artiodactyla Suina Suidae Sus Sus scrofa 3.4.21.4 (100%) trypsin (100%) "GO:0006508 (24.2%) GO:0007586 (24.2%)" "GO:0005576 (18.2%) GO:0005615 (6.1%)" "GO:0004252 (24.2%) GO:0046872 (3%)" "proteolysis (24.2%) digestion (24.2%)" "extracellular region (18.2%) extracellular space (6.1%)" "serine-type endopeptidase activity (24.2%) metal ion binding (3%)" "IPR001254 (14.3%) IPR001314 (14.3%) IPR009003 (14.3%)" "Serine proteases, trypsin domain (14.3%) Peptidase S1A, chymotrypsin family (14.3%) Peptidase S1, PA clan (14.3%)" DAGVPMKKPVSGIAMGLISENK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8.3%) IPR003029 (8.3%) IPR004087 (8.3%)" "Exoribonuclease, phosphorolytic domain 1 (8.3%) S1 domain (8.3%) K Homology domain (8.3%)" IGATIMANACGPCIGQWK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" AGPVLTEPIMKLEVVTPEENMGDVIGDLNKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (20.4%) GO:0005737 (19.4%) "GO:0003746 (20.4%) GO:0005525 (20.4%) GO:0003924 (19.4%)" ribosome disassembly (20.4%) cytoplasm (19.4%) "translation elongation factor activity (20.4%) GTP binding (20.4%) GTPase activity (19.4%)" "IPR000640 (6.4%) IPR005517 (6.4%) IPR014721 (6.4%)" "Elongation factor EFG, domain V-like (6.4%) Translation elongation factor EFG/EF2, domain IV (6.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.4%)" KILEVSGCDPQTTELDGKPLADHLLAPTR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 6.3.3.1 (100%) phosphoribosylformylglycinamidine cyclo-ligase (100%) "GO:0006189 (16.6%) GO:0046084 (16.6%) GO:0006164 (0.1%)" GO:0005829 (16.6%) "GO:0004637 (16.6%) GO:0004641 (16.6%) GO:0005524 (16.6%)" "'de novo' IMP biosynthetic process (16.6%) adenine biosynthetic process (16.6%) purine nucleotide biosynthetic process (0.1%)" cytosol (16.6%) "phosphoribosylamine-glycine ligase activity (16.6%) phosphoribosylformylglycinamidine cyclo-ligase activity (16.6%) ATP binding (16.6%)" "IPR004733 (20.3%) IPR010918 (20.3%) IPR036676 (20.3%)" "Phosphoribosylformylglycinamidine cyclo-ligase (20.3%) PurM-like, C-terminal domain (20.3%) PurM-like, C-terminal domain superfamily (20.3%)" FSPGYHEQQVVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015159 (100%) polysaccharide transmembrane transporter activity (100%) "IPR003715 (33.3%) IPR019554 (33.3%) IPR049712 (33.3%)" "Polysaccharide export protein, N-terminal domain (33.3%) Soluble ligand binding domain (33.3%) Polysaccharide export protein (33.3%)" TYYPADFIAEGVDQTR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0004822 (14.3%) GO:0005524 (14.3%)" isoleucyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) isoleucine-tRNA ligase activity (14.3%) ATP binding (14.3%)" "IPR002300 (12.6%) IPR002301 (12.6%) IPR013155 (12.6%)" "Aminoacyl-tRNA synthetase, class Ia (12.6%) Isoleucine-tRNA ligase (12.6%) Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding (12.6%)" VIWDILEHVMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) GO:0000428 (17.1%) "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (15.5%)" DNA-templated transcription (17%) DNA-directed RNA polymerase complex (17.1%) "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (15.5%)" "IPR000722 (9.2%) IPR006592 (9.2%) IPR045867 (9.2%)" "RNA polymerase, alpha subunit (9.2%) RNA polymerase, N-terminal (9.2%) DNA-directed RNA polymerase, subunit beta-prime (9.2%)" VKDVVDTGKNQVEYVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis AEVTGSGKKPWR root "GO:0006412 (19.8%) GO:0006353 (0.2%) GO:0006417 (0.2%)" "GO:0005840 (20.1%) GO:1990904 (19.8%) GO:0022625 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.6%) GO:0001070 (0%)" "translation (19.8%) DNA-templated transcription termination (0.2%) regulation of translation (0.2%)" "ribosome (20.1%) ribonucleoprotein complex (19.8%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.6%) RNA-binding transcription regulator activity (0%)" "IPR002136 (33.1%) IPR013005 (33.1%) IPR023574 (33.1%)" "Large ribosomal subunit protein uL4 (33.1%) Large ribosomal subunit protein uL4-like (33.1%) Large ribosomal subunit protein uL4 domain superfamily (33.1%)" AGGIAAFIDAEHAFDR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006281 (12.8%) GO:0006310 (12.8%) GO:0009432 (11.6%)" "GO:0005829 (12.8%) GO:0005737 (0%)" "GO:0003697 (12.8%) GO:0005524 (12.8%) GO:0140664 (12.8%)" "DNA repair (12.8%) DNA recombination (12.8%) SOS response (11.6%)" "cytosol (12.8%) cytoplasm (0%)" "single-stranded DNA binding (12.8%) ATP binding (12.8%) ATP-dependent DNA damage sensor activity (12.8%)" "IPR013765 (11.4%) IPR020588 (11.4%) IPR049428 (11.4%)" "DNA recombination and repair protein RecA (11.4%) DNA recombination and repair protein RecA-like, ATP-binding domain (11.4%) RecA-like, N-terminal (11.4%)" KYGLFDYYGAEDAER Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "1.2.7.1 (73.7%) 1.2.7.- (26.3%)" "pyruvate synthase (73.7%) With an iron-sulfur protein as acceptor (26.3%)" "GO:0006979 (14.6%) GO:0022900 (14.6%) GO:0044281 (12.3%)" "GO:0005506 (14.6%) GO:0051539 (14.6%) GO:0030976 (14.5%)" "response to oxidative stress (14.6%) electron transport chain (14.6%) small molecule metabolic process (12.3%)" "iron ion binding (14.6%) 4 iron, 4 sulfur cluster binding (14.6%) thiamine pyrophosphate binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" DSLSMTQKYPDGEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (18.9%) GO:0006164 (1.1%)" GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (18.9%) GO:0046872 (18.9%)" "'de novo' IMP biosynthetic process (18.9%) purine nucleotide biosynthetic process (1.1%)" cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (18.9%) metal ion binding (18.9%)" "IPR010918 (11.4%) IPR029062 (11.4%) IPR036676 (11.4%)" "PurM-like, C-terminal domain (11.4%) Class I glutamine amidotransferase-like (11.4%) PurM-like, C-terminal domain superfamily (11.4%)" VSYPIYHIENIVKPISK Pseudomonadati Bacteria Pseudomonadati 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.3%) GO:0005829 (17.3%) "GO:0004612 (17.3%) GO:0005524 (17.3%) GO:0046872 (17.3%)" gluconeogenesis (17.3%) cytosol (17.3%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.3%) ATP binding (17.3%) metal ion binding (17.3%)" "IPR001272 (25.1%) IPR008210 (25.1%) IPR013035 (25.1%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.1%) Phosphoenolpyruvate carboxykinase, N-terminal (25.1%) Phosphoenolpyruvate carboxykinase, C-terminal (25.1%)" AYGESASGIGTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0000917 (14.6%) GO:0043093 (13.6%) GO:0051258 (13.6%)" "GO:0005737 (14.6%) GO:0032153 (14.6%)" "GO:0003924 (14.6%) GO:0005525 (14.6%)" "division septum assembly (14.6%) FtsZ-dependent cytokinesis (13.6%) protein polymerization (13.6%)" "cytoplasm (14.6%) cell division site (14.6%)" "GTPase activity (14.6%) GTP binding (14.6%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" GITGEVLLQLLEGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" GTYQYMLLEHAADPDTLVHEWAEGVVGDQYPVPDR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "4.1.1.12 (90.9%) 2.6.1.1 (9.1%)" "aspartate 4-decarboxylase (90.9%) aspartate transaminase (9.1%)" GO:0006520 (27.6%) "GO:0030170 (27.6%) GO:0008483 (24.1%) GO:0047688 (12.1%)" amino acid metabolic process (27.6%) "pyridoxal phosphate binding (27.6%) transaminase activity (24.1%) aspartate 4-decarboxylase activity (12.1%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" ETGRVDYDQMEEIALR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.3%) GO:0035999 (15.3%) GO:0032259 (11.5%)" GO:0005829 (15.3%) "GO:0004372 (15.3%) GO:0030170 (15.3%) GO:0008168 (11.5%)" "glycine biosynthetic process from serine (15.3%) tetrahydrofolate interconversion (15.3%) methylation (11.5%)" cytosol (15.3%) "glycine hydroxymethyltransferase activity (15.3%) pyridoxal phosphate binding (15.3%) methyltransferase activity (11.5%)" "IPR001085 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Serine hydroxymethyltransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" NKLIEMADESIKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "4.1.1.12 (81.3%) 2.6.1.1 (18.8%)" "aspartate 4-decarboxylase (81.3%) aspartate transaminase (18.8%)" GO:0006520 (27.4%) "GO:0030170 (27.4%) GO:0008483 (22.2%) GO:0047688 (11.1%)" amino acid metabolic process (27.4%) "pyridoxal phosphate binding (27.4%) transaminase activity (22.2%) aspartate 4-decarboxylase activity (11.1%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" LFNLVQPDIACFGEKDFQQLALIRK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 6.3.2.1 (100%) pantoate--beta-alanine ligase (AMP-forming) (100%) GO:0015940 (24.8%) GO:0005829 (24.8%) "GO:0004592 (24.8%) GO:0005524 (24.8%) GO:0016874 (0.7%)" pantothenate biosynthetic process (24.8%) cytosol (24.8%) "pantoate-beta-alanine ligase activity (24.8%) ATP binding (24.8%) ligase activity (0.7%)" "IPR003721 (26.2%) IPR014729 (26.2%) IPR042176 (25.8%)" "Pantoate-beta-alanine ligase (26.2%) Rossmann-like alpha/beta/alpha sandwich fold (26.2%) Pantoate-beta-alanine ligase, C-terminal domain (25.8%)" IFTMLSDLSNLER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IDAIIKPFKLDDVR root "6.4.1.2 (60%) 1.18.6.1 (20%) 2.4.2.17 (20%)" "acetyl-CoA carboxylase (60%) nitrogenase (20%) ATP phosphoribosyltransferase (20%)" "GO:0006808 (24.4%) GO:0009399 (0%) GO:0042304 (0%)" "GO:0005829 (24.3%) GO:0005737 (0.1%)" "GO:0030234 (24.4%) GO:0005524 (24.3%) GO:0046872 (2.3%)" "regulation of nitrogen utilization (24.4%) nitrogen fixation (0%) regulation of fatty acid biosynthetic process (0%)" "cytosol (24.3%) cytoplasm (0.1%)" "enzyme regulator activity (24.4%) ATP binding (24.3%) metal ion binding (2.3%)" "IPR002187 (20.1%) IPR011322 (20.1%) IPR015867 (20.1%)" "Nitrogen regulatory protein PII (20.1%) Nitrogen regulatory PII-like, alpha/beta (20.1%) Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal (20.1%)" AKQAAIELDGTIVEALSNAMFR Duncaniella Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Duncaniella GO:0005829 (25%) "GO:0003743 (25%) GO:0019843 (25%) GO:0043022 (25%)" cytosol (25%) "translation initiation factor activity (25%) rRNA binding (25%) ribosome binding (25%)" "IPR003029 (25%) IPR004368 (25%) IPR006196 (25%)" "S1 domain (25%) Translation initiation factor IF-1 (25%) RNA-binding domain, S1, IF1 type (25%)" IVGLQTEAPLKR Bacteria Bacteria 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (30.4%) GO:0005975 (0%) GO:0044814 (0%)" "GO:0005829 (32%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0008861 (32%) GO:0016829 (5.1%) GO:0016746 (0.2%)" "glucose metabolic process (30.4%) carbohydrate metabolic process (0%) pyruvate fermentation via PFL (0%)" "cytosol (32%) cytoplasm (0.1%) membrane (0%)" "formate C-acetyltransferase activity (32%) lyase activity (5.1%) acyltransferase activity (0.2%)" "IPR004184 (20.7%) IPR050244 (20.7%) IPR005949 (19.6%)" "Pyruvate formate lyase domain (20.7%) Autonomous Glycyl Radical Cofactor (20.7%) Formate acetyltransferase (19.6%)" EDLANLSNMTTSNAIR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006355 (0.5%) GO:0005829 (32.4%) "GO:0003677 (33%) GO:0003700 (32.4%) GO:0016301 (1.6%)" regulation of DNA-templated transcription (0.5%) cytosol (32.4%) "DNA binding (33%) DNA-binding transcription factor activity (32.4%) kinase activity (1.6%)" "IPR012318 (14.4%) IPR036388 (14.4%) IPR036390 (14.4%)" "Crp-type HTH domain (14.4%) Winged helix-like DNA-binding domain superfamily (14.4%) Winged helix DNA-binding domain superfamily (14.4%)" DTYADAAQWDEKAK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.6%) GO:0005829 (17.6%) "GO:0004612 (17.6%) GO:0005524 (17.6%) GO:0046872 (16.1%)" gluconeogenesis (17.6%) cytosol (17.6%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.6%) ATP binding (17.6%) metal ion binding (16.1%)" "IPR001272 (26.1%) IPR013035 (26.1%) IPR008210 (23.9%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (26.1%) Phosphoenolpyruvate carboxykinase, C-terminal (26.1%) Phosphoenolpyruvate carboxykinase, N-terminal (23.9%)" NFDELNQALAEGVDR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.4.2.19 (100%) nicotinate-nucleotide diphosphorylase (carboxylating) (100%) "GO:0009435 (25%) GO:0034213 (25%)" GO:0005737 (25%) GO:0004514 (25%) "NAD+ biosynthetic process (25%) quinolinate catabolic process (25%)" cytoplasm (25%) nicotinate-nucleotide diphosphorylase (carboxylating) activity (25%) "IPR002638 (14.3%) IPR004393 (14.3%) IPR013785 (14.3%)" "Quinolinate phosphoribosyl transferase, C-terminal (14.3%) Nicotinate-nucleotide pyrophosphorylase (14.3%) Aldolase-type TIM barrel (14.3%)" NAAEAAEAIGIGLQAFCIPGSVADDRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR025964 (100%) GGGtGRT protein (100%) AEEVSSEVAGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR024623 (100%) Uncharacterised protein family YtxH (100%) VVVKEQEYVMAGGPLFIDKNHPEVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "7.2.1.1 (96.8%) 1.6.5.- (3.2%)" "NADH:ubiquinone reductase (Na(+)-transporting) (96.8%) With a quinone or similar compound as acceptor (3.2%)" GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (25%) IPR022615 (25%) IPR056147 (25%)" "Na(+)-translocating NADH-quinone reductase subunit A (25%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (25%) NqrA, N-terminal barrel-sandwich hybrid domain (25%)" IEENKDNLPYLKETISLLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (46.7%) IPR019734 (46.7%) IPR013105 (6.7%)" "Tetratricopeptide-like helical domain superfamily (46.7%) Tetratricopeptide repeat (46.7%) Tetratricopeptide repeat 2 (6.7%)" VYSGIMQGGSYVLNSTK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004540 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFG/EF2 (6.3%)" KSIGTLSAFEQNALEGMLDTLKK Bacteria Bacteria 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006099 (24.2%) GO:0006108 (23.4%) GO:0006096 (0.3%)" "GO:0005737 (24.7%) GO:0005829 (0.3%) GO:0016020 (0.3%)" "GO:0030060 (24.7%) GO:0016491 (1%) GO:0016615 (0.3%)" "tricarboxylic acid cycle (24.2%) malate metabolic process (23.4%) glycolytic process (0.3%)" "cytoplasm (24.7%) cytosol (0.3%) membrane (0.3%)" "L-malate dehydrogenase (NAD+) activity (24.7%) oxidoreductase activity (1%) malate dehydrogenase activity (0.3%)" "IPR015955 (13.2%) IPR022383 (13.2%) IPR001252 (12.5%)" "Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (13.2%) Lactate/malate dehydrogenase, C-terminal (13.2%) Malate dehydrogenase, active site (12.5%)" EAVACGYWHLWR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (77.8%) 1.2.7.- (22.2%)" "pyruvate synthase (77.8%) With an iron-sulfur protein as acceptor (22.2%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (12.7%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (12.7%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" VHAIGAGCFIAEIQQTSNITYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (17.4%) IPR014628 (17.4%) IPR014710 (17.4%)" "RmlC-like cupin domain superfamily (17.4%) Mannose-6-phosphate isomerase, Firmicutes type, short form (17.4%) RmlC-like jelly roll fold (17.4%)" MTESFAQLFEESLKEIETRPGSIVR root "GO:0006412 (24.7%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.7%) GO:0005840 (0.6%) GO:0005737 (0%)" "GO:0003729 (24.7%) GO:0003735 (24.7%) GO:0003676 (0.1%)" "translation (24.7%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.7%) ribosome (0.6%) cytoplasm (0%)" "mRNA binding (24.7%) structural constituent of ribosome (24.7%) nucleic acid binding (0.1%)" "IPR012340 (20.2%) IPR035104 (20.2%) IPR003029 (20.2%)" "Nucleic acid-binding, OB-fold (20.2%) Ribosomal protein S1-like (20.2%) S1 domain (20.2%)" ALQILAESQDAEAQKA Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003677 (100%) DNA binding (100%) GQPVSTLLSEEKLNEVVASTMVGGATLTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (27%) GO:0006099 (23%)" "GO:0004459 (27%) GO:0030060 (22.1%) GO:0016491 (0.8%)" "lactate metabolic process (27%) tricarboxylic acid cycle (23%)" "L-lactate dehydrogenase (NAD+) activity (27%) L-malate dehydrogenase (NAD+) activity (22.1%) oxidoreductase activity (0.8%)" "IPR001236 (17.2%) IPR015955 (17.2%) IPR022383 (17.2%)" "Lactate/malate dehydrogenase, N-terminal (17.2%) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (17.2%) Lactate/malate dehydrogenase, C-terminal (17.2%)" SADELEQAWHYGCEGSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "6.3.1.21 (90.9%) 2.1.2.- (9.1%)" "phosphoribosylglycinamide formyltransferase 2 (90.9%) Hydroxymethyl-, formyl- and related transferases (9.1%)" "GO:0006189 (15.3%) GO:0006164 (0.8%) GO:0009152 (0.8%)" GO:0005829 (16.8%) "GO:0005524 (16.8%) GO:0000287 (16%) GO:0004644 (16%)" "'de novo' IMP biosynthetic process (15.3%) purine nucleotide biosynthetic process (0.8%) purine ribonucleotide biosynthetic process (0.8%)" cytosol (16.8%) "ATP binding (16.8%) magnesium ion binding (16%) phosphoribosylglycinamide formyltransferase activity (16%)" "IPR003135 (12.7%) IPR011761 (12.7%) IPR013815 (12.7%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.7%) ATP-grasp fold (12.7%) ATP-grasp fold, subdomain 1 (12.7%)" ISISQIKEVVQQAYEQVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" NMYNGTSGTELMGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.1.1.95 (75%) 1.1.1.290 (12.5%) 1.1.1.81 (12.5%)" "phosphoglycerate dehydrogenase (75%) 4-phosphoerythronate dehydrogenase (12.5%) hydroxypyruvate reductase (12.5%)" "GO:0051287 (49%) GO:0016616 (37.3%) GO:0004617 (11.8%)" "NAD binding (49%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (37.3%) phosphoglycerate dehydrogenase activity (11.8%)" "IPR006139 (33.8%) IPR036291 (33.8%) IPR006140 (32.5%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.8%) NAD(P)-binding domain superfamily (33.8%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (32.5%)" IGADDYLTKPFSMEELLLR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" AMTPVAWWMLHEETVYK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:1990451 (32.4%) GO:0009268 (0.4%) GO:0010447 (0.4%)" "GO:0042597 (33.8%) GO:0030288 (0.4%)" GO:0051082 (32.7%) "cellular stress response to acidic pH (32.4%) response to pH (0.4%) response to acidic pH (0.4%)" "periplasmic space (33.8%) outer membrane-bounded periplasmic space (0.4%)" unfolded protein binding (32.7%) "IPR010486 (33.8%) IPR038303 (33.8%) IPR028623 (32.4%)" "HNS-dependent expression A/B (33.8%) HNS-dependent expression A/B superfamily (33.8%) HNS-dependent expression B (32.4%)" GFGFITPADGSK root "GO:0010468 (0.3%) GO:0000917 (0%) GO:0006508 (0%)" "GO:0005829 (48.7%) GO:0005737 (0.6%) GO:0005886 (0%)" "GO:0003676 (29.2%) GO:0003677 (20.3%) GO:0001072 (0%)" "regulation of gene expression (0.3%) division septum assembly (0%) proteolysis (0%)" "cytosol (48.7%) cytoplasm (0.6%) plasma membrane (0%)" "nucleic acid binding (29.2%) DNA binding (20.3%) transcription antitermination factor activity, RNA binding (0%)" "IPR002059 (16.8%) IPR012340 (16.8%) IPR019844 (16.8%)" "Cold-shock protein Csp, DNA-binding (16.8%) Nucleic acid-binding, OB-fold (16.8%) Cold-shock domain, conserved site (16.8%)" AEFYSEVLTIVVDGK root "GO:0006412 (24.8%) GO:0000027 (0.1%) GO:0002181 (0.1%)" "GO:0022625 (24.5%) GO:0005840 (0.6%) GO:1990904 (0.3%)" "GO:0003735 (24.8%) GO:0008097 (24.6%) GO:0019843 (0.1%)" "translation (24.8%) ribosomal large subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic large ribosomal subunit (24.5%) ribosome (0.6%) ribonucleoprotein complex (0.3%)" "structural constituent of ribosome (24.8%) 5S rRNA binding (24.6%) rRNA binding (0.1%)" "IPR011035 (20.1%) IPR020056 (20.1%) IPR029751 (20.1%)" "Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (20.1%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (20.1%) Large ribosomal subunit protein bL25, L25 domain (20.1%)" IDFADKSVTENTR root 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.6%) GO:0005829 (17.6%) "GO:0004612 (17.6%) GO:0005524 (17.6%) GO:0046872 (16.9%)" gluconeogenesis (17.6%) cytosol (17.6%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.6%) ATP binding (17.6%) metal ion binding (16.9%)" "IPR001272 (25.3%) IPR013035 (25.2%) IPR015994 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.3%) Phosphoenolpyruvate carboxykinase, C-terminal (25.2%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (25%)" KTSEYGIQLR Bacteria Bacteria "GO:0006412 (19.9%) GO:0042274 (19.9%)" "GO:0015935 (19.9%) GO:0005840 (0.2%)" "GO:0019843 (20.1%) GO:0003735 (19.9%)" "translation (19.9%) ribosomal small subunit biogenesis (19.9%)" "small ribosomal subunit (19.9%) ribosome (0.2%)" "rRNA binding (20.1%) structural constituent of ribosome (19.9%)" "IPR001912 (16.9%) IPR002942 (16.8%) IPR005709 (16.8%)" "Small ribosomal subunit protein uS4, N-terminal (16.9%) RNA-binding S4 domain (16.8%) Small ribosomal subunit protein uS4, bacteria (16.8%)" TDKDSLFWGEQTIER root "GO:0005829 (25%) GO:0016020 (25%)" "GO:0003955 (25%) GO:0010181 (25%)" "cytosol (25%) membrane (25%)" "NAD(P)H dehydrogenase (quinone) activity (25%) FMN binding (25%)" "IPR025600 (98.3%) IPR005025 (0.4%) IPR008254 (0.4%)" "YccJ-like protein (98.3%) NADPH-dependent FMN reductase-like domain (0.4%) Flavodoxin/nitric oxide synthase (0.4%)" ILIHHFMLFSDEK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.5%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.5%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011260 (16.8%) IPR011263 (16.8%) IPR036603 (16.8%)" "RNA polymerase, alpha subunit, C-terminal (16.8%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) RNA polymerase, RBP11-like subunit (16.8%)" AKELNSDAIKEWK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (56.3%) IPR019734 (43.8%)" "Tetratricopeptide-like helical domain superfamily (56.3%) Tetratricopeptide repeat (43.8%)" KIIQALNGVEEIAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0000917 (14.3%) GO:0043093 (14.3%) GO:0051258 (14.3%)" "GO:0005737 (14.3%) GO:0032153 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%)" "division septum assembly (14.3%) FtsZ-dependent cytokinesis (14.3%) protein polymerization (14.3%)" "cytoplasm (14.3%) cell division site (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" NALAYLAYSDKVVEGSPK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0005829 (100%) cytosol (100%) IPR010292 (100%) Uncharacterised protein family CreA (100%) YSSLTLTPEK Pseudomonadati Bacteria Pseudomonadati "4.1.1.12 (84.6%) 2.6.1.1 (15.4%)" "aspartate 4-decarboxylase (84.6%) aspartate transaminase (15.4%)" GO:0006520 (27.9%) "GO:0030170 (27.9%) GO:0008483 (24.6%) GO:0047688 (11.5%)" amino acid metabolic process (27.9%) "pyridoxal phosphate binding (27.9%) transaminase activity (24.6%) aspartate 4-decarboxylase activity (11.5%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" EEFGGELIDGGPWLK root 1.1.1.42 (100%) isocitrate dehydrogenase (NADP(+)) (100%) "GO:0006099 (20.9%) GO:0006097 (18.6%) GO:0006979 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004450 (20.9%) GO:0000287 (18.4%) GO:0051287 (18.4%)" "tricarboxylic acid cycle (20.9%) glyoxylate cycle (18.6%) response to oxidative stress (0%)" "cytoplasm (0%) cytosol (0%)" "isocitrate dehydrogenase (NADP+) activity (20.9%) magnesium ion binding (18.4%) NAD binding (18.4%)" "IPR004439 (34.7%) IPR024084 (34.5%) IPR019818 (30.8%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (34.7%) Isopropylmalate dehydrogenase-like domain (34.5%) Isocitrate/isopropylmalate dehydrogenase, conserved site (30.8%)" DGVTLKEVHGTPEEEAALEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (37.5%) "GO:0016615 (25%) GO:0016616 (25%) GO:0030060 (12.5%)" malate metabolic process (37.5%) "malate dehydrogenase activity (25%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (25%) L-malate dehydrogenase (NAD+) activity (12.5%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" EAFPGDVFYLHSR root "7.1.2.2 (97.5%) 3.6.3.14 (2.4%) 7.1.1.9 (0.1%)" "H(+)-transporting two-sector ATPase (97.5%) Transferred entry: 7.1.2.2 (2.4%) cytochrome-c oxidase (0.1%)" "GO:0015986 (0.1%) GO:0006397 (0%) GO:0017004 (0%)" "GO:0045259 (19.6%) GO:0005886 (8.5%) GO:0005743 (6.8%)" "GO:0005524 (19.6%) GO:0046933 (19.6%) GO:0043531 (19.4%)" "proton motive force-driven ATP synthesis (0.1%) mRNA processing (0%) cytochrome complex assembly (0%)" "proton-transporting ATP synthase complex (19.6%) plasma membrane (8.5%) mitochondrial inner membrane (6.8%)" "ATP binding (19.6%) proton-transporting ATP synthase activity, rotational mechanism (19.6%) ADP binding (19.4%)" "IPR000194 (11%) IPR005294 (11%) IPR027417 (11%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11%) ATP synthase, F1 complex, alpha subunit (11%) P-loop containing nucleoside triphosphate hydrolase (11%)" LKNPDKEEYTSLLESTDCIKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (33.3%) "GO:0008448 (33.3%) GO:0046872 (33.3%)" N-acetylglucosamine catabolic process (33.3%) "N-acetylglucosamine-6-phosphate deacetylase activity (33.3%) metal ion binding (33.3%)" "IPR003764 (25%) IPR006680 (25%) IPR011059 (25%)" "N-acetylglucosamine-6-phosphate deacetylase (25%) Amidohydrolase-related (25%) Metal-dependent hydrolase, composite domain superfamily (25%)" VKATIESTEDTSVIEAMLNSPFKPVEGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033104 (100%) type VI protein secretion system complex (100%) IPR041408 (100%) Hemolysin coregulated protein (Hcp) TssD (100%) IVLVETSHTGNMGSVAR Bacteria Bacteria 2.1.1.200 (100%) tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (100%) "GO:0002128 (24.8%) GO:0032259 (0.3%)" GO:0005829 (24.8%) "GO:0003723 (24.8%) GO:0160206 (19.6%) GO:0008173 (5.2%)" "tRNA nucleoside ribose methylation (24.8%) methylation (0.3%)" cytosol (24.8%) "RNA binding (24.8%) tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase activity (19.6%) RNA methyltransferase activity (5.2%)" "IPR001537 (25%) IPR004384 (25%) IPR029026 (25%)" "tRNA/rRNA methyltransferase, SpoU type (25%) RNA methyltransferase TrmJ/LasT (25%) tRNA (guanine-N1-)-methyltransferase, N-terminal (25%)" FIEKNELPFTLIADTDKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) "GO:0034599 (25%) GO:0045454 (25%)" GO:0005737 (25%) GO:0008379 (25%) "cellular response to oxidative stress (25%) cell redox homeostasis (25%)" cytoplasm (25%) thioredoxin peroxidase activity (25%) "IPR000866 (20%) IPR013766 (20%) IPR024706 (20%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (20%) Thioredoxin domain (20%) Peroxiredoxin, AhpC-type (20%)" IDSGSQTIVGVNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20.1%) GO:0005737 (20.1%) "GO:0004494 (20.1%) GO:0031419 (20.1%) GO:0046872 (19.2%)" propionate metabolic process, methylmalonyl pathway (20.1%) cytoplasm (20.1%) "methylmalonyl-CoA mutase activity (20.1%) cobalamin binding (20.1%) metal ion binding (19.2%)" "IPR006099 (17.3%) IPR016176 (17.3%) IPR006098 (16.6%)" "Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (17.3%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (17.3%) Methylmalonyl-CoA mutase, alpha chain, catalytic (16.6%)" TDIPDADRDFYLER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (16.8%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (16.8%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" LISQLFGDREMVANATGCSSIYSGSVPSTPYTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.1 (76.9%) 1.2.7.- (15.4%) 1.2.1.51 (7.7%)" "pyruvate synthase (76.9%) With an iron-sulfur protein as acceptor (15.4%) pyruvate dehydrogenase (NADP(+)) (7.7%)" "GO:0006979 (14.6%) GO:0022900 (14.4%) GO:0044281 (11.6%)" "GO:0030976 (14.6%) GO:0005506 (14.4%) GO:0051539 (14.4%)" "response to oxidative stress (14.6%) electron transport chain (14.4%) small molecule metabolic process (11.6%)" "thiamine pyrophosphate binding (14.6%) iron ion binding (14.4%) 4 iron, 4 sulfur cluster binding (14.4%)" "IPR011766 (7.8%) IPR017896 (7.8%) IPR017900 (7.8%)" "Thiamine pyrophosphate enzyme, TPP-binding (7.8%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (7.8%) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (7.8%)" AFKNEYWNEKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.8.4.12 (58.8%) 1.8.4.11 (41.2%)" "peptide-methionine (R)-S-oxide reductase (58.8%) peptide-methionine (S)-S-oxide reductase (41.2%)" "GO:0006979 (20.7%) GO:0030091 (20.7%)" GO:0005737 (20.7%) "GO:0033743 (20.7%) GO:0008113 (15.2%) GO:0033744 (2.2%)" "response to oxidative stress (20.7%) protein repair (20.7%)" cytoplasm (20.7%) "peptide-methionine (R)-S-oxide reductase activity (20.7%) peptide-methionine (S)-S-oxide reductase activity (15.2%) L-methionine (S)-S-oxide reductase activity (2.2%)" "IPR002579 (22.4%) IPR011057 (22.4%) IPR028427 (22.4%)" "Peptide methionine sulphoxide reductase MrsB domain (22.4%) Mss4-like superfamily (22.4%) Peptide methionine sulfoxide reductase MsrB (22.4%)" SLDEINAVGHR Bacteria Bacteria 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.9%) GO:0006085 (16.4%)" GO:0005737 (16.4%) "GO:0005524 (16.9%) GO:0008776 (16.9%) GO:0000287 (16.4%)" "acetate metabolic process (16.9%) acetyl-CoA biosynthetic process (16.4%)" cytoplasm (16.4%) "ATP binding (16.9%) acetate kinase activity (16.9%) magnesium ion binding (16.4%)" "IPR000890 (25.1%) IPR023865 (25.1%) IPR043129 (25.1%)" "Aliphatic acid kinase, short-chain (25.1%) Aliphatic acid kinase, short-chain, conserved site (25.1%) ATPase, nucleotide binding domain (25.1%)" AENPDHFFQHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (73.1%) 1.2.7.- (23.1%) 1.2.1.51 (3.8%)" "pyruvate synthase (73.1%) With an iron-sulfur protein as acceptor (23.1%) pyruvate dehydrogenase (NADP(+)) (3.8%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (12%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.4%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (12%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.4%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" VVAGVANALAHKY root "GO:0042744 (7.6%) GO:0030185 (0.4%) GO:0042542 (0.4%)" "GO:0005833 (9%) GO:0031838 (7.7%) GO:0072562 (7.3%)" "GO:0019825 (9.2%) GO:0020037 (9.2%) GO:0046872 (9.2%)" "hydrogen peroxide catabolic process (7.6%) nitric oxide transport (0.4%) response to hydrogen peroxide (0.4%)" "hemoglobin complex (9%) haptoglobin-hemoglobin complex (7.7%) blood microparticle (7.3%)" "oxygen binding (9.2%) heme binding (9.2%) metal ion binding (9.2%)" "IPR000971 (20.2%) IPR009050 (20.2%) IPR012292 (20.2%)" "Globin (20.2%) Globin-like superfamily (20.2%) Globin/Protoglobin (20.2%)" SIHGNAGCNLINGGFETDKENPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR005184 (33.3%) IPR038670 (33.3%) IPR053147 (33.3%)" "Domain of unknown function DUF306, Meta/HslJ (33.3%) HslJ-like superfamily (33.3%) Heat shock protein HslJ-like (33.3%)" VMSGKQEQQPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.24.- (100%) Metalloendopeptidases (100%) GO:0016485 (25%) GO:0005886 (25%) "GO:0004222 (25%) GO:0046872 (25%)" protein processing (25%) plasma membrane (25%) "metalloendopeptidase activity (25%) metal ion binding (25%)" "IPR000718 (20%) IPR008753 (20%) IPR018497 (20%)" "Peptidase M13 (20%) Peptidase M13, N-terminal domain (20%) Peptidase M13, C-terminal domain (20%)" GIIHEYHDVFTGNVIAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 7.1.1.- (100%) Hydron translocation or charge separation linked to oxidoreductase reactions (100%) "GO:0005886 (14.5%) GO:0030964 (14.5%) GO:0005737 (13%)" "GO:0008137 (14.5%) GO:0048038 (14.5%) GO:0050136 (14.5%)" "plasma membrane (14.5%) NADH dehydrogenase complex (14.5%) cytoplasm (13%)" "NADH dehydrogenase (ubiquinone) activity (14.5%) quinone binding (14.5%) NADH dehydrogenase (quinone) (non-electrogenic) activity (14.5%)" "IPR001135 (14.3%) IPR001268 (14.3%) IPR020396 (14.3%)" "NADH-quinone oxidoreductase, subunit D (14.3%) NADH:ubiquinone oxidoreductase, 30kDa subunit (14.3%) NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site (14.3%)" HLGADTDVPAGDIGVGGR root "1.4.1.4 (96%) 1.4.1.2 (2%) 1.1.3.6 (0.7%)" "glutamate dehydrogenase (NADP(+)) (96%) glutamate dehydrogenase (2%) cholesterol oxidase (0.7%)" "GO:0006537 (24.8%) GO:0006520 (0.1%) GO:0006355 (0%)" "GO:0005829 (24.8%) GO:1990904 (0.1%) GO:0005634 (0%)" "GO:0004354 (24.9%) GO:0000166 (21.9%) GO:0004352 (2.4%)" "glutamate biosynthetic process (24.8%) amino acid metabolic process (0.1%) regulation of DNA-templated transcription (0%)" "cytosol (24.8%) ribonucleoprotein complex (0.1%) nucleus (0%)" "glutamate dehydrogenase (NADP+) activity (24.9%) nucleotide binding (21.9%) glutamate dehydrogenase (NAD+) activity (2.4%)" "IPR006097 (11.5%) IPR046346 (11.5%) IPR050724 (11.5%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.5%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.5%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.5%)" NGDIYPTHGIGPIANCMDINRGNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.2.1.49 (100%) alpha-N-acetylgalactosaminidase (100%) "GO:0000166 (50%) GO:0016798 (37.5%) GO:0008456 (12.5%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (37.5%) alpha-N-acetylgalactosaminidase activity (12.5%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" LGHGVWDLMFER root 2.1.1.33 (100%) tRNA (guanine(46)-N(7))-methyltransferase (100%) "GO:0032259 (0.4%) GO:0030488 (0.2%) GO:0036265 (0.2%)" "GO:0043527 (49.1%) GO:0005829 (0%)" "GO:0008176 (49.6%) GO:0008168 (0.4%)" "methylation (0.4%) tRNA methylation (0.2%) RNA (guanine-N7)-methylation (0.2%)" "tRNA methyltransferase complex (49.1%) cytosol (0%)" "tRNA (guanine(46)-N7)-methyltransferase activity (49.6%) methyltransferase activity (0.4%)" "IPR003358 (33.5%) IPR029063 (33.5%) IPR055361 (32.9%)" "tRNA (guanine-N-7) methyltransferase, Trmb type (33.5%) S-adenosyl-L-methionine-dependent methyltransferase superfamily (33.5%) tRNA (guanine-N(7)-)-methyltransferase TrmB, bacteria (32.9%)" ILYAHLYDESSTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" SGVAGLSGISSDMREIEAAVAAGNPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" GQNKFTEFINYEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0030145 (25%) GO:0070006 (25%)" proteolysis (25%) cytosol (25%) "manganese ion binding (25%) metalloaminopeptidase activity (25%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" TNDVAGDGTTTATVLAQAIIR Bacteria Bacteria 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (16.3%) GO:0009408 (1.7%) GO:0010447 (0.1%)" "GO:0005737 (15%) GO:0009986 (1.4%) GO:0042603 (1.3%)" "GO:0005524 (16.3%) GO:0140662 (16.3%) GO:0016853 (15.8%)" "protein refolding (16.3%) response to heat (1.7%) response to acidic pH (0.1%)" "cytoplasm (15%) cell surface (1.4%) capsule (1.3%)" "ATP binding (16.3%) ATP-dependent protein folding chaperone (16.3%) isomerase activity (15.8%)" "IPR001844 (16.9%) IPR002423 (16.9%) IPR027413 (16.9%)" "Chaperonin Cpn60/GroEL (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%) GroEL-like equatorial domain superfamily (16.9%)" AATDNGGSLIK root 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0042777 (18.5%) GO:0015986 (0.1%)" "GO:0045259 (19.4%) GO:0005886 (19.4%) GO:0005739 (0%)" "GO:0046933 (19.4%) GO:0005524 (18.5%) GO:0016787 (4.5%)" "proton motive force-driven plasma membrane ATP synthesis (18.5%) proton motive force-driven ATP synthesis (0.1%)" "proton-transporting ATP synthase complex (19.4%) plasma membrane (19.4%) mitochondrion (0%)" "proton-transporting ATP synthase activity, rotational mechanism (19.4%) ATP binding (18.5%) hydrolase activity (4.5%)" "IPR000131 (33.3%) IPR035968 (33.3%) IPR023632 (33%)" "ATP synthase, F1 complex, gamma subunit (33.3%) ATP synthase, F1 complex, gamma subunit superfamily (33.3%) ATP synthase, F1 complex, gamma subunit conserved site (33%)" TIQEQSGTDWSEMYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.3.1 (100%) phosphoribosylformylglycinamidine cyclo-ligase (100%) "GO:0006189 (16.5%) GO:0046084 (16.5%)" GO:0005829 (16.5%) "GO:0004637 (16.5%) GO:0004641 (16.5%) GO:0005524 (16.5%)" "'de novo' IMP biosynthetic process (16.5%) adenine biosynthetic process (16.5%)" cytosol (16.5%) "phosphoribosylamine-glycine ligase activity (16.5%) phosphoribosylformylglycinamidine cyclo-ligase activity (16.5%) ATP binding (16.5%)" "IPR004733 (20%) IPR010918 (20%) IPR016188 (20%)" "Phosphoribosylformylglycinamidine cyclo-ligase (20%) PurM-like, C-terminal domain (20%) PurM-like, N-terminal domain (20%)" SAGIITGLPDAYGR Bacteria Bacteria 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006006 (32.3%) GO:0005829 (33%) "GO:0008861 (33%) GO:0016829 (1.1%) GO:0016746 (0.5%)" glucose metabolic process (32.3%) cytosol (33%) "formate C-acetyltransferase activity (33%) lyase activity (1.1%) acyltransferase activity (0.5%)" "IPR004184 (20.2%) IPR050244 (20.2%) IPR001150 (19.8%)" "Pyruvate formate lyase domain (20.2%) Autonomous Glycyl Radical Cofactor (20.2%) Glycine radical domain (19.8%)" AEWTQFSVPFKPVGDNKYDANKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR024311 (25%) IPR025112 (25%) IPR032186 (25%)" "Lipocalin-like domain (25%) Putative carbohydrate metabolism domain (25%) Domain of unknown function DUF5018 (25%)" LLVLDVDGTLLNDKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.-.-.- (100%) Hydrolases (100%) GO:0005829 (25%) "GO:0000287 (25%) GO:0016289 (25%) GO:0016791 (25%)" cytosol (25%) "magnesium ion binding (25%) acyl-CoA hydrolase activity (25%) phosphatase activity (25%)" "IPR000150 (14.3%) IPR003736 (14.3%) IPR006379 (14.3%)" "Cof family (14.3%) Phenylacetic acid degradation-related domain (14.3%) HAD-superfamily hydrolase, subfamily IIB (14.3%)" KTFAEKPAEFDPRK Pseudomonadati Bacteria Pseudomonadati 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.3%) GO:0030388 (24.3%) GO:0005975 (0.7%)" "GO:0008270 (25%) GO:0004332 (24.3%) GO:0016829 (0.7%)" "glycolytic process (24.3%) fructose 1,6-bisphosphate metabolic process (24.3%) carbohydrate metabolic process (0.7%)" "zinc ion binding (25%) fructose-bisphosphate aldolase activity (24.3%) lyase activity (0.7%)" "IPR000771 (25.2%) IPR013785 (25.2%) IPR050246 (25.2%)" "Fructose-bisphosphate aldolase, class-II (25.2%) Aldolase-type TIM barrel (25.2%) Class II Fructose-bisphosphate Aldolase (25.2%)" QEDLEGLKTTEGLPGEFPYVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (24.5%) "GO:0004494 (25.5%) GO:0031419 (25.5%) GO:0046872 (24.5%)" lactate fermentation to propionate and acetate (24.5%) "methylmalonyl-CoA mutase activity (25.5%) cobalamin binding (25.5%) metal ion binding (24.5%)" "IPR006099 (25.5%) IPR016176 (25.5%) IPR004608 (24.5%)" "Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25.5%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25.5%) Methylmalonyl-CoA mutase, small subunit (24.5%)" VFNHTGKPQAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.15 (100%) glutamate decarboxylase (100%) GO:0006538 (24.6%) GO:0005829 (24.6%) "GO:0004351 (24.6%) GO:0030170 (24.6%) GO:0016829 (1.6%)" L-glutamate catabolic process (24.6%) cytosol (24.6%) "glutamate decarboxylase activity (24.6%) pyridoxal phosphate binding (24.6%) lyase activity (1.6%)" "IPR002129 (25%) IPR010107 (25%) IPR015421 (25%)" "Pyridoxal phosphate-dependent decarboxylase (25%) Glutamate decarboxylase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%)" LVECGHDVVIFLDSITR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.6.4.- (99.2%) 3.6.1.- (0.8%)" "Acting on ATP; involved in cellular and subcellular movement (99.2%) In phosphorus-containing anhydrides (0.8%)" GO:0006353 (14.5%) GO:0005829 (13.2%) "GO:0003723 (14.5%) GO:0005524 (14.5%) GO:0008186 (14.5%)" DNA-templated transcription termination (14.5%) cytosol (13.2%) "RNA binding (14.5%) ATP binding (14.5%) ATP-dependent activity, acting on RNA (14.5%)" "IPR000194 (10.2%) IPR004665 (10.2%) IPR027417 (10.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.2%) Transcription termination factor Rho (10.2%) P-loop containing nucleoside triphosphate hydrolase (10.2%)" LIVDDNPTVEELKAWIPLSGLPVKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR006504 (33.3%) IPR006660 (33.3%) IPR036249 (33.3%)" "Transcriptional regulator Spx/MgsR (33.3%) Arsenate reductase-like (33.3%) Thioredoxin-like superfamily (33.3%)" SDVLMICETWKDAESLSAHEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.-.-.- (100%) Oxidoreductases (100%) "GO:0004497 (76.9%) GO:0003824 (23.1%)" "monooxygenase activity (76.9%) catalytic activity (23.1%)" "IPR007138 (33.3%) IPR011008 (33.3%) IPR050744 (33.3%)" "Antibiotic biosynthesis monooxygenase domain (33.3%) Dimeric alpha-beta barrel (33.3%) AI-2 Signaling Cycle Isomerase LsrG (33.3%)" IGKEMDLFMFTDMVGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (17%) GO:0005737 (16.3%) "GO:0004829 (17%) GO:0005524 (17%) GO:0000049 (16.3%)" threonyl-tRNA aminoacylation (17%) cytoplasm (16.3%) "threonine-tRNA ligase activity (17%) ATP binding (17%) tRNA binding (16.3%)" "IPR012947 (8%) IPR018163 (8%) IPR045864 (8%)" "Threonyl/alanyl tRNA synthetase, SAD (8%) Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily (8%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (8%)" TTLGDIEELAALK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (23.9%) "GO:0022627 (22.8%) GO:0005840 (1.5%) GO:0005737 (1%)" "GO:0003729 (23.9%) GO:0003735 (23.9%) GO:0003676 (1.5%)" translation (23.9%) "cytosolic small ribosomal subunit (22.8%) ribosome (1.5%) cytoplasm (1%)" "mRNA binding (23.9%) structural constituent of ribosome (23.9%) nucleic acid binding (1.5%)" "IPR003029 (25.9%) IPR012340 (25.9%) IPR050437 (24.4%)" "S1 domain (25.9%) Nucleic acid-binding, OB-fold (25.9%) Small ribosomal subunit protein bS1-like (24.4%)" EQENPAAFLAEKEAEYTK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0015977 (22.8%) GO:0009317 (22.8%) "GO:0003989 (22.8%) GO:0004658 (22.8%) GO:0016740 (8.8%)" carbon fixation (22.8%) acetyl-CoA carboxylase complex (22.8%) "acetyl-CoA carboxylase activity (22.8%) propionyl-CoA carboxylase activity (22.8%) transferase activity (8.8%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" GSMYKDVVPEFEKIPEVVECHFTTGPYTMLIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043200 (32.7%) GO:0005829 (32.7%) GO:0043565 (34.5%) response to amino acid (32.7%) cytosol (32.7%) sequence-specific DNA binding (34.5%) "IPR011008 (17.1%) IPR019887 (17.1%) IPR000485 (16.2%)" "Dimeric alpha-beta barrel (17.1%) Transcription regulator AsnC/Lrp, ligand binding domain (17.1%) AsnC-type HTH domain (16.2%)" QVLPAHDPDCFLCAGNVR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.7.7.12 (100%) UDP-glucose--hexose-1-phosphate uridylyltransferase (100%) GO:0033499 (24.8%) "GO:0005737 (24.8%) GO:0005829 (0.2%)" "GO:0008108 (24.8%) GO:0008270 (24.8%) GO:0016779 (0.3%)" galactose catabolic process via UDP-galactose, Leloir pathway (24.8%) "cytoplasm (24.8%) cytosol (0.2%)" "UDP-glucose:hexose-1-phosphate uridylyltransferase activity (24.8%) zinc ion binding (24.8%) nucleotidyltransferase activity (0.3%)" "IPR001937 (20.8%) IPR005849 (20.8%) IPR036265 (20.8%)" "Galactose-1-phosphate uridyl transferase, class I (20.8%) Galactose-1-phosphate uridyl transferase, N-terminal (20.8%) HIT-like superfamily (20.8%)" VQFNNAIGPYKGGIR Bacteria Bacteria "1.4.1.4 (91.1%) 1.4.1.2 (7.8%) 1.4.1.- (1.1%)" "glutamate dehydrogenase (NADP(+)) (91.1%) glutamate dehydrogenase (7.8%) With NAD(+) or NADP(+) as acceptor (1.1%)" GO:0006537 (24.3%) "GO:0005829 (24.2%) GO:0009986 (0.8%)" "GO:0004354 (24.3%) GO:0000166 (21.1%) GO:0004352 (5.3%)" glutamate biosynthetic process (24.3%) "cytosol (24.2%) cell surface (0.8%)" "glutamate dehydrogenase (NADP+) activity (24.3%) nucleotide binding (21.1%) glutamate dehydrogenase (NAD+) activity (5.3%)" "IPR006097 (11.6%) IPR046346 (11.6%) IPR050724 (11.6%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.6%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.6%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.6%)" GKYDICVLDVMMPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" LNRAEYDSLEKELGY Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) ANYSELFPSEEEAADRWFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR027848 (100%) Protein of unknown function DUF4494 (100%) VVVFSPHPDDDVISMGGTIRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.3%) GO:0006044 (31.9%)" "GO:0004342 (32.7%) GO:0016853 (3.2%)" "carbohydrate metabolic process (32.3%) N-acetylglucosamine metabolic process (31.9%)" "glucosamine-6-phosphate deaminase activity (32.7%) isomerase activity (3.2%)" "IPR003737 (15.3%) IPR052960 (15.3%) IPR024078 (15.1%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (15.3%) Glucosamine-6-phosphate deaminase-like (15.3%) Putative deacetylase LmbE-like domain superfamily (15.1%)" KGAPAADVSTTVVSTVSANNSGSSPVPSAEVQKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0005737 (33.3%) "GO:0016407 (33.3%) GO:0031405 (33.3%)" cytoplasm (33.3%) "acetyltransferase activity (33.3%) lipoic acid binding (33.3%)" "IPR000089 (12.5%) IPR001078 (12.5%) IPR003016 (12.5%)" "Biotin/lipoyl attachment (12.5%) 2-oxoacid dehydrogenase acyltransferase, catalytic domain (12.5%) 2-oxo acid dehydrogenase, lipoyl-binding site (12.5%)" MVCVDPNDIPAIAIVDAELMYTLPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.77 (100%) lactaldehyde reductase (100%) "GO:0004022 (39.1%) GO:0046872 (39.1%) GO:0008912 (21.7%)" "alcohol dehydrogenase (NAD+) activity (39.1%) metal ion binding (39.1%) lactaldehyde reductase activity (21.7%)" "IPR001670 (20%) IPR013460 (20%) IPR018211 (20%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (20%) Lactaldehyde reductase (20%) Alcohol dehydrogenase, iron-type, conserved site (20%)" VKLPLTLDPVR root 2.3.1.274 (100%) phosphate acyltransferase (100%) "GO:0042254 (49.2%) GO:0006633 (0.1%) GO:0008654 (0.1%)" "GO:0005829 (49.7%) GO:0005840 (0.3%) GO:0005737 (0.1%)" "GO:0005524 (0.1%) GO:0008757 (0.1%) GO:0016747 (0.1%)" "ribosome biogenesis (49.2%) fatty acid biosynthetic process (0.1%) phospholipid biosynthetic process (0.1%)" "cytosol (49.7%) ribosome (0.3%) cytoplasm (0.1%)" "ATP binding (0.1%) S-adenosylmethionine-dependent methyltransferase activity (0.1%) acyltransferase activity, transferring groups other than amino-acyl groups (0.1%)" "IPR039255 (49.6%) IPR003772 (49.3%) IPR000522 (0.1%)" "Large ribosomal RNA subunit accumulation protein YceD, bacteria (49.6%) Large ribosomal RNA subunit accumulation protein YceD (49.3%) ABC transporter, permease protein, BtuC-like (0.1%)" VIDIDLNAPFIVSK Bacteria Bacteria "1.1.1.69 (93.3%) 1.1.1.125 (4.2%) 1.1.1.127 (1.7%)" "gluconate 5-dehydrogenase (93.3%) 2-deoxy-D-gluconate 3-dehydrogenase (4.2%) 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase (1.7%)" GO:0008206 (38%) GO:0016020 (3.2%) "GO:0008874 (32.4%) GO:0016491 (17.1%) GO:0016616 (6.9%)" bile acid metabolic process (38%) membrane (3.2%) "gluconate 5-dehydrogenase activity (32.4%) oxidoreductase activity (17.1%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (6.9%)" "IPR002347 (33.4%) IPR036291 (33.4%) IPR020904 (33.2%)" "Short-chain dehydrogenase/reductase SDR (33.4%) NAD(P)-binding domain superfamily (33.4%) Short-chain dehydrogenase/reductase, conserved site (33.2%)" DGKVAYTELVPEITQEPDYEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.11.1.24 (94.4%) 1.11.1.- (5.6%)" "thioredoxin-dependent peroxiredoxin (94.4%) Peroxidases (5.6%)" GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" MLEFSGACAGCGETPYIK Congzhengia minquanensis Bacteria Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Congzhengia Congzhengia minquanensis 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0006979 (16.7%) GO:0022900 (16.7%)" "GO:0005506 (16.7%) GO:0016903 (16.7%) GO:0030976 (16.7%)" "response to oxidative stress (16.7%) electron transport chain (16.7%)" "iron ion binding (16.7%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (16.7%) thiamine pyrophosphate binding (16.7%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" IKEFTAEEQEKSEEIEKNTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" VLTKQDIIEIIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.8%) IPR007121 (7.8%) IPR007642 (7.8%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.8%) RNA polymerase, beta subunit, conserved site (7.8%) RNA polymerase Rpb2, domain 2 (7.8%)" ILNIIVVQKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0003700 (50%) GO:0043565 (50%)" "DNA-binding transcription factor activity (50%) sequence-specific DNA binding (50%)" "IPR009057 (50%) IPR018060 (50%)" "Homedomain-like superfamily (50%) AraC-like, DNA binding HTH domain (50%)" DADLFFLSLK Bacteria Bacteria "GO:0005524 (25.3%) GO:0008270 (25.3%) GO:0016787 (25.3%)" "ATP binding (25.3%) zinc ion binding (25.3%) hydrolase activity (25.3%)" "IPR000330 (10.3%) IPR001650 (10.3%) IPR007527 (10.3%)" "SNF2, N-terminal (10.3%) Helicase, C-terminal domain-like (10.3%) Zinc finger, SWIM-type (10.3%)" ADVLPLDSNHVNTEEAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "6.1.1.12 (98.1%) 6.1.1.23 (1.2%) 6.1.1.- (0.6%)" "aspartate--tRNA ligase (98.1%) aspartate--tRNA(Asn) ligase (1.2%) Ligases forming aminoacyl-tRNA and related compounds (0.6%)" GO:0006422 (20%) "GO:0005737 (19.8%) GO:0005829 (0.1%)" "GO:0004815 (20%) GO:0005524 (20%) GO:0003676 (19.3%)" aspartyl-tRNA aminoacylation (20%) "cytoplasm (19.8%) cytosol (0.1%)" "aspartate-tRNA ligase activity (20%) ATP binding (20%) nucleic acid binding (19.3%)" "IPR004364 (9.4%) IPR045864 (9.4%) IPR002312 (9.3%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (9.4%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (9.4%) Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.3%)" VMNHPNIK root "1.8.1.9 (88.2%) 2.4.1.17 (11.8%)" "thioredoxin-disulfide reductase (NADPH) (88.2%) glucuronosyltransferase (11.8%)" "GO:0019430 (27.5%) GO:0015012 (2%) GO:0050650 (2%)" "GO:0005737 (27.5%) GO:0016020 (5.9%)" "GO:0004791 (27.5%) GO:0008194 (2%) GO:0015020 (2%)" "removal of superoxide radicals (27.5%) heparan sulfate proteoglycan biosynthetic process (2%) chondroitin sulfate proteoglycan biosynthetic process (2%)" "cytoplasm (27.5%) membrane (5.9%)" "thioredoxin-disulfide reductase (NADPH) activity (27.5%) UDP-glycosyltransferase activity (2%) glucuronosyltransferase activity (2%)" "IPR036188 (18.5%) IPR050097 (18.5%) IPR005982 (17.3%)" "FAD/NAD(P)-binding domain superfamily (18.5%) Ferredoxin--NADP reductase type 2 (18.5%) Thioredoxin reductase (17.3%)" LASNSLIEAVVYADAAAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.3.16 (100%) L-aspartate oxidase (100%) GO:0034628 (33.7%) GO:0005737 (32.7%) GO:0008734 (33.7%) 'de novo' NAD+ biosynthetic process from L-aspartate (33.7%) cytoplasm (32.7%) L-aspartate oxidase activity (33.7%) "IPR003953 (16.7%) IPR005288 (16.7%) IPR015939 (16.7%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (16.7%) L-aspartate oxidase (16.7%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (16.7%)" GTIGGSPEDGLNPLAIVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "5.4.2.10 (71.4%) 5.4.2.2 (28.6%)" "phosphoglucosamine mutase (71.4%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (28.6%)" "GO:0005975 (13.7%) GO:0006048 (13.7%) GO:0009252 (13.7%)" GO:0005829 (13.7%) "GO:0000287 (13.7%) GO:0004615 (13.7%) GO:0008966 (13.7%)" "carbohydrate metabolic process (13.7%) UDP-N-acetylglucosamine biosynthetic process (13.7%) peptidoglycan biosynthetic process (13.7%)" cytosol (13.7%) "magnesium ion binding (13.7%) phosphomannomutase activity (13.7%) phosphoglucosamine mutase activity (13.7%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" LLNNMYVYEGTEHKHEAQQPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006412 (20%) GO:0017148 (20%)" GO:0022625 (20%) "GO:0003729 (20%) GO:0003735 (20%)" "translation (20%) negative regulation of translation (20%)" cytosolic large ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%)" "IPR005822 (25%) IPR005823 (25%) IPR023563 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13, conserved site (25%)" ENAEIYASLPEGVAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" AAQGNNFGTVLIPEGLIEFIPAMKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.4%) GO:0006002 (14.1%)" GO:0005829 (14.4%) "GO:0003872 (14.4%) GO:0047334 (14.4%) GO:0005524 (14.1%)" "response to glucose (14.4%) fructose 6-phosphate metabolic process (14.1%)" cytosol (14.4%) "6-phosphofructokinase activity (14.4%) diphosphate-fructose-6-phosphate 1-phosphotransferase activity (14.4%) ATP binding (14.1%)" "IPR035966 (25.4%) IPR000023 (24.9%) IPR011183 (24.9%)" "Phosphofructokinase superfamily (25.4%) Phosphofructokinase domain (24.9%) Pyrophosphate-dependent phosphofructokinase PfpB (24.9%)" TLEVAKDYINNSVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola FLSGDYEGMCDEIEELKAVCGEHHLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (25%) GO:0016052 (25%)" GO:0005737 (25%) GO:0004139 (25%) "deoxyribonucleotide catabolic process (25%) carbohydrate catabolic process (25%)" cytoplasm (25%) deoxyribose-phosphate aldolase activity (25%) "IPR002915 (33.3%) IPR011343 (33.3%) IPR013785 (33.3%)" "DeoC/FbaB/LacD aldolase (33.3%) Deoxyribose-phosphate aldolase (33.3%) Aldolase-type TIM barrel (33.3%)" QQYPDVQIVGNNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0009055 (22.7%) GO:0010181 (22.7%) GO:0016491 (22.7%)" "electron transfer activity (22.7%) FMN binding (22.7%) oxidoreductase activity (22.7%)" "IPR001226 (14.3%) IPR001279 (14.3%) IPR008254 (14.3%)" "Flavodoxin, conserved site (14.3%) Metallo-beta-lactamase (14.3%) Flavodoxin/nitric oxide synthase (14.3%)" FLHLEPVAMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.1.1.1 (100%) alanine racemase (100%) GO:0030632 (19.7%) GO:0005829 (1.3%) "GO:0005524 (19.7%) GO:0008784 (19.7%) GO:0016881 (19.7%)" D-alanine biosynthetic process (19.7%) cytosol (1.3%) "ATP binding (19.7%) alanine racemase activity (19.7%) acid-amino acid ligase activity (19.7%)" "IPR000821 (10.1%) IPR001608 (10.1%) IPR009006 (10.1%)" "Alanine racemase (10.1%) Alanine racemase, N-terminal (10.1%) Alanine racemase/group IV decarboxylase, C-terminal (10.1%)" MVNDPNFKEQYIQDYLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (46.2%) IPR019734 (46.2%) IPR013105 (7.7%)" "Tetratricopeptide-like helical domain superfamily (46.2%) Tetratricopeptide repeat (46.2%) Tetratricopeptide repeat 2 (7.7%)" AMLEDIAVLTGGTVISEEKGLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" AALMDPAYMQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis KNPVMLYAGHNIGEDYLYELSEVLKGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" SLIPLDKEAIFASVRK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (26.3%) GO:0003863 (7%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (26.3%) branched-chain 2-oxo acid dehydrogenase activity (7%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" EVATTLGIPREEVQNYGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.3 (100%) formate--tetrahydrofolate ligase (100%) GO:0035999 (33.3%) "GO:0004329 (33.3%) GO:0005524 (33.3%)" tetrahydrofolate interconversion (33.3%) "formate-tetrahydrofolate ligase activity (33.3%) ATP binding (33.3%)" "IPR000559 (33.3%) IPR020628 (33.3%) IPR027417 (33.3%)" "Formate-tetrahydrofolate ligase, FTHFS (33.3%) Formate-tetrahydrofolate ligase, FTHFS, conserved site (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" YVDENGETKTWTGQGR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0045892 (0%) GO:0006355 (0%) GO:0006417 (0%)" "GO:0005829 (11%) GO:0032993 (11%) GO:0009295 (11%)" "GO:0000976 (11%) GO:0001217 (11%) GO:0003680 (11%)" "negative regulation of DNA-templated transcription (0%) regulation of DNA-templated transcription (0%) regulation of translation (0%)" "cytosol (11%) protein-DNA complex (11%) nucleoid (11%)" "transcription cis-regulatory region binding (11%) DNA-binding transcription repressor activity (11%) minor groove of adenine-thymine-rich DNA binding (11%)" "IPR027444 (20.1%) IPR037150 (20.1%) IPR001801 (19.9%)" "DNA-binding protein H-NS-like, C-terminal domain (20.1%) Histone-like protein H-NS, C-terminal domain superfamily (20.1%) DNA-binding protein H-NS-like (19.9%)" ELPGFPIVLHGSSSVPEEEVATINQFGGALK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (25%) GO:0030388 (25%)" "GO:0004332 (25%) GO:0008270 (25%)" "glycolytic process (25%) fructose 1,6-bisphosphate metabolic process (25%)" "fructose-bisphosphate aldolase activity (25%) zinc ion binding (25%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" FNSEGGDRPQR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" EALANIAATTLENIR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.28 (100%) D-lactate dehydrogenase (100%) "GO:0008720 (50%) GO:0051287 (50%)" "D-lactate dehydrogenase (NAD+) activity (50%) NAD binding (50%)" "IPR006139 (25%) IPR006140 (25%) IPR029753 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (25%)" YRAEELAEER Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "3.4.25.2 (58.3%) 3.4.21.- (41.7%)" "HslU--HslV peptidase (58.3%) Serine endopeptidases (41.7%)" "GO:0051603 (14.4%) GO:0043335 (13.8%) GO:0006508 (0.1%)" "GO:0009376 (14.4%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0005524 (14.5%) GO:0008233 (14.4%) GO:0016887 (14.4%)" "proteolysis involved in protein catabolic process (14.4%) protein unfolding (13.8%) proteolysis (0.1%)" "HslUV protease complex (14.4%) cytosol (0%) membrane (0%)" "ATP binding (14.5%) peptidase activity (14.4%) ATP hydrolysis activity (14.4%)" "IPR003959 (16.9%) IPR027417 (16.9%) IPR050052 (16.9%)" "ATPase, AAA-type, core (16.9%) P-loop containing nucleoside triphosphate hydrolase (16.9%) ATP-dependent Clp protease ATP-binding subunit ClpX (16.9%)" AIDGVKDALSMTIPVGTGIHR Bacteria Bacteria 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25.3%) GO:0019877 (25.3%)" "GO:0047850 (25.3%) GO:0000166 (24%)" "lysine biosynthetic process via diaminopimelate (25.3%) diaminopimelate biosynthetic process (25.3%)" "diaminopimelate dehydrogenase activity (25.3%) nucleotide binding (24%)" "IPR010190 (25.3%) IPR032094 (25.3%) IPR036291 (25.3%)" "Diaminopimelate dehydrogenase, Ddh (25.3%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25.3%) NAD(P)-binding domain superfamily (25.3%)" YSWGPEGGAPTIEEIPDSEKEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" EGQAEPDQFMDNNDLERER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0000027 (10%) GO:0009409 (10%) GO:0010467 (10%)" "GO:0005829 (10%) GO:1990904 (10%)" "GO:0000049 (10%) GO:0003924 (10%) GO:0005525 (10%)" "ribosomal large subunit assembly (10%) response to cold (10%) gene expression (10%)" "cytosol (10%) ribonucleoprotein complex (10%)" "tRNA binding (10%) GTPase activity (10%) GTP binding (10%)" "IPR000640 (6.7%) IPR000795 (6.7%) IPR004161 (6.7%)" "Elongation factor EFG, domain V-like (6.7%) Translational (tr)-type GTP-binding domain (6.7%) Translation elongation factor EFTu-like, domain 2 (6.7%)" ELEKYFPSSILQFIVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022627 (25%) "GO:0003723 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "RNA binding (25%) structural constituent of ribosome (25%)" "IPR000754 (20%) IPR014721 (20%) IPR020568 (20%)" "Small ribosomal subunit protein uS9 (20%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (20%) Ribosomal protein uS5 domain 2-type superfamily (20%)" IETSPEDLAGMAVAEGILTAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0016301 (25.1%) GO:0050242 (25.1%) GO:0046872 (24.9%)" "kinase activity (25.1%) pyruvate, phosphate dikinase activity (25.1%) metal ion binding (24.9%)" "IPR008279 (10.1%) IPR010121 (10.1%) IPR018274 (10.1%)" "PEP-utilising enzyme, mobile domain (10.1%) Pyruvate, phosphate dikinase (10.1%) PEP-utilising enzyme, active site (10.1%)" DGISYTFSIVPNALGKDDEVRK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (30.2%) GO:0005975 (0%) GO:0044814 (0%)" "GO:0005829 (32.1%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0008861 (32.2%) GO:0016829 (4.9%) GO:0016746 (0.4%)" "glucose metabolic process (30.2%) carbohydrate metabolic process (0%) pyruvate fermentation via PFL (0%)" "cytosol (32.1%) cytoplasm (0.1%) membrane (0%)" "formate C-acetyltransferase activity (32.2%) lyase activity (4.9%) acyltransferase activity (0.4%)" "IPR001150 (20.3%) IPR050244 (20.3%) IPR019777 (20.2%)" "Glycine radical domain (20.3%) Autonomous Glycyl Radical Cofactor (20.3%) Formate C-acetyltransferase glycine radical, conserved site (20.2%)" VDESLEKLADEVDESAKEAEK root "GO:0006457 (0.1%) GO:0006974 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (18%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0005524 (20%) GO:0016887 (20%) GO:0051082 (20%)" "protein folding (0.1%) DNA damage response (0.1%) response to heat (0.1%)" "cytoplasm (18%) cytosol (0.1%) plasma membrane (0.1%)" "ATP binding (20%) ATP hydrolysis activity (20%) unfolded protein binding (20%)" "IPR001404 (15.7%) IPR037196 (15.7%) IPR020568 (15.2%)" "Heat shock protein Hsp90 family (15.7%) HSP90, C-terminal domain (15.7%) Ribosomal protein uS5 domain 2-type superfamily (15.2%)" DTYADPAQWDEKAKDLAAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.5%) GO:0005829 (18.5%) "GO:0004612 (18.5%) GO:0005524 (18.5%) GO:0046872 (18.5%)" gluconeogenesis (18.5%) cytosol (18.5%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.5%) ATP binding (18.5%) metal ion binding (18.5%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" EGNTVPMMDSNGNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0042026 (33.3%) GO:0005737 (33.3%) GO:0003755 (33.3%) protein refolding (33.3%) cytoplasm (33.3%) peptidyl-prolyl cis-trans isomerase activity (33.3%) "IPR001179 (37.7%) IPR046357 (37.7%) IPR048261 (24.6%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (37.7%) Peptidyl-prolyl cis-trans isomerase domain superfamily (37.7%) PPIase chaperone SlpA/SlyD-like, insertion domain superfamily (24.6%)" WTQPGNIVTNGAYTLKDWVVNER root "GO:0015833 (21%) GO:0015031 (18.2%) GO:0006857 (0.1%)" "GO:0030288 (20.8%) GO:0043190 (18%) GO:0005886 (0.1%)" "GO:1904680 (21%) GO:1900750 (0.1%)" "peptide transport (21%) protein transport (18.2%) oligopeptide transport (0.1%)" "outer membrane-bounded periplasmic space (20.8%) ATP-binding cassette (ABC) transporter complex (18%) plasma membrane (0.1%)" "peptide transmembrane transporter activity (21%) oligopeptide binding (0.1%)" "IPR000914 (26.3%) IPR039424 (26.2%) IPR023765 (24.4%)" "Solute-binding protein family 5 domain (26.3%) Solute-binding protein family 5 (26.2%) Solute-binding protein family 5, conserved site (24.4%)" MKCPIIGINDSGGAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.1.3.1 (50%) 6.-.-.- (50%)" "methylmalonyl-CoA carboxytransferase (50%) Ligases (50%)" GO:0015977 (22.6%) GO:0009317 (22.6%) "GO:0004658 (23.7%) GO:0003989 (22.6%) GO:0016740 (6.5%)" carbon fixation (22.6%) acetyl-CoA carboxylase complex (22.6%) "propionyl-CoA carboxylase activity (23.7%) acetyl-CoA carboxylase activity (22.6%) transferase activity (6.5%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" YYMNTYGFHTIHGR root "1.2.7.3 (66%) 1.2.-.- (13.2%) 1.2.7.11 (9.4%)" "2-oxoglutarate synthase (66%) Acting on the aldehyde or oxo group of donors (13.2%) 2-oxoacid oxidoreductase (ferredoxin) (9.4%)" "GO:0044281 (29.4%) GO:0006979 (0.2%)" "GO:0030976 (34.8%) GO:0016625 (28.9%) GO:0047553 (5.6%)" "small molecule metabolic process (29.4%) response to oxidative stress (0.2%)" "thiamine pyrophosphate binding (34.8%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (28.9%) 2-oxoglutarate synthase activity (5.6%)" "IPR011766 (30.9%) IPR029061 (30.9%) IPR051457 (30.8%)" "Thiamine pyrophosphate enzyme, TPP-binding (30.9%) Thiamin diphosphate-binding fold (30.9%) 2-oxoacid:ferredoxin oxidoreductase (30.8%)" EYPNFYLTDIEALDAEKTSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (2.1%) "GO:0005840 (47.9%) GO:1990904 (47.9%)" GO:0070180 (2.1%) translation (2.1%) "ribosome (47.9%) ribonucleoprotein complex (47.9%)" large ribosomal subunit rRNA binding (2.1%) "IPR001790 (32.9%) IPR043141 (32.9%) IPR047865 (32.9%)" "Large ribosomal subunit protein uL10 (32.9%) Large ribosomal subunit protein uL10-like domain superfamily (32.9%) Large ribosomal subunit protein uL10, bacteria/organella (32.9%)" CDMVDDEELLELVEMEVR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0%) GO:0070125 (0%) GO:0046677 (0%)" "GO:0005829 (17.3%) GO:0032045 (8.3%) GO:0005886 (0.4%)" "GO:0003746 (17.8%) GO:0005525 (17.6%) GO:0003924 (17.6%)" "translational elongation (0%) mitochondrial translational elongation (0%) response to antibiotic (0%)" "cytosol (17.3%) guanyl-nucleotide exchange factor complex (8.3%) plasma membrane (0.4%)" "translation elongation factor activity (17.8%) GTP binding (17.6%) GTPase activity (17.6%)" "IPR050055 (9.8%) IPR000795 (9.8%) IPR027417 (9.8%)" "Elongation factor Tu GTPase (9.8%) Translational (tr)-type GTP-binding domain (9.8%) P-loop containing nucleoside triphosphate hydrolase (9.8%)" KALENIEGDFSDLNVALK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" LFYDTIKGGDYR root "1.3.5.1 (98.8%) 1.3.5.4 (1.1%) 1.3.99.1 (0.1%)" "succinate dehydrogenase (98.8%) Transferred entry: 1.3.5.1 (1.1%) Deleted entry (0.1%)" "GO:0009061 (19.9%) GO:0006633 (0%)" "GO:0005886 (19.9%) GO:0009317 (0%)" "GO:0009055 (19.9%) GO:0050660 (19.9%) GO:0000104 (16%)" "anaerobic respiration (19.9%) fatty acid biosynthetic process (0%)" "plasma membrane (19.9%) acetyl-CoA carboxylase complex (0%)" "electron transfer activity (19.9%) flavin adenine dinucleotide binding (19.9%) succinate dehydrogenase activity (16%)" "IPR003953 (14.4%) IPR030664 (14.4%) IPR036188 (14.4%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.4%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (14.4%) FAD/NAD(P)-binding domain superfamily (14.4%)" FEFRPLEPGYGITIGNALRR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.7%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.7%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011260 (16.7%) IPR011262 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.7%) DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" KGCTNAAEAAEAIGIGLQAFCIAGSVADDRK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR025964 (100%) GGGtGRT protein (100%) TLGECEIYDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.1.1.29 (75%) 1.1.1.290 (25%)" "glycerate dehydrogenase (75%) 4-phosphoerythronate dehydrogenase (25%)" "GO:0051287 (50%) GO:0016616 (38.9%) GO:0008465 (8.3%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (38.9%) hydroxypyruvate reductase (NADH) activity (8.3%)" "IPR006139 (20%) IPR006140 (20%) IPR029753 (20%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (20%)" VEKENVKPVKNVILLIPDGTSLATISIAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50%) GO:0046872 (50%)" "alkaline phosphatase activity (50%) metal ion binding (50%)" "IPR001952 (50%) IPR017850 (50%)" "Alkaline phosphatase (50%) Alkaline-phosphatase-like, core domain superfamily (50%)" VEMTGGYSGWQPDINSPILHAMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (26.3%) IPR002933 (26.3%) IPR011650 (26.3%)" "Peptidase M20C, Xaa-His dipeptidase (26.3%) Peptidase M20 (26.3%) Peptidase M20, dimerisation domain (26.3%)" IQEGVGALAGYGEIFYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.1.3.1 (50%) 6.-.-.- (50%)" "methylmalonyl-CoA carboxytransferase (50%) Ligases (50%)" GO:0015977 (22.4%) GO:0009317 (22.4%) "GO:0004658 (23.5%) GO:0003989 (22.4%) GO:0016740 (7.1%)" carbon fixation (22.4%) acetyl-CoA carboxylase complex (22.4%) "propionyl-CoA carboxylase activity (23.5%) acetyl-CoA carboxylase activity (22.4%) transferase activity (7.1%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" TQSLFANAFGYPATHTIQAPGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.7.1.6 (100%) galactokinase (100%) "GO:0006012 (20.3%) GO:0033499 (0.1%)" "GO:0005829 (20.3%) GO:0005737 (0.1%)" "GO:0004335 (20.3%) GO:0005524 (20.3%) GO:0000287 (18.3%)" "galactose metabolic process (20.3%) galactose catabolic process via UDP-galactose, Leloir pathway (0.1%)" "cytosol (20.3%) cytoplasm (0.1%)" "galactokinase activity (20.3%) ATP binding (20.3%) magnesium ion binding (18.3%)" "IPR014721 (9.5%) IPR019539 (9.5%) IPR019741 (9.5%)" "Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (9.5%) Galactokinase, N-terminal domain (9.5%) Galactokinase, conserved site (9.5%)" SVEQENMVQKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR007139 (100%) Protein of unknown function DUF349 (100%) SSRVPTGPTTMDAEVDDTQYQFIASQELNPQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.1.1 (100%) asparaginase (100%) GO:0006528 (33.3%) "GO:0042597 (31%) GO:0030313 (2.4%)" GO:0004067 (33.3%) asparagine metabolic process (33.3%) "periplasmic space (31%) cell envelope (2.4%)" asparaginase activity (33.3%) "IPR004550 (11.3%) IPR006034 (11.3%) IPR027473 (11.3%)" "L-asparaginase, type II (11.3%) Asparaginase/glutaminase-like (11.3%) L-asparaginase, C-terminal (11.3%)" VECATNRPIWPQGLNAPEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (93.3%) GO:0050112 (6.7%)" "nucleotide binding (93.3%) inositol 2-dehydrogenase (NAD+) activity (6.7%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" CTEEHQAIVR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.1.1.33 (100%) tRNA (guanine(46)-N(7))-methyltransferase (100%) GO:0042255 (0.2%) GO:0005829 (99.5%) "GO:0003677 (0.2%) GO:0008176 (0.2%)" ribosome assembly (0.2%) cytosol (99.5%) "DNA binding (0.2%) tRNA (guanine(46)-N7)-methyltransferase activity (0.2%)" "IPR007416 (99.5%) IPR003358 (0.2%) IPR029063 (0.2%)" "YggL 50S ribosome-binding protein (99.5%) tRNA (guanine-N-7) methyltransferase, Trmb type (0.2%) S-adenosyl-L-methionine-dependent methyltransferase superfamily (0.2%)" ILYDRNEDEEFVSFEPALKEYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.9%) IPR007121 (7.9%) IPR007645 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) RNA polymerase, beta subunit, conserved site (7.9%) RNA polymerase Rpb2, domain 3 (7.9%)" IGQAGEFDYSGSQALK root "6.3.4.16 (45.1%) 6.3.5.5 (22.9%) 2.1.3.2 (13%)" "carbamoyl-phosphate synthase (ammonia) (45.1%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (22.9%) aspartate carbamoyltransferase (13%)" "GO:0006541 (9.1%) GO:0006207 (8.9%) GO:0006228 (5.7%)" "GO:0005829 (5.7%) GO:0005951 (3.2%) GO:0005739 (1.1%)" "GO:0005524 (10.4%) GO:0004088 (10.4%) GO:0046872 (10%)" "glutamine metabolic process (9.1%) 'de novo' pyrimidine nucleobase biosynthetic process (8.9%) UTP biosynthetic process (5.7%)" "cytosol (5.7%) carbamoyl-phosphate synthase complex (3.2%) mitochondrion (1.1%)" "ATP binding (10.4%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (10.4%) metal ion binding (10%)" "IPR016185 (8.7%) IPR005483 (8.7%) IPR005479 (8%)" "Pre-ATP-grasp domain superfamily (8.7%) Carbamoyl phosphate synthase, CPSase domain (8.7%) Carbamoyl phosphate synthase, ATP-binding domain (8%)" DGLGISEIKNFEIETLKDSK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.13.11.24 (100%) quercetin 2,3-dioxygenase (100%) "GO:0046872 (88.2%) GO:0008127 (11.8%)" "metal ion binding (88.2%) quercetin 2,3-dioxygenase activity (11.8%)" "IPR003829 (20%) IPR011051 (20%) IPR012093 (20%)" "Pirin, N-terminal domain (20%) RmlC-like cupin domain superfamily (20%) Pirin (20%)" AKEILFNIEAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (19%) GO:0005737 (14.1%) "GO:0005524 (19%) GO:0140662 (19%) GO:0016853 (14.8%)" protein refolding (19%) cytoplasm (14.1%) "ATP binding (19%) ATP-dependent protein folding chaperone (19%) isomerase activity (14.8%)" "IPR001844 (16.9%) IPR002423 (16.9%) IPR027410 (16.9%)" "Chaperonin Cpn60/GroEL (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%) TCP-1-like chaperonin intermediate domain superfamily (16.9%)" IASVAGGFPSSQTFTEVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (25%) GO:0016052 (25%)" GO:0005737 (25%) GO:0004139 (25%) "deoxyribonucleotide catabolic process (25%) carbohydrate catabolic process (25%)" cytoplasm (25%) deoxyribose-phosphate aldolase activity (25%) "IPR002915 (33.3%) IPR011343 (33.3%) IPR013785 (33.3%)" "DeoC/FbaB/LacD aldolase (33.3%) Deoxyribose-phosphate aldolase (33.3%) Aldolase-type TIM barrel (33.3%)" EQGLTPVLCIGETEAENEAGKTEEVCAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0019563 (16.6%)" "GO:0005829 (16.6%) GO:0016020 (0%)" "GO:0004807 (16.6%) GO:0016853 (0.2%) GO:0042802 (0%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) glycerol catabolic process (16.6%)" "cytosol (16.6%) membrane (0%)" "triose-phosphate isomerase activity (16.6%) isomerase activity (0.2%) identical protein binding (0%)" "IPR000652 (20.1%) IPR013785 (20.1%) IPR035990 (20.1%)" "Triosephosphate isomerase (20.1%) Aldolase-type TIM barrel (20.1%) Triosephosphate isomerase superfamily (20.1%)" MVIGVPSGSTEVELR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0000902 (25.4%) GO:0008360 (25.4%) GO:0043093 (0.1%)" "GO:0005737 (25.4%) GO:0005856 (0.1%) GO:0005886 (0.1%)" "GO:0005524 (23.1%) GO:0016787 (0.4%)" "cell morphogenesis (25.4%) regulation of cell shape (25.4%) FtsZ-dependent cytokinesis (0.1%)" "cytoplasm (25.4%) cytoskeleton (0.1%) plasma membrane (0.1%)" "ATP binding (23.1%) hydrolase activity (0.4%)" "IPR004753 (32.6%) IPR043129 (32.6%) IPR056546 (32.6%)" "Cell shape determining protein MreB (32.6%) ATPase, nucleotide binding domain (32.6%) MreB/MamK-like (32.6%)" TNELKADEERVK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.6%) GO:0051301 (12.5%) GO:0043335 (12%)" "GO:0005737 (12.4%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003755 (12.6%) GO:0043022 (12%) GO:0044183 (12%)" "protein transport (12.6%) cell division (12.5%) protein unfolding (12%)" "cytoplasm (12.4%) cytosol (0%) membrane (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.6%) ribosome binding (12%) protein folding chaperone (12%)" "IPR008880 (12.7%) IPR027304 (12.7%) IPR037041 (12.7%)" "Trigger factor, C-terminal (12.7%) Trigger factor/SurA domain superfamily (12.7%) Trigger factor, C-terminal domain superfamily (12.7%)" GTWDTDEPILVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.5.4.25 (52%) 4.1.99.12 (48%)" "GTP cyclohydrolase II (52%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (48%)" GO:0009231 (12.9%) GO:0005829 (12.9%) "GO:0003935 (12.9%) GO:0005525 (12.9%) GO:0000287 (11.9%)" riboflavin biosynthetic process (12.9%) cytosol (12.9%) "GTP cyclohydrolase II activity (12.9%) GTP binding (12.9%) magnesium ion binding (11.9%)" "IPR000926 (17.1%) IPR017945 (17.1%) IPR032677 (17.1%)" "GTP cyclohydrolase II, RibA (17.1%) DHBP synthase RibB-like alpha/beta domain superfamily (17.1%) GTP cyclohydrolase II (17.1%)" IKDIESVTNHDVK Pseudomonadati Bacteria Pseudomonadati 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (26.5%) GO:0044208 (26.5%) GO:0006188 (2.7%)" "GO:0004018 (29.3%) GO:0070626 (14.4%) GO:0016829 (0.2%)" "'de novo' IMP biosynthetic process (26.5%) 'de novo' AMP biosynthetic process (26.5%) IMP biosynthetic process (2.7%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (29.3%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (14.4%) lyase activity (0.2%)" "IPR000362 (12.5%) IPR004769 (12.5%) IPR008948 (12.5%)" "Fumarate lyase family (12.5%) Adenylosuccinate lyase (12.5%) L-Aspartase-like (12.5%)" LQELHKEIEDTQKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0034605 (20%) GO:0042026 (20%)" GO:0005737 (20%) "GO:0005524 (20%) GO:0016887 (20%)" "cellular response to heat (20%) protein refolding (20%)" cytoplasm (20%) "ATP binding (20%) ATP hydrolysis activity (20%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" HAEDPTPLVCHGSWPGVITR root "3.6.1.66 (99.3%) 3.6.1.9 (0.7%)" "XTP/dITP diphosphatase (99.3%) nucleotide diphosphatase (0.7%)" "GO:0009117 (11.4%) GO:0009146 (11.3%) GO:0009143 (0.2%)" "GO:0005829 (11.4%) GO:0005840 (0.2%) GO:0005737 (0.1%)" "GO:0000166 (11.3%) GO:0035870 (11.3%) GO:0036222 (11.3%)" "nucleotide metabolic process (11.4%) purine nucleoside triphosphate catabolic process (11.3%) nucleoside triphosphate catabolic process (0.2%)" "cytosol (11.4%) ribosome (0.2%) cytoplasm (0.1%)" "nucleotide binding (11.3%) dITP diphosphatase activity (11.3%) XTP diphosphatase activity (11.3%)" "IPR002637 (33.6%) IPR029001 (33.5%) IPR020922 (32.6%)" "RdgB/HAM1 (33.6%) Inosine triphosphate pyrophosphatase-like (33.5%) dITP/XTP pyrophosphatase (32.6%)" SRLPQNITLTEV root "1.5.1.34 (53.8%) 1.-.-.- (46.2%)" "6,7-dihydropteridine reductase (53.8%) Oxidoreductases (46.2%)" GO:0046256 (28.2%) "GO:0005829 (28.2%) GO:0016020 (0.3%)" "GO:0046857 (27.9%) GO:0004155 (12.6%) GO:0016491 (1.4%)" 2,4,6-trinitrotoluene catabolic process (28.2%) "cytosol (28.2%) membrane (0.3%)" "oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor (27.9%) 6,7-dihydropteridine reductase activity (12.6%) oxidoreductase activity (1.4%)" "IPR000415 (25.9%) IPR029479 (25.7%) IPR050627 (24.3%)" "Nitroreductase-like (25.9%) Nitroreductase (25.7%) Nitroreductase/BluB (24.3%)" PADGSKDVFVHFSAIQGNGFK root "GO:0010468 (0.2%) GO:0000917 (0.1%) GO:0006508 (0.1%)" "GO:0005829 (49%) GO:0005737 (0.3%) GO:0005886 (0.1%)" "GO:0003677 (25.6%) GO:0003676 (23.7%) GO:0001072 (0.1%)" "regulation of gene expression (0.2%) division septum assembly (0.1%) proteolysis (0.1%)" "cytosol (49%) cytoplasm (0.3%) plasma membrane (0.1%)" "DNA binding (25.6%) nucleic acid binding (23.7%) transcription antitermination factor activity, RNA binding (0.1%)" "IPR002059 (16.7%) IPR011129 (16.7%) IPR012340 (16.7%)" "Cold-shock protein Csp, DNA-binding (16.7%) Cold-shock domain (16.7%) Nucleic acid-binding, OB-fold (16.7%)" FFNAFGDPIDGGPEIEGQEVPIGGPSVNPVRR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (32.3%) GO:1902600 (32.3%) GO:0006811 (1%)" "GO:0005524 (33.3%) GO:0016787 (1%)" "ATP metabolic process (32.3%) proton transmembrane transport (32.3%) monoatomic ion transport (1%)" "ATP binding (33.3%) hydrolase activity (1%)" "IPR000194 (20.2%) IPR022879 (20.2%) IPR027417 (20.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.2%) V-type ATP synthase regulatory subunit B/beta (20.2%) P-loop containing nucleoside triphosphate hydrolase (20.2%)" SAVPATVHCDHLIQANMGAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" SYLDKLGFLEVETPVLIGSTPEGAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.12 (100%) aspartate--tRNA ligase (100%) GO:0006422 (20.4%) GO:0005737 (19.1%) "GO:0004815 (20.4%) GO:0005524 (20.4%) GO:0003676 (19.1%)" aspartyl-tRNA aminoacylation (20.4%) cytoplasm (19.1%) "aspartate-tRNA ligase activity (20.4%) ATP binding (20.4%) nucleic acid binding (19.1%)" "IPR004364 (9.7%) IPR045864 (9.7%) IPR002312 (9.1%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (9.7%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (9.7%) Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.1%)" IEKTEEKTPQVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (24.7%) "GO:0003743 (25.9%) GO:0003924 (24.7%) GO:0005525 (24.7%)" cytoplasm (24.7%) "translation initiation factor activity (25.9%) GTPase activity (24.7%) GTP binding (24.7%)" "IPR000178 (9.1%) IPR000795 (9.1%) IPR005225 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translational (tr)-type GTP-binding domain (9.1%) Small GTP-binding domain (9.1%)" NISIDGDAEQALIAVGGKR AYNEFSQFIAANPTVDK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR027304 (33.3%) IPR046357 (33.3%) IPR052029 (33.3%)" "Trigger factor/SurA domain superfamily (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) Periplasmic chaperone PpiD (33.3%)" TAISHNHQLNVQQGGEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR012910 (12.9%) IPR023996 (12.9%) IPR023997 (12.9%)" "TonB-dependent receptor, plug domain (12.9%) TonB-dependent outer membrane protein, SusC/RagA (12.9%) TonB-dependent outer membrane protein SusC/RagA, conserved site (12.9%)" KGRNPQTGAEIKIPASK Bacillota Bacteria Bacillati Bacillota "GO:0006270 (11%) GO:0010467 (11%) GO:0030261 (11%)" "GO:0005829 (11%) GO:1990103 (11%) GO:1990178 (11%)" "GO:0003677 (11.7%) GO:0030527 (11%) GO:0042802 (11%)" "DNA replication initiation (11%) gene expression (11%) chromosome condensation (11%)" "cytosol (11%) DnaA-HU complex (11%) HU-DNA complex (11%)" "DNA binding (11.7%) structural constituent of chromatin (11%) identical protein binding (11%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" ATGVGYDELASVDGK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (31%) GO:1902600 (31%)" "GO:0005524 (31%) GO:0016787 (6.9%)" "ATP metabolic process (31%) proton transmembrane transport (31%)" "ATP binding (31%) hydrolase activity (6.9%)" "IPR000194 (20.1%) IPR004100 (20.1%) IPR022879 (20.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (20.1%) V-type ATP synthase regulatory subunit B/beta (20.1%)" LVSWYDNETGYSNK root "1.2.1.- (86.2%) 1.2.1.12 (13.8%)" "With NAD(+) or NADP(+) as acceptor (86.2%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (13.8%)" "GO:0006006 (20.2%) GO:0072524 (17.4%) GO:0006096 (0.3%)" "GO:0005737 (0.2%) GO:0005829 (0%) GO:0005576 (0%)" "GO:0051287 (20.2%) GO:0050661 (20.2%) GO:0004365 (16%)" "glucose metabolic process (20.2%) pyridine-containing compound metabolic process (17.4%) glycolytic process (0.3%)" "cytoplasm (0.2%) cytosol (0%) extracellular region (0%)" "NAD binding (20.2%) NADP binding (20.2%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (16%)" "IPR020831 (17.3%) IPR020829 (17.2%) IPR036291 (16.6%)" "Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.3%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.2%) NAD(P)-binding domain superfamily (16.6%)" FFKPEEIFEYK Bacteria Bacteria 2.7.4.6 (100%) nucleoside-diphosphate kinase (100%) "GO:0006183 (17%) GO:0006228 (17%) GO:0006241 (17%)" GO:0005737 (2%) "GO:0004550 (17%) GO:0005524 (16.3%) GO:0046872 (13.6%)" "GTP biosynthetic process (17%) UTP biosynthetic process (17%) CTP biosynthetic process (17%)" cytoplasm (2%) "nucleoside diphosphate kinase activity (17%) ATP binding (16.3%) metal ion binding (13.6%)" "IPR001564 (27.8%) IPR034907 (27.8%) IPR036850 (27.8%)" "Nucleoside diphosphate kinase (27.8%) Nucleoside diphosphate kinase-like domain (27.8%) Nucleoside diphosphate kinase-like domain superfamily (27.8%)" AGVPIIGVIYLPVKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.1.3.7 (100%) 3'(2'),5'-bisphosphate nucleotidase (100%) "GO:0000103 (20%) GO:0050427 (20%)" GO:0005886 (20%) "GO:0000287 (20%) GO:0008441 (20%)" "sulfate assimilation (20%) 3'-phosphoadenosine 5'-phosphosulfate metabolic process (20%)" plasma membrane (20%) "magnesium ion binding (20%) 3'(2'),5'-bisphosphate nucleotidase activity (20%)" "IPR000760 (25%) IPR006240 (25%) IPR020583 (25%)" "Inositol monophosphatase-like (25%) 3'(2'),5'-bisphosphate nucleotidase CysQ (25%) Inositol monophosphatase, metal-binding site (25%)" MTDLDLAGKR root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.6%) GO:0006094 (16.6%) GO:0008615 (0%)" "GO:0005829 (16.6%) GO:0005737 (0%)" "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "glycolytic process (16.6%) gluconeogenesis (16.6%) pyridoxine biosynthetic process (0%)" "cytosol (16.6%) cytoplasm (0%)" "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (25.1%) IPR015824 (25.1%) IPR036043 (25.1%)" "Phosphoglycerate kinase (25.1%) Phosphoglycerate kinase, N-terminal (25.1%) Phosphoglycerate kinase superfamily (25.1%)" AGVANALAHK root "GO:0042744 (7.6%) GO:0030185 (0.4%) GO:0042542 (0.4%)" "GO:0005833 (9%) GO:0031838 (7.8%) GO:0072562 (7.3%)" "GO:0019825 (9.2%) GO:0020037 (9.2%) GO:0046872 (9.2%)" "hydrogen peroxide catabolic process (7.6%) nitric oxide transport (0.4%) response to hydrogen peroxide (0.4%)" "hemoglobin complex (9%) haptoglobin-hemoglobin complex (7.8%) blood microparticle (7.3%)" "oxygen binding (9.2%) heme binding (9.2%) metal ion binding (9.2%)" "IPR000971 (20.2%) IPR009050 (20.2%) IPR012292 (20.2%)" "Globin (20.2%) Globin-like superfamily (20.2%) Globin/Protoglobin (20.2%)" GEEVDRIVGLEIGADDYIPKPFNPR root "GO:0045893 (18.3%) GO:0006355 (1.7%) GO:0000160 (0%)" "GO:0005829 (19.9%) GO:0032993 (19.9%) GO:0005737 (0%)" "GO:0000976 (19.9%) GO:0000156 (19.9%) GO:0003677 (0.1%)" "positive regulation of DNA-templated transcription (18.3%) regulation of DNA-templated transcription (1.7%) phosphorelay signal transduction system (0%)" "cytosol (19.9%) protein-DNA complex (19.9%) cytoplasm (0%)" "transcription cis-regulatory region binding (19.9%) phosphorelay response regulator activity (19.9%) DNA binding (0.1%)" "IPR001789 (16.8%) IPR011006 (16.8%) IPR039420 (16.8%)" "Signal transduction response regulator, receiver domain (16.8%) CheY-like superfamily (16.8%) Transcriptional regulatory protein WalR-like (16.8%)" IFGPIKDYECHCGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.2%) GO:0000428 (17.3%) "GO:0003677 (17.2%) GO:0003899 (17.2%) GO:0000287 (14.8%)" DNA-templated transcription (17.2%) DNA-directed RNA polymerase complex (17.3%) "DNA binding (17.2%) DNA-directed RNA polymerase activity (17.2%) magnesium ion binding (14.8%)" "IPR007080 (9.4%) IPR044893 (9.4%) IPR045867 (9.4%)" "RNA polymerase Rpb1, domain 1 (9.4%) RNA polymerase Rpb1, clamp domain superfamily (9.4%) DNA-directed RNA polymerase, subunit beta-prime (9.4%)" KLESIFLFVTGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0003824 (33.3%) GO:0046872 (33.3%) GO:0051536 (33.3%)" "catalytic activity (33.3%) metal ion binding (33.3%) iron-sulfur cluster binding (33.3%)" "IPR007197 (32.5%) IPR013785 (32.5%) IPR050377 (32.5%)" "Radical SAM (32.5%) Aldolase-type TIM barrel (32.5%) Radical SAM PqqA peptide cyclase/Mycofactocin maturase MftC-like (32.5%)" VWQYFTVVPDFK Bacteria Bacteria 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0006177 (0.2%) GO:0005829 (32.8%) "GO:0003921 (33%) GO:0005524 (33%) GO:0016740 (0.8%)" GMP biosynthetic process (0.2%) cytosol (32.8%) "GMP synthase activity (33%) ATP binding (33%) transferase activity (0.8%)" "IPR001674 (17.4%) IPR025777 (17.3%) IPR014729 (17.2%)" "GMP synthase, C-terminal (17.4%) GMP synthetase ATP pyrophosphatase domain (17.3%) Rossmann-like alpha/beta/alpha sandwich fold (17.2%)" VVLLLGENHKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0034599 (33.3%) GO:0005737 (33.3%) GO:0016491 (33.3%) cellular response to oxidative stress (33.3%) cytoplasm (33.3%) oxidoreductase activity (33.3%) "IPR000415 (33.3%) IPR029479 (33.3%) IPR033877 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase Frm2/Hbn1-like (33.3%)" AVVNYDVTLTNDANAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0019867 (50%) GO:2001070 (50%) outer membrane (50%) starch binding (50%) "IPR025970 (51%) IPR032187 (49%)" "SusE outer membrane protein (51%) Outer membrane protein SusF/SusE-like, C-terminal (49%)" AGGVFTDEAIDAYIALRR root 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (14.3%) GO:0019740 (14.3%) GO:0009314 (0%)" "GO:0005737 (14.3%) GO:0016020 (14.3%) GO:0005829 (0%)" "GO:0004356 (14.4%) GO:0005524 (14%) GO:0046872 (14%)" "glutamine biosynthetic process (14.3%) nitrogen utilization (14.3%) response to radiation (0%)" "cytoplasm (14.3%) membrane (14.3%) cytosol (0%)" "glutamine synthetase activity (14.4%) ATP binding (14%) metal ion binding (14%)" "IPR008146 (12.8%) IPR014746 (12.8%) IPR001637 (12.6%)" "Glutamine synthetase, catalytic domain (12.8%) Glutamine synthetase/guanido kinase, catalytic domain (12.8%) Glutamine synthetase class-I, adenylation site (12.6%)" HLFDVIHDIFPLAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006631 (50%) GO:0031956 (50%) fatty acid metabolic process (50%) medium-chain fatty acid-CoA ligase activity (50%) "IPR000873 (25%) IPR025110 (25%) IPR042099 (25%)" "AMP-dependent synthetase/ligase domain (25%) AMP-binding enzyme, C-terminal domain (25%) ANL, N-terminal domain (25%)" RLIAELNDFLAANASEFALIKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" NRVDLTPEIDVDAILAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.2.10 (78.8%) 5.4.2.2 (15.4%) 5.4.2.8 (5.8%)" "phosphoglucosamine mutase (78.8%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (15.4%) phosphomannomutase (5.8%)" "GO:0005975 (14.3%) GO:0006048 (13.8%) GO:0009252 (13.8%)" GO:0005829 (13.8%) "GO:0004615 (14%) GO:0008966 (14%) GO:0000287 (13.8%)" "carbohydrate metabolic process (14.3%) UDP-N-acetylglucosamine biosynthetic process (13.8%) peptidoglycan biosynthetic process (13.8%)" cytosol (13.8%) "phosphomannomutase activity (14%) phosphoglucosamine mutase activity (14%) magnesium ion binding (13.8%)" "IPR005843 (10.2%) IPR005846 (10.2%) IPR016055 (10.2%)" "Alpha-D-phosphohexomutase, C-terminal (10.2%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (10.2%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (10.2%)" NKKPAPMDCYDAAAWSAISGLSEMSIAR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae "3.2.1.49 (75%) 3.2.1.- (25%)" "alpha-N-acetylgalactosaminidase (75%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (25%)" "GO:0000166 (50%) GO:0016798 (44.4%) GO:0008456 (5.6%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (44.4%) alpha-N-acetylgalactosaminidase activity (5.6%)" "IPR000683 (17%) IPR006311 (17%) IPR036291 (17%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (17%) Twin-arginine translocation pathway, signal sequence (17%) NAD(P)-binding domain superfamily (17%)" VNQIGSLTETLDAIEMAQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.9%) IPR020809 (16.9%) IPR020810 (16.9%)" "Enolase (16.9%) Enolase, conserved site (16.9%) Enolase, C-terminal TIM barrel domain (16.9%)" GAQEAHEAIRPTYMENQTVEGSAQER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.6.2.1 (85.7%) 5.99.1.2 (14.3%)" "DNA topoisomerase (85.7%) Transferred entry: 5.6.2.1 (14.3%)" GO:0006265 (25%) "GO:0003677 (25%) GO:0003917 (25%) GO:0046872 (25%)" DNA topological change (25%) "DNA binding (25%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25%) metal ion binding (25%)" "IPR000380 (7.1%) IPR003601 (7.1%) IPR003602 (7.1%)" "DNA topoisomerase, type IA (7.1%) DNA topoisomerase, type IA, domain 2 (7.1%) DNA topoisomerase, type IA, DNA-binding domain (7.1%)" DRPAVPGNPIFEMPEALSGASVHEKLDLINNQLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.9 (100%) Xaa-Pro dipeptidase (100%) GO:0005737 (31.4%) "GO:0046872 (31.4%) GO:0070006 (31.4%) GO:0102009 (3.9%)" cytoplasm (31.4%) "metal ion binding (31.4%) metalloaminopeptidase activity (31.4%) proline dipeptidase activity (3.9%)" "IPR000587 (14.3%) IPR000994 (14.3%) IPR029149 (14.3%)" "Creatinase, N-terminal (14.3%) Peptidase M24 (14.3%) Creatinase/Aminopeptidase P/Spt16, N-terminal (14.3%)" YVDLAVNEGVKDIFIKR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.5%) GO:0005829 (16.5%) "GO:0000049 (16.5%) GO:0000287 (16.5%) GO:0004824 (16.5%)" lysyl-tRNA aminoacylation (16.5%) cytosol (16.5%) "tRNA binding (16.5%) magnesium ion binding (16.5%) lysine-tRNA ligase activity (16.5%)" "IPR002313 (11.1%) IPR004364 (11.1%) IPR004365 (11.1%)" "Lysine-tRNA ligase, class II (11.1%) Aminoacyl-tRNA synthetase, class II (D/K/N) (11.1%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.1%)" GSDRPIAPSEYSHAMGNSNGNLAAQWR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.2%) IPR006101 (7.2%) IPR006103 (7.2%)" "Beta galactosidase small chain/ domain 5 (7.2%) Glycoside hydrolase, family 2 (7.2%) Glycoside hydrolase family 2, catalytic domain (7.2%)" GKVVTLGEIMLR Bacteria Bacteria "2.7.1.45 (66.7%) 2.7.1.92 (33.3%)" "2-dehydro-3-deoxygluconokinase (66.7%) 5-dehydro-2-deoxygluconokinase (33.3%)" "GO:0016301 (91.9%) GO:0008673 (5.4%) GO:0047590 (2.7%)" "kinase activity (91.9%) 2-dehydro-3-deoxygluconokinase activity (5.4%) 5-dehydro-2-deoxygluconokinase activity (2.7%)" "IPR029056 (33.8%) IPR011611 (33.3%) IPR052700 (32.9%)" "Ribokinase-like (33.8%) Carbohydrate kinase PfkB (33.3%) Carbohydrate kinase PfkB-like (32.9%)" MPDDVVDKLK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 4.2.1.32 (100%) L(+)-tartrate dehydratase (100%) "GO:0006099 (0.1%) GO:0044010 (0.1%) GO:1901275 (0.1%)" "GO:0005829 (0.1%) GO:1902494 (0.1%)" "GO:0046872 (32.9%) GO:0051539 (32.9%) GO:0016829 (21.9%)" "tricarboxylic acid cycle (0.1%) single-species biofilm formation (0.1%) tartrate metabolic process (0.1%)" "cytosol (0.1%) catalytic complex (0.1%)" "metal ion binding (32.9%) 4 iron, 4 sulfur cluster binding (32.9%) lyase activity (21.9%)" "IPR004646 (50%) IPR051208 (50%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (50%) Class-I Fumarase/Tartrate Dehydratase (50%)" TDALMLSGETAYGKYPIEAVQTMTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (9.1%) "GO:0000287 (18.2%) GO:0004743 (18.2%) GO:0005524 (18.2%)" response to stress (9.1%) "magnesium ion binding (18.2%) pyruvate kinase activity (18.2%) ATP binding (18.2%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" AGTSAPEFTLVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" IQEIADKYGLK Bacteria Bacteria "2.6.1.- (36.4%) 2.6.1.33 (27.3%) 2.6.1.87 (27.3%)" "Transaminases (36.4%) dTDP-4-amino-4,6-dideoxy-D-glucose transaminase (27.3%) UDP-4-amino-4-deoxy-L-arabinose aminotransferase (27.3%)" GO:0000271 (32.9%) "GO:0030170 (32.9%) GO:0008483 (30.7%) GO:0019179 (1.7%)" polysaccharide biosynthetic process (32.9%) "pyridoxal phosphate binding (32.9%) transaminase activity (30.7%) dTDP-4-amino-4,6-dideoxy-D-glucose transaminase activity (1.7%)" "IPR000653 (25.9%) IPR015421 (25.9%) IPR015424 (25.9%)" "DegT/DnrJ/EryC1/StrS aminotransferase (25.9%) Pyridoxal phosphate-dependent transferase, major domain (25.9%) Pyridoxal phosphate-dependent transferase (25.9%)" QAQEAIKEEAER Bacteria Bacteria GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" LLVVLPEANK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (19.3%) GO:0003723 (0.7%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (19.3%) RNA binding (0.7%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" ELVDQYWKK root 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (29.8%) GO:1902600 (29.8%)" GO:0005743 (6.4%) "GO:0005524 (29.8%) GO:0016787 (4.3%)" "ATP metabolic process (29.8%) proton transmembrane transport (29.8%)" mitochondrial inner membrane (6.4%) "ATP binding (29.8%) hydrolase activity (4.3%)" "IPR000194 (19.2%) IPR004100 (19.2%) IPR022879 (19.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (19.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (19.2%) V-type ATP synthase regulatory subunit B/beta (19.2%)" KYDMDLVVCGHHQDFWSK root GO:0006950 (0.4%) "GO:0005737 (99%) GO:0016020 (0.2%)" "GO:0042802 (0.2%) GO:0042803 (0.2%)" response to stress (0.4%) "cytoplasm (99%) membrane (0.2%)" "identical protein binding (0.2%) protein homodimerization activity (0.2%)" "IPR006016 (33.7%) IPR014729 (33.7%) IPR006015 (32.7%)" "UspA (33.7%) Rossmann-like alpha/beta/alpha sandwich fold (33.7%) Universal stress protein A family (32.7%)" NFADLDEEQQKAVQQIYPQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015031 (33.3%) GO:0005886 (33.3%) GO:0022857 (33.3%) protein transport (33.3%) plasma membrane (33.3%) transmembrane transporter activity (33.3%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) STSDDIHNTTATGK Pseudomonadati Bacteria Pseudomonadati "1.11.1.21 (90.5%) 1.11.1.6 (8.8%) 1.11.1.7 (0.7%)" "catalase peroxidase (90.5%) catalase (8.8%) peroxidase (0.7%)" "GO:0042744 (16.6%) GO:0070301 (16.6%) GO:0006979 (0.1%)" GO:0005829 (16.6%) "GO:0004096 (16.7%) GO:0020037 (16.6%) GO:0046872 (15.9%)" "hydrogen peroxide catabolic process (16.6%) cellular response to hydrogen peroxide (16.6%) response to oxidative stress (0.1%)" cytosol (16.6%) "catalase activity (16.7%) heme binding (16.6%) metal ion binding (15.9%)" "IPR000763 (20.8%) IPR010255 (20.8%) IPR019794 (20.1%)" "Catalase-peroxidase haem (20.8%) Haem peroxidase superfamily (20.8%) Peroxidase, active site (20.1%)" NLFCLNLMSSPGSGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0051604 (20%) "GO:0003924 (20%) GO:0005525 (20%) GO:0008270 (20%)" protein maturation (20%) "GTPase activity (20%) GTP binding (20%) zinc ion binding (20%)" "IPR003495 (27.3%) IPR004392 (27.3%) IPR027417 (27.3%)" "CobW/HypB/UreG, nucleotide-binding domain (27.3%) Hydrogenase maturation factor HypB (27.3%) P-loop containing nucleoside triphosphate hydrolase (27.3%)" AGVAAIFGPGTSVSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (16.7%) IPR006099 (16.7%) IPR006158 (16.7%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-binding domain (16.7%)" IGNQVNLGAQSGVPGNIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.3.1.191 (94.7%) 2.3.1.- (5.3%)" "UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase (94.7%) Transferring groups other than amino-acyl groups (5.3%)" GO:0009245 (33.3%) GO:0016020 (33.3%) GO:0016410 (33.3%) lipid A biosynthetic process (33.3%) membrane (33.3%) N-acyltransferase activity (33.3%) "IPR001451 (25%) IPR007691 (25%) IPR011004 (25%)" "Hexapeptide repeat (25%) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD (25%) Trimeric LpxA-like superfamily (25%)" NRIDLTPETDVDAILAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.10 (86.7%) 5.4.2.2 (10%) 5.4.2.8 (3.3%)" "phosphoglucosamine mutase (86.7%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (10%) phosphomannomutase (3.3%)" "GO:0005975 (14.1%) GO:0006048 (14.1%) GO:0009252 (14.1%)" GO:0005829 (14.1%) "GO:0000287 (14.1%) GO:0004615 (14.1%) GO:0008966 (14.1%)" "carbohydrate metabolic process (14.1%) UDP-N-acetylglucosamine biosynthetic process (14.1%) peptidoglycan biosynthetic process (14.1%)" cytosol (14.1%) "magnesium ion binding (14.1%) phosphomannomutase activity (14.1%) phosphoglucosamine mutase activity (14.1%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" SWDRVNAALENEEIIKGYIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.8%) "GO:0022627 (24.3%) GO:0005840 (0.9%) GO:1990904 (0.5%)" "GO:0003729 (24.8%) GO:0003735 (24.8%)" translation (24.8%) "cytosolic small ribosomal subunit (24.3%) ribosome (0.9%) ribonucleoprotein complex (0.5%)" "mRNA binding (24.8%) structural constituent of ribosome (24.8%)" "IPR003029 (24.9%) IPR012340 (24.9%) IPR035104 (24.9%)" "S1 domain (24.9%) Nucleic acid-binding, OB-fold (24.9%) Ribosomal protein S1-like (24.9%)" GVYDYFKKDEALSSIPVIGPSGEGAQLEGSKDFAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0006189 (20%) GO:0009113 (20%)" "GO:0004637 (20%) GO:0005524 (20%) GO:0046872 (20%)" "'de novo' IMP biosynthetic process (20%) purine nucleobase biosynthetic process (20%)" "phosphoribosylamine-glycine ligase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000115 (11.1%) IPR011054 (11.1%) IPR011761 (11.1%)" "Phosphoribosylglycinamide synthetase (11.1%) Rudiment single hybrid motif (11.1%) ATP-grasp fold (11.1%)" QGVVDKIQALVDAGEYPSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016740 (100%) transferase activity (100%) IPR029044 (100%) Nucleotide-diphospho-sugar transferases (100%) LNNTLAENR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (52%) IPR019734 (48%)" "Tetratricopeptide-like helical domain superfamily (52%) Tetratricopeptide repeat (48%)" GRYQAFTQADLTNLR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 5.1.3.20 (100%) ADP-glyceromanno-heptose 6-epimerase (100%) "GO:0097171 (21.8%) GO:0009244 (20.6%) GO:0005975 (5.2%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0008712 (26.4%) GO:0050661 (25.7%) GO:0016853 (0.3%)" "ADP-L-glycero-beta-D-manno-heptose biosynthetic process (21.8%) lipopolysaccharide core region biosynthetic process (20.6%) carbohydrate metabolic process (5.2%)" "cytosol (0%) membrane (0%)" "ADP-glyceromanno-heptose 6-epimerase activity (26.4%) NADP binding (25.7%) isomerase activity (0.3%)" "IPR036291 (33.7%) IPR001509 (33.5%) IPR011912 (32.8%)" "NAD(P)-binding domain superfamily (33.7%) NAD-dependent epimerase/dehydratase (33.5%) ADP-L-glycero-D-manno-heptose-6-epimerase (32.8%)" IISIKDIIAYR Bacteria Bacteria "3.5.4.25 (51.1%) 4.1.99.12 (48.9%)" "GTP cyclohydrolase II (51.1%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (48.9%)" GO:0009231 (12.7%) GO:0005829 (12.7%) "GO:0003935 (12.7%) GO:0005525 (12.6%) GO:0008686 (12.6%)" riboflavin biosynthetic process (12.7%) cytosol (12.7%) "GTP cyclohydrolase II activity (12.7%) GTP binding (12.6%) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (12.6%)" "IPR017945 (16.8%) IPR032677 (16.8%) IPR036144 (16.8%)" "DHBP synthase RibB-like alpha/beta domain superfamily (16.8%) GTP cyclohydrolase II (16.8%) GTP cyclohydrolase II superfamily (16.8%)" GVMEKEDPTNPEFVVPAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.4.14.- (100%) Dipeptidyl-peptidases and tripeptidyl-peptidases (100%) "GO:0006508 (25%) GO:0043171 (25%)" "GO:0008239 (25%) GO:0070009 (25%)" "proteolysis (25%) peptide catabolic process (25%)" "dipeptidyl-peptidase activity (25%) serine-type aminopeptidase activity (25%)" "IPR009003 (33.3%) IPR019500 (33.3%) IPR043504 (33.3%)" "Peptidase S1, PA clan (33.3%) Peptidase S46 (33.3%) Peptidase S1, PA clan, chymotrypsin-like fold (33.3%)" MNAEAGACEDKKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (50%) GO:0016491 (19%) GO:0016692 (16.7%)" "iron ion binding (50%) oxidoreductase activity (19%) NADH peroxidase activity (16.7%)" "IPR003251 (12.5%) IPR009040 (12.5%) IPR009078 (12.5%)" "Rubrerythrin, diiron-binding domain (12.5%) Ferritin-like diiron domain (12.5%) Ferritin-like superfamily (12.5%)" MGAVDVVPFIPIRGV Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.2.5 (100%) glutamate formimidoyltransferase (100%) "GO:0006547 (13.6%) GO:0019556 (9.1%) GO:0019557 (9.1%)" GO:0005737 (22.7%) "GO:0005542 (22.7%) GO:0016740 (13.6%) GO:0030409 (9.1%)" "L-histidine metabolic process (13.6%) L-histidine catabolic process to glutamate and formamide (9.1%) L-histidine catabolic process to glutamate and formate (9.1%)" cytoplasm (22.7%) "folic acid binding (22.7%) transferase activity (13.6%) glutamate formimidoyltransferase activity (9.1%)" "IPR004227 (14.3%) IPR012886 (14.3%) IPR013802 (14.3%)" "Formiminotransferase catalytic domain (14.3%) Formiminotransferase, N-terminal subdomain (14.3%) Formiminotransferase, C-terminal subdomain (14.3%)" GISIASSTGVHDWEDVVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.3.1.1 (100%) dihydrouracil dehydrogenase (NAD(+)) (100%) "GO:0006210 (10.6%) GO:0006212 (10.6%) GO:0006222 (8.5%)" GO:0005737 (17%) "GO:0004152 (14.9%) GO:0002058 (10.6%) GO:0050661 (10.6%)" "thymine catabolic process (10.6%) uracil catabolic process (10.6%) UMP biosynthetic process (8.5%)" cytoplasm (17%) "dihydroorotate dehydrogenase activity (14.9%) uracil binding (10.6%) NADP binding (10.6%)" "IPR005720 (29.6%) IPR012135 (29.6%) IPR013785 (29.6%)" "Dihydroorotate dehydrogenase, catalytic (29.6%) Dihydroorotate dehydrogenase, class 1/ 2 (29.6%) Aldolase-type TIM barrel (29.6%)" GGSGGSYGGGGSGGGYGGGSGSR Hominoidea Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Euarchontoglires Primates Haplorrhini Simiiformes Hominoidea "GO:0045109 (11.6%) GO:0007283 (9.3%) GO:0030855 (9.3%)" "GO:0005882 (11.6%) GO:0005829 (9.3%) GO:0005856 (4.7%)" "GO:0005198 (11.6%) GO:0005200 (2.3%) GO:0030280 (2.3%)" "intermediate filament organization (11.6%) spermatogenesis (9.3%) epithelial cell differentiation (9.3%)" "intermediate filament (11.6%) cytosol (9.3%) cytoskeleton (4.7%)" "structural molecule activity (11.6%) structural constituent of cytoskeleton (2.3%) structural constituent of skin epidermis (2.3%)" "IPR002957 (33.3%) IPR018039 (33.3%) IPR039008 (33.3%)" "Keratin, type I (33.3%) Intermediate filament protein, conserved site (33.3%) Intermediate filament, rod domain (33.3%)" ADHVNKLWEIIDWDVVEKRL Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.15.1.1 (100%) superoxide dismutase (100%) GO:0005737 (33.3%) "GO:0004784 (33.3%) GO:0046872 (33.3%)" cytoplasm (33.3%) "superoxide dismutase activity (33.3%) metal ion binding (33.3%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" GTQTEKNLLTSFAGESQAR Pseudomonadati Bacteria Pseudomonadati "1.11.1.1 (50%) 1.14.13.81 (50%)" "NADH peroxidase (50%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (50%)" "GO:0005506 (49.5%) GO:0016491 (49.5%) GO:0046872 (0.5%)" "iron ion binding (49.5%) oxidoreductase activity (49.5%) metal ion binding (0.5%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" AKEDNIEMQGTVLETLPNTMFR root GO:0005829 (24.9%) "GO:0003743 (25.3%) GO:0043022 (24.9%) GO:0019843 (24.6%)" cytosol (24.9%) "translation initiation factor activity (25.3%) ribosome binding (24.9%) rRNA binding (24.6%)" "IPR012340 (25.1%) IPR004368 (25%) IPR006196 (25%)" "Nucleic acid-binding, OB-fold (25.1%) Translation initiation factor IF-1 (25%) RNA-binding domain, S1, IF1 type (25%)" IVEHVDFYEVK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.6%)" "GO:0003735 (24.9%) GO:0008097 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.6%)" "structural constituent of ribosome (24.9%) 5S rRNA binding (24.9%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" QLPIKNCAYTQCFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (24.9%) GO:0005737 (24.9%) "GO:0004828 (24.9%) GO:0005524 (24.9%) GO:0016874 (0.4%)" seryl-tRNA aminoacylation (24.9%) cytoplasm (24.9%) "serine-tRNA ligase activity (24.9%) ATP binding (24.9%) ligase activity (0.4%)" "IPR002314 (13.6%) IPR002317 (13.6%) IPR006195 (13.6%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (13.6%) Serine-tRNA ligase, type1 (13.6%) Aminoacyl-tRNA synthetase, class II (13.6%)" EFIPSVQKGFEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" AFAEAEGVVLQDEPANKDYPMPLFVADHDPVYVGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000534 (20%) IPR005986 (20%) IPR012080 (20%)" "Semialdehyde dehydrogenase, NAD-binding (20%) Aspartate-semialdehyde dehydrogenase, beta-type (20%) Aspartate-semialdehyde dehydrogenase (20%)" AGELNFADDLLKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" SLGVDVDYPLNQTCCGQPMANAGFENK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0005829 (50%) GO:0016491 (50%) cytosol (50%) oxidoreductase activity (50%) IPR004017 (100%) Cysteine-rich domain (100%) QTLLFGGLESIQHNANRK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0009328 (16.7%) "GO:0000287 (16.7%) GO:0004826 (16.7%) GO:0005524 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) phenylalanine-tRNA ligase complex (16.7%) "magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR005147 (7.9%) IPR041616 (7.9%) IPR045060 (7.9%)" "tRNA synthetase, B5-domain (7.9%) Phenylalanyl tRNA synthetase beta chain, core domain (7.9%) Phenylalanine-tRNA ligase, class IIc, beta subunit (7.9%)" KLDVVLNPTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR015943 (17.7%) IPR051200 (17.7%) IPR003961 (16.1%)" "WD40/YVTN repeat-like-containing domain superfamily (17.7%) Multi-functional host-pathogen interaction and enzymatic activity protein (17.7%) Fibronectin type III (16.1%)" QASVQAIKEKDSEAAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" KAGMTREDLLKGNAAIAEEFGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.37 (93.3%) 1.1.1.- (6.7%)" "malate dehydrogenase (93.3%) With NAD(+) or NADP(+) as acceptor (6.7%)" "GO:0006108 (33%) GO:0006099 (1.3%) GO:0019752 (0.3%)" GO:0005737 (1.3%) "GO:0016615 (29.8%) GO:0016616 (29.8%) GO:0030060 (4.5%)" "malate metabolic process (33%) tricarboxylic acid cycle (1.3%) carboxylic acid metabolic process (0.3%)" cytoplasm (1.3%) "malate dehydrogenase activity (29.8%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (29.8%) L-malate dehydrogenase (NAD+) activity (4.5%)" "IPR001236 (17.1%) IPR036291 (17.1%) IPR001557 (16.6%)" "Lactate/malate dehydrogenase, N-terminal (17.1%) NAD(P)-binding domain superfamily (17.1%) L-lactate/malate dehydrogenase (16.6%)" QVDILGKFPLPVEVIPMAR root 5.3.1.6 (100%) ribose-5-phosphate isomerase (100%) "GO:0006014 (24.9%) GO:0009052 (24.9%)" GO:0005829 (24.9%) "GO:0004751 (24.9%) GO:0016853 (0.3%) GO:0042802 (0.1%)" "D-ribose metabolic process (24.9%) pentose-phosphate shunt, non-oxidative branch (24.9%)" cytosol (24.9%) "ribose-5-phosphate isomerase activity (24.9%) isomerase activity (0.3%) identical protein binding (0.1%)" "IPR004788 (33.7%) IPR037171 (33.7%) IPR020672 (32.6%)" "Ribose 5-phosphate isomerase, type A (33.7%) NagB/RpiA transferase-like (33.7%) Ribose-5-phosphate isomerase, type A, subgroup (32.6%)" NLGLGVNAGHDLNLENLAFFNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.99.2 (100%) pyridoxine 5'-phosphate synthase (100%) GO:0008615 (33.3%) GO:0005829 (33.3%) GO:0033856 (33.3%) pyridoxine biosynthetic process (33.3%) cytosol (33.3%) pyridoxine 5'-phosphate synthase activity (33.3%) "IPR004569 (33.3%) IPR013785 (33.3%) IPR036130 (33.3%)" "Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ (33.3%) Aldolase-type TIM barrel (33.3%) Pyridoxine 5'-phosphate synthase (33.3%)" NAQILVNGQPVLFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.1%) IPR006101 (7.1%) IPR006102 (7.1%)" "Beta galactosidase small chain/ domain 5 (7.1%) Glycoside hydrolase, family 2 (7.1%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.1%)" WWDLEGEFKPLHR root "2.1.1.64 (50.9%) 2.1.1.222 (48.9%) 2.1.1.- (0.1%)" "3-demethylubiquinol 3-O-methyltransferase (50.9%) 2-polyprenyl-6-hydroxyphenol methylase (48.9%) Methyltransferases (0.1%)" "GO:0032259 (26.8%) GO:0006744 (0%) GO:0042538 (0%)" "GO:0031314 (0.1%) GO:0005829 (0%) GO:0009898 (0%)" "GO:0010420 (26.1%) GO:0061542 (26.1%) GO:0102208 (19.9%)" "methylation (26.8%) ubiquinone biosynthetic process (0%) hyperosmotic salinity response (0%)" "extrinsic component of mitochondrial inner membrane (0.1%) cytosol (0%) cytoplasmic side of plasma membrane (0%)" "polyprenyldihydroxybenzoate methyltransferase activity (26.1%) 3-demethylubiquinol 3-O-methyltransferase activity (26.1%) 2-polyprenyl-6-hydroxyphenol methylase activity (19.9%)" "IPR029063 (50.3%) IPR010233 (49.3%) IPR041698 (0.3%)" "S-adenosyl-L-methionine-dependent methyltransferase superfamily (50.3%) Ubiquinone biosynthesis O-methyltransferase (49.3%) Methyltransferase domain 25 (0.3%)" RFPNEPEYHQAVSEVLGTIEEAYNEHPEFEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006537 (25.8%) GO:0005829 (24.2%) "GO:0004354 (25.8%) GO:0000166 (24.2%)" glutamate biosynthetic process (25.8%) cytosol (24.2%) "glutamate dehydrogenase (NADP+) activity (25.8%) nucleotide binding (24.2%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" LTYGTDRLDFAADSFIFGTSAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IVCSYTTALPVMMAAEGYFLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" EMTGIESLKEIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0000160 (100%) phosphorelay signal transduction system (100%) "IPR001789 (33.3%) IPR011006 (33.3%) IPR050595 (33.3%)" "Signal transduction response regulator, receiver domain (33.3%) CheY-like superfamily (33.3%) Bacterial response regulator (33.3%)" TTLTEALLYESGIIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.5%) IPR000795 (7.5%) IPR005225 (7.5%)" "Elongation factor EFG, domain V-like (7.5%) Translational (tr)-type GTP-binding domain (7.5%) Small GTP-binding domain (7.5%)" VSELNTQAQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis YNLNLAPDYRPWDNPVGGSDNGSFAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.11.24 (100%) aminopeptidase S (100%) GO:0006508 (41.9%) "GO:0008235 (41.9%) GO:0004177 (16.1%)" proteolysis (41.9%) "metalloexopeptidase activity (41.9%) aminopeptidase activity (16.1%)" "IPR007484 (50%) IPR045175 (50%)" "Peptidase M28 (50%) Peptidase M28 family (50%)" VALENAASIAGMFLTTECVIVEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.6%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (15.4%) GO:1990220 (0.1%)" "GO:0005524 (17.6%) GO:0140662 (17.6%) GO:0016853 (16%)" "protein refolding (17.6%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (15.4%) GroEL-GroES complex (0.1%)" "ATP binding (17.6%) ATP-dependent protein folding chaperone (17.6%) isomerase activity (16%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR027413 (16.8%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like equatorial domain superfamily (16.8%)" HVQVAEMVIEK root "3.6.4.- (99.9%) 3.6.1.- (0.1%) 3.6.1.15 (0%)" "Acting on ATP; involved in cellular and subcellular movement (99.9%) In phosphorus-containing anhydrides (0.1%) nucleoside-triphosphate phosphatase (0%)" "GO:0006353 (14.4%) GO:0055085 (0%) GO:0006438 (0%)" "GO:0005829 (13.8%) GO:0016020 (0%)" "GO:0003723 (14.4%) GO:0005524 (14.4%) GO:0008186 (14.4%)" "DNA-templated transcription termination (14.4%) transmembrane transport (0%) valyl-tRNA aminoacylation (0%)" "cytosol (13.8%) membrane (0%)" "RNA binding (14.4%) ATP binding (14.4%) ATP-dependent activity, acting on RNA (14.4%)" "IPR004665 (10.1%) IPR000194 (10.1%) IPR027417 (10.1%)" "Transcription termination factor Rho (10.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%) P-loop containing nucleoside triphosphate hydrolase (10.1%)" TLAQDILGKTEVTYGDVTLDFGKPFEK root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.6%) GO:0006418 (0.1%)" "GO:0005829 (14.6%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0000049 (14.6%) GO:0004824 (14.6%) GO:0005524 (14.6%)" "lysyl-tRNA aminoacylation (14.6%) tRNA aminoacylation for protein translation (0.1%)" "cytosol (14.6%) cytoplasm (0.1%) membrane (0.1%)" "tRNA binding (14.6%) lysine-tRNA ligase activity (14.6%) ATP binding (14.6%)" "IPR004364 (11.5%) IPR006195 (11.5%) IPR045864 (11.5%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (11.5%) Aminoacyl-tRNA synthetase, class II (11.5%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.5%)" KSTGFYQLIEFNAEPTVIDKLELNFR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" AEFVVAGAPACADDLKAQGIDQFVNVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" AGEEFTIDVTFPEEYHAENLK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0051301 (12.5%) GO:0015031 (12.5%) GO:0043335 (12.1%)" "GO:0005737 (12.5%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003755 (12.6%) GO:0043022 (12.1%) GO:0044183 (12.1%)" "cell division (12.5%) protein transport (12.5%) protein unfolding (12.1%)" "cytoplasm (12.5%) cytosol (0%) membrane (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.6%) ribosome binding (12.1%) protein folding chaperone (12.1%)" "IPR001179 (12.7%) IPR037041 (12.6%) IPR046357 (12.6%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (12.7%) Trigger factor, C-terminal domain superfamily (12.6%) Peptidyl-prolyl cis-trans isomerase domain superfamily (12.6%)" VNEIAYDVDDNPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006520 (16.8%) GO:0044205 (16.6%) GO:0006207 (15.9%)" GO:0005829 (16.8%) "GO:0004070 (16.8%) GO:0016597 (16.8%) GO:0016740 (0.2%)" "amino acid metabolic process (16.8%) 'de novo' UMP biosynthetic process (16.6%) 'de novo' pyrimidine nucleobase biosynthetic process (15.9%)" cytosol (16.8%) "aspartate carbamoyltransferase activity (16.8%) amino acid binding (16.8%) transferase activity (0.2%)" "IPR006130 (20.3%) IPR006131 (20.3%) IPR036901 (20.3%)" "Aspartate/ornithine carbamoyltransferase (20.3%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20.3%) Aspartate/ornithine carbamoyltransferase superfamily (20.3%)" MQMAQDVSSMVLALR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.5%) GO:0005737 (13.9%) "GO:0000049 (14.5%) GO:0004822 (14.5%) GO:0005524 (14.5%)" isoleucyl-tRNA aminoacylation (14.5%) cytoplasm (13.9%) "tRNA binding (14.5%) isoleucine-tRNA ligase activity (14.5%) ATP binding (14.5%)" "IPR002300 (12.6%) IPR009080 (12.6%) IPR013155 (12.6%)" "Aminoacyl-tRNA synthetase, class Ia (12.6%) Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (12.6%) Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding (12.6%)" NDKLPFYQVAIDEEMLNNQVNAYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" AILQIIFDTAPEKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.24.55 (100%) pitrilysin (100%) GO:0006508 (33.3%) "GO:0004222 (33.3%) GO:0046872 (33.3%)" proteolysis (33.3%) "metalloendopeptidase activity (33.3%) metal ion binding (33.3%)" "IPR001431 (20%) IPR007863 (20%) IPR011249 (20%)" "Peptidase M16, zinc-binding site (20%) Peptidase M16, C-terminal (20%) Metalloenzyme, LuxS/M16 peptidase-like (20%)" TVICEQIEAIDFSALK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR007139 (100%) Protein of unknown function DUF349 (100%) SCSELVTHSYKR Bacteria Bacteria 4.2.1.45 (100%) CDP-glucose 4,6-dehydratase (100%) "GO:0047733 (64.3%) GO:0016829 (35.7%)" "CDP-glucose 4,6-dehydratase activity (64.3%) lyase activity (35.7%)" "IPR013445 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "CDP-glucose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" ELMGEGGGLCIFHGTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (88.9%) GO:0050112 (11.1%)" "nucleotide binding (88.9%) inositol 2-dehydrogenase (NAD+) activity (11.1%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" VSQGVKDYMNTEIIAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.9%) GO:0006508 (7.9%)" GO:0000428 (16.9%) "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0032549 (16.9%)" "DNA-templated transcription (16.9%) proteolysis (7.9%)" DNA-directed RNA polymerase complex (16.9%) "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) ribonucleoside binding (16.9%)" "IPR007120 (7.4%) IPR007121 (7.4%) IPR007641 (7.4%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.4%) RNA polymerase, beta subunit, conserved site (7.4%) RNA polymerase Rpb2, domain 7 (7.4%)" STGIDKQTVLASVESFMDIVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (50%) IPR010992 (50%)" "Histone-like DNA-binding protein (50%) Integration host factor (IHF)-like DNA-binding domain superfamily (50%)" GYYKNDEATQNVFTEDGWLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.2.1.3 (100%) long-chain-fatty-acid--CoA ligase (100%) "GO:0016405 (62.5%) GO:0004467 (37.5%)" "CoA-ligase activity (62.5%) long-chain fatty acid-CoA ligase activity (37.5%)" "IPR000873 (33.3%) IPR020845 (33.3%) IPR042099 (33.3%)" "AMP-dependent synthetase/ligase domain (33.3%) AMP-binding, conserved site (33.3%) ANL, N-terminal domain (33.3%)" VLVCVPVGATQVER root "GO:0000902 (25%) GO:0008360 (25%) GO:0043093 (0.1%)" "GO:0005737 (25%) GO:0005856 (0.1%) GO:0005886 (0.1%)" "GO:0005524 (24.6%) GO:0042802 (0%)" "cell morphogenesis (25%) regulation of cell shape (25%) FtsZ-dependent cytokinesis (0.1%)" "cytoplasm (25%) cytoskeleton (0.1%) plasma membrane (0.1%)" "ATP binding (24.6%) identical protein binding (0%)" "IPR056546 (33.3%) IPR004753 (33.3%) IPR043129 (33.3%)" "MreB/MamK-like (33.3%) Cell shape determining protein MreB (33.3%) ATPase, nucleotide binding domain (33.3%)" KGQLVFTYFHFACDKELTEAMMR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.1.1 (100%) alanine dehydrogenase (100%) GO:0042853 (25.4%) GO:0005886 (25.4%) "GO:0000286 (25.4%) GO:0000166 (23.8%)" L-alanine catabolic process (25.4%) plasma membrane (25.4%) "alanine dehydrogenase activity (25.4%) nucleotide binding (23.8%)" "IPR007698 (20%) IPR007886 (20%) IPR008141 (20%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (20%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (20%) Alanine dehydrogenase (20%)" VAEFDDALMEKYFDDPSTITEEEVLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0032790 (20.2%) GO:0005737 (19.4%) "GO:0003746 (20.4%) GO:0005525 (20.2%) GO:0003924 (19.9%)" ribosome disassembly (20.2%) cytoplasm (19.4%) "translation elongation factor activity (20.4%) GTP binding (20.2%) GTPase activity (19.9%)" "IPR000640 (6.3%) IPR004161 (6.3%) IPR004540 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%) Translation elongation factor EFG/EF2 (6.3%)" SWDLSKEELASILSTAPR Escherichia coli Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli "IPR005587 (50%) IPR023146 (50%)" "Uncharacterised protein family UPF0304, YfbU (50%) YfbU, alpha-helical bundle domain superfamily (50%)" SIGFSSSSTGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.4.2.1 (50%) 2.4.2.2 (50%)" "purine-nucleoside phosphorylase (50%) pyrimidine-nucleoside phosphorylase (50%)" GO:0005829 (23.2%) "GO:0004731 (23.2%) GO:0004850 (14.7%) GO:0009032 (14.7%)" cytosol (23.2%) "purine-nucleoside phosphorylase activity (23.2%) uridine phosphorylase activity (14.7%) thymidine phosphorylase activity (14.7%)" "IPR009664 (33.3%) IPR011051 (33.3%) IPR014710 (33.3%)" "Pyrimidine/purine nucleoside phosphorylase (33.3%) RmlC-like cupin domain superfamily (33.3%) RmlC-like jelly roll fold (33.3%)" KKVEELAEVLQANGINAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.2.4 (100%) DNA 3'-5' helicase (100%) "GO:0006260 (8.3%) GO:0006281 (8.3%) GO:0006310 (8.3%)" "GO:0005737 (8.3%) GO:0030894 (8.3%) GO:0043590 (8.3%)" "GO:0003677 (8.3%) GO:0005524 (8.3%) GO:0009378 (8.3%)" "DNA replication (8.3%) DNA repair (8.3%) DNA recombination (8.3%)" "cytoplasm (8.3%) replisome (8.3%) bacterial nucleoid (8.3%)" "DNA binding (8.3%) ATP binding (8.3%) four-way junction helicase activity (8.3%)" "IPR001650 (7.1%) IPR002121 (7.1%) IPR004589 (7.1%)" "Helicase, C-terminal domain-like (7.1%) HRDC domain (7.1%) DNA helicase, ATP-dependent, RecQ type (7.1%)" QVYENQGAMYENIMIPITDGKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (1.2%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (1.2%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" VSLSEAPENEIPVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.17.7.3 (100%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (100%) "GO:0016114 (17.1%) GO:0019288 (17.1%)" "GO:0046429 (17.1%) GO:0051539 (17.1%) GO:0005506 (16.5%)" "terpenoid biosynthetic process (17.1%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.1%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.1%) 4 iron, 4 sulfur cluster binding (17.1%) iron ion binding (16.5%)" "IPR004588 (25.5%) IPR011005 (25.5%) IPR017178 (24.5%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25.5%) Dihydropteroate synthase-like superfamily (25.5%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (24.5%)" IEAGIIHVGDEVEILGLGEDKKSVVTGVEMFRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20.2%) "GO:0003746 (20.2%) GO:0003924 (20.2%) GO:0005525 (20.2%)" cytosol (20.2%) "translation elongation factor activity (20.2%) GTPase activity (20.2%) GTP binding (20.2%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" KIDADIVMASDPDADR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.2 (68.8%) 5.4.2.- (31.3%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (68.8%) Phosphotransferases (phosphomutases) (31.3%)" "GO:0005975 (24.3%) GO:0006166 (24.3%)" "GO:0000287 (24.3%) GO:0008973 (24.3%) GO:0004614 (2.9%)" "carbohydrate metabolic process (24.3%) purine ribonucleoside salvage (24.3%)" "magnesium ion binding (24.3%) phosphopentomutase activity (24.3%) phosphoglucomutase activity (2.9%)" "IPR005841 (12.6%) IPR005844 (12.6%) IPR005845 (12.6%)" "Alpha-D-phosphohexomutase superfamily (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.6%)" LLVLDVDGTLLNDKKEITPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.-.-.- (100%) Hydrolases (100%) GO:0005829 (25%) "GO:0000287 (25%) GO:0016289 (25%) GO:0016791 (25%)" cytosol (25%) "magnesium ion binding (25%) acyl-CoA hydrolase activity (25%) phosphatase activity (25%)" "IPR000150 (14.3%) IPR003736 (14.3%) IPR006379 (14.3%)" "Cof family (14.3%) Phenylacetic acid degradation-related domain (14.3%) HAD-superfamily hydrolase, subfamily IIB (14.3%)" LGGLPISAICSTHGPVWTENITK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0009055 (25%) GO:0010181 (25%) GO:0016491 (25%)" "electron transfer activity (25%) FMN binding (25%) oxidoreductase activity (25%)" "IPR001279 (14.3%) IPR008254 (14.3%) IPR016440 (14.3%)" "Metallo-beta-lactamase (14.3%) Flavodoxin/nitric oxide synthase (14.3%) Rubredoxin-oxygen oxidoreductase (14.3%)" TPLKSYPLDIHNVQDHLK root 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0006879 (14.3%) GO:0030261 (14.3%) GO:0006950 (0%)" "GO:0005737 (14.3%) GO:0009295 (13.6%) GO:0016020 (0%)" "GO:0008199 (14.4%) GO:0016722 (14.4%) GO:0003677 (14.3%)" "intracellular iron ion homeostasis (14.3%) chromosome condensation (14.3%) response to stress (0%)" "cytoplasm (14.3%) nucleoid (13.6%) membrane (0%)" "ferric iron binding (14.4%) oxidoreductase activity, acting on metal ions (14.4%) DNA binding (14.3%)" "IPR002177 (16.7%) IPR008331 (16.7%) IPR009078 (16.7%)" "DNA-binding protein Dps (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like superfamily (16.7%)" GLPSFSPEMFK Pseudomonadati Bacteria Pseudomonadati "GO:0006449 (15.5%) GO:0006415 (0.1%)" GO:0005829 (17.2%) "GO:0003924 (17.2%) GO:0005525 (17.2%) GO:0016150 (17.2%)" "regulation of translational termination (15.5%) translational termination (0.1%)" cytosol (17.2%) "GTPase activity (17.2%) GTP binding (17.2%) translation release factor activity, codon nonspecific (17.2%)" "IPR004548 (9.2%) IPR032090 (9.2%) IPR035647 (9.2%)" "Peptide chain release factor 3 (9.2%) Peptide chain release factor 3, C-terminal (9.2%) EF-G domain III/V-like (9.2%)" LDKTLGSIADLTR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (33.1%) "GO:0022627 (33.1%) GO:0005840 (0.8%)" GO:0003735 (33.1%) translation (33.1%) "cytosolic small ribosomal subunit (33.1%) ribosome (0.8%)" structural constituent of ribosome (33.1%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" FAPTMEWDTAAGHAIAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.1.3.7 (100%) 3'(2'),5'-bisphosphate nucleotidase (100%) "GO:0000103 (20.1%) GO:0050427 (20.1%)" GO:0005886 (19.4%) "GO:0008441 (20.1%) GO:0000287 (19.7%) GO:0046872 (0.4%)" "sulfate assimilation (20.1%) 3'-phosphoadenosine 5'-phosphosulfate metabolic process (20.1%)" plasma membrane (19.4%) "3'(2'),5'-bisphosphate nucleotidase activity (20.1%) magnesium ion binding (19.7%) metal ion binding (0.4%)" "IPR000760 (25.2%) IPR050725 (25.2%) IPR020583 (24.9%)" "Inositol monophosphatase-like (25.2%) CysQ/Inositol Monophosphatase (25.2%) Inositol monophosphatase, metal-binding site (24.9%)" LLAAFDFPFRK root "GO:0006412 (16.6%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (17%) GO:1990904 (16.5%) GO:0022625 (0.1%)" "GO:0000049 (16.6%) GO:0003735 (16.6%) GO:0019843 (16.6%)" "translation (16.6%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (17%) ribonucleoprotein complex (16.5%) cytosolic large ribosomal subunit (0.1%)" "tRNA binding (16.6%) structural constituent of ribosome (16.6%) rRNA binding (16.6%)" "IPR022803 (16.8%) IPR031309 (16.8%) IPR002132 (16.8%)" "Large ribosomal subunit protein uL5 domain superfamily (16.8%) Large ribosomal subunit protein uL5, C-terminal (16.8%) Large ribosomal subunit protein uL5 (16.8%)" ASLGGGVDKIEK Bacteria Bacteria 6.-.-.- (100%) Ligases (100%) GO:0015977 (22%) GO:0009317 (22%) "GO:0004658 (24.9%) GO:0003989 (22%) GO:0016740 (9.1%)" carbon fixation (22%) acetyl-CoA carboxylase complex (22%) "propionyl-CoA carboxylase activity (24.9%) acetyl-CoA carboxylase activity (22%) transferase activity (9.1%)" "IPR011762 (20.4%) IPR029045 (20.4%) IPR034733 (20.4%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20.4%) ClpP/crotonase-like domain superfamily (20.4%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.4%)" MELDGYCVVEGAYTTVYNHMGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" GYHESAPYAK Pseudomonadati Bacteria Pseudomonadati "6.3.1.2 (75%) 6.3.1.- (25%)" "glutamine synthetase (75%) Acid--ammonia (or amine) ligases (amide synthases) (25%)" "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" "GO:0004356 (20%) GO:0016874 (0.2%)" "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" "glutamine synthetase activity (20%) ligase activity (0.2%)" "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" GMGTIEEIFGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.4.3 (100%) adenylate kinase (100%) GO:0044209 (25%) GO:0005737 (25%) "GO:0004017 (25%) GO:0005524 (25%)" AMP salvage (25%) cytoplasm (25%) "AMP kinase activity (25%) ATP binding (25%)" "IPR000850 (33.3%) IPR027417 (33.3%) IPR033690 (33.3%)" "Adenylate kinase/UMP-CMP kinase (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%) Adenylate kinase, conserved site (33.3%)" SASIRIPVVSSPK root 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (14.6%) GO:0019740 (14.6%) GO:0009314 (0.1%)" "GO:0005737 (14.6%) GO:0016020 (14.6%) GO:0005829 (0.1%)" "GO:0004356 (14.6%) GO:0005524 (13.1%) GO:0046872 (13%)" "glutamine biosynthetic process (14.6%) nitrogen utilization (14.6%) response to radiation (0.1%)" "cytoplasm (14.6%) membrane (14.6%) cytosol (0.1%)" "glutamine synthetase activity (14.6%) ATP binding (13.1%) metal ion binding (13%)" "IPR008146 (13.4%) IPR014746 (13.4%) IPR001637 (12.6%)" "Glutamine synthetase, catalytic domain (13.4%) Glutamine synthetase/guanido kinase, catalytic domain (13.4%) Glutamine synthetase class-I, adenylation site (12.6%)" FAETEEEFKEAVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.21 (100%) phosphoribosylglycinamide formyltransferase 2 (100%) GO:0006189 (16.7%) GO:0005829 (16.7%) "GO:0000287 (16.7%) GO:0004644 (16.7%) GO:0005524 (16.7%)" 'de novo' IMP biosynthetic process (16.7%) cytosol (16.7%) "magnesium ion binding (16.7%) phosphoribosylglycinamide formyltransferase activity (16.7%) ATP binding (16.7%)" "IPR003135 (12.5%) IPR005862 (12.5%) IPR011054 (12.5%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.5%) Formate-dependent phosphoribosylglycinamide formyltransferase (12.5%) Rudiment single hybrid motif (12.5%)" QLTIADMFAETIRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (18.9%) IPR000842 (18.9%) IPR005946 (18.9%)" "Phosphoribosyltransferase domain (18.9%) Phosphoribosyl pyrophosphate synthetase, conserved site (18.9%) Ribose-phosphate pyrophosphokinase (18.9%)" ILLSSLEGFAITSIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.7%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.7%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011260 (16.7%) IPR011262 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.7%) DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" TLYDRYQLGEAVDFANIDKAPEER Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (18.9%) "GO:0003746 (22.6%) GO:0003924 (22.6%) GO:0005525 (22.6%)" cytosol (18.9%) "translation elongation factor activity (22.6%) GTPase activity (22.6%) GTP binding (22.6%)" "IPR000795 (9.5%) IPR027417 (9.5%) IPR031157 (9.5%)" "Translational (tr)-type GTP-binding domain (9.5%) P-loop containing nucleoside triphosphate hydrolase (9.5%) Tr-type G domain, conserved site (9.5%)" LDEEYEEKMASLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (14.3%) GO:0006508 (14.3%)" GO:0000428 (14.3%) "GO:0003677 (14.3%) GO:0003899 (14.3%) GO:0004190 (14.3%)" "DNA-templated transcription (14.3%) proteolysis (14.3%)" DNA-directed RNA polymerase complex (14.3%) "DNA binding (14.3%) DNA-directed RNA polymerase activity (14.3%) aspartic-type endopeptidase activity (14.3%)" "IPR001969 (7.1%) IPR007120 (7.1%) IPR007121 (7.1%)" "Aspartic peptidase, active site (7.1%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.1%) RNA polymerase, beta subunit, conserved site (7.1%)" ALFKEPNDKALN root "GO:0006865 (32.9%) GO:0015813 (0.2%) GO:0070778 (0.2%)" "GO:0005576 (32.9%) GO:0030288 (32.7%) GO:0016020 (0.2%)" "GO:0016595 (0.2%) GO:0070335 (0.2%)" "amino acid transport (32.9%) L-glutamate transmembrane transport (0.2%) L-aspartate transmembrane transport (0.2%)" "extracellular region (32.9%) outer membrane-bounded periplasmic space (32.7%) membrane (0.2%)" "glutamate binding (0.2%) aspartate binding (0.2%)" "IPR051455 (50.1%) IPR001638 (49.9%)" "Bacterial solute-binding protein 3 (50.1%) Solute-binding protein family 3/N-terminal domain of MltF (49.9%)" AEAPAAAPAAK root "2.3.1.12 (94.3%) 2.3.1.- (4.4%) 2.3.1.61 (0.6%)" "dihydrolipoyllysine-residue acetyltransferase (94.3%) Transferring groups other than amino-acyl groups (4.4%) dihydrolipoyllysine-residue succinyltransferase (0.6%)" "GO:0006086 (19.5%) GO:0000022 (0.2%) GO:0030951 (0.2%)" "GO:0005737 (19.4%) GO:0045254 (16.5%) GO:0000776 (0.2%)" "GO:0031405 (19.4%) GO:0004742 (18.8%) GO:0016407 (0.8%)" "pyruvate decarboxylation to acetyl-CoA (19.5%) mitotic spindle elongation (0.2%) establishment or maintenance of microtubule cytoskeleton polarity (0.2%)" "cytoplasm (19.4%) pyruvate dehydrogenase complex (16.5%) kinetochore (0.2%)" "lipoic acid binding (19.4%) dihydrolipoyllysine-residue acetyltransferase activity (18.8%) acetyltransferase activity (0.8%)" "IPR050743 (11.5%) IPR004167 (11.2%) IPR036625 (11.2%)" "2-oxoacid dehydrogenase family, E2 component (11.5%) Peripheral subunit-binding domain (11.2%) E3-binding domain superfamily (11.2%)" IADELNLNVDTVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0003677 (100%) DNA binding (100%) ARLDKSDEEAINAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.1%) "GO:0022627 (32.7%) GO:0005840 (1.1%)" GO:0003735 (33.1%) translation (33.1%) "cytosolic small ribosomal subunit (32.7%) ribosome (1.1%)" structural constituent of ribosome (33.1%) "IPR001865 (25.2%) IPR023591 (25.2%) IPR005706 (24.9%)" "Small ribosomal subunit protein uS2 (25.2%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.2%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (24.9%)" TVQVVPHITDEIKR Pseudomonadati Bacteria Pseudomonadati 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.6%) GO:0044210 (11.5%) GO:0006241 (0.1%)" "GO:0005829 (11.6%) GO:0097268 (11.4%)" "GO:0003883 (11.6%) GO:0042802 (11.6%) GO:0005524 (11.5%)" "pyrimidine nucleobase biosynthetic process (11.6%) 'de novo' CTP biosynthetic process (11.5%) CTP biosynthetic process (0.1%)" "cytosol (11.6%) cytoophidium (11.4%)" "CTP synthase activity (11.6%) identical protein binding (11.6%) ATP binding (11.5%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR027417 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) P-loop containing nucleoside triphosphate hydrolase (16.7%)" LQQIEEETGLTIEQVKDINRR root "GO:0006352 (25.8%) GO:0009408 (0.1%) GO:0045892 (0.1%)" "GO:0005737 (22%) GO:0000345 (0.1%) GO:0005829 (0.1%)" "GO:0016987 (25.8%) GO:0003677 (25.7%) GO:0016779 (0.1%)" "DNA-templated transcription initiation (25.8%) response to heat (0.1%) negative regulation of DNA-templated transcription (0.1%)" "cytoplasm (22%) cytosolic DNA-directed RNA polymerase complex (0.1%) cytosol (0.1%)" "sigma factor activity (25.8%) DNA binding (25.7%) nucleotidyltransferase activity (0.1%)" "IPR013325 (7.5%) IPR007631 (7.4%) IPR050239 (6.8%)" "RNA polymerase sigma factor, region 2 (7.5%) RNA polymerase sigma factor 70, non-essential domain (7.4%) Sigma-70 factor family, RNA polymerase initiation factors (6.8%)" DQAGIDKIMIDLDGTENK root "4.2.1.11 (99.8%) 6.3.4.2 (0.2%)" "phosphopyruvate hydratase (99.8%) CTP synthase (glutamine hydrolyzing) (0.2%)" "GO:0006096 (16.7%) GO:0006396 (0%) GO:0006401 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.6%) GO:0009986 (15.8%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" "glycolytic process (16.7%) RNA processing (0%) RNA catabolic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.6%) cell surface (15.8%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020811 (16.8%) IPR029017 (16.8%)" "Enolase (16.8%) Enolase, N-terminal (16.8%) Enolase-like, N-terminal (16.8%)" EKYIGSDENWEKAEQAIVEACEEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004829 (16.7%) GO:0005524 (16.7%)" threonyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) threonine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" CGLGEFNLPAMQPGSSIMPGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.2%) IPR008948 (14.2%) IPR018951 (14.2%)" "Fumarate lyase family (14.2%) L-Aspartase-like (14.2%) Fumarase C, C-terminal (14.2%)" EFKVECNEGKPQVNYKEAITK NADYIPYLANIDK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" YLDECGPANFFGIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (19.1%) GO:0009098 (19.1%) GO:0009099 (19.1%)" "GO:0004084 (17.3%) GO:0052654 (5.8%) GO:0052655 (5.8%)" "isoleucine biosynthetic process (19.1%) L-leucine biosynthetic process (19.1%) L-valine biosynthetic process (19.1%)" "branched-chain-amino-acid transaminase activity (17.3%) L-leucine-2-oxoglutarate transaminase activity (5.8%) L-valine-2-oxoglutarate transaminase activity (5.8%)" "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" KAAAAAPQAQHGQSASAVSSDASVEVKEMDR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0005737 (33.3%) "GO:0016407 (33.3%) GO:0031405 (33.3%)" cytoplasm (33.3%) "acetyltransferase activity (33.3%) lipoic acid binding (33.3%)" "IPR000089 (12.5%) IPR001078 (12.5%) IPR003016 (12.5%)" "Biotin/lipoyl attachment (12.5%) 2-oxoacid dehydrogenase acyltransferase, catalytic domain (12.5%) 2-oxo acid dehydrogenase, lipoyl-binding site (12.5%)" ADIDYNTSEAHTTYGVIGVK root "GO:0006412 (20%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (20%) GO:0005840 (0.3%) GO:0015934 (0.1%)" "GO:0003735 (20.1%) GO:0019843 (19.7%) GO:0003729 (19.5%)" "translation (20%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (20%) ribosome (0.3%) large ribosomal subunit (0.1%)" "structural constituent of ribosome (20.1%) rRNA binding (19.7%) mRNA binding (19.5%)" "IPR001351 (11.3%) IPR036419 (11.3%) IPR005704 (11.2%)" "Small ribosomal subunit protein uS3, C-terminal (11.3%) Ribosomal protein S3, C-terminal domain superfamily (11.3%) Small ribosomal subunit protein uS3, bacteria (11.2%)" LANKEQAEALR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.5.1.10 (100%) (2E,6E)-farnesyl diphosphate synthase (100%) GO:0008299 (50%) "GO:0004659 (35%) GO:0004337 (15%)" isoprenoid biosynthetic process (50%) "prenyltransferase activity (35%) (2E,6E)-farnesyl diphosphate synthase activity (15%)" "IPR000092 (33.3%) IPR008949 (33.3%) IPR033749 (33.3%)" "Polyprenyl synthetase-like (33.3%) Isoprenoid synthase domain superfamily (33.3%) Polyprenyl synthetase, conserved site (33.3%)" TLAEGQNVEFEIQDGQKGPAAVNVTAI Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0010468 (0.2%) GO:0034605 (0.1%) GO:0060567 (0.1%)" "GO:0005829 (49.4%) GO:0016020 (0.1%)" "GO:0003677 (33.7%) GO:0003676 (16%) GO:0001072 (0.1%)" "regulation of gene expression (0.2%) cellular response to heat (0.1%) negative regulation of termination of DNA-templated transcription (0.1%)" "cytosol (49.4%) membrane (0.1%)" "DNA binding (33.7%) nucleic acid binding (16%) transcription antitermination factor activity, RNA binding (0.1%)" "IPR002059 (16.7%) IPR012156 (16.7%) IPR012340 (16.7%)" "Cold-shock protein Csp, DNA-binding (16.7%) Cold shock, CspA (16.7%) Nucleic acid-binding, OB-fold (16.7%)" YTLGDQGALNPPEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006826 (43.8%) GO:0009279 (50%) GO:0015344 (6.3%) iron ion transport (43.8%) cell outer membrane (50%) siderophore uptake transmembrane transporter activity (6.3%) "IPR008969 (12.9%) IPR012910 (12.9%) IPR023996 (12.9%)" "Carboxypeptidase-like, regulatory domain superfamily (12.9%) TonB-dependent receptor, plug domain (12.9%) TonB-dependent outer membrane protein, SusC/RagA (12.9%)" IQEIPGVTATETLISLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0043200 (32.7%) GO:0005829 (32.7%) GO:0043565 (34.6%) response to amino acid (32.7%) cytosol (32.7%) sequence-specific DNA binding (34.6%) "IPR000485 (16.5%) IPR011008 (16.5%) IPR019887 (16.5%)" "AsnC-type HTH domain (16.5%) Dimeric alpha-beta barrel (16.5%) Transcription regulator AsnC/Lrp, ligand binding domain (16.5%)" KDVHNSIGVVTALNPVIGYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.7%) GO:0006531 (24.7%)" GO:0005829 (24.7%) "GO:0008797 (24.7%) GO:0016853 (1.3%)" "tricarboxylic acid cycle (24.7%) aspartate metabolic process (24.7%)" cytosol (24.7%) "aspartate ammonia-lyase activity (24.7%) isomerase activity (1.3%)" "IPR000362 (12.6%) IPR008948 (12.6%) IPR018951 (12.6%)" "Fumarate lyase family (12.6%) L-Aspartase-like (12.6%) Fumarase C, C-terminal (12.6%)" ISEDQIFYCNQR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0016226 (99.6%) GO:1990229 (0.4%) iron-sulfur cluster assembly (99.6%) iron-sulfur cluster assembly complex (0.4%) "IPR000825 (20.2%) IPR055346 (20.2%) IPR037284 (20.1%)" "SUF system FeS cluster assembly, SufBD core domain (20.2%) SUF system FeS cluster assembly, SufBD (20.2%) SUF system FeS cluster assembly, SufBD superfamily (20.1%)" AELINAMAAESGLSKVDSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" MFNLEEARPYMEEVEGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0016226 (16.1%) GO:0051301 (3.2%)" "GO:0005524 (16.1%) GO:0016887 (16.1%) GO:0046872 (16.1%)" "iron-sulfur cluster assembly (16.1%) cell division (3.2%)" "ATP binding (16.1%) ATP hydrolysis activity (16.1%) metal ion binding (16.1%)" "IPR002744 (16.7%) IPR019591 (16.7%) IPR027417 (16.7%)" "MIP18 family-like (16.7%) Mrp/NBP35 ATP-binding protein (16.7%) P-loop containing nucleoside triphosphate hydrolase (16.7%)" RNEIFQMAMLEPK root "3.6.3.- (75%) 3.6.3.17 (25%)" "Acting on acid anhydrides; catalyzing transmembrane movement of substances (75%) Transferred entry: 7.5.2.8 (25%)" GO:0005737 (3.5%) "GO:0005524 (48.3%) GO:0016887 (48.2%)" cytoplasm (3.5%) "ATP binding (48.3%) ATP hydrolysis activity (48.2%)" "IPR010230 (25.3%) IPR003439 (25.3%) IPR027417 (25.2%)" "FeS cluster assembly SUF system, ATPase SufC (25.3%) ABC transporter-like, ATP-binding domain (25.3%) P-loop containing nucleoside triphosphate hydrolase (25.2%)" IPTNIYESAEEGSFAIAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.5%) GO:0006044 (32.5%)" "GO:0004342 (32.5%) GO:0016853 (2.5%)" "carbohydrate metabolic process (32.5%) N-acetylglucosamine metabolic process (32.5%)" "glucosamine-6-phosphate deaminase activity (32.5%) isomerase activity (2.5%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" IVEEDPKEQGIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.3.4 (100%) 3-dehydroquinate synthase (100%) "GO:0008652 (14.3%) GO:0009073 (14.3%) GO:0009423 (14.3%)" GO:0005737 (14.3%) "GO:0000166 (14.3%) GO:0003856 (14.3%) GO:0046872 (14.3%)" "amino acid biosynthetic process (14.3%) aromatic amino acid family biosynthetic process (14.3%) chorismate biosynthetic process (14.3%)" cytoplasm (14.3%) "nucleotide binding (14.3%) 3-dehydroquinate synthase activity (14.3%) metal ion binding (14.3%)" "IPR016037 (20%) IPR030960 (20%) IPR030963 (20%)" "3-dehydroquinate synthase AroB (20%) 3-dehydroquinate synthase, N-terminal domain (20%) 3-dehydroquinate synthase family (20%)" IDEENNLVISMEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" QVQTGDKFVVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae YFNSYQSMDIDKYIER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0016020 (100%) membrane (100%) "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" LMLEGDELSFTEYNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.13.9 (100%) Xaa-Pro dipeptidase (100%) "GO:0004177 (43.1%) GO:0008235 (24.6%) GO:0046914 (24.6%)" "aminopeptidase activity (43.1%) metalloexopeptidase activity (24.6%) transition metal ion binding (24.6%)" "IPR000587 (18.4%) IPR000994 (18.4%) IPR029149 (18.4%)" "Creatinase, N-terminal (18.4%) Peptidase M24 (18.4%) Creatinase/Aminopeptidase P/Spt16, N-terminal (18.4%)" CSIDPLIGVPDYLAHK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.2.1.5 (95.5%) 6.2.1.- (4.5%)" "succinate--CoA ligase (ADP-forming) (95.5%) Acid--thiol ligases (4.5%)" "GO:0006099 (13.2%) GO:0006104 (13.2%)" "GO:0005829 (13.2%) GO:0042709 (13.2%)" "GO:0000287 (13.2%) GO:0004775 (13.2%) GO:0005524 (13.2%)" "tricarboxylic acid cycle (13.2%) succinyl-CoA metabolic process (13.2%)" "cytosol (13.2%) succinate-CoA ligase complex (13.2%)" "magnesium ion binding (13.2%) succinate-CoA ligase (ADP-forming) activity (13.2%) ATP binding (13.2%)" "IPR005809 (16.7%) IPR005811 (16.7%) IPR013650 (16.7%)" "Succinate--CoA ligase-like, beta subunit (16.7%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (16.7%) ATP-grasp fold, succinyl-CoA synthetase-type (16.7%)" RDDEVIVLTGKDK root "GO:0006412 (16.8%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (17%) GO:1990904 (16.6%) GO:0005829 (15.9%)" "GO:0003735 (16.8%) GO:0019843 (16.5%) GO:0003723 (0.2%)" "translation (16.8%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (17%) ribonucleoprotein complex (16.6%) cytosol (15.9%)" "structural constituent of ribosome (16.8%) rRNA binding (16.5%) RNA binding (0.2%)" "IPR005825 (14.5%) IPR008991 (14.5%) IPR014722 (14.5%)" "Large ribosomal subunit protein uL24, conserved site (14.5%) Translation protein SH3-like domain superfamily (14.5%) Large ribosomal subunit protein uL2, domain 2 (14.5%)" KIPAPLIGELPYLPR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 6.3.3.3 (100%) dethiobiotin synthase (100%) GO:0009102 (16.9%) GO:0005829 (16.6%) "GO:0004141 (16.9%) GO:0000287 (16.6%) GO:0005524 (16.6%)" biotin biosynthetic process (16.9%) cytosol (16.6%) "dethiobiotin synthase activity (16.9%) magnesium ion binding (16.6%) ATP binding (16.6%)" "IPR027417 (50.4%) IPR004472 (49.6%)" "P-loop containing nucleoside triphosphate hydrolase (50.4%) Dethiobiotin synthase BioD (49.6%)" KLGHIMWEHIGMAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (16.7%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (16.7%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" IMFDNFTPEDTRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.2.19 (100%) nicotinate-nucleotide diphosphorylase (carboxylating) (100%) "GO:0009435 (25%) GO:0034213 (25%)" GO:0005737 (25%) GO:0004514 (25%) "NAD+ biosynthetic process (25%) quinolinate catabolic process (25%)" cytoplasm (25%) nicotinate-nucleotide diphosphorylase (carboxylating) activity (25%) "IPR002638 (14.3%) IPR004393 (14.3%) IPR013785 (14.3%)" "Quinolinate phosphoribosyl transferase, C-terminal (14.3%) Nicotinate-nucleotide pyrophosphorylase (14.3%) Aldolase-type TIM barrel (14.3%)" IKGMDESLGHDEAITTLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR007139 (100%) Protein of unknown function DUF349 (100%) SSAIDIIVIDSVAALTPK Bacteria Bacteria "GO:0006281 (13.4%) GO:0006310 (13.4%) GO:0009432 (9.9%)" "GO:0005829 (13.3%) GO:0005737 (0.1%)" "GO:0003697 (13.4%) GO:0005524 (13.4%) GO:0140664 (13.4%)" "DNA repair (13.4%) DNA recombination (13.4%) SOS response (9.9%)" "cytosol (13.3%) cytoplasm (0.1%)" "single-stranded DNA binding (13.4%) ATP binding (13.4%) ATP-dependent DNA damage sensor activity (13.4%)" "IPR013765 (12%) IPR020588 (12%) IPR027417 (12%)" "DNA recombination and repair protein RecA (12%) DNA recombination and repair protein RecA-like, ATP-binding domain (12%) P-loop containing nucleoside triphosphate hydrolase (12%)" REYCHEENDEELRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (7.9%) IPR003029 (7.9%) IPR004087 (7.9%)" "Exoribonuclease, phosphorolytic domain 1 (7.9%) S1 domain (7.9%) K Homology domain (7.9%)" RFNSTYGVDFFPEPASFHLGDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (25%) GO:0005829 (25%) "GO:0004830 (25%) GO:0005524 (25%)" tryptophanyl-tRNA aminoacylation (25%) cytosol (25%) "tryptophan-tRNA ligase activity (25%) ATP binding (25%)" "IPR002305 (18.8%) IPR002306 (18.8%) IPR014729 (18.8%)" "Aminoacyl-tRNA synthetase, class Ic (18.8%) Tryptophan-tRNA ligase (18.8%) Rossmann-like alpha/beta/alpha sandwich fold (18.8%)" AYMQATSNVIDQEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0000160 (5%) "GO:0005524 (47.5%) GO:0016301 (47.5%)" phosphorelay signal transduction system (5%) "ATP binding (47.5%) kinase activity (47.5%)" "IPR002192 (24.6%) IPR013815 (24.6%) IPR051549 (24.6%)" "Pyruvate phosphate dikinase, AMP/ATP-binding (24.6%) ATP-grasp fold, subdomain 1 (24.6%) Phosphoenolpyruvate Utilizing Enzyme (24.6%)" LEAAGASVEVK Bacteria Bacteria GO:0006412 (24.8%) "GO:0022625 (24.3%) GO:0005737 (0.5%) GO:0005840 (0.5%)" "GO:0003729 (24.8%) GO:0003735 (24.8%)" translation (24.8%) "cytosolic large ribosomal subunit (24.3%) cytoplasm (0.5%) ribosome (0.5%)" "mRNA binding (24.8%) structural constituent of ribosome (24.8%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" INQSVSFLEMLDILNEQLVNEGKEPIVFDHDCR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0009060 (25%) GO:0022904 (25%)" "GO:0009055 (25%) GO:0051537 (25%)" "aerobic respiration (25%) respiratory electron transport chain (25%)" "electron transfer activity (25%) 2 iron, 2 sulfur cluster binding (25%)" "IPR006058 (14.3%) IPR009051 (14.3%) IPR012675 (14.3%)" "2Fe-2S ferredoxin, iron-sulphur binding site (14.3%) Alpha-helical ferredoxin (14.3%) Beta-grasp domain superfamily (14.3%)" SVIADEVNKLLSEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.3%) GO:0043335 (16.3%) GO:0051083 (16.3%)" "GO:0003755 (16.3%) GO:0043022 (16.3%) GO:0044183 (16.3%)" "protein transport (16.3%) protein unfolding (16.3%) 'de novo' cotranslational protein folding (16.3%)" "peptidyl-prolyl cis-trans isomerase activity (16.3%) ribosome binding (16.3%) protein folding chaperone (16.3%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" FIVDNGGENHPLAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.2.1.49 (75%) 3.2.1.- (25%)" "alpha-N-acetylgalactosaminidase (75%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (25%)" "GO:0000166 (50%) GO:0016798 (46.2%) GO:0008456 (3.8%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (46.2%) alpha-N-acetylgalactosaminidase activity (3.8%)" "IPR000683 (17.7%) IPR006311 (17.7%) IPR036291 (17.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (17.7%) Twin-arginine translocation pathway, signal sequence (17.7%) NAD(P)-binding domain superfamily (17.7%)" IFPIESPFIESITVNKVGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001857 (25%) IPR008991 (25%) IPR018257 (25%)" "Large ribosomal subunit protein bL19 (25%) Translation protein SH3-like domain superfamily (25%) Large ribosomal subunit protein bL19, conserved site (25%)" AEGITVPIIPGIKPIVFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.5.1.54 (95.7%) 1.5.1.20 (4.3%)" "methylenetetrahydrofolate reductase (NADH) (95.7%) methylenetetrahydrofolate reductase [NAD(P)H] (4.3%)" "GO:0009086 (20%) GO:0035999 (20%)" GO:0005829 (20%) "GO:0071949 (20%) GO:0004489 (12.2%) GO:0106312 (7.8%)" "methionine biosynthetic process (20%) tetrahydrofolate interconversion (20%)" cytosol (20%) "FAD binding (20%) methylenetetrahydrofolate reductase [NAD(P)H] activity (12.2%) methylenetetrahydrofolate reductase (NADH) activity (7.8%)" "IPR003171 (33.8%) IPR029041 (33.8%) IPR004620 (32.4%)" "Methylenetetrahydrofolate reductase-like, catalytic domain (33.8%) FAD-linked oxidoreductase-like (33.8%) 5,10-methylenetetrahydrofolate reductase (32.4%)" VIGVGGGGGNAVTHMYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0000917 (15.1%) GO:0043093 (12.2%) GO:0051258 (12.2%)" "GO:0005737 (15.1%) GO:0032153 (15.1%)" "GO:0003924 (15.1%) GO:0005525 (15.1%)" "division septum assembly (15.1%) FtsZ-dependent cytokinesis (12.2%) protein polymerization (12.2%)" "cytoplasm (15.1%) cell division site (15.1%)" "GTPase activity (15.1%) GTP binding (15.1%)" "IPR000158 (11.2%) IPR003008 (11.2%) IPR008280 (11.2%)" "Cell division protein FtsZ (11.2%) Tubulin/FtsZ, GTPase domain (11.2%) Tubulin/FtsZ, C-terminal (11.2%)" VKNPGLWELPFGTTAR root "7.1.1.- (93.4%) 1.6.5.9 (3.3%) 1.6.5.11 (2.8%)" "Hydron translocation or charge separation linked to oxidoreductase reactions (93.4%) NADH:ubiquinone reductase (non-electrogenic) (3.3%) Transferred entry: 1.6.5.9 (2.8%)" "GO:0045333 (0.1%) GO:0009060 (0%) GO:0022904 (0%)" "GO:0005886 (0.7%) GO:0016020 (0.1%) GO:0045271 (0.1%)" "GO:0046872 (16.7%) GO:0008137 (16.6%) GO:0010181 (16.6%)" "cellular respiration (0.1%) aerobic respiration (0%) respiratory electron transport chain (0%)" "plasma membrane (0.7%) membrane (0.1%) respiratory chain complex I (0.1%)" "metal ion binding (16.7%) NADH dehydrogenase (ubiquinone) activity (16.6%) FMN binding (16.6%)" "IPR001949 (16.9%) IPR037225 (16.9%) IPR011538 (16.8%)" "NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site (16.9%) NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily (16.9%) NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain (16.8%)" NMVADGADDFTECGPGAVLQGLIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0004314 (100%) [acyl-carrier-protein] S-malonyltransferase activity (100%) "IPR001227 (14.3%) IPR004410 (14.3%) IPR014043 (14.3%)" "Acyl transferase domain superfamily (14.3%) Malonyl CoA-acyl carrier protein transacylase, FabD-type (14.3%) Acyl transferase domain (14.3%)" YQAFTQADLTNLR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 5.1.3.20 (100%) ADP-glyceromanno-heptose 6-epimerase (100%) "GO:0097171 (21.8%) GO:0009244 (20.5%) GO:0005975 (5.2%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0008712 (26.4%) GO:0050661 (25.7%) GO:0016853 (0.3%)" "ADP-L-glycero-beta-D-manno-heptose biosynthetic process (21.8%) lipopolysaccharide core region biosynthetic process (20.5%) carbohydrate metabolic process (5.2%)" "cytosol (0%) membrane (0%)" "ADP-glyceromanno-heptose 6-epimerase activity (26.4%) NADP binding (25.7%) isomerase activity (0.3%)" "IPR036291 (33.7%) IPR001509 (33.5%) IPR011912 (32.8%)" "NAD(P)-binding domain superfamily (33.7%) NAD-dependent epimerase/dehydratase (33.5%) ADP-L-glycero-D-manno-heptose-6-epimerase (32.8%)" LTGLEGEQLGIVSLR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0032790 (19.9%) GO:0001731 (0.1%) GO:0006413 (0.1%)" "GO:0005829 (19.9%) GO:0016020 (19.8%) GO:0070992 (0.1%)" "GO:0003743 (20.1%) GO:0043022 (19.8%) GO:0003723 (0.1%)" "ribosome disassembly (19.9%) formation of translation preinitiation complex (0.1%) translational initiation (0.1%)" "cytosol (19.9%) membrane (19.8%) translation initiation complex (0.1%)" "translation initiation factor activity (20.1%) ribosome binding (19.8%) RNA binding (0.1%)" "IPR001288 (16.7%) IPR019814 (16.7%) IPR036787 (16.7%)" "Translation initiation factor 3 (16.7%) Translation initiation factor 3, N-terminal (16.7%) Translation initiation factor 3 (IF-3), N-terminal domain superfamily (16.7%)" LQNPTNEAVAAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 4.4.1.11 (100%) methionine gamma-lyase (100%) "GO:0006535 (13.3%) GO:0019346 (13.3%) GO:0071269 (13.3%)" GO:0005737 (13.3%) "GO:0003961 (13.3%) GO:0004124 (13.3%) GO:0030170 (13.3%)" "cysteine biosynthetic process from serine (13.3%) transsulfuration (13.3%) L-homocysteine biosynthetic process (13.3%)" cytoplasm (13.3%) "O-acetylhomoserine aminocarboxypropyltransferase activity (13.3%) cysteine synthase activity (13.3%) pyridoxal phosphate binding (13.3%)" "IPR000277 (20%) IPR006235 (20%) IPR015421 (20%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (20%) O-acetylhomoserine/O-acetylserine sulfhydrylase (20%) Pyridoxal phosphate-dependent transferase, major domain (20%)" IAQFNVVSEAHNEGTIVSVSDGVIR root "7.1.2.2 (95.2%) 3.6.3.14 (4.8%)" "H(+)-transporting two-sector ATPase (95.2%) Transferred entry: 7.1.2.2 (4.8%)" "GO:0006754 (0.2%) GO:1902600 (0.2%) GO:0015986 (0.1%)" "GO:0045259 (19%) GO:0005886 (18.7%) GO:0005739 (0%)" "GO:0005524 (19.2%) GO:0043531 (19%) GO:0046933 (19%)" "ATP biosynthetic process (0.2%) proton transmembrane transport (0.2%) proton motive force-driven ATP synthesis (0.1%)" "proton-transporting ATP synthase complex (19%) plasma membrane (18.7%) mitochondrion (0%)" "ATP binding (19.2%) ADP binding (19%) proton-transporting ATP synthase activity, rotational mechanism (19%)" "IPR036121 (10.2%) IPR023366 (10.2%) IPR004100 (10.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily (10.2%) ATP synthase subunit alpha, N-terminal domain-like superfamily (10.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.2%)" HLAMMPHLER root 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (18.6%) GO:0006164 (2%)" GO:0005737 (20.5%) "GO:0004642 (20.5%) GO:0046872 (19%) GO:0005524 (19%)" "'de novo' IMP biosynthetic process (18.6%) purine nucleotide biosynthetic process (2%)" cytoplasm (20.5%) "phosphoribosylformylglycinamidine synthase activity (20.5%) metal ion binding (19%) ATP binding (19%)" "IPR029062 (11.7%) IPR010918 (11.3%) IPR055181 (11.3%)" "Class I glutamine amidotransferase-like (11.7%) PurM-like, C-terminal domain (11.3%) FGAR-AT, PurM N-terminal-like domain (11.3%)" QTAFDNWETTDDHGMIIYGIAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.22.- (100%) Cysteine endopeptidases (100%) "GO:0006508 (21.8%) GO:0009636 (18.8%) GO:0043418 (18.8%)" GO:0005737 (18.8%) GO:0070005 (21.8%) "proteolysis (21.8%) response to toxic substance (18.8%) homocysteine catabolic process (18.8%)" cytoplasm (18.8%) cysteine-type aminopeptidase activity (21.8%) "IPR004134 (45.7%) IPR038765 (45.7%) IPR000668 (8.6%)" "Peptidase C1B, bleomycin hydrolase (45.7%) Papain-like cysteine peptidase superfamily (45.7%) Peptidase C1A, papain C-terminal (8.6%)" VISPGTVIVSAGGEVSDVKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.5%) GO:0006164 (0.7%)" GO:0005737 (20%) "GO:0004642 (20%) GO:0046872 (19.6%) GO:0005524 (19.5%)" "'de novo' IMP biosynthetic process (19.5%) purine nucleotide biosynthetic process (0.7%)" cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) metal ion binding (19.6%) ATP binding (19.5%)" "IPR010918 (11.2%) IPR029062 (11.2%) IPR036676 (11.2%)" "PurM-like, C-terminal domain (11.2%) Class I glutamine amidotransferase-like (11.2%) PurM-like, C-terminal domain superfamily (11.2%)" NGVLAGYPLDSLK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0032790 (20.6%) GO:0005737 (18.1%) "GO:0003746 (20.8%) GO:0005525 (20.6%) GO:0003924 (19.7%)" ribosome disassembly (20.6%) cytoplasm (18.1%) "translation elongation factor activity (20.8%) GTP binding (20.6%) GTPase activity (19.7%)" "IPR000640 (6.4%) IPR005517 (6.4%) IPR014721 (6.4%)" "Elongation factor EFG, domain V-like (6.4%) Translation elongation factor EFG/EF2, domain IV (6.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.4%)" KLLKDDPGIEIINIHGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" QSGSVCAGNRFENYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" GIPVDFHEKEQK Bacteroidota Bacteria Pseudomonadati Bacteroidota "5.6.2.2 (97.9%) 5.99.1.3 (2.1%)" "DNA topoisomerase (ATP-hydrolyzing) (97.9%) Transferred entry: 5.6.2.2 (2.1%)" "GO:0006265 (12.6%) GO:0006261 (12.3%) GO:0032259 (0.1%)" "GO:0005694 (12.4%) GO:0005737 (12.3%)" "GO:0003677 (12.6%) GO:0005524 (12.6%) GO:0046872 (12.5%)" "DNA topological change (12.6%) DNA-templated DNA replication (12.3%) methylation (0.1%)" "chromosome (12.4%) cytoplasm (12.3%)" "DNA binding (12.6%) ATP binding (12.6%) metal ion binding (12.5%)" "IPR000565 (7.3%) IPR001241 (7.3%) IPR003594 (7.3%)" "DNA topoisomerase, type IIA, subunit B (7.3%) DNA topoisomerase, type IIA (7.3%) Histidine kinase/HSP90-like ATPase domain (7.3%)" LITQLFGDREMVANATGCSSIYSGSVPSTPYTTNEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (71.4%) 1.2.7.- (28.6%)" "pyruvate synthase (71.4%) With an iron-sulfur protein as acceptor (28.6%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (13.3%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (13.3%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" FWMTFGQEYLTHLR Pseudomonadati Bacteria Pseudomonadati "1.5.1.7 (54.4%) 1.5.1.43 (31.6%) 1.-.-.- (10.5%)" "saccharopine dehydrogenase (NAD(+), L-lysine-forming) (54.4%) carboxynorspermidine synthase (31.6%) Oxidoreductases (10.5%)" "GO:0004754 (43.1%) GO:0102143 (31%) GO:0016491 (24.1%)" "saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (43.1%) carboxynorspermidine dehydrogenase activity (31%) oxidoreductase activity (24.1%)" "IPR032095 (34.1%) IPR005097 (33%) IPR036291 (32.9%)" "Saccharopine dehydrogenase-like, C-terminal (34.1%) Saccharopine dehydrogenase, NADP binding domain (33%) NAD(P)-binding domain superfamily (32.9%)" EVPVEVKPEVR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria GO:0006950 (0.5%) "GO:0005829 (47.6%) GO:0005737 (0.5%)" "GO:0008861 (47.6%) GO:0003824 (1.9%) GO:0016829 (1.4%)" response to stress (0.5%) "cytosol (47.6%) cytoplasm (0.5%)" "formate C-acetyltransferase activity (47.6%) catalytic activity (1.9%) lyase activity (1.4%)" "IPR001150 (26%) IPR050244 (25%) IPR019777 (24.8%)" "Glycine radical domain (26%) Autonomous Glycyl Radical Cofactor (25%) Formate C-acetyltransferase glycine radical, conserved site (24.8%)" TISSVVNSFFGTNALSQFMDQTNPLAEITHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.9%) GO:0006508 (2.4%)" GO:0000428 (19.9%) "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (15.4%)" "DNA-templated transcription (19.9%) proteolysis (2.4%)" DNA-directed RNA polymerase complex (19.9%) "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (15.4%)" "IPR007645 (9.9%) IPR015712 (7.6%) IPR007120 (7.5%)" "RNA polymerase Rpb2, domain 3 (9.9%) DNA-directed RNA polymerase, subunit 2 (7.6%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.5%)" ELAESEGAIER root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (24.7%) GO:0009052 (0.1%)" "GO:0005829 (24.9%) GO:0016020 (0%)" "GO:0004801 (25%) GO:0016740 (0.2%) GO:0016744 (0%)" "carbohydrate metabolic process (25%) pentose-phosphate shunt (24.7%) pentose-phosphate shunt, non-oxidative branch (0.1%)" "cytosol (24.9%) membrane (0%)" "transaldolase activity (25%) transferase activity (0.2%) transketolase or transaldolase activity (0%)" "IPR013785 (25.4%) IPR001585 (25.3%) IPR018225 (24.7%)" "Aldolase-type TIM barrel (25.4%) Transaldolase/Fructose-6-phosphate aldolase (25.3%) Transaldolase, active site (24.7%)" MSTFVIDDTHIGYHER Bifidobacterium adolescentis Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium adolescentis "1.-.-.- (50%) 1.4.3.5 (50%)" "Oxidoreductases (50%) pyridoxal 5'-phosphate synthase (50%)" GO:0016491 (100%) oxidoreductase activity (100%) "IPR011576 (50%) IPR012349 (50%)" "Pyridoxamine 5'-phosphate oxidase, N-terminal (50%) FMN-binding split barrel (50%)" KSTPFAAQVAAER root "GO:0006412 (20%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0005840 (20.1%) GO:1990904 (19.9%) GO:0022627 (0.1%)" "GO:0003735 (20%) GO:0019843 (19.9%) GO:0070181 (0%)" "translation (20%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (20.1%) ribonucleoprotein complex (19.9%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (20%) rRNA binding (19.9%) small ribosomal subunit rRNA binding (0%)" "IPR001971 (25.2%) IPR036967 (25.2%) IPR019981 (25%)" "Small ribosomal subunit protein uS11 (25.2%) Small ribosomal subunit protein uS11 superfamily (25.2%) Small ribosomal subunit protein uS11, bacteria (25%)" NKGGIHGVTYPLVSDFSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" IPTDIYESVEEGANHIACEIAQVIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (31.1%) GO:0006044 (31.1%)" "GO:0004342 (31.1%) GO:0016853 (6.6%)" "carbohydrate metabolic process (31.1%) N-acetylglucosamine metabolic process (31.1%)" "glucosamine-6-phosphate deaminase activity (31.1%) isomerase activity (6.6%)" "IPR003737 (14.3%) IPR004547 (14.3%) IPR006148 (14.3%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.3%) Glucosamine-6-phosphate isomerase (14.3%) Glucosamine/galactosamine-6-phosphate isomerase (14.3%)" YKGELCVVNAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (47.4%) GO:0003824 (26.3%) GO:0016874 (21.1%)" "ATP binding (47.4%) catalytic activity (26.3%) ligase activity (21.1%)" "IPR003781 (19.6%) IPR013815 (19.6%) IPR016102 (19.6%)" "CoA-binding (19.6%) ATP-grasp fold, subdomain 1 (19.6%) Succinyl-CoA synthetase-like (19.6%)" VYLFEDLRPTPEMSFAIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (23.9%) GO:0006166 (23.9%)" "GO:0000287 (23.9%) GO:0008973 (23.9%) GO:0004614 (4.3%)" "carbohydrate metabolic process (23.9%) purine ribonucleoside salvage (23.9%)" "magnesium ion binding (23.9%) phosphopentomutase activity (23.9%) phosphoglucomutase activity (4.3%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" YMDTPQSNPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.14.12 (88.9%) 3.4.-.- (11.1%)" "Xaa-Xaa-Pro tripeptidyl-peptidase (88.9%) Acting on peptide bonds (peptidases) (11.1%)" GO:0006508 (33.3%) "GO:0008236 (33.3%) GO:0008239 (33.3%)" proteolysis (33.3%) "serine-type peptidase activity (33.3%) dipeptidyl-peptidase activity (33.3%)" "IPR001375 (25.2%) IPR002469 (25.2%) IPR050278 (25.2%)" "Peptidase S9, prolyl oligopeptidase, catalytic domain (25.2%) Dipeptidylpeptidase IV, N-terminal domain (25.2%) Serine protease S9B/DPPIV (25.2%)" EKLPDIIGEILNSEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides DKACVDECPVDCIYEGSR Actinomycetes Bacteria Bacillati Actinomycetota Actinomycetes "GO:0009055 (24%) GO:0046872 (24%) GO:0051538 (24%)" "electron transfer activity (24%) metal ion binding (24%) 3 iron, 4 sulfur cluster binding (24%)" "IPR000813 (20%) IPR017896 (20%) IPR017900 (20%)" "7Fe ferredoxin (20%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (20%) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (20%)" FVLVGFKPEEWEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.20.4.1 (100%) arsenate reductase (glutathione/glutaredoxin) (100%) GO:0008794 (100%) arsenate reductase (glutaredoxin) activity (100%) "IPR006504 (33.3%) IPR006660 (33.3%) IPR036249 (33.3%)" "Transcriptional regulator Spx/MgsR (33.3%) Arsenate reductase-like (33.3%) Thioredoxin-like superfamily (33.3%)" GKFADIIVAIGPVDEDFTQGGLQFIDEVKGGNVPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (20.8%) GO:0005737 (18.8%) "GO:0003746 (20.8%) GO:0005525 (20.8%) GO:0003924 (18.8%)" ribosome disassembly (20.8%) cytoplasm (18.8%) "translation elongation factor activity (20.8%) GTP binding (20.8%) GTPase activity (18.8%)" "IPR000640 (6.6%) IPR005517 (6.6%) IPR014721 (6.6%)" "Elongation factor EFG, domain V-like (6.6%) Translation elongation factor EFG/EF2, domain IV (6.6%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.6%)" LTSDKLFVAANNISGPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.115 (100%) UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (100%) GO:0016829 (100%) lyase activity (100%) "IPR003869 (25%) IPR020025 (25%) IPR036291 (25%)" "Polysaccharide biosynthesis protein, CapD-like domain (25%) UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (25%) NAD(P)-binding domain superfamily (25%)" SKELCTIPIIASINCYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.3.1.1 (100%) dihydrouracil dehydrogenase (NAD(+)) (100%) "GO:0006210 (12%) GO:0006212 (12%) GO:0006222 (8%)" GO:0005737 (16%) "GO:0004152 (14%) GO:0002058 (12%) GO:0050661 (12%)" "thymine catabolic process (12%) uracil catabolic process (12%) UMP biosynthetic process (8%)" cytoplasm (16%) "dihydroorotate dehydrogenase activity (14%) uracil binding (12%) NADP binding (12%)" "IPR005720 (30.8%) IPR012135 (30.8%) IPR013785 (30.8%)" "Dihydroorotate dehydrogenase, catalytic (30.8%) Dihydroorotate dehydrogenase, class 1/ 2 (30.8%) Aldolase-type TIM barrel (30.8%)" KFDGDPYCVIPEELAVQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0003755 (93.8%) GO:0016853 (3.1%) GO:0046872 (3.1%)" "peptidyl-prolyl cis-trans isomerase activity (93.8%) isomerase activity (3.1%) metal ion binding (3.1%)" "IPR000297 (25%) IPR027304 (25%) IPR046357 (25%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (25%) Trigger factor/SurA domain superfamily (25%) Peptidyl-prolyl cis-trans isomerase domain superfamily (25%)" NVKVPVLLLINK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0000028 (14.3%) "GO:0005829 (14.3%) GO:0005886 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%) GO:0043024 (14.3%)" ribosomal small subunit assembly (14.3%) "cytosol (14.3%) plasma membrane (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%) ribosomal small subunit binding (14.3%)" "IPR004044 (12.5%) IPR005225 (12.5%) IPR005662 (12.5%)" "K Homology domain, type 2 (12.5%) Small GTP-binding domain (12.5%) GTPase Era-like (12.5%)" VSVHDIVHPTTGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" VLDVIDLELPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (13.9%) GO:0006526 (13.9%) GO:0006541 (13.9%)" GO:0005737 (13.9%) "GO:0004088 (13.9%) GO:0005524 (13.9%) GO:0046872 (13.9%)" "pyrimidine nucleotide biosynthetic process (13.9%) L-arginine biosynthetic process (13.9%) glutamine metabolic process (13.9%)" cytoplasm (13.9%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.9%) ATP binding (13.9%) metal ion binding (13.9%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" SQFQYSSTMQIPVLKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (16.7%) "GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "ribosome (16.7%) ribonucleoprotein complex (16.7%)" "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR002132 (20%) IPR020930 (20%) IPR022803 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5, bacteria (20%) Large ribosomal subunit protein uL5 domain superfamily (20%)" ALPSYVEANVNYTVDADGKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" YYRPENAFEHSVLTR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.9%) GO:0006044 (32.9%)" "GO:0004342 (32.9%) GO:0016853 (1.4%)" "carbohydrate metabolic process (32.9%) N-acetylglucosamine metabolic process (32.9%)" "glucosamine-6-phosphate deaminase activity (32.9%) isomerase activity (1.4%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" QAIVNEQAGTTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) GO:0042254 (31.4%) "GO:0005525 (31.4%) GO:0043022 (31.4%) GO:0016787 (5.9%)" ribosome biogenesis (31.4%) "GTP binding (31.4%) ribosome binding (31.4%) hydrolase activity (5.9%)" "IPR005225 (14.3%) IPR006073 (14.3%) IPR015946 (14.3%)" "Small GTP-binding domain (14.3%) GTP binding domain (14.3%) K homology domain-like, alpha/beta (14.3%)" AKEFIANPYDDENLPEK Pseudomonadati Bacteria Pseudomonadati GO:0015031 (33.3%) GO:0005886 (33.3%) GO:0022857 (33.3%) protein transport (33.3%) plasma membrane (33.3%) transmembrane transporter activity (33.3%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) MLQSALQTATTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.2.2 (66.7%) 1.2.5.1 (33.3%)" "Deleted entry (66.7%) pyruvate dehydrogenase (quinone) (33.3%)" GO:0019752 (25%) "GO:0000287 (25%) GO:0030976 (25%) GO:0003824 (21.9%)" carboxylic acid metabolic process (25%) "magnesium ion binding (25%) thiamine pyrophosphate binding (25%) catalytic activity (21.9%)" "IPR000399 (11.1%) IPR011766 (11.1%) IPR012000 (11.1%)" "TPP-binding enzyme, conserved site (11.1%) Thiamine pyrophosphate enzyme, TPP-binding (11.1%) Thiamine pyrophosphate enzyme, central domain (11.1%)" HAQGVDITR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.1.3.1 (51.4%) 6.4.1.1 (40%) 4.1.1.112 (5.7%)" "methylmalonyl-CoA carboxytransferase (51.4%) pyruvate carboxylase (40%) oxaloacetate decarboxylase (5.7%)" GO:0006094 (20.2%) "GO:0005737 (20.2%) GO:0016020 (0.3%)" "GO:0003824 (29.7%) GO:0004736 (22.1%) GO:0047154 (5.7%)" gluconeogenesis (20.2%) "cytoplasm (20.2%) membrane (0.3%)" "catalytic activity (29.7%) pyruvate carboxylase activity (22.1%) methylmalonyl-CoA carboxytransferase activity (5.7%)" "IPR013785 (23.8%) IPR000891 (23.7%) IPR003379 (23%)" "Aldolase-type TIM barrel (23.8%) Pyruvate carboxyltransferase (23.7%) Carboxylase, conserved domain (23%)" ELDLLKELSTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (13.3%) GO:0006526 (13.3%) GO:0006541 (13.3%)" GO:0005737 (13.3%) "GO:0004088 (13.3%) GO:0005524 (13.3%) GO:0046872 (13.3%)" "pyrimidine nucleotide biosynthetic process (13.3%) L-arginine biosynthetic process (13.3%) glutamine metabolic process (13.3%)" cytoplasm (13.3%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.3%) ATP binding (13.3%) metal ion binding (13.3%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" LKLYGEHHAVLMDHR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.3%) GO:0006879 (14.3%)" GO:0005829 (14.3%) "GO:0004322 (14.3%) GO:0008198 (14.3%) GO:0008199 (14.3%)" "iron ion transport (14.3%) intracellular iron ion homeostasis (14.3%)" cytosol (14.3%) "ferroxidase activity (14.3%) ferrous iron binding (14.3%) ferric iron binding (14.3%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" AGSIINMASVVGVHGNAGQANYSASK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) GO:0006633 (33%) "GO:0004316 (33%) GO:0051287 (33%) GO:0016491 (1.1%)" fatty acid biosynthetic process (33%) "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33%) NAD binding (33%) oxidoreductase activity (1.1%)" "IPR002347 (16.7%) IPR011284 (16.7%) IPR020904 (16.7%)" "Short-chain dehydrogenase/reductase SDR (16.7%) 3-oxoacyl-(acyl-carrier-protein) reductase (16.7%) Short-chain dehydrogenase/reductase, conserved site (16.7%)" LFPNTYGMPIVTFEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" ASQQFPNDYR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" NKYLGEHGGIASTSYGDQYGSVPSSAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (97.5%) GO:0004180 (2.5%) cell outer membrane (97.5%) carboxypeptidase activity (2.5%) "IPR012910 (14.8%) IPR039426 (14.8%) IPR023996 (14.4%)" "TonB-dependent receptor, plug domain (14.8%) TonB-dependent receptor-like (14.8%) TonB-dependent outer membrane protein, SusC/RagA (14.4%)" GFAWLDTGTHDSLSEASTFVEVIEKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.24 (100%) glucose-1-phosphate thymidylyltransferase (100%) "GO:0008879 (50%) GO:0046872 (50%)" "glucose-1-phosphate thymidylyltransferase activity (50%) metal ion binding (50%)" "IPR005835 (33.3%) IPR005907 (33.3%) IPR029044 (33.3%)" "Nucleotidyl transferase domain (33.3%) Glucose-1-phosphate thymidylyltransferase, short form (33.3%) Nucleotide-diphospho-sugar transferases (33.3%)" WDAAPELPGAMQFGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (33.9%) "GO:0008448 (33.9%) GO:0046872 (32%) GO:0016787 (0.2%)" N-acetylglucosamine catabolic process (33.9%) "N-acetylglucosamine-6-phosphate deacetylase activity (33.9%) metal ion binding (32%) hydrolase activity (0.2%)" "IPR006680 (25.1%) IPR011059 (25.1%) IPR032466 (25.1%)" "Amidohydrolase-related (25.1%) Metal-dependent hydrolase, composite domain superfamily (25.1%) Metal-dependent hydrolase (25.1%)" LYGSDKPDIR root "6.1.1.12 (54.3%) 6.1.1.23 (45.2%) 6.3.5.- (0.3%)" "aspartate--tRNA ligase (54.3%) aspartate--tRNA(Asn) ligase (45.2%) Carbon--nitrogen ligases with glutamine as amido-N-donor (0.3%)" "GO:0006422 (18.5%) GO:0070146 (0.2%) GO:0006450 (0.1%)" "GO:0005737 (15.8%) GO:0005739 (2.9%) GO:0016020 (0%)" "GO:0005524 (18.7%) GO:0004815 (18.7%) GO:0003676 (15.8%)" "aspartyl-tRNA aminoacylation (18.5%) mitochondrial aspartyl-tRNA aminoacylation (0.2%) regulation of translational fidelity (0.1%)" "cytoplasm (15.8%) mitochondrion (2.9%) membrane (0%)" "ATP binding (18.7%) aspartate-tRNA ligase activity (18.7%) nucleic acid binding (15.8%)" "IPR004364 (9.7%) IPR004115 (9.7%) IPR045864 (9.7%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (9.7%) GAD-like domain superfamily (9.7%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (9.7%)" VKESLEQRPDVEQADVSITEAHVTGTASAEQLIETIK root "7.2.2.8 (92.5%) 3.6.3.4 (3.8%) 3.6.3.- (3.1%)" "P-type Cu(+) transporter (92.5%) Transferred entry: 7.2.2.9 (3.8%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (3.1%)" "GO:0055070 (11.1%) GO:0075523 (10.4%) GO:0060003 (10.2%)" "GO:0005886 (10.8%) GO:0005737 (10.3%) GO:0016020 (0.4%)" "GO:0005507 (11.1%) GO:0043682 (11.1%) GO:0005524 (10.4%)" "copper ion homeostasis (11.1%) viral translational frameshifting (10.4%) copper ion export (10.2%)" "plasma membrane (10.8%) cytoplasm (10.3%) membrane (0.4%)" "copper ion binding (11.1%) P-type divalent copper transporter activity (11.1%) ATP binding (10.4%)" "IPR006121 (9.3%) IPR036163 (9.3%) IPR017969 (8.9%)" "Heavy metal-associated domain, HMA (9.3%) Heavy metal-associated domain superfamily (9.3%) Heavy-metal-associated, conserved site (8.9%)" TTNTHTLQIEEILELLPHR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "4.2.1.59 (99%) 4.2.1.- (1%)" "3-hydroxyacyl-[acyl-carrier-protein] dehydratase (99%) Hydro-lyases (1%)" "GO:0009245 (20%) GO:0006633 (19.6%)" "GO:0005737 (20%) GO:0016020 (20%)" "GO:0019171 (16.9%) GO:0016836 (2.7%) GO:0016829 (0.8%)" "lipid A biosynthetic process (20%) fatty acid biosynthetic process (19.6%)" "cytoplasm (20%) membrane (20%)" "(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (16.9%) hydro-lyase activity (2.7%) lyase activity (0.8%)" "IPR029069 (33.7%) IPR013114 (33.6%) IPR010084 (32.7%)" "HotDog domain superfamily (33.7%) Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ (33.6%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (32.7%)" MEENPVTLKPGMVISDEPAMYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.9 (100%) Xaa-Pro dipeptidase (100%) GO:0005737 (31.6%) "GO:0046872 (31.6%) GO:0070006 (31.6%) GO:0102009 (3.5%)" cytoplasm (31.6%) "metal ion binding (31.6%) metalloaminopeptidase activity (31.6%) proline dipeptidase activity (3.5%)" "IPR000587 (14.3%) IPR000994 (14.3%) IPR029149 (14.3%)" "Creatinase, N-terminal (14.3%) Peptidase M24 (14.3%) Creatinase/Aminopeptidase P/Spt16, N-terminal (14.3%)" GVEVDMPTEYGHFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.5.4.25 (50%) 4.1.99.12 (50%)" "GTP cyclohydrolase II (50%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (50%)" GO:0009231 (12.5%) GO:0005829 (12.5%) "GO:0000287 (12.5%) GO:0003935 (12.5%) GO:0005525 (12.5%)" riboflavin biosynthetic process (12.5%) cytosol (12.5%) "magnesium ion binding (12.5%) GTP cyclohydrolase II activity (12.5%) GTP binding (12.5%)" "IPR000422 (16.7%) IPR000926 (16.7%) IPR016299 (16.7%)" "3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB (16.7%) GTP cyclohydrolase II, RibA (16.7%) Riboflavin biosynthesis protein RibBA (16.7%)" IDGDIQFVDENGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) IPR029044 (100%) Nucleotide-diphospho-sugar transferases (100%) QTINPIGQEINTLGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011051 (33.3%) IPR013096 (33.3%) IPR014710 (33.3%)" "RmlC-like cupin domain superfamily (33.3%) Cupin 2, conserved barrel (33.3%) RmlC-like jelly roll fold (33.3%)" QIVANAGKEGAVVVQK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.7%) GO:0005737 (15.5%) "GO:0005524 (17.7%) GO:0140662 (17.7%) GO:0016853 (16%)" protein refolding (17.7%) cytoplasm (15.5%) "ATP binding (17.7%) ATP-dependent protein folding chaperone (17.7%) isomerase activity (16%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR027413 (16.7%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like equatorial domain superfamily (16.7%)" WAYVVGSAIALKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR025964 (100%) GGGtGRT protein (100%) GPLTTPIGGGIR root 1.1.1.42 (100%) isocitrate dehydrogenase (NADP(+)) (100%) "GO:0006099 (20.2%) GO:0006097 (19.7%)" "GO:0004450 (20.2%) GO:0000287 (19.7%) GO:0051287 (19.7%)" "tricarboxylic acid cycle (20.2%) glyoxylate cycle (19.7%)" "isocitrate dehydrogenase (NADP+) activity (20.2%) magnesium ion binding (19.7%) NAD binding (19.7%)" "IPR004439 (33.4%) IPR024084 (33.4%) IPR019818 (32.7%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (33.4%) Isopropylmalate dehydrogenase-like domain (33.4%) Isocitrate/isopropylmalate dehydrogenase, conserved site (32.7%)" ALSNPDLYEGDGELR root "GO:0006457 (0.1%) GO:0006974 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (19.6%) GO:0005829 (0.1%) GO:0005886 (0%)" "GO:0005524 (20%) GO:0016887 (20%) GO:0051082 (20%)" "protein folding (0.1%) DNA damage response (0.1%) response to heat (0.1%)" "cytoplasm (19.6%) cytosol (0.1%) plasma membrane (0%)" "ATP binding (20%) ATP hydrolysis activity (20%) unfolded protein binding (20%)" "IPR001404 (14.5%) IPR019805 (14.5%) IPR020575 (14.5%)" "Heat shock protein Hsp90 family (14.5%) Heat shock protein Hsp90, conserved site (14.5%) Heat shock protein Hsp90, N-terminal (14.5%)" QAVFPLSQHIGAPATAIVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.-.-.- (100%) Translocases (100%) GO:0022900 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0046872 (20%) GO:0051539 (20%)" electron transport chain (20%) plasma membrane (20%) "electron transfer activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR010208 (14.3%) IPR011538 (14.3%) IPR017896 (14.3%)" "Ion-translocating oxidoreductase complex, subunit RnfC/RsxC (14.3%) NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain (14.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14.3%)" ILYGMMELGNTSDKPYKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.6.2.2 (99%) 5.99.1.3 (1%)" "DNA topoisomerase (ATP-hydrolyzing) (99%) Transferred entry: 5.6.2.2 (1%)" "GO:0006265 (12.9%) GO:0006261 (10.9%)" "GO:0005737 (12.9%) GO:0009330 (12.9%) GO:0005694 (11.8%)" "GO:0003677 (12.9%) GO:0005524 (12.9%) GO:0034335 (11%)" "DNA topological change (12.9%) DNA-templated DNA replication (10.9%)" "cytoplasm (12.9%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.9%) chromosome (11.8%)" "DNA binding (12.9%) ATP binding (12.9%) DNA negative supercoiling activity (11%)" "IPR002205 (12.9%) IPR013758 (12.9%) IPR013760 (12.9%)" "DNA topoisomerase, type IIA, domain A (12.9%) DNA topoisomerase, type IIA, domain A, alpha-beta (12.9%) DNA topoisomerase, type IIA-like domain superfamily (12.9%)" DAMLSNMACSLIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.3%) IPR036373 (33.3%) IPR047859 (33.3%)" "Large ribosomal subunit protein bL17 (33.3%) Large ribosomal subunit protein bL17 superfamily (33.3%) Large ribosomal subunit protein bL17, conserved site (33.3%)" YQNIVSLGDVAGIPTSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.8.2.3 (100%) sulfide-cytochrome-c reductase (flavocytochrome c) (100%) GO:0070221 (29.6%) "GO:0070224 (29.6%) GO:0071949 (29.6%) GO:0070225 (11.1%)" sulfide oxidation, using sulfide:quinone oxidoreductase (29.6%) "sulfide:quinone oxidoreductase activity (29.6%) FAD binding (29.6%) sulfide dehydrogenase activity (11.1%)" "IPR006311 (24.2%) IPR015904 (24.2%) IPR023753 (24.2%)" "Twin-arginine translocation pathway, signal sequence (24.2%) Sulphide quinone-reductase (24.2%) FAD/NAD(P)-binding domain (24.2%)" QAEADIVIIAACGER Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (21.8%) GO:0046034 (3.2%) GO:1902600 (0.1%)" "GO:0005524 (25.1%) GO:0046961 (25.1%) GO:0046933 (21.8%)" "proton motive force-driven plasma membrane ATP synthesis (21.8%) ATP metabolic process (3.2%) proton transmembrane transport (0.1%)" "ATP binding (25.1%) proton-transporting ATPase activity, rotational mechanism (25.1%) proton-transporting ATP synthase activity, rotational mechanism (21.8%)" "IPR000194 (13.3%) IPR022878 (13.3%) IPR027417 (13.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (13.3%) V-type ATP synthase catalytic alpha chain (13.3%) P-loop containing nucleoside triphosphate hydrolase (13.3%)" RTDAEVIAQCPWASTGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.2.-.- (100%) Acting on the aldehyde or oxo group of donors (100%) "GO:0016491 (88.2%) GO:0019164 (5.9%) GO:0043807 (5.9%)" "oxidoreductase activity (88.2%) pyruvate synthase activity (5.9%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity (5.9%)" "IPR002880 (20%) IPR009014 (20%) IPR029061 (20%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%) Thiamin diphosphate-binding fold (20%)" AQAANFPFCTIEPNVGVITVPDER Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0005737 (20.3%) "GO:0005525 (20.3%) GO:0016887 (20.3%) GO:0005524 (20.1%)" cytoplasm (20.3%) "GTP binding (20.3%) ATP hydrolysis activity (20.3%) ATP binding (20.1%)" "IPR006073 (10.1%) IPR027417 (10.1%) IPR031167 (10.1%)" "GTP binding domain (10.1%) P-loop containing nucleoside triphosphate hydrolase (10.1%) OBG-type guanine nucleotide-binding (G) domain (10.1%)" RAVIESENSAERDQLLENLQEGMEVK root "GO:0006412 (24.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.6%) GO:0005840 (0.5%) GO:1990904 (0.1%)" "GO:0003735 (24.8%) GO:0003729 (24.7%) GO:0016491 (0.1%)" "translation (24.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.6%) ribosome (0.5%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.8%) mRNA binding (24.7%) oxidoreductase activity (0.1%)" "IPR003029 (20.2%) IPR012340 (20.2%) IPR050437 (20.2%)" "S1 domain (20.2%) Nucleic acid-binding, OB-fold (20.2%) Small ribosomal subunit protein bS1-like (20.2%)" GVAEALGISLEEALKEDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" GO:0005737 (16.7%) "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16.7%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" cytoplasm (16.7%) "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16.7%)" "IPR002226 (12.5%) IPR010582 (12.5%) IPR011614 (12.5%)" "Catalase haem-binding site (12.5%) Catalase immune-responsive domain (12.5%) Catalase core domain (12.5%)" LRPQDFEHISYPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006508 (33.3%) "GO:0004222 (33.3%) GO:0046872 (33.3%)" proteolysis (33.3%) "metalloendopeptidase activity (33.3%) metal ion binding (33.3%)" "IPR001431 (20%) IPR007863 (20%) IPR011249 (20%)" "Peptidase M16, zinc-binding site (20%) Peptidase M16, C-terminal (20%) Metalloenzyme, LuxS/M16 peptidase-like (20%)" LGSQFHIPHGLANALLICNVIR root "1.1.1.1 (59.2%) 1.2.1.10 (40.8%)" "alcohol dehydrogenase (59.2%) acetaldehyde dehydrogenase (acetylating) (40.8%)" "GO:0015976 (16%) GO:0006066 (15.9%) GO:0006115 (0%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0046872 (24.4%) GO:0004022 (23%) GO:0008774 (17.9%)" "carbon utilization (16%) alcohol metabolic process (15.9%) ethanol biosynthetic process (0%)" "cytosol (0%) membrane (0%)" "metal ion binding (24.4%) alcohol dehydrogenase (NAD+) activity (23%) acetaldehyde dehydrogenase (acetylating) activity (17.9%)" "IPR039697 (12%) IPR056798 (12%) IPR018211 (11.9%)" "Iron-type alcohol dehydrogenase-like (12%) Fe-containing alcohol dehydrogenase-like, C-terminal (12%) Alcohol dehydrogenase, iron-type, conserved site (11.9%)" EGIHDVTFVVCNTDNQALAESPVPVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0000917 (14.5%) GO:0043093 (13.6%) GO:0051258 (13.6%)" "GO:0005737 (14.5%) GO:0032153 (14.5%)" "GO:0003924 (14.5%) GO:0005525 (14.5%)" "division septum assembly (14.5%) FtsZ-dependent cytokinesis (13.6%) protein polymerization (13.6%)" "cytoplasm (14.5%) cell division site (14.5%)" "GTPase activity (14.5%) GTP binding (14.5%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" ALQALSDHLFNNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.3%) GO:0009090 (17.3%) GO:0009088 (13.3%)" GO:0005829 (17.3%) "GO:0004072 (17.3%) GO:0005524 (17.3%)" "lysine biosynthetic process via diaminopimelate (17.3%) homoserine biosynthetic process (17.3%) threonine biosynthetic process (13.3%)" cytosol (17.3%) "aspartate kinase activity (17.3%) ATP binding (17.3%)" "IPR001048 (14.3%) IPR001341 (14.3%) IPR005260 (14.3%)" "Aspartate/glutamate/uridylate kinase (14.3%) Aspartate kinase (14.3%) Aspartate kinase, monofunctional class (14.3%)" ENKIEIDNTSSHPIFCPGTNFYF Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR019707 (50%) IPR036388 (50%)" "MJ1608-like (50%) Winged helix-like DNA-binding domain superfamily (50%)" YNGQVDEITPAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.2.4 (100%) D-alanine--D-alanine ligase (100%) "GO:0071555 (14.6%) GO:0008360 (13.8%) GO:0009252 (13.8%)" GO:0005737 (13.8%) "GO:0005524 (14.6%) GO:0008716 (14.6%) GO:0046872 (14.6%)" "cell wall organization (14.6%) regulation of cell shape (13.8%) peptidoglycan biosynthetic process (13.8%)" cytoplasm (13.8%) "ATP binding (14.6%) D-alanine-D-alanine ligase activity (14.6%) metal ion binding (14.6%)" "IPR000291 (14.3%) IPR005905 (14.3%) IPR011095 (14.3%)" "D-alanine--D-alanine ligase/VANA/B/C, conserved site (14.3%) D-alanine--D-alanine ligase (14.3%) D-alanine--D-alanine ligase, C-terminal (14.3%)" NEEWREDSKSENTDAGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" APRPAPTPQAPAQNTTPVTK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0051302 (23.8%) GO:1901891 (23.8%) GO:0000902 (21.4%)" "GO:0005829 (2.4%) GO:0060187 (2.4%)" "GO:0004857 (2.4%) GO:0042802 (2.4%)" "regulation of cell division (23.8%) regulation of cell septum assembly (23.8%) cell morphogenesis (21.4%)" "cytosol (2.4%) cell pole (2.4%)" "enzyme inhibitor activity (2.4%) identical protein binding (2.4%)" "IPR007874 (21.2%) IPR013033 (21.2%) IPR005526 (19.2%)" "Septum formation inhibitor MinC, N-terminal (21.2%) Septum formation inhibitor MinC (21.2%) Septum formation inhibitor MinC, C-terminal (19.2%)" AAIGIPEEELR Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (25%) GO:0030388 (25%)" "GO:0004332 (25%) GO:0008270 (25%)" "glycolytic process (25%) fructose 1,6-bisphosphate metabolic process (25%)" "fructose-bisphosphate aldolase activity (25%) zinc ion binding (25%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" LMPVEDVFSITGR root "3.6.5.3 (99.9%) 2.7.7.6 (0.1%)" "protein-synthesizing GTPase (99.9%) DNA-directed RNA polymerase (0.1%)" "GO:0006414 (0%) GO:0006351 (0%) GO:0006633 (0%)" "GO:0005829 (17.2%) GO:0032045 (7.3%) GO:0005737 (0.3%)" "GO:0003746 (17.6%) GO:0005525 (17.6%) GO:0003924 (17.5%)" "translational elongation (0%) DNA-templated transcription (0%) fatty acid biosynthetic process (0%)" "cytosol (17.2%) guanyl-nucleotide exchange factor complex (7.3%) cytoplasm (0.3%)" "translation elongation factor activity (17.6%) GTP binding (17.6%) GTPase activity (17.5%)" "IPR050055 (8.6%) IPR009000 (8.6%) IPR027417 (8.6%)" "Elongation factor Tu GTPase (8.6%) Translation protein, beta-barrel domain superfamily (8.6%) P-loop containing nucleoside triphosphate hydrolase (8.6%)" VFACEVPYKEYLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis FDFIKYPDPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.2%) "GO:0003746 (25.2%) GO:0005525 (25.2%) GO:0003924 (24.5%)" ribosome disassembly (25.2%) "translation elongation factor activity (25.2%) GTP binding (25.2%) GTPase activity (24.5%)" "IPR000640 (7.7%) IPR005517 (7.7%) IPR009000 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translation elongation factor EFG/EF2, domain IV (7.7%) Translation protein, beta-barrel domain superfamily (7.7%)" RVVVFSPHPDDDVISMGGTIRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.3%) GO:0006044 (31.9%)" "GO:0004342 (32.7%) GO:0016853 (3.2%)" "carbohydrate metabolic process (32.3%) N-acetylglucosamine metabolic process (31.9%)" "glucosamine-6-phosphate deaminase activity (32.7%) isomerase activity (3.2%)" "IPR003737 (15.3%) IPR052960 (15.3%) IPR024078 (15.1%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (15.3%) Glucosamine-6-phosphate deaminase-like (15.3%) Putative deacetylase LmbE-like domain superfamily (15.1%)" VAAALEAVGALHLR AVLVNIFGGIVR root "6.2.1.5 (99.9%) 6.2.1.- (0%) 6.2.1.9 (0%)" "succinate--CoA ligase (ADP-forming) (99.9%) Acid--thiol ligases (0%) malate--CoA ligase (0%)" "GO:0006099 (13.4%) GO:0006104 (13.3%) GO:0006086 (0%)" "GO:0005829 (13.3%) GO:0042709 (13.3%) GO:0009361 (0%)" "GO:0004775 (13.4%) GO:0005524 (13.1%) GO:0000287 (12.9%)" "tricarboxylic acid cycle (13.4%) succinyl-CoA metabolic process (13.3%) pyruvate decarboxylation to acetyl-CoA (0%)" "cytosol (13.3%) succinate-CoA ligase complex (13.3%) succinate-CoA ligase complex (ADP-forming) (0%)" "succinate-CoA ligase (ADP-forming) activity (13.4%) ATP binding (13.1%) magnesium ion binding (12.9%)" "IPR005811 (14.5%) IPR016102 (14.5%) IPR017866 (14.4%)" "ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.5%) Succinyl-CoA synthetase-like (14.5%) Succinyl-CoA synthetase, beta subunit, conserved site (14.4%)" GFNIISAAEAASYIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.8.3.- (80%) 3.1.2.1 (20%)" "CoA-transferases (80%) acetyl-CoA hydrolase (20%)" "GO:0006083 (25.4%) GO:0006084 (23.8%)" "GO:0003986 (25.4%) GO:0008775 (25.4%)" "acetate metabolic process (25.4%) acetyl-CoA metabolic process (23.8%)" "acetyl-CoA hydrolase activity (25.4%) acetate CoA-transferase activity (25.4%)" "IPR003702 (17.2%) IPR037171 (17.2%) IPR046433 (17.2%)" "Acetyl-CoA hydrolase/transferase, N-terminal (17.2%) NagB/RpiA transferase-like (17.2%) Acetyl-CoA hydrolase/transferase (17.2%)" VLNDDRVAPGEGFQTHPHK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.13.11.24 (100%) quercetin 2,3-dioxygenase (100%) "GO:0046872 (92%) GO:0008127 (8%)" "metal ion binding (92%) quercetin 2,3-dioxygenase activity (8%)" "IPR003829 (20%) IPR011051 (20%) IPR012093 (20%)" "Pirin, N-terminal domain (20%) RmlC-like cupin domain superfamily (20%) Pirin (20%)" VLVKPDEAEQKTASGLYIASNAQEKPQR Collinsella aerofaciens Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella aerofaciens GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0044183 (16.7%) GO:0046872 (16.7%)" cytoplasm (16.7%) "ATP binding (16.7%) protein folding chaperone (16.7%) metal ion binding (16.7%)" "IPR011032 (25%) IPR018369 (25%) IPR020818 (25%)" "GroES-like superfamily (25%) Chaperonin GroES, conserved site (25%) GroES chaperonin family (25%)" RACEILGVPYEDQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" NQFQNNPPEVPTENNHVGSYRR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.1%) IPR006101 (7.1%) IPR006102 (7.1%)" "Beta galactosidase small chain/ domain 5 (7.1%) Glycoside hydrolase, family 2 (7.1%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.1%)" VADELVKDTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) ADHVNKLWEIIDWDVVEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.15.1.1 (100%) superoxide dismutase (100%) GO:0005737 (33.3%) "GO:0004784 (33.3%) GO:0046872 (33.3%)" cytoplasm (33.3%) "superoxide dismutase activity (33.3%) metal ion binding (33.3%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" VVSGGTDNHLFLVDLVDK root 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (16.3%) GO:0035999 (15.4%) GO:0032259 (7.7%)" "GO:0005829 (16.3%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0004372 (16.3%) GO:0030170 (16.3%) GO:0008168 (7.7%)" "glycine biosynthetic process from serine (16.3%) tetrahydrofolate interconversion (15.4%) methylation (7.7%)" "cytosol (16.3%) cytoplasm (0.1%) membrane (0.1%)" "glycine hydroxymethyltransferase activity (16.3%) pyridoxal phosphate binding (16.3%) methyltransferase activity (7.7%)" "IPR015422 (14.5%) IPR015424 (14.5%) IPR039429 (14.5%)" "Pyridoxal phosphate-dependent transferase, small domain (14.5%) Pyridoxal phosphate-dependent transferase (14.5%) Serine hydroxymethyltransferase-like domain (14.5%)" KMVNDPNFKEQYIQDYLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (46.2%) IPR019734 (46.2%) IPR013105 (7.7%)" "Tetratricopeptide-like helical domain superfamily (46.2%) Tetratricopeptide repeat (46.2%) Tetratricopeptide repeat 2 (7.7%)" DVQDLNDNSIPADVAEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR004216 (11.1%) IPR005763 (11.1%) IPR009015 (11.1%)" "L-fucose/L-arabinose isomerase, C-terminal (11.1%) L-fucose isomerase (11.1%) L-fucose isomerase, N-terminal/central domain superfamily (11.1%)" VVTISGPDGYIYDPAGISGEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006537 (25.9%) GO:0005829 (24.1%) "GO:0004354 (25.9%) GO:0000166 (24.1%)" glutamate biosynthetic process (25.9%) cytosol (24.1%) "glutamate dehydrogenase (NADP+) activity (25.9%) nucleotide binding (24.1%)" "IPR006095 (12.3%) IPR006096 (12.3%) IPR006097 (12.3%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (12.3%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (12.3%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.3%)" EISYVAGELFTEALVCK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis EANAETNATPAESVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.3%) GO:0005829 (14.3%) "GO:0003723 (14.3%) GO:0004386 (14.3%) GO:0005524 (14.3%)" DNA-templated transcription termination (14.3%) cytosol (14.3%) "RNA binding (14.3%) helicase activity (14.3%) ATP binding (14.3%)" "IPR000194 (10%) IPR003593 (10%) IPR004665 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) Transcription termination factor Rho (10%)" SSMNALSTGASNPFER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.3.1.1 (66.7%) 1.3.98.1 (33.3%)" "dihydrouracil dehydrogenase (NAD(+)) (66.7%) dihydroorotate oxidase (fumarate) (33.3%)" "GO:0006207 (24.4%) GO:0044205 (20.9%) GO:0006222 (2.3%)" GO:0005737 (24.4%) "GO:0004152 (20.9%) GO:0004159 (3.5%) GO:1990663 (3.5%)" "'de novo' pyrimidine nucleobase biosynthetic process (24.4%) 'de novo' UMP biosynthetic process (20.9%) UMP biosynthetic process (2.3%)" cytoplasm (24.4%) "dihydroorotate dehydrogenase activity (20.9%) dihydropyrimidine dehydrogenase (NAD+) activity (3.5%) dihydroorotate dehydrogenase (fumarate) activity (3.5%)" "IPR013785 (25.6%) IPR050074 (25.6%) IPR005720 (24.4%)" "Aldolase-type TIM barrel (25.6%) Dihydroorotate dehydrogenase (25.6%) Dihydroorotate dehydrogenase, catalytic (24.4%)" FLAFEQTFK root "1.4.1.4 (97.3%) 1.4.1.3 (2%) 1.4.1.2 (0.7%)" "glutamate dehydrogenase (NADP(+)) (97.3%) glutamate dehydrogenase [NAD(P)(+)] (2%) glutamate dehydrogenase (0.7%)" "GO:0006537 (25.3%) GO:0016539 (0%)" "GO:0005829 (25.2%) GO:0005737 (0%) GO:0009986 (0%)" "GO:0004354 (25.3%) GO:0000166 (23.7%) GO:0004352 (0.3%)" "glutamate biosynthetic process (25.3%) intein-mediated protein splicing (0%)" "cytosol (25.2%) cytoplasm (0%) cell surface (0%)" "glutamate dehydrogenase (NADP+) activity (25.3%) nucleotide binding (23.7%) glutamate dehydrogenase (NAD+) activity (0.3%)" "IPR006097 (11.3%) IPR050724 (11.3%) IPR046346 (11.3%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.3%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.3%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.3%)" AQGVDVINLSVGEPDFNTPDHIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.6.1.- (99.3%) 2.6.1.1 (0.7%)" "Transaminases (99.3%) aspartate transaminase (0.7%)" GO:0006520 (33.3%) "GO:0008483 (33.5%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.5%) pyridoxal phosphate binding (33.3%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" TFYGYNDMADAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) "GO:0006633 (49.7%) GO:0032259 (0.3%)" "GO:0004318 (49.7%) GO:0008168 (0.3%)" "fatty acid biosynthetic process (49.7%) methylation (0.3%)" "enoyl-[acyl-carrier-protein] reductase (NADH) activity (49.7%) methyltransferase activity (0.3%)" "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" VNTIEERPGGAANVAMNIASLGANAR root "2.7.7.70 (48.8%) 2.7.1.167 (48.4%) 2.7.1.- (2.8%)" "D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase (48.8%) D-glycero-beta-D-manno-heptose-7-phosphate kinase (48.4%) Phosphotransferases with an alcohol group as acceptor (2.8%)" "GO:0097171 (11%) GO:0009244 (8.6%)" GO:0005829 (16.4%) "GO:0033785 (16.4%) GO:0033786 (16.4%) GO:0016773 (15.1%)" "ADP-L-glycero-beta-D-manno-heptose biosynthetic process (11%) lipopolysaccharide core region biosynthetic process (8.6%)" cytosol (16.4%) "heptose 7-phosphate kinase activity (16.4%) heptose-1-phosphate adenylyltransferase activity (16.4%) phosphotransferase activity, alcohol group as acceptor (15.1%)" "IPR002173 (13.4%) IPR011611 (13.4%) IPR029056 (13.4%)" "Carbohydrate/purine kinase, PfkB, conserved site (13.4%) Carbohydrate kinase PfkB (13.4%) Ribokinase-like (13.4%)" ATEDGVANYLSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" NHSSGHISTEEADELIQCLNER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "5.4.2.12 (85.7%) 5.4.2.- (14.3%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (85.7%) Phosphotransferases (phosphomutases) (14.3%)" GO:0006096 (32.3%) "GO:0004619 (32.3%) GO:0046872 (32.3%) GO:0016301 (3.2%)" glycolytic process (32.3%) "phosphoglycerate mutase activity (32.3%) metal ion binding (32.3%) kinase activity (3.2%)" "IPR004456 (20%) IPR006124 (20%) IPR017850 (20%)" "2,3-bisphosphoglycerate-independent phosphoglycerate mutase (20%) Metalloenzyme (20%) Alkaline-phosphatase-like, core domain superfamily (20%)" FWFDKGIDGFR root "3.2.1.93 (53.6%) 3.2.1.10 (35.7%) 3.2.1.1 (7.1%)" "alpha,alpha-phosphotrehalase (53.6%) oligo-1,6-glucosidase (35.7%) alpha-amylase (7.1%)" "GO:0009313 (27.4%) GO:0005993 (6.8%) GO:0000025 (0.9%)" GO:0005737 (8.5%) "GO:0004556 (35%) GO:0008788 (12%) GO:0004574 (6.8%)" "oligosaccharide catabolic process (27.4%) trehalose catabolic process (6.8%) maltose catabolic process (0.9%)" cytoplasm (8.5%) "alpha-amylase activity (35%) alpha,alpha-phosphotrehalase activity (12%) oligo-1,6-glucosidase activity (6.8%)" "IPR006047 (22%) IPR017853 (22%) IPR045857 (22%)" "Glycosyl hydrolase family 13, catalytic domain (22%) Glycoside hydrolase superfamily (22%) Oligo-1,6-glucosidase, domain 2 (22%)" EMIWVGGGAGMAPLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (16.9%) "GO:0005886 (16.7%) GO:0016020 (0.2%)" "GO:0016655 (16.9%) GO:0051537 (16.9%) GO:0046872 (16.7%)" sodium ion transport (16.9%) "plasma membrane (16.7%) membrane (0.2%)" "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (16.9%) 2 iron, 2 sulfur cluster binding (16.9%) metal ion binding (16.7%)" "IPR001433 (10.1%) IPR001709 (10.1%) IPR039261 (10.1%)" "Oxidoreductase FAD/NAD(P)-binding (10.1%) Flavoprotein pyridine nucleotide cytochrome reductase (10.1%) Ferredoxin-NADP reductase (FNR), nucleotide-binding domain (10.1%)" AFVFPGQGAQFVGMGK Bacteria Bacteria 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0006633 (19.8%) GO:0005829 (19.8%) "GO:0004314 (59.7%) GO:0016746 (0.5%) GO:0016740 (0.2%)" fatty acid biosynthetic process (19.8%) cytosol (19.8%) "[acyl-carrier-protein] S-malonyltransferase activity (59.7%) acyltransferase activity (0.5%) transferase activity (0.2%)" "IPR014043 (14.4%) IPR001227 (14.3%) IPR016035 (14.3%)" "Acyl transferase domain (14.4%) Acyl transferase domain superfamily (14.3%) Acyl transferase/acyl hydrolase/lysophospholipase (14.3%)" NLCYSTTVDTTNVSQVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001706 (25%) IPR018265 (25%) IPR021137 (25%)" "Large ribosomal subunit protein bL35 (25%) Large ribosomal subunit protein bL35, conserved site (25%) Large ribosomal subunit protein bL35-like (25%)" IVSVTQVSNVLGTINPVK Bacteria Bacteria 2.8.1.7 (100%) cysteine desulfurase (100%) GO:0006534 (32.4%) "GO:0030170 (32.4%) GO:0031071 (32.4%) GO:0008483 (2.7%)" cysteine metabolic process (32.4%) "pyridoxal phosphate binding (32.4%) cysteine desulfurase activity (32.4%) transaminase activity (2.7%)" "IPR000192 (16.2%) IPR010970 (16.2%) IPR015421 (16.2%)" "Aminotransferase class V domain (16.2%) Cysteine desulfurase, SufS (16.2%) Pyridoxal phosphate-dependent transferase, major domain (16.2%)" QQLEPLNEIATNLWWVWNHEGAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" IFPIESPFIESITVNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001857 (25%) IPR008991 (25%) IPR018257 (25%)" "Large ribosomal subunit protein bL19 (25%) Translation protein SH3-like domain superfamily (25%) Large ribosomal subunit protein bL19, conserved site (25%)" RSDREAAEGCVLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (46.9%) GO:0003746 (53.1%) cytoplasm (46.9%) translation elongation factor activity (53.1%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" VFTPGDKCDVLVAMNAAALK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.-.- (66.7%) 1.2.7.3 (33.3%)" "Acting on the aldehyde or oxo group of donors (66.7%) 2-oxoglutarate synthase (33.3%)" GO:0006979 (50%) "GO:0016903 (48.8%) GO:0047553 (1.2%)" response to oxidative stress (50%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors (48.8%) 2-oxoglutarate synthase activity (1.2%)" "IPR002869 (13.5%) IPR002880 (13.5%) IPR009014 (13.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (13.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (13.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (13.5%)" SGVAHLSAENDIECINYIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.-.-.- (100%) Ligases (100%) GO:0015977 (23.6%) GO:0009317 (23.6%) "GO:0004658 (24.6%) GO:0003989 (23.6%) GO:0016740 (4.7%)" carbon fixation (23.6%) acetyl-CoA carboxylase complex (23.6%) "propionyl-CoA carboxylase activity (24.6%) acetyl-CoA carboxylase activity (23.6%) transferase activity (4.7%)" "IPR011762 (20.1%) IPR029045 (20.1%) IPR034733 (20.1%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20.1%) ClpP/crotonase-like domain superfamily (20.1%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.1%)" YVVGEGDFLALGHHR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.6.3.- (50%) 1.6.3.4 (25%) 2.5.1.26 (25%)" "With oxygen as acceptor (50%) NADH oxidase (H2O-forming) (25%) alkylglycerone-phosphate synthase (25%)" "GO:0009055 (23.8%) GO:0010181 (23.8%) GO:0016491 (23.8%)" "electron transfer activity (23.8%) FMN binding (23.8%) oxidoreductase activity (23.8%)" "IPR036866 (15%) IPR045761 (15%) IPR001279 (14%)" "Ribonuclease Z/Hydroxyacylglutathione hydrolase-like (15%) ODP domain (15%) Metallo-beta-lactamase (14%)" IVTAPTCGSCGVVPAVLYHLQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.1.17 (100%) L-serine ammonia-lyase (100%) GO:0006094 (25%) "GO:0003941 (25%) GO:0046872 (25%) GO:0051539 (25%)" gluconeogenesis (25%) "L-serine ammonia-lyase activity (25%) metal ion binding (25%) 4 iron, 4 sulfur cluster binding (25%)" "IPR004644 (20%) IPR005130 (20%) IPR005131 (20%)" "Iron-sulphur-dependent L-serine dehydratase single chain form (20%) Serine dehydratase-like, alpha subunit (20%) Serine dehydratase beta chain (20%)" FEDLYDDAAAKVDEIAER Candidatus Amulumruptor caecigallinarius Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Candidatus Amulumruptor Candidatus Amulumruptor caecigallinarius "GO:0008199 (50%) GO:0016722 (50%)" "ferric iron binding (50%) oxidoreductase activity, acting on metal ions (50%)" "IPR002177 (20%) IPR008331 (20%) IPR009078 (20%)" "DNA-binding protein Dps (20%) Ferritin/DPS domain (20%) Ferritin-like superfamily (20%)" NGDMLNQPSTPQPDIPLK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae IPR020158 (100%) Protein of unknown function DUF2756 (100%) GQPEAGNKVVVIGGDNYR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (19.8%) GO:0005737 (19.8%) "GO:0004642 (19.8%) GO:0005524 (19.8%) GO:0046872 (19.8%)" 'de novo' IMP biosynthetic process (19.8%) cytoplasm (19.8%) "phosphoribosylformylglycinamidine synthase activity (19.8%) ATP binding (19.8%) metal ion binding (19.8%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" ERQEQQEQEAAELQAVTAIAEGRR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (24.5%) GO:0006352 (0.1%) GO:0006879 (0%)" "GO:0000428 (24.9%) GO:0000345 (0.1%) GO:0005829 (0%)" "GO:0003677 (24.6%) GO:0003899 (24.6%) GO:0016779 (0.3%)" "DNA-templated transcription (24.5%) DNA-templated transcription initiation (0.1%) intracellular iron ion homeostasis (0%)" "DNA-directed RNA polymerase complex (24.9%) cytosolic DNA-directed RNA polymerase complex (0.1%) cytosol (0%)" "DNA binding (24.6%) DNA-directed RNA polymerase activity (24.6%) nucleotidyltransferase activity (0.3%)" "IPR036161 (33.4%) IPR003716 (33.3%) IPR006110 (33.3%)" "RPB6/omega subunit-like superfamily (33.4%) DNA-directed RNA polymerase, omega subunit (33.3%) RNA polymerase, subunit omega/Rpo6/RPB6 (33.3%)" NYKSEEEIAEIEKACIVTADMHLTAMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0030145 (25%) GO:0070006 (25%)" proteolysis (25%) cytosol (25%) "manganese ion binding (25%) metalloaminopeptidase activity (25%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" YHAHDENNECNIGDTVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022627 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000266 (25%) IPR012340 (25%) IPR019979 (25%)" "Small ribosomal subunit protein uS17 (25%) Nucleic acid-binding, OB-fold (25%) Small ribosomal subunit protein uS17, conserved site (25%)" KGAYFANPCMVQIHPTCVPVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.3.5.1 (93.8%) 1.3.5.4 (6.3%)" "succinate dehydrogenase (93.8%) Transferred entry: 1.3.5.1 (6.3%)" GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (14.3%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (14.3%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" YIIDELDQICQR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales IPR020911 (100%) Uncharacterised protein family UPF0325 (100%) IIEEITPYISGEFTVSDIKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR027848 (100%) Protein of unknown function DUF4494 (100%) LGIHGSPTCEIVYK Pseudomonadati Bacteria Pseudomonadati "1.3.8.1 (61.3%) 1.3.99.- (22.6%) 1.3.8.- (12.9%)" "short-chain acyl-CoA dehydrogenase (61.3%) With other acceptors (22.6%) With a flavin as acceptor (12.9%)" "GO:0050660 (49.8%) GO:0003995 (29.6%) GO:0016627 (17.5%)" "flavin adenine dinucleotide binding (49.8%) acyl-CoA dehydrogenase activity (29.6%) oxidoreductase activity, acting on the CH-CH group of donors (17.5%)" "IPR009075 (9.5%) IPR052166 (9.5%) IPR006091 (9.4%)" "Acyl-CoA dehydrogenase/oxidase, C-terminal (9.5%) Diverse substrate specificity acyl-CoA dehydrogenase (9.5%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.4%)" KTTGFYQLVEFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.8%) "GO:0005737 (16.8%) GO:0005840 (16.8%) GO:1990904 (16%)" "GO:0003735 (16.8%) GO:0070181 (16.8%)" translation (16.8%) "cytoplasm (16.8%) ribosome (16.8%) ribonucleoprotein complex (16%)" "structural constituent of ribosome (16.8%) small ribosomal subunit rRNA binding (16.8%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" DYTEFWGIESNPDISTLKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.1.1.1 (62.5%) 1.1.1.- (37.5%)" "alcohol dehydrogenase (62.5%) With NAD(+) or NADP(+) as acceptor (37.5%)" GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (16.7%) IPR011322 (16.7%) IPR018211 (16.7%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (16.7%) Nitrogen regulatory PII-like, alpha/beta (16.7%) Alcohol dehydrogenase, iron-type, conserved site (16.7%)" AKVDNYKELGLNSETATVFNLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.4%) GO:0005829 (17.4%) "GO:0004612 (17.4%) GO:0005524 (17.4%) GO:0046872 (17.1%)" gluconeogenesis (17.4%) cytosol (17.4%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.4%) ATP binding (17.4%) metal ion binding (17.1%)" "IPR001272 (25.1%) IPR008210 (25.1%) IPR013035 (24.9%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.1%) Phosphoenolpyruvate carboxykinase, N-terminal (25.1%) Phosphoenolpyruvate carboxykinase, C-terminal (24.9%)" RGESSGPDVSR Bacteria Bacteria "3.4.25.2 (63%) 3.4.21.- (37%)" "HslU--HslV peptidase (63%) Serine endopeptidases (37%)" "GO:0051603 (14.4%) GO:0043335 (13.9%) GO:0006508 (0.1%)" "GO:0009376 (14.4%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0005524 (14.4%) GO:0008233 (14.4%) GO:0016887 (14.4%)" "proteolysis involved in protein catabolic process (14.4%) protein unfolding (13.9%) proteolysis (0.1%)" "HslUV protease complex (14.4%) cytosol (0%) membrane (0%)" "ATP binding (14.4%) peptidase activity (14.4%) ATP hydrolysis activity (14.4%)" "IPR003959 (16.8%) IPR027417 (16.8%) IPR050052 (16.8%)" "ATPase, AAA-type, core (16.8%) P-loop containing nucleoside triphosphate hydrolase (16.8%) ATP-dependent Clp protease ATP-binding subunit ClpX (16.8%)" AYYFQQAQNGLYAR Pseudomonadati Bacteria Pseudomonadati 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006520 (16.8%) GO:0006207 (16.3%) GO:0044205 (16.3%)" "GO:0005829 (16.4%) GO:0016020 (0.1%)" "GO:0016597 (16.8%) GO:0004070 (16.6%) GO:0016743 (0.3%)" "amino acid metabolic process (16.8%) 'de novo' pyrimidine nucleobase biosynthetic process (16.3%) 'de novo' UMP biosynthetic process (16.3%)" "cytosol (16.4%) membrane (0.1%)" "amino acid binding (16.8%) aspartate carbamoyltransferase activity (16.6%) carboxyl- or carbamoyltransferase activity (0.3%)" "IPR006131 (20.3%) IPR036901 (20.3%) IPR006130 (20%)" "Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20.3%) Aspartate/ornithine carbamoyltransferase superfamily (20.3%) Aspartate/ornithine carbamoyltransferase (20%)" AVSVLNLGTIDEPGHADNTATLK root GO:0016032 (50%) GO:0016020 (50%) viral process (50%) membrane (50%) IPR019276 (100%) Protein of unkown function DUF2303 (100%) TAMEEHLAEGAMYAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" IIGAGLPVGAYGGKK Bacillota Bacteria Bacillati Bacillota 5.4.3.8 (100%) glutamate-1-semialdehyde 2,1-aminomutase (100%) GO:0006782 (20%) GO:0005737 (20%) "GO:0008483 (20%) GO:0030170 (20%) GO:0042286 (20%)" protoporphyrinogen IX biosynthetic process (20%) cytoplasm (20%) "transaminase activity (20%) pyridoxal phosphate binding (20%) glutamate-1-semialdehyde 2,1-aminomutase activity (20%)" "IPR004639 (16.9%) IPR005814 (16.9%) IPR015421 (16.9%)" "Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase (16.9%) Aminotransferase class-III (16.9%) Pyridoxal phosphate-dependent transferase, major domain (16.9%)" DLDGTILATGFPFK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 3.1.3.25 (100%) inositol-phosphate phosphatase (100%) "GO:0006020 (11.3%) GO:0007165 (11.3%) GO:0031564 (11.2%)" "GO:0005737 (11.1%) GO:0005829 (0%)" "GO:0008934 (11.3%) GO:0046872 (11.2%) GO:0003723 (11%)" "inositol metabolic process (11.3%) signal transduction (11.3%) transcription antitermination (11.2%)" "cytoplasm (11.1%) cytosol (0%)" "inositol monophosphate 1-phosphatase activity (11.3%) metal ion binding (11.2%) RNA binding (11%)" "IPR000760 (20.4%) IPR022337 (20.4%) IPR033942 (20.2%)" "Inositol monophosphatase-like (20.4%) Inositol monophosphatase SuhB-like (20.4%) Inositol monophosphatase (20.2%)" KSVVTGVEMFR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0%) GO:0032790 (0%) GO:0070125 (0%)" "GO:0005829 (17.8%) GO:0032045 (5.3%) GO:0005737 (0.3%)" "GO:0003746 (18.3%) GO:0005525 (18.2%) GO:0003924 (17.9%)" "translational elongation (0%) ribosome disassembly (0%) mitochondrial translational elongation (0%)" "cytosol (17.8%) guanyl-nucleotide exchange factor complex (5.3%) cytoplasm (0.3%)" "translation elongation factor activity (18.3%) GTP binding (18.2%) GTPase activity (17.9%)" "IPR004161 (8.5%) IPR009000 (8.4%) IPR050055 (8.4%)" "Translation elongation factor EFTu-like, domain 2 (8.5%) Translation protein, beta-barrel domain superfamily (8.4%) Elongation factor Tu GTPase (8.4%)" DMDAQLTYNLIDKAEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis VGNTAAICIYPR root "4.1.2.4 (99.9%) 4.-.-.- (0.1%)" "deoxyribose-phosphate aldolase (99.9%) Lyases (0.1%)" "GO:0009264 (20%) GO:0016052 (20%) GO:0006018 (19.4%)" "GO:0005737 (20%) GO:0005829 (0.1%) GO:0016020 (0%)" "GO:0004139 (20%) GO:0016829 (0.3%) GO:0004645 (0%)" "deoxyribonucleotide catabolic process (20%) carbohydrate catabolic process (20%) 2-deoxyribose 1-phosphate catabolic process (19.4%)" "cytoplasm (20%) cytosol (0.1%) membrane (0%)" "deoxyribose-phosphate aldolase activity (20%) lyase activity (0.3%) 1,4-alpha-oligoglucan phosphorylase activity (0%)" "IPR002915 (25.1%) IPR011343 (25.1%) IPR013785 (25.1%)" "DeoC/FbaB/LacD aldolase (25.1%) Deoxyribose-phosphate aldolase (25.1%) Aldolase-type TIM barrel (25.1%)" RYLDEQGFLEVETPVLVNSTPEGAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.12 (100%) aspartate--tRNA ligase (100%) GO:0006422 (20%) GO:0005737 (20%) "GO:0003676 (20%) GO:0004815 (20%) GO:0005524 (20%)" aspartyl-tRNA aminoacylation (20%) cytoplasm (20%) "nucleic acid binding (20%) aspartate-tRNA ligase activity (20%) ATP binding (20%)" "IPR002312 (9.1%) IPR004115 (9.1%) IPR004364 (9.1%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.1%) GAD-like domain superfamily (9.1%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.1%)" SGAEEIKAMMENFR Bacteria Bacteria "5.4.2.2 (61.1%) 5.4.2.- (33.3%) 5.4.2.8 (5.6%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (61.1%) Phosphotransferases (phosphomutases) (33.3%) phosphomannomutase (5.6%)" "GO:0005975 (23.9%) GO:0006166 (23.9%)" "GO:0000287 (23.9%) GO:0008973 (23.9%) GO:0004614 (4.1%)" "carbohydrate metabolic process (23.9%) purine ribonucleoside salvage (23.9%)" "magnesium ion binding (23.9%) phosphopentomutase activity (23.9%) phosphoglucomutase activity (4.1%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" TGHEPDPSGQTGGIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.1.77 (100%) N-carbamoyl-D-amino-acid hydrolase (100%) GO:0033388 (36.6%) "GO:0050126 (36.6%) GO:0016746 (17.1%) GO:0047417 (9.8%)" putrescine biosynthetic process from arginine (36.6%) "N-carbamoylputrescine amidase activity (36.6%) acyltransferase activity (17.1%) N-carbamoyl-D-amino acid hydrolase activity (9.8%)" "IPR003010 (33.3%) IPR036526 (33.3%) IPR050345 (33.3%)" "Carbon-nitrogen hydrolase (33.3%) Carbon-nitrogen hydrolase superfamily (33.3%) Aliphatic Amidase/Beta-Ureidopropionase (33.3%)" AIAPNIPLVEVGIRPGEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "4.2.1.115 (63.6%) 4.2.1.- (36.4%)" "UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (63.6%) Hydro-lyases (36.4%)" GO:0016829 (100%) lyase activity (100%) "IPR003869 (25.4%) IPR036291 (25.4%) IPR051203 (25.4%)" "Polysaccharide biosynthesis protein, CapD-like domain (25.4%) NAD(P)-binding domain superfamily (25.4%) Polysaccharide Synthase-Related Protein (25.4%)" VMIHQPLGGVQGQASDIEITAR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.4.21.92 (100%) endopeptidase Clp (100%) GO:0006515 (16.4%) "GO:0005737 (16.4%) GO:0009368 (16.4%) GO:0016020 (1.5%)" "GO:0004176 (16.4%) GO:0004252 (16.4%) GO:0051117 (16.4%)" protein quality control for misfolded or incompletely synthesized proteins (16.4%) "cytoplasm (16.4%) endopeptidase Clp complex (16.4%) membrane (1.5%)" "ATP-dependent peptidase activity (16.4%) serine-type endopeptidase activity (16.4%) ATPase binding (16.4%)" "IPR001907 (29.2%) IPR023562 (29.2%) IPR029045 (29.2%)" "ATP-dependent Clp protease proteolytic subunit (29.2%) Clp protease proteolytic subunit /Translocation-enhancing protein TepA (29.2%) ClpP/crotonase-like domain superfamily (29.2%)" MEHQLTIYNTLDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.16 (100%) cysteine--tRNA ligase (100%) GO:0006423 (20%) "GO:0005829 (20%) GO:0005737 (0.2%)" "GO:0004817 (20%) GO:0005524 (20%) GO:0008270 (19.8%)" cysteinyl-tRNA aminoacylation (20%) "cytosol (20%) cytoplasm (0.2%)" "cysteine-tRNA ligase activity (20%) ATP binding (20%) zinc ion binding (19.8%)" "IPR009080 (14.3%) IPR014729 (14.3%) IPR015273 (14.3%)" "Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (14.3%) Rossmann-like alpha/beta/alpha sandwich fold (14.3%) Cysteinyl-tRNA synthetase, class Ia, DALR (14.3%)" KVIVFSPHPDDDVISMGGTLR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "3.5.99.6 (96.6%) 3.1.1.31 (3.4%)" "glucosamine-6-phosphate deaminase (96.6%) 6-phosphogluconolactonase (3.4%)" "GO:0005975 (32.4%) GO:0006044 (31.9%) GO:0006046 (0.5%)" "GO:0004342 (32.4%) GO:0016853 (1.6%) GO:0016787 (1.1%)" "carbohydrate metabolic process (32.4%) N-acetylglucosamine metabolic process (31.9%) N-acetylglucosamine catabolic process (0.5%)" "glucosamine-6-phosphate deaminase activity (32.4%) isomerase activity (1.6%) hydrolase activity (1.1%)" "IPR003737 (17.3%) IPR052960 (17.3%) IPR024078 (16.5%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (17.3%) Glucosamine-6-phosphate deaminase-like (17.3%) Putative deacetylase LmbE-like domain superfamily (16.5%)" DKDKPFLMPVEDVFSITGR Bacteria Bacteria 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (18.2%) GO:0032045 (6.1%)" "GO:0003746 (18.2%) GO:0003924 (18.2%) GO:0005525 (18.2%)" "cytosol (18.2%) guanyl-nucleotide exchange factor complex (6.1%)" "translation elongation factor activity (18.2%) GTPase activity (18.2%) GTP binding (18.2%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" IHGLADCMQGEMISLPGNR root "7.1.2.2 (96.4%) 3.6.3.14 (3.6%)" "H(+)-transporting two-sector ATPase (96.4%) Transferred entry: 7.1.2.2 (3.6%)" "GO:0006754 (0.1%) GO:0015986 (0.1%) GO:1902600 (0.1%)" "GO:0045259 (19.2%) GO:0005886 (18.9%) GO:0005739 (0%)" "GO:0005524 (19.2%) GO:0043531 (19.2%) GO:0046933 (19.2%)" "ATP biosynthetic process (0.1%) proton motive force-driven ATP synthesis (0.1%) proton transmembrane transport (0.1%)" "proton-transporting ATP synthase complex (19.2%) plasma membrane (18.9%) mitochondrion (0%)" "ATP binding (19.2%) ADP binding (19.2%) proton-transporting ATP synthase activity, rotational mechanism (19.2%)" "IPR004100 (10.1%) IPR023366 (10.1%) IPR036121 (10.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.1%) ATP synthase subunit alpha, N-terminal domain-like superfamily (10.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily (10.1%)" TAIAFADCVIVPSKDSLTER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "IPR027417 (33.7%) IPR050678 (33.3%) IPR015223 (33%)" "P-loop containing nucleoside triphosphate hydrolase (33.7%) DNA Partitioning ATPase (33.3%) ATPase MipZ (33%)" RVHVATYQAASGAGAAAMDELYEQYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000319 (16.7%) IPR000534 (16.7%) IPR005986 (16.7%)" "Aspartate-semialdehyde dehydrogenase, conserved site (16.7%) Semialdehyde dehydrogenase, NAD-binding (16.7%) Aspartate-semialdehyde dehydrogenase, beta-type (16.7%)" DNEVDKILGLEIGADDYITKPFNPR root "GO:0006355 (19.9%) GO:0000160 (0%) GO:0045892 (0%)" "GO:0005829 (19.9%) GO:0032993 (19.9%) GO:0005737 (0%)" "GO:0000156 (19.9%) GO:0000976 (19.9%) GO:0004519 (0.2%)" "regulation of DNA-templated transcription (19.9%) phosphorelay signal transduction system (0%) negative regulation of DNA-templated transcription (0%)" "cytosol (19.9%) protein-DNA complex (19.9%) cytoplasm (0%)" "phosphorelay response regulator activity (19.9%) transcription cis-regulatory region binding (19.9%) endonuclease activity (0.2%)" "IPR001789 (16.7%) IPR011006 (16.7%) IPR039420 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) CheY-like superfamily (16.7%) Transcriptional regulatory protein WalR-like (16.7%)" TLLASPLVAAAAAITGVIADPR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.2.1.33 (100%) 3-isopropylmalate dehydratase (100%) GO:0009098 (25%) "GO:0003861 (25%) GO:0046872 (25%) GO:0051539 (25%)" L-leucine biosynthetic process (25%) "3-isopropylmalate dehydratase activity (25%) metal ion binding (25%) 4 iron, 4 sulfur cluster binding (25%)" "IPR001030 (14.3%) IPR004430 (14.3%) IPR015931 (14.3%)" "Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (14.3%) 3-isopropylmalate dehydratase, large subunit (14.3%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (14.3%)" GWWEEDYQQTQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.25 (100%) 4-alpha-glucanotransferase (100%) GO:0005975 (25%) GO:0005737 (25%) "GO:0004134 (25%) GO:2001070 (24.7%) GO:0016757 (0.3%)" carbohydrate metabolic process (25%) cytoplasm (25%) "4-alpha-glucanotransferase activity (25%) starch binding (24.7%) glycosyltransferase activity (0.3%)" "IPR003385 (16.8%) IPR017853 (16.8%) IPR002044 (16.6%)" "Glycoside hydrolase, family 77 (16.8%) Glycoside hydrolase superfamily (16.8%) Carbohydrate binding module family 20 (16.6%)" GSVNIDDEGVDGQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006508 (33.3%) GO:0005829 (33.3%) GO:0008237 (33.3%) proteolysis (33.3%) cytosol (33.3%) metallopeptidase activity (33.3%) "IPR002510 (13.2%) IPR025502 (13.2%) IPR035068 (13.2%)" "Metalloprotease TldD/E, N-terminal domain (13.2%) TldD (13.2%) Metalloprotease TldD/PmbA, N-terminal (13.2%)" AAGMSDTQIQQELAKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015159 (100%) polysaccharide transmembrane transporter activity (100%) "IPR003715 (33.3%) IPR019554 (33.3%) IPR049712 (33.3%)" "Polysaccharide export protein, N-terminal domain (33.3%) Soluble ligand binding domain (33.3%) Polysaccharide export protein (33.3%)" HATNSELLCEAFLHAFTGQPLPDDADLRK Bacteria Bacteria "GO:0009086 (20.2%) GO:0045892 (19.6%)" "GO:0005737 (20.1%) GO:0005829 (0.1%)" "GO:0003700 (20.2%) GO:0003677 (19.8%)" "methionine biosynthetic process (20.2%) negative regulation of DNA-templated transcription (19.6%)" "cytoplasm (20.1%) cytosol (0.1%)" "DNA-binding transcription factor activity (20.2%) DNA binding (19.8%)" "IPR002084 (33.3%) IPR010985 (33.3%) IPR023453 (33.3%)" "Methionine repressor MetJ (33.3%) Ribbon-helix-helix (33.3%) Methionine repressor MetJ domain superfamily (33.3%)" IMLDNFNIENTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.2.19 (100%) nicotinate-nucleotide diphosphorylase (carboxylating) (100%) "GO:0009435 (25%) GO:0034213 (25%)" GO:0005737 (25%) GO:0004514 (25%) "NAD+ biosynthetic process (25%) quinolinate catabolic process (25%)" cytoplasm (25%) nicotinate-nucleotide diphosphorylase (carboxylating) activity (25%) "IPR002638 (14.3%) IPR004393 (14.3%) IPR013785 (14.3%)" "Quinolinate phosphoribosyl transferase, C-terminal (14.3%) Nicotinate-nucleotide pyrophosphorylase (14.3%) Aldolase-type TIM barrel (14.3%)" ATDALEGLKGDNEDETTGIEIIKR IHRLEDWGR root 3.1.13.1 (100%) exoribonuclease II (100%) "GO:0006412 (24.9%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (24.8%) GO:0005840 (0.3%) GO:1990904 (0.1%)" "GO:0003735 (24.9%) GO:0070181 (24.8%) GO:0019843 (0.1%)" "translation (24.9%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.8%) ribosome (0.3%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.9%) small ribosomal subunit rRNA binding (24.8%) rRNA binding (0.1%)" "IPR000529 (21.3%) IPR020814 (21.3%) IPR035980 (21.2%)" "Small ribosomal subunit protein bS6 (21.3%) Small ribosomal subunit protein bS6, plastid/chloroplast (21.3%) Small ribosomal subunit protein bS6 superfamily (21.2%)" ALEGDVLGSYQHGAR root GO:0006414 (0.5%) "GO:0005737 (46.5%) GO:0005739 (0.5%) GO:0005829 (0.5%)" "GO:0003746 (50%) GO:0005085 (0.5%) GO:0008270 (0.5%)" translational elongation (0.5%) "cytoplasm (46.5%) mitochondrion (0.5%) cytosol (0.5%)" "translation elongation factor activity (50%) guanyl-nucleotide exchange factor activity (0.5%) zinc ion binding (0.5%)" "IPR001816 (20.1%) IPR014039 (20.1%) IPR018101 (20.1%)" "Translation elongation factor EFTs/EF1B (20.1%) Translation elongation factor EFTs/EF1B, dimerisation (20.1%) Translation elongation factor Ts, conserved site (20.1%)" IMGDSVFSHILSYTSAACDAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.17 (100%) L-serine ammonia-lyase (100%) GO:0019450 (50%) GO:0080146 (50%) L-cysteine catabolic process to pyruvate (50%) L-cysteine desulfhydrase activity (50%) "IPR005130 (50%) IPR021144 (50%)" "Serine dehydratase-like, alpha subunit (50%) Uncharacterised protein family UPF0597 (50%)" QAFIEECWKER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" IQQLANTILNNPAEVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.6.4.13 (66.7%) 3.6.4.- (33.3%)" "RNA helicase (66.7%) Acting on ATP; involved in cellular and subcellular movement (33.3%)" GO:0005829 (20.2%) "GO:0003724 (20.2%) GO:0005524 (20.2%) GO:0003676 (19.6%)" cytosol (20.2%) "RNA helicase activity (20.2%) ATP binding (20.2%) nucleic acid binding (19.6%)" "IPR001650 (14.5%) IPR014001 (14.5%) IPR027417 (14.5%)" "Helicase, C-terminal domain-like (14.5%) Helicase superfamily 1/2, ATP-binding domain (14.5%) P-loop containing nucleoside triphosphate hydrolase (14.5%)" YLLDLSKDYK Paraclostridium sordellii Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Paraclostridium Paraclostridium sordellii 2.1.3.3 (100%) ornithine carbamoyltransferase (100%) "GO:0019240 (20%) GO:0042450 (20%)" GO:0005737 (20%) "GO:0004585 (20%) GO:0016597 (20%)" "citrulline biosynthetic process (20%) L-arginine biosynthetic process via ornithine (20%)" cytoplasm (20%) "ornithine carbamoyltransferase activity (20%) amino acid binding (20%)" "IPR002292 (16.7%) IPR006130 (16.7%) IPR006131 (16.7%)" "Ornithine/putrescine carbamoyltransferase (16.7%) Aspartate/ornithine carbamoyltransferase (16.7%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (16.7%)" KAEKVDMEAAGENAPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (32.9%) "GO:0022627 (32.9%) GO:0005840 (1.2%)" GO:0003735 (32.9%) translation (32.9%) "cytosolic small ribosomal subunit (32.9%) ribosome (1.2%)" structural constituent of ribosome (32.9%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" AMYQNMLVVIDPNQDDQPALRR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006950 (0.2%) GO:0034644 (0.2%) GO:0044010 (0.2%)" GO:0005737 (98.7%) GO:0036094 (0.2%) "response to stress (0.2%) cellular response to UV (0.2%) single-species biofilm formation (0.2%)" cytoplasm (98.7%) small molecule binding (0.2%) IPR006016 (100%) UspA (100%) ALDANIYSAFTDGNHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.1.17 (100%) L-serine ammonia-lyase (100%) GO:0006094 (25%) "GO:0003941 (25%) GO:0046872 (25%) GO:0051539 (25%)" gluconeogenesis (25%) "L-serine ammonia-lyase activity (25%) metal ion binding (25%) 4 iron, 4 sulfur cluster binding (25%)" "IPR005130 (20.8%) IPR004644 (19.8%) IPR005131 (19.8%)" "Serine dehydratase-like, alpha subunit (20.8%) Iron-sulphur-dependent L-serine dehydratase single chain form (19.8%) Serine dehydratase beta chain (19.8%)" ASGSQLVTLAMKR root "2.8.1.10 (99.8%) 4.1.99.19 (0.2%)" "thiazole synthase (99.8%) 2-iminoacetate synthase (0.2%)" "GO:0009229 (31.3%) GO:0009228 (5.4%)" "GO:0005737 (30.4%) GO:0005829 (0.1%) GO:1902508 (0.1%)" "GO:1990107 (26.3%) GO:0016783 (5.2%) GO:0016829 (0.4%)" "thiamine diphosphate biosynthetic process (31.3%) thiamine biosynthetic process (5.4%)" "cytoplasm (30.4%) cytosol (0.1%) 2-iminoacetate synthase complex (0.1%)" "thiazole synthase activity (26.3%) sulfurtransferase activity (5.2%) lyase activity (0.4%)" "IPR033983 (33%) IPR008867 (33%) IPR013785 (32.9%)" "Thiazole synthase ThiG (33%) Thiazole synthase (33%) Aldolase-type TIM barrel (32.9%)" LGFPVFPLEWHDPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) GO:0005829 (16.7%) "GO:0004818 (16.7%) GO:0005524 (16.7%) GO:0000049 (16.6%)" glutamyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%) tRNA binding (16.6%)" "IPR020058 (9.8%) IPR049940 (9.8%) IPR045462 (9.8%)" "Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (9.8%) Glutamyl-Q tRNA(Asp) synthetase/Glutamate--tRNA ligase (9.8%) Aminoacyl-tRNA synthetase, class I, anticodon-binding (9.8%)" VFDADPDMQVLNGR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.6.2.1 (100%) DNA topoisomerase (100%) GO:0006265 (25.3%) "GO:0003677 (25.3%) GO:0003917 (25.3%) GO:0046872 (24.1%)" DNA topological change (25.3%) "DNA binding (25.3%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25.3%) metal ion binding (24.1%)" "IPR000380 (7.3%) IPR003602 (7.3%) IPR013497 (7.3%)" "DNA topoisomerase, type IA (7.3%) DNA topoisomerase, type IA, DNA-binding domain (7.3%) DNA topoisomerase, type IA, central (7.3%)" LISMYATNDCRK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" AVAPTLAICPNCGEWHVYHTVCGACGYYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.3%) "GO:0015934 (32.9%) GO:0022625 (0.5%)" GO:0003735 (33.3%) translation (33.3%) "large ribosomal subunit (32.9%) cytosolic large ribosomal subunit (0.5%)" structural constituent of ribosome (33.3%) "IPR002677 (33.3%) IPR011332 (33.3%) IPR044957 (33.3%)" "Large ribosomal subunit protein bL32 (33.3%) Zinc-binding ribosomal protein (33.3%) Large ribosomal subunit protein bL32, bacteria (33.3%)" LLAEHNLDASAIKGTGVGGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.3.1.61 (96.9%) 2.3.1.- (3.1%)" "dihydrolipoyllysine-residue succinyltransferase (96.9%) Transferring groups other than amino-acyl groups (3.1%)" "GO:0006099 (19.6%) GO:0033512 (18.8%) GO:0006086 (0.1%)" "GO:0005829 (19.6%) GO:0045252 (18.9%) GO:0005737 (0.7%)" "GO:0004149 (20.1%) GO:0016746 (0.7%) GO:0031405 (0.7%)" "tricarboxylic acid cycle (19.6%) L-lysine catabolic process to acetyl-CoA via saccharopine (18.8%) pyruvate decarboxylation to acetyl-CoA (0.1%)" "cytosol (19.6%) oxoglutarate dehydrogenase complex (18.9%) cytoplasm (0.7%)" "dihydrolipoyllysine-residue succinyltransferase activity (20.1%) acyltransferase activity (0.7%) lipoic acid binding (0.7%)" "IPR004167 (11.3%) IPR036625 (11.3%) IPR000089 (11.2%)" "Peripheral subunit-binding domain (11.3%) E3-binding domain superfamily (11.3%) Biotin/lipoyl attachment (11.2%)" AILEYGIGGNEVKVDTSEAIANIPENR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis LKTALAQLEYAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0046677 (25%) "GO:0005886 (25%) GO:0030313 (25%)" "GO:0015562 (23.8%) GO:0022857 (1.2%)" response to antibiotic (25%) "plasma membrane (25%) cell envelope (25%)" "efflux transmembrane transporter activity (23.8%) transmembrane transporter activity (1.2%)" "IPR006143 (25.6%) IPR032317 (25.6%) IPR051160 (25.6%)" "RND efflux pump, membrane fusion protein (25.6%) Unknown (25.6%) Unknown (25.6%)" FFDDPSTITEEEIIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0032790 (20.4%) GO:0006412 (1%)" GO:0005737 (19.4%) "GO:0005525 (20.4%) GO:0003746 (19.4%) GO:0003924 (19.4%)" "ribosome disassembly (20.4%) translation (1%)" cytoplasm (19.4%) "GTP binding (20.4%) translation elongation factor activity (19.4%) GTPase activity (19.4%)" "IPR027417 (6.5%) IPR000640 (6.2%) IPR000795 (6.2%)" "P-loop containing nucleoside triphosphate hydrolase (6.5%) Elongation factor EFG, domain V-like (6.2%) Translational (tr)-type GTP-binding domain (6.2%)" NIPSNVVVAGTPTR Escherichia coli Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli "2.3.1.18 (66.7%) 1.2.4.1 (33.3%)" "galactoside O-acetyltransferase (66.7%) pyruvate dehydrogenase (acetyl-transferring) (33.3%)" "GO:0016747 (72.7%) GO:0008870 (18.2%) GO:0004739 (9.1%)" "acyltransferase activity, transferring groups other than amino-acyl groups (72.7%) galactoside O-acetyltransferase activity (18.2%) pyruvate dehydrogenase (acetyl-transferring) activity (9.1%)" "IPR011004 (20%) IPR018357 (20%) IPR020019 (20%)" "Trimeric LpxA-like superfamily (20%) Hexapeptide transferase, conserved site (20%) Acyltransferase PglD-like (20%)" AIHIKDEKEIGASGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016853 (100%) isomerase activity (100%) "IPR013022 (25.7%) IPR036237 (25.7%) IPR050312 (25.7%)" "Xylose isomerase-like, TIM barrel domain (25.7%) Xylose isomerase-like superfamily (25.7%) IolE/XylA/MocC-like (25.7%)" SKEIVDISGLTHGVGWCAPQQGACK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides MRPEEAQVLIQK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" FHLNEYPLFINGLAITK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.2%) IPR008948 (14.2%) IPR018951 (14.2%)" "Fumarate lyase family (14.2%) L-Aspartase-like (14.2%) Fumarase C, C-terminal (14.2%)" INSNEELALPK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.4.1.21 (100%) S-ribosylhomocysteine lyase (100%) "GO:0009372 (31.9%) GO:0019284 (0.3%) GO:2000145 (0.3%)" GO:0005829 (0.3%) "GO:0005506 (31.9%) GO:0043768 (31.9%) GO:0016787 (2.2%)" "quorum sensing (31.9%) L-methionine salvage from S-adenosylmethionine (0.3%) regulation of cell motility (0.3%)" cytosol (0.3%) "iron ion binding (31.9%) S-ribosylhomocysteine lyase activity (31.9%) hydrolase activity (2.2%)" "IPR003815 (33.3%) IPR011249 (33.3%) IPR037005 (33.3%)" "S-ribosylhomocysteinase (LuxS) (33.3%) Metalloenzyme, LuxS/M16 peptidase-like (33.3%) S-ribosylhomocysteinase (LuxS) superfamily (33.3%)" HIVVIFNPADITGLITLLYSGLKPSQVTTLAALDSTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006108 (33.6%) GO:0006099 (0.8%) GO:0019752 (0.8%)" GO:0005737 (0.8%) "GO:0016615 (29.7%) GO:0016616 (29.7%) GO:0030060 (4.7%)" "malate metabolic process (33.6%) tricarboxylic acid cycle (0.8%) carboxylic acid metabolic process (0.8%)" cytoplasm (0.8%) "malate dehydrogenase activity (29.7%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (29.7%) L-malate dehydrogenase (NAD+) activity (4.7%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" EAQAVLNIPITDAYEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.13 (100%) arabinose-5-phosphate isomerase (100%) GO:1901135 (39.6%) "GO:0097367 (39.6%) GO:0016853 (14.6%) GO:0019146 (6.3%)" carbohydrate derivative metabolic process (39.6%) "carbohydrate derivative binding (39.6%) isomerase activity (14.6%) arabinose-5-phosphate isomerase activity (6.3%)" "IPR001347 (33.3%) IPR035474 (33.3%) IPR046348 (33.3%)" "SIS domain (33.3%) KpsF-like, SIS domain (33.3%) SIS domain superfamily (33.3%)" AVTAAVEELKALSVPCSDSK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.6%) GO:0006457 (0.1%) GO:0009314 (0.1%)" "GO:0005737 (16.2%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0140662 (17.6%) GO:0005524 (17.4%) GO:0016853 (16.8%)" "protein refolding (17.6%) protein folding (0.1%) response to radiation (0.1%)" "cytoplasm (16.2%) cytosol (0.1%) membrane (0.1%)" "ATP-dependent protein folding chaperone (17.6%) ATP binding (17.4%) isomerase activity (16.8%)" "IPR001844 (17.4%) IPR027413 (17.3%) IPR002423 (17.1%)" "Chaperonin Cpn60/GroEL (17.4%) GroEL-like equatorial domain superfamily (17.3%) Chaperonin Cpn60/GroEL/TCP-1 family (17.1%)" AAGANKVAVIK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006412 (24.8%) GO:0002181 (0%) GO:0006351 (0%)" "GO:0022625 (24.7%) GO:0005840 (0.4%) GO:0005829 (0.1%)" "GO:0003735 (24.8%) GO:0003729 (24.7%) GO:0003677 (0%)" "translation (24.8%) cytoplasmic translation (0%) DNA-templated transcription (0%)" "cytosolic large ribosomal subunit (24.7%) ribosome (0.4%) cytosol (0.1%)" "structural constituent of ribosome (24.8%) mRNA binding (24.7%) DNA binding (0%)" "IPR000206 (19.9%) IPR013823 (19.9%) IPR014719 (19.9%)" "Large ribosomal subunit protein bL12 (19.9%) Large ribosomal subunit protein bL12, C-terminal (19.9%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (19.9%)" YSYVDENGETK Bacteria Bacteria "GO:0045892 (0%) GO:0006355 (0%) GO:0006417 (0%)" "GO:0005829 (11%) GO:0032993 (11%) GO:0009295 (11%)" "GO:0000976 (11%) GO:0001217 (11%) GO:0003680 (11%)" "negative regulation of DNA-templated transcription (0%) regulation of DNA-templated transcription (0%) regulation of translation (0%)" "cytosol (11%) protein-DNA complex (11%) nucleoid (11%)" "transcription cis-regulatory region binding (11%) DNA-binding transcription repressor activity (11%) minor groove of adenine-thymine-rich DNA binding (11%)" "IPR037150 (20.1%) IPR027444 (20%) IPR027454 (20%)" "Histone-like protein H-NS, C-terminal domain superfamily (20.1%) DNA-binding protein H-NS-like, C-terminal domain (20%) Histone-like protein H-NS, N-terminal (20%)" EARTASSYNNIPLDRVHFLDLPFYETGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (33.3%) GO:0006044 (33.3%)" GO:0004342 (33.3%) "carbohydrate metabolic process (33.3%) N-acetylglucosamine metabolic process (33.3%)" glucosamine-6-phosphate deaminase activity (33.3%) "IPR003737 (14.3%) IPR004547 (14.3%) IPR006148 (14.3%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.3%) Glucosamine-6-phosphate isomerase (14.3%) Glucosamine/galactosamine-6-phosphate isomerase (14.3%)" MDKYAAEYAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.8%) "GO:0005737 (16.8%) GO:0005840 (16.8%) GO:1990904 (16%)" "GO:0003735 (16.8%) GO:0070181 (16.8%)" translation (16.8%) "cytoplasm (16.8%) ribosome (16.8%) ribonucleoprotein complex (16%)" "structural constituent of ribosome (16.8%) small ribosomal subunit rRNA binding (16.8%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" NLLTSFAGESQAR Bacteria Bacteria "1.11.1.1 (50%) 1.14.13.81 (50%)" "NADH peroxidase (50%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (50%)" "GO:0005506 (49.6%) GO:0016491 (49.6%) GO:0046872 (0.4%)" "iron ion binding (49.6%) oxidoreductase activity (49.6%) metal ion binding (0.4%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" ITSMISTVGFYEHTGDWLYTSGIPAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" AAPFTTSTLQQEAAR root "5.6.2.1 (98.9%) 5.99.1.2 (1.1%)" "DNA topoisomerase (98.9%) Transferred entry: 5.6.2.1 (1.1%)" GO:0006265 (24.7%) "GO:0005694 (1.3%) GO:0016020 (0.1%)" "GO:0003677 (24.7%) GO:0003917 (24.7%) GO:0046872 (23.1%)" DNA topological change (24.7%) "chromosome (1.3%) membrane (0.1%)" "DNA binding (24.7%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (24.7%) metal ion binding (23.1%)" "IPR000380 (7.2%) IPR003602 (7.2%) IPR013497 (7.2%)" "DNA topoisomerase, type IA (7.2%) DNA topoisomerase, type IA, DNA-binding domain (7.2%) DNA topoisomerase, type IA, central (7.2%)" LHRAIGDHLTCIFVDHGMLR RADIALTYIYGIGR Desulfovibrionales Bacteria Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales GO:0006412 (16.7%) "GO:0005829 (16.7%) GO:0015935 (16.7%)" "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "cytosol (16.7%) small ribosomal subunit (16.7%)" "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR001892 (21.1%) IPR010979 (21.1%) IPR019980 (21.1%)" "Small ribosomal subunit protein uS13 (21.1%) Small ribosomal subunit protein uS13-like, H2TH (21.1%) Small ribosomal subunit protein uS13, bacteria (21.1%)" SKPEMLIELFR root "GO:0006353 (16.6%) GO:0031564 (16.6%) GO:0032784 (0%)" "GO:0005829 (16.6%) GO:0008023 (0%)" "GO:0003723 (16.6%) GO:0003700 (16.2%) GO:0000166 (16%)" "DNA-templated transcription termination (16.6%) transcription antitermination (16.6%) regulation of DNA-templated transcription elongation (0%)" "cytosol (16.6%) transcription elongation factor complex (0%)" "RNA binding (16.6%) DNA-binding transcription factor activity (16.2%) nucleotide binding (16%)" "IPR030842 (8.8%) IPR009019 (8.8%) IPR015946 (8.8%)" "Transcription factor NusA, prokaryotes (8.8%) K homology domain superfamily, prokaryotic type (8.8%) K homology domain-like, alpha/beta (8.8%)" TGVVPQKDIDVIMVAPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.86 (100%) ketol-acid reductoisomerase (NADP(+)) (100%) "GO:0009097 (20.3%) GO:0009099 (20.3%)" GO:0070013 (1.6%) "GO:0004455 (20.3%) GO:0046872 (20.3%) GO:0016853 (17.2%)" "isoleucine biosynthetic process (20.3%) L-valine biosynthetic process (20.3%)" intracellular organelle lumen (1.6%) "ketol-acid reductoisomerase activity (20.3%) metal ion binding (20.3%) isomerase activity (17.2%)" "IPR000506 (16.7%) IPR008927 (16.7%) IPR013023 (16.7%)" "Ketol-acid reductoisomerase, C-terminal (16.7%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.7%) Ketol-acid reductoisomerase (16.7%)" NYETPDAVEASQK root 3.1.3.25 (100%) inositol-phosphate phosphatase (100%) "GO:0007165 (11.2%) GO:0006020 (11.2%) GO:0031564 (11.2%)" "GO:0005737 (11.1%) GO:0005829 (0%)" "GO:0008934 (11.3%) GO:0046872 (11.2%) GO:0003723 (11.1%)" "signal transduction (11.2%) inositol metabolic process (11.2%) transcription antitermination (11.2%)" "cytoplasm (11.1%) cytosol (0%)" "inositol monophosphate 1-phosphatase activity (11.3%) metal ion binding (11.2%) RNA binding (11.1%)" "IPR000760 (20.4%) IPR020583 (20.3%) IPR033942 (20.3%)" "Inositol monophosphatase-like (20.4%) Inositol monophosphatase, metal-binding site (20.3%) Inositol monophosphatase (20.3%)" EGFSGFAHWMKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.16.3.2 (97.4%) 1.16.3.1 (2.6%)" "bacterial non-heme ferritin (97.4%) ferroxidase (2.6%)" "GO:0006826 (14.3%) GO:0006879 (14.3%)" "GO:0005829 (14.3%) GO:0005737 (0.4%)" "GO:0004322 (14.3%) GO:0008198 (14.3%) GO:0008199 (14.3%)" "iron ion transport (14.3%) intracellular iron ion homeostasis (14.3%)" "cytosol (14.3%) cytoplasm (0.4%)" "ferroxidase activity (14.3%) ferrous iron binding (14.3%) ferric iron binding (14.3%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" AILSEIRPAEIPLDQLNER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.1.3.23 (100%) sugar-phosphatase (100%) GO:0005829 (25%) "GO:0000287 (25%) GO:0016289 (25%) GO:0016791 (23.1%)" cytosol (25%) "magnesium ion binding (25%) acyl-CoA hydrolase activity (25%) phosphatase activity (23.1%)" "IPR000150 (14.3%) IPR003736 (14.3%) IPR006379 (14.3%)" "Cof family (14.3%) Phenylacetic acid degradation-related domain (14.3%) HAD-superfamily hydrolase, subfamily IIB (14.3%)" MSELQYGKIPELEK root 3.6.1.15 (100%) nucleoside-triphosphate phosphatase (100%) "GO:0034605 (16.9%) GO:0042026 (15.9%) GO:0006508 (0.8%)" "GO:0005829 (14.8%) GO:0005737 (2.1%) GO:0005759 (0%)" "GO:0005524 (16.9%) GO:0016887 (16.9%) GO:0042802 (14.8%)" "cellular response to heat (16.9%) protein refolding (15.9%) proteolysis (0.8%)" "cytosol (14.8%) cytoplasm (2.1%) mitochondrial matrix (0%)" "ATP binding (16.9%) ATP hydrolysis activity (16.9%) identical protein binding (14.8%)" "IPR027417 (8.6%) IPR050130 (8.6%) IPR003959 (8.5%)" "P-loop containing nucleoside triphosphate hydrolase (8.6%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%) ATPase, AAA-type, core (8.5%)" ASVPSGASTGEHEALELRDGDKHR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.5%) "GO:0000015 (16.5%) GO:0005576 (16.5%) GO:0009986 (16.5%)" "GO:0000287 (16.5%) GO:0004634 (16.5%) GO:0016829 (1%)" glycolytic process (16.5%) "phosphopyruvate hydratase complex (16.5%) extracellular region (16.5%) cell surface (16.5%)" "magnesium ion binding (16.5%) phosphopyruvate hydratase activity (16.5%) lyase activity (1%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" NVGKDAMKADGTINR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0009055 (98.5%) GO:0016491 (1.5%)" "electron transfer activity (98.5%) oxidoreductase activity (1.5%)" "IPR012255 (20.7%) IPR014729 (20.7%) IPR014730 (20.7%)" "Electron transfer flavoprotein, beta subunit (20.7%) Rossmann-like alpha/beta/alpha sandwich fold (20.7%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (20.7%)" ARLPATDGQVKFPAWSPYL Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0051301 (33%) GO:0017038 (32.9%) GO:0015031 (0.1%)" "GO:0042597 (33%) GO:0016020 (0.1%) GO:0030288 (0.1%)" "GO:0016787 (0.3%) GO:0019904 (0.1%) GO:0044877 (0.1%)" "cell division (33%) protein import (32.9%) protein transport (0.1%)" "periplasmic space (33%) membrane (0.1%) outer membrane-bounded periplasmic space (0.1%)" "hydrolase activity (0.3%) protein domain specific binding (0.1%) protein-containing complex binding (0.1%)" "IPR011042 (25.4%) IPR011659 (25.2%) IPR014167 (24.8%)" "Six-bladed beta-propeller, TolB-like (25.4%) WD40-like beta-propeller (25.2%) Tol-Pal system protein TolB (24.8%)" QMGHAGAIISGSSGSATEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.2.1.5 (100%) succinate--CoA ligase (ADP-forming) (100%) GO:0006099 (20%) GO:0009361 (20%) "GO:0000166 (20%) GO:0004775 (20%) GO:0004776 (20%)" tricarboxylic acid cycle (20%) succinate-CoA ligase complex (ADP-forming) (20%) "nucleotide binding (20%) succinate-CoA ligase (ADP-forming) activity (20%) succinate-CoA ligase (GDP-forming) activity (20%)" "IPR003781 (14.3%) IPR005810 (14.3%) IPR005811 (14.3%)" "CoA-binding (14.3%) Succinyl-CoA ligase, alpha subunit (14.3%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.3%)" IIEVAINEMTAITGQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (16.8%) "GO:0005840 (16.6%) GO:1990904 (16.6%) GO:0022625 (0.2%)" "GO:0003735 (16.8%) GO:0000049 (16.3%) GO:0019843 (16.3%)" translation (16.8%) "ribosome (16.6%) ribonucleoprotein complex (16.6%) cytosolic large ribosomal subunit (0.2%)" "structural constituent of ribosome (16.8%) tRNA binding (16.3%) rRNA binding (16.3%)" "IPR002132 (20.1%) IPR022803 (20.1%) IPR031309 (20.1%)" "Large ribosomal subunit protein uL5 (20.1%) Large ribosomal subunit protein uL5 domain superfamily (20.1%) Large ribosomal subunit protein uL5, C-terminal (20.1%)" VIAVSSYGATKEEALAQSFAGAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0006189 (20%) GO:0009113 (20%)" "GO:0004637 (20%) GO:0005524 (20%) GO:0046872 (20%)" "'de novo' IMP biosynthetic process (20%) purine nucleobase biosynthetic process (20%)" "phosphoribosylamine-glycine ligase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000115 (11.1%) IPR011054 (11.1%) IPR011761 (11.1%)" "Phosphoribosylglycinamide synthetase (11.1%) Rudiment single hybrid motif (11.1%) ATP-grasp fold (11.1%)" ALGAVDKAATEVCR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (50%) GO:0004356 (50%) glutamine biosynthetic process (50%) glutamine synthetase activity (50%) "IPR008146 (14.4%) IPR008147 (14.4%) IPR014746 (14.4%)" "Glutamine synthetase, catalytic domain (14.4%) Glutamine synthetase, N-terminal domain (14.4%) Glutamine synthetase/guanido kinase, catalytic domain (14.4%)" YNELNDSHLR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae GO:0006457 (16.7%) GO:0005737 (16.7%) "GO:0000774 (16.7%) GO:0042803 (16.7%) GO:0051082 (16.7%)" protein folding (16.7%) cytoplasm (16.7%) "adenyl-nucleotide exchange factor activity (16.7%) protein homodimerization activity (16.7%) unfolded protein binding (16.7%)" "IPR000740 (33.3%) IPR009012 (33.3%) IPR013805 (33.3%)" "GrpE nucleotide exchange factor (33.3%) GrpE nucleotide exchange factor, head (33.3%) GrpE nucleotide exchange factor, coiled-coil (33.3%)" VAINDIGTEEDFIK Actinomycetes Bacteria Bacillati Actinomycetota Actinomycetes GO:0006412 (19.4%) "GO:0005840 (18.9%) GO:1990904 (18.4%) GO:0022627 (0.7%)" "GO:0003729 (19.4%) GO:0003735 (19.4%) GO:0016491 (3.2%)" translation (19.4%) "ribosome (18.9%) ribonucleoprotein complex (18.4%) cytosolic small ribosomal subunit (0.7%)" "mRNA binding (19.4%) structural constituent of ribosome (19.4%) oxidoreductase activity (3.2%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" NMLIVESLTDNKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR041218 (25%) IPR049280 (25%) IPR049281 (25%)" "Domain of unknown function DUF5606 (25%) Domain of unknown function DUF6852 (25%) BVU_3817-like, C-terminal domain superfamily (25%)" GVPDWTGSMINTLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.5%) IPR008969 (12.5%) IPR012910 (12.5%)" "TonB-dependent receptor-like, beta-barrel (12.5%) Carboxypeptidase-like, regulatory domain superfamily (12.5%) TonB-dependent receptor, plug domain (12.5%)" MLEALAECDDAIMEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" KGTQGEGLTFYGPEEATIAYNEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" VSQAIEKTEQFFQSLGLSTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (25%) IPR018211 (25%) IPR044731 (25%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (25%) Alcohol dehydrogenase, iron-type, conserved site (25%) Butanol dehydrogenase-like (25%)" VVSGGTDNHLFLVDLVDKNLTGKEADAALGR root 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (16.3%) GO:0035999 (15.3%) GO:0032259 (7.7%)" "GO:0005829 (16.3%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0004372 (16.3%) GO:0030170 (16.3%) GO:0008168 (7.7%)" "glycine biosynthetic process from serine (16.3%) tetrahydrofolate interconversion (15.3%) methylation (7.7%)" "cytosol (16.3%) cytoplasm (0.1%) membrane (0.1%)" "glycine hydroxymethyltransferase activity (16.3%) pyridoxal phosphate binding (16.3%) methyltransferase activity (7.7%)" "IPR015422 (14.5%) IPR015424 (14.5%) IPR039429 (14.5%)" "Pyridoxal phosphate-dependent transferase, small domain (14.5%) Pyridoxal phosphate-dependent transferase (14.5%) Serine hydroxymethyltransferase-like domain (14.5%)" RGEEDDTSGHYLR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006777 (33.4%) GO:0034214 (0.1%)" GO:0005829 (33.4%) "GO:0005525 (32.8%) GO:0016779 (0.1%) GO:0016829 (0.1%)" "Mo-molybdopterin cofactor biosynthetic process (33.4%) protein hexamerization (0.1%)" cytosol (33.4%) "GTP binding (32.8%) nucleotidyltransferase activity (0.1%) lyase activity (0.1%)" "IPR012245 (20.3%) IPR036425 (20.3%) IPR001453 (20.3%)" "Molybdenum cofactor biosynthesis protein MoaB (20.3%) MoaB/Mog-like domain superfamily (20.3%) MoaB/Mog domain (20.3%)" AGINPAHVDSEEHMESNKAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0005737 (47.1%) GO:0003746 (52.9%) cytoplasm (47.1%) translation elongation factor activity (52.9%) "IPR001816 (20.5%) IPR014039 (20.5%) IPR036402 (20.5%)" "Translation elongation factor EFTs/EF1B (20.5%) Translation elongation factor EFTs/EF1B, dimerisation (20.5%) Elongation factor Ts, dimerisation domain superfamily (20.5%)" ALTNLFTGILTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR032265 (100%) Protein of unknown function DUF4831 (100%) HIDGGVETVEGPLPIVITVNGSAAPCRPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0009055 (96.2%) GO:0016491 (2.3%) GO:0003677 (0.8%)" "electron transfer activity (96.2%) oxidoreductase activity (2.3%) DNA binding (0.8%)" "IPR000049 (20.1%) IPR012255 (20.1%) IPR014729 (20.1%)" "Electron transfer flavoprotein, beta-subunit, conserved site (20.1%) Electron transfer flavoprotein, beta subunit (20.1%) Rossmann-like alpha/beta/alpha sandwich fold (20.1%)" MVDLNCFTIESAMTMVAGTAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (16.7%) IPR006519 (16.7%) IPR020783 (16.7%)" "Ribosomal protein uL11 (16.7%) Large ribosomal subunit protein uL11, bacteria (16.7%) Large ribosomal subunit protein uL11, C-terminal (16.7%)" AWEHIQEIESLGGMAK Bacteria Bacteria 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20.2%) GO:0005737 (20.2%) "GO:0004494 (20.2%) GO:0031419 (20.2%) GO:0046872 (19.3%)" propionate metabolic process, methylmalonyl pathway (20.2%) cytoplasm (20.2%) "methylmalonyl-CoA mutase activity (20.2%) cobalamin binding (20.2%) metal ion binding (19.3%)" "IPR006098 (17%) IPR006099 (17%) IPR016176 (17%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (17%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (17%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (17%)" IAGVNVTSNDGAPGSGAQIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0044718 (8.3%) GO:0009279 (83.3%) GO:0015344 (8.3%) siderophore transmembrane transport (8.3%) cell outer membrane (83.3%) siderophore uptake transmembrane transporter activity (8.3%) "IPR008969 (12.8%) IPR012910 (12.8%) IPR023996 (12.8%)" "Carboxypeptidase-like, regulatory domain superfamily (12.8%) TonB-dependent receptor, plug domain (12.8%) TonB-dependent outer membrane protein, SusC/RagA (12.8%)" GNPFQIGMFTGASTGDKLDGELAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" TDKKGNVMYEMNVQGVAVSAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR025347 (100%) Protein of unknown function DUF4251 (100%) STQNQLDKNLAEVNSLSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (25%) GO:0005737 (25%) "GO:0004828 (25%) GO:0005524 (25%)" seryl-tRNA aminoacylation (25%) cytoplasm (25%) "serine-tRNA ligase activity (25%) ATP binding (25%)" "IPR002314 (14.3%) IPR002317 (14.3%) IPR006195 (14.3%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (14.3%) Serine-tRNA ligase, type1 (14.3%) Aminoacyl-tRNA synthetase, class II (14.3%)" EGFQPTETQPR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 3.1.1.31 (100%) 6-phosphogluconolactonase (100%) "GO:0006006 (25.1%) GO:0009051 (23.4%) GO:0006098 (0.2%)" GO:0005829 (25.2%) "GO:0017057 (25.2%) GO:0016787 (0.9%) GO:0016853 (0.2%)" "glucose metabolic process (25.1%) pentose-phosphate shunt, oxidative branch (23.4%) pentose-phosphate shunt (0.2%)" cytosol (25.2%) "6-phosphogluconolactonase activity (25.2%) hydrolase activity (0.9%) isomerase activity (0.2%)" "IPR019405 (20.3%) IPR050282 (20.3%) IPR015943 (20.2%)" "Lactonase, 7-bladed beta-propeller (20.3%) Cycloisomerase 2 (20.3%) WD40/YVTN repeat-like-containing domain superfamily (20.2%)" EASEGCVLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (48.8%) GO:0003746 (51.2%) cytoplasm (48.8%) translation elongation factor activity (51.2%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" DAKEQSQNFMTLNGPWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.1%) IPR006101 (7.1%) IPR006102 (7.1%)" "Beta galactosidase small chain/ domain 5 (7.1%) Glycoside hydrolase, family 2 (7.1%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.1%)" AYQESIGQGHRDIVLLPASAHGTNPASAIQCGYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" SAIPMGCVLTLPATGSESNAGAVISR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.1.1.- (64.3%) 1.1.1.2 (26.8%) 1.1.1.1 (5.4%)" "With NAD(+) or NADP(+) as acceptor (64.3%) alcohol dehydrogenase (NADP(+)) (26.8%) alcohol dehydrogenase (5.4%)" GO:0000302 (0.2%) GO:0005829 (19.8%) "GO:0008106 (19.8%) GO:1990002 (19.8%) GO:1990362 (19.8%)" response to reactive oxygen species (0.2%) cytosol (19.8%) "alcohol dehydrogenase (NADP+) activity (19.8%) methylglyoxal reductase (NADPH) (acetol producing) activity (19.8%) butanol dehydrogenase (NAD+) activity (19.8%)" "IPR044731 (25.5%) IPR001670 (25.3%) IPR018211 (24.8%)" "Butanol dehydrogenase-like (25.5%) Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (25.3%) Alcohol dehydrogenase, iron-type, conserved site (24.8%)" ATAYINWAPEPWSLR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0044718 (24.9%) GO:0009279 (24.9%) "GO:0015344 (24.9%) GO:0038023 (24.9%) GO:0047091 (0.5%)" siderophore transmembrane transport (24.9%) cell outer membrane (24.9%) "siderophore uptake transmembrane transporter activity (24.9%) signaling receptor activity (24.9%) L-lysine 6-monooxygenase (NADPH) activity (0.5%)" "IPR000531 (14.5%) IPR010105 (14.5%) IPR036942 (14.5%)" "TonB-dependent receptor-like, beta-barrel (14.5%) TonB-dependent siderophore receptor (14.5%) TonB-dependent receptor-like, beta-barrel domain superfamily (14.5%)" VVEEIHKDFGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) GO:0006633 (33.3%) "GO:0004316 (33.3%) GO:0051287 (33.3%)" fatty acid biosynthetic process (33.3%) "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33.3%) NAD binding (33.3%)" "IPR002347 (16.7%) IPR011284 (16.7%) IPR020904 (16.7%)" "Short-chain dehydrogenase/reductase SDR (16.7%) 3-oxoacyl-(acyl-carrier-protein) reductase (16.7%) Short-chain dehydrogenase/reductase, conserved site (16.7%)" EGKELAALNPHIVVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.2.1.2 (95%) 4.1.2.- (5%)" "transaldolase (95%) Aldehyde-lyases (5%)" "GO:0005975 (17%) GO:0006098 (17%) GO:0042182 (15.2%)" GO:0005737 (17%) "GO:0004801 (17%) GO:0016832 (17%)" "carbohydrate metabolic process (17%) pentose-phosphate shunt (17%) ketone catabolic process (15.2%)" cytoplasm (17%) "transaldolase activity (17%) aldehyde-lyase activity (17%)" "IPR001585 (16.7%) IPR004731 (16.7%) IPR013785 (16.7%)" "Transaldolase/Fructose-6-phosphate aldolase (16.7%) Transaldolase type 3B/Fructose-6-phosphate aldolase (16.7%) Aldolase-type TIM barrel (16.7%)" FVNILMVDGKK root "GO:0006412 (19.9%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0015935 (19.5%) GO:0005840 (0.6%) GO:1990904 (0.3%)" "GO:0003735 (19.9%) GO:0019843 (19.6%) GO:0000049 (19.4%)" "translation (19.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "small ribosomal subunit (19.5%) ribosome (0.6%) ribonucleoprotein complex (0.3%)" "structural constituent of ribosome (19.9%) rRNA binding (19.6%) tRNA binding (19.4%)" "IPR023798 (20.2%) IPR036823 (20.2%) IPR000235 (19.9%)" "Small ribosomal subunit protein uS7 domain (20.2%) Small ribosomal subunit protein uS7 domain superfamily (20.2%) Small ribosomal subunit protein uS7 (19.9%)" NPQTGKEITIAAAK root 3.4.21.- (100%) Serine endopeptidases (100%) "GO:0030261 (11.2%) GO:0006270 (11%) GO:0006351 (11%)" "GO:0005829 (11.2%) GO:1990103 (11%) GO:1990178 (11%)" "GO:0003677 (11.3%) GO:0030527 (11.2%) GO:0042802 (11%)" "chromosome condensation (11.2%) DNA replication initiation (11%) DNA-templated transcription (11%)" "cytosol (11.2%) DnaA-HU complex (11%) HU-DNA complex (11%)" "DNA binding (11.3%) structural constituent of chromatin (11.2%) identical protein binding (11%)" "IPR000119 (33.2%) IPR010992 (33%) IPR020816 (32.9%)" "Histone-like DNA-binding protein (33.2%) Integration host factor (IHF)-like DNA-binding domain superfamily (33%) Histone-like DNA-binding protein, conserved site (32.9%)" TLIPLDKEAIFNSVKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (25.9%) GO:0003863 (7.4%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (25.9%) branched-chain 2-oxo acid dehydrogenase activity (7.4%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" LASLSPSATLAMSQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "2.6.1.- (96.6%) 2.6.1.1 (3.4%)" "Transaminases (96.6%) aspartate transaminase (3.4%)" GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" QKVQLTPEIDVDAILAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "5.4.2.10 (72.7%) 5.4.2.2 (18.2%) 5.4.2.8 (9.1%)" "phosphoglucosamine mutase (72.7%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (18.2%) phosphomannomutase (9.1%)" "GO:0005975 (14%) GO:0006048 (14%) GO:0009252 (14%)" GO:0005829 (14%) "GO:0000287 (14%) GO:0004615 (14%) GO:0008966 (14%)" "carbohydrate metabolic process (14%) UDP-N-acetylglucosamine biosynthetic process (14%) peptidoglycan biosynthetic process (14%)" cytosol (14%) "magnesium ion binding (14%) phosphomannomutase activity (14%) phosphoglucosamine mutase activity (14%)" "IPR005841 (10.1%) IPR005844 (10.1%) IPR005845 (10.1%)" "Alpha-D-phosphohexomutase superfamily (10.1%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10.1%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (10.1%)" QIKDVLGANPCPIQIPIGAEETFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" STHYYDELPTTGNEYGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" FGSGWAWLVLKGDK root 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0019430 (0.1%) GO:0006801 (0.1%) GO:0006979 (0.1%)" "GO:0005737 (33%) GO:0005829 (0.1%)" "GO:0004784 (33%) GO:0030145 (31.9%) GO:0046872 (0.9%)" "removal of superoxide radicals (0.1%) superoxide metabolic process (0.1%) response to oxidative stress (0.1%)" "cytoplasm (33%) cytosol (0.1%)" "superoxide dismutase activity (33%) manganese ion binding (31.9%) metal ion binding (0.9%)" "IPR001189 (16.8%) IPR019832 (16.8%) IPR036314 (16.8%)" "Manganese/iron superoxide dismutase (16.8%) Manganese/iron superoxide dismutase, C-terminal (16.8%) Manganese/iron superoxide dismutase, C-terminal domain superfamily (16.8%)" GASAEELRELLGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.13.12.- (33.3%) 1.13.12.16 (33.3%) 5.3.1.16 (33.3%)" "With incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) (33.3%) nitronate monooxygenase (33.3%) 1-(5-phosphoribosyl)-5[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamidisomerase (33.3%)" "GO:0018580 (77.4%) GO:0051213 (16.1%) GO:0004497 (3.2%)" "nitronate monooxygenase activity (77.4%) dioxygenase activity (16.1%) monooxygenase activity (3.2%)" "IPR004136 (50%) IPR013785 (50%)" "Nitronate monooxygenase (50%) Aldolase-type TIM barrel (50%)" IGIIQQITADLAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis LMTEFNYNSVMQVPR root "GO:0006412 (16.4%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (17.1%) GO:1990904 (16.3%) GO:0005829 (0.1%)" "GO:0000049 (16.6%) GO:0019843 (16.6%) GO:0003735 (16.4%)" "translation (16.4%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (17.1%) ribonucleoprotein complex (16.3%) cytosol (0.1%)" "tRNA binding (16.6%) rRNA binding (16.6%) structural constituent of ribosome (16.4%)" "IPR022803 (16.9%) IPR031310 (16.7%) IPR002132 (16.5%)" "Large ribosomal subunit protein uL5 domain superfamily (16.9%) Large ribosomal subunit protein uL5, N-terminal (16.7%) Large ribosomal subunit protein uL5 (16.5%)" LSSGVSTAVFSAILAMEHK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0019450 (50%) GO:0080146 (50%) L-cysteine catabolic process to pyruvate (50%) L-cysteine desulfhydrase activity (50%) "IPR005130 (50%) IPR021144 (50%)" "Serine dehydratase-like, alpha subunit (50%) Uncharacterised protein family UPF0597 (50%)" VLMPSEGYEGVVK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 4.2.1.32 (100%) L(+)-tartrate dehydratase (100%) "GO:0006099 (0.1%) GO:0044010 (0.1%) GO:1901275 (0.1%)" "GO:0005829 (0.1%) GO:1902494 (0.1%)" "GO:0046872 (32.9%) GO:0051539 (32.9%) GO:0016829 (22.3%)" "tricarboxylic acid cycle (0.1%) single-species biofilm formation (0.1%) tartrate metabolic process (0.1%)" "cytosol (0.1%) catalytic complex (0.1%)" "metal ion binding (32.9%) 4 iron, 4 sulfur cluster binding (32.9%) lyase activity (22.3%)" "IPR004646 (50%) IPR051208 (50%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (50%) Class-I Fumarase/Tartrate Dehydratase (50%)" MNKSEFISAVAEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" NMNVPGEDQYR root "1.8.1.- (97.7%) 1.6.4.- (2.3%)" "With NAD(+) or NADP(+) as acceptor (97.7%) With a disulfide as acceptor (2.3%)" "GO:0000302 (14.1%) GO:0045454 (0%) GO:0006979 (0%)" "GO:0005829 (14.3%) GO:0032991 (14.2%) GO:0009321 (0%)" "GO:0016668 (14.5%) GO:0050660 (14.4%) GO:0051287 (14.1%)" "response to reactive oxygen species (14.1%) cell redox homeostasis (0%) response to oxidative stress (0%)" "cytosol (14.3%) protein-containing complex (14.2%) alkyl hydroperoxide reductase complex (0%)" "oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (14.5%) flavin adenine dinucleotide binding (14.4%) NAD binding (14.1%)" "IPR036188 (11.4%) IPR050097 (11.4%) IPR023753 (11.4%)" "FAD/NAD(P)-binding domain superfamily (11.4%) Ferredoxin--NADP reductase type 2 (11.4%) FAD/NAD(P)-binding domain (11.4%)" NIGPAGLTIVIVREDLLGK root 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.9%) GO:0008615 (19.8%) GO:0006563 (0%)" "GO:0005737 (19.9%) GO:0005829 (0%)" "GO:0004648 (19.9%) GO:0030170 (19.9%) GO:0008483 (0.3%)" "L-serine biosynthetic process (19.9%) pyridoxine biosynthetic process (19.8%) L-serine metabolic process (0%)" "cytoplasm (19.9%) cytosol (0%)" "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.9%) pyridoxal phosphate binding (19.9%) transaminase activity (0.3%)" "IPR000192 (16.7%) IPR022278 (16.7%) IPR015421 (16.7%)" "Aminotransferase class V domain (16.7%) Phosphoserine aminotransferase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" MKEHLSNTIAEIKEAGLYKEER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (13.7%) GO:0030148 (13.7%)" "GO:0005829 (14%) GO:0016020 (13.7%)" "GO:0008890 (14%) GO:0030170 (14%) GO:0004758 (8.4%)" "L-threonine catabolic process to glycine (13.7%) sphingolipid biosynthetic process (13.7%)" "cytosol (14%) membrane (13.7%)" "glycine C-acetyltransferase activity (14%) pyridoxal phosphate binding (14%) serine C-palmitoyltransferase activity (8.4%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" TKEPGANGEPLYLDVKDCFYGTENAPVIVGGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.1 (62.5%) 1.2.7.- (25%) 1.2.1.51 (12.5%)" "pyruvate synthase (62.5%) With an iron-sulfur protein as acceptor (25%) pyruvate dehydrogenase (NADP(+)) (12.5%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (11.9%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (11.9%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" GILGANHVYYINGGAYYFDQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" DVCEKYSPDSAVKDKANEIINYLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.4%) GO:0006044 (32.4%)" "GO:0004342 (32.4%) GO:0016853 (2.9%)" "carbohydrate metabolic process (32.4%) N-acetylglucosamine metabolic process (32.4%)" "glucosamine-6-phosphate deaminase activity (32.4%) isomerase activity (2.9%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" EAIDYLMSKGEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (60%) 1.2.1.51 (20%) 1.2.7.- (20%)" "pyruvate synthase (60%) pyruvate dehydrogenase (NADP(+)) (20%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (11.6%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (11.6%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" NPSNPAVVSEIDGEITMGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.1%) GO:0000428 (17.1%) "GO:0003677 (17.1%) GO:0003899 (17.1%) GO:0000287 (14.9%)" DNA-templated transcription (17.1%) DNA-directed RNA polymerase complex (17.1%) "DNA binding (17.1%) DNA-directed RNA polymerase activity (17.1%) magnesium ion binding (14.9%)" "IPR007081 (9.3%) IPR045867 (9.3%) IPR000722 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.3%) DNA-directed RNA polymerase, subunit beta-prime (9.3%) RNA polymerase, alpha subunit (9.1%)" SAVGIGTLLCDGIGDTIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "1.17.7.3 (85.7%) 1.17.7.1 (14.3%)" "(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (85.7%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) (14.3%)" "GO:0016114 (17.5%) GO:0019288 (17.5%)" "GO:0005506 (17.5%) GO:0046429 (17.5%) GO:0051539 (17.5%)" "terpenoid biosynthetic process (17.5%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.5%)" "iron ion binding (17.5%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.5%) 4 iron, 4 sulfur cluster binding (17.5%)" "IPR004588 (25%) IPR011005 (25%) IPR045854 (25%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25%) Dihydropteroate synthase-like superfamily (25%) Nitrite and sulphite reductase 4Fe-4S domain-like superfamily (25%)" ALQAGTKKPTEIPDEDRDFYLER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (12%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (12%)" "IPR003953 (14.7%) IPR027477 (14.7%) IPR030664 (14.7%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.7%) Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily (14.7%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (14.7%)" IENNDKLPIEYIEPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" ATAAVTEAPAAEAASEEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.3%) IPR036373 (33.3%) IPR047859 (33.3%)" "Large ribosomal subunit protein bL17 (33.3%) Large ribosomal subunit protein bL17 superfamily (33.3%) Large ribosomal subunit protein bL17, conserved site (33.3%)" FHDGETITIEPWR Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.3.99.1 (50%) 1.3.5.1 (30%) 1.3.5.4 (20%)" "Deleted entry (50%) succinate dehydrogenase (30%) Transferred entry: 1.3.5.1 (20%)" "GO:0022904 (23.6%) GO:0009060 (22.8%) GO:0006099 (0.8%)" "GO:0009055 (22.8%) GO:0051537 (22.8%) GO:0016491 (5.7%)" "respiratory electron transport chain (23.6%) aerobic respiration (22.8%) tricarboxylic acid cycle (0.8%)" "electron transfer activity (22.8%) 2 iron, 2 sulfur cluster binding (22.8%) oxidoreductase activity (5.7%)" "IPR009051 (14%) IPR012675 (14%) IPR017896 (14%)" "Alpha-helical ferredoxin (14%) Beta-grasp domain superfamily (14%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14%)" HLQTYVNNLNSLVPGTEYEGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.15.1.1 (100%) superoxide dismutase (100%) GO:0005737 (32.9%) "GO:0004784 (33.6%) GO:0046872 (33.6%)" cytoplasm (32.9%) "superoxide dismutase activity (33.6%) metal ion binding (33.6%)" "IPR019831 (16.8%) IPR019832 (16.8%) IPR019833 (16.8%)" "Manganese/iron superoxide dismutase, N-terminal (16.8%) Manganese/iron superoxide dismutase, C-terminal (16.8%) Manganese/iron superoxide dismutase, binding site (16.8%)" AIANIENLMR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" ADVEGLPSPEEQAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0016787 (50%) GO:0046872 (50%)" "hydrolase activity (50%) metal ion binding (50%)" "IPR001279 (33.3%) IPR036866 (33.3%) IPR051453 (33.3%)" "Metallo-beta-lactamase (33.3%) Ribonuclease Z/Hydroxyacylglutathione hydrolase-like (33.3%) Metallo-Beta-Lactamase Glyoxalase II (33.3%)" VSLSEEPEAEIPVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.17.7.3 (86.4%) 1.17.7.1 (13.6%)" "(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (86.4%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) (13.6%)" "GO:0016114 (17.9%) GO:0019288 (17.9%)" "GO:0046429 (17.9%) GO:0051539 (17.9%) GO:0005506 (17.2%)" "terpenoid biosynthetic process (17.9%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.9%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.9%) 4 iron, 4 sulfur cluster binding (17.9%) iron ion binding (17.2%)" "IPR004588 (25.3%) IPR011005 (25.3%) IPR045854 (24.9%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25.3%) Dihydropteroate synthase-like superfamily (25.3%) Nitrite and sulphite reductase 4Fe-4S domain-like superfamily (24.9%)" MKPANAADLDNLLDAEGYKAVVNA Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0019464 (25.9%) GO:0009249 (22.2%)" "GO:0005829 (25.9%) GO:0005960 (25.9%)" "glycine decarboxylation via glycine cleavage system (25.9%) protein lipoylation (22.2%)" "cytosol (25.9%) glycine cleavage complex (25.9%)" "IPR000089 (16.7%) IPR002930 (16.7%) IPR003016 (16.7%)" "Biotin/lipoyl attachment (16.7%) Glycine cleavage system H-protein (16.7%) 2-oxo acid dehydrogenase, lipoyl-binding site (16.7%)" IVINMGIGDARENPK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0006412 (17%) "GO:0005840 (17%) GO:1990904 (17%)" "GO:0003735 (17%) GO:0000049 (16%) GO:0019843 (16%)" translation (17%) "ribosome (17%) ribonucleoprotein complex (17%)" "structural constituent of ribosome (17%) tRNA binding (16%) rRNA binding (16%)" "IPR002132 (16.7%) IPR020929 (16.7%) IPR020930 (16.7%)" "Large ribosomal subunit protein uL5 (16.7%) Large ribosomal subunit protein uL5, conserved site (16.7%) Large ribosomal subunit protein uL5, bacteria (16.7%)" YTKDHEWIR root "GO:0019464 (25%) GO:0009249 (24.8%)" "GO:0005960 (25%) GO:0005829 (24.5%) GO:0005737 (0.5%)" "glycine decarboxylation via glycine cleavage system (25%) protein lipoylation (24.8%)" "glycine cleavage complex (25%) cytosol (24.5%) cytoplasm (0.5%)" "IPR000089 (17.2%) IPR002930 (17.2%) IPR011053 (17.2%)" "Biotin/lipoyl attachment (17.2%) Glycine cleavage system H-protein (17.2%) Single hybrid motif (17.2%)" TTPSIVAFVDGGER Pseudomonadati Bacteria Pseudomonadati "GO:0005737 (4.5%) GO:0070013 (0.6%)" "GO:0005524 (31.8%) GO:0140662 (31.8%) GO:0051082 (31.3%)" "cytoplasm (4.5%) intracellular organelle lumen (0.6%)" "ATP binding (31.8%) ATP-dependent protein folding chaperone (31.8%) unfolded protein binding (31.3%)" "IPR013126 (16.8%) IPR018181 (16.8%) IPR043129 (16.8%)" "Heat shock protein 70 family (16.8%) Heat shock protein 70, conserved site (16.8%) ATPase, nucleotide binding domain (16.8%)" VFLNPAAIIAAVNNAGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR032573 (100%) Protein of unknown function DUF4925 (100%) AGVVELPSGLQYEVLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" QLKADPWENIEERFPVGSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" SEGICHPIILGNEER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (17.2%) "GO:0016746 (17.2%) GO:0046872 (17.2%) GO:0051287 (17.2%)" malate metabolic process (17.2%) "acyltransferase activity (17.2%) metal ion binding (17.2%) NAD binding (17.2%)" "IPR002505 (9.1%) IPR012188 (9.1%) IPR012301 (9.1%)" "Phosphate acetyl/butaryl transferase (9.1%) NAD(P)-dependent malic enzyme (9.1%) Malic enzyme, N-terminal domain (9.1%)" HLLNTHLHLDHIFGNPFMLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.-.-.- (50%) 3.1.2.6 (50%)" "Hydrolases (50%) hydroxyacylglutathione hydrolase (50%)" "GO:0016787 (50%) GO:0046872 (50%)" "hydrolase activity (50%) metal ion binding (50%)" "IPR001279 (33.3%) IPR036866 (33.3%) IPR051453 (33.3%)" "Metallo-beta-lactamase (33.3%) Ribonuclease Z/Hydroxyacylglutathione hydrolase-like (33.3%) Metallo-Beta-Lactamase Glyoxalase II (33.3%)" IKGFSGEDATPALEGADVVLISAGVAR Bacteria Bacteria 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006099 (25%) GO:0006108 (24.5%) GO:0006096 (0%)" "GO:0005737 (25%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0030060 (25%) GO:0016491 (0.1%) GO:0016615 (0%)" "tricarboxylic acid cycle (25%) malate metabolic process (24.5%) glycolytic process (0%)" "cytoplasm (25%) cytosol (0%) membrane (0%)" "L-malate dehydrogenase (NAD+) activity (25%) oxidoreductase activity (0.1%) malate dehydrogenase activity (0%)" "IPR001236 (13.5%) IPR036291 (13.5%) IPR001252 (13.2%)" "Lactate/malate dehydrogenase, N-terminal (13.5%) NAD(P)-binding domain superfamily (13.5%) Malate dehydrogenase, active site (13.2%)" NSGEYDGKPYGGFYTQEEAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) "GO:0005975 (25%) GO:0030203 (25%)" GO:0016020 (25%) GO:0004563 (25%) "carbohydrate metabolic process (25%) glycosaminoglycan metabolic process (25%)" membrane (25%) beta-N-acetylhexosaminidase activity (25%) "IPR000421 (14%) IPR008979 (14%) IPR015882 (14%)" "Coagulation factor 5/8, C-terminal domain (14%) Galactose-binding-like domain superfamily (14%) Beta-hexosaminidase, bacterial type, N-terminal (14%)" WSMIDNNTWGMILGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.3.1 (100%) methylmalonyl-CoA carboxytransferase (100%) GO:0006094 (6.9%) GO:0005737 (6.9%) "GO:0003824 (72.4%) GO:0004736 (6.9%) GO:0047154 (6.9%)" gluconeogenesis (6.9%) cytoplasm (6.9%) "catalytic activity (72.4%) pyruvate carboxylase activity (6.9%) methylmalonyl-CoA carboxytransferase activity (6.9%)" "IPR000891 (24.8%) IPR003379 (24.8%) IPR013785 (24.8%)" "Pyruvate carboxyltransferase (24.8%) Carboxylase, conserved domain (24.8%) Aldolase-type TIM barrel (24.8%)" LLAAGIGDALATWFEAR root "1.1.1.6 (98.9%) 1.1.1.75 (1%) 1.-.-.- (0.1%)" "glycerol dehydrogenase (98.9%) (R)-aminopropanol dehydrogenase (1%) Oxidoreductases (0.1%)" "GO:0006091 (19.2%) GO:0019563 (19.2%) GO:0019588 (0.1%)" "GO:0005829 (20.1%) GO:0032991 (0%)" "GO:0046872 (20.1%) GO:0008888 (19.8%) GO:0019147 (0.8%)" "generation of precursor metabolites and energy (19.2%) glycerol catabolic process (19.2%) anaerobic glycerol catabolic process (0.1%)" "cytosol (20.1%) protein-containing complex (0%)" "metal ion binding (20.1%) glycerol dehydrogenase (NAD+) activity (19.8%) (R)-aminopropanol dehydrogenase activity (0.8%)" "IPR016205 (33.7%) IPR018211 (33.7%) IPR001670 (32.7%)" "Glycerol dehydrogenase (33.7%) Alcohol dehydrogenase, iron-type, conserved site (33.7%) Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (32.7%)" TVGEAIVEATKNGAFSLVGGGDSVACVNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" NALTTLPMGGGKGGSDFAPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (25.3%) GO:0005829 (24.7%) "GO:0004354 (25.3%) GO:0000166 (24.7%)" glutamate biosynthetic process (25.3%) cytosol (24.7%) "glutamate dehydrogenase (NADP+) activity (25.3%) nucleotide binding (24.7%)" "IPR006095 (12.5%) IPR006096 (12.5%) IPR006097 (12.5%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.5%)" GFGFVEMPNDEEGNAAIAALNEKEIDGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0003723 (100%) RNA binding (100%) "IPR000504 (20%) IPR012677 (20%) IPR035979 (20%)" "RNA recognition motif domain (20%) Nucleotide-binding alpha-beta plait domain superfamily (20%) RNA-binding domain superfamily (20%)" AIANATHLPIVLYNVPGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.3.3.7 (100%) 4-hydroxy-tetrahydrodipicolinate synthase (100%) "GO:0009089 (20.6%) GO:0019877 (20.6%)" "GO:0005829 (20.6%) GO:0016020 (17.6%)" GO:0008840 (20.6%) "lysine biosynthetic process via diaminopimelate (20.6%) diaminopimelate biosynthetic process (20.6%)" "cytosol (20.6%) membrane (17.6%)" 4-hydroxy-tetrahydrodipicolinate synthase activity (20.6%) "IPR002220 (25%) IPR005263 (25%) IPR013785 (25%)" "DapA-like (25%) 4-hydroxy-tetrahydrodipicolinate synthase, DapA (25%) Aldolase-type TIM barrel (25%)" QAVLVPEASIGTDQLGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0046677 (25%) "GO:0005886 (25%) GO:0030313 (25%)" "GO:0015562 (23.7%) GO:0022857 (1.3%)" response to antibiotic (25%) "plasma membrane (25%) cell envelope (25%)" "efflux transmembrane transporter activity (23.7%) transmembrane transporter activity (1.3%)" "IPR006143 (25.6%) IPR032317 (25.6%) IPR051160 (25.6%)" "RND efflux pump, membrane fusion protein (25.6%) Unknown (25.6%) Unknown (25.6%)" ALDNVTPQIEVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.4%) GO:0015935 (20.4%) "GO:0003735 (20.4%) GO:0019843 (20.4%) GO:0000049 (18.4%)" translation (20.4%) small ribosomal subunit (20.4%) "structural constituent of ribosome (20.4%) rRNA binding (20.4%) tRNA binding (18.4%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" RVVEPLITLAK root "GO:0006412 (33.1%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (33.1%) GO:0005840 (0.4%) GO:0005737 (0%)" GO:0003735 (33.2%) "translation (33.1%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (33.1%) ribosome (0.4%) cytoplasm (0%)" structural constituent of ribosome (33.2%) "IPR000456 (33.2%) IPR036373 (33.2%) IPR047859 (33.1%)" "Large ribosomal subunit protein bL17 (33.2%) Large ribosomal subunit protein bL17 superfamily (33.2%) Large ribosomal subunit protein bL17, conserved site (33.1%)" SIPYEDFKDNEYLENMVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 7.1.1.- (100%) Hydron translocation or charge separation linked to oxidoreductase reactions (100%) "GO:0009060 (11.1%) GO:0015990 (11.1%)" "GO:0005886 (11.1%) GO:0045271 (11.1%)" "GO:0005506 (11.1%) GO:0008137 (11.1%) GO:0048038 (11.1%)" "aerobic respiration (11.1%) electron transport coupled proton transport (11.1%)" "plasma membrane (11.1%) respiratory chain complex I (11.1%)" "iron ion binding (11.1%) NADH dehydrogenase (ubiquinone) activity (11.1%) quinone binding (11.1%)" "IPR006137 (50%) IPR006138 (50%)" "NADH:ubiquinone oxidoreductase-like, 20kDa subunit (50%) NADH-ubiquinone oxidoreductase, 20 Kd subunit (50%)" TEHMFFEGEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0016301 (25.4%) GO:0050242 (25.4%) GO:0046872 (24.8%)" "kinase activity (25.4%) pyruvate, phosphate dikinase activity (25.4%) metal ion binding (24.8%)" "IPR000121 (10.2%) IPR010121 (10.2%) IPR015813 (10.2%)" "PEP-utilising enzyme, C-terminal (10.2%) Pyruvate, phosphate dikinase (10.2%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (10.2%)" QGNDIGSQYR root "1.8.4.11 (96.2%) 1.8.4.12 (3.8%)" "peptide-methionine (S)-S-oxide reductase (96.2%) peptide-methionine (R)-S-oxide reductase (3.8%)" "GO:0034599 (21.5%) GO:0006979 (1.2%) GO:0030091 (1.2%)" "GO:0005737 (22.5%) GO:0016020 (0.1%)" "GO:0008113 (27.1%) GO:0036456 (21.5%) GO:0033744 (3.2%)" "cellular response to oxidative stress (21.5%) response to oxidative stress (1.2%) protein repair (1.2%)" "cytoplasm (22.5%) membrane (0.1%)" "peptide-methionine (S)-S-oxide reductase activity (27.1%) obsolete L-methionine-(S)-S-oxide reductase activity (21.5%) L-methionine (S)-S-oxide reductase activity (3.2%)" "IPR002569 (34.1%) IPR036509 (34%) IPR050162 (26.9%)" "Peptide methionine sulphoxide reductase MsrA domain (34.1%) Peptide methionine sulphoxide reductase MsrA superfamily (34%) Methionine Sulfoxide Reductase A (26.9%)" NHEALVSPAVDQYWK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.1.1.4 (100%) leucine--tRNA ligase (100%) GO:0006429 (20%) GO:0005829 (20%) "GO:0002161 (20%) GO:0004823 (20%) GO:0005524 (20%)" leucyl-tRNA aminoacylation (20%) cytosol (20%) "aminoacyl-tRNA deacylase activity (20%) leucine-tRNA ligase activity (20%) ATP binding (20%)" "IPR001412 (12.5%) IPR002302 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Leucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" GQISELGAVDVMTGIYTGR TEMWYVVGADEGAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (16.7%) IPR014628 (16.7%) IPR014710 (16.7%)" "RmlC-like cupin domain superfamily (16.7%) Mannose-6-phosphate isomerase, Firmicutes type, short form (16.7%) RmlC-like jelly roll fold (16.7%)" GHGGYIGTDGVPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.3.36 (100%) 1,4-dihydroxy-2-naphthoyl-CoA synthase (100%) GO:0009234 (33.3%) GO:0005829 (33.3%) GO:0008935 (33.3%) menaquinone biosynthetic process (33.3%) cytosol (33.3%) 1,4-dihydroxy-2-naphthoyl-CoA synthase activity (33.3%) "IPR001753 (20%) IPR010198 (20%) IPR014748 (20%)" "Enoyl-CoA hydratase/isomerase (20%) 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB (20%) Enoyl-CoA hydratase, C-terminal (20%)" FRQSLGGLIEAYEAVAR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) "GO:0006189 (20.2%) GO:0009236 (18.4%) GO:0006164 (0.5%)" "GO:0005829 (18.7%) GO:0016020 (0.2%)" "GO:0005524 (20.7%) GO:0004639 (20.5%) GO:0016874 (0.8%)" "'de novo' IMP biosynthetic process (20.2%) cobalamin biosynthetic process (18.4%) purine nucleotide biosynthetic process (0.5%)" "cytosol (18.7%) membrane (0.2%)" "ATP binding (20.7%) phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (20.5%) ligase activity (0.8%)" "IPR028923 (21.5%) IPR018236 (20.5%) IPR050089 (19.5%)" "SAICAR synthetase/ADE2, N-terminal (21.5%) SAICAR synthetase, conserved site (20.5%) SAICAR synthetase (19.5%)" YLPFYTPDDHYYDDEVNLEDVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR024214 (100%) Protein of unknown function DUF3843 (100%) GANTIVLSLQQLLADFQIHYANLR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0008199 (43.3%) GO:0016722 (43.3%) GO:0003677 (13.3%)" "ferric iron binding (43.3%) oxidoreductase activity, acting on metal ions (43.3%) DNA binding (13.3%)" "IPR002177 (20%) IPR008331 (20%) IPR009078 (20%)" "DNA-binding protein Dps (20%) Ferritin/DPS domain (20%) Ferritin-like superfamily (20%)" SFNPEVIDQALR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.290 (100%) 4-phosphoerythronate dehydrogenase (100%) GO:0008615 (22.4%) "GO:0005737 (17.1%) GO:0005829 (5.3%)" "GO:0033711 (22.4%) GO:0051287 (22.4%) GO:0016618 (5.3%)" pyridoxine biosynthetic process (22.4%) "cytoplasm (17.1%) cytosol (5.3%)" "4-phosphoerythronate dehydrogenase activity (22.4%) NAD binding (22.4%) hydroxypyruvate reductase [NAD(P)H] activity (5.3%)" "IPR006139 (19.1%) IPR006140 (19.1%) IPR020921 (19.1%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (19.1%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (19.1%) Erythronate-4-phosphate dehydrogenase (19.1%)" NALTTLPMGGGKGGSDFSPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.4.1.4 (85.7%) 1.4.1.2 (14.3%)" "glutamate dehydrogenase (NADP(+)) (85.7%) glutamate dehydrogenase (14.3%)" GO:0006537 (25.5%) GO:0005829 (25.5%) "GO:0004354 (25.5%) GO:0000166 (23%) GO:0004352 (0.3%)" glutamate biosynthetic process (25.5%) cytosol (25.5%) "glutamate dehydrogenase (NADP+) activity (25.5%) nucleotide binding (23%) glutamate dehydrogenase (NAD+) activity (0.3%)" "IPR006097 (11.3%) IPR033524 (11.3%) IPR046346 (11.3%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.3%) Leu/Phe/Val dehydrogenases active site (11.3%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.3%)" ESVINLMNIAEGKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0016715 (88%) GO:0016798 (12%)" "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen (88%) hydrolase activity, acting on glycosyl bonds (12%)" "IPR008977 (20%) IPR014784 (20%) IPR015196 (20%)" "PHM/PNGase F domain superfamily (20%) Copper type II, ascorbate-dependent monooxygenase-like, C-terminal (20%) Peptide-N-glycosidase F, N-terminal (20%)" SGYPSYHSTILPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR011990 (41.7%) IPR041662 (33.3%) IPR024302 (25%)" "Tetratricopeptide-like helical domain superfamily (41.7%) SusD-like 2 (33.3%) SusD-like (25%)" IETMTIPKEFIGAVIGPGGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.3%) GO:0006396 (14.1%) GO:0006401 (0.2%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "mRNA catabolic process (14.3%) RNA processing (14.1%) RNA catabolic process (0.2%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR003029 (7.9%) IPR004087 (7.9%) IPR004088 (7.9%)" "S1 domain (7.9%) K Homology domain (7.9%) K Homology domain, type 1 (7.9%)" GAYFANPCMVQIHPTCVPVKGDFQSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (13.3%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (13.3%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" LGAQLLGNLYVYAGSEHKHEAQTPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0006412 (20%) GO:0017148 (20%)" GO:0022625 (20%) "GO:0003729 (20%) GO:0003735 (20%)" "translation (20%) negative regulation of translation (20%)" cytosolic large ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%)" "IPR005822 (25%) IPR005823 (25%) IPR023563 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13, conserved site (25%)" DGGEGQCITFYSNKDLQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.6.2.4 (90.9%) 3.6.4.12 (9.1%)" "DNA 3'-5' helicase (90.9%) DNA helicase (9.1%)" "GO:0006260 (8.4%) GO:0006281 (8.4%) GO:0006310 (8.4%)" "GO:0005737 (8.4%) GO:0030894 (8.4%) GO:0043590 (8.4%)" "GO:0009378 (8.4%) GO:0043138 (8.4%) GO:0003677 (8.1%)" "DNA replication (8.4%) DNA repair (8.4%) DNA recombination (8.4%)" "cytoplasm (8.4%) replisome (8.4%) bacterial nucleoid (8.4%)" "four-way junction helicase activity (8.4%) 3'-5' DNA helicase activity (8.4%) DNA binding (8.1%)" "IPR001650 (7.3%) IPR018982 (7.3%) IPR027417 (7.3%)" "Helicase, C-terminal domain-like (7.3%) RQC domain (7.3%) P-loop containing nucleoside triphosphate hydrolase (7.3%)" VVVAEQNLGQFAGYLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.-.- (66.7%) 1.2.7.3 (33.3%)" "Acting on the aldehyde or oxo group of donors (66.7%) 2-oxoglutarate synthase (33.3%)" GO:0006979 (50%) "GO:0016903 (49.2%) GO:0047553 (0.8%)" response to oxidative stress (50%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors (49.2%) 2-oxoglutarate synthase activity (0.8%)" "IPR002869 (13.2%) IPR002880 (13.2%) IPR009014 (13.2%)" "Pyruvate-flavodoxin oxidoreductase, central domain (13.2%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (13.2%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (13.2%)" SEFKFDNFLEVMDYFKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) GO:0042777 (23.7%) "GO:0005524 (23.7%) GO:0046933 (23.7%) GO:0046961 (23.7%)" proton motive force-driven plasma membrane ATP synthesis (23.7%) "ATP binding (23.7%) proton-transporting ATP synthase activity, rotational mechanism (23.7%) proton-transporting ATPase activity, rotational mechanism (23.7%)" "IPR000194 (14.3%) IPR004100 (14.3%) IPR020003 (14.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (14.3%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (14.3%)" VSGGLHGVGVSCVNALSTYLK Pseudomonadati Bacteria Pseudomonadati 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (15.5%) GO:0006261 (9.5%)" "GO:0005737 (9.7%) GO:0005694 (9.5%)" "GO:0003677 (15.5%) GO:0005524 (15.5%) GO:0003918 (9.7%)" "DNA topological change (15.5%) DNA-templated DNA replication (9.5%)" "cytoplasm (9.7%) chromosome (9.5%)" "DNA binding (15.5%) ATP binding (15.5%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity (9.7%)" "IPR036890 (10.4%) IPR001241 (6.9%) IPR000565 (6.8%)" "Histidine kinase/HSP90-like ATPase superfamily (10.4%) DNA topoisomerase, type IIA (6.9%) DNA topoisomerase, type IIA, subunit B (6.8%)" AGLGMMDGVLENVPSAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.4.2.9 (100%) uracil phosphoribosyltransferase (100%) "GO:0006223 (17.2%) GO:0044206 (16.8%) GO:0006206 (0.1%)" "GO:0005737 (14%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0004845 (17.5%) GO:0005525 (17.4%) GO:0000287 (16.1%)" "uracil salvage (17.2%) UMP salvage (16.8%) pyrimidine nucleobase metabolic process (0.1%)" "cytoplasm (14%) cytosol (0.1%) membrane (0.1%)" "uracil phosphoribosyltransferase activity (17.5%) GTP binding (17.4%) magnesium ion binding (16.1%)" "IPR000836 (20.5%) IPR029057 (20.3%) IPR050054 (20.3%)" "Phosphoribosyltransferase domain (20.5%) Phosphoribosyltransferase-like (20.3%) Uracil phosphoribosyltransferase/Adenine phosphoribosyltransferase (20.3%)" TANSDVVVITSGIPR Bacteria Bacteria "1.1.1.37 (99.7%) 1.1.1.27 (0.3%)" "malate dehydrogenase (99.7%) L-lactate dehydrogenase (0.3%)" "GO:0006089 (25.1%) GO:0006099 (24.7%) GO:0019752 (0.1%)" GO:0005737 (0.1%) "GO:0004459 (25.1%) GO:0030060 (24.8%) GO:0016491 (0.2%)" "lactate metabolic process (25.1%) tricarboxylic acid cycle (24.7%) carboxylic acid metabolic process (0.1%)" cytoplasm (0.1%) "L-lactate dehydrogenase (NAD+) activity (25.1%) L-malate dehydrogenase (NAD+) activity (24.8%) oxidoreductase activity (0.2%)" "IPR001236 (16.8%) IPR011275 (16.8%) IPR022383 (16.8%)" "Lactate/malate dehydrogenase, N-terminal (16.8%) Malate dehydrogenase, type 3 (16.8%) Lactate/malate dehydrogenase, C-terminal (16.8%)" DKWPLAYELLLNCGGANK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016787 (100%) hydrolase activity (100%) IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) LAQEASQEAAR root "3.6.1.- (99.7%) 3.6.3.41 (0.3%)" "In phosphorus-containing anhydrides (99.7%) Transferred entry: 7.6.2.5 (0.3%)" "GO:0045900 (13.1%) GO:0006412 (12.1%)" GO:0005737 (12.1%) "GO:0005524 (13.2%) GO:0016887 (12.9%) GO:0000049 (12.6%)" "negative regulation of translational elongation (13.1%) translation (12.1%)" cytoplasm (12.1%) "ATP binding (13.2%) ATP hydrolysis activity (12.9%) tRNA binding (12.6%)" "IPR022374 (17%) IPR027417 (17%) IPR032781 (16.9%)" "Energy-dependent translational throttle protein EttA (17%) P-loop containing nucleoside triphosphate hydrolase (17%) ABC-transporter extension domain (16.9%)" VENGVLSISIPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" NAHNAVTNIGDDLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.11.1.- (100%) Peroxidases (100%) GO:0005829 (33%) "GO:0004601 (33.9%) GO:0020037 (33%)" cytosol (33%) "peroxidase activity (33.9%) heme binding (33%)" "IPR006314 (25%) IPR011008 (25%) IPR048327 (25%)" "Dyp-type peroxidase (25%) Dimeric alpha-beta barrel (25%) Dyp-type peroxidase, N-terminal domain (25%)" SVANAIIAACDEVLNNGK root 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006531 (20.4%) GO:0006099 (19.1%) GO:0006533 (0%)" "GO:0005829 (20.4%) GO:0016020 (0%)" "GO:0008797 (20.4%) GO:0042802 (19.1%) GO:0016829 (0.3%)" "aspartate metabolic process (20.4%) tricarboxylic acid cycle (19.1%) L-aspartate catabolic process (0%)" "cytosol (20.4%) membrane (0%)" "aspartate ammonia-lyase activity (20.4%) identical protein binding (19.1%) lyase activity (0.3%)" "IPR008948 (12.8%) IPR022761 (12.8%) IPR024083 (12.8%)" "L-Aspartase-like (12.8%) Fumarate lyase, N-terminal (12.8%) Fumarase/histidase, N-terminal (12.8%)" CTNFGMEKK Bacteria Bacteria "6.-.-.- (85.7%) 2.1.3.1 (14.3%)" "Ligases (85.7%) methylmalonyl-CoA carboxytransferase (14.3%)" "GO:0015977 (21.9%) GO:0006633 (1.1%)" GO:0009317 (21.9%) "GO:0004658 (23.7%) GO:0003989 (21.9%) GO:0016740 (9.1%)" "carbon fixation (21.9%) fatty acid biosynthetic process (1.1%)" acetyl-CoA carboxylase complex (21.9%) "propionyl-CoA carboxylase activity (23.7%) acetyl-CoA carboxylase activity (21.9%) transferase activity (9.1%)" "IPR011762 (20%) IPR034733 (20%) IPR051047 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20%) Acyl-CoA Carboxylase Beta Subunit (20%)" LIDHLDTMAER root 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0006879 (14%) GO:0030261 (14%) GO:0006950 (0.1%)" "GO:0005737 (14%) GO:0009295 (13.5%) GO:0016020 (0.1%)" "GO:0008199 (14.7%) GO:0016722 (14.7%) GO:0003677 (14%)" "intracellular iron ion homeostasis (14%) chromosome condensation (14%) response to stress (0.1%)" "cytoplasm (14%) nucleoid (13.5%) membrane (0.1%)" "ferric iron binding (14.7%) oxidoreductase activity, acting on metal ions (14.7%) DNA binding (14%)" "IPR002177 (16.8%) IPR008331 (16.8%) IPR009078 (16.8%)" "DNA-binding protein Dps (16.8%) Ferritin/DPS domain (16.8%) Ferritin-like superfamily (16.8%)" VFDEWVEKDLVNLIHQYR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) "GO:0004553 (44.4%) GO:0004565 (5.6%)" carbohydrate metabolic process (50%) "hydrolase activity, hydrolyzing O-glycosyl compounds (44.4%) beta-galactosidase activity (5.6%)" "IPR006101 (7.7%) IPR006102 (7.7%) IPR006103 (7.7%)" "Glycoside hydrolase, family 2 (7.7%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.7%) Glycoside hydrolase family 2, catalytic domain (7.7%)" TYNGSIGMDDQKNPLQTVAEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (51.6%) GO:0046872 (48.4%)" "alkaline phosphatase activity (51.6%) metal ion binding (48.4%)" "IPR001952 (33.3%) IPR017850 (33.3%) IPR018299 (33.3%)" "Alkaline phosphatase (33.3%) Alkaline-phosphatase-like, core domain superfamily (33.3%) Alkaline phosphatase, active site (33.3%)" RFAEAHQLGDIHIHDLDYYPTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.17.4.2 (98.3%) 1.1.98.6 (1.7%)" "ribonucleoside-triphosphate reductase (thioredoxin) (98.3%) ribonucleoside-triphosphate reductase (formate) (1.7%)" "GO:0006260 (16.4%) GO:0009265 (16.4%) GO:0032259 (0.2%)" GO:0031250 (16.4%) "GO:0004748 (16.4%) GO:0005524 (16.4%) GO:0008998 (16.4%)" "DNA replication (16.4%) 2'-deoxyribonucleotide biosynthetic process (16.4%) methylation (0.2%)" anaerobic ribonucleoside-triphosphate reductase complex (16.4%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.4%) ATP binding (16.4%) ribonucleoside-triphosphate reductase (thioredoxin) activity (16.4%)" "IPR005144 (50%) IPR012833 (50%)" "ATP-cone domain (50%) Ribonucleoside-triphosphate reductase, anaerobic (50%)" VVCEVVSPIVKGDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (15.6%) GO:0003723 (1.1%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (15.6%) RNA binding (1.1%)" "IPR001787 (33.3%) IPR028909 (33.3%) IPR036164 (33.3%)" "Large ribosomal subunit protein bL21 (33.3%) Large ribosomal subunit protein bL21-like (33.3%) Large ribosomal subunit protein bL21-like superfamily (33.3%)" HFKEVIDAFR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.6%) GO:0006531 (24.6%)" GO:0005829 (24.6%) "GO:0008797 (24.6%) GO:0016853 (1.6%)" "tricarboxylic acid cycle (24.6%) aspartate metabolic process (24.6%)" cytosol (24.6%) "aspartate ammonia-lyase activity (24.6%) isomerase activity (1.6%)" "IPR000362 (12.6%) IPR008948 (12.6%) IPR018951 (12.6%)" "Fumarate lyase family (12.6%) L-Aspartase-like (12.6%) Fumarase C, C-terminal (12.6%)" GVIMDGDKPEHLLEAVPVMGCYCDVIGVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.1.3.11 (100%) N-succinylornithine carbamoyltransferase (100%) "GO:0019240 (25%) GO:0042450 (25%)" "GO:0004585 (25%) GO:0016597 (25%)" "citrulline biosynthetic process (25%) L-arginine biosynthetic process via ornithine (25%)" "ornithine carbamoyltransferase activity (25%) amino acid binding (25%)" "IPR006130 (20%) IPR006131 (20%) IPR006132 (20%)" "Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20%)" VSGIRPAFEKLDCLDLEGMDKLFTK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR005886 (33.3%) IPR036291 (33.3%) IPR001509 (26.7%)" "UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD-dependent epimerase/dehydratase (26.7%)" VVAEGNTPCPVTADGQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25.1%) GO:0009341 (25.1%) "GO:0004565 (25.1%) GO:0030246 (24.6%)" lactose catabolic process (25.1%) beta-galactosidase complex (25.1%) "beta-galactosidase activity (25.1%) carbohydrate binding (24.6%)" "IPR006101 (7.2%) IPR006102 (7.2%) IPR006103 (7.2%)" "Glycoside hydrolase, family 2 (7.2%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.2%) Glycoside hydrolase family 2, catalytic domain (7.2%)" KGMFSIMNYMNPLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.1%) GO:0005829 (17.1%) "GO:0004612 (17.1%) GO:0005524 (17.1%) GO:0046872 (16.8%)" gluconeogenesis (17.1%) cytosol (17.1%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.1%) ATP binding (17.1%) metal ion binding (16.8%)" "IPR001272 (25.2%) IPR008210 (25.2%) IPR013035 (24.8%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.2%) Phosphoenolpyruvate carboxykinase, N-terminal (25.2%) Phosphoenolpyruvate carboxykinase, C-terminal (24.8%)" VADFIEIGTLMAHDALDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (15%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (15%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" GEYEVVLNTDATR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) GO:0005737 (20%) "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (20%)" glycogen biosynthetic process (20%) cytoplasm (20%) "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (20%)" "IPR004193 (12.5%) IPR006047 (12.5%) IPR006048 (12.5%)" "Glycoside hydrolase, family 13, N-terminal (12.5%) Glycosyl hydrolase family 13, catalytic domain (12.5%) Alpha-amylase/branching enzyme, C-terminal all beta (12.5%)" SSGGDGYAPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" AIQDSPIESVEIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" MQVILLDKVANLGSLGDQVNVK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.9%) GO:0002181 (0%) GO:0032259 (0%)" "GO:0005840 (20.2%) GO:1990904 (19.9%) GO:0022625 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.9%) GO:0008168 (0%)" "translation (19.9%) cytoplasmic translation (0%) methylation (0%)" "ribosome (20.2%) ribonucleoprotein complex (19.9%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%) methyltransferase activity (0%)" "IPR009027 (14.4%) IPR020070 (14.4%) IPR036935 (14.4%)" "Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.4%) Large ribosomal subunit protein bL9, N-terminal (14.4%) Large ribosomal subunit protein bL9, N-terminal domain superfamily (14.4%)" GSLGGGFSSGGFSGGSFSR Mammalia Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia "GO:0045109 (15%) GO:0030855 (9.9%) GO:0008544 (9.3%)" "GO:0045095 (14.6%) GO:0005829 (5.8%) GO:0001533 (5.2%)" "GO:0030280 (14.6%) GO:0046982 (5.4%) GO:0005198 (1.1%)" "intermediate filament organization (15%) epithelial cell differentiation (9.9%) epidermis development (9.3%)" "keratin filament (14.6%) cytosol (5.8%) cornified envelope (5.2%)" "structural constituent of skin epidermis (14.6%) protein heterodimerization activity (5.4%) structural molecule activity (1.1%)" "IPR002957 (34.3%) IPR039008 (34.3%) IPR018039 (31.4%)" "Keratin, type I (34.3%) Intermediate filament, rod domain (34.3%) Intermediate filament protein, conserved site (31.4%)" VTLPDEVIELQGKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.16.1.1 (100%) mercury(II) reductase (100%) "GO:0003955 (46.5%) GO:0050660 (46.5%) GO:0016152 (4.7%)" "NAD(P)H dehydrogenase (quinone) activity (46.5%) flavin adenine dinucleotide binding (46.5%) mercury (II) reductase (NADP+) activity (4.7%)" "IPR001100 (20%) IPR004099 (20%) IPR016156 (20%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (20%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (20%) FAD/NAD-linked reductase, dimerisation domain superfamily (20%)" AYSMANYPAEGDRIMLTVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "7.2.1.1 (98.6%) 1.6.5.- (1.4%)" "NADH:ubiquinone reductase (Na(+)-transporting) (98.6%) With a quinone or similar compound as acceptor (1.4%)" GO:0006814 (16.7%) "GO:0005886 (16.5%) GO:0016020 (0.2%)" "GO:0016655 (16.7%) GO:0051537 (16.7%) GO:0046872 (16.5%)" sodium ion transport (16.7%) "plasma membrane (16.5%) membrane (0.2%)" "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (16.7%) 2 iron, 2 sulfur cluster binding (16.7%) metal ion binding (16.5%)" "IPR008333 (10.2%) IPR010205 (10.2%) IPR017927 (10.2%)" "Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain (10.2%) Na(+)-translocating NADH-quinone reductase subunit F (10.2%) FAD-binding domain, ferredoxin reductase-type (10.2%)" AEAEQTLAALTEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0005829 (100%) cytosol (100%) "IPR005272 (50%) IPR035571 (50%)" "Protein of unknown function DUF406 (50%) UPF0234-like, C-terminal (50%)" NAIMDVIESSIEEILANQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IGLDVLNTIYDTSTAIADQHAEDFEGFKLELFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (1.4%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (1.4%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" QHVPVFVTDEMVGHK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0000028 (16.1%) GO:0006412 (16.1%) GO:0002181 (0.1%)" "GO:0005737 (16%) GO:0015935 (14.3%) GO:0005840 (2.7%)" "GO:0003735 (16.2%) GO:0019843 (14.5%) GO:0003723 (1.7%)" "ribosomal small subunit assembly (16.1%) translation (16.1%) cytoplasmic translation (0.1%)" "cytoplasm (16%) small ribosomal subunit (14.3%) ribosome (2.7%)" "structural constituent of ribosome (16.2%) rRNA binding (14.5%) RNA binding (1.7%)" "IPR002222 (25.7%) IPR020934 (25.7%) IPR023575 (25.7%)" "Small ribosomal subunit protein uS19 (25.7%) Small ribosomal subunit protein uS19, conserved site (25.7%) Small ribosomal subunit protein uS19, superfamily (25.7%)" YYVLDMFPYPSGAGLHVGHPLGYIASDIYSR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.4 (100%) leucine--tRNA ligase (100%) GO:0006429 (20%) "GO:0005829 (20%) GO:0005739 (0.2%)" "GO:0004823 (20%) GO:0005524 (20%) GO:0002161 (19.8%)" leucyl-tRNA aminoacylation (20%) "cytosol (20%) mitochondrion (0.2%)" "leucine-tRNA ligase activity (20%) ATP binding (20%) aminoacyl-tRNA deacylase activity (19.8%)" "IPR001412 (12.2%) IPR002302 (12.2%) IPR014729 (12.2%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.2%) Leucine-tRNA ligase (12.2%) Rossmann-like alpha/beta/alpha sandwich fold (12.2%)" NASFFFLIRPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005524 (100%) ATP binding (100%) "IPR012547 (50%) IPR018631 (50%)" "PD-(D/E)XK nuclease superfamily 9 (50%) AAA-ATPase-like domain (50%)" AAVEEGVVAGGGVALIR root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (16.5%) GO:1990220 (0.1%) GO:0005739 (0%)" "GO:0005524 (17%) GO:0140662 (17%) GO:0016853 (16.8%)" "protein refolding (17%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (16.5%) GroEL-GroES complex (0.1%) mitochondrion (0%)" "ATP binding (17%) ATP-dependent protein folding chaperone (17%) isomerase activity (16.8%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" QVIDASHAEGK root "2.7.3.9 (99.9%) 2.7.-.- (0.1%)" "phosphoenolpyruvate--protein phosphotransferase (99.9%) Transferring phosphorus-containing groups (0.1%)" "GO:0009401 (19.9%) GO:0015764 (0.1%)" "GO:0005737 (19.8%) GO:0005829 (0%)" "GO:0008965 (20.1%) GO:0016301 (19.9%) GO:0046872 (19.9%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (19.9%) N-acetylglucosamine transport (0.1%)" "cytoplasm (19.8%) cytosol (0%)" "phosphoenolpyruvate-protein phosphotransferase activity (20.1%) kinase activity (19.9%) metal ion binding (19.9%)" "IPR000121 (8.5%) IPR015813 (8.5%) IPR040442 (8.5%)" "PEP-utilising enzyme, C-terminal (8.5%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (8.5%) Pyruvate kinase-like domain superfamily (8.5%)" HGKAFIGLLNR Clostridia Bacteria Bacillati Bacillota Clostridia 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (48.4%) GO:0016491 (28.6%) GO:0004601 (13.2%)" "iron ion binding (48.4%) oxidoreductase activity (28.6%) peroxidase activity (13.2%)" "IPR009040 (12.8%) IPR009078 (12.8%) IPR012347 (12.8%)" "Ferritin-like diiron domain (12.8%) Ferritin-like superfamily (12.8%) Ferritin-like (12.8%)" VSLGKDTITISDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (8.9%) "GO:0005524 (21.9%) GO:0016887 (21.9%) GO:0051082 (21.9%)" cytoplasm (8.9%) "ATP binding (21.9%) ATP hydrolysis activity (21.9%) unfolded protein binding (21.9%)" "IPR001404 (18.6%) IPR019805 (18.6%) IPR020575 (18.6%)" "Heat shock protein Hsp90 family (18.6%) Heat shock protein Hsp90, conserved site (18.6%) Heat shock protein Hsp90, N-terminal (18.6%)" VSSKIEIIENLLNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (32.9%) IPR015824 (32.9%) IPR036043 (32.9%)" "Phosphoglycerate kinase (32.9%) Phosphoglycerate kinase, N-terminal (32.9%) Phosphoglycerate kinase superfamily (32.9%)" VAISELNNIIADKVSITSLLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.5%) GO:0015966 (12.5%)" "GO:0005737 (12.5%) GO:0070062 (12.5%) GO:1990742 (12.5%)" "GO:0004081 (12.5%) GO:0004820 (12.5%) GO:0005524 (12.5%)" "glycyl-tRNA aminoacylation (12.5%) diadenosine tetraphosphate biosynthetic process (12.5%)" "cytoplasm (12.5%) extracellular exosome (12.5%) microvesicle (12.5%)" "bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.5%) glycine-tRNA ligase activity (12.5%) ATP binding (12.5%)" "IPR002314 (11.1%) IPR002315 (11.1%) IPR004154 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Glycyl-tRNA synthetase (11.1%) Anticodon-binding (11.1%)" ASVQGEDGRNQILTMGCYGIGVTR root 6.1.1.15 (100%) proline--tRNA ligase (100%) "GO:0006433 (20%) GO:0106074 (0%)" GO:0005829 (20%) "GO:0004827 (20%) GO:0005524 (20%) GO:0002161 (19.8%)" "prolyl-tRNA aminoacylation (20%) aminoacyl-tRNA metabolism involved in translational fidelity (0%)" cytosol (20%) "proline-tRNA ligase activity (20%) ATP binding (20%) aminoacyl-tRNA deacylase activity (19.8%)" "IPR002314 (7.8%) IPR045864 (7.8%) IPR050062 (7.8%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.8%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (7.8%) Proline-tRNA synthetase (7.8%)" NTVAEVYTQVITDLTNAINSGYLAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" YVIAVGGCAISGGPFKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "7.1.1.- (95.8%) 1.6.5.11 (4.2%)" "Hydron translocation or charge separation linked to oxidoreductase reactions (95.8%) Transferred entry: 1.6.5.9 (4.2%)" "GO:0009060 (11.1%) GO:0015990 (11.1%)" "GO:0005886 (11.1%) GO:0045271 (11.1%)" "GO:0005506 (11.1%) GO:0008137 (11.1%) GO:0048038 (11.1%)" "aerobic respiration (11.1%) electron transport coupled proton transport (11.1%)" "plasma membrane (11.1%) respiratory chain complex I (11.1%)" "iron ion binding (11.1%) NADH dehydrogenase (ubiquinone) activity (11.1%) quinone binding (11.1%)" "IPR006137 (50%) IPR006138 (50%)" "NADH:ubiquinone oxidoreductase-like, 20kDa subunit (50%) NADH-ubiquinone oxidoreductase, 20 Kd subunit (50%)" EGINLDNYLEELKENGEESNPEHLCEEIVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.7.2.4 (57.1%) 1.1.1.3 (42.9%)" "aspartate kinase (57.1%) homoserine dehydrogenase (42.9%)" "GO:0009086 (11.1%) GO:0009088 (11.1%) GO:0009089 (11.1%)" "GO:0004072 (11.1%) GO:0004412 (11.1%) GO:0005524 (11.1%)" "methionine biosynthetic process (11.1%) threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%)" "aspartate kinase activity (11.1%) homoserine dehydrogenase activity (11.1%) ATP binding (11.1%)" "IPR001048 (7.1%) IPR001341 (7.1%) IPR001342 (7.1%)" "Aspartate/glutamate/uridylate kinase (7.1%) Aspartate kinase (7.1%) Homoserine dehydrogenase, catalytic (7.1%)" VGAYPGQTYNFTITLTSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0019867 (50%) GO:2001070 (50%) outer membrane (50%) starch binding (50%) "IPR025970 (50.9%) IPR032187 (49.1%)" "SusE outer membrane protein (50.9%) Outer membrane protein SusF/SusE-like, C-terminal (49.1%)" ILPVIITYYADKSFDFVIK Pseudomonadati Bacteria Pseudomonadati GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.3%)" "GO:0003735 (24.9%) GO:0070180 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.3%)" "structural constituent of ribosome (24.9%) large ribosomal subunit rRNA binding (24.9%)" "IPR000911 (14.9%) IPR020783 (14.9%) IPR020784 (14.9%)" "Ribosomal protein uL11 (14.9%) Large ribosomal subunit protein uL11, C-terminal (14.9%) Large ribosomal subunit protein uL11, N-terminal (14.9%)" TANIALINYADGEKR Bacteria Bacteria GO:0002181 (20%) GO:0015934 (20%) "GO:0003735 (20%) GO:0016740 (20%) GO:0019843 (19.2%)" cytoplasmic translation (20%) large ribosomal subunit (20%) "structural constituent of ribosome (20%) transferase activity (20%) rRNA binding (19.2%)" "IPR002171 (11.1%) IPR005880 (11.1%) IPR008991 (11.1%)" "Large ribosomal subunit protein uL2 (11.1%) Large ribosomal subunit protein uL2, bacteria/organella (11.1%) Translation protein SH3-like domain superfamily (11.1%)" IMLANLEEQEAAMTEMFSGTLNKDEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR032265 (100%) Protein of unknown function DUF4831 (100%) SKAYEAIVKGDPMPQPGIPESLNVLLHELR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (17.8%) GO:0006508 (5.5%)" GO:0000428 (17.8%) "GO:0003677 (17.8%) GO:0003899 (17.8%) GO:0032549 (17.8%)" "DNA-templated transcription (17.8%) proteolysis (5.5%)" DNA-directed RNA polymerase complex (17.8%) "DNA binding (17.8%) DNA-directed RNA polymerase activity (17.8%) ribonucleoside binding (17.8%)" "IPR007120 (7.7%) IPR007641 (7.7%) IPR015712 (7.7%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.7%) RNA polymerase Rpb2, domain 7 (7.7%) DNA-directed RNA polymerase, subunit 2 (7.7%)" TKGGMIVDVFGIEAFLPGSQIDVKPIRDYDVFVGK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.5%) "GO:0022627 (23.4%) GO:0005840 (1.3%) GO:1990904 (1.1%)" "GO:0003729 (24.5%) GO:0003735 (24.5%) GO:0004654 (0.1%)" translation (24.5%) "cytosolic small ribosomal subunit (23.4%) ribosome (1.3%) ribonucleoprotein complex (1.1%)" "mRNA binding (24.5%) structural constituent of ribosome (24.5%) polyribonucleotide nucleotidyltransferase activity (0.1%)" "IPR003029 (24.8%) IPR012340 (24.8%) IPR035104 (24.8%)" "S1 domain (24.8%) Nucleic acid-binding, OB-fold (24.8%) Ribosomal protein S1-like (24.8%)" IHELPDPDKMENFASFIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.13.1 (100%) exoribonuclease II (100%) GO:0006402 (25%) GO:0005829 (25%) "GO:0003723 (25%) GO:0008859 (25%)" mRNA catabolic process (25%) cytosol (25%) "RNA binding (25%) exoribonuclease II activity (25%)" "IPR001900 (11.1%) IPR003029 (11.1%) IPR004476 (11.1%)" "Ribonuclease II/R (11.1%) S1 domain (11.1%) Ribonuclease II/ribonuclease R (11.1%)" LKEIIHQQMGGLR root 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (20.3%) GO:0006177 (19.7%) GO:0006164 (0%)" "GO:0016020 (0%) GO:0005737 (0%) GO:0005829 (0%)" "GO:0003938 (20.4%) GO:0046872 (20%) GO:0000166 (19%)" "GTP biosynthetic process (20.3%) GMP biosynthetic process (19.7%) purine nucleotide biosynthetic process (0%)" "membrane (0%) cytoplasm (0%) cytosol (0%)" "IMP dehydrogenase activity (20.4%) metal ion binding (20%) nucleotide binding (19%)" "IPR001093 (17.1%) IPR013785 (17.1%) IPR005990 (17.1%)" "IMP dehydrogenase/GMP reductase (17.1%) Aldolase-type TIM barrel (17.1%) Inosine-5'-monophosphate dehydrogenase (17.1%)" HDYDFLMNASYVKW Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR006311 (20%) IPR013022 (20%) IPR019546 (20%)" "Twin-arginine translocation pathway, signal sequence (20%) Xylose isomerase-like, TIM barrel domain (20%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (20%)" AFAPGKVPFPLMHIDSK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.4 (100%) sulfate adenylyltransferase (100%) "GO:0000103 (24.9%) GO:0070814 (24%)" "GO:0005524 (25.3%) GO:0004781 (24.9%) GO:0003824 (0.4%)" "sulfate assimilation (24.9%) hydrogen sulfide biosynthetic process (24%)" "ATP binding (25.3%) sulfate adenylyltransferase (ATP) activity (24.9%) catalytic activity (0.4%)" "IPR002500 (25.1%) IPR014729 (25.1%) IPR050128 (25.1%)" "Phosphoadenosine phosphosulphate reductase domain (25.1%) Rossmann-like alpha/beta/alpha sandwich fold (25.1%) Sulfate adenylyltransferase subunit 2 (25.1%)" STLSDFASGYLYFGLHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) GO:0005737 (20%) "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (20%)" glycogen biosynthetic process (20%) cytoplasm (20%) "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (20%)" "IPR004193 (12.5%) IPR006047 (12.5%) IPR006048 (12.5%)" "Glycoside hydrolase, family 13, N-terminal (12.5%) Glycosyl hydrolase family 13, catalytic domain (12.5%) Alpha-amylase/branching enzyme, C-terminal all beta (12.5%)" EAFAVSSGYDSAIFNYFDGREGSHFR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" YSKDLADEGTR root GO:0016032 (50%) GO:0016020 (50%) viral process (50%) membrane (50%) IPR019276 (100%) Protein of unkown function DUF2303 (100%) LGGLEKDYETSAISTDPANHQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.3 (66.7%) 1.2.7.11 (33.3%)" "2-oxoglutarate synthase (66.7%) 2-oxoacid oxidoreductase (ferredoxin) (33.3%)" GO:0006979 (50%) "GO:0016903 (45.8%) GO:0047553 (4.2%)" response to oxidative stress (50%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors (45.8%) 2-oxoglutarate synthase activity (4.2%)" "IPR002869 (12.5%) IPR002880 (12.5%) IPR009014 (12.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" VFAYATHPIFSGNAANNLR root 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.2%) GO:0006164 (11.2%) GO:0009156 (10.8%)" "GO:0002189 (11.2%) GO:0005737 (11.2%) GO:0005829 (0%)" "GO:0000287 (11.2%) GO:0004749 (11.2%) GO:0016301 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.2%) purine nucleotide biosynthetic process (11.2%) ribonucleoside monophosphate biosynthetic process (10.8%)" "ribose phosphate diphosphokinase complex (11.2%) cytoplasm (11.2%) cytosol (0%)" "magnesium ion binding (11.2%) ribose phosphate diphosphokinase activity (11.2%) kinase activity (11.1%)" "IPR005946 (17%) IPR029057 (17%) IPR000836 (17%)" "Ribose-phosphate pyrophosphokinase (17%) Phosphoribosyltransferase-like (17%) Phosphoribosyltransferase domain (17%)" TGDLGTLDKDGFLYIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.2.1.3 (100%) long-chain-fatty-acid--CoA ligase (100%) GO:0016020 (50%) GO:0004467 (50%) membrane (50%) long-chain fatty acid-CoA ligase activity (50%) "IPR000873 (30.4%) IPR020845 (30.4%) IPR042099 (30.4%)" "AMP-dependent synthetase/ligase domain (30.4%) AMP-binding, conserved site (30.4%) ANL, N-terminal domain (30.4%)" DTYADPAQWNEKAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.7%) GO:0005829 (17.7%) "GO:0004612 (17.7%) GO:0005524 (17.7%) GO:0046872 (16.5%)" gluconeogenesis (17.7%) cytosol (17.7%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.7%) ATP binding (17.7%) metal ion binding (16.5%)" "IPR001272 (25.9%) IPR013035 (25.9%) IPR008210 (24.1%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.9%) Phosphoenolpyruvate carboxykinase, C-terminal (25.9%) Phosphoenolpyruvate carboxykinase, N-terminal (24.1%)" SKEIKDISGLTHGIGWCAPQQGACK Bacteria Bacteria GO:0016226 (33.3%) "GO:0005506 (33.3%) GO:0051536 (33.3%)" iron-sulfur cluster assembly (33.3%) "iron ion binding (33.3%) iron-sulfur cluster binding (33.3%)" IPR002871 (100%) NIF system FeS cluster assembly, NifU, N-terminal (100%) MITGIQITK root 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006950 (0.1%) "GO:0005829 (47.7%) GO:0005737 (0.1%)" "GO:0008861 (47.8%) GO:0016829 (3.7%) GO:0003824 (0.6%)" response to stress (0.1%) "cytosol (47.7%) cytoplasm (0.1%)" "formate C-acetyltransferase activity (47.8%) lyase activity (3.7%) catalytic activity (0.6%)" "IPR001150 (25.2%) IPR011140 (25%) IPR050244 (25%)" "Glycine radical domain (25.2%) Autonomous glycyl radical cofactor GrcA (25%) Autonomous Glycyl Radical Cofactor (25%)" LGFHLLFSPSDPRSR Escherichia coli Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli GO:0016020 (100%) membrane (100%) "IPR016181 (50%) IPR054597 (50%)" "Acyl-CoA N-acyltransferase (50%) N-acyl amino acid synthase FeeM, catalytic core (50%)" INIACRENTIMENPEIKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" GITINTSHVEYDTAKR GDTVYVNSGEDKGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (19.9%) "GO:0005840 (20.3%) GO:1990904 (19.9%)" "GO:0003735 (19.9%) GO:0019843 (19.9%)" translation (19.9%) "ribosome (20.3%) ribonucleoprotein complex (19.9%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%)" "IPR003256 (16.7%) IPR005824 (16.7%) IPR008991 (16.7%)" "Large ribosomal subunit protein uL24 (16.7%) KOW (16.7%) Translation protein SH3-like domain superfamily (16.7%)" YLYVGVRPEFR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 3.1.1.31 (100%) 6-phosphogluconolactonase (100%) "GO:0006006 (25%) GO:0009051 (24.4%) GO:0006098 (0%)" GO:0005829 (25%) "GO:0017057 (25.2%) GO:0016787 (0.3%) GO:0016853 (0.1%)" "glucose metabolic process (25%) pentose-phosphate shunt, oxidative branch (24.4%) pentose-phosphate shunt (0%)" cytosol (25%) "6-phosphogluconolactonase activity (25.2%) hydrolase activity (0.3%) isomerase activity (0.1%)" "IPR015943 (20.2%) IPR019405 (20.2%) IPR011045 (20.1%)" "WD40/YVTN repeat-like-containing domain superfamily (20.2%) Lactonase, 7-bladed beta-propeller (20.2%) Nitrous oxide reductase, N-terminal (20.1%)" GLNSSFAIYQDATGK Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.1.1.86 (87.2%) 1.1.1.- (12.8%)" "ketol-acid reductoisomerase (NADP(+)) (87.2%) With NAD(+) or NADP(+) as acceptor (12.8%)" "GO:0009097 (20.8%) GO:0009099 (20.8%)" "GO:0004455 (20.8%) GO:0046872 (20.8%) GO:0016853 (16.7%)" "isoleucine biosynthetic process (20.8%) L-valine biosynthetic process (20.8%)" "ketol-acid reductoisomerase activity (20.8%) metal ion binding (20.8%) isomerase activity (16.7%)" "IPR000506 (16.7%) IPR008927 (16.7%) IPR013023 (16.7%)" "Ketol-acid reductoisomerase, C-terminal (16.7%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.7%) Ketol-acid reductoisomerase (16.7%)" MDESMVTDYPQVNTSTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.14.12 (100%) Xaa-Xaa-Pro tripeptidyl-peptidase (100%) GO:0006508 (33.9%) "GO:0008236 (33%) GO:0008239 (33%)" proteolysis (33.9%) "serine-type peptidase activity (33%) dipeptidyl-peptidase activity (33%)" "IPR002469 (25.5%) IPR001375 (24.8%) IPR029058 (24.8%)" "Dipeptidylpeptidase IV, N-terminal domain (25.5%) Peptidase S9, prolyl oligopeptidase, catalytic domain (24.8%) Alpha/Beta hydrolase fold (24.8%)" TPVGNTAAICIYPR root 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (20%) GO:0016052 (20%) GO:0006018 (19.5%)" "GO:0005737 (19.9%) GO:0005829 (0.1%) GO:0016020 (0%)" "GO:0004139 (20%) GO:0016829 (0.3%) GO:0004645 (0%)" "deoxyribonucleotide catabolic process (20%) carbohydrate catabolic process (20%) 2-deoxyribose 1-phosphate catabolic process (19.5%)" "cytoplasm (19.9%) cytosol (0.1%) membrane (0%)" "deoxyribose-phosphate aldolase activity (20%) lyase activity (0.3%) 1,4-alpha-oligoglucan phosphorylase activity (0%)" "IPR002915 (25.1%) IPR011343 (25.1%) IPR013785 (25.1%)" "DeoC/FbaB/LacD aldolase (25.1%) Deoxyribose-phosphate aldolase (25.1%) Aldolase-type TIM barrel (25.1%)" YIDYKDPEFLK root GO:0006412 (25%) "GO:0022627 (24.9%) GO:0005840 (0.2%) GO:1990904 (0.1%)" "GO:0003735 (25%) GO:0070181 (24.9%) GO:0019843 (0.1%)" translation (25%) "cytosolic small ribosomal subunit (24.9%) ribosome (0.2%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (25%) small ribosomal subunit rRNA binding (24.9%) rRNA binding (0.1%)" "IPR001648 (33.2%) IPR018275 (33.2%) IPR036870 (33.2%)" "Small ribosomal subunit protein bS18 (33.2%) Small ribosomal subunit protein bS18, conserved site (33.2%) Small ribosomal subunit protein bS18 superfamily (33.2%)" TLDISAISFHK Pseudomonadati Bacteria Pseudomonadati 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (49.5%) "GO:0004318 (49.5%) GO:0141148 (0.7%) GO:0016491 (0.2%)" fatty acid biosynthetic process (49.5%) "enoyl-[acyl-carrier-protein] reductase (NADH) activity (49.5%) enoyl-[acyl-carrier-protein] reductase (NADPH) activity (0.7%) oxidoreductase activity (0.2%)" "IPR002347 (33.4%) IPR014358 (33.4%) IPR036291 (33.1%)" "Short-chain dehydrogenase/reductase SDR (33.4%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.4%) NAD(P)-binding domain superfamily (33.1%)" VYSGKIEAGSYIYNSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (20.3%) GO:0005737 (18.8%) "GO:0003746 (20.5%) GO:0005525 (20.3%) GO:0003924 (20.1%)" ribosome disassembly (20.3%) cytoplasm (18.8%) "translation elongation factor activity (20.5%) GTP binding (20.3%) GTPase activity (20.1%)" "IPR009000 (6.4%) IPR000795 (6.3%) IPR004161 (6.3%)" "Translation protein, beta-barrel domain superfamily (6.4%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" LGNPTNTQLEEK Bacillota Bacteria Bacillati Bacillota "4.4.1.11 (52.6%) 4.4.1.2 (47.4%)" "methionine gamma-lyase (52.6%) homocysteine desulfhydrase (47.4%)" "GO:0019346 (22%) GO:0009086 (4.9%)" GO:0005737 (22%) "GO:0018826 (22%) GO:0030170 (22%) GO:0047982 (7.3%)" "transsulfuration (22%) methionine biosynthetic process (4.9%)" cytoplasm (22%) "methionine gamma-lyase activity (22%) pyridoxal phosphate binding (22%) homocysteine desulfhydrase activity (7.3%)" "IPR000277 (17%) IPR006237 (17%) IPR015421 (17%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (17%) L-methionine gamma-lyase (17%) Pyridoxal phosphate-dependent transferase, major domain (17%)" MENATTEELIAQIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR010693 (100%) Divergent 4Fe-4S mono-cluster (100%) TALNVFTAEIENELHR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" ISHPWLVTSCEWDNKLIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.6%) GO:0006044 (32.6%)" "GO:0004342 (32.6%) GO:0016853 (2.3%)" "carbohydrate metabolic process (32.6%) N-acetylglucosamine metabolic process (32.6%)" "glucosamine-6-phosphate deaminase activity (32.6%) isomerase activity (2.3%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" GHTVYVQHTAGINSGFADDAYVAAGAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.1.1 (100%) alanine dehydrogenase (100%) GO:0042853 (25%) GO:0005886 (25%) "GO:0000166 (25%) GO:0000286 (25%)" L-alanine catabolic process (25%) plasma membrane (25%) "nucleotide binding (25%) alanine dehydrogenase activity (25%)" "IPR007698 (16.7%) IPR007886 (16.7%) IPR008141 (16.7%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (16.7%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (16.7%) Alanine dehydrogenase (16.7%)" AQLLADLADLDVLSTEDLKNRR root 2.1.3.15 (100%) acetyl-CoA carboxytransferase (100%) "GO:0006633 (16.3%) GO:2001295 (16%) GO:0006260 (0.2%)" "GO:0009317 (16.3%) GO:0005737 (0.2%) GO:0005829 (0.2%)" "GO:0003989 (16.3%) GO:0005524 (16.3%) GO:0016743 (16.3%)" "fatty acid biosynthetic process (16.3%) malonyl-CoA biosynthetic process (16%) DNA replication (0.2%)" "acetyl-CoA carboxylase complex (16.3%) cytoplasm (0.2%) cytosol (0.2%)" "acetyl-CoA carboxylase activity (16.3%) ATP binding (16.3%) carboxyl- or carbamoyltransferase activity (16.3%)" "IPR001095 (32.4%) IPR011763 (32.4%) IPR029045 (32.4%)" "Acetyl-CoA carboxylase, alpha subunit (32.4%) Acetyl-coenzyme A carboxyltransferase, C-terminal (32.4%) ClpP/crotonase-like domain superfamily (32.4%)" FLPNLHSHR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (32.5%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (30.7%) GO:0005840 (2.3%) GO:1990904 (1.8%)" "GO:0003735 (32.5%) GO:0019843 (0%)" "translation (32.5%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (30.7%) ribosome (2.3%) ribonucleoprotein complex (1.8%)" "structural constituent of ribosome (32.5%) rRNA binding (0%)" "IPR001383 (24.7%) IPR026569 (24.7%) IPR034704 (24.7%)" "Large ribosomal subunit protein bL28, bacteria (24.7%) Large ribosomal subunit protein bL28 (24.7%) Large ribosomal subunit protein bL28/bL31-like superfamily (24.7%)" VGIGHGNLAAMLLREETK Bacteria Bacteria IPR025964 (100%) GGGtGRT protein (100%) INPNDITEAMVSDHLTTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.5.1.- (100%) Transferring alkyl or aryl groups, other than methyl groups (100%) GO:0016094 (33.3%) "GO:0000287 (33.3%) GO:0045547 (33.3%)" polyprenol biosynthetic process (33.3%) "magnesium ion binding (33.3%) ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity (33.3%)" "IPR001441 (33.3%) IPR018520 (33.3%) IPR036424 (33.3%)" "Decaprenyl diphosphate synthase-like (33.3%) Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (33.3%) Decaprenyl diphosphate synthase-like superfamily (33.3%)" HGYEIADAEGNVIGVVTSGTMSPVLKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (17.6%) GO:0032259 (5.9%)" "GO:0005829 (17.6%) GO:0005960 (17.6%)" "GO:0004047 (17.6%) GO:0008483 (17.6%) GO:0008168 (5.9%)" "glycine decarboxylation via glycine cleavage system (17.6%) methylation (5.9%)" "cytosol (17.6%) glycine cleavage complex (17.6%)" "aminomethyltransferase activity (17.6%) transaminase activity (17.6%) methyltransferase activity (5.9%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" FDPNPDDTSRDNLMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.3.16 (66.7%) 2.3.3.1 (33.3%)" "citrate synthase (unknown stereospecificity) (66.7%) citrate (Si)-synthase (33.3%)" "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (25%) "GO:0036440 (20.7%) GO:0046912 (4.3%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (25%) "citrate synthase activity (20.7%) acyltransferase activity, acyl groups converted into alkyl on transfer (4.3%)" "IPR002020 (20.1%) IPR016142 (20.1%) IPR016143 (20.1%)" "Citrate synthase (20.1%) Citrate synthase-like, large alpha subdomain (20.1%) Citrate synthase-like, small alpha subdomain (20.1%)" MAELGTQLAHVDGGVPNIK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (19.9%) IPR018189 (19.9%) IPR035482 (19.9%)" "Phosphoglucose isomerase (PGI) (19.9%) Phosphoglucose isomerase, conserved site (19.9%) Phosphoglucose isomerase, SIS domain 2 (19.9%)" VAFKPVATVLMEQETVNIDGIDTTLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.3.5 (100%) chorismate synthase (100%) "GO:0008652 (16.7%) GO:0009073 (16.7%) GO:0009423 (16.7%)" GO:0005829 (16.7%) "GO:0004107 (16.7%) GO:0010181 (16.7%)" "amino acid biosynthetic process (16.7%) aromatic amino acid family biosynthetic process (16.7%) chorismate biosynthetic process (16.7%)" cytosol (16.7%) "chorismate synthase activity (16.7%) FMN binding (16.7%)" "IPR000453 (33.3%) IPR020541 (33.3%) IPR035904 (33.3%)" "Chorismate synthase (33.3%) Chorismate synthase, conserved site (33.3%) Chorismate synthase AroC superfamily (33.3%)" DIENAAILYDEIDRNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" GMVLCKPGQIKPHSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (20.1%) GO:0032045 (0.3%)" "GO:0003746 (20.3%) GO:0003924 (20.1%) GO:0005525 (20.1%)" "cytosol (20.1%) guanyl-nucleotide exchange factor complex (0.3%)" "translation elongation factor activity (20.3%) GTPase activity (20.1%) GTP binding (20.1%)" "IPR000795 (8.4%) IPR004161 (8.4%) IPR004541 (8.4%)" "Translational (tr)-type GTP-binding domain (8.4%) Translation elongation factor EFTu-like, domain 2 (8.4%) Translation elongation factor EFTu/EF1A, bacterial/organelle (8.4%)" LHFGSYHDVDSSELAFK root "3.6.5.- (50%) 3.6.5.3 (50%)" "Acting on GTP; involved in cellular and subcellular movement (50%) protein-synthesizing GTPase (50%)" "GO:0032790 (16.8%) GO:0006414 (0%)" "GO:0005737 (16.1%) GO:0005829 (0.1%) GO:0005739 (0%)" "GO:0003746 (17.1%) GO:0005525 (16.8%) GO:0003924 (16.4%)" "ribosome disassembly (16.8%) translational elongation (0%)" "cytoplasm (16.1%) cytosol (0.1%) mitochondrion (0%)" "translation elongation factor activity (17.1%) GTP binding (16.8%) GTPase activity (16.4%)" "IPR005517 (6.3%) IPR014721 (6.3%) IPR020568 (6.3%)" "Translation elongation factor EFG/EF2, domain IV (6.3%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.3%) Ribosomal protein uS5 domain 2-type superfamily (6.3%)" AVMCGQAPASNISHCWQSLEGIQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.135 (100%) neopullulanase (100%) GO:0009313 (47.6%) "GO:0004556 (47.6%) GO:0031216 (4.8%)" oligosaccharide catabolic process (47.6%) "alpha-amylase activity (47.6%) neopullulanase activity (4.8%)" "IPR006047 (33.3%) IPR013780 (33.3%) IPR017853 (33.3%)" "Glycosyl hydrolase family 13, catalytic domain (33.3%) Glycosyl hydrolase, all-beta (33.3%) Glycoside hydrolase superfamily (33.3%)" MGHIQLVVPVAHIWYFR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) GO:0000428 (16.9%) "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0000287 (16.1%)" DNA-templated transcription (16.8%) DNA-directed RNA polymerase complex (16.9%) "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) magnesium ion binding (16.1%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007080 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 1 (9.1%)" FRGNVTLHSDDAIYDEQVAVAEHNGTK Bifidobacterium adolescentis Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium adolescentis "1.-.-.- (50%) 1.4.3.5 (50%)" "Oxidoreductases (50%) pyridoxal 5'-phosphate synthase (50%)" GO:0016491 (100%) oxidoreductase activity (100%) "IPR011576 (50%) IPR012349 (50%)" "Pyridoxamine 5'-phosphate oxidase, N-terminal (50%) FMN-binding split barrel (50%)" TGDYDPNAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" TAVEPHIGGVQYFK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0032790 (25.4%) "GO:0003746 (25.4%) GO:0005525 (25.4%) GO:0003924 (23.9%)" ribosome disassembly (25.4%) "translation elongation factor activity (25.4%) GTP binding (25.4%) GTPase activity (23.9%)" "IPR009000 (8%) IPR027417 (8%) IPR053905 (8%)" "Translation protein, beta-barrel domain superfamily (8%) P-loop containing nucleoside triphosphate hydrolase (8%) Elongation factor G-like, domain II (8%)" IVSVGPDREQTIIR Pseudomonadati Bacteria Pseudomonadati 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0004019 (16.7%) GO:0005525 (16.7%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) adenylosuccinate synthase activity (16.7%) GTP binding (16.7%)" "IPR001114 (14.3%) IPR018220 (14.3%) IPR027417 (14.3%)" "Adenylosuccinate synthetase (14.3%) Adenylosuccinate synthase, GTP-binding site (14.3%) P-loop containing nucleoside triphosphate hydrolase (14.3%)" LLPFCQDTGTAIIHGEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (22.7%) "GO:0046872 (23%) GO:0051539 (23%) GO:0004333 (21.8%)" tricarboxylic acid cycle (22.7%) "metal ion binding (23%) 4 iron, 4 sulfur cluster binding (23%) fumarate hydratase activity (21.8%)" "IPR004646 (18.6%) IPR051208 (18.6%) IPR004647 (18.4%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (18.6%) Class-I Fumarase/Tartrate Dehydratase (18.6%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (18.4%)" SGQKVPEMTPEIVEGISNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" EGRPSEGETLIAR root 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.3%) GO:0006396 (13.9%) GO:0006401 (0.1%)" "GO:0005829 (14.3%) GO:0016020 (0%) GO:1990061 (0%)" "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "mRNA catabolic process (14.3%) RNA processing (13.9%) RNA catabolic process (0.1%)" "cytosol (14.3%) membrane (0%) bacterial degradosome (0%)" "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8%) IPR012162 (8%) IPR020568 (8%)" "Exoribonuclease, phosphorolytic domain 1 (8%) Polyribonucleotide nucleotidyltransferase (8%) Ribosomal protein uS5 domain 2-type superfamily (8%)" ILEVSGCDPQTTELDGKPLADHLLAPTR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 6.3.3.1 (100%) phosphoribosylformylglycinamidine cyclo-ligase (100%) "GO:0006189 (16.6%) GO:0046084 (16.6%) GO:0006164 (0.1%)" GO:0005829 (16.6%) "GO:0004637 (16.6%) GO:0004641 (16.6%) GO:0005524 (16.6%)" "'de novo' IMP biosynthetic process (16.6%) adenine biosynthetic process (16.6%) purine nucleotide biosynthetic process (0.1%)" cytosol (16.6%) "phosphoribosylamine-glycine ligase activity (16.6%) phosphoribosylformylglycinamidine cyclo-ligase activity (16.6%) ATP binding (16.6%)" "IPR004733 (20.3%) IPR010918 (20.3%) IPR036676 (20.3%)" "Phosphoribosylformylglycinamidine cyclo-ligase (20.3%) PurM-like, C-terminal domain (20.3%) PurM-like, C-terminal domain superfamily (20.3%)" NYKSEEEIAEIEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0030145 (25%) GO:0070006 (25%)" proteolysis (25%) cytosol (25%) "manganese ion binding (25%) metalloaminopeptidase activity (25%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" VDDLNSHGFLPQAEMEALVEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0000166 (50%) GO:0016798 (50%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (50%)" "IPR000683 (25%) IPR036291 (25%) IPR049303 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) NAD(P)-binding domain superfamily (25%) Glycosyl hydrolase 109, C-terminal domain (25%)" MKTTPFTETHIALGAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (14.7%) GO:0032259 (11%) GO:0006546 (0.7%)" "GO:0005829 (15.4%) GO:0005960 (15.4%)" "GO:0004047 (15.4%) GO:0008483 (15.4%) GO:0008168 (11%)" "glycine decarboxylation via glycine cleavage system (14.7%) methylation (11%) glycine catabolic process (0.7%)" "cytosol (15.4%) glycine cleavage complex (15.4%)" "aminomethyltransferase activity (15.4%) transaminase activity (15.4%) methyltransferase activity (11%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" KMEVGLIGSCTNSSYQDISR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) "GO:0005829 (20%) GO:0005739 (0.1%)" "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) "cytosol (20%) mitochondrion (0.1%)" "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR015928 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase/3-isopropylmalate dehydratase, swivel (11.1%)" ELPVIGFIAHMDTSPDMSGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.11.4 (100%) tripeptide aminopeptidase (100%) "GO:0006508 (16.7%) GO:0043171 (15.7%) GO:0006518 (0.9%)" GO:0005829 (16.7%) "GO:0008237 (16.7%) GO:0008270 (16.7%) GO:0045148 (16.7%)" "proteolysis (16.7%) peptide catabolic process (15.7%) peptide metabolic process (0.9%)" cytosol (16.7%) "metallopeptidase activity (16.7%) zinc ion binding (16.7%) tripeptide aminopeptidase activity (16.7%)" "IPR001261 (20%) IPR002933 (20%) IPR010161 (20%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%) Peptidase M20 (20%) Peptidase M20B, tripeptide aminopeptidase (20%)" VLALCTPDKEAEATAAGADYVGLDEYINKIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006412 (16.7%) GO:0006417 (16.7%)" GO:0015934 (16.7%) "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" "translation (16.7%) regulation of translation (16.7%)" large ribosomal subunit (16.7%) "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR002143 (16.7%) IPR005878 (16.7%) IPR016095 (16.7%)" "Large ribosomal subunit protein uL1 (16.7%) Large ribosomal subunit protein uL1, bacteria (16.7%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" AAVPSGASTGENEAIELR Bacteria Bacteria 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.8%) "GO:0000015 (16.8%) GO:0005576 (16.8%) GO:0009986 (15.9%)" "GO:0000287 (16.8%) GO:0004634 (16.8%)" glycolytic process (16.8%) "phosphopyruvate hydratase complex (16.8%) extracellular region (16.8%) cell surface (15.9%)" "magnesium ion binding (16.8%) phosphopyruvate hydratase activity (16.8%)" "IPR000941 (16.8%) IPR020811 (16.8%) IPR029017 (16.8%)" "Enolase (16.8%) Enolase, N-terminal (16.8%) Enolase-like, N-terminal (16.8%)" NGYLTAEQR root 6.3.2.1 (100%) pantoate--beta-alanine ligase (AMP-forming) (100%) GO:0015940 (24.8%) GO:0005829 (24.8%) "GO:0004592 (24.8%) GO:0005524 (24.8%) GO:0016874 (0.5%)" pantothenate biosynthetic process (24.8%) cytosol (24.8%) "pantoate-beta-alanine ligase activity (24.8%) ATP binding (24.8%) ligase activity (0.5%)" "IPR003721 (26.9%) IPR042176 (26.9%) IPR014729 (26.7%)" "Pantoate-beta-alanine ligase (26.9%) Pantoate-beta-alanine ligase, C-terminal domain (26.9%) Rossmann-like alpha/beta/alpha sandwich fold (26.7%)" NYLEAWDTYKEGEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.22 (100%) ribosylnicotinamide kinase (100%) "GO:0016301 (66.7%) GO:0050262 (33.3%)" "kinase activity (66.7%) ribosylnicotinamide kinase activity (33.3%)" "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" SRGNVNPDVYAIEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.4.1.11 (100%) glycogen(starch) synthase (100%) GO:0009103 (50%) "GO:0016757 (41.7%) GO:0004373 (8.3%)" lipopolysaccharide biosynthetic process (50%) "glycosyltransferase activity (41.7%) alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (8.3%)" "IPR001296 (50%) IPR028098 (50%)" "Glycosyl transferase, family 1 (50%) Glycosyltransferase subfamily 4-like, N-terminal domain (50%)" STPKDHGLENLIEGELKPGSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25.4%) GO:0044205 (25.4%)" "GO:0004588 (25.4%) GO:0000287 (23.9%)" "pyrimidine nucleobase biosynthetic process (25.4%) 'de novo' UMP biosynthetic process (25.4%)" "orotate phosphoribosyltransferase activity (25.4%) magnesium ion binding (23.9%)" "IPR000836 (25%) IPR004467 (25%) IPR023031 (25%)" "Phosphoribosyltransferase domain (25%) Orotate phosphoribosyl transferase domain (25%) Orotate phosphoribosyltransferase (25%)" YSGTELEHDGKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0051085 (1.2%) GO:0005737 (16.5%) "GO:0005524 (16.5%) GO:0044183 (16.5%) GO:0046872 (16.5%)" obsolete chaperone cofactor-dependent protein refolding (1.2%) cytoplasm (16.5%) "ATP binding (16.5%) protein folding chaperone (16.5%) metal ion binding (16.5%)" "IPR011032 (33.3%) IPR020818 (33.3%) IPR037124 (33.3%)" "GroES-like superfamily (33.3%) GroES chaperonin family (33.3%) GroES chaperonin superfamily (33.3%)" DVAGQAQTGTGK root "3.6.4.13 (99.7%) 3.6.1.- (0.3%)" "RNA helicase (99.7%) In phosphorus-containing anhydrides (0.3%)" "GO:0006401 (15.4%) GO:0009409 (0%) GO:0006396 (0%)" "GO:0005829 (16.8%) GO:0016020 (0%) GO:0005840 (0%)" "GO:0003724 (16.8%) GO:0005524 (16.8%) GO:0003723 (15.8%)" "RNA catabolic process (15.4%) response to cold (0%) RNA processing (0%)" "cytosol (16.8%) membrane (0%) ribosome (0%)" "RNA helicase activity (16.8%) ATP binding (16.8%) RNA binding (15.8%)" "IPR011545 (12.4%) IPR027417 (12.4%) IPR050079 (12.4%)" "DEAD/DEAH-box helicase domain (12.4%) P-loop containing nucleoside triphosphate hydrolase (12.4%) DEAD box RNA helicase (12.4%)" WTCDGSPEFTIENVEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005524 (24.6%) GO:0016887 (24.6%) GO:0051082 (24.6%)" "ATP binding (24.6%) ATP hydrolysis activity (24.6%) unfolded protein binding (24.6%)" "IPR001404 (19.9%) IPR019805 (19.9%) IPR020568 (19.9%)" "Heat shock protein Hsp90 family (19.9%) Heat shock protein Hsp90, conserved site (19.9%) Ribosomal protein uS5 domain 2-type superfamily (19.9%)" GAILKQDVLINK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" SFASDNNSSVHPR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "4.1.2.48 (75%) 4.1.2.5 (25%)" "low-specificity L-threonine aldolase (75%) L-threonine aldolase (25%)" GO:0006520 (50%) "GO:0016829 (47.5%) GO:0004793 (2.5%)" amino acid metabolic process (50%) "lyase activity (47.5%) threonine aldolase activity (2.5%)" "IPR001597 (25%) IPR015421 (25%) IPR015422 (25%)" "Aromatic amino acid beta-eliminating lyase/threonine aldolase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%) Pyridoxal phosphate-dependent transferase, small domain (25%)" RLFVVDTFCGANEATR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.1%) GO:0005829 (17.1%) "GO:0004612 (17.1%) GO:0005524 (17.1%) GO:0046872 (17.1%)" gluconeogenesis (17.1%) cytosol (17.1%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.1%) ATP binding (17.1%) metal ion binding (17.1%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" HYENVSYETSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.6%) GO:0006164 (0.7%)" GO:0005737 (20.3%) "GO:0004642 (20.3%) GO:0005524 (19.6%) GO:0046872 (19.6%)" "'de novo' IMP biosynthetic process (19.6%) purine nucleotide biosynthetic process (0.7%)" cytoplasm (20.3%) "phosphoribosylformylglycinamidine synthase activity (20.3%) ATP binding (19.6%) metal ion binding (19.6%)" "IPR010918 (11.3%) IPR036676 (11.3%) IPR036921 (11.3%)" "PurM-like, C-terminal domain (11.3%) PurM-like, C-terminal domain superfamily (11.3%) PurM-like, N-terminal domain superfamily (11.3%)" GFGMDIYAFDAFCPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.95 (66.7%) 1.1.1.81 (22.2%) 1.1.1.290 (11.1%)" "phosphoglycerate dehydrogenase (66.7%) hydroxypyruvate reductase (22.2%) 4-phosphoerythronate dehydrogenase (11.1%)" "GO:0051287 (50%) GO:0016616 (36.4%) GO:0004617 (10.6%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (36.4%) phosphoglycerate dehydrogenase activity (10.6%)" "IPR006139 (33.3%) IPR006140 (33.3%) IPR036291 (33.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" GWLIDNSVTTDNKTDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003677 (100%) DNA binding (100%) "IPR049893 (51.6%) IPR027824 (48.4%)" "Bvu_2165-like, IHF-HU-like DNA-binding domain (51.6%) Domain of unknown function DUF4469 with IG-like fold (48.4%)" ASFAVYNTKEEVDALVAGIER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.8.1.7 (100%) cysteine desulfurase (100%) GO:0006534 (32.1%) "GO:0030170 (32.1%) GO:0031071 (32.1%) GO:0008483 (3.6%)" cysteine metabolic process (32.1%) "pyridoxal phosphate binding (32.1%) cysteine desulfurase activity (32.1%) transaminase activity (3.6%)" "IPR000192 (16.7%) IPR010970 (16.7%) IPR015421 (16.7%)" "Aminotransferase class V domain (16.7%) Cysteine desulfurase, SufS (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" VAIQGIAGSYHDIAAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.2.1.51 (100%) prephenate dehydratase (100%) GO:0009094 (33.3%) GO:0005737 (33.3%) GO:0004664 (33.3%) L-phenylalanine biosynthetic process (33.3%) cytoplasm (33.3%) prephenate dehydratase activity (33.3%) "IPR001086 (25%) IPR002912 (25%) IPR008242 (25%)" "Prephenate dehydratase (25%) ACT domain (25%) Bifunctional P-protein, chorismate mutase/prephenate dehydratase (25%)" AIGFESDRDILEIFNLAEEVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (15.6%) GO:0006508 (10.9%)" GO:0000428 (15.6%) "GO:0003677 (15.6%) GO:0003899 (15.6%) GO:0032549 (15.6%)" "DNA-templated transcription (15.6%) proteolysis (10.9%)" DNA-directed RNA polymerase complex (15.6%) "DNA binding (15.6%) DNA-directed RNA polymerase activity (15.6%) ribonucleoside binding (15.6%)" "IPR007120 (7.3%) IPR007121 (7.3%) IPR007641 (7.3%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.3%) RNA polymerase, beta subunit, conserved site (7.3%) RNA polymerase Rpb2, domain 7 (7.3%)" NADPADDASAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20.1%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20.1%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007642 (8%) IPR015712 (8%) IPR007645 (7.9%)" "RNA polymerase Rpb2, domain 2 (8%) DNA-directed RNA polymerase, subunit 2 (8%) RNA polymerase Rpb2, domain 3 (7.9%)" VINQGEGAIPAR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (36.8%) GO:0061077 (0.3%)" "GO:0042597 (23.4%) GO:0005829 (0.3%)" "GO:0003755 (37.1%) GO:0016853 (1.2%) GO:0005528 (0.3%)" "protein folding (36.8%) obsolete chaperone-mediated protein folding (0.3%)" "periplasmic space (23.4%) cytosol (0.3%)" "peptidyl-prolyl cis-trans isomerase activity (37.1%) isomerase activity (1.2%) FK506 binding (0.3%)" "IPR000774 (25.4%) IPR046357 (25.2%) IPR001179 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25.4%) Peptidyl-prolyl cis-trans isomerase domain superfamily (25.2%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%)" YVQPTDVTPGYSTVSDADIVVLR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" INAEDKPALR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022627 (25%) "GO:0003723 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "RNA binding (25%) structural constituent of ribosome (25%)" "IPR000754 (20.8%) IPR014721 (20.8%) IPR020568 (20.8%)" "Small ribosomal subunit protein uS9 (20.8%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (20.8%) Ribosomal protein uS5 domain 2-type superfamily (20.8%)" AIGVQLYSVRDDLKTDFDGTMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR006311 (20%) IPR013022 (20%) IPR019546 (20%)" "Twin-arginine translocation pathway, signal sequence (20%) Xylose isomerase-like, TIM barrel domain (20%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (20%)" EMMWIGGGAGMAPLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "7.2.1.1 (99%) 1.6.5.- (1%)" "NADH:ubiquinone reductase (Na(+)-transporting) (99%) With a quinone or similar compound as acceptor (1%)" GO:0006814 (16.7%) "GO:0005886 (16.5%) GO:0016020 (0.2%)" "GO:0016655 (16.7%) GO:0051537 (16.7%) GO:0009055 (16.5%)" sodium ion transport (16.7%) "plasma membrane (16.5%) membrane (0.2%)" "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (16.7%) 2 iron, 2 sulfur cluster binding (16.7%) electron transfer activity (16.5%)" "IPR001433 (10.2%) IPR008333 (10.2%) IPR010205 (10.2%)" "Oxidoreductase FAD/NAD(P)-binding (10.2%) Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain (10.2%) Na(+)-translocating NADH-quinone reductase subunit F (10.2%)" CEVEFIRDLFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (16.7%) "GO:0000287 (16.7%) GO:0004743 (16.7%) GO:0005524 (16.7%)" response to stress (16.7%) "magnesium ion binding (16.7%) pyruvate kinase activity (16.7%) ATP binding (16.7%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" TTGFYQLVEFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.8%) "GO:0005737 (16.8%) GO:0005840 (16.8%) GO:1990904 (16%)" "GO:0003735 (16.8%) GO:0070181 (16.8%)" translation (16.8%) "cytoplasm (16.8%) ribosome (16.8%) ribonucleoprotein complex (16%)" "structural constituent of ribosome (16.8%) small ribosomal subunit rRNA binding (16.8%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" YAWEEAEHAAK Bacteria Bacteria "1.11.1.1 (94.4%) 1.14.13.81 (5.6%)" "NADH peroxidase (94.4%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (5.6%)" "GO:0005506 (50%) GO:0016491 (23.8%) GO:0004601 (18.1%)" "iron ion binding (50%) oxidoreductase activity (23.8%) peroxidase activity (18.1%)" "IPR003251 (12.5%) IPR009040 (12.5%) IPR009078 (12.5%)" "Rubrerythrin, diiron-binding domain (12.5%) Ferritin-like diiron domain (12.5%) Ferritin-like superfamily (12.5%)" LVIFDLDGTLLNTIADLAHSTNHALR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.3.18 (100%) phosphoglycolate phosphatase (100%) GO:0006281 (33.3%) GO:0005829 (33.3%) GO:0008967 (33.3%) DNA repair (33.3%) cytosol (33.3%) phosphoglycolate phosphatase activity (33.3%) "IPR006439 (16.5%) IPR023198 (16.5%) IPR023214 (16.5%)" "HAD hydrolase, subfamily IA (16.5%) Phosphoglycolate phosphatase-like, domain 2 (16.5%) HAD superfamily (16.5%)" SSVDILVPDLPESVADATVATWHK root "2.3.1.61 (98%) 2.3.1.- (1.8%) 2.3.-.- (0.1%)" "dihydrolipoyllysine-residue succinyltransferase (98%) Transferring groups other than amino-acyl groups (1.8%) Acyltransferases (0.1%)" "GO:0006099 (20%) GO:0033512 (19.2%) GO:0006086 (0%)" "GO:0005829 (20%) GO:0045252 (19.1%) GO:0005737 (0.3%)" "GO:0004149 (20.4%) GO:0031405 (0.3%) GO:0016407 (0.3%)" "tricarboxylic acid cycle (20%) L-lysine catabolic process to acetyl-CoA via saccharopine (19.2%) pyruvate decarboxylation to acetyl-CoA (0%)" "cytosol (20%) oxoglutarate dehydrogenase complex (19.1%) cytoplasm (0.3%)" "dihydrolipoyllysine-residue succinyltransferase activity (20.4%) lipoic acid binding (0.3%) acetyltransferase activity (0.3%)" "IPR011053 (11.4%) IPR000089 (11.3%) IPR003016 (11.3%)" "Single hybrid motif (11.4%) Biotin/lipoyl attachment (11.3%) 2-oxo acid dehydrogenase, lipoyl-binding site (11.3%)" INALKEQFDNQDNGQDDLDLTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002319 (14.3%) IPR004188 (14.3%) IPR004529 (14.3%)" "Phenylalanyl-tRNA synthetase (14.3%) Phenylalanine-tRNA ligase, class II, N-terminal (14.3%) Phenylalanyl-tRNA synthetase, class IIc, alpha subunit (14.3%)" VINDNFGIIEGLMTTVHATTATQK root "1.2.1.- (84.3%) 1.2.1.12 (15.7%)" "With NAD(+) or NADP(+) as acceptor (84.3%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (15.7%)" "GO:0006006 (18.5%) GO:0072524 (17.7%) GO:0006096 (1.8%)" "GO:0005829 (1.3%) GO:0005737 (0.5%) GO:0005576 (0%)" "GO:0051287 (20%) GO:0050661 (18.5%) GO:0004365 (16.3%)" "glucose metabolic process (18.5%) pyridine-containing compound metabolic process (17.7%) glycolytic process (1.8%)" "cytosol (1.3%) cytoplasm (0.5%) extracellular region (0%)" "NAD binding (20%) NADP binding (18.5%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (16.3%)" "IPR020829 (17.3%) IPR020831 (17.3%) IPR036291 (17%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.3%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.3%) NAD(P)-binding domain superfamily (17%)" GVWNVEEFNPDPFMK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.5.1.7 (100%) saccharopine dehydrogenase (NAD(+), L-lysine-forming) (100%) "IPR032095 (35.5%) IPR005097 (32.3%) IPR036291 (32.3%)" "Saccharopine dehydrogenase-like, C-terminal (35.5%) Saccharopine dehydrogenase, NADP binding domain (32.3%) NAD(P)-binding domain superfamily (32.3%)" TDLLLGLGNVGGIMR Bacillota Bacteria Bacillati Bacillota 2.1.1.74 (100%) methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferas[NAD(P)H-oxidizing] (100%) "GO:0002098 (26.2%) GO:0030488 (26.2%) GO:0032259 (0.8%)" GO:0005829 (8.2%) "GO:0050660 (26.2%) GO:0016491 (5.5%) GO:0051539 (5.5%)" "tRNA wobble uridine modification (26.2%) tRNA methylation (26.2%) methylation (0.8%)" cytosol (8.2%) "flavin adenine dinucleotide binding (26.2%) oxidoreductase activity (5.5%) 4 iron, 4 sulfur cluster binding (5.5%)" "IPR036188 (38.3%) IPR040131 (38.3%) IPR002218 (18.9%)" "FAD/NAD(P)-binding domain superfamily (38.3%) MnmG, N-terminal domain (38.3%) tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related (18.9%)" LQTSSSAVTATAPSQPNEGAEEVSGRPVAAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae LSITKEPNGSNPVVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0004784 (50%) GO:0046872 (50%)" "superoxide dismutase activity (50%) metal ion binding (50%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" VVCEVVSPLVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (15.7%) GO:0003723 (1%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (15.7%) RNA binding (1%)" "IPR001787 (33.3%) IPR028909 (33.3%) IPR036164 (33.3%)" "Large ribosomal subunit protein bL21 (33.3%) Large ribosomal subunit protein bL21-like (33.3%) Large ribosomal subunit protein bL21-like superfamily (33.3%)" KIEILANFHPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (19.8%) IPR018189 (19.8%) IPR035476 (19.8%)" "Phosphoglucose isomerase (PGI) (19.8%) Phosphoglucose isomerase, conserved site (19.8%) Phosphoglucose isomerase, SIS domain 1 (19.8%)" VMLLFTNPTDVER root "2.7.1.191 (98.3%) 2.7.1.- (1.1%) 2.7.1.69 (0.6%)" "protein-N(pi)-phosphohistidine--D-mannose phosphotransferase (98.3%) Phosphotransferases with an alcohol group as acceptor (1.1%) Transferred entry: 2.7.1.191, 2.7.1.192, 2.7.1.193, 2.7.1.194, 2.7.1.1952.7.1.196, 2.7.1.197, 2.7.1.198, 2.7.1.199, 2.7.1.200, 2.7.1.2012.7.1.202, 2.7.1.203, 2.7.1.204, 2.7.1.205, 2.7.1.206, 2.7.1.207 an2.7.1.208 (0.6%)" "GO:0009401 (20.1%) GO:0015761 (0%) GO:0015764 (0%)" "GO:0005737 (20.1%) GO:0005886 (19%) GO:0016020 (0.1%)" "GO:0008982 (20.1%) GO:0016301 (20.1%) GO:0016740 (0.1%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (20.1%) mannose transmembrane transport (0%) N-acetylglucosamine transport (0%)" "cytoplasm (20.1%) plasma membrane (19%) membrane (0.1%)" "protein-N(PI)-phosphohistidine-sugar phosphotransferase activity (20.1%) kinase activity (20.1%) transferase activity (0.1%)" "IPR004720 (13%) IPR036667 (13%) IPR018455 (12.7%)" "Phosphotransferase system, sorbose subfamily IIB component (13%) Phosphotransferase system, sorbose subfamily IIB component superfamily (13%) Phosphotransferase system, sorbose subfamily IIB component, subgroup (12.7%)" ELLSQYDFPGDDTPIVR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0%) GO:0046677 (0%)" "GO:0005829 (18%) GO:0032045 (8.6%) GO:0005886 (1.1%)" "GO:0003746 (18.2%) GO:0005525 (18%) GO:0003924 (17.2%)" "translational elongation (0%) response to antibiotic (0%)" "cytosol (18%) guanyl-nucleotide exchange factor complex (8.6%) plasma membrane (1.1%)" "translation elongation factor activity (18.2%) GTP binding (18%) GTPase activity (17.2%)" "IPR050055 (11.2%) IPR027417 (11.1%) IPR000795 (10.6%)" "Elongation factor Tu GTPase (11.2%) P-loop containing nucleoside triphosphate hydrolase (11.1%) Translational (tr)-type GTP-binding domain (10.6%)" VIPSIAYTEPEVAWVGLTEK root "1.8.1.4 (99.8%) 1.-.-.- (0.1%) 1.8.1.7 (0.1%)" "dihydrolipoyl dehydrogenase (99.8%) Oxidoreductases (0.1%) glutathione-disulfide reductase (0.1%)" "GO:0006103 (20.4%) GO:0006979 (20.2%) GO:0006090 (0%)" "GO:0005737 (18.2%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0004148 (20.4%) GO:0050660 (20.4%) GO:0016491 (0.2%)" "2-oxoglutarate metabolic process (20.4%) response to oxidative stress (20.2%) pyruvate metabolic process (0%)" "cytoplasm (18.2%) cytosol (0%) plasma membrane (0%)" "dihydrolipoyl dehydrogenase (NADH) activity (20.4%) flavin adenine dinucleotide binding (20.4%) oxidoreductase activity (0.2%)" "IPR004099 (12.7%) IPR016156 (12.7%) IPR050151 (12.7%)" "Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.7%) FAD/NAD-linked reductase, dimerisation domain superfamily (12.7%) Class-I pyridine nucleotide-disulfide oxidoreductase (12.7%)" SRVCQVTGKRPVTGNNR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (32.9%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (32.6%) GO:0005840 (0.9%) GO:1990904 (0.4%)" "GO:0003735 (33%) GO:0019843 (0%)" "translation (32.9%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (32.6%) ribosome (0.9%) ribonucleoprotein complex (0.4%)" "structural constituent of ribosome (33%) rRNA binding (0%)" "IPR001383 (24.9%) IPR026569 (24.9%) IPR034704 (24.9%)" "Large ribosomal subunit protein bL28, bacteria (24.9%) Large ribosomal subunit protein bL28 (24.9%) Large ribosomal subunit protein bL28/bL31-like superfamily (24.9%)" ISGGEVPTIITDVTMAASGIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.1.1.131 (81.8%) 2.1.1.- (18.2%)" "precorrin-3B C(17)-methyltransferase (81.8%) Methyltransferases (18.2%)" "GO:0009236 (25%) GO:0032259 (25%)" "GO:0016993 (25%) GO:0008168 (14.6%) GO:0030789 (10.4%)" "cobalamin biosynthetic process (25%) methylation (25%)" "precorrin-8X methylmutase activity (25%) methyltransferase activity (14.6%) precorrin-3B C17-methyltransferase activity (10.4%)" "IPR000878 (11.1%) IPR003722 (11.1%) IPR006363 (11.1%)" "Tetrapyrrole methylase (11.1%) Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC (11.1%) Precorrin-3B C17-methyltransferase domain (11.1%)" AGGPEPENNPTLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (31.9%) GO:0005829 (33.4%) "GO:0003677 (33.7%) GO:0016779 (1%)" regulation of DNA-templated transcription (31.9%) cytosol (33.4%) "DNA binding (33.7%) nucleotidyltransferase activity (1%)" "IPR002876 (16.8%) IPR049083 (16.8%) IPR048300 (16.7%)" "Transcriptional regulator TACO1-like (16.8%) TACO1/YebC-like, N-terminal domain (16.8%) TACO1/YebC-like, second and third domains (16.7%)" LGAYECILDQHSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.5%) GO:0044210 (11.5%)" "GO:0005829 (11.5%) GO:0097268 (11.5%)" "GO:0003883 (11.5%) GO:0005524 (11.5%) GO:0042802 (11.5%)" "pyrimidine nucleobase biosynthetic process (11.5%) 'de novo' CTP biosynthetic process (11.5%)" "cytosol (11.5%) cytoophidium (11.5%)" "CTP synthase activity (11.5%) ATP binding (11.5%) identical protein binding (11.5%)" "IPR029062 (17.6%) IPR004468 (16.5%) IPR017456 (16.5%)" "Class I glutamine amidotransferase-like (17.6%) CTP synthase (16.5%) CTP synthase, N-terminal (16.5%)" GGTMIDDTFPVFNTMHEAVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.2.1.5 (100%) succinate--CoA ligase (ADP-forming) (100%) GO:0006099 (20%) GO:0009361 (20%) "GO:0000166 (20%) GO:0004775 (20%) GO:0004776 (20%)" tricarboxylic acid cycle (20%) succinate-CoA ligase complex (ADP-forming) (20%) "nucleotide binding (20%) succinate-CoA ligase (ADP-forming) activity (20%) succinate-CoA ligase (GDP-forming) activity (20%)" "IPR003781 (14.3%) IPR005810 (14.3%) IPR005811 (14.3%)" "CoA-binding (14.3%) Succinyl-CoA ligase, alpha subunit (14.3%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.3%)" TAASEVFNTVIIPDLQFAVENLPNATFAGNSHR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" ADMLYAEIDRNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.9%) GO:0008615 (19.7%)" GO:0005737 (19.9%) "GO:0004648 (19.9%) GO:0030170 (19.9%) GO:0008483 (0.5%)" "L-serine biosynthetic process (19.9%) pyridoxine biosynthetic process (19.7%)" cytoplasm (19.9%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.9%) pyridoxal phosphate binding (19.9%) transaminase activity (0.5%)" "IPR000192 (20.1%) IPR022278 (20.1%) IPR015421 (19.9%)" "Aminotransferase class V domain (20.1%) Phosphoserine aminotransferase (20.1%) Pyridoxal phosphate-dependent transferase, major domain (19.9%)" VGSFDAGFGSSYLAR Bacteria Bacteria 4.1.3.36 (100%) 1,4-dihydroxy-2-naphthoyl-CoA synthase (100%) "GO:0009234 (32.4%) GO:0042372 (2.9%)" GO:0005829 (32.4%) GO:0008935 (32.4%) "menaquinone biosynthetic process (32.4%) phylloquinone biosynthetic process (2.9%)" cytosol (32.4%) 1,4-dihydroxy-2-naphthoyl-CoA synthase activity (32.4%) "IPR001753 (20.4%) IPR029045 (20.4%) IPR014748 (20.3%)" "Enoyl-CoA hydratase/isomerase (20.4%) ClpP/crotonase-like domain superfamily (20.4%) Enoyl-CoA hydratase, C-terminal (20.3%)" GGVEPQSENVWR Bacteria Bacteria "GO:0032790 (20%) GO:0006412 (0.2%)" "GO:0005737 (19.8%) GO:0005840 (0.1%)" "GO:0003924 (20%) GO:0005525 (20%) GO:0003746 (19.8%)" "ribosome disassembly (20%) translation (0.2%)" "cytoplasm (19.8%) ribosome (0.1%)" "GTPase activity (20%) GTP binding (20%) translation elongation factor activity (19.8%)" "IPR000795 (6.3%) IPR005225 (6.3%) IPR027417 (6.3%)" "Translational (tr)-type GTP-binding domain (6.3%) Small GTP-binding domain (6.3%) P-loop containing nucleoside triphosphate hydrolase (6.3%)" HGLAPEEVLAFIHGK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "3.1.3.- (57.5%) 3.1.3.23 (37.5%) 3.1.3.22 (2.5%)" "Phosphoric monoester hydrolases (57.5%) sugar-phosphatase (37.5%) mannitol-1-phosphatase (2.5%)" GO:0005975 (0.3%) "GO:0043136 (32.7%) GO:0050308 (32.7%) GO:0046872 (31.7%)" carbohydrate metabolic process (0.3%) "sn-glycerol 3-phosphatase activity (32.7%) sugar-phosphatase activity (32.7%) metal ion binding (31.7%)" "IPR023198 (20.3%) IPR023214 (20.1%) IPR036412 (20.1%)" "Phosphoglycolate phosphatase-like, domain 2 (20.3%) HAD superfamily (20.1%) HAD-like superfamily (20.1%)" TITPGDIQVMSTGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.13.11.24 (100%) quercetin 2,3-dioxygenase (100%) "GO:0046872 (85%) GO:0008127 (15%)" "metal ion binding (85%) quercetin 2,3-dioxygenase activity (15%)" "IPR003829 (20%) IPR011051 (20%) IPR012093 (20%)" "Pirin, N-terminal domain (20%) RmlC-like cupin domain superfamily (20%) Pirin (20%)" QGVVDKIQALVDAGEYPDKLF Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016740 (100%) transferase activity (100%) IPR029044 (100%) Nucleotide-diphospho-sugar transferases (100%) EIVDEKGADTEALGLSLFSFSSMKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (44%) IPR019734 (44%) IPR013105 (12%)" "Tetratricopeptide-like helical domain superfamily (44%) Tetratricopeptide repeat (44%) Tetratricopeptide repeat 2 (12%)" AKLENFIVDLVGDNHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) NKPVFATGIGNLFEPVELSLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.148 (100%) 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (100%) "GO:0016114 (25%) GO:0019288 (25%)" "GO:0005524 (25%) GO:0050515 (25%)" "terpenoid biosynthetic process (25%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (25%)" "ATP binding (25%) 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity (25%)" "IPR004424 (16.8%) IPR006204 (16.8%) IPR014721 (16.8%)" "4-diphosphocytidyl-2C-methyl-D-erythritol kinase (16.8%) GHMP kinase N-terminal domain (16.8%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (16.8%)" DMVDGAPSVVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.5%)" "GO:0003729 (24.9%) GO:0003735 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.5%)" "mRNA binding (24.9%) structural constituent of ribosome (24.9%)" "IPR000206 (20.1%) IPR013823 (20.1%) IPR014719 (20.1%)" "Large ribosomal subunit protein bL12 (20.1%) Large ribosomal subunit protein bL12, C-terminal (20.1%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20.1%)" ATGIAGLSIVADSLAAIRDTK Bacteria Bacteria 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006006 (32.6%) GO:0005829 (33.7%) GO:0008861 (33.7%) glucose metabolic process (32.6%) cytosol (33.7%) formate C-acetyltransferase activity (33.7%) "IPR001150 (20.1%) IPR004184 (20.1%) IPR019777 (20.1%)" "Glycine radical domain (20.1%) Pyruvate formate lyase domain (20.1%) Formate C-acetyltransferase glycine radical, conserved site (20.1%)" LADQIIVELNSAHSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" YTDKAQLLDAVKDANAIIIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.95 (90%) 1.1.1.81 (10%)" "phosphoglycerate dehydrogenase (90%) hydroxypyruvate reductase (10%)" GO:0006564 (0.9%) "GO:0051287 (46.3%) GO:0016616 (35.2%) GO:0004617 (10.2%)" L-serine biosynthetic process (0.9%) "NAD binding (46.3%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (35.2%) phosphoglycerate dehydrogenase activity (10.2%)" "IPR006139 (33.3%) IPR006140 (33.3%) IPR036291 (33.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" SADVLTVMPEFTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" VIDPETGEECPVGVQGEMCNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.2.1.- (66.7%) 6.2.1.3 (23.8%) 6.2.1.26 (4.8%)" "Acid--thiol ligases (66.7%) long-chain-fatty-acid--CoA ligase (23.8%) o-succinylbenzoate--CoA ligase (4.8%)" GO:0006631 (47.7%) "GO:0031956 (49.8%) GO:0004467 (2.1%) GO:0008756 (0.3%)" fatty acid metabolic process (47.7%) "medium-chain fatty acid-CoA ligase activity (49.8%) long-chain fatty acid-CoA ligase activity (2.1%) o-succinylbenzoate-CoA ligase activity (0.3%)" "IPR000873 (21.2%) IPR025110 (21.2%) IPR045851 (21.2%)" "AMP-dependent synthetase/ligase domain (21.2%) AMP-binding enzyme, C-terminal domain (21.2%) AMP-binding enzyme, C-terminal domain superfamily (21.2%)" SAAELEHAWEYGCNGSR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.3.1.21 (100%) phosphoribosylglycinamide formyltransferase 2 (100%) GO:0006189 (16.3%) GO:0005829 (16.3%) "GO:0000287 (16.3%) GO:0004644 (16.3%) GO:0005524 (16.3%)" 'de novo' IMP biosynthetic process (16.3%) cytosol (16.3%) "magnesium ion binding (16.3%) phosphoribosylglycinamide formyltransferase activity (16.3%) ATP binding (16.3%)" "IPR003135 (12.5%) IPR005862 (12.5%) IPR011054 (12.5%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.5%) Formate-dependent phosphoribosylglycinamide formyltransferase (12.5%) Rudiment single hybrid motif (12.5%)" GFETSEASVHETVEQIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.- (100%) Hydro-lyases (100%) "GO:0004089 (50%) GO:0008270 (50%)" "carbonate dehydratase activity (50%) zinc ion binding (50%)" "IPR001765 (50%) IPR036874 (50%)" "Carbonic anhydrase (50%) Carbonic anhydrase superfamily (50%)" LHVHDENNECGIGDVVEIR root "GO:0006412 (24.5%) GO:0000028 (0.2%) GO:0002181 (0.1%)" "GO:0022627 (24.6%) GO:0005840 (1%) GO:0005737 (0.1%)" "GO:0003735 (24.6%) GO:0019843 (24.6%) GO:0008270 (0.1%)" "translation (24.5%) ribosomal small subunit assembly (0.2%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (24.6%) ribosome (1%) cytoplasm (0.1%)" "structural constituent of ribosome (24.6%) rRNA binding (24.6%) zinc ion binding (0.1%)" "IPR000266 (25%) IPR012340 (25%) IPR019979 (25%)" "Small ribosomal subunit protein uS17 (25%) Nucleic acid-binding, OB-fold (25%) Small ribosomal subunit protein uS17, conserved site (25%)" DDAAPAAGSTLDKIAK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006865 (32.2%) GO:0015813 (0.4%) GO:0070778 (0.4%)" "GO:0005576 (32.2%) GO:0030288 (32.2%) GO:0016020 (0.4%)" "GO:0016595 (0.4%) GO:0070335 (0.4%)" "amino acid transport (32.2%) L-glutamate transmembrane transport (0.4%) L-aspartate transmembrane transport (0.4%)" "extracellular region (32.2%) outer membrane-bounded periplasmic space (32.2%) membrane (0.4%)" "glutamate binding (0.4%) aspartate binding (0.4%)" "IPR051455 (50.3%) IPR001638 (49.7%)" "Bacterial solute-binding protein 3 (50.3%) Solute-binding protein family 3/N-terminal domain of MltF (49.7%)" AAVTVMLVSGGYPEAYEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0006189 (20%) GO:0009113 (20%)" "GO:0004637 (20%) GO:0005524 (20%) GO:0046872 (20%)" "'de novo' IMP biosynthetic process (20%) purine nucleobase biosynthetic process (20%)" "phosphoribosylamine-glycine ligase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000115 (11.1%) IPR011054 (11.1%) IPR011761 (11.1%)" "Phosphoribosylglycinamide synthetase (11.1%) Rudiment single hybrid motif (11.1%) ATP-grasp fold (11.1%)" GKQVYEVLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.4.-.- (40%) 2.4.1.250 (33.3%) 2.4.1.11 (20%)" "Glycosyltransferases (40%) D-inositol-3-phosphate glycosyltransferase (33.3%) glycogen(starch) synthase (20%)" GO:0009103 (19.4%) "GO:0016757 (48.6%) GO:0016758 (19.4%) GO:0102710 (6.9%)" lipopolysaccharide biosynthetic process (19.4%) "glycosyltransferase activity (48.6%) hexosyltransferase activity (19.4%) D-inositol-3-phosphate glycosyltransferase activity (6.9%)" "IPR001296 (36.9%) IPR028098 (36.3%) IPR050194 (26.8%)" "Glycosyl transferase, family 1 (36.9%) Glycosyltransferase subfamily 4-like, N-terminal domain (36.3%) Glycosyltransferase group 1 (26.8%)" YGHSEVGNFMLDGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" ETEIKNISSVYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50.7%) IPR019734 (49.3%)" "Tetratricopeptide-like helical domain superfamily (50.7%) Tetratricopeptide repeat (49.3%)" QLLLDAMEHPEKYPQLTIR root 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006006 (33.3%) GO:0005829 (33.3%) GO:0008861 (33.3%) glucose metabolic process (33.3%) cytosol (33.3%) formate C-acetyltransferase activity (33.3%) "IPR001150 (20%) IPR004184 (20%) IPR005949 (20%)" "Glycine radical domain (20%) Pyruvate formate lyase domain (20%) Formate acetyltransferase (20%)" AVDLLTDKVEEISLLPYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.2.1.1 (100%) alpha-amylase (100%) GO:0009313 (50%) GO:0004556 (50%) oligosaccharide catabolic process (50%) alpha-amylase activity (50%) "IPR006047 (50%) IPR017853 (50%)" "Glycosyl hydrolase family 13, catalytic domain (50%) Glycoside hydrolase superfamily (50%)" NVISALQSSGQTIHGLLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (1.9%) "GO:0005840 (49.1%) GO:1990904 (47.2%)" GO:0070180 (1.9%) translation (1.9%) "ribosome (49.1%) ribonucleoprotein complex (47.2%)" large ribosomal subunit rRNA binding (1.9%) "IPR001790 (32.9%) IPR043141 (32.9%) IPR047865 (32.9%)" "Large ribosomal subunit protein uL10 (32.9%) Large ribosomal subunit protein uL10-like domain superfamily (32.9%) Large ribosomal subunit protein uL10, bacteria/organella (32.9%)" YYEKLPKPNLIAAQEYVEGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006351 (25.5%) GO:0000428 (23.5%) "GO:0003677 (25.5%) GO:0003899 (25.5%)" DNA-templated transcription (25.5%) DNA-directed RNA polymerase complex (23.5%) "DNA binding (25.5%) DNA-directed RNA polymerase activity (25.5%)" IPR006110 (100%) RNA polymerase, subunit omega/Rpo6/RPB6 (100%) NTFSNAGALDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (30.1%) GO:1902600 (30.1%)" "GO:0005524 (30.1%) GO:0016787 (9.6%)" "ATP metabolic process (30.1%) proton transmembrane transport (30.1%)" "ATP binding (30.1%) hydrolase activity (9.6%)" "IPR000194 (20.1%) IPR004100 (20.1%) IPR022879 (20.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (20.1%) V-type ATP synthase regulatory subunit B/beta (20.1%)" ASGTDEAVVLVPPIR root 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0009409 (8.8%) GO:0010467 (8.6%) GO:0000027 (8.5%)" "GO:0005829 (9.2%) GO:1990904 (9.2%)" "GO:0003924 (9.2%) GO:0005525 (9.2%) GO:0097216 (9%)" "response to cold (8.8%) gene expression (8.6%) ribosomal large subunit assembly (8.5%)" "cytosol (9.2%) ribonucleoprotein complex (9.2%)" "GTPase activity (9.2%) GTP binding (9.2%) guanosine tetraphosphate binding (9%)" "IPR048876 (7.3%) IPR042116 (7.3%) IPR035647 (6.8%)" "TypA/BipA, C-terminal domain (7.3%) GTP-binding protein TypA/BipA, C-terminal (7.3%) EF-G domain III/V-like (6.8%)" MSNICAGIGR Bacteria Bacteria "2.6.1.102 (62.5%) 2.6.1.87 (20.8%) 2.6.1.- (16.7%)" "GDP-perosamine synthase (62.5%) UDP-4-amino-4-deoxy-L-arabinose aminotransferase (20.8%) Transaminases (16.7%)" GO:0000271 (33.2%) GO:0016020 (0.1%) "GO:0030170 (33.2%) GO:0008483 (31.9%) GO:0099620 (1.5%)" polysaccharide biosynthetic process (33.2%) membrane (0.1%) "pyridoxal phosphate binding (33.2%) transaminase activity (31.9%) UDP-4-amino-4-deoxy-L-arabinose aminotransferase (1.5%)" "IPR000653 (25.1%) IPR015424 (25.1%) IPR015421 (24.9%)" "DegT/DnrJ/EryC1/StrS aminotransferase (25.1%) Pyridoxal phosphate-dependent transferase (25.1%) Pyridoxal phosphate-dependent transferase, major domain (24.9%)" DGLNREESCGGHFR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (11.8%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (11.8%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" YRLGETGDAIAK root "GO:0005886 (49.2%) GO:0016020 (0.4%) GO:0060187 (0.4%)" "GO:0043022 (49.6%) GO:0043024 (0.4%)" "plasma membrane (49.2%) membrane (0.4%) cell pole (0.4%)" "ribosome binding (49.6%) ribosomal small subunit binding (0.4%)" "IPR010279 (33.3%) IPR043604 (33.1%) IPR043605 (33.1%)" "Inner membrane protein YqjD/ElaB (33.3%) DUF883, N-terminal domain (33.1%) DUF883, C-terminal domain (33.1%)" IMGILNTDDMQIVFSDTPGVVKPNYK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0000028 (14.3%) "GO:0005829 (14.3%) GO:0005886 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%) GO:0043024 (14.3%)" ribosomal small subunit assembly (14.3%) "cytosol (14.3%) plasma membrane (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%) ribosomal small subunit binding (14.3%)" "IPR004044 (12.5%) IPR005225 (12.5%) IPR005662 (12.5%)" "K Homology domain, type 2 (12.5%) Small GTP-binding domain (12.5%) GTPase Era-like (12.5%)" ISHGQVDLSELGPNADELLSK root 2.6.1.16 (100%) glutamine--fructose-6-phosphate transaminase (isomerizing) (100%) "GO:0006002 (12.6%) GO:0006487 (12.6%) GO:0006047 (12.6%)" GO:0005829 (12.6%) "GO:0004360 (12.6%) GO:0097367 (12.6%) GO:0008483 (0.1%)" "fructose 6-phosphate metabolic process (12.6%) protein N-linked glycosylation (12.6%) UDP-N-acetylglucosamine metabolic process (12.6%)" cytosol (12.6%) "glutamine-fructose-6-phosphate transaminase (isomerizing) activity (12.6%) carbohydrate derivative binding (12.6%) transaminase activity (0.1%)" "IPR046348 (12.7%) IPR001347 (12.7%) IPR035466 (12.7%)" "SIS domain superfamily (12.7%) SIS domain (12.7%) GlmS/AgaS, SIS domain 1 (12.7%)" ANHQTAEFINNVGVYNFLNGDVQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" STLIHQGEKAETLYYIVK root "GO:0045893 (16.4%) GO:0006351 (0%) GO:0045013 (0%)" "GO:0005829 (16.9%) GO:0032993 (16.4%)" "GO:0003700 (17%) GO:0030552 (16.5%) GO:0043565 (16.4%)" "positive regulation of DNA-templated transcription (16.4%) DNA-templated transcription (0%) carbon catabolite repression of transcription (0%)" "cytosol (16.9%) protein-DNA complex (16.4%)" "DNA-binding transcription factor activity (17%) cAMP binding (16.5%) sequence-specific DNA binding (16.4%)" "IPR000595 (11.3%) IPR014710 (11.3%) IPR018488 (11.3%)" "Cyclic nucleotide-binding domain (11.3%) RmlC-like jelly roll fold (11.3%) Cyclic nucleotide-binding, conserved site (11.3%)" DAEANAEADRKFEELVQTR root "GO:0042026 (0.2%) GO:0051085 (0.2%) GO:0006260 (0.1%)" "GO:0005829 (0.2%) GO:0005737 (0.1%) GO:0005886 (0.1%)" "GO:0005524 (26.3%) GO:0140662 (26.3%) GO:0051082 (24.1%)" "protein refolding (0.2%) obsolete chaperone cofactor-dependent protein refolding (0.2%) DNA replication (0.1%)" "cytosol (0.2%) cytoplasm (0.1%) plasma membrane (0.1%)" "ATP binding (26.3%) ATP-dependent protein folding chaperone (26.3%) unfolded protein binding (24.1%)" "IPR013126 (17.3%) IPR029048 (17.2%) IPR029047 (16.9%)" "Heat shock protein 70 family (17.3%) Heat shock protein 70kD, C-terminal domain superfamily (17.2%) Heat shock protein 70kD, peptide-binding domain superfamily (16.9%)" AANQILTDEVADLILLGNPEEINAAAAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0008959 (61.1%) GO:0016407 (38.9%)" "phosphate acetyltransferase activity (61.1%) acetyltransferase activity (38.9%)" "IPR002505 (16.7%) IPR004614 (16.7%) IPR012147 (16.7%)" "Phosphate acetyl/butaryl transferase (16.7%) Phosphate acetyltransferase (16.7%) Phosphate acetyl/butyryltransferase (16.7%)" LMPPEEQQLLFGNTAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" GO:0005737 (16.7%) "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16.7%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" cytoplasm (16.7%) "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16.7%)" "IPR002226 (12.5%) IPR010582 (12.5%) IPR011614 (12.5%)" "Catalase haem-binding site (12.5%) Catalase immune-responsive domain (12.5%) Catalase core domain (12.5%)" ILLSSLEGFAINTIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) "GO:0000428 (16.8%) GO:0005737 (16.8%)" "GO:0003899 (16.8%) GO:0046983 (16.8%) GO:0003677 (15.9%)" DNA-templated transcription (16.8%) "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.8%)" "DNA-directed RNA polymerase activity (16.8%) protein dimerization activity (16.8%) DNA binding (15.9%)" "IPR011262 (17%) IPR011263 (17%) IPR036603 (17%)" "DNA-directed RNA polymerase, insert domain (17%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (17%) RNA polymerase, RBP11-like subunit (17%)" TTVSHQQALLECLK Bacteria Bacteria "GO:0010038 (33%) GO:0046688 (0.3%)" "GO:0005737 (32.3%) GO:0016020 (0.3%) GO:0032991 (0.3%)" "GO:0005507 (33.3%) GO:0046872 (0.3%)" "response to metal ion (33%) response to copper ion (0.3%)" "cytoplasm (32.3%) membrane (0.3%) protein-containing complex (0.3%)" "copper ion binding (33.3%) metal ion binding (0.3%)" "IPR004323 (25.2%) IPR011322 (25.2%) IPR015867 (25.2%)" "Divalent ion tolerance protein, CutA (25.2%) Nitrogen regulatory PII-like, alpha/beta (25.2%) Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal (25.2%)" EQFKNNPPEVPTVNNHVGSYRR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.1%) IPR006101 (7.1%) IPR006102 (7.1%)" "Beta galactosidase small chain/ domain 5 (7.1%) Glycoside hydrolase, family 2 (7.1%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.1%)" ALTSGLINQTYLVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.7.1.162 (50%) 3.1.6.- (50%)" "N-acetylhexosamine 1-kinase (50%) Sulfuric ester hydrolases (50%)" "GO:0016740 (84.6%) GO:0016301 (7.7%) GO:0016787 (7.7%)" "transferase activity (84.6%) kinase activity (7.7%) hydrolase activity (7.7%)" "IPR002575 (33.3%) IPR011009 (33.3%) IPR050249 (33.3%)" "Aminoglycoside phosphotransferase (33.3%) Protein kinase-like domain superfamily (33.3%) Pseudomonas-type Homoserine Kinase (33.3%)" QCGLSGSPTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) "GO:0009055 (97.2%) GO:0016491 (2.1%) GO:0003677 (0.3%)" "electron transfer activity (97.2%) oxidoreductase activity (2.1%) DNA binding (0.3%)" "IPR014729 (20.8%) IPR012255 (20.4%) IPR014730 (20.3%)" "Rossmann-like alpha/beta/alpha sandwich fold (20.8%) Electron transfer flavoprotein, beta subunit (20.4%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (20.3%)" YIGSEENWDKAEQAIIEACEEK SINVANAVIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" AVSSAEELYAACNIVSLHIPATAETK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.1.1.95 (66.7%) 1.1.1.81 (33.3%)" "phosphoglycerate dehydrogenase (66.7%) hydroxypyruvate reductase (33.3%)" "GO:0051287 (50%) GO:0016616 (34.6%) GO:0004617 (11.5%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (34.6%) phosphoglycerate dehydrogenase activity (11.5%)" "IPR006139 (33.3%) IPR006140 (33.3%) IPR036291 (33.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" SLGQFNLDGINPAPR root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0006260 (0.1%) GO:0042026 (0.1%) GO:0051085 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0005524 (25.5%) GO:0140662 (25.5%) GO:0051082 (24.2%)" "DNA replication (0.1%) protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytosol (0.1%) cytoplasm (0%) plasma membrane (0%)" "ATP binding (25.5%) ATP-dependent protein folding chaperone (25.5%) unfolded protein binding (24.2%)" "IPR013126 (17%) IPR029047 (17%) IPR029048 (16.7%)" "Heat shock protein 70 family (17%) Heat shock protein 70kD, peptide-binding domain superfamily (17%) Heat shock protein 70kD, C-terminal domain superfamily (16.7%)" MNLYIGNLNYNVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0003723 (100%) RNA binding (100%) "IPR000504 (25%) IPR012677 (25%) IPR035979 (25%)" "RNA recognition motif domain (25%) Nucleotide-binding alpha-beta plait domain superfamily (25%) RNA-binding domain superfamily (25%)" FFDEAINLETDNAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) LGNFLFDTQKQTLAIGDK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" MGMEQTIGSPSILTMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006508 (33.3%) GO:0005829 (33.3%) GO:0008237 (33.3%) proteolysis (33.3%) cytosol (33.3%) metallopeptidase activity (33.3%) "IPR002510 (16.7%) IPR035068 (16.7%) IPR036059 (16.7%)" "Metalloprotease TldD/E, N-terminal domain (16.7%) Metalloprotease TldD/PmbA, N-terminal (16.7%) Metalloprotease TldD/PmbA superfamily (16.7%)" NSINYELVNKMPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.1.1.95 (66.7%) 1.1.1.81 (33.3%)" "phosphoglycerate dehydrogenase (66.7%) hydroxypyruvate reductase (33.3%)" "GO:0051287 (50%) GO:0016616 (40%) GO:0004617 (7.5%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (40%) phosphoglycerate dehydrogenase activity (7.5%)" "IPR006139 (33.3%) IPR006140 (33.3%) IPR036291 (33.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" TQLLPEFANVAFNLKDPKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0003755 (100%) peptidyl-prolyl cis-trans isomerase activity (100%) "IPR000297 (20%) IPR023058 (20%) IPR027304 (20%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (20%) Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site (20%) Trigger factor/SurA domain superfamily (20%)" SHDALTAVTSLSVDKTSGEK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006412 (32.7%) GO:0000027 (0.1%) GO:0000302 (0.1%)" "GO:0015934 (32.7%) GO:0005840 (1.1%) GO:0022625 (0.2%)" GO:0003735 (32.8%) "translation (32.7%) ribosomal large subunit assembly (0.1%) response to reactive oxygen species (0.1%)" "large ribosomal subunit (32.7%) ribosome (1.1%) cytosolic large ribosomal subunit (0.2%)" structural constituent of ribosome (32.8%) "IPR002677 (33.3%) IPR011332 (33.3%) IPR044957 (33.3%)" "Large ribosomal subunit protein bL32 (33.3%) Zinc-binding ribosomal protein (33.3%) Large ribosomal subunit protein bL32, bacteria (33.3%)" KAIAGMMQLAPSITAFGNTNPTSYFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" SPLSVYKELIR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.8%) GO:0006044 (32.8%)" "GO:0004342 (32.8%) GO:0016853 (1.6%)" "carbohydrate metabolic process (32.8%) N-acetylglucosamine metabolic process (32.8%)" "glucosamine-6-phosphate deaminase activity (32.8%) isomerase activity (1.6%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" YGNIGKNHKEEGYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) ALTKAEMSEYLFDKLGLSKR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006310 (14.3%) GO:0006417 (14.3%) GO:0006355 (14.2%)" "GO:0005829 (14.3%) GO:0032993 (0.1%) GO:1990177 (0%)" "GO:0030527 (14.3%) GO:0003677 (14.2%) GO:0000976 (0.1%)" "DNA recombination (14.3%) regulation of translation (14.3%) regulation of DNA-templated transcription (14.2%)" "cytosol (14.3%) protein-DNA complex (0.1%) IHF-DNA complex (0%)" "structural constituent of chromatin (14.3%) DNA binding (14.2%) transcription cis-regulatory region binding (0.1%)" "IPR000119 (25%) IPR005684 (25%) IPR010992 (25%)" "Histone-like DNA-binding protein (25%) Integration host factor, alpha subunit (25%) Integration host factor (IHF)-like DNA-binding domain superfamily (25%)" MTANLQPGEYDMTCGLLTNPK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006979 (0.4%) GO:0009411 (0.4%) GO:0009636 (0.4%)" "GO:0042597 (97.8%) GO:0030288 (0.4%)" "response to oxidative stress (0.4%) response to UV (0.4%) response to toxic substance (0.4%)" "periplasmic space (97.8%) outer membrane-bounded periplasmic space (0.4%)" "IPR028096 (14.6%) IPR050894 (14.6%) IPR008972 (14.5%)" "EfeO-type cupredoxin-like domain (14.6%) Iron uptake system component EfeM/EfeO (14.6%) Cupredoxin (14.5%)" YEFNNDYKQEYEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.8%) GO:0044210 (11.8%)" "GO:0005829 (11.8%) GO:0097268 (11%)" "GO:0003883 (11.8%) GO:0005524 (11.8%) GO:0042802 (11.8%)" "pyrimidine nucleobase biosynthetic process (11.8%) 'de novo' CTP biosynthetic process (11.8%)" "cytosol (11.8%) cytoophidium (11%)" "CTP synthase activity (11.8%) ATP binding (11.8%) identical protein binding (11.8%)" "IPR004468 (17.2%) IPR017926 (17.2%) IPR029062 (17.2%)" "CTP synthase (17.2%) Glutamine amidotransferase (17.2%) Class I glutamine amidotransferase-like (17.2%)" KQSQEEMGHAYAMADYIIKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.4%) GO:0006879 (14.4%)" "GO:0005829 (14.4%) GO:0005737 (0.5%)" "GO:0004322 (14.4%) GO:0008198 (14.4%) GO:0008199 (14.4%)" "iron ion transport (14.4%) intracellular iron ion homeostasis (14.4%)" "cytosol (14.4%) cytoplasm (0.5%)" "ferroxidase activity (14.4%) ferrous iron binding (14.4%) ferric iron binding (14.4%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" YQQHGMAPLTQEQKPVAK root 3.4.24.- (100%) Metalloendopeptidases (100%) "GO:0000917 (13.6%) GO:0043093 (13.6%) GO:0051258 (13.6%)" "GO:0005737 (14.3%) GO:0032153 (14.3%) GO:0005886 (0.1%)" "GO:0003924 (14.3%) GO:0005525 (14.3%) GO:0016787 (0.1%)" "division septum assembly (13.6%) FtsZ-dependent cytokinesis (13.6%) protein polymerization (13.6%)" "cytoplasm (14.3%) cell division site (14.3%) plasma membrane (0.1%)" "GTPase activity (14.3%) GTP binding (14.3%) hydrolase activity (0.1%)" "IPR008280 (11.3%) IPR018316 (11.3%) IPR024757 (11.3%)" "Tubulin/FtsZ, C-terminal (11.3%) Tubulin/FtsZ, 2-layer sandwich domain (11.3%) Cell division protein FtsZ, C-terminal (11.3%)" AMELHQALVEAAAENDDTLMEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" QSILQALAEQSR root "2.7.7.6 (71.4%) 1.2.1.11 (14.3%) 2.7.7.8 (14.3%)" "DNA-directed RNA polymerase (71.4%) aspartate-semialdehyde dehydrogenase (14.3%) polyribonucleotide nucleotidyltransferase (14.3%)" "GO:0006352 (33.3%) GO:0005975 (0%) GO:0006355 (0%)" "GO:0000428 (0.1%) GO:0005829 (0%) GO:1903865 (0%)" "GO:0016987 (33.2%) GO:0003677 (32.9%) GO:0003700 (0.1%)" "DNA-templated transcription initiation (33.3%) carbohydrate metabolic process (0%) regulation of DNA-templated transcription (0%)" "DNA-directed RNA polymerase complex (0.1%) cytosol (0%) sigma factor antagonist complex (0%)" "sigma factor activity (33.2%) DNA binding (32.9%) DNA-binding transcription factor activity (0.1%)" "IPR050239 (10%) IPR014284 (10%) IPR007624 (10%)" "Sigma-70 factor family, RNA polymerase initiation factors (10%) RNA polymerase sigma-70-like domain (10%) RNA polymerase sigma-70 region 3 (10%)" NHGGFYLGSIGGPAAILAQNNIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" SNHVTLFVDTISK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (24.4%) "GO:0022625 (21.8%) GO:0005840 (2.6%) GO:1990904 (2.6%)" "GO:0003735 (24.4%) GO:0019843 (24.4%)" translation (24.4%) "cytosolic large ribosomal subunit (21.8%) ribosome (2.6%) ribonucleoprotein complex (2.6%)" "structural constituent of ribosome (24.4%) rRNA binding (24.4%)" "IPR001063 (26.4%) IPR036394 (26.4%) IPR005727 (23.6%)" "Large ribosomal subunit protein uL22 (26.4%) Ribosomal protein uL22 superfamily (26.4%) Large ribosomal subunit protein uL22, bacterial/chloroplast-type (23.6%)" MNAIIIDDHPLAIAAIR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0000160 (34%) GO:0006355 (29.5%)" "GO:0005737 (1%) GO:0016020 (0.7%) GO:0005829 (0.3%)" "GO:0003677 (34%) GO:0043565 (0.3%)" "phosphorelay signal transduction system (34%) regulation of DNA-templated transcription (29.5%)" "cytoplasm (1%) membrane (0.7%) cytosol (0.3%)" "DNA binding (34%) sequence-specific DNA binding (0.3%)" "IPR001789 (18.1%) IPR011006 (18.1%) IPR051015 (17.4%)" "Signal transduction response regulator, receiver domain (18.1%) CheY-like superfamily (18.1%) DNA-binding transcriptional activator EvgA-like (17.4%)" SVAVTSTMGPGVK Bacillota Bacteria Bacillati Bacillota "GO:0006412 (16.7%) GO:0006417 (16.7%)" GO:0015934 (16.7%) "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" "translation (16.7%) regulation of translation (16.7%)" large ribosomal subunit (16.7%) "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR002143 (16.7%) IPR005878 (16.7%) IPR016095 (16.7%)" "Large ribosomal subunit protein uL1 (16.7%) Large ribosomal subunit protein uL1, bacteria (16.7%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" SKGFTLYLEPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (27.3%) GO:0003863 (6.1%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (27.3%) branched-chain 2-oxo acid dehydrogenase activity (6.1%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" INFADKSVTENTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.3%) GO:0005829 (17.3%) "GO:0004612 (17.3%) GO:0005524 (17.3%) GO:0046872 (17.3%)" gluconeogenesis (17.3%) cytosol (17.3%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.3%) ATP binding (17.3%) metal ion binding (17.3%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" GQMLEHQGIVATER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.6.2.1 (100%) DNA topoisomerase (100%) GO:0006265 (25%) "GO:0003677 (25%) GO:0003917 (25%) GO:0046872 (25%)" DNA topological change (25%) "DNA binding (25%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25%) metal ion binding (25%)" "IPR000380 (7.1%) IPR003601 (7.1%) IPR003602 (7.1%)" "DNA topoisomerase, type IA (7.1%) DNA topoisomerase, type IA, domain 2 (7.1%) DNA topoisomerase, type IA, DNA-binding domain (7.1%)" ATGAIVSGPIPLPTHKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20%) "GO:0005840 (19.9%) GO:1990904 (19.9%) GO:0015935 (0.1%)" "GO:0003735 (20%) GO:0000049 (19.4%) GO:0003723 (0.7%)" translation (20%) "ribosome (19.9%) ribonucleoprotein complex (19.9%) small ribosomal subunit (0.1%)" "structural constituent of ribosome (20%) tRNA binding (19.4%) RNA binding (0.7%)" "IPR001848 (25%) IPR027486 (25%) IPR036838 (25%)" "Small ribosomal subunit protein uS10 (25%) Small ribosomal subunit protein uS10 domain (25%) Small ribosomal subunit protein uS10 domain superfamily (25%)" GMGVGAPNGNYYTGTIEFAPNLPWK VATYDLKPEMSAFEVKDKLVDAINTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" FNIGEKLEDVRVER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043043 (33%) "GO:0005829 (32%) GO:0005737 (1.5%)" GO:0003746 (33.6%) peptide biosynthetic process (33%) "cytosol (32%) cytoplasm (1.5%)" translation elongation factor activity (33.6%) "IPR020599 (11.2%) IPR001059 (11.1%) IPR008991 (11.1%)" "Translation elongation factor P/YeiP (11.2%) Translation elongation factor P/YeiP, central (11.1%) Translation protein SH3-like domain superfamily (11.1%)" VYSGYALGMGIER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) "GO:0006432 (16.5%) GO:0043039 (0.2%)" GO:0005737 (16.5%) "GO:0000049 (16.7%) GO:0004826 (16.7%) GO:0005524 (16.7%)" "phenylalanyl-tRNA aminoacylation (16.5%) tRNA aminoacylation (0.2%)" cytoplasm (16.5%) "tRNA binding (16.7%) phenylalanine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002319 (14.4%) IPR045864 (14.4%) IPR004188 (14.2%)" "Phenylalanyl-tRNA synthetase (14.4%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.4%) Phenylalanine-tRNA ligase, class II, N-terminal (14.2%)" QILEIISQNAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0043200 (31.6%) GO:0006355 (0.3%)" GO:0005829 (31.6%) "GO:0043565 (36.2%) GO:0003700 (0.3%)" "response to amino acid (31.6%) regulation of DNA-templated transcription (0.3%)" cytosol (31.6%) "sequence-specific DNA binding (36.2%) DNA-binding transcription factor activity (0.3%)" "IPR000485 (16.4%) IPR036388 (16.4%) IPR036390 (16.4%)" "AsnC-type HTH domain (16.4%) Winged helix-like DNA-binding domain superfamily (16.4%) Winged helix DNA-binding domain superfamily (16.4%)" LADDLIGATSDTSCLVGYSSAMRR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.7%) GO:0006531 (24.7%)" GO:0005829 (24.7%) "GO:0008797 (24.7%) GO:0016853 (1.3%)" "tricarboxylic acid cycle (24.7%) aspartate metabolic process (24.7%)" cytosol (24.7%) "aspartate ammonia-lyase activity (24.7%) isomerase activity (1.3%)" "IPR000362 (12.6%) IPR008948 (12.6%) IPR018951 (12.6%)" "Fumarate lyase family (12.6%) L-Aspartase-like (12.6%) Fumarase C, C-terminal (12.6%)" AMLEDIAVLTGGIVISEEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17%) GO:0005737 (16.3%) "GO:0005524 (17%) GO:0140662 (17%) GO:0016853 (16.3%)" protein refolding (17%) cytoplasm (16.3%) "ATP binding (17%) ATP-dependent protein folding chaperone (17%) isomerase activity (16.3%)" "IPR001844 (17.2%) IPR002423 (17.2%) IPR018370 (16.4%)" "Chaperonin Cpn60/GroEL (17.2%) Chaperonin Cpn60/GroEL/TCP-1 family (17.2%) Chaperonin Cpn60, conserved site (16.4%)" GIEGSSLDVPENIVHSGK root "GO:0006974 (0.4%) GO:0042542 (0.4%)" GO:0005829 (48.7%) "GO:0000166 (48.7%) GO:0000049 (0.4%) GO:0005524 (0.4%)" "DNA damage response (0.4%) response to hydrogen peroxide (0.4%)" cytosol (48.7%) "nucleotide binding (48.7%) tRNA binding (0.4%) ATP binding (0.4%)" "IPR007551 (25.3%) IPR035570 (25.3%) IPR036183 (25.3%)" "Nucleotide-binding protein YajQ/Smlt4090-like (25.3%) UPF0234, N-terminal (25.3%) YajQ-like superfamily (25.3%)" AAQEALENGTGKGNDFLGWLHLPSSISK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" MTKADIVSEISK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0030261 (24.1%) GO:0005829 (25.3%) "GO:0003677 (25.3%) GO:0030527 (25.3%)" chromosome condensation (24.1%) cytosol (25.3%) "DNA binding (25.3%) structural constituent of chromatin (25.3%)" "IPR000119 (50%) IPR010992 (50%)" "Histone-like DNA-binding protein (50%) Integration host factor (IHF)-like DNA-binding domain superfamily (50%)" SGVLGVSGVSSDMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (18%) GO:0006085 (15.5%)" GO:0005737 (15.5%) "GO:0008776 (18%) GO:0005524 (17.6%) GO:0000287 (15.5%)" "acetate metabolic process (18%) acetyl-CoA biosynthetic process (15.5%)" cytoplasm (15.5%) "acetate kinase activity (18%) ATP binding (17.6%) magnesium ion binding (15.5%)" "IPR000890 (25.1%) IPR004372 (25.1%) IPR043129 (25.1%)" "Aliphatic acid kinase, short-chain (25.1%) Acetate/propionate kinase (25.1%) ATPase, nucleotide binding domain (25.1%)" RFGDAFDEAQFR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (13.1%) GO:0015966 (11.8%) GO:0044281 (0.8%)" "GO:0005737 (13.1%) GO:0070062 (11.8%) GO:1990742 (11.8%)" "GO:0004820 (13.1%) GO:0005524 (12.7%) GO:0004081 (11.8%)" "glycyl-tRNA aminoacylation (13.1%) diadenosine tetraphosphate biosynthetic process (11.8%) small molecule metabolic process (0.8%)" "cytoplasm (13.1%) extracellular exosome (11.8%) microvesicle (11.8%)" "glycine-tRNA ligase activity (13.1%) ATP binding (12.7%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (11.8%)" "IPR027031 (11.4%) IPR045864 (11.4%) IPR002314 (11.1%)" "Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 (11.4%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.4%) Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%)" VDILDGKPSADKFYVER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" VAPKGDIMAPTTVK Paraclostridium Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Paraclostridium "1.2.7.1 (77.8%) 1.2.7.- (22.2%)" "pyruvate synthase (77.8%) With an iron-sulfur protein as acceptor (22.2%)" "GO:0006979 (16.7%) GO:0022900 (16.7%)" "GO:0005506 (16.7%) GO:0030976 (16.7%) GO:0051539 (16.7%)" "response to oxidative stress (16.7%) electron transport chain (16.7%)" "iron ion binding (16.7%) thiamine pyrophosphate binding (16.7%) 4 iron, 4 sulfur cluster binding (16.7%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" FCTTEGIDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.11.1.24 (88.6%) 1.11.1.- (11.4%)" "thioredoxin-dependent peroxiredoxin (88.6%) Peroxidases (11.4%)" GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" GGESVNDQGAEDQR root "GO:0034605 (17%) GO:0042026 (15.9%) GO:0006508 (0.2%)" "GO:0005829 (15.5%) GO:0005737 (1.5%) GO:0005759 (0%)" "GO:0005524 (17%) GO:0016887 (17%) GO:0042802 (15.5%)" "cellular response to heat (17%) protein refolding (15.9%) proteolysis (0.2%)" "cytosol (15.5%) cytoplasm (1.5%) mitochondrial matrix (0%)" "ATP binding (17%) ATP hydrolysis activity (17%) identical protein binding (15.5%)" "IPR004176 (8.6%) IPR027417 (8.6%) IPR050130 (8.6%)" "Clp, repeat (R) N-terminal domain (8.6%) P-loop containing nucleoside triphosphate hydrolase (8.6%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%)" TVIVEQQYNPDIMDAAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0044718 (29.4%) GO:0009279 (41.2%) GO:0015344 (29.4%) siderophore transmembrane transport (29.4%) cell outer membrane (41.2%) siderophore uptake transmembrane transporter activity (29.4%) "IPR036942 (57.9%) IPR039426 (42.1%)" "TonB-dependent receptor-like, beta-barrel domain superfamily (57.9%) TonB-dependent receptor-like (42.1%)" ALMSMEGVDFSPLFDSLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" VVPAMAGWQFYNHNGLMDIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016787 (100%) hydrolase activity (100%) "IPR001466 (20%) IPR005180 (20%) IPR012338 (20%)" "Beta-lactamase-related (20%) Domain of unknown function DUF302 (20%) Beta-lactamase/transpeptidase-like (20%)" ELNPDVNSLGSRG Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IGMTSVFSAEGK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.5%)" "GO:0003735 (24.9%) GO:0019843 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.5%)" "structural constituent of ribosome (24.9%) rRNA binding (24.9%)" "IPR009000 (25.8%) IPR000597 (25.5%) IPR019927 (25.5%)" "Translation protein, beta-barrel domain superfamily (25.8%) Large ribosomal subunit protein uL3 (25.5%) Large ribosomal subunit protein uL3, bacteria/organella (25.5%)" IAGEFLPCVFHVSAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (73.2%) 1.2.7.- (24.4%) 1.2.1.51 (2.4%)" "pyruvate synthase (73.2%) With an iron-sulfur protein as acceptor (24.4%) pyruvate dehydrogenase (NADP(+)) (2.4%)" "GO:0006979 (14.9%) GO:0022900 (14.7%) GO:0044281 (11.6%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.3%)" "response to oxidative stress (14.9%) electron transport chain (14.7%) small molecule metabolic process (11.6%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.3%)" "IPR002880 (7.8%) IPR029061 (7.8%) IPR050722 (7.8%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.8%) Thiamin diphosphate-binding fold (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%)" NIKDFEEGRPLVNEVTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.28 (100%) D-lactate dehydrogenase (100%) "GO:0008720 (47.4%) GO:0051287 (47.4%) GO:0016787 (5.3%)" "D-lactate dehydrogenase (NAD+) activity (47.4%) NAD binding (47.4%) hydrolase activity (5.3%)" "IPR006139 (25%) IPR006140 (25%) IPR029753 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (25%)" KIVGIVETNWPDEAR Pseudomonadati Bacteria Pseudomonadati 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" NAYGEIDNLQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.3%) GO:0009090 (17.3%) GO:0009088 (13.5%)" GO:0005829 (17.3%) "GO:0004072 (17.3%) GO:0005524 (17.3%) GO:0016301 (0.2%)" "lysine biosynthetic process via diaminopimelate (17.3%) homoserine biosynthetic process (17.3%) threonine biosynthetic process (13.5%)" cytosol (17.3%) "aspartate kinase activity (17.3%) ATP binding (17.3%) kinase activity (0.2%)" "IPR001048 (13.2%) IPR001341 (13.2%) IPR036393 (13.2%)" "Aspartate/glutamate/uridylate kinase (13.2%) Aspartate kinase (13.2%) Acetylglutamate kinase-like superfamily (13.2%)" MGGHATELIASGQFGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (8.4%) GO:0030388 (8.4%) GO:0061621 (8.4%)" "GO:0005945 (8.4%) GO:0016020 (0.8%)" "GO:0003872 (8.4%) GO:0005524 (8.4%) GO:0016208 (8.4%)" "fructose 6-phosphate metabolic process (8.4%) fructose 1,6-bisphosphate metabolic process (8.4%) canonical glycolysis (8.4%)" "6-phosphofructokinase complex (8.4%) membrane (0.8%)" "6-phosphofructokinase activity (8.4%) ATP binding (8.4%) AMP binding (8.4%)" "IPR000023 (21%) IPR022953 (21%) IPR035966 (21%)" "Phosphofructokinase domain (21%) ATP-dependent 6-phosphofructokinase (21%) Phosphofructokinase superfamily (21%)" IYREGVEKGNEEAQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0033178 (48.3%) "GO:0046961 (48.3%) GO:0016787 (3.3%)" proton-transporting two-sector ATPase complex, catalytic domain (48.3%) "proton-transporting ATPase activity, rotational mechanism (48.3%) hydrolase activity (3.3%)" IPR002842 (100%) V-type ATPase subunit E (100%) GFGDLSENSEYEAAKDEQSTLENR Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus "GO:0006354 (19.5%) GO:0032784 (19.5%)" "GO:0003746 (21.8%) GO:0003677 (19.5%) GO:0070063 (19.5%)" "DNA-templated transcription elongation (19.5%) regulation of DNA-templated transcription elongation (19.5%)" "translation elongation factor activity (21.8%) DNA binding (19.5%) RNA polymerase binding (19.5%)" "IPR001437 (12.5%) IPR006359 (12.5%) IPR018151 (12.5%)" "Transcription elongation factor, GreA/GreB, C-terminal (12.5%) Transcription elongation factor GreA (12.5%) Transcription elongation factor, GreA/GreB, conserved site (12.5%)" AAEELSTVKEPGFYALVPDDFPGVTPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "7.2.1.1 (94.7%) 1.6.5.- (5.3%)" "NADH:ubiquinone reductase (Na(+)-transporting) (94.7%) With a quinone or similar compound as acceptor (5.3%)" GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (25%) IPR022615 (25%) IPR056147 (25%)" "Na(+)-translocating NADH-quinone reductase subunit A (25%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (25%) NqrA, N-terminal barrel-sandwich hybrid domain (25%)" LVNEAFIHYMEEEYLVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.2.14 (100%) amidophosphoribosyltransferase (100%) "GO:0016757 (66.7%) GO:0004044 (33.3%)" "glycosyltransferase activity (66.7%) amidophosphoribosyltransferase activity (33.3%)" "IPR017932 (33.3%) IPR029055 (33.3%) IPR029057 (33.3%)" "Glutamine amidotransferase type 2 domain (33.3%) Nucleophile aminohydrolases, N-terminal (33.3%) Phosphoribosyltransferase-like (33.3%)" NMWDGATATADEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR008969 (33.3%) IPR024620 (33.3%) IPR053968 (33.3%)" "Carboxypeptidase-like, regulatory domain superfamily (33.3%) Domain of unknown function DUF3869 (33.3%) BF9343_1606-like, C-terminal (33.3%)" VVMTWAPHPK Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.1.3.11 (92.5%) 2.1.3.9 (7.5%)" "N-succinylornithine carbamoyltransferase (92.5%) N-acetylornithine carbamoyltransferase (7.5%)" "GO:0019240 (25%) GO:0042450 (25%)" "GO:0004585 (25%) GO:0016597 (25%)" "citrulline biosynthetic process (25%) L-arginine biosynthetic process via ornithine (25%)" "ornithine carbamoyltransferase activity (25%) amino acid binding (25%)" "IPR006132 (20.7%) IPR036901 (20.7%) IPR006130 (19.6%)" "Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20.7%) Aspartate/ornithine carbamoyltransferase superfamily (20.7%) Aspartate/ornithine carbamoyltransferase (19.6%)" LTGMAFRVPTSDVSVVDLTVVLEK root "1.2.1.- (94.6%) 1.2.1.12 (5.4%)" "With NAD(+) or NADP(+) as acceptor (94.6%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (5.4%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" "GO:0005737 (16.2%) GO:0005829 (0.5%)" "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (11.4%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" "cytoplasm (16.2%) cytosol (0.5%)" "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (11.4%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" MIGQGMHGFVGNNDIHFDNLDEELANPTDLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (14%) GO:0006526 (14%) GO:0006541 (14%)" GO:0005737 (14%) "GO:0004088 (14%) GO:0005524 (14%) GO:0046872 (14%)" "pyrimidine nucleotide biosynthetic process (14%) L-arginine biosynthetic process (14%) glutamine metabolic process (14%)" cytoplasm (14%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14%) ATP binding (14%) metal ion binding (14%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" QAIDGDTAQVGPQVAEK Pseudomonadati Bacteria Pseudomonadati 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) "GO:0009055 (96.6%) GO:0016491 (2.8%) GO:0003677 (0.3%)" "electron transfer activity (96.6%) oxidoreductase activity (2.8%) DNA binding (0.3%)" "IPR012255 (21.8%) IPR014729 (21.8%) IPR014730 (21.8%)" "Electron transfer flavoprotein, beta subunit (21.8%) Rossmann-like alpha/beta/alpha sandwich fold (21.8%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (21.8%)" DILPTSNSVFNSAVVPFKGGYAGVFR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "2.4.1.319 (50%) 2.4.1.320 (50%)" "beta-1,4-mannooligosaccharide phosphorylase (50%) 1,4-beta-mannosyl-N-acetylglucosamine phosphorylase (50%)" "GO:0016757 (66.7%) GO:0016798 (29.2%) GO:0016787 (4.2%)" "glycosyltransferase activity (66.7%) hydrolase activity, acting on glycosyl bonds (29.2%) hydrolase activity (4.2%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" VITGFAGVSLQPNSGAAGEYAGLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.6%) "GO:0005829 (16.6%) GO:0005960 (16.6%)" "GO:0004375 (16.6%) GO:0016594 (16.6%) GO:0030170 (16.6%)" glycine decarboxylation via glycine cleavage system (16.6%) "cytosol (16.6%) glycine cleavage complex (16.6%)" "glycine dehydrogenase (decarboxylating) activity (16.6%) glycine binding (16.6%) pyridoxal phosphate binding (16.6%)" "IPR015421 (14.3%) IPR015422 (14.3%) IPR015424 (14.3%)" "Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%) Pyridoxal phosphate-dependent transferase (14.3%)" VMAGCLDSNASR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.-.-.- (100%) Ligases (100%) GO:0015977 (22.5%) GO:0009317 (22.5%) "GO:0004658 (23.3%) GO:0003989 (22.5%) GO:0016740 (7.5%)" carbon fixation (22.5%) acetyl-CoA carboxylase complex (22.5%) "propionyl-CoA carboxylase activity (23.3%) acetyl-CoA carboxylase activity (22.5%) transferase activity (7.5%)" "IPR011763 (20.1%) IPR029045 (20.1%) IPR034733 (20.1%)" "Acetyl-coenzyme A carboxyltransferase, C-terminal (20.1%) ClpP/crotonase-like domain superfamily (20.1%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.1%)" GQPTIGVAWTTDFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.4.1.- (50%) 2.4.1.319 (50%)" "Hexosyltransferases (50%) beta-1,4-mannooligosaccharide phosphorylase (50%)" "GO:0016757 (69.6%) GO:0016798 (30.4%)" "glycosyltransferase activity (69.6%) hydrolase activity, acting on glycosyl bonds (30.4%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" AIYWHDETMGADYTIEEIPANLVDEANEWRDK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" ATFVVDPQGIIQAIEVTAEGIGR root "1.11.1.26 (98.8%) 1.11.1.15 (0.6%) 1.11.1.24 (0.4%)" "NADH-dependent peroxiredoxin (98.8%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (0.6%) thioredoxin-dependent peroxiredoxin (0.4%)" "GO:0006979 (14.6%) GO:0042744 (14.6%) GO:0045454 (14.6%)" "GO:0005829 (14.6%) GO:0016020 (0.1%) GO:0005737 (0%)" "GO:0008379 (14.6%) GO:0102039 (11.9%) GO:0004601 (0.1%)" "response to oxidative stress (14.6%) hydrogen peroxide catabolic process (14.6%) cell redox homeostasis (14.6%)" "cytosol (14.6%) membrane (0.1%) cytoplasm (0%)" "thioredoxin peroxidase activity (14.6%) NADH-dependent peroxiredoxin activity (11.9%) peroxidase activity (0.1%)" "IPR036249 (14.5%) IPR050217 (14.5%) IPR019479 (14.4%)" "Thioredoxin-like superfamily (14.5%) Thiol-specific antioxidant peroxiredoxin (14.5%) Peroxiredoxin, C-terminal (14.4%)" LHSPLCITTPAEHLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR018958 (50%) IPR037883 (50%)" "Knr4/Smi1-like domain (50%) Knr4/Smi1-like domain superfamily (50%)" YVGNTPILDKEYVADR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" TNIYESAEEGSFAIAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.5%) GO:0006044 (32.5%)" "GO:0004342 (32.5%) GO:0016853 (2.5%)" "carbohydrate metabolic process (32.5%) N-acetylglucosamine metabolic process (32.5%)" "glucosamine-6-phosphate deaminase activity (32.5%) isomerase activity (2.5%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" YGVEVIALDKYPDAPAMQVAHR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.1.21 (100%) phosphoribosylglycinamide formyltransferase 2 (100%) GO:0006189 (16.7%) GO:0005829 (16.7%) "GO:0000287 (16.7%) GO:0004644 (16.7%) GO:0005524 (16.7%)" 'de novo' IMP biosynthetic process (16.7%) cytosol (16.7%) "magnesium ion binding (16.7%) phosphoribosylglycinamide formyltransferase activity (16.7%) ATP binding (16.7%)" "IPR003135 (12.5%) IPR005862 (12.5%) IPR011054 (12.5%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.5%) Formate-dependent phosphoribosylglycinamide formyltransferase (12.5%) Rudiment single hybrid motif (12.5%)" ITDLMFEGTDEDLKQTR AANPYLCFAALLMAGLDGIK root 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (14.8%) GO:0019740 (14.8%) GO:0009314 (0%)" "GO:0005737 (14.8%) GO:0016020 (14.8%) GO:0005829 (0%)" "GO:0004356 (14.8%) GO:0005524 (13%) GO:0046872 (12.9%)" "glutamine biosynthetic process (14.8%) nitrogen utilization (14.8%) response to radiation (0%)" "cytoplasm (14.8%) membrane (14.8%) cytosol (0%)" "glutamine synthetase activity (14.8%) ATP binding (13%) metal ion binding (12.9%)" "IPR008146 (13.7%) IPR014746 (13.7%) IPR027303 (12.7%)" "Glutamine synthetase, catalytic domain (13.7%) Glutamine synthetase/guanido kinase, catalytic domain (13.7%) Glutamine synthetase, glycine-rich site (12.7%)" STLIAAQEYEDGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (25%) GO:0000428 (25%) "GO:0003677 (25%) GO:0003899 (25%)" DNA-templated transcription (25%) DNA-directed RNA polymerase complex (25%) "DNA binding (25%) DNA-directed RNA polymerase activity (25%)" "IPR006110 (50%) IPR036161 (50%)" "RNA polymerase, subunit omega/Rpo6/RPB6 (50%) RPB6/omega subunit-like superfamily (50%)" VCQSASSDQVFDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) "IPR004155 (25%) IPR010496 (25%) IPR011989 (25%)" "PBS lyase HEAT-like repeat (25%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (25%) Armadillo-like helical (25%)" ILDMAANTEYLDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (25%) GO:0005829 (25%) "GO:0004830 (25%) GO:0005524 (25%)" tryptophanyl-tRNA aminoacylation (25%) cytosol (25%) "tryptophan-tRNA ligase activity (25%) ATP binding (25%)" "IPR002305 (17.6%) IPR002306 (17.6%) IPR014729 (17.6%)" "Aminoacyl-tRNA synthetase, class Ic (17.6%) Tryptophan-tRNA ligase (17.6%) Rossmann-like alpha/beta/alpha sandwich fold (17.6%)" VMAGCLDSNASRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.-.-.- (100%) Ligases (100%) GO:0015977 (22.5%) GO:0009317 (22.5%) "GO:0004658 (23.3%) GO:0003989 (22.5%) GO:0016740 (7.5%)" carbon fixation (22.5%) acetyl-CoA carboxylase complex (22.5%) "propionyl-CoA carboxylase activity (23.3%) acetyl-CoA carboxylase activity (22.5%) transferase activity (7.5%)" "IPR011763 (20.1%) IPR029045 (20.1%) IPR034733 (20.1%)" "Acetyl-coenzyme A carboxyltransferase, C-terminal (20.1%) ClpP/crotonase-like domain superfamily (20.1%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.1%)" NPSISTHLLGSNASSVIR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006950 (14.3%) GO:1902021 (14.3%)" GO:0005737 (14.3%) "GO:0004017 (14.3%) GO:0004672 (14.3%) GO:0042803 (14.3%)" "response to stress (14.3%) regulation of bacterial-type flagellum-dependent cell motility (14.3%)" cytoplasm (14.3%) "AMP kinase activity (14.3%) protein kinase activity (14.3%) protein homodimerization activity (14.3%)" "IPR006016 (33.5%) IPR014729 (33.5%) IPR006015 (33.1%)" "UspA (33.5%) Rossmann-like alpha/beta/alpha sandwich fold (33.5%) Universal stress protein A family (33.1%)" EGVEGEVYNVGGHNEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.46 (100%) dTDP-glucose 4,6-dehydratase (100%) GO:0009225 (49.4%) "GO:0008460 (49.4%) GO:0016829 (1.2%)" nucleotide-sugar metabolic process (49.4%) "dTDP-glucose 4,6-dehydratase activity (49.4%) lyase activity (1.2%)" "IPR016040 (33.6%) IPR036291 (33.6%) IPR005888 (32.8%)" "NAD(P)-binding domain (33.6%) NAD(P)-binding domain superfamily (33.6%) dTDP-glucose 4,6-dehydratase (32.8%)" TIKSEAVENAADAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.3.5.5 (87.8%) 6.3.4.16 (12.2%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (87.8%) carbamoyl-phosphate synthase (ammonia) (12.2%)" "GO:0006541 (13.8%) GO:0006221 (12.6%) GO:0006526 (12.6%)" GO:0005737 (13.8%) "GO:0004088 (13.8%) GO:0005524 (13.8%) GO:0046872 (13.8%)" "glutamine metabolic process (13.8%) pyrimidine nucleotide biosynthetic process (12.6%) L-arginine biosynthetic process (12.6%)" cytoplasm (13.8%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.8%) ATP binding (13.8%) metal ion binding (13.8%)" "IPR005479 (10.2%) IPR005480 (10.2%) IPR005483 (10.2%)" "Carbamoyl phosphate synthase, ATP-binding domain (10.2%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10.2%) Carbamoyl phosphate synthase, CPSase domain (10.2%)" VLIPYTNEPEVTIGQHIIQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae KDENGSIIYDDDFFGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.1%) GO:0005737 (19.3%) "GO:0003676 (20.1%) GO:0004816 (20.1%) GO:0005524 (20.1%)" asparaginyl-tRNA aminoacylation (20.1%) cytoplasm (19.3%) "nucleic acid binding (20.1%) asparagine-tRNA ligase activity (20.1%) ATP binding (20.1%)" "IPR004364 (14.3%) IPR004365 (14.3%) IPR004522 (14.3%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (14.3%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (14.3%) Asparagine-tRNA ligase (14.3%)" GVLFLVDTWGGSPFNAASR root "2.7.1.191 (98.6%) 2.7.1.- (0.8%) 2.7.1.69 (0.6%)" "protein-N(pi)-phosphohistidine--D-mannose phosphotransferase (98.6%) Phosphotransferases with an alcohol group as acceptor (0.8%) Transferred entry: 2.7.1.191, 2.7.1.192, 2.7.1.193, 2.7.1.194, 2.7.1.1952.7.1.196, 2.7.1.197, 2.7.1.198, 2.7.1.199, 2.7.1.200, 2.7.1.2012.7.1.202, 2.7.1.203, 2.7.1.204, 2.7.1.205, 2.7.1.206, 2.7.1.207 an2.7.1.208 (0.6%)" "GO:0009401 (19.9%) GO:0015761 (0%) GO:0015764 (0%)" "GO:0005737 (19.9%) GO:0005886 (19.3%) GO:0016020 (0.7%)" "GO:0016301 (19.9%) GO:0008982 (19.3%) GO:0016773 (0.6%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (19.9%) mannose transmembrane transport (0%) N-acetylglucosamine transport (0%)" "cytoplasm (19.9%) plasma membrane (19.3%) membrane (0.7%)" "kinase activity (19.9%) protein-N(PI)-phosphohistidine-sugar phosphotransferase activity (19.3%) phosphotransferase activity, alcohol group as acceptor (0.6%)" "IPR004701 (12.7%) IPR033887 (12.7%) IPR051471 (12.7%)" "Phosphotransferase system, mannose-type IIA component (12.7%) PTS system mannose/sorbose specific IIA subunit (12.7%) Bacterial PTS system sugar-specific components (12.7%)" GALENPETKDDAKTWYVAGFIEDQQFSNER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" GWDSNWYGGNDYGDALLEDSKIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.5%) GO:0022627 (20.5%) "GO:0003735 (20.5%) GO:0019843 (20.5%) GO:0003729 (17.9%)" translation (20.5%) cytosolic small ribosomal subunit (20.5%) "structural constituent of ribosome (20.5%) rRNA binding (20.5%) mRNA binding (17.9%)" "IPR001351 (11.3%) IPR004044 (11.3%) IPR004087 (11.3%)" "Small ribosomal subunit protein uS3, C-terminal (11.3%) K Homology domain, type 2 (11.3%) K Homology domain (11.3%)" YCEDLFNEEFKAIETPISFTAER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" SFLNVTTDKVYLNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.45 (100%) CDP-glucose 4,6-dehydratase (100%) "GO:0047733 (75%) GO:0016829 (25%)" "CDP-glucose 4,6-dehydratase activity (75%) lyase activity (25%)" "IPR013445 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "CDP-glucose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" FVPETDYVVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) GO:0033539 (32.9%) "GO:0009055 (32.9%) GO:0050660 (32.9%) GO:0016491 (1.3%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (32.9%) "electron transfer activity (32.9%) flavin adenine dinucleotide binding (32.9%) oxidoreductase activity (1.3%)" "IPR001308 (16.7%) IPR014729 (16.7%) IPR014730 (16.7%)" "Electron transfer flavoprotein alpha subunit/FixB (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.7%)" GVDLDGNEIERHSSDEEPFSALAFK SIGILCEDYITDKVVNVDIFEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" LTEAGETDVDRK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.162 (100%) N-acetylhexosamine 1-kinase (100%) "GO:0016740 (88.9%) GO:0016301 (11.1%)" "transferase activity (88.9%) kinase activity (11.1%)" "IPR002575 (33.3%) IPR011009 (33.3%) IPR050249 (33.3%)" "Aminoglycoside phosphotransferase (33.3%) Protein kinase-like domain superfamily (33.3%) Pseudomonas-type Homoserine Kinase (33.3%)" AGMTREDLLKGNAAIAEEFGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.37 (93.3%) 1.1.1.- (6.7%)" "malate dehydrogenase (93.3%) With NAD(+) or NADP(+) as acceptor (6.7%)" "GO:0006108 (33%) GO:0006099 (1.3%) GO:0019752 (0.3%)" GO:0005737 (1.3%) "GO:0016615 (29.8%) GO:0016616 (29.8%) GO:0030060 (4.5%)" "malate metabolic process (33%) tricarboxylic acid cycle (1.3%) carboxylic acid metabolic process (0.3%)" cytoplasm (1.3%) "malate dehydrogenase activity (29.8%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (29.8%) L-malate dehydrogenase (NAD+) activity (4.5%)" "IPR001236 (17.1%) IPR036291 (17.1%) IPR001557 (16.6%)" "Lactate/malate dehydrogenase, N-terminal (17.1%) NAD(P)-binding domain superfamily (17.1%) L-lactate/malate dehydrogenase (16.6%)" TVSTNPCGEIPLCPYDSCR Pseudomonadati Bacteria Pseudomonadati 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20%) GO:0009263 (17.6%)" "GO:0004748 (20.8%) GO:0031419 (20.8%) GO:0005524 (17.6%)" "DNA biosynthetic process (20%) deoxyribonucleotide biosynthetic process (17.6%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.8%) cobalamin binding (20.8%) ATP binding (17.6%)" "IPR000788 (26.1%) IPR050862 (26.1%) IPR013344 (25.8%)" "Ribonucleotide reductase large subunit, C-terminal (26.1%) Ribonucleoside diphosphate reductase class-2 (26.1%) Ribonucleotide reductase, adenosylcobalamin-dependent (25.8%)" TWTDKGVQCDLAMIGSK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0042777 (17.9%) GO:0015986 (0.2%)" "GO:0005886 (19.2%) GO:0045259 (19.2%) GO:0016020 (0.2%)" "GO:0046933 (19.2%) GO:0005524 (17.9%) GO:0016787 (6.1%)" "proton motive force-driven plasma membrane ATP synthesis (17.9%) proton motive force-driven ATP synthesis (0.2%)" "plasma membrane (19.2%) proton-transporting ATP synthase complex (19.2%) membrane (0.2%)" "proton-transporting ATP synthase activity, rotational mechanism (19.2%) ATP binding (17.9%) hydrolase activity (6.1%)" "IPR000131 (34%) IPR035968 (34%) IPR023632 (32.1%)" "ATP synthase, F1 complex, gamma subunit (34%) ATP synthase, F1 complex, gamma subunit superfamily (34%) ATP synthase, F1 complex, gamma subunit conserved site (32.1%)" VQVNSDSHYPER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.1.3.15 (100%) histidinol-phosphatase (100%) GO:0000105 (33.3%) GO:0005737 (33.3%) GO:0004401 (33.3%) L-histidine biosynthetic process (33.3%) cytoplasm (33.3%) histidinol-phosphatase activity (33.3%) "IPR004013 (33.3%) IPR010140 (33.3%) IPR016195 (33.3%)" "PHP domain (33.3%) Histidinol phosphate phosphatase, HisJ (33.3%) Polymerase/histidinol phosphatase-like (33.3%)" ATNAVIGGEGNGGVIYPASHYGR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "5.4.2.10 (79.3%) 5.4.2.2 (17.2%) 5.4.2.8 (3.4%)" "phosphoglucosamine mutase (79.3%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (17.2%) phosphomannomutase (3.4%)" "GO:0005975 (13.9%) GO:0006048 (13.9%) GO:0009252 (13.9%)" GO:0005829 (13.9%) "GO:0000287 (13.9%) GO:0004615 (13.9%) GO:0008966 (13.9%)" "carbohydrate metabolic process (13.9%) UDP-N-acetylglucosamine biosynthetic process (13.9%) peptidoglycan biosynthetic process (13.9%)" cytosol (13.9%) "magnesium ion binding (13.9%) phosphomannomutase activity (13.9%) phosphoglucosamine mutase activity (13.9%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" SGDYIMKPIMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (62.5%) GO:0004340 (37.5%)" "kinase activity (62.5%) glucokinase activity (37.5%)" "IPR000600 (34%) IPR043129 (34%) IPR049874 (32%)" "ROK family (34%) ATPase, nucleotide binding domain (34%) ROK, conserved site (32%)" ATIVMPATAPLAK Bacteria Bacteria 4.3.1.19 (100%) threonine ammonia-lyase (100%) "GO:0006565 (18.6%) GO:0009097 (18.6%) GO:0006567 (14.2%)" "GO:0003941 (18.6%) GO:0004794 (18.6%) GO:0030170 (5.3%)" "L-serine catabolic process (18.6%) isoleucine biosynthetic process (18.6%) L-threonine catabolic process (14.2%)" "L-serine ammonia-lyase activity (18.6%) threonine deaminase activity (18.6%) pyridoxal phosphate binding (5.3%)" "IPR001926 (14.5%) IPR036052 (14.5%) IPR050147 (14.5%)" "Tryptophan synthase beta chain-like, PALP domain (14.5%) Tryptophan synthase beta chain-like, PALP domain superfamily (14.5%) Serine/Threonine Dehydratase (14.5%)" FQQTILLPENVEKDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" IKKDAEAMAEQLKDVTLTIATK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000244 (14.3%) IPR009027 (14.3%) IPR020069 (14.3%)" "Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.3%) Large ribosomal subunit protein bL9, C-terminal (14.3%)" KVPQVSTPTLVEVSR Mammalia Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia "GO:0051902 (3.1%) GO:0072732 (3.1%) GO:0009267 (0.3%)" "GO:0072562 (10.3%) GO:0005737 (8.2%) GO:0005615 (3.3%)" "GO:0046872 (13.8%) GO:1903981 (10.9%) GO:0008289 (10.9%)" "negative regulation of mitochondrial depolarization (3.1%) cellular response to calcium ion starvation (3.1%) cellular response to starvation (0.3%)" "blood microparticle (10.3%) cytoplasm (8.2%) extracellular space (3.3%)" "metal ion binding (13.8%) enterobactin binding (10.9%) lipid binding (10.9%)" "IPR000264 (21.6%) IPR014760 (21.6%) IPR020858 (21.6%)" "ALB/AFP/VDB (21.6%) Serum albumin, N-terminal (21.6%) Serum albumin-like (21.6%)" QLEGTPQMLITSLDYSAYTGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0009409 (10.3%) GO:0010467 (9.1%) GO:0000027 (8.5%)" "GO:0005829 (10.9%) GO:1990904 (10.9%)" "GO:0003924 (10.9%) GO:0005525 (10.9%) GO:0000049 (8.5%)" "response to cold (10.3%) gene expression (9.1%) ribosomal large subunit assembly (8.5%)" "cytosol (10.9%) ribonucleoprotein complex (10.9%)" "GTPase activity (10.9%) GTP binding (10.9%) tRNA binding (8.5%)" "IPR000795 (6.8%) IPR004161 (6.8%) IPR005225 (6.8%)" "Translational (tr)-type GTP-binding domain (6.8%) Translation elongation factor EFTu-like, domain 2 (6.8%) Small GTP-binding domain (6.8%)" MAASRPYAETMR root 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0042777 (18.7%) GO:0015986 (0.1%)" "GO:0045259 (19.4%) GO:0005886 (19.4%) GO:0016020 (0%)" "GO:0046933 (19.4%) GO:0005524 (18.7%) GO:0016787 (4.3%)" "proton motive force-driven plasma membrane ATP synthesis (18.7%) proton motive force-driven ATP synthesis (0.1%)" "proton-transporting ATP synthase complex (19.4%) plasma membrane (19.4%) membrane (0%)" "proton-transporting ATP synthase activity, rotational mechanism (19.4%) ATP binding (18.7%) hydrolase activity (4.3%)" "IPR000131 (33.8%) IPR035968 (33.8%) IPR023632 (32.4%)" "ATP synthase, F1 complex, gamma subunit (33.8%) ATP synthase, F1 complex, gamma subunit superfamily (33.8%) ATP synthase, F1 complex, gamma subunit conserved site (32.4%)" MKPTLFVLAAGMGSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016740 (100%) transferase activity (100%) "IPR029044 (90.1%) IPR005835 (9.9%)" "Nucleotide-diphospho-sugar transferases (90.1%) Nucleotidyl transferase domain (9.9%)" EFADNLDSDFKVR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (19.9%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (19.9%) GO:0005840 (0.5%) GO:1990904 (0.1%)" "GO:0019843 (20%) GO:0003735 (19.9%) GO:0003729 (19.5%)" "translation (19.9%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (19.9%) ribosome (0.5%) ribonucleoprotein complex (0.1%)" "rRNA binding (20%) structural constituent of ribosome (19.9%) mRNA binding (19.5%)" "IPR009019 (11.3%) IPR015946 (11.3%) IPR004044 (11.3%)" "K homology domain superfamily, prokaryotic type (11.3%) K homology domain-like, alpha/beta (11.3%) K Homology domain, type 2 (11.3%)" ILAYSGLMEDKEVTWMPAYGPEQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (60%) 1.2.7.3 (20%) 1.2.7.7 (20%)" "pyruvate synthase (60%) 2-oxoglutarate synthase (20%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) (20%)" "GO:0016903 (93.2%) GO:0019164 (4.1%) GO:0016625 (1.4%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (93.2%) pyruvate synthase activity (4.1%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (1.4%)" "IPR002869 (33.2%) IPR019752 (33.2%) IPR052554 (33.2%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.2%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.2%) 2-oxoglutarate synthase subunit KorC (33.2%)" QDDLTISSLAK root GO:0061077 (0.9%) "GO:0042597 (96.4%) GO:0030288 (0.9%)" "GO:0042803 (0.9%) GO:0060241 (0.9%)" obsolete chaperone-mediated protein folding (0.9%) "periplasmic space (96.4%) outer membrane-bounded periplasmic space (0.9%)" "protein homodimerization activity (0.9%) lysozyme inhibitor activity (0.9%)" "IPR036501 (50.6%) IPR014453 (49.4%)" "Inhibitor of vertebrate lysozyme superfamily (50.6%) Inhibitor of vertebrate lysozyme (49.4%)" ALLNSMVIGVTEGFTKK root "GO:0002181 (24.8%) GO:0000027 (0%) GO:0006412 (0%)" "GO:0022625 (24.8%) GO:0005840 (0.5%) GO:0005737 (0%)" "GO:0003735 (24.8%) GO:0019843 (24.8%) GO:0070180 (0%)" "cytoplasmic translation (24.8%) ribosomal large subunit assembly (0%) translation (0%)" "cytosolic large ribosomal subunit (24.8%) ribosome (0.5%) cytoplasm (0%)" "structural constituent of ribosome (24.8%) rRNA binding (24.8%) large ribosomal subunit rRNA binding (0%)" "IPR000702 (20%) IPR020040 (20%) IPR036789 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, alpha-beta domain (20%) Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily (20%)" TANYYYVDKTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005524 (100%) ATP binding (100%) "IPR012547 (50%) IPR018631 (50%)" "PD-(D/E)XK nuclease superfamily 9 (50%) AAA-ATPase-like domain (50%)" ANYIVGHNEIAENIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR024492 (100%) CT_309/TC_0583-like (100%) FCTTEGIENVIPLSDFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.11.1.24 (88.4%) 1.11.1.- (11.6%)" "thioredoxin-dependent peroxiredoxin (88.4%) Peroxidases (11.6%)" GO:0034599 (1.6%) GO:0008379 (98.4%) cellular response to oxidative stress (1.6%) thioredoxin peroxidase activity (98.4%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" NFASYGHLMGEMPR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.7.9.3 (100%) selenide, water dikinase (100%) "GO:0016260 (20.2%) GO:0070329 (0.1%)" "GO:0005737 (20.2%) GO:0005829 (0.1%)" "GO:0004756 (20.6%) GO:0005524 (20.2%) GO:0000287 (17.7%)" "selenocysteine biosynthetic process (20.2%) tRNA seleno-modification (0.1%)" "cytoplasm (20.2%) cytosol (0.1%)" "selenide, water dikinase activity (20.6%) ATP binding (20.2%) magnesium ion binding (17.7%)" "IPR010918 (17.8%) IPR036676 (17.8%) IPR004536 (17.4%)" "PurM-like, C-terminal domain (17.8%) PurM-like, C-terminal domain superfamily (17.8%) Selenophosphate synthetase (17.4%)" MTAITDKLNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.3%) "GO:0005840 (19.8%) GO:1990904 (19.8%) GO:0022625 (0.5%)" "GO:0003735 (20.3%) GO:0019843 (19.4%)" translation (20.3%) "ribosome (19.8%) ribonucleoprotein complex (19.8%) cytosolic large ribosomal subunit (0.5%)" "structural constituent of ribosome (20.3%) rRNA binding (19.4%)" "IPR012677 (33.3%) IPR012678 (33.3%) IPR013025 (33.3%)" "Nucleotide-binding alpha-beta plait domain superfamily (33.3%) Ribosomal protein uL23/eL15/eS24 core domain superfamily (33.3%) Large ribosomal subunit protein uL23-like (33.3%)" FYQFWLNVSDADAAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.8%) GO:0005829 (16.8%) "GO:0003723 (16.8%) GO:0004831 (16.8%) GO:0005524 (16.8%)" tyrosyl-tRNA aminoacylation (16.8%) cytosol (16.8%) "RNA binding (16.8%) tyrosine-tRNA ligase activity (16.8%) ATP binding (16.8%)" "IPR001412 (12.6%) IPR002305 (12.6%) IPR002307 (12.6%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.6%) Aminoacyl-tRNA synthetase, class Ic (12.6%) Tyrosine-tRNA ligase (12.6%)" GVISTSRPDLNAAKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (17.7%) "GO:0016746 (17.7%) GO:0046872 (17.7%) GO:0051287 (17.7%)" malate metabolic process (17.7%) "acyltransferase activity (17.7%) metal ion binding (17.7%) NAD binding (17.7%)" "IPR002505 (9.1%) IPR012188 (9.1%) IPR012301 (9.1%)" "Phosphate acetyl/butaryl transferase (9.1%) NAD(P)-dependent malic enzyme (9.1%) Malic enzyme, N-terminal domain (9.1%)" YATVGDVIVVAIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000218 (25%) IPR005745 (25%) IPR019972 (25%)" "Large ribosomal subunit protein uL14 (25%) Large ribosomal subunit protein uL14, bacteria (25%) Large ribosomal subunit protein uL14, conserved site (25%)" GGHSGIEINEGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) "GO:0006508 (25%) GO:0043171 (0.1%)" GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" "proteolysis (25%) peptide catabolic process (0.1%)" cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (31.1%) IPR002933 (31.1%) IPR011650 (31.1%)" "Peptidase M20C, Xaa-His dipeptidase (31.1%) Peptidase M20 (31.1%) Peptidase M20, dimerisation domain (31.1%)" EHGYETVVMGASFR root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (24.8%) GO:0006098 (24.7%) GO:0009052 (0.1%)" "GO:0005829 (24.8%) GO:0016020 (0.1%)" "GO:0004801 (24.8%) GO:0016740 (0.4%) GO:0016744 (0.1%)" "carbohydrate metabolic process (24.8%) pentose-phosphate shunt (24.7%) pentose-phosphate shunt, non-oxidative branch (0.1%)" "cytosol (24.8%) membrane (0.1%)" "transaldolase activity (24.8%) transferase activity (0.4%) transketolase or transaldolase activity (0.1%)" "IPR001585 (25.3%) IPR013785 (25.3%) IPR004730 (24.7%)" "Transaldolase/Fructose-6-phosphate aldolase (25.3%) Aldolase-type TIM barrel (25.3%) Transaldolase type 1 (24.7%)" GESDPSPEEK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.9%) GO:0006508 (0.2%)" GO:0000428 (19.9%) "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (19.9%)" "DNA-templated transcription (19.9%) proteolysis (0.2%)" DNA-directed RNA polymerase complex (19.9%) "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (19.9%)" "IPR007120 (8.1%) IPR015712 (8.1%) IPR014724 (8.1%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (8.1%) DNA-directed RNA polymerase, subunit 2 (8.1%) RNA polymerase Rpb2, OB-fold (8.1%)" LSEKGDDEAMFIDQDFLR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.7%) "GO:0005829 (16.7%) GO:0016020 (0.1%)" "GO:0000049 (16.7%) GO:0004824 (16.7%) GO:0005524 (16.7%)" lysyl-tRNA aminoacylation (16.7%) "cytosol (16.7%) membrane (0.1%)" "tRNA binding (16.7%) lysine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR004364 (12.3%) IPR006195 (12.3%) IPR045864 (12.3%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (12.3%) Aminoacyl-tRNA synthetase, class II (12.3%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (12.3%)" ESDAILREEFK Bacteria Bacteria 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (32.5%) "GO:0003921 (32.5%) GO:0005524 (32.5%) GO:0016740 (2.5%)" cytosol (32.5%) "GMP synthase activity (32.5%) ATP binding (32.5%) transferase activity (2.5%)" "IPR001674 (16.7%) IPR014729 (16.7%) IPR017926 (16.7%)" "GMP synthase, C-terminal (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Glutamine amidotransferase (16.7%)" EILVLEEGYPVVEEQLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.7.8 (100%) indolepyruvate ferredoxin oxidoreductase (100%) GO:0044281 (19.7%) "GO:0030976 (20.4%) GO:0043805 (20.4%) GO:0046872 (19.7%)" small molecule metabolic process (19.7%) "thiamine pyrophosphate binding (20.4%) indolepyruvate ferredoxin oxidoreductase activity (20.4%) metal ion binding (19.7%)" "IPR002880 (20%) IPR011766 (20%) IPR017721 (20%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20%) Thiamine pyrophosphate enzyme, TPP-binding (20%) Indolepyruvate oxidoreductase subunit IorA (20%)" QLAEDINKFCAPIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (25%) GO:0005829 (25%) "GO:0004830 (25%) GO:0005524 (25%)" tryptophanyl-tRNA aminoacylation (25%) cytosol (25%) "tryptophan-tRNA ligase activity (25%) ATP binding (25%)" "IPR002305 (17.5%) IPR002306 (17.5%) IPR014729 (17.5%)" "Aminoacyl-tRNA synthetase, class Ic (17.5%) Tryptophan-tRNA ligase (17.5%) Rossmann-like alpha/beta/alpha sandwich fold (17.5%)" EIAELKEQETSYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0034605 (20%) GO:0042026 (19%) GO:0006508 (0.5%)" GO:0005737 (20%) "GO:0005524 (20%) GO:0016887 (20%) GO:0008233 (0.5%)" "cellular response to heat (20%) protein refolding (19%) proteolysis (0.5%)" cytoplasm (20%) "ATP binding (20%) ATP hydrolysis activity (20%) peptidase activity (0.5%)" "IPR003593 (8.2%) IPR003959 (8.2%) IPR027417 (8.2%)" "AAA+ ATPase domain (8.2%) ATPase, AAA-type, core (8.2%) P-loop containing nucleoside triphosphate hydrolase (8.2%)" LLIGDDEHGWDNEGVFNYEGGCYAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.5%) GO:0005829 (17.5%) "GO:0004612 (17.5%) GO:0005524 (17.5%) GO:0046872 (17.5%)" gluconeogenesis (17.5%) cytosol (17.5%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.5%) ATP binding (17.5%) metal ion binding (17.5%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" AVNNGEIAYNDIHLSQMAQEVR Pseudomonadati Bacteria Pseudomonadati "2.8.3.- (91.9%) 3.1.2.1 (8.1%)" "CoA-transferases (91.9%) acetyl-CoA hydrolase (8.1%)" "GO:0006083 (25%) GO:0006084 (24.8%)" "GO:0003986 (25%) GO:0008775 (25%) GO:0016740 (0.2%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (24.8%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%) transferase activity (0.2%)" "IPR003702 (16.7%) IPR037171 (16.7%) IPR046433 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) NagB/RpiA transferase-like (16.7%) Acetyl-CoA hydrolase/transferase (16.7%)" FITACDYFFEQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR007139 (100%) Protein of unknown function DUF349 (100%) YGDDKVIAPGTVIISAGAEVSDIKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" QFASNSTEVKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" VKEAYDLIVEGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20.2%) IPR011258 (20.2%) IPR006124 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.2%) BPG-independent PGAM, N-terminal (20.2%) Metalloenzyme (20%)" TISYAESHDQALVGDK root "2.4.1.18 (99.7%) 3.2.1.- (0.3%)" "1,4-alpha-glucan branching enzyme (99.7%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (0.3%)" "GO:0005978 (19.2%) GO:0006508 (1.2%) GO:0005975 (0.5%)" "GO:0005737 (19.7%) GO:0016020 (0.1%)" "GO:0003844 (19.7%) GO:0043169 (19.3%) GO:0004553 (19.1%)" "glycogen biosynthetic process (19.2%) proteolysis (1.2%) carbohydrate metabolic process (0.5%)" "cytoplasm (19.7%) membrane (0.1%)" "1,4-alpha-glucan branching enzyme activity (19.7%) cation binding (19.3%) hydrolase activity, hydrolyzing O-glycosyl compounds (19.1%)" "IPR017853 (12.8%) IPR006048 (12.6%) IPR013780 (12.6%)" "Glycoside hydrolase superfamily (12.8%) Alpha-amylase/branching enzyme, C-terminal all beta (12.6%) Glycosyl hydrolase, all-beta (12.6%)" SYTLPSLPYAYDALEPHFDKQTMEIHHTK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0019430 (0.1%) GO:0006801 (0.1%) GO:0006979 (0.1%)" "GO:0005737 (33%) GO:0005829 (0.1%)" "GO:0004784 (33%) GO:0030145 (31.7%) GO:0046872 (1.3%)" "removal of superoxide radicals (0.1%) superoxide metabolic process (0.1%) response to oxidative stress (0.1%)" "cytoplasm (33%) cytosol (0.1%)" "superoxide dismutase activity (33%) manganese ion binding (31.7%) metal ion binding (1.3%)" "IPR001189 (16.9%) IPR019831 (16.9%) IPR036324 (16.9%)" "Manganese/iron superoxide dismutase (16.9%) Manganese/iron superoxide dismutase, N-terminal (16.9%) Manganese/iron superoxide dismutase, N-terminal domain superfamily (16.9%)" FGHHGGNHPVKDVEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006207 (15.1%) GO:0006526 (15.1%) GO:0006541 (15.1%)" "GO:0005737 (0.1%) GO:0005829 (0.1%) GO:0005951 (0.1%)" "GO:0004088 (16.5%) GO:0005524 (14.7%) GO:0004359 (6.5%)" "'de novo' pyrimidine nucleobase biosynthetic process (15.1%) L-arginine biosynthetic process (15.1%) glutamine metabolic process (15.1%)" "cytoplasm (0.1%) cytosol (0.1%) carbamoyl-phosphate synthase complex (0.1%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (16.5%) ATP binding (14.7%) glutaminase activity (6.5%)" "IPR017926 (15.1%) IPR029062 (15.1%) IPR050472 (15%)" "Glutamine amidotransferase (15.1%) Class I glutamine amidotransferase-like (15.1%) Anthranilate Synthase/Amidotransferase (15%)" ESDGAIFNNAGQVLNHNLYFTQFSPNGGGEPTGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0004784 (50%) GO:0046872 (50%)" "superoxide dismutase activity (50%) metal ion binding (50%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" NNEIILAHCTIGMK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005996 (33.3%) GO:0005737 (33.3%) GO:0016861 (33.3%) monosaccharide metabolic process (33.3%) cytoplasm (33.3%) intramolecular oxidoreductase activity, interconverting aldoses and ketoses (33.3%) IPR009015 (100%) L-fucose isomerase, N-terminal/central domain superfamily (100%) FVSPVSGVVTSVERGER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (25.2%) IPR056147 (25.2%) IPR056148 (25.2%)" "Na(+)-translocating NADH-quinone reductase subunit A (25.2%) NqrA, N-terminal barrel-sandwich hybrid domain (25.2%) NqrA, second alpha/beta domain (25.2%)" YAPDHIAEKAEDILK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.3.18 (100%) phosphoglycolate phosphatase (100%) GO:0006281 (33.3%) GO:0005829 (33.3%) GO:0008967 (33.3%) DNA repair (33.3%) cytosol (33.3%) phosphoglycolate phosphatase activity (33.3%) "IPR006439 (16.4%) IPR023198 (16.4%) IPR023214 (16.4%)" "HAD hydrolase, subfamily IA (16.4%) Phosphoglycolate phosphatase-like, domain 2 (16.4%) HAD superfamily (16.4%)" TFGEYLLIPGLTTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (25.2%) GO:0006177 (24.8%)" "GO:0003938 (25.2%) GO:0046872 (24.8%)" "GTP biosynthetic process (25.2%) GMP biosynthetic process (24.8%)" "IMP dehydrogenase activity (25.2%) metal ion binding (24.8%)" "IPR001093 (16.8%) IPR005990 (16.8%) IPR013785 (16.8%)" "IMP dehydrogenase/GMP reductase (16.8%) Inosine-5'-monophosphate dehydrogenase (16.8%) Aldolase-type TIM barrel (16.8%)" ANQWSYNEMIGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.24.- (100%) Metalloendopeptidases (100%) GO:0016485 (25%) GO:0005886 (25%) "GO:0004222 (25%) GO:0046872 (25%)" protein processing (25%) plasma membrane (25%) "metalloendopeptidase activity (25%) metal ion binding (25%)" "IPR000718 (20%) IPR008753 (20%) IPR018497 (20%)" "Peptidase M13 (20%) Peptidase M13, N-terminal domain (20%) Peptidase M13, C-terminal domain (20%)" EYVVKGDKEGTER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.6.2.1 (100%) DNA topoisomerase (100%) GO:0006265 (25%) "GO:0003677 (25%) GO:0003917 (25%) GO:0046872 (25%)" DNA topological change (25%) "DNA binding (25%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25%) metal ion binding (25%)" "IPR000380 (7.1%) IPR003601 (7.1%) IPR003602 (7.1%)" "DNA topoisomerase, type IA (7.1%) DNA topoisomerase, type IA, domain 2 (7.1%) DNA topoisomerase, type IA, DNA-binding domain (7.1%)" KKLTEAGETDVDRK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.162 (100%) N-acetylhexosamine 1-kinase (100%) "GO:0016740 (88.9%) GO:0016301 (11.1%)" "transferase activity (88.9%) kinase activity (11.1%)" "IPR002575 (33.3%) IPR011009 (33.3%) IPR050249 (33.3%)" "Aminoglycoside phosphotransferase (33.3%) Protein kinase-like domain superfamily (33.3%) Pseudomonas-type Homoserine Kinase (33.3%)" LVKELTGLGLKEAK root GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20.1%) IPR013823 (20.1%) IPR014719 (20%)" "Large ribosomal subunit protein bL12 (20.1%) Large ribosomal subunit protein bL12, C-terminal (20.1%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20%)" FYDFLIATLEQTPMK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" MGDIVLAGTHQGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.3%) IPR000795 (8.3%) IPR004161 (8.3%)" "Translation initiation factor IF-2, bacterial-like (8.3%) Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" HKAEYTPHVDTGDYIIVLNADKVAVTGNK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.8%) GO:0017148 (19.8%) GO:0002181 (0%)" "GO:0022625 (19.8%) GO:0005840 (0.6%) GO:0005737 (0.1%)" "GO:0003735 (19.9%) GO:0003729 (19.8%) GO:0008270 (0%)" "translation (19.8%) negative regulation of translation (19.8%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (19.8%) ribosome (0.6%) cytoplasm (0.1%)" "structural constituent of ribosome (19.9%) mRNA binding (19.8%) zinc ion binding (0%)" "IPR005822 (25%) IPR005823 (25%) IPR036899 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13 superfamily (25%)" FSDFDVPLSEVYGVYR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0003677 (100%) DNA binding (100%) "IPR015927 (27.3%) IPR036286 (27.3%) IPR039418 (27.3%)" "Peptidase S24/S26A/S26B/S26C (27.3%) LexA/Signal peptidase-like superfamily (27.3%) LexA-like (27.3%)" AKVVEPKEPSAMLNIEQVVPADPKQPYDVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (22.7%) GO:0009317 (22.7%) "GO:0003989 (22.7%) GO:0004658 (22.7%) GO:0016740 (4.5%)" carbon fixation (22.7%) acetyl-CoA carboxylase complex (22.7%) "acetyl-CoA carboxylase activity (22.7%) propionyl-CoA carboxylase activity (22.7%) transferase activity (4.5%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" EADNEVISPIYLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016020 (100%) membrane (100%) "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" AVGQEGGYTYIFDLNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" TYYVYNNCSHQEAYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.5.1.7 (50%) 1.-.-.- (30%) 1.5.1.43 (20%)" "saccharopine dehydrogenase (NAD(+), L-lysine-forming) (50%) Oxidoreductases (30%) carboxynorspermidine synthase (20%)" "GO:0016491 (45.5%) GO:0004754 (27.3%) GO:0102143 (27.3%)" "oxidoreductase activity (45.5%) saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (27.3%) carboxynorspermidine dehydrogenase activity (27.3%)" "IPR032095 (33.9%) IPR005097 (33%) IPR036291 (33%)" "Saccharopine dehydrogenase-like, C-terminal (33.9%) Saccharopine dehydrogenase, NADP binding domain (33%) NAD(P)-binding domain superfamily (33%)" VGDEVEAVVLTLDREERK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (24.7%) "GO:0022627 (24.1%) GO:0005840 (1%) GO:1990904 (0.6%)" "GO:0003729 (24.7%) GO:0003735 (24.7%)" translation (24.7%) "cytosolic small ribosomal subunit (24.1%) ribosome (1%) ribonucleoprotein complex (0.6%)" "mRNA binding (24.7%) structural constituent of ribosome (24.7%)" "IPR003029 (24.5%) IPR012340 (24.5%) IPR035104 (24.5%)" "S1 domain (24.5%) Nucleic acid-binding, OB-fold (24.5%) Ribosomal protein S1-like (24.5%)" YISNLSYNISDEDLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003723 (100%) RNA binding (100%) "IPR000504 (20%) IPR012677 (20%) IPR035979 (20%)" "RNA recognition motif domain (20%) Nucleotide-binding alpha-beta plait domain superfamily (20%) RNA-binding domain superfamily (20%)" IAIAVAGFAESELEITAQDNLLVVK root "GO:0050821 (49.6%) GO:0009408 (0.1%) GO:0017148 (0.1%)" "GO:0005737 (49.6%) GO:0005829 (0.1%)" "GO:0042802 (0.1%) GO:0042803 (0.1%) GO:0048027 (0.1%)" "protein stabilization (49.6%) response to heat (0.1%) negative regulation of translation (0.1%)" "cytoplasm (49.6%) cytosol (0.1%)" "identical protein binding (0.1%) protein homodimerization activity (0.1%) mRNA 5'-UTR binding (0.1%)" "IPR002068 (25%) IPR008978 (25%) IPR037913 (25%)" "Alpha crystallin/Hsp20 domain (25%) HSP20-like chaperone (25%) Small heat shock protein IbpA/IbpB, ACD domain (25%)" IYDLCAFIHDVIKPTKIPAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005829 (50%) GO:0016491 (50%) cytosol (50%) oxidoreductase activity (50%) IPR004017 (100%) Cysteine-rich domain (100%) HLDDLKGTFAQLSELHCDK Mammalia Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia "GO:0042744 (7.2%) GO:0098869 (0.9%) GO:0015671 (0.6%)" "GO:0005833 (10.1%) GO:0031838 (7.5%) GO:0072562 (6.4%)" "GO:0005344 (10.1%) GO:0019825 (10.1%) GO:0020037 (10.1%)" "hydrogen peroxide catabolic process (7.2%) cellular oxidant detoxification (0.9%) oxygen transport (0.6%)" "hemoglobin complex (10.1%) haptoglobin-hemoglobin complex (7.5%) blood microparticle (6.4%)" "oxygen carrier activity (10.1%) oxygen binding (10.1%) heme binding (10.1%)" "IPR000971 (20.1%) IPR050056 (20.1%) IPR002337 (19.8%)" "Globin (20.1%) Hemoglobin and related oxygen transporters (20.1%) Hemoglobin, beta-type (19.8%)" ADIPENIKEHLIVELYSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (19.9%) GO:0042274 (19.9%)" "GO:0015935 (19.9%) GO:0005840 (0.3%) GO:1990904 (0.2%)" "GO:0019843 (20%) GO:0003735 (19.9%)" "translation (19.9%) ribosomal small subunit biogenesis (19.9%)" "small ribosomal subunit (19.9%) ribosome (0.3%) ribonucleoprotein complex (0.2%)" "rRNA binding (20%) structural constituent of ribosome (19.9%)" "IPR002942 (16.8%) IPR001912 (16.6%) IPR005709 (16.6%)" "RNA-binding S4 domain (16.8%) Small ribosomal subunit protein uS4, N-terminal (16.6%) Small ribosomal subunit protein uS4, bacteria (16.6%)" KLNIKPGQTTFDGR root "1.6.5.9 (50%) 1.6.5.11 (37.5%) 7.1.1.- (7.5%)" "NADH:ubiquinone reductase (non-electrogenic) (50%) Transferred entry: 1.6.5.9 (37.5%) Hydron translocation or charge separation linked to oxidoreductase reactions (7.5%)" "GO:0015980 (0.1%) GO:0022904 (0.1%) GO:1902600 (0.1%)" "GO:0005886 (0.2%) GO:0030964 (0.2%) GO:0016020 (0.1%)" "GO:0046872 (24.5%) GO:0051537 (24.5%) GO:0048038 (24.4%)" "energy derivation by oxidation of organic compounds (0.1%) respiratory electron transport chain (0.1%) proton transmembrane transport (0.1%)" "plasma membrane (0.2%) NADH dehydrogenase complex (0.2%) membrane (0.1%)" "metal ion binding (24.5%) 2 iron, 2 sulfur cluster binding (24.5%) quinone binding (24.4%)" "IPR002023 (24.7%) IPR036249 (24.7%) IPR042128 (24.7%)" "NADH-quinone oxidoreductase subunit E-like (24.7%) Thioredoxin-like superfamily (24.7%) NuoE domain (24.7%)" AANKFPAIIYGGK root "GO:0006412 (24.4%) GO:0000027 (0.2%) GO:0002181 (0.2%)" "GO:0022625 (24%) GO:0005840 (1%) GO:1990904 (0.6%)" "GO:0003735 (24.6%) GO:0008097 (24.2%)" "translation (24.4%) ribosomal large subunit assembly (0.2%) cytoplasmic translation (0.2%)" "cytosolic large ribosomal subunit (24%) ribosome (1%) ribonucleoprotein complex (0.6%)" "structural constituent of ribosome (24.6%) 5S rRNA binding (24.2%)" "IPR011035 (20.2%) IPR020056 (20.2%) IPR029751 (20.2%)" "Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (20.2%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (20.2%) Large ribosomal subunit protein bL25, L25 domain (20.2%)" VNCKIDYTVANFDVEQGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" NLNEVVSFNPTAENIAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "4.-.-.- (66.7%) 4.1.2.50 (33.3%)" "Lyases (66.7%) 6-carboxytetrahydropterin synthase (33.3%)" GO:0008616 (25%) "GO:0046872 (37.5%) GO:0070497 (34.4%) GO:0016829 (3.1%)" tRNA queuosine(34) biosynthetic process (25%) "metal ion binding (37.5%) 6-carboxytetrahydropterin synthase activity (34.4%) lyase activity (3.1%)" "IPR007115 (50%) IPR038418 (50%)" "6-pyruvoyl tetrahydropterin synthase/QueD family (50%) 6-pyruvoyl tetrahydropterin synthase/QueD superfamily (50%)" VGLVAVHLYRPF Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (69.2%) 1.2.7.- (23.1%) 1.2.1.51 (7.7%)" "pyruvate synthase (69.2%) With an iron-sulfur protein as acceptor (23.1%) pyruvate dehydrogenase (NADP(+)) (7.7%)" "GO:0006979 (15.2%) GO:0022900 (14.4%) GO:0044281 (10.6%)" "GO:0051539 (15.2%) GO:0005506 (14.4%) GO:0030976 (14%)" "response to oxidative stress (15.2%) electron transport chain (14.4%) small molecule metabolic process (10.6%)" "4 iron, 4 sulfur cluster binding (15.2%) iron ion binding (14.4%) thiamine pyrophosphate binding (14%)" "IPR002880 (8%) IPR009014 (8%) IPR029061 (8%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (8%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (8%) Thiamin diphosphate-binding fold (8%)" TIGLVPTMGALHAGHASLVKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.2.1 (100%) pantoate--beta-alanine ligase (AMP-forming) (100%) GO:0015940 (25%) GO:0005829 (25%) "GO:0004592 (25%) GO:0005524 (25%)" pantothenate biosynthetic process (25%) cytosol (25%) "pantoate-beta-alanine ligase activity (25%) ATP binding (25%)" "IPR003721 (33.3%) IPR014729 (33.3%) IPR042176 (33.3%)" "Pantoate-beta-alanine ligase (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (33.3%) Pantoate-beta-alanine ligase, C-terminal domain (33.3%)" LNLEKEQPFGTTFDKLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.7%) GO:0006516 (19.7%)" GO:0005829 (18.1%) "GO:0000224 (19.7%) GO:0030246 (19.7%) GO:0016798 (3.1%)" "carbohydrate metabolic process (19.7%) glycoprotein catabolic process (19.7%)" cytosol (18.1%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.7%) carbohydrate binding (19.7%) hydrolase activity, acting on glycosyl bonds (3.1%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" HVMYADEAALIGPAASK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.14 (100%) biotin carboxylase (100%) GO:2001295 (12.5%) "GO:0005524 (25%) GO:0046872 (25%) GO:0003989 (12.5%)" malonyl-CoA biosynthetic process (12.5%) "ATP binding (25%) metal ion binding (25%) acetyl-CoA carboxylase activity (12.5%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" QGNEFGATTGR root 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.6%) GO:0046040 (16.6%) GO:0006164 (0%)" "GO:0005737 (16.5%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0004019 (16.6%) GO:0005525 (16.5%) GO:0000287 (15%)" "'de novo' AMP biosynthetic process (16.6%) IMP metabolic process (16.6%) purine nucleotide biosynthetic process (0%)" "cytoplasm (16.5%) cytosol (0%) membrane (0%)" "adenylosuccinate synthase activity (16.6%) GTP binding (16.5%) magnesium ion binding (15%)" "IPR001114 (14.9%) IPR027417 (14.9%) IPR042111 (14.9%)" "Adenylosuccinate synthetase (14.9%) P-loop containing nucleoside triphosphate hydrolase (14.9%) Adenylosuccinate synthetase, domain 3 (14.9%)" GPGENYIDR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.2%) IPR006101 (7.2%) IPR006103 (7.2%)" "Beta galactosidase small chain/ domain 5 (7.2%) Glycoside hydrolase, family 2 (7.2%) Glycoside hydrolase family 2, catalytic domain (7.2%)" LIGAPPGYVGYDEGGQLTEAVR root 3.4.21.92 (100%) endopeptidase Clp (100%) "GO:0034605 (19.1%) GO:0042026 (16.6%) GO:0006508 (3.2%)" "GO:0005737 (19.1%) GO:0005829 (0%)" "GO:0005524 (19.2%) GO:0016887 (19.2%) GO:0008233 (3.2%)" "cellular response to heat (19.1%) protein refolding (16.6%) proteolysis (3.2%)" "cytoplasm (19.1%) cytosol (0%)" "ATP binding (19.2%) ATP hydrolysis activity (19.2%) peptidase activity (3.2%)" "IPR003959 (8.6%) IPR050130 (8.6%) IPR001270 (8.6%)" "ATPase, AAA-type, core (8.6%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%) ClpA/B family (8.6%)" STLIAAQEYEDGKVYYKNPAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (25%) GO:0000428 (25%) "GO:0003677 (25%) GO:0003899 (25%)" DNA-templated transcription (25%) DNA-directed RNA polymerase complex (25%) "DNA binding (25%) DNA-directed RNA polymerase activity (25%)" "IPR006110 (50%) IPR036161 (50%)" "RNA polymerase, subunit omega/Rpo6/RPB6 (50%) RPB6/omega subunit-like superfamily (50%)" TFDVNLFTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001383 (24.8%) IPR026569 (24.8%) IPR034704 (24.8%)" "Large ribosomal subunit protein bL28, bacteria (24.8%) Large ribosomal subunit protein bL28 (24.8%) Large ribosomal subunit protein bL28/bL31-like superfamily (24.8%)" IKSSSALQEQISK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.4.21.107 (66.7%) 3.4.21.- (33.3%)" "peptidase Do (66.7%) Serine endopeptidases (33.3%)" GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001478 (17%) IPR001940 (17%) IPR009003 (17%)" "PDZ domain (17%) Peptidase S1C (17%) Peptidase S1, PA clan (17%)" HSVVFDEAENR root "2.1.3.3 (99.8%) 2.7.2.2 (0.1%) 3.5.3.6 (0.1%)" "ornithine carbamoyltransferase (99.8%) carbamate kinase (0.1%) arginine deiminase (0.1%)" "GO:0019240 (20%) GO:0042450 (20%) GO:0006526 (0.1%)" "GO:0005737 (19.5%) GO:0005829 (0%)" "GO:0016597 (20.1%) GO:0004585 (20%) GO:0016743 (0.1%)" "citrulline biosynthetic process (20%) L-arginine biosynthetic process via ornithine (20%) L-arginine biosynthetic process (0.1%)" "cytoplasm (19.5%) cytosol (0%)" "amino acid binding (20.1%) ornithine carbamoyltransferase activity (20%) carboxyl- or carbamoyltransferase activity (0.1%)" "IPR006131 (16.8%) IPR036901 (16.8%) IPR006130 (16.7%)" "Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (16.8%) Aspartate/ornithine carbamoyltransferase superfamily (16.8%) Aspartate/ornithine carbamoyltransferase (16.7%)" SGLPQAALNYIK root 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.6%) GO:0046040 (16.6%) GO:0006164 (0.1%)" "GO:0005737 (16.6%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0004019 (16.6%) GO:0005525 (16.6%) GO:0000287 (16.3%)" "'de novo' AMP biosynthetic process (16.6%) IMP metabolic process (16.6%) purine nucleotide biosynthetic process (0.1%)" "cytoplasm (16.6%) cytosol (0%) membrane (0%)" "adenylosuccinate synthase activity (16.6%) GTP binding (16.6%) magnesium ion binding (16.3%)" "IPR001114 (14.6%) IPR027417 (14.6%) IPR042111 (14.6%)" "Adenylosuccinate synthetase (14.6%) P-loop containing nucleoside triphosphate hydrolase (14.6%) Adenylosuccinate synthetase, domain 3 (14.6%)" TATAEQAQEIHAFIR Bacteroidota Bacteria Pseudomonadati Bacteroidota 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0019563 (16.6%)" GO:0005829 (16.6%) "GO:0004807 (16.6%) GO:0016853 (0.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) glycerol catabolic process (16.6%)" cytosol (16.6%) "triose-phosphate isomerase activity (16.6%) isomerase activity (0.6%)" "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" GEVVINSSILDDKVLYK Bacteria Bacteria 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.8%) GO:0005829 (16.8%) "GO:0004818 (16.8%) GO:0005524 (16.8%) GO:0000049 (16.4%)" glutamyl-tRNA aminoacylation (16.8%) cytosol (16.8%) "glutamate-tRNA ligase activity (16.8%) ATP binding (16.8%) tRNA binding (16.4%)" "IPR014729 (9.7%) IPR020058 (9.7%) IPR049940 (9.7%)" "Rossmann-like alpha/beta/alpha sandwich fold (9.7%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (9.7%) Glutamyl-Q tRNA(Asp) synthetase/Glutamate--tRNA ligase (9.7%)" NFDKYAGQDIVSNASCTTNCLAPLAK root "1.2.1.- (78.4%) 1.2.1.12 (21.6%)" "With NAD(+) or NADP(+) as acceptor (78.4%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (21.6%)" "GO:0006006 (17.9%) GO:0072524 (17.6%) GO:0006096 (1.3%)" "GO:0005737 (1%) GO:0005576 (0.1%) GO:0005829 (0.1%)" "GO:0051287 (21.1%) GO:0050661 (17.9%) GO:0004365 (14.4%)" "glucose metabolic process (17.9%) pyridine-containing compound metabolic process (17.6%) glycolytic process (1.3%)" "cytoplasm (1%) extracellular region (0.1%) cytosol (0.1%)" "NAD binding (21.1%) NADP binding (17.9%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (14.4%)" "IPR020829 (17.3%) IPR020830 (17.3%) IPR020831 (17.3%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.3%) Glyceraldehyde 3-phosphate dehydrogenase, active site (17.3%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.3%)" AKIAEITWEQVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (14.3%) IPR006519 (14.3%) IPR020783 (14.3%)" "Ribosomal protein uL11 (14.3%) Large ribosomal subunit protein uL11, bacteria (14.3%) Large ribosomal subunit protein uL11, C-terminal (14.3%)" FKELTTGHAVIMGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.5.1.3 (100%) dihydrofolate reductase (100%) "GO:0006730 (14.1%) GO:0046452 (14.1%) GO:0046654 (14.1%)" GO:0005829 (14.1%) "GO:0004146 (14.1%) GO:0050661 (12.8%) GO:0016301 (1.3%)" "one-carbon metabolic process (14.1%) dihydrofolate metabolic process (14.1%) tetrahydrofolate biosynthetic process (14.1%)" cytosol (14.1%) "dihydrofolate reductase activity (14.1%) NADP binding (12.8%) kinase activity (1.3%)" "IPR001796 (33.3%) IPR012259 (33.3%) IPR024072 (33.3%)" "Dihydrofolate reductase domain (33.3%) Dihydrofolate reductase (33.3%) Dihydrofolate reductase-like domain superfamily (33.3%)" GVTIAAGGFFGPQGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.2.3 (100%) uridine phosphorylase (100%) GO:0006152 (33.1%) GO:0005829 (33.1%) "GO:0004731 (33.1%) GO:0004850 (0.8%)" purine nucleoside catabolic process (33.1%) cytosol (33.1%) "purine-nucleoside phosphorylase activity (33.1%) uridine phosphorylase activity (0.8%)" "IPR000845 (50%) IPR035994 (50%)" "Nucleoside phosphorylase domain (50%) Nucleoside phosphorylase superfamily (50%)" MDINQIMTSLEAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (25.4%) GO:0005829 (25.4%) "GO:0004354 (25.4%) GO:0000166 (23.8%)" glutamate biosynthetic process (25.4%) cytosol (25.4%) "glutamate dehydrogenase (NADP+) activity (25.4%) nucleotide binding (23.8%)" "IPR006097 (11.5%) IPR033524 (11.5%) IPR046346 (11.5%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.5%) Leu/Phe/Val dehydrogenases active site (11.5%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.5%)" TTDDLPEVIYAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" KAVNNGEIAYNDIHLSQMAQEVR Pseudomonadati Bacteria Pseudomonadati "2.8.3.- (91.9%) 3.1.2.1 (8.1%)" "CoA-transferases (91.9%) acetyl-CoA hydrolase (8.1%)" "GO:0006083 (25%) GO:0006084 (24.8%)" "GO:0003986 (25%) GO:0008775 (25%) GO:0016740 (0.2%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (24.8%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%) transferase activity (0.2%)" "IPR003702 (16.7%) IPR037171 (16.7%) IPR046433 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) NagB/RpiA transferase-like (16.7%) Acetyl-CoA hydrolase/transferase (16.7%)" IVIFDWVNSNEEENAFNKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis KTFESLPVAPLPNRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.5.1.3 (100%) dihydrofolate reductase (100%) "GO:0006730 (14%) GO:0046452 (14%) GO:0046654 (14%)" GO:0005829 (14%) "GO:0004146 (14%) GO:0050661 (14%) GO:0016301 (1.8%)" "one-carbon metabolic process (14%) dihydrofolate metabolic process (14%) tetrahydrofolate biosynthetic process (14%)" cytosol (14%) "dihydrofolate reductase activity (14%) NADP binding (14%) kinase activity (1.8%)" "IPR001796 (33.3%) IPR012259 (33.3%) IPR024072 (33.3%)" "Dihydrofolate reductase domain (33.3%) Dihydrofolate reductase (33.3%) Dihydrofolate reductase-like domain superfamily (33.3%)" NGVLAGYPLDKLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" VNELVEAMCVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006508 (5.3%) GO:0005737 (89.5%) GO:0008233 (5.3%) proteolysis (5.3%) cytoplasm (89.5%) peptidase activity (5.3%) "IPR002818 (25%) IPR006287 (25%) IPR029062 (25%)" "DJ-1/PfpI (25%) Protein/nucleic acid deglycase DJ-1 (25%) Class I glutamine amidotransferase-like (25%)" VYLFEEMRPTPEMSFAIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.2.2 (66.7%) 5.4.2.- (33.3%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (66.7%) Phosphotransferases (phosphomutases) (33.3%)" "GO:0005975 (24.3%) GO:0006166 (24.3%)" "GO:0000287 (24.3%) GO:0008973 (24.3%) GO:0004614 (2.9%)" "carbohydrate metabolic process (24.3%) purine ribonucleoside salvage (24.3%)" "magnesium ion binding (24.3%) phosphopentomutase activity (24.3%) phosphoglucomutase activity (2.9%)" "IPR005844 (13.8%) IPR016055 (13.8%) IPR016066 (13.8%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (13.8%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (13.8%) Alpha-D-phosphohexomutase, conserved site (13.8%)" ETPAPIDGFTNEQR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.24.- (100%) Metalloendopeptidases (100%) GO:0016485 (25%) GO:0005886 (25%) "GO:0004222 (25%) GO:0046872 (25%)" protein processing (25%) plasma membrane (25%) "metalloendopeptidase activity (25%) metal ion binding (25%)" "IPR000718 (20%) IPR008753 (20%) IPR018497 (20%)" "Peptidase M13 (20%) Peptidase M13, N-terminal domain (20%) Peptidase M13, C-terminal domain (20%)" IIKDAQTANIMFLIQQANLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" NIACLTIAPTGTTSIMTQTSSGIEPVFLPVYKR GIISPVQIAGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) GO:0004565 (50%) carbohydrate metabolic process (50%) beta-galactosidase activity (50%) "IPR001944 (12.5%) IPR008979 (12.5%) IPR017853 (12.5%)" "Glycoside hydrolase, family 35 (12.5%) Galactose-binding-like domain superfamily (12.5%) Glycoside hydrolase superfamily (12.5%)" GEEQLFEQFRPNVEVVVNAQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (10.6%) GO:0008564 (0.5%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (10.6%) protein-exporting ATPase activity (0.5%)" "IPR000185 (7.8%) IPR011115 (7.8%) IPR011130 (7.8%)" "Protein translocase subunit SecA (7.8%) SecA DEAD-like, N-terminal (7.8%) SecA, preprotein cross-linking domain (7.8%)" ENQLLEDTDPNKFIAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" VYTFGNGLAEGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" QLYGESEGKDGK root 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.2%) GO:0006096 (14.2%) GO:0051156 (14.2%)" GO:0005829 (14.2%) "GO:0004347 (14.2%) GO:0048029 (14.2%) GO:0097367 (14.2%)" "gluconeogenesis (14.2%) glycolytic process (14.2%) glucose 6-phosphate metabolic process (14.2%)" cytosol (14.2%) "glucose-6-phosphate isomerase activity (14.2%) monosaccharide binding (14.2%) carbohydrate derivative binding (14.2%)" "IPR001672 (19.9%) IPR018189 (19.9%) IPR035476 (19.9%)" "Phosphoglucose isomerase (PGI) (19.9%) Phosphoglucose isomerase, conserved site (19.9%) Phosphoglucose isomerase, SIS domain 1 (19.9%)" DAVAATSTQILQGITR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) GO:0000428 (16.8%) "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0000287 (16.3%)" DNA-templated transcription (16.8%) DNA-directed RNA polymerase complex (16.8%) "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) magnesium ion binding (16.3%)" "IPR007081 (9.3%) IPR007083 (9.2%) IPR045867 (9.2%)" "RNA polymerase Rpb1, domain 5 (9.3%) RNA polymerase Rpb1, domain 4 (9.2%) DNA-directed RNA polymerase, subunit beta-prime (9.2%)" TMIEMVPWMPVQYDGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.5%) IPR008969 (12.5%) IPR012910 (12.5%)" "TonB-dependent receptor-like, beta-barrel (12.5%) Carboxypeptidase-like, regulatory domain superfamily (12.5%) TonB-dependent receptor, plug domain (12.5%)" VSFTADQIRDNAKEFIATIIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (17%) GO:0006417 (16.1%)" GO:0015934 (17%) "GO:0003735 (17%) GO:0019843 (17%) GO:0000049 (16.1%)" "translation (17%) regulation of translation (16.1%)" large ribosomal subunit (17%) "structural constituent of ribosome (17%) rRNA binding (17%) tRNA binding (16.1%)" "IPR002143 (16.7%) IPR005878 (16.7%) IPR016095 (16.7%)" "Large ribosomal subunit protein uL1 (16.7%) Large ribosomal subunit protein uL1, bacteria (16.7%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" IAHSFPDKTPDHR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" VGEGIVSSIGSSENHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005886 (51.5%) GO:0045121 (48.5%)" "plasma membrane (51.5%) membrane raft (48.5%)" IPR022853 (100%) Flotillin-like protein FloA (100%) KYGVEYDVSFSEQKPSTDTVAADMENKPFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.22 (100%) ribosylnicotinamide kinase (100%) "GO:0016301 (66.7%) GO:0050262 (33.3%)" "kinase activity (66.7%) ribosylnicotinamide kinase activity (33.3%)" "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" TTEIRPIWCEVGYLPGPHGSAIFTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (7.8%) IPR012162 (7.8%) IPR015847 (7.8%)" "Exoribonuclease, phosphorolytic domain 1 (7.8%) Polyribonucleotide nucleotidyltransferase (7.8%) Exoribonuclease, phosphorolytic domain 2 (7.8%)" VTIHGWAYGIHDGLLR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.2.1.1 (100%) carbonic anhydrase (100%) "GO:0015976 (32.6%) GO:0051289 (0.2%)" GO:0005829 (0.2%) "GO:0004089 (33.3%) GO:0008270 (33.3%) GO:0016829 (0.4%)" "carbon utilization (32.6%) protein homotetramerization (0.2%)" cytosol (0.2%) "carbonate dehydratase activity (33.3%) zinc ion binding (33.3%) lyase activity (0.4%)" "IPR036874 (33.7%) IPR001765 (33.5%) IPR015892 (32.8%)" "Carbonic anhydrase superfamily (33.7%) Carbonic anhydrase (33.5%) Carbonic anhydrase, prokaryotic-like, conserved site (32.8%)" ALNLDAIHDTVHEMAKDEAR Bacteria Bacteria 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (49.1%) GO:0004601 (22.8%) GO:0016491 (19.3%)" "iron ion binding (49.1%) peroxidase activity (22.8%) oxidoreductase activity (19.3%)" "IPR052773 (13.3%) IPR009078 (13.2%) IPR012347 (12.6%)" "Anaerobic Bacterial Peroxidase-Related (13.3%) Ferritin-like superfamily (13.2%) Ferritin-like (12.6%)" ALAINPDYIESLSNLGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" EGGYGNSRPSYGNNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" PAQAQAVHK root 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0019563 (16.6%)" "GO:0005829 (16.6%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0004807 (16.6%) GO:0016853 (0.2%) GO:0042802 (0%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) glycerol catabolic process (16.6%)" "cytosol (16.6%) cytoplasm (0%) membrane (0%)" "triose-phosphate isomerase activity (16.6%) isomerase activity (0.2%) identical protein binding (0%)" "IPR000652 (20.1%) IPR013785 (20.1%) IPR035990 (20.1%)" "Triosephosphate isomerase (20.1%) Aldolase-type TIM barrel (20.1%) Triosephosphate isomerase superfamily (20.1%)" VTKEGVITVEEAK Pseudomonadati Bacteria Pseudomonadati 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (18.9%) GO:0005737 (12.2%) "GO:0005524 (18.9%) GO:0016853 (18.9%) GO:0140662 (18.9%)" protein refolding (18.9%) cytoplasm (12.2%) "ATP binding (18.9%) isomerase activity (18.9%) ATP-dependent protein folding chaperone (18.9%)" "IPR001844 (17.5%) IPR002423 (17.5%) IPR027409 (17.5%)" "Chaperonin Cpn60/GroEL (17.5%) Chaperonin Cpn60/GroEL/TCP-1 family (17.5%) GroEL-like apical domain superfamily (17.5%)" AFLEENKKRPNVVTLPSGLQYEVITEGTGKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" VNHKDYATER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022627 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000589 (33.3%) IPR005290 (33.3%) IPR009068 (33.3%)" "Small ribosomal subunit protein uS15 (33.3%) Small ribosomal subunit protein uS15, bacteria (33.3%) uS15/NS1, RNA-binding domain superfamily (33.3%)" NGECFADKINDTFEGAIDDCVEALEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR003489 (50%) IPR036567 (50%)" "Ribosome hibernation promoting factor/RaiA (50%) Ribosome hibernation promotion factor-like (50%)" SGNKEELAILR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR002130 (25.6%) IPR020892 (25.6%) IPR044666 (25.6%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (25.6%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (25.6%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like (25.6%)" FYNYPTQVLAASIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.2.1.2 (94.7%) 4.1.2.- (5.3%)" "transaldolase (94.7%) Aldehyde-lyases (5.3%)" "GO:0005975 (17%) GO:0006098 (17%) GO:0042182 (15.1%)" GO:0005737 (17%) "GO:0004801 (17%) GO:0016832 (17%)" "carbohydrate metabolic process (17%) pentose-phosphate shunt (17%) ketone catabolic process (15.1%)" cytoplasm (17%) "transaldolase activity (17%) aldehyde-lyase activity (17%)" "IPR001585 (16.7%) IPR004731 (16.7%) IPR013785 (16.7%)" "Transaldolase/Fructose-6-phosphate aldolase (16.7%) Transaldolase type 3B/Fructose-6-phosphate aldolase (16.7%) Aldolase-type TIM barrel (16.7%)" VCQGETMSMDLTEPDAGSDLQSVMLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.99.- (100%) With other acceptors (100%) "GO:0050660 (50%) GO:0003995 (45.2%) GO:0016627 (3.2%)" "flavin adenine dinucleotide binding (50%) acyl-CoA dehydrogenase activity (45.2%) oxidoreductase activity, acting on the CH-CH group of donors (3.2%)" "IPR009100 (9.4%) IPR013786 (9.4%) IPR037069 (9.4%)" "Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily (9.4%) Acyl-CoA dehydrogenase/oxidase, N-terminal (9.4%) Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily (9.4%)" ATDGQVKFPAWSPYL Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0051301 (33%) GO:0017038 (32.9%) GO:0015031 (0.1%)" "GO:0042597 (33%) GO:0016020 (0.1%) GO:0030288 (0.1%)" "GO:0016787 (0.3%) GO:0019904 (0.1%) GO:0044877 (0.1%)" "cell division (33%) protein import (32.9%) protein transport (0.1%)" "periplasmic space (33%) membrane (0.1%) outer membrane-bounded periplasmic space (0.1%)" "hydrolase activity (0.3%) protein domain specific binding (0.1%) protein-containing complex binding (0.1%)" "IPR011042 (25.3%) IPR011659 (25.2%) IPR014167 (24.8%)" "Six-bladed beta-propeller, TolB-like (25.3%) WD40-like beta-propeller (25.2%) Tol-Pal system protein TolB (24.8%)" KALTESDGDIEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" KYTQQYPIDSDHPTTVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) GO:0071897 (25%) "GO:0000166 (25%) GO:0004748 (25%) GO:0031419 (25%)" DNA biosynthetic process (25%) "nucleotide binding (25%) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (25%) cobalamin binding (25%)" "IPR000788 (33.3%) IPR013344 (33.3%) IPR050862 (33.3%)" "Ribonucleotide reductase large subunit, C-terminal (33.3%) Ribonucleotide reductase, adenosylcobalamin-dependent (33.3%) Ribonucleoside diphosphate reductase class-2 (33.3%)" LKVQAQIQGDEIR root "GO:0006974 (0.4%) GO:0042542 (0.4%)" GO:0005829 (48.8%) "GO:0000166 (48.8%) GO:0000049 (0.4%) GO:0005524 (0.4%)" "DNA damage response (0.4%) response to hydrogen peroxide (0.4%)" cytosol (48.8%) "nucleotide binding (48.8%) tRNA binding (0.4%) ATP binding (0.4%)" "IPR007551 (25.4%) IPR035571 (25.4%) IPR036183 (25.4%)" "Nucleotide-binding protein YajQ/Smlt4090-like (25.4%) UPF0234-like, C-terminal (25.4%) YajQ-like superfamily (25.4%)" TMFDYKLEPEVYNFHLLDALIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.1.1.1 (100%) alanine racemase (100%) "GO:0030632 (19.8%) GO:0009252 (0.2%)" GO:0005829 (0.2%) "GO:0005524 (19.8%) GO:0008784 (19.8%) GO:0030170 (19.8%)" "D-alanine biosynthetic process (19.8%) peptidoglycan biosynthetic process (0.2%)" cytosol (0.2%) "ATP binding (19.8%) alanine racemase activity (19.8%) pyridoxal phosphate binding (19.8%)" "IPR000821 (10%) IPR001608 (10%) IPR009006 (10%)" "Alanine racemase (10%) Alanine racemase, N-terminal (10%) Alanine racemase/group IV decarboxylase, C-terminal (10%)" LGKEVMVFVYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (24.9%) GO:0044208 (24.9%) GO:0006188 (5.6%)" "GO:0004018 (30.6%) GO:0070626 (13.2%) GO:0016829 (0.5%)" "'de novo' IMP biosynthetic process (24.9%) 'de novo' AMP biosynthetic process (24.9%) IMP biosynthetic process (5.6%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (30.6%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (13.2%) lyase activity (0.5%)" "IPR000362 (12.5%) IPR008948 (12.5%) IPR022761 (12.5%)" "Fumarate lyase family (12.5%) L-Aspartase-like (12.5%) Fumarate lyase, N-terminal (12.5%)" TLTTDTIIANSR Pseudomonadati Bacteria Pseudomonadati 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (13.3%) GO:0005737 (0.9%)" "GO:0004342 (14.3%) GO:0042802 (14.3%) GO:0016853 (0.2%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (13.3%) cytoplasm (0.9%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%) isomerase activity (0.2%)" "IPR004547 (25%) IPR006148 (25%) IPR037171 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) NagB/RpiA transferase-like (25%)" TLADQEGYKTFIIPDNVGGR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" AITPADIQAQTFSEAK Coriobacteriaceae Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae GO:0051301 (50%) GO:0005737 (50%) cell division (50%) cytoplasm (50%) "IPR007793 (50%) IPR019933 (50%)" "DivIVA family (50%) DivIVA domain (50%)" IMIDPELAGVEIEHKVEEAPVTTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" LGGIVFTPDEVLNALKEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.7.1 (60%) 1.2.7.11 (20%) 1.2.7.3 (20%)" "pyruvate synthase (60%) 2-oxoacid oxidoreductase (ferredoxin) (20%) 2-oxoglutarate synthase (20%)" "GO:0016491 (72.7%) GO:0019164 (27.3%)" "oxidoreductase activity (72.7%) pyruvate synthase activity (27.3%)" "IPR002880 (20%) IPR009014 (20%) IPR029061 (20%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%) Thiamin diphosphate-binding fold (20%)" VQAQIQGDEIR root "GO:0006974 (0.4%) GO:0042542 (0.4%)" GO:0005829 (48.8%) "GO:0000166 (48.8%) GO:0000049 (0.4%) GO:0005524 (0.4%)" "DNA damage response (0.4%) response to hydrogen peroxide (0.4%)" cytosol (48.8%) "nucleotide binding (48.8%) tRNA binding (0.4%) ATP binding (0.4%)" "IPR007551 (25.4%) IPR035571 (25.4%) IPR036183 (25.4%)" "Nucleotide-binding protein YajQ/Smlt4090-like (25.4%) UPF0234-like, C-terminal (25.4%) YajQ-like superfamily (25.4%)" ILPVIITYYADK Pseudomonadati Bacteria Pseudomonadati GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.3%)" "GO:0003735 (24.9%) GO:0070180 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.3%)" "structural constituent of ribosome (24.9%) large ribosomal subunit rRNA binding (24.9%)" "IPR000911 (14.9%) IPR020783 (14.9%) IPR020784 (14.9%)" "Ribosomal protein uL11 (14.9%) Large ribosomal subunit protein uL11, C-terminal (14.9%) Large ribosomal subunit protein uL11, N-terminal (14.9%)" LINILPSGGWENVLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003959 (33.3%) IPR027417 (33.3%) IPR051396 (33.3%)" "ATPase, AAA-type, core (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%) Bacterial Antiviral Defense Nuclease (33.3%)" YIGELEYLNDPSVPMR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR021428 (100%) Protein of unknown function DUF3078 (100%) INALETVTIASK root "GO:0006412 (19.9%) GO:0002181 (0%)" "GO:0005840 (20.2%) GO:1990904 (19.8%) GO:0022625 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.9%) GO:0070180 (0%)" "translation (19.9%) cytoplasmic translation (0%)" "ribosome (20.2%) ribonucleoprotein complex (19.8%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%) large ribosomal subunit rRNA binding (0%)" "IPR020594 (14.4%) IPR000244 (14.3%) IPR020069 (14.3%)" "Large ribosomal subunit protein bL9, bacteria/chloroplast (14.4%) Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9, C-terminal (14.3%)" ENDEPKLQTIGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0034605 (19.6%) GO:0042026 (19.6%) GO:0006508 (1.1%)" GO:0005737 (19.6%) "GO:0005524 (19.6%) GO:0016887 (19.6%) GO:0008233 (1.1%)" "cellular response to heat (19.6%) protein refolding (19.6%) proteolysis (1.1%)" cytoplasm (19.6%) "ATP binding (19.6%) ATP hydrolysis activity (19.6%) peptidase activity (1.1%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" FGVAQPNIQALEGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006605 (19.6%) GO:0043952 (19.6%) GO:0065002 (19.6%)" GO:0005886 (20.6%) GO:0015450 (19.6%) "protein targeting (19.6%) protein transport by the Sec complex (19.6%) intracellular protein transmembrane transport (19.6%)" plasma membrane (20.6%) protein-transporting ATPase activity (19.6%) "IPR022813 (11.6%) IPR048631 (11.6%) IPR005665 (11%)" "Protein-export membrane protein SecD/SecF, archaeal and bacterial (11.6%) Protein translocase subunit SecDF, P1 domain, N-terminal (11.6%) Protein-export membrane protein SecF, bacterial (11%)" NKPATLSTGLVIQVPEYLSPGEK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota GO:0043043 (33%) "GO:0005829 (33%) GO:0005737 (0.4%)" GO:0003746 (33.7%) peptide biosynthetic process (33%) "cytosol (33%) cytoplasm (0.4%)" translation elongation factor activity (33.7%) "IPR012340 (11.5%) IPR013852 (11.5%) IPR015365 (11.5%)" "Nucleic acid-binding, OB-fold (11.5%) Translation elongation factor P/YeiP, conserved site (11.5%) Elongation factor P, C-terminal (11.5%)" TVCNNVIGFLEGDRPVSR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.1.1.- (50%) 1.1.1.26 (25%) 1.1.1.290 (25%)" "With NAD(+) or NADP(+) as acceptor (50%) glyoxylate reductase (25%) 4-phosphoerythronate dehydrogenase (25%)" GO:0008652 (27.2%) GO:0005829 (4.3%) "GO:0051287 (31.5%) GO:0016616 (27.2%) GO:0016618 (4.3%)" amino acid biosynthetic process (27.2%) cytosol (4.3%) "NAD binding (31.5%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (27.2%) hydroxypyruvate reductase [NAD(P)H] activity (4.3%)" "IPR006139 (16.7%) IPR006140 (16.7%) IPR029752 (16.7%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (16.7%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (16.7%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 (16.7%)" VKPGGILIYDGYGIHTPAKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0016903 (71.4%) GO:0019164 (28.6%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (71.4%) pyruvate synthase activity (28.6%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" EMDKYPEIKPNYVANYQDEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.5%) IPR002880 (12.5%) IPR009014 (12.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" ISSPILSQYDTAIILNQPSLEKFEGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0016903 (92.3%) GO:0019164 (7.7%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (92.3%) pyruvate synthase activity (7.7%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" AAMEHAAKGGFNVVIIDTAGR Roseburia yibonii Bacteria Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Roseburia Roseburia yibonii ILAIDPANATAKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0051301 (86.8%) GO:0016192 (2.6%)" "GO:0005737 (2.6%) GO:0009579 (2.6%) GO:0012505 (2.6%)" "cell division (86.8%) vesicle-mediated transport (2.6%)" "cytoplasm (2.6%) thylakoid (2.6%) endomembrane system (2.6%)" "IPR011990 (41.8%) IPR019734 (41.8%) IPR051685 (11.5%)" "Tetratricopeptide-like helical domain superfamily (41.8%) Tetratricopeptide repeat (41.8%) Ycf3/AcsC/BcsC/TPR Multifunctional (11.5%)" TSDSGVSIWLDDLSR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25.1%) GO:0006098 (24.9%)" GO:0005737 (24.9%) GO:0004801 (25.1%) "carbohydrate metabolic process (25.1%) pentose-phosphate shunt (24.9%)" cytoplasm (24.9%) transaldolase activity (25.1%) "IPR001585 (25.1%) IPR013785 (25.1%) IPR018225 (25.1%)" "Transaldolase/Fructose-6-phosphate aldolase (25.1%) Aldolase-type TIM barrel (25.1%) Transaldolase, active site (25.1%)" SLNYFVDATNVKDIHNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GYFYDALNQLIHSGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (3.8%) "GO:0000287 (19.2%) GO:0004743 (19.2%) GO:0005524 (19.2%)" response to stress (3.8%) "magnesium ion binding (19.2%) pyruvate kinase activity (19.2%) ATP binding (19.2%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" EASAVFSVPEHYKHDIR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" WSDGTPVTAQDFVYSWQR root "GO:0015833 (22.5%) GO:0015031 (11.8%) GO:0006857 (0.1%)" "GO:0030288 (22.3%) GO:0043190 (20.3%) GO:0016020 (0.2%)" "GO:1904680 (22.5%) GO:1900750 (0.1%)" "peptide transport (22.5%) protein transport (11.8%) oligopeptide transport (0.1%)" "outer membrane-bounded periplasmic space (22.3%) ATP-binding cassette (ABC) transporter complex (20.3%) membrane (0.2%)" "peptide transmembrane transporter activity (22.5%) oligopeptide binding (0.1%)" "IPR000914 (27.4%) IPR039424 (27.4%) IPR030678 (25%)" "Solute-binding protein family 5 domain (27.4%) Solute-binding protein family 5 (27.4%) Peptide/nickel binding protein, MppA-type (25%)" VAELTQQLDAAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR049273 (50%) IPR053996 (50%)" "DUF3829-like, N-terminal domain (50%) DUF3829-like, C-terminal domain (50%)" MIDMNVIVGSGYHINPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043200 (32.7%) GO:0005829 (32.7%) GO:0043565 (34.5%) response to amino acid (32.7%) cytosol (32.7%) sequence-specific DNA binding (34.5%) "IPR000485 (16.5%) IPR011008 (16.5%) IPR019887 (16.5%)" "AsnC-type HTH domain (16.5%) Dimeric alpha-beta barrel (16.5%) Transcription regulator AsnC/Lrp, ligand binding domain (16.5%)" FLFDLGIVCEEEPFKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.4 (100%) leucine--tRNA ligase (100%) GO:0006429 (20%) GO:0005829 (20%) "GO:0002161 (20%) GO:0004823 (20%) GO:0005524 (20%)" leucyl-tRNA aminoacylation (20%) cytosol (20%) "aminoacyl-tRNA deacylase activity (20%) leucine-tRNA ligase activity (20%) ATP binding (20%)" "IPR001412 (12.5%) IPR002302 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Leucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" AQVPGFRPGMVPMSLVKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.5%) GO:0043335 (16.5%) GO:0051083 (16.5%)" "GO:0003755 (16.5%) GO:0043022 (16.5%) GO:0044183 (16.5%)" "protein transport (16.5%) protein unfolding (16.5%) 'de novo' cotranslational protein folding (16.5%)" "peptidyl-prolyl cis-trans isomerase activity (16.5%) ribosome binding (16.5%) protein folding chaperone (16.5%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" MDQIPSKDSMPGSLYSDLAK Pseudomonadati Bacteria Pseudomonadati "3.6.3.14 (97.1%) 3.6.3.15 (2.9%)" "Transferred entry: 7.1.2.2 (97.1%) Transferred entry: 7.2.2.1 (2.9%)" "GO:0046034 (29.8%) GO:1902600 (29.8%) GO:0006811 (3.6%)" "GO:0005524 (33.3%) GO:0016787 (3.6%)" "ATP metabolic process (29.8%) proton transmembrane transport (29.8%) monoatomic ion transport (3.6%)" "ATP binding (33.3%) hydrolase activity (3.6%)" "IPR000194 (20.5%) IPR022879 (20.5%) IPR027417 (20.5%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.5%) V-type ATP synthase regulatory subunit B/beta (20.5%) P-loop containing nucleoside triphosphate hydrolase (20.5%)" VKVLDTTSK Bacteria Bacteria "GO:0016740 (98.2%) GO:0016491 (1.8%)" "transferase activity (98.2%) oxidoreductase activity (1.8%)" "IPR029044 (86%) IPR005835 (12%) IPR023753 (0.7%)" "Nucleotide-diphospho-sugar transferases (86%) Nucleotidyl transferase domain (12%) FAD/NAD(P)-binding domain (0.7%)" IESFGGIDIALLGIGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.4%) GO:0006044 (32.4%)" "GO:0004342 (32.4%) GO:0016853 (2.8%)" "carbohydrate metabolic process (32.4%) N-acetylglucosamine metabolic process (32.4%)" "glucosamine-6-phosphate deaminase activity (32.4%) isomerase activity (2.8%)" "IPR004547 (14.3%) IPR006148 (14.3%) IPR018321 (14.3%)" "Glucosamine-6-phosphate isomerase (14.3%) Glucosamine/galactosamine-6-phosphate isomerase (14.3%) Glucosamine-6-phosphate isomerase, conserved site (14.3%)" KVNQVYSECR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.-.- (100%) Acting on ester bonds (100%) "GO:0003676 (75%) GO:0016787 (25%)" "nucleic acid binding (75%) hydrolase activity (25%)" "IPR001667 (25%) IPR003156 (25%) IPR038763 (25%)" "DDH domain (25%) DHHA1 domain (25%) DHH phosphoesterase superfamily (25%)" EGDAVQLVGFGTFK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0030261 (11.3%) GO:0006270 (10.9%) GO:0006351 (10.9%)" "GO:0005829 (11.3%) GO:1990103 (10.9%) GO:1990178 (10.9%)" "GO:0003677 (11.4%) GO:0030527 (11.3%) GO:0042802 (10.9%)" "chromosome condensation (11.3%) DNA replication initiation (10.9%) DNA-templated transcription (10.9%)" "cytosol (11.3%) DnaA-HU complex (10.9%) HU-DNA complex (10.9%)" "DNA binding (11.4%) structural constituent of chromatin (11.3%) identical protein binding (10.9%)" "IPR000119 (33.5%) IPR010992 (33.5%) IPR020816 (33%)" "Histone-like DNA-binding protein (33.5%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.5%) Histone-like DNA-binding protein, conserved site (33%)" DMVDSAPSAIKEGIAKADAEALKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" TLHPDNMAAGPASYGMTDTMGR root IPR025964 (100%) GGGtGRT protein (100%) QVGELTIDELKLVLEEFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR013766 (50%) IPR036249 (50%)" "Thioredoxin domain (50%) Thioredoxin-like superfamily (50%)" SCACTTCHCIVR root "GO:0140647 (20.4%) GO:0022900 (0.1%) GO:0016226 (0.1%)" GO:0005829 (20.4%) "GO:0009055 (20.4%) GO:0051537 (20.4%) GO:0046872 (17.9%)" "P450-containing electron transport chain (20.4%) electron transport chain (0.1%) iron-sulfur cluster assembly (0.1%)" cytosol (20.4%) "electron transfer activity (20.4%) 2 iron, 2 sulfur cluster binding (20.4%) metal ion binding (17.9%)" "IPR001041 (16.7%) IPR012675 (16.7%) IPR036010 (16.7%)" "2Fe-2S ferredoxin-type iron-sulfur binding domain (16.7%) Beta-grasp domain superfamily (16.7%) 2Fe-2S ferredoxin-like superfamily (16.7%)" DMKNNQEYIATLTEGIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" AIIEFPAVAEILSLMK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.99.- (100%) With other acceptors (100%) "GO:0003995 (49.3%) GO:0050660 (49.3%) GO:0016937 (1.4%)" "acyl-CoA dehydrogenase activity (49.3%) flavin adenine dinucleotide binding (49.3%) short-chain fatty acyl-CoA dehydrogenase activity (1.4%)" "IPR006089 (9.3%) IPR009075 (9.3%) IPR036250 (9.3%)" "Acyl-CoA dehydrogenase, conserved site (9.3%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.3%) Acyl-CoA dehydrogenase-like, C-terminal (9.3%)" QLFADYGEITSAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003723 (100%) RNA binding (100%) "IPR000504 (20%) IPR012677 (20%) IPR035979 (20%)" "RNA recognition motif domain (20%) Nucleotide-binding alpha-beta plait domain superfamily (20%) RNA-binding domain superfamily (20%)" CVACNLCAVACPVGCISLQK root "7.1.1.- (86.5%) 1.6.5.9 (6.9%) 1.6.5.11 (6.2%)" "Hydron translocation or charge separation linked to oxidoreductase reactions (86.5%) NADH:ubiquinone reductase (non-electrogenic) (6.9%) Transferred entry: 1.6.5.9 (6.2%)" "GO:0009060 (16.6%) GO:0022904 (0%)" "GO:0005886 (16.6%) GO:0016020 (0.1%) GO:0045271 (0.1%)" "GO:0051539 (16.6%) GO:0048038 (16.6%) GO:0005506 (16.5%)" "aerobic respiration (16.6%) respiratory electron transport chain (0%)" "plasma membrane (16.6%) membrane (0.1%) respiratory chain complex I (0.1%)" "4 iron, 4 sulfur cluster binding (16.6%) quinone binding (16.6%) iron ion binding (16.5%)" "IPR017896 (33.3%) IPR017900 (33.3%) IPR010226 (33.3%)" "4Fe-4S ferredoxin-type, iron-sulphur binding domain (33.3%) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (33.3%) NADH-quinone oxidoreductase, chain I (33.3%)" MNISLQNVDKVSALLTLKLEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.5%) GO:0043335 (16.5%) GO:0051083 (16.5%)" "GO:0003755 (16.5%) GO:0043022 (16.5%) GO:0044183 (16.5%)" "protein transport (16.5%) protein unfolding (16.5%) 'de novo' cotranslational protein folding (16.5%)" "peptidyl-prolyl cis-trans isomerase activity (16.5%) ribosome binding (16.5%) protein folding chaperone (16.5%)" "IPR005215 (20.3%) IPR008881 (20.3%) IPR036611 (20.3%)" "Trigger factor (20.3%) Trigger factor, ribosome-binding, bacterial (20.3%) Trigger factor ribosome-binding domain superfamily (20.3%)" SHTTVLAIPENTPFNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006015 (48.6%) IPR006016 (48.6%) IPR014729 (2.9%)" "Universal stress protein A family (48.6%) UspA (48.6%) Rossmann-like alpha/beta/alpha sandwich fold (2.9%)" IVGWCAHRNEELNFEGKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.3.1 (100%) citrate (Si)-synthase (100%) "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (24.7%) "GO:0036440 (22.8%) GO:0046912 (2.2%) GO:0016746 (0.3%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (24.7%) "citrate synthase activity (22.8%) acyltransferase activity, acyl groups converted into alkyl on transfer (2.2%) acyltransferase activity (0.3%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" EFNIIAETGIHAR Lactobacillales Bacteria Bacillati Bacillota Bacilli Lactobacillales GO:0009401 (48.3%) GO:0005737 (48.3%) GO:0016740 (3.4%) phosphoenolpyruvate-dependent sugar phosphotransferase system (48.3%) cytoplasm (48.3%) transferase activity (3.4%) "IPR000032 (20%) IPR001020 (20%) IPR002114 (20%)" "Phosphocarrier protein HPr-like (20%) Phosphotransferase system, HPr histidine phosphorylation site (20%) Phosphotransferase system, HPr serine phosphorylation site (20%)" VLSGDQTGYAYVENVSLDEMLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006508 (33.3%) GO:0005829 (33.3%) GO:0008237 (33.3%) proteolysis (33.3%) cytosol (33.3%) metallopeptidase activity (33.3%) "IPR002510 (13.3%) IPR025502 (13.3%) IPR035068 (13.3%)" "Metalloprotease TldD/E, N-terminal domain (13.3%) TldD (13.3%) Metalloprotease TldD/PmbA, N-terminal (13.3%)" QTAITEKFPNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001014 (25%) IPR012677 (25%) IPR012678 (25%)" "Large ribosomal subunit protein uL23, conserved site (25%) Nucleotide-binding alpha-beta plait domain superfamily (25%) Ribosomal protein uL23/eL15/eS24 core domain superfamily (25%)" EGDFKDEILMLDTIAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.1.13.1 (95%) 3.1.-.- (5%)" "exoribonuclease II (95%) Acting on ester bonds (5%)" GO:0006402 (25%) GO:0005829 (25%) "GO:0003723 (25%) GO:0008859 (25%)" mRNA catabolic process (25%) cytosol (25%) "RNA binding (25%) exoribonuclease II activity (25%)" "IPR001900 (12.5%) IPR003029 (12.5%) IPR004476 (12.5%)" "Ribonuclease II/R (12.5%) S1 domain (12.5%) Ribonuclease II/ribonuclease R (12.5%)" QGDDVNPEKASSGCQFYIVTGR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (48.8%) GO:0003755 (51.2%) protein folding (48.8%) peptidyl-prolyl cis-trans isomerase activity (51.2%) "IPR002130 (25.3%) IPR029000 (25.3%) IPR044666 (25.3%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (25.3%) Cyclophilin-like domain superfamily (25.3%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like (25.3%)" MALMAAGIPCGTEVEVK Collinsella Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella 2.7.11.- (100%) Protein-serine/threonine kinases (100%) GO:0009401 (44.4%) GO:0005737 (44.4%) GO:0016740 (11.1%) phosphoenolpyruvate-dependent sugar phosphotransferase system (44.4%) cytoplasm (44.4%) transferase activity (11.1%) "IPR000032 (33.3%) IPR035895 (33.3%) IPR050399 (33.3%)" "Phosphocarrier protein HPr-like (33.3%) HPr-like superfamily (33.3%) Phosphocarrier protein HPr (33.3%)" VVESIANQAEAVGDKFEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (18.8%) GO:0005737 (12.5%) "GO:0005524 (18.8%) GO:0016853 (18.8%) GO:0140662 (18.8%)" protein refolding (18.8%) cytoplasm (12.5%) "ATP binding (18.8%) isomerase activity (18.8%) ATP-dependent protein folding chaperone (18.8%)" "IPR001844 (18%) IPR002423 (18%) IPR027409 (18%)" "Chaperonin Cpn60/GroEL (18%) Chaperonin Cpn60/GroEL/TCP-1 family (18%) GroEL-like apical domain superfamily (18%)" SYFSWLMGNKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "7.2.1.1 (94.7%) 1.6.5.- (5.3%)" "NADH:ubiquinone reductase (Na(+)-transporting) (94.7%) With a quinone or similar compound as acceptor (5.3%)" GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (25%) IPR022615 (25%) IPR056147 (25%)" "Na(+)-translocating NADH-quinone reductase subunit A (25%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (25%) NqrA, N-terminal barrel-sandwich hybrid domain (25%)" RLEELGIGRPSTYAPTIQTIQNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.6.2.1 (100%) DNA topoisomerase (100%) GO:0006265 (25.4%) "GO:0003677 (25.4%) GO:0003917 (25.4%) GO:0046872 (23.7%)" DNA topological change (25.4%) "DNA binding (25.4%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25.4%) metal ion binding (23.7%)" "IPR000380 (7.4%) IPR013497 (7.4%) IPR013824 (7.4%)" "DNA topoisomerase, type IA (7.4%) DNA topoisomerase, type IA, central (7.4%) DNA topoisomerase, type IA, central region, subdomain 1 (7.4%)" TTTTSLIYHIFK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.2.9 (100%) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase (100%) "GO:0008360 (14.4%) GO:0051301 (14.4%) GO:0009252 (14.4%)" GO:0005737 (14.4%) "GO:0005524 (14.4%) GO:0008764 (14.4%) GO:0016874 (0.1%)" "regulation of cell shape (14.4%) cell division (14.4%) peptidoglycan biosynthetic process (14.4%)" cytoplasm (14.4%) "ATP binding (14.4%) UDP-N-acetylmuramoylalanine-D-glutamate ligase activity (14.4%) ligase activity (0.1%)" "IPR005762 (20.1%) IPR013221 (20.1%) IPR036565 (20%)" "UDP-N-acetylmuramoylalanine-D-glutamate ligase MurD (20.1%) Mur ligase, central (20.1%) Mur-like, catalytic domain superfamily (20%)" GYVATVLVSSGTLR Rikenella microfusus Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Rikenellaceae Rikenella Rikenella microfusus GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (9.1%) IPR000795 (9.1%) IPR005225 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translational (tr)-type GTP-binding domain (9.1%) Small GTP-binding domain (9.1%)" GTKDWNFYR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" DTENEPLAIGGYLPLER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) "GO:0005975 (25%) GO:0030203 (25%)" GO:0016020 (25%) GO:0004563 (25%) "carbohydrate metabolic process (25%) glycosaminoglycan metabolic process (25%)" membrane (25%) beta-N-acetylhexosaminidase activity (25%) "IPR000421 (13.7%) IPR008979 (13.7%) IPR015882 (13.7%)" "Coagulation factor 5/8, C-terminal domain (13.7%) Galactose-binding-like domain superfamily (13.7%) Beta-hexosaminidase, bacterial type, N-terminal (13.7%)" MLAFENILQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.5.1.10 (100%) (2E,6E)-farnesyl diphosphate synthase (100%) GO:0008299 (50%) "GO:0004659 (36.4%) GO:0004337 (13.6%)" isoprenoid biosynthetic process (50%) "prenyltransferase activity (36.4%) (2E,6E)-farnesyl diphosphate synthase activity (13.6%)" "IPR000092 (33.3%) IPR008949 (33.3%) IPR033749 (33.3%)" "Polyprenyl synthetase-like (33.3%) Isoprenoid synthase domain superfamily (33.3%) Polyprenyl synthetase, conserved site (33.3%)" MKTFESLFAELSEK Actinomycetes Bacteria Bacillati Actinomycetota Actinomycetes 3.6.1.31 (100%) phosphoribosyl-ATP diphosphatase (100%) GO:0000105 (25%) GO:0005737 (25%) "GO:0004636 (25%) GO:0005524 (25%)" L-histidine biosynthetic process (25%) cytoplasm (25%) "phosphoribosyl-ATP diphosphatase activity (25%) ATP binding (25%)" "IPR008179 (50%) IPR021130 (50%)" "Phosphoribosyl-ATP pyrophosphohydrolase (50%) Phosphoribosyl-ATP pyrophosphohydrolase-like (50%)" LYLAEEAKDTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR024492 (100%) CT_309/TC_0583-like (100%) CSNGQTIIVTHDTNSPRPY Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.2.1.49 (75%) 3.2.1.- (25%)" "alpha-N-acetylgalactosaminidase (75%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (25%)" "GO:0000166 (50%) GO:0016798 (41.7%) GO:0008456 (8.3%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (41.7%) alpha-N-acetylgalactosaminidase activity (8.3%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" EQYRNEQISLLTLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.1.1.14 (100%) 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (100%) GO:0032259 (50%) GO:0003871 (50%) methylation (50%) 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity (50%) IPR038071 (100%) UROD/MetE-like superfamily (100%) VNELVEAMCVRR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006508 (5.3%) GO:0005737 (89.5%) GO:0008233 (5.3%) proteolysis (5.3%) cytoplasm (89.5%) peptidase activity (5.3%) "IPR002818 (25%) IPR006287 (25%) IPR029062 (25%)" "DJ-1/PfpI (25%) Protein/nucleic acid deglycase DJ-1 (25%) Class I glutamine amidotransferase-like (25%)" SSMKDKDKFIGIIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" YVILGHSERR root "5.3.1.1 (99.5%) 2.7.2.3 (0.4%) 1.2.1.12 (0%)" "triose-phosphate isomerase (99.5%) phosphoglycerate kinase (0.4%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (0%)" "GO:0006094 (16.5%) GO:0006096 (16.5%) GO:0019563 (16.4%)" "GO:0005829 (16.5%) GO:0016020 (0.5%) GO:0020015 (0%)" "GO:0004807 (16.5%) GO:0005524 (0.1%) GO:0004618 (0.1%)" "gluconeogenesis (16.5%) glycolytic process (16.5%) glycerol catabolic process (16.4%)" "cytosol (16.5%) membrane (0.5%) glycosome (0%)" "triose-phosphate isomerase activity (16.5%) ATP binding (0.1%) phosphoglycerate kinase activity (0.1%)" "IPR000652 (20.7%) IPR013785 (20.7%) IPR035990 (20.7%)" "Triosephosphate isomerase (20.7%) Aldolase-type TIM barrel (20.7%) Triosephosphate isomerase superfamily (20.7%)" FTGNKWNDKVYLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0006412 (20%) GO:0017148 (20%)" GO:0022625 (20%) "GO:0003729 (20%) GO:0003735 (20%)" "translation (20%) negative regulation of translation (20%)" cytosolic large ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%)" "IPR005822 (25%) IPR005823 (25%) IPR023563 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13, conserved site (25%)" EAEHVEGFAK root 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%) GO:0016020 (0.1%)" "GO:0004827 (20%) GO:0005524 (20%) GO:0016874 (0%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%) membrane (0.1%)" "proline-tRNA ligase activity (20%) ATP binding (20%) ligase activity (0%)" "IPR004499 (11.3%) IPR045864 (11.3%) IPR006195 (11.2%)" "Proline-tRNA ligase, class IIa, archaeal-type (11.3%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.3%) Aminoacyl-tRNA synthetase, class II (11.2%)" EGEATLAPSLDLVGKI root "1.11.1.26 (97.7%) 1.11.1.15 (1.3%) 1.11.1.24 (0.8%)" "NADH-dependent peroxiredoxin (97.7%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (1.3%) thioredoxin-dependent peroxiredoxin (0.8%)" "GO:0006979 (14.7%) GO:0042744 (14.7%) GO:0045454 (14.7%)" "GO:0005829 (14.7%) GO:0016020 (0%) GO:0005737 (0%)" "GO:0008379 (14.7%) GO:0102039 (11.5%) GO:0051920 (0.1%)" "response to oxidative stress (14.7%) hydrogen peroxide catabolic process (14.7%) cell redox homeostasis (14.7%)" "cytosol (14.7%) membrane (0%) cytoplasm (0%)" "thioredoxin peroxidase activity (14.7%) NADH-dependent peroxiredoxin activity (11.5%) peroxiredoxin activity (0.1%)" "IPR019479 (14.4%) IPR036249 (14.4%) IPR050217 (14.3%)" "Peroxiredoxin, C-terminal (14.4%) Thioredoxin-like superfamily (14.4%) Thiol-specific antioxidant peroxiredoxin (14.3%)" YGENPHQAAK Bacteria Bacteria "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" KWDLGDIIGAR root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.4%) GO:0006418 (0%) GO:0034605 (0%)" "GO:0005829 (14.4%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0004824 (14.4%) GO:0005524 (14.4%) GO:0000049 (14.3%)" "lysyl-tRNA aminoacylation (14.4%) tRNA aminoacylation for protein translation (0%) cellular response to heat (0%)" "cytosol (14.4%) cytoplasm (0.1%) membrane (0%)" "lysine-tRNA ligase activity (14.4%) ATP binding (14.4%) tRNA binding (14.3%)" "IPR012340 (11.3%) IPR044136 (11.3%) IPR004365 (11.2%)" "Nucleic acid-binding, OB-fold (11.3%) Lysine-tRNA ligase, class II, N-terminal (11.3%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.2%)" ELLAGVATNTAYLDGLMKPYLSR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006353 (24.3%) GO:0031564 (24.3%) GO:0006355 (0.9%)" "GO:0005829 (24.3%) GO:0008023 (0.3%)" GO:0003723 (25.2%) "DNA-templated transcription termination (24.3%) transcription antitermination (24.3%) regulation of DNA-templated transcription (0.9%)" "cytosol (24.3%) transcription elongation factor complex (0.3%)" RNA binding (25.2%) "IPR006027 (33.7%) IPR035926 (33.7%) IPR011605 (32.6%)" "NusB/RsmB/TIM44 (33.7%) NusB-like superfamily (33.7%) NusB antitermination factor (32.6%)" YIEYPEFQEYIAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (23.5%) GO:0046034 (1%)" "GO:0005524 (24.5%) GO:0046961 (24.5%) GO:0046933 (23.5%)" "proton motive force-driven plasma membrane ATP synthesis (23.5%) ATP metabolic process (1%)" "ATP binding (24.5%) proton-transporting ATPase activity, rotational mechanism (24.5%) proton-transporting ATP synthase activity, rotational mechanism (23.5%)" "IPR000194 (14.3%) IPR004100 (14.3%) IPR020003 (14.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (14.3%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (14.3%)" FGMNYSCLLNEYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006355 (0.5%) "GO:0003700 (49.8%) GO:0043565 (49.3%) GO:0000976 (0.5%)" regulation of DNA-templated transcription (0.5%) "DNA-binding transcription factor activity (49.8%) sequence-specific DNA binding (49.3%) transcription cis-regulatory region binding (0.5%)" "IPR018060 (50%) IPR009057 (49.5%) IPR020449 (0.5%)" "AraC-like, DNA binding HTH domain (50%) Homedomain-like superfamily (49.5%) Transcription regulator HTH, AraC- type, HTH domain (0.5%)" LASAVSNAGGLGLIGAGSMHPEVLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.13.12.16 (66.7%) 1.3.1.9 (33.3%)" "nitronate monooxygenase (66.7%) enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%)" "GO:0018580 (90.9%) GO:0051213 (9.1%)" "nitronate monooxygenase activity (90.9%) dioxygenase activity (9.1%)" "IPR004136 (50%) IPR013785 (50%)" "Nitronate monooxygenase (50%) Aldolase-type TIM barrel (50%)" AGFVHLNNNATGSVTFIGTVSPAGGNLKEPVTENTKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) GO:0042777 (24.2%) "GO:0005524 (24.2%) GO:0046933 (24.2%) GO:0046961 (24.2%)" proton motive force-driven plasma membrane ATP synthesis (24.2%) "ATP binding (24.2%) proton-transporting ATP synthase activity, rotational mechanism (24.2%) proton-transporting ATPase activity, rotational mechanism (24.2%)" "IPR000194 (14.3%) IPR004100 (14.3%) IPR020003 (14.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (14.3%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (14.3%)" TGDYLTQPITTAIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR000600 (20%) IPR036388 (20%) IPR036390 (20%)" "ROK family (20%) Winged helix-like DNA-binding domain superfamily (20%) Winged helix DNA-binding domain superfamily (20%)" VSATDMLGTVLKDVTFMEDGNIVATYK Phocaeicola vulgatus Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus IPR032573 (100%) Protein of unknown function DUF4925 (100%) YGIDQQETSLK root 1.-.-.- (100%) Oxidoreductases (100%) GO:0017000 (0.1%) GO:0005829 (0.1%) "GO:0016491 (50.1%) GO:0000166 (49.5%) GO:0004420 (0.2%)" antibiotic biosynthetic process (0.1%) cytosol (0.1%) "oxidoreductase activity (50.1%) nucleotide binding (49.5%) hydroxymethylglutaryl-CoA reductase (NADPH) activity (0.2%)" "IPR004104 (25.4%) IPR051317 (25.4%) IPR036291 (24.6%)" "Gfo/Idh/MocA-like oxidoreductase, C-terminal (25.4%) Gfo/Idh/MocA family oxidoreductases (25.4%) NAD(P)-binding domain superfamily (24.6%)" TTDVTGACK Bacteria Bacteria 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (23%) GO:0032045 (2.4%)" "GO:0003746 (23%) GO:0005525 (23%) GO:0003924 (14.3%)" "cytosol (23%) guanyl-nucleotide exchange factor complex (2.4%)" "translation elongation factor activity (23%) GTP binding (23%) GTPase activity (14.3%)" "IPR004160 (11.7%) IPR009001 (11.7%) IPR050055 (11.7%)" "Translation elongation factor EFTu/EF1A, C-terminal (11.7%) Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (11.7%) Elongation factor Tu GTPase (11.7%)" RTDINVYRVDAMDAATEMKNEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0016903 (71.4%) GO:0019164 (28.6%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (71.4%) pyruvate synthase activity (28.6%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" RVCSGESISSLYAI Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (19.7%) IPR000842 (19.7%) IPR005946 (19.7%)" "Phosphoribosyltransferase domain (19.7%) Phosphoribosyl pyrophosphate synthetase, conserved site (19.7%) Ribose-phosphate pyrophosphokinase (19.7%)" SILPVIDDMER Bacteria Bacteria GO:0006457 (17.1%) GO:0005737 (14.3%) "GO:0000774 (17.1%) GO:0042803 (17.1%) GO:0051082 (17.1%)" protein folding (17.1%) cytoplasm (14.3%) "adenyl-nucleotide exchange factor activity (17.1%) protein homodimerization activity (17.1%) unfolded protein binding (17.1%)" "IPR000740 (33.3%) IPR009012 (33.3%) IPR013805 (33.3%)" "GrpE nucleotide exchange factor (33.3%) GrpE nucleotide exchange factor, head (33.3%) GrpE nucleotide exchange factor, coiled-coil (33.3%)" NFGCDVAGMVAIFTYGFPVAEAAFKDAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25%) GO:0044205 (25%)" "GO:0000287 (25%) GO:0004588 (25%)" "pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" "magnesium ion binding (25%) orotate phosphoribosyltransferase activity (25%)" "IPR000836 (25%) IPR004467 (25%) IPR023031 (25%)" "Phosphoribosyltransferase domain (25%) Orotate phosphoribosyl transferase domain (25%) Orotate phosphoribosyltransferase (25%)" AAGAELVGMEDLADQIKK root "GO:0006417 (16.6%) GO:0006412 (16.5%) GO:0000027 (0%)" "GO:0022625 (16.7%) GO:0005840 (0.3%) GO:0005737 (0%)" "GO:0000049 (16.5%) GO:0003735 (16.5%) GO:0019843 (16.5%)" "regulation of translation (16.6%) translation (16.5%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (16.7%) ribosome (0.3%) cytoplasm (0%)" "tRNA binding (16.5%) structural constituent of ribosome (16.5%) rRNA binding (16.5%)" "IPR023674 (16.8%) IPR028364 (16.8%) IPR016095 (16.7%)" "Ribosomal protein uL1-like (16.8%) Ribosomal protein uL1/ribosomal biogenesis protein (16.8%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" GAYFANPCMVQIHPTCVPVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.3.5.1 (93.8%) 1.3.5.4 (6.3%)" "succinate dehydrogenase (93.8%) Transferred entry: 1.3.5.1 (6.3%)" GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (14.3%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (14.3%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" LATYKGQPVSTLLSEEKLNEVVASTMVGGATLTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (27%) GO:0006099 (23%)" "GO:0004459 (27%) GO:0030060 (22.1%) GO:0016491 (0.8%)" "lactate metabolic process (27%) tricarboxylic acid cycle (23%)" "L-lactate dehydrogenase (NAD+) activity (27%) L-malate dehydrogenase (NAD+) activity (22.1%) oxidoreductase activity (0.8%)" "IPR001236 (17.2%) IPR015955 (17.2%) IPR022383 (17.2%)" "Lactate/malate dehydrogenase, N-terminal (17.2%) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (17.2%) Lactate/malate dehydrogenase, C-terminal (17.2%)" HLGIVGECNIQYAFNSETCDYR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006541 (14.1%) GO:0006221 (13%) GO:0006526 (13%)" GO:0005737 (14.1%) "GO:0004088 (14.1%) GO:0005524 (14.1%) GO:0046872 (14.1%)" "glutamine metabolic process (14.1%) pyrimidine nucleotide biosynthetic process (13%) L-arginine biosynthetic process (13%)" cytoplasm (14.1%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14.1%) ATP binding (14.1%) metal ion binding (14.1%)" "IPR005479 (10.4%) IPR005483 (10.4%) IPR011761 (10.4%)" "Carbamoyl phosphate synthase, ATP-binding domain (10.4%) Carbamoyl phosphate synthase, CPSase domain (10.4%) ATP-grasp fold (10.4%)" HGASCPVGLGVSCSADRNIK Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20.7%) GO:0005829 (0.1%) "GO:0004333 (20.7%) GO:0046872 (20.7%) GO:0051539 (20.7%)" tricarboxylic acid cycle (20.7%) cytosol (0.1%) "fumarate hydratase activity (20.7%) metal ion binding (20.7%) 4 iron, 4 sulfur cluster binding (20.7%)" "IPR004646 (17.2%) IPR004647 (17.2%) IPR036660 (17.2%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (17.2%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (17.2%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (17.2%)" SLIHVPSPDTIDKIWIDSDRNIQTLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (48.6%) "GO:0004332 (48.6%) GO:0016829 (2.7%)" glycolytic process (48.6%) "fructose-bisphosphate aldolase activity (48.6%) lyase activity (2.7%)" "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" ILLCEDDENLGMLLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006355 (19.9%) GO:0000160 (0.2%)" "GO:0005829 (19.9%) GO:0032993 (19.9%)" "GO:0000156 (19.9%) GO:0000976 (19.9%) GO:0003677 (0.1%)" "regulation of DNA-templated transcription (19.9%) phosphorelay signal transduction system (0.2%)" "cytosol (19.9%) protein-DNA complex (19.9%)" "phosphorelay response regulator activity (19.9%) transcription cis-regulatory region binding (19.9%) DNA binding (0.1%)" "IPR001789 (17.6%) IPR001867 (17.5%) IPR011006 (17.5%)" "Signal transduction response regulator, receiver domain (17.6%) OmpR/PhoB-type DNA-binding domain (17.5%) CheY-like superfamily (17.5%)" ADFNVPLDGTTITDDGR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0043937 (0.1%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) regulation of sporulation (0.1%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (25%) IPR015824 (24.8%) IPR036043 (24.8%)" "Phosphoglycerate kinase (25%) Phosphoglycerate kinase, N-terminal (24.8%) Phosphoglycerate kinase superfamily (24.8%)" AILNPGTLVPFLVEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (19.9%) GO:0005829 (0.3%) "GO:0004333 (19.9%) GO:0042803 (19.9%) GO:0046872 (19.9%)" tricarboxylic acid cycle (19.9%) cytosol (0.3%) "fumarate hydratase activity (19.9%) protein homodimerization activity (19.9%) metal ion binding (19.9%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" ILSECYHFGENPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) "IPR008136 (50%) IPR036653 (50%)" "CinA, C-terminal (50%) CinA-like, C-terminal (50%)" YAINLNEAAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0034605 (19.7%) GO:0042026 (19%) GO:0006508 (1.1%)" GO:0005737 (19.7%) "GO:0005524 (19.7%) GO:0016887 (19.7%) GO:0008233 (1.1%)" "cellular response to heat (19.7%) protein refolding (19%) proteolysis (1.1%)" cytoplasm (19.7%) "ATP binding (19.7%) ATP hydrolysis activity (19.7%) peptidase activity (1.1%)" "IPR003593 (8.4%) IPR003959 (8.4%) IPR004176 (8.4%)" "AAA+ ATPase domain (8.4%) ATPase, AAA-type, core (8.4%) Clp, repeat (R) N-terminal domain (8.4%)" YTLAGTEVSALLGR root "7.1.2.2 (96.9%) 3.6.3.14 (3%) 2.6.1.16 (0%)" "H(+)-transporting two-sector ATPase (96.9%) Transferred entry: 7.1.2.2 (3%) glutamine--fructose-6-phosphate transaminase (isomerizing) (0%)" "GO:0000902 (0%) GO:0002098 (0%) GO:0006048 (0%)" "GO:0045259 (24.7%) GO:0005886 (20.6%) GO:0005739 (0%)" "GO:0005524 (24.7%) GO:0046933 (24.7%) GO:0016787 (4.2%)" "cell morphogenesis (0%) tRNA wobble uridine modification (0%) UDP-N-acetylglucosamine biosynthetic process (0%)" "proton-transporting ATP synthase complex (24.7%) plasma membrane (20.6%) mitochondrion (0%)" "ATP binding (24.7%) proton-transporting ATP synthase activity, rotational mechanism (24.7%) hydrolase activity (4.2%)" "IPR000194 (11.6%) IPR050053 (11.6%) IPR027417 (11.6%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11.6%) ATPase alpha/beta chains (11.6%) P-loop containing nucleoside triphosphate hydrolase (11.6%)" YLPQQMSAEELEKELK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0016884 (88.9%) GO:0016740 (11.1%)" "carbon-nitrogen ligase activity, with glutamine as amido-N-donor (88.9%) transferase activity (11.1%)" "IPR003789 (25%) IPR019004 (25%) IPR023168 (25%)" "Aspartyl/glutamyl-tRNA amidotransferase subunit B-like (25%) Uncharacterised protein YqeY/Aim41 (25%) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 (25%)" GILQAEGAEIINEENWGLKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" GILQSTIPANTTKPICLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.3.1.245 (75%) 4.1.2.- (25%)" "3-hydroxy-5-phosphooxypentane-2,4-dione thiolase (75%) Aldehyde-lyases (25%)" "GO:0004332 (66.7%) GO:0016746 (33.3%)" "fructose-bisphosphate aldolase activity (66.7%) acyltransferase activity (33.3%)" "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" GVMLTGNNLAGNVTYAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.2.1.3 (100%) long-chain-fatty-acid--CoA ligase (100%) GO:0016020 (8.3%) "GO:0016405 (66.7%) GO:0004467 (25%)" membrane (8.3%) "CoA-ligase activity (66.7%) long-chain fatty acid-CoA ligase activity (25%)" "IPR000873 (33.3%) IPR020845 (33.3%) IPR042099 (33.3%)" "AMP-dependent synthetase/ligase domain (33.3%) AMP-binding, conserved site (33.3%) ANL, N-terminal domain (33.3%)" VQTNEETGQTVISGMGELHLDIIIDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" HTVEVMIPEAEIK root 2.4.2.8 (100%) hypoxanthine phosphoribosyltransferase (100%) "GO:0006178 (10%) GO:0032263 (10%) GO:0032264 (10%)" "GO:0005829 (10%) GO:0032991 (0%)" "GO:0000287 (10%) GO:0004422 (10%) GO:0052657 (10%)" "guanine salvage (10%) GMP salvage (10%) IMP salvage (10%)" "cytosol (10%) protein-containing complex (0%)" "magnesium ion binding (10%) hypoxanthine phosphoribosyltransferase activity (10%) guanine phosphoribosyltransferase activity (10%)" "IPR029057 (25.2%) IPR000836 (25.1%) IPR050408 (25.1%)" "Phosphoribosyltransferase-like (25.2%) Phosphoribosyltransferase domain (25.1%) Hypoxanthine-guanine phosphoribosyltransferase (25.1%)" SGVTHFTAETGEEGLAIIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.-.-.- (100%) Ligases (100%) GO:0015977 (20.6%) GO:0009317 (20.6%) "GO:0004658 (22.2%) GO:0003989 (20.6%) GO:0016740 (12.7%)" carbon fixation (20.6%) acetyl-CoA carboxylase complex (20.6%) "propionyl-CoA carboxylase activity (22.2%) acetyl-CoA carboxylase activity (20.6%) transferase activity (12.7%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" MKEFPDTQYTVYGYADSATGTPAFNKELSQKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (25%) IPR006665 (25%) IPR036737 (25%)" "Outer membrane protein, bacterial (25%) OmpA-like domain (25%) OmpA-like domain superfamily (25%)" TVAISGFGNVAWGAATK root "1.4.1.4 (82.6%) 1.4.1.2 (17.4%)" "glutamate dehydrogenase (NADP(+)) (82.6%) glutamate dehydrogenase (17.4%)" GO:0006537 (25.5%) GO:0005829 (25.3%) "GO:0004354 (25.5%) GO:0000166 (23%) GO:0004352 (0.5%)" glutamate biosynthetic process (25.5%) cytosol (25.3%) "glutamate dehydrogenase (NADP+) activity (25.5%) nucleotide binding (23%) glutamate dehydrogenase (NAD+) activity (0.5%)" "IPR006095 (11.4%) IPR006096 (11.4%) IPR036291 (11.4%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.4%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.4%) NAD(P)-binding domain superfamily (11.4%)" YIKPNLNWEEFSVAMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0019698 (36.7%) GO:0042840 (36.7%)" GO:0016746 (26.7%) "D-galacturonate catabolic process (36.7%) D-glucuronate catabolic process (36.7%)" acyltransferase activity (26.7%) HRGPDWSGIYASDNAILAHER root 6.3.5.4 (100%) asparagine synthase (glutamine-hydrolyzing) (100%) "GO:0006529 (24.7%) GO:0070981 (0.3%) GO:0006541 (0.1%)" "GO:0005829 (24.9%) GO:0005737 (0.1%)" "GO:0004066 (25%) GO:0005524 (22.9%) GO:0016874 (1%)" "obsolete asparagine biosynthetic process (24.7%) L-asparagine biosynthetic process (0.3%) glutamine metabolic process (0.1%)" "cytosol (24.9%) cytoplasm (0.1%)" "asparagine synthase (glutamine-hydrolyzing) activity (25%) ATP binding (22.9%) ligase activity (1%)" "IPR017932 (15%) IPR029055 (15%) IPR050795 (14.8%)" "Glutamine amidotransferase type 2 domain (15%) Nucleophile aminohydrolases, N-terminal (15%) Asparagine Synthetase (14.8%)" AKDFEDAVEKAEK root "1.1.1.1 (63.6%) 1.2.1.10 (36.4%)" "alcohol dehydrogenase (63.6%) acetaldehyde dehydrogenase (acetylating) (36.4%)" "GO:0015976 (18.1%) GO:0006066 (18%) GO:0006115 (0.1%)" "GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0046872 (20%) GO:0008774 (18.9%) GO:0004022 (17%)" "carbon utilization (18.1%) alcohol metabolic process (18%) ethanol biosynthetic process (0.1%)" "cytosol (0.1%) membrane (0.1%)" "metal ion binding (20%) acetaldehyde dehydrogenase (acetylating) activity (18.9%) alcohol dehydrogenase (NAD+) activity (17%)" "IPR016161 (10.4%) IPR016163 (10.4%) IPR001670 (10.2%)" "Aldehyde/histidinol dehydrogenase (10.4%) Aldehyde dehydrogenase, C-terminal (10.4%) Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (10.2%)" VEKKEDHTVISYR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.1.1.1 (100%) alanine racemase (100%) GO:0030632 (20%) "GO:0005524 (20%) GO:0008784 (20%) GO:0016881 (20%)" D-alanine biosynthetic process (20%) "ATP binding (20%) alanine racemase activity (20%) acid-amino acid ligase activity (20%)" "IPR000821 (10%) IPR001608 (10%) IPR009006 (10%)" "Alanine racemase (10%) Alanine racemase, N-terminal (10%) Alanine racemase/group IV decarboxylase, C-terminal (10%)" MNLYISNLSYNISDEDLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003723 (100%) RNA binding (100%) "IPR000504 (20%) IPR012677 (20%) IPR035979 (20%)" "RNA recognition motif domain (20%) Nucleotide-binding alpha-beta plait domain superfamily (20%) RNA-binding domain superfamily (20%)" AGDAGIFFIDSQLGQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.16.3.2 (94.7%) 1.16.3.1 (5.3%)" "bacterial non-heme ferritin (94.7%) ferroxidase (5.3%)" "GO:0006826 (14.5%) GO:0006879 (14.5%)" GO:0005829 (14.5%) "GO:0004322 (14.5%) GO:0008198 (14.5%) GO:0008199 (14.5%)" "iron ion transport (14.5%) intracellular iron ion homeostasis (14.5%)" cytosol (14.5%) "ferroxidase activity (14.5%) ferrous iron binding (14.5%) ferric iron binding (14.5%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" ANAYDMVINGVEVGGGSIR root 6.1.1.12 (100%) aspartate--tRNA ligase (100%) GO:0006422 (20.1%) "GO:0005737 (19.9%) GO:0016020 (0.1%)" "GO:0004815 (20.1%) GO:0005524 (20.1%) GO:0003676 (19.5%)" aspartyl-tRNA aminoacylation (20.1%) "cytoplasm (19.9%) membrane (0.1%)" "aspartate-tRNA ligase activity (20.1%) ATP binding (20.1%) nucleic acid binding (19.5%)" "IPR002312 (9.2%) IPR004364 (9.2%) IPR045864 (9.2%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.2%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.2%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (9.2%)" LRAEALDHVLLHGPPGLGK Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.6.4.- (87.7%) 3.6.4.12 (12.3%)" "Acting on ATP; involved in cellular and subcellular movement (87.7%) DNA helicase (12.3%)" "GO:0006281 (12.8%) GO:0006310 (12.8%)" "GO:0005737 (12.1%) GO:0048476 (11.8%)" "GO:0005524 (12.8%) GO:0009378 (12.8%) GO:0000400 (11.8%)" "DNA repair (12.8%) DNA recombination (12.8%)" "cytoplasm (12.1%) Holliday junction resolvase complex (11.8%)" "ATP binding (12.8%) four-way junction helicase activity (12.8%) four-way junction DNA binding (11.8%)" "IPR004605 (12.9%) IPR008824 (12.9%) IPR027417 (12.9%)" "Holliday junction branch migration complex subunit RuvB (12.9%) RuvB-like, AAA+ ATPase domain (12.9%) P-loop containing nucleoside triphosphate hydrolase (12.9%)" FCDAFNIPLVSLVDVPGFLPGTGQEYNGVILHGAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.-.-.- (100%) Ligases (100%) GO:0015977 (22.4%) GO:0009317 (22.4%) "GO:0004658 (23.5%) GO:0003989 (22.4%) GO:0016740 (8.8%)" carbon fixation (22.4%) acetyl-CoA carboxylase complex (22.4%) "propionyl-CoA carboxylase activity (23.5%) acetyl-CoA carboxylase activity (22.4%) transferase activity (8.8%)" "IPR011763 (20%) IPR029045 (20%) IPR034733 (20%)" "Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20%)" ASQTLNGVANPDAVTSYLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" QKSGSIINMASVVGVHGNAGQCNYSASK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) GO:0006633 (33.3%) "GO:0004316 (33.3%) GO:0051287 (33.3%)" fatty acid biosynthetic process (33.3%) "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33.3%) NAD binding (33.3%)" "IPR002347 (16.7%) IPR011284 (16.7%) IPR020904 (16.7%)" "Short-chain dehydrogenase/reductase SDR (16.7%) 3-oxoacyl-(acyl-carrier-protein) reductase (16.7%) Short-chain dehydrogenase/reductase, conserved site (16.7%)" MVGGVTPGKGGTTHLGLPVFNTVR Bacteria Bacteria 6.2.1.5 (100%) succinate--CoA ligase (ADP-forming) (100%) "GO:0006099 (19.9%) GO:0006104 (0%)" "GO:0009361 (19.9%) GO:0005829 (0.1%) GO:0005737 (0%)" "GO:0004775 (19.9%) GO:0004776 (19.9%) GO:0000166 (19.7%)" "tricarboxylic acid cycle (19.9%) succinyl-CoA metabolic process (0%)" "succinate-CoA ligase complex (ADP-forming) (19.9%) cytosol (0.1%) cytoplasm (0%)" "succinate-CoA ligase (ADP-forming) activity (19.9%) succinate-CoA ligase (GDP-forming) activity (19.9%) nucleotide binding (19.7%)" "IPR003781 (14.6%) IPR036291 (14.6%) IPR016102 (14.3%)" "CoA-binding (14.6%) NAD(P)-binding domain superfamily (14.6%) Succinyl-CoA synthetase-like (14.3%)" ALDDVLPQAFAIVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.2%) GO:0017038 (11.2%) GO:0043952 (11.2%)" "GO:0005829 (11.2%) GO:0005886 (11.2%) GO:0031522 (11.2%)" "GO:0005524 (11.2%) GO:0046872 (9.7%) GO:0008564 (0.5%)" "protein targeting (11.2%) protein import (11.2%) protein transport by the Sec complex (11.2%)" "cytosol (11.2%) plasma membrane (11.2%) cell envelope Sec protein transport complex (11.2%)" "ATP binding (11.2%) metal ion binding (9.7%) protein-exporting ATPase activity (0.5%)" "IPR000185 (8.2%) IPR011115 (8.2%) IPR014018 (8.2%)" "Protein translocase subunit SecA (8.2%) SecA DEAD-like, N-terminal (8.2%) SecA motor DEAD (8.2%)" DNMEKLYK root "4.1.2.13 (98.2%) 4.1.2.- (1.8%)" "fructose-bisphosphate aldolase (98.2%) Aldehyde-lyases (1.8%)" "GO:0006096 (24.4%) GO:0030388 (24.4%) GO:0005975 (0.4%)" "GO:0016020 (0.4%) GO:0005739 (0.2%)" "GO:0008270 (24.8%) GO:0004332 (24.4%) GO:0016832 (0.4%)" "glycolytic process (24.4%) fructose 1,6-bisphosphate metabolic process (24.4%) carbohydrate metabolic process (0.4%)" "membrane (0.4%) mitochondrion (0.2%)" "zinc ion binding (24.8%) fructose-bisphosphate aldolase activity (24.4%) aldehyde-lyase activity (0.4%)" "IPR000771 (24.5%) IPR013785 (24.5%) IPR050246 (24.5%)" "Fructose-bisphosphate aldolase, class-II (24.5%) Aldolase-type TIM barrel (24.5%) Class II Fructose-bisphosphate Aldolase (24.5%)" SGTLGIGFLGGHNAMVALYGEGHGHSQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.17.4.2 (100%) ribonucleoside-triphosphate reductase (thioredoxin) (100%) "GO:0006260 (16.5%) GO:0009265 (16.5%)" GO:0031250 (16.5%) "GO:0005524 (16.5%) GO:0008998 (16.5%) GO:0004748 (16%)" "DNA replication (16.5%) 2'-deoxyribonucleotide biosynthetic process (16.5%)" anaerobic ribonucleoside-triphosphate reductase complex (16.5%) "ATP binding (16.5%) ribonucleoside-triphosphate reductase (thioredoxin) activity (16.5%) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16%)" "IPR005144 (50%) IPR012833 (50%)" "ATP-cone domain (50%) Ribonucleoside-triphosphate reductase, anaerobic (50%)" KMLANPDKTDLIEAFYKDLEFGTGGLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.- (50%) 5.4.2.2 (50%)" "Phosphotransferases (phosphomutases) (50%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (50%)" "GO:0005975 (23.9%) GO:0006166 (23.9%)" "GO:0000287 (23.9%) GO:0008973 (23.9%) GO:0004614 (4.2%)" "carbohydrate metabolic process (23.9%) purine ribonucleoside salvage (23.9%)" "magnesium ion binding (23.9%) phosphopentomutase activity (23.9%) phosphoglucomutase activity (4.2%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" ITSVTGPNTLHGTAVIYK root "GO:0006950 (20%) GO:0043707 (10%) GO:0043709 (10%)" "GO:0009279 (30%) GO:0016020 (10%)" "response to stress (20%) cell adhesion involved in single-species biofilm formation in or on host organism (10%) cell adhesion involved in single-species biofilm formation (10%)" "cell outer membrane (30%) membrane (10%)" "IPR010854 (25.1%) IPR025543 (25.1%) IPR036275 (25.1%)" "YdgH/BhsA/McbA-like domain (25.1%) Dodecin-like (25.1%) YdgH-like superfamily (25.1%)" GNLVAIVGRPNVGK root 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) GO:0042254 (31.2%) "GO:0005525 (31.7%) GO:0043022 (31.6%) GO:0016787 (5.6%)" ribosome biogenesis (31.2%) "GTP binding (31.7%) ribosome binding (31.6%) hydrolase activity (5.6%)" "IPR006073 (14.4%) IPR027417 (14.4%) IPR005225 (14.3%)" "GTP binding domain (14.4%) P-loop containing nucleoside triphosphate hydrolase (14.4%) Small GTP-binding domain (14.3%)" FVMAGSGDMMDQMIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.4.1.250 (41.7%) 2.4.-.- (33.3%) 2.4.1.11 (25%)" "D-inositol-3-phosphate glycosyltransferase (41.7%) Glycosyltransferases (33.3%) glycogen(starch) synthase (25%)" GO:0009103 (21.8%) "GO:0016757 (63.6%) GO:0102710 (9.1%) GO:0004373 (5.5%)" lipopolysaccharide biosynthetic process (21.8%) "glycosyltransferase activity (63.6%) D-inositol-3-phosphate glycosyltransferase activity (9.1%) alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (5.5%)" "IPR001296 (36.8%) IPR028098 (36.8%) IPR050194 (26.5%)" "Glycosyl transferase, family 1 (36.8%) Glycosyltransferase subfamily 4-like, N-terminal domain (36.8%) Glycosyltransferase group 1 (26.5%)" YRADVLIEDQIAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.7%) GO:0015966 (12.2%) GO:0044281 (0.3%)" "GO:0005737 (12.7%) GO:0070062 (12.2%) GO:1990742 (12.2%)" "GO:0004820 (12.7%) GO:0005524 (12.6%) GO:0004081 (12.2%)" "glycyl-tRNA aminoacylation (12.7%) diadenosine tetraphosphate biosynthetic process (12.2%) small molecule metabolic process (0.3%)" "cytoplasm (12.7%) extracellular exosome (12.2%) microvesicle (12.2%)" "glycine-tRNA ligase activity (12.7%) ATP binding (12.6%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.2%)" "IPR027031 (11.3%) IPR045864 (11.3%) IPR002314 (11.1%)" "Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 (11.3%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.3%) Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%)" FVIGGPMGDCGLTGR root 2.5.1.6 (100%) methionine adenosyltransferase (100%) "GO:0006556 (16.7%) GO:0006730 (16.7%) GO:0016539 (0%)" "GO:0005737 (16.2%) GO:0005829 (0.1%)" "GO:0004478 (16.7%) GO:0005524 (16.7%) GO:0000287 (16.2%)" "S-adenosylmethionine biosynthetic process (16.7%) one-carbon metabolic process (16.7%) intein-mediated protein splicing (0%)" "cytoplasm (16.2%) cytosol (0.1%)" "methionine adenosyltransferase activity (16.7%) ATP binding (16.7%) magnesium ion binding (16.2%)" "IPR002133 (16.7%) IPR022630 (16.7%) IPR022631 (16.7%)" "S-adenosylmethionine synthetase (16.7%) S-adenosylmethionine synthetase, C-terminal (16.7%) S-adenosylmethionine synthetase, conserved site (16.7%)" EGIIQEALVETIGCSGMTHSAAMASEILPGK Bacteria Bacteria AVPHATLSIEAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) "GO:0006334 (0.6%) GO:0006355 (0.2%)" GO:0000786 (0.6%) "GO:0008270 (97.3%) GO:0003677 (0.6%) GO:0030527 (0.6%)" "nucleosome assembly (0.6%) regulation of DNA-templated transcription (0.2%)" nucleosome (0.6%) "zinc ion binding (97.3%) DNA binding (0.6%) structural constituent of chromatin (0.6%)" "IPR000962 (66.2%) IPR037187 (33.3%) IPR005819 (0.4%)" "Zinc finger, DksA/TraR C4-type (66.2%) DksA, N-terminal domain superfamily (33.3%) Linker histone H1/H5 (0.4%)" TIEREELHKLDECEATK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.4.1.13 (100%) glutamate synthase (NADPH) (100%) "GO:0051536 (48.6%) GO:0016491 (27%) GO:0004355 (21.6%)" "iron-sulfur cluster binding (48.6%) oxidoreductase activity (27%) glutamate synthase (NADPH) activity (21.6%)" "IPR001433 (10%) IPR006004 (10%) IPR009051 (10%)" "Oxidoreductase FAD/NAD(P)-binding (10%) Sulfide dehydrogenase subunit alpha-like (10%) Alpha-helical ferredoxin (10%)" VELEPTVEPIVEPEPIKEKPKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0043093 (33.3%) "GO:0009898 (33.3%) GO:0032153 (33.3%)" FtsZ-dependent cytokinesis (33.3%) "cytoplasmic side of plasma membrane (33.3%) cell division site (33.3%)" "IPR003494 (25%) IPR020823 (25%) IPR043129 (25%)" "SHS2 domain inserted in FtsA (25%) Cell division protein FtsA (25%) ATPase, nucleotide binding domain (25%)" SGVAGLSGISSDMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" AEEAEANALFEQAVQALK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR025347 (100%) Protein of unknown function DUF4251 (100%) KGAFDEAAAEEKFQAWLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" NAGDAIMQVYDGTKPMDVVSK root "3.1.3.7 (98.9%) 3.1.3.57 (1.1%)" "3'(2'),5'-bisphosphate nucleotidase (98.9%) inositol-1,4-bisphosphate 1-phosphatase (1.1%)" "GO:0000103 (16.9%) GO:0050427 (16.9%) GO:0046854 (15.1%)" GO:0005886 (16.9%) "GO:0008441 (16.9%) GO:0000287 (16%) GO:0046872 (1.1%)" "sulfate assimilation (16.9%) 3'-phosphoadenosine 5'-phosphosulfate metabolic process (16.9%) phosphatidylinositol phosphate biosynthetic process (15.1%)" plasma membrane (16.9%) "3'(2'),5'-bisphosphate nucleotidase activity (16.9%) magnesium ion binding (16%) metal ion binding (1.1%)" "IPR000760 (20.8%) IPR020583 (20.6%) IPR050725 (20.6%)" "Inositol monophosphatase-like (20.8%) Inositol monophosphatase, metal-binding site (20.6%) CysQ/Inositol Monophosphatase (20.6%)" SICEDDKLDLALDLIKK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (32.7%) IPR015824 (32.7%) IPR036043 (32.7%)" "Phosphoglycerate kinase (32.7%) Phosphoglycerate kinase, N-terminal (32.7%) Phosphoglycerate kinase superfamily (32.7%)" FIGGGLKYPYVEGLR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "1.8.5.- (97.5%) 1.8.-.- (2.5%)" "With a quinone or similar compound as acceptor (97.5%) Acting on a sulfur group of donors (2.5%)" "GO:0030091 (20.4%) GO:1901530 (0%)" "GO:0042597 (17.6%) GO:0030288 (0%)" "GO:0043546 (20.4%) GO:0046872 (20.4%) GO:0016672 (20.4%)" "protein repair (20.4%) response to hypochlorite (0%)" "periplasmic space (17.6%) outer membrane-bounded periplasmic space (0%)" "molybdopterin cofactor binding (20.4%) metal ion binding (20.4%) oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor (20.4%)" "IPR000572 (25.7%) IPR036374 (25.7%) IPR022867 (24.7%)" "Oxidoreductase, molybdopterin-binding domain (25.7%) Oxidoreductase, molybdopterin-binding domain superfamily (25.7%) Protein-methionine-sulfoxide reductase subunit MsrP (24.7%)" AVKEACGLGLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0022625 (25%) GO:0005840 (0.1%)" "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) "cytosolic large ribosomal subunit (25%) ribosome (0.1%)" "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20.1%) IPR013823 (20.1%) IPR014719 (20.1%)" "Large ribosomal subunit protein bL12 (20.1%) Large ribosomal subunit protein bL12, C-terminal (20.1%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20.1%)" LHYVSEWWK Bacteria Bacteria 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" "GO:0005829 (14.3%) GO:0016020 (0.1%)" "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.2%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" "cytosol (14.3%) membrane (0.1%)" "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.2%)" "IPR001672 (19.9%) IPR018189 (19.9%) IPR046348 (19.9%)" "Phosphoglucose isomerase (PGI) (19.9%) Phosphoglucose isomerase, conserved site (19.9%) SIS domain superfamily (19.9%)" EGINCNLTLLFSFAQAR root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (24.7%) GO:0009052 (0.1%)" "GO:0005829 (25%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0004801 (25%) GO:0016740 (0.2%) GO:0016744 (0%)" "carbohydrate metabolic process (25%) pentose-phosphate shunt (24.7%) pentose-phosphate shunt, non-oxidative branch (0.1%)" "cytosol (25%) cytoplasm (0%) membrane (0%)" "transaldolase activity (25%) transferase activity (0.2%) transketolase or transaldolase activity (0%)" "IPR001585 (25.1%) IPR013785 (25.1%) IPR018225 (25%)" "Transaldolase/Fructose-6-phosphate aldolase (25.1%) Aldolase-type TIM barrel (25.1%) Transaldolase, active site (25%)" RKGEMTMMESK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0009409 (10%) GO:0010467 (10%) GO:0000027 (9.6%)" "GO:0005829 (10.3%) GO:1990904 (10.3%)" "GO:0003924 (10.3%) GO:0005525 (10.3%) GO:0000049 (9.6%)" "response to cold (10%) gene expression (10%) ribosomal large subunit assembly (9.6%)" "cytosol (10.3%) ribonucleoprotein complex (10.3%)" "GTPase activity (10.3%) GTP binding (10.3%) tRNA binding (9.6%)" "IPR000640 (6.9%) IPR004161 (6.9%) IPR009000 (6.9%)" "Elongation factor EFG, domain V-like (6.9%) Translation elongation factor EFTu-like, domain 2 (6.9%) Translation protein, beta-barrel domain superfamily (6.9%)" MHYIHQEGR Pseudomonadati Bacteria Pseudomonadati 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) "GO:0006633 (20.2%) GO:0044550 (20.2%)" GO:0005737 (19.9%) "GO:0004315 (20.2%) GO:0033818 (19.6%)" "fatty acid biosynthetic process (20.2%) secondary metabolite biosynthetic process (20.2%)" cytoplasm (19.9%) "3-oxoacyl-[acyl-carrier-protein] synthase activity (20.2%) beta-ketoacyl-acyl-carrier-protein synthase III activity (19.6%)" "IPR013747 (25.1%) IPR013751 (25.1%) IPR016039 (25.1%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (25.1%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (25.1%) Thiolase-like (25.1%)" VASPAIVEAKPVK root "GO:0006355 (24.3%) GO:0032297 (23.3%) GO:0005975 (0.3%)" "GO:0005737 (23.3%) GO:0005829 (0.7%) GO:0032991 (0.3%)" "GO:0043565 (23.7%) GO:0000287 (0.3%) GO:0003677 (0.3%)" "regulation of DNA-templated transcription (24.3%) negative regulation of DNA-templated DNA replication initiation (23.3%) carbohydrate metabolic process (0.3%)" "cytoplasm (23.3%) cytosol (0.7%) protein-containing complex (0.3%)" "sequence-specific DNA binding (23.7%) magnesium ion binding (0.3%) DNA binding (0.3%)" "IPR010985 (16.5%) IPR013321 (16.5%) IPR033761 (16.5%)" "Ribbon-helix-helix (16.5%) Arc-type ribbon-helix-helix (16.5%) Negative modulator of initiation of replication SeqA, N-terminal (16.5%)" HYGALQGLNKAETAEKYGDEQVK root "5.4.2.11 (99.5%) 5.4.2.- (0.3%) 5.4.2.1 (0.1%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (99.5%) Phosphotransferases (phosphomutases) (0.3%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.1%)" "GO:0006096 (33.1%) GO:0006094 (33%) GO:0061621 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004619 (32.9%) GO:0016853 (0.3%) GO:0016868 (0.3%)" "glycolytic process (33.1%) gluconeogenesis (33%) canonical glycolysis (0%)" "cytoplasm (0%) cytosol (0%)" "phosphoglycerate mutase activity (32.9%) isomerase activity (0.3%) intramolecular phosphotransferase activity (0.3%)" "IPR005952 (25.1%) IPR013078 (25.1%) IPR029033 (25.1%)" "Phosphoglycerate mutase 1 (25.1%) Histidine phosphatase superfamily, clade-1 (25.1%) Histidine phosphatase superfamily (25.1%)" NAMGVGIPGTGMIGLPIAVALGALIGK Pseudomonadati Bacteria Pseudomonadati 4.3.1.17 (100%) L-serine ammonia-lyase (100%) GO:0019450 (48.8%) GO:0016020 (2.3%) GO:0080146 (48.8%) L-cysteine catabolic process to pyruvate (48.8%) membrane (2.3%) L-cysteine desulfhydrase activity (48.8%) "IPR021144 (51.6%) IPR005130 (48.4%)" "Uncharacterised protein family UPF0597 (51.6%) Serine dehydratase-like, alpha subunit (48.4%)" GAGEGDVVKIDLNQPMADILK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" LVGDNIETGVYPIAQALK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (20%) "GO:0005829 (20%) GO:0016020 (20%)" "GO:0003743 (20%) GO:0043022 (20%)" ribosome disassembly (20%) "cytosol (20%) membrane (20%)" "translation initiation factor activity (20%) ribosome binding (20%)" "IPR001288 (20%) IPR019814 (20%) IPR019815 (20%)" "Translation initiation factor 3 (20%) Translation initiation factor 3, N-terminal (20%) Translation initiation factor 3, C-terminal (20%)" IIVGSKEEYDR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) GO:0000428 (17%) "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0000287 (16%)" DNA-templated transcription (16.8%) DNA-directed RNA polymerase complex (17%) "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) magnesium ion binding (16%)" "IPR007081 (9.3%) IPR045867 (9.2%) IPR007083 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.3%) DNA-directed RNA polymerase, subunit beta-prime (9.2%) RNA polymerase Rpb1, domain 4 (9.1%)" FFLDPGHMSPMLYSVLAFTGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.2.1.1 (95.7%) 2.2.1.- (4.3%)" "transketolase (95.7%) Transketolases and transaldolases (4.3%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" ISFYAVDEAHCISEWGHDFRPEYR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "5.6.2.4 (90.7%) 3.6.4.12 (8.6%) 3.6.1.- (0.7%)" "DNA 3'-5' helicase (90.7%) DNA helicase (8.6%) In phosphorus-containing anhydrides (0.7%)" "GO:0006281 (8.4%) GO:0006310 (8.4%) GO:0006260 (8.2%)" "GO:0005737 (8.4%) GO:0030894 (8.4%) GO:0043590 (8.4%)" "GO:0009378 (8.4%) GO:0016787 (8.4%) GO:0043138 (8.4%)" "DNA repair (8.4%) DNA recombination (8.4%) DNA replication (8.2%)" "cytoplasm (8.4%) replisome (8.4%) bacterial nucleoid (8.4%)" "four-way junction helicase activity (8.4%) hydrolase activity (8.4%) 3'-5' DNA helicase activity (8.4%)" "IPR014001 (7.3%) IPR027417 (7.3%) IPR004589 (7.2%)" "Helicase superfamily 1/2, ATP-binding domain (7.3%) P-loop containing nucleoside triphosphate hydrolase (7.3%) DNA helicase, ATP-dependent, RecQ type (7.2%)" VMYLPEGIAGIPQKDGIAAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "4.1.1.12 (94.1%) 2.6.1.1 (5.9%)" "aspartate 4-decarboxylase (94.1%) aspartate transaminase (5.9%)" GO:0006520 (27.3%) "GO:0030170 (27.3%) GO:0008483 (24.7%) GO:0047688 (10.4%)" amino acid metabolic process (27.3%) "pyridoxal phosphate binding (27.3%) transaminase activity (24.7%) aspartate 4-decarboxylase activity (10.4%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" SFLESLGSDQAK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006457 (0.1%) GO:0006974 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (19.5%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0005524 (19.8%) GO:0016887 (19.8%) GO:0051082 (19.8%)" "protein folding (0.1%) DNA damage response (0.1%) response to heat (0.1%)" "cytoplasm (19.5%) cytosol (0.1%) plasma membrane (0.1%)" "ATP binding (19.8%) ATP hydrolysis activity (19.8%) unfolded protein binding (19.8%)" "IPR001404 (14.8%) IPR020575 (14.8%) IPR036890 (14.8%)" "Heat shock protein Hsp90 family (14.8%) Heat shock protein Hsp90, N-terminal (14.8%) Histidine kinase/HSP90-like ATPase superfamily (14.8%)" MNEVQAPVYDPNREPVMDINR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.5.1.108 (50%) 4.2.1.59 (50%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase (50%) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (50%)" "GO:0006633 (14.3%) GO:0009245 (14.3%)" "GO:0005737 (14.3%) GO:0016020 (14.3%)" "GO:0046872 (14.3%) GO:0103117 (14.3%) GO:0019171 (10.2%)" "fatty acid biosynthetic process (14.3%) lipid A biosynthetic process (14.3%)" "cytoplasm (14.3%) membrane (14.3%)" "metal ion binding (14.3%) UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.3%) (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (10.2%)" "IPR004463 (14.3%) IPR010084 (14.3%) IPR011334 (14.3%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.3%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (14.3%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.3%)" NTTSDYDKEKLQER root 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.5%) GO:0005737 (15.6%) "GO:0005524 (17.5%) GO:0140662 (17.5%) GO:0016853 (16.5%)" protein refolding (17.5%) cytoplasm (15.6%) "ATP binding (17.5%) ATP-dependent protein folding chaperone (17.5%) isomerase activity (16.5%)" "IPR001844 (17.1%) IPR002423 (17.1%) IPR027409 (16.8%)" "Chaperonin Cpn60/GroEL (17.1%) Chaperonin Cpn60/GroEL/TCP-1 family (17.1%) GroEL-like apical domain superfamily (16.8%)" INPNALLIGFAR Bacteria Bacteria 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0030170 (33.3%) GO:0008184 (32.8%) GO:0004645 (0.5%)" carbohydrate metabolic process (33.3%) "pyridoxal phosphate binding (33.3%) glycogen phosphorylase activity (32.8%) 1,4-alpha-oligoglucan phosphorylase activity (0.5%)" "IPR011834 (25.2%) IPR052182 (25.2%) IPR000811 (24.8%)" "Alpha-glucan phosphorylase (25.2%) Glycogen_Maltodextrin_Phosphorylase (25.2%) Glycosyl transferase, family 35 (24.8%)" EFKVECNQGKPQVNYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.3%) GO:0005737 (19.3%) "GO:0003746 (20.4%) GO:0005525 (20.3%) GO:0003924 (19.7%)" ribosome disassembly (20.3%) cytoplasm (19.3%) "translation elongation factor activity (20.4%) GTP binding (20.3%) GTPase activity (19.7%)" "IPR000640 (6.3%) IPR005517 (6.3%) IPR035649 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translation elongation factor EFG/EF2, domain IV (6.3%) EFG, domain V (6.3%)" TTPFTETHIALGAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (14.7%) GO:0032259 (11%) GO:0006546 (0.7%)" "GO:0005829 (15.4%) GO:0005960 (15.4%)" "GO:0004047 (15.4%) GO:0008483 (15.4%) GO:0008168 (11%)" "glycine decarboxylation via glycine cleavage system (14.7%) methylation (11%) glycine catabolic process (0.7%)" "cytosol (15.4%) glycine cleavage complex (15.4%)" "aminomethyltransferase activity (15.4%) transaminase activity (15.4%) methyltransferase activity (11%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" AGQTSMIAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006094 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004332 (20%) GO:0008270 (20%) GO:0016829 (0.1%)" "gluconeogenesis (20%) glycolytic process (20%)" cytosol (20%) "fructose-bisphosphate aldolase activity (20%) zinc ion binding (20%) lyase activity (0.1%)" "IPR006411 (33.5%) IPR013785 (33.5%) IPR000771 (33.1%)" "Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype (33.5%) Aldolase-type TIM barrel (33.5%) Fructose-bisphosphate aldolase, class-II (33.1%)" EACGLGLKEAKDMVDGAPSTVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" HAEFLAQDDGVIHLLHVLPGSASLSLHR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006950 (14.3%) GO:1902021 (14.3%)" GO:0005737 (14.3%) "GO:0004017 (14.3%) GO:0004672 (14.3%) GO:0042803 (14.3%)" "response to stress (14.3%) regulation of bacterial-type flagellum-dependent cell motility (14.3%)" cytoplasm (14.3%) "AMP kinase activity (14.3%) protein kinase activity (14.3%) protein homodimerization activity (14.3%)" "IPR006016 (34.5%) IPR014729 (34.5%) IPR006015 (31.1%)" "UspA (34.5%) Rossmann-like alpha/beta/alpha sandwich fold (34.5%) Universal stress protein A family (31.1%)" EVAAQQVSDQQLETAR root 6.3.5.4 (100%) asparagine synthase (glutamine-hydrolyzing) (100%) "GO:0006529 (24.6%) GO:0070981 (0.4%) GO:0006541 (0.2%)" "GO:0005829 (24.8%) GO:0005737 (0.2%)" "GO:0004066 (24.8%) GO:0005524 (23.4%) GO:0016874 (0.5%)" "obsolete asparagine biosynthetic process (24.6%) L-asparagine biosynthetic process (0.4%) glutamine metabolic process (0.2%)" "cytosol (24.8%) cytoplasm (0.2%)" "asparagine synthase (glutamine-hydrolyzing) activity (24.8%) ATP binding (23.4%) ligase activity (0.5%)" "IPR014729 (15.2%) IPR050795 (15.2%) IPR001962 (14.8%)" "Rossmann-like alpha/beta/alpha sandwich fold (15.2%) Asparagine Synthetase (15.2%) Asparagine synthase (14.8%)" VMTGENIGTLVHN Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.4.22 (100%) UMP kinase (100%) "GO:0006225 (20%) GO:0044210 (20%)" GO:0005737 (20%) "GO:0005524 (20%) GO:0033862 (20%)" "UDP biosynthetic process (20%) 'de novo' CTP biosynthetic process (20%)" cytoplasm (20%) "ATP binding (20%) UMP kinase activity (20%)" "IPR001048 (25%) IPR011817 (25%) IPR015963 (25%)" "Aspartate/glutamate/uridylate kinase (25%) Uridylate kinase (25%) Uridylate kinase, bacteria (25%)" VVSWYDNEWGYSNKVCEMAR Pseudomonadati Bacteria Pseudomonadati "1.2.1.- (93.3%) 1.2.1.12 (6.7%)" "With NAD(+) or NADP(+) as acceptor (93.3%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (6.7%)" "GO:0006096 (16.8%) GO:0006006 (16.2%)" GO:0005737 (16.8%) "GO:0051287 (16.8%) GO:0050661 (16.2%) GO:0004365 (9.2%)" "glycolytic process (16.8%) glucose metabolic process (16.2%)" cytoplasm (16.8%) "NAD binding (16.8%) NADP binding (16.2%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (9.2%)" "IPR020829 (17.1%) IPR020831 (17.1%) IPR020828 (16.6%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.1%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.1%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.6%)" NVGETPNGYRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006355 (0.6%) "GO:0003700 (49.7%) GO:0043565 (49.1%) GO:0000976 (0.6%)" regulation of DNA-templated transcription (0.6%) "DNA-binding transcription factor activity (49.7%) sequence-specific DNA binding (49.1%) transcription cis-regulatory region binding (0.6%)" "IPR018060 (50.3%) IPR009057 (49.7%)" "AraC-like, DNA binding HTH domain (50.3%) Homedomain-like superfamily (49.7%)" ALIMGMNSEKGFEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032790 (25.3%) "GO:0003746 (25.3%) GO:0005525 (25.3%) GO:0003924 (24.2%)" ribosome disassembly (25.3%) "translation elongation factor activity (25.3%) GTP binding (25.3%) GTPase activity (24.2%)" "IPR000640 (7.8%) IPR005517 (7.8%) IPR014721 (7.8%)" "Elongation factor EFG, domain V-like (7.8%) Translation elongation factor EFG/EF2, domain IV (7.8%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (7.8%)" SHTTVLAIPENTPFNRFNEVKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006015 (48.6%) IPR006016 (48.6%) IPR014729 (2.9%)" "Universal stress protein A family (48.6%) UspA (48.6%) Rossmann-like alpha/beta/alpha sandwich fold (2.9%)" TKEPGANGEPLYLDVK Bacteria Bacteria "1.2.7.1 (74.5%) 1.2.7.- (21.8%) 1.2.1.51 (3.6%)" "pyruvate synthase (74.5%) With an iron-sulfur protein as acceptor (21.8%) pyruvate dehydrogenase (NADP(+)) (3.6%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (11.6%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.4%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (11.6%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.4%)" "IPR002869 (7.7%) IPR009014 (7.7%) IPR011895 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%) Pyruvate-flavodoxin oxidoreductase (7.7%)" VLADGGSLIIMSHMGKPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%)" GO:0005829 (16.5%) "GO:0004618 (16.5%) GO:0005524 (16.5%) GO:0043531 (16.5%)" "gluconeogenesis (16.5%) glycolytic process (16.5%)" cytosol (16.5%) "phosphoglycerate kinase activity (16.5%) ATP binding (16.5%) ADP binding (16.5%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" SYPLDIHNVQDHLK root 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0006879 (14.3%) GO:0030261 (14.3%) GO:0006950 (0%)" "GO:0005737 (14.3%) GO:0009295 (13.6%) GO:0016020 (0%)" "GO:0008199 (14.5%) GO:0016722 (14.4%) GO:0003677 (14.3%)" "intracellular iron ion homeostasis (14.3%) chromosome condensation (14.3%) response to stress (0%)" "cytoplasm (14.3%) nucleoid (13.6%) membrane (0%)" "ferric iron binding (14.5%) oxidoreductase activity, acting on metal ions (14.4%) DNA binding (14.3%)" "IPR002177 (16.7%) IPR008331 (16.7%) IPR009078 (16.7%)" "DNA-binding protein Dps (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like superfamily (16.7%)" IVKANEELAK Bacteria Bacteria "5.4.99.18 (93.8%) 4.1.1.21 (6.3%)" "5-(carboxyamino)imidazole ribonucleotide mutase (93.8%) phosphoribosylaminoimidazole carboxylase (6.3%)" GO:0006189 (29.5%) GO:0016020 (25%) "GO:0034023 (29.5%) GO:0016829 (15.9%)" 'de novo' IMP biosynthetic process (29.5%) membrane (25%) "5-(carboxyamino)imidazole ribonucleotide mutase activity (29.5%) lyase activity (15.9%)" "IPR000031 (31.7%) IPR024694 (31.7%) IPR033747 (31.7%)" "PurE domain (31.7%) PurE, prokaryotic type (31.7%) Class I PurE (31.7%)" FATSDINDLYRR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.5%) GO:0006281 (0%) GO:0006412 (0%)" "GO:0000428 (16.6%) GO:0005829 (3.3%) GO:0009507 (0%)" "GO:0003677 (16.5%) GO:0003899 (16.5%) GO:0000287 (14.8%)" "DNA-templated transcription (16.5%) DNA repair (0%) translation (0%)" "DNA-directed RNA polymerase complex (16.6%) cytosol (3.3%) chloroplast (0%)" "DNA binding (16.5%) DNA-directed RNA polymerase activity (16.5%) magnesium ion binding (14.8%)" "IPR007080 (9.6%) IPR045867 (9.6%) IPR006592 (9.4%)" "RNA polymerase Rpb1, domain 1 (9.6%) DNA-directed RNA polymerase, subunit beta-prime (9.6%) RNA polymerase, N-terminal (9.4%)" LNSAAISDYAPNGLQVEGK root "GO:0006281 (28.3%) GO:0005975 (0.1%) GO:0010212 (0.1%)" "GO:0005737 (29.2%) GO:0005829 (0.1%) GO:0060187 (0.1%)" "GO:0046872 (29.3%) GO:0016787 (12.9%) GO:0005524 (0.1%)" "DNA repair (28.3%) carbohydrate metabolic process (0.1%) response to ionizing radiation (0.1%)" "cytoplasm (29.2%) cytosol (0.1%) cell pole (0.1%)" "metal ion binding (29.3%) hydrolase activity (12.9%) ATP binding (0.1%)" "IPR036069 (49.7%) IPR002678 (49.6%) IPR003778 (0.1%)" "DUF34/NIF3 superfamily (49.7%) DUF34/NIF3 (49.6%) Carboxyltransferase domain, subdomain A and B (0.1%)" MYNDPALNPVLYGKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR025350 (100%) Protein of unknown function DUF4254 (100%) GHNSMLVLRPADVEETTIAWK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.2.1.1 (96.7%) 2.2.1.- (3.3%)" "transketolase (96.7%) Transketolases and transaldolases (3.3%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.8%) IPR005475 (12.8%) IPR009014 (12.8%)" "Transketolase, N-terminal (12.8%) Transketolase-like, pyrimidine-binding domain (12.8%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.8%)" TNDNAGDGTTTATVLAQSIIGVGLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.2%) GO:0005737 (15.6%) "GO:0005524 (17.2%) GO:0016853 (17.2%) GO:0140662 (17.2%)" protein refolding (17.2%) cytoplasm (15.6%) "ATP binding (17.2%) isomerase activity (17.2%) ATP-dependent protein folding chaperone (17.2%)" "IPR001844 (17.1%) IPR002423 (17.1%) IPR027409 (17.1%)" "Chaperonin Cpn60/GroEL (17.1%) Chaperonin Cpn60/GroEL/TCP-1 family (17.1%) GroEL-like apical domain superfamily (17.1%)" AQSELQALNK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" RLADDLIGATSDTSCLVGYSSAMR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.7%) GO:0006531 (24.7%)" GO:0005829 (24.7%) "GO:0008797 (24.7%) GO:0016853 (1.3%)" "tricarboxylic acid cycle (24.7%) aspartate metabolic process (24.7%)" cytosol (24.7%) "aspartate ammonia-lyase activity (24.7%) isomerase activity (1.3%)" "IPR000362 (12.6%) IPR008948 (12.6%) IPR018951 (12.6%)" "Fumarate lyase family (12.6%) L-Aspartase-like (12.6%) Fumarase C, C-terminal (12.6%)" ADPWENIEERFPVGSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" HLESQLSQAANWEYCAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.1 (60%) 1.2.1.51 (20%) 1.2.7.- (20%)" "pyruvate synthase (60%) pyruvate dehydrogenase (NADP(+)) (20%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (11.2%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (11.2%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" AILWHDETMGADYSVEEIPANLVDEANEWREK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0032790 (20.5%) GO:0006412 (1.2%)" GO:0005737 (19.3%) "GO:0005525 (20.5%) GO:0003746 (19.3%) GO:0003924 (19.3%)" "ribosome disassembly (20.5%) translation (1.2%)" cytoplasm (19.3%) "GTP binding (20.5%) translation elongation factor activity (19.3%) GTPase activity (19.3%)" "IPR027417 (6.6%) IPR000640 (6.2%) IPR000795 (6.2%)" "P-loop containing nucleoside triphosphate hydrolase (6.6%) Elongation factor EFG, domain V-like (6.2%) Translational (tr)-type GTP-binding domain (6.2%)" VTTHNLQVLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" ATAGTEVYVAGVRPSVSDTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) SMITPDFIGHTFAVHDGRK Bacteria Bacteria "GO:0006412 (16.7%) GO:0000028 (16.6%)" "GO:0005737 (16.6%) GO:0015935 (16.6%) GO:0005840 (0.2%)" "GO:0003735 (16.7%) GO:0019843 (16.6%)" "translation (16.7%) ribosomal small subunit assembly (16.6%)" "cytoplasm (16.6%) small ribosomal subunit (16.6%) ribosome (0.2%)" "structural constituent of ribosome (16.7%) rRNA binding (16.6%)" "IPR002222 (25.1%) IPR023575 (25.1%) IPR005732 (24.9%)" "Small ribosomal subunit protein uS19 (25.1%) Small ribosomal subunit protein uS19, superfamily (25.1%) Small ribosomal subunit protein uS19, bacteria (24.9%)" LKDLETQSQDGTFDKLTK root "GO:0006412 (32.9%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0022627 (33%) GO:0005840 (0.8%) GO:0005737 (0.1%)" "GO:0003735 (33%) GO:0008270 (0.1%)" "translation (32.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (33%) ribosome (0.8%) cytoplasm (0.1%)" "structural constituent of ribosome (33%) zinc ion binding (0.1%)" "IPR001865 (25%) IPR005706 (25%) IPR023591 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25%)" LVVYHSQTAPLIDWYKQDGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.4.3 (100%) adenylate kinase (100%) GO:0044209 (24%) GO:0005737 (24%) "GO:0004017 (24%) GO:0005524 (24%) GO:0016301 (4%)" AMP salvage (24%) cytoplasm (24%) "AMP kinase activity (24%) ATP binding (24%) kinase activity (4%)" "IPR000850 (33.3%) IPR027417 (33.3%) IPR033690 (33.3%)" "Adenylate kinase/UMP-CMP kinase (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%) Adenylate kinase, conserved site (33.3%)" ALRESEMWQTAVTVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.86 (93.9%) 1.1.1.- (6.1%)" "ketol-acid reductoisomerase (NADP(+)) (93.9%) With NAD(+) or NADP(+) as acceptor (6.1%)" "GO:0009097 (21.1%) GO:0009099 (21.1%)" GO:0070013 (0.5%) "GO:0004455 (21.1%) GO:0046872 (20.4%) GO:0016853 (15.6%)" "isoleucine biosynthetic process (21.1%) L-valine biosynthetic process (21.1%)" intracellular organelle lumen (0.5%) "ketol-acid reductoisomerase activity (21.1%) metal ion binding (20.4%) isomerase activity (15.6%)" "IPR000506 (16.9%) IPR008927 (16.9%) IPR013328 (16.9%)" "Ketol-acid reductoisomerase, C-terminal (16.9%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.9%) 6-phosphogluconate dehydrogenase, domain 2 (16.9%)" ILFGMNELGNTSDKPYKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (12.7%) GO:0006261 (11.9%)" "GO:0005737 (12.7%) GO:0009330 (12.7%) GO:0005694 (11.9%)" "GO:0003677 (12.7%) GO:0005524 (12.7%) GO:0034335 (11.9%)" "DNA topological change (12.7%) DNA-templated DNA replication (11.9%)" "cytoplasm (12.7%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.7%) chromosome (11.9%)" "DNA binding (12.7%) ATP binding (12.7%) DNA negative supercoiling activity (11.9%)" "IPR002205 (12.7%) IPR013758 (12.7%) IPR013760 (12.7%)" "DNA topoisomerase, type IIA, domain A (12.7%) DNA topoisomerase, type IIA, domain A, alpha-beta (12.7%) DNA topoisomerase, type IIA-like domain superfamily (12.7%)" YNQVIDTWTHVNSDLSDILYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0000287 (16.3%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) magnesium ion binding (16.3%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" ENVHILNGNAEDLEAECANYEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.4%) GO:0006043 (14.4%) GO:0006046 (14.4%)" "GO:0005829 (12.7%) GO:0005737 (0.8%)" "GO:0004342 (14.4%) GO:0042802 (14.4%)" "carbohydrate metabolic process (14.4%) glucosamine catabolic process (14.4%) N-acetylglucosamine catabolic process (14.4%)" "cytosol (12.7%) cytoplasm (0.8%)" "glucosamine-6-phosphate deaminase activity (14.4%) identical protein binding (14.4%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" YRLEKEDPIDILEVDNTAVR Bacteria Bacteria 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (19.8%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (19.8%)" "IPR006099 (16.8%) IPR016176 (16.8%) IPR006098 (16.6%)" "Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.8%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (16.8%) Methylmalonyl-CoA mutase, alpha chain, catalytic (16.6%)" TQSAFSEGGLPVGAGLEDLGK root TLDCVLDRMNLDWIPVEK Alistipes ihumii AP11 Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Rikenellaceae Alistipes Alistipes ihumii Alistipes ihumii AP11 5.4.2.11 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (100%) SGTLGIGFIGGHNAMVALYGEGHGHSQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.17.4.2 (100%) ribonucleoside-triphosphate reductase (thioredoxin) (100%) "GO:0006260 (16.5%) GO:0009265 (16.5%)" GO:0031250 (16.5%) "GO:0005524 (16.5%) GO:0008998 (16.5%) GO:0004748 (16%)" "DNA replication (16.5%) 2'-deoxyribonucleotide biosynthetic process (16.5%)" anaerobic ribonucleoside-triphosphate reductase complex (16.5%) "ATP binding (16.5%) ribonucleoside-triphosphate reductase (thioredoxin) activity (16.5%) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16%)" "IPR005144 (50%) IPR012833 (50%)" "ATP-cone domain (50%) Ribonucleoside-triphosphate reductase, anaerobic (50%)" AASQFEALRLETEASGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" LFLGSYPITPATDILHELSK Pseudomonadati Bacteria Pseudomonadati "1.2.-.- (42.9%) 1.2.7.3 (42.9%) 1.2.7.11 (14.3%)" "Acting on the aldehyde or oxo group of donors (42.9%) 2-oxoglutarate synthase (42.9%) 2-oxoacid oxidoreductase (ferredoxin) (14.3%)" GO:0006979 (50%) "GO:0016903 (48.2%) GO:0047553 (1.2%) GO:0016491 (0.6%)" response to oxidative stress (50%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors (48.2%) 2-oxoglutarate synthase activity (1.2%) oxidoreductase activity (0.6%)" "IPR002880 (13.3%) IPR029061 (13.3%) IPR050722 (13.3%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (13.3%) Thiamin diphosphate-binding fold (13.3%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (13.3%)" SFQYEHTQSR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "3.4.-.- (33.3%) 3.4.14.- (33.3%) 3.4.19.1 (33.3%)" "Acting on peptide bonds (peptidases) (33.3%) Dipeptidyl-peptidases and tripeptidyl-peptidases (33.3%) acylaminoacyl-peptidase (33.3%)" GO:0006508 (36.5%) "GO:0008236 (26%) GO:0008239 (26%) GO:0004252 (10.5%)" proteolysis (36.5%) "serine-type peptidase activity (26%) dipeptidyl-peptidase activity (26%) serine-type endopeptidase activity (10.5%)" "IPR001375 (36.7%) IPR029058 (36.7%) IPR050278 (26.1%)" "Peptidase S9, prolyl oligopeptidase, catalytic domain (36.7%) Alpha/Beta hydrolase fold (36.7%) Serine protease S9B/DPPIV (26.1%)" ISAFDVILPEGIPYKGQMLNQIAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" NNASPADPQVH root "GO:0042026 (24.8%) GO:0006457 (0.1%) GO:0006979 (0%)" "GO:0005737 (25%) GO:0005829 (0%)" "GO:0051082 (25%) GO:0044183 (24.8%) GO:0008270 (0%)" "protein refolding (24.8%) protein folding (0.1%) response to oxidative stress (0%)" "cytoplasm (25%) cytosol (0%)" "unfolded protein binding (25%) protein folding chaperone (24.8%) zinc ion binding (0%)" "IPR016154 (25.1%) IPR000397 (25.1%) IPR023212 (24.9%)" "Heat shock protein Hsp33, C-terminal (25.1%) Heat shock protein Hsp33 (25.1%) Heat shock protein Hsp33, helix hairpin bin domain superfamily (24.9%)" MSENVGVER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001857 (25%) IPR008991 (25%) IPR018257 (25%)" "Large ribosomal subunit protein bL19 (25%) Translation protein SH3-like domain superfamily (25%) Large ribosomal subunit protein bL19, conserved site (25%)" KEGYEQIAAIFTETADQEKEHAKR Pseudomonadati Bacteria Pseudomonadati "1.11.1.1 (50%) 1.14.13.81 (50%)" "NADH peroxidase (50%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (50%)" "GO:0005506 (50%) GO:0016491 (49.4%) GO:0048529 (0.6%)" "iron ion binding (50%) oxidoreductase activity (49.4%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity (0.6%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" SAVVNFSDIYAMNGTPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.4.16 (100%) thiamine-phosphate kinase (100%) "GO:0009228 (21.5%) GO:0009229 (18.8%)" "GO:0009030 (21.5%) GO:0000287 (18.8%) GO:0005524 (18.8%)" "thiamine biosynthetic process (21.5%) thiamine diphosphate biosynthetic process (18.8%)" "thiamine-phosphate kinase activity (21.5%) magnesium ion binding (18.8%) ATP binding (18.8%)" "IPR006283 (23%) IPR016188 (23%) IPR036676 (23%)" "Thiamine-monophosphate kinase-like (23%) PurM-like, N-terminal domain (23%) PurM-like, C-terminal domain superfamily (23%)" SKICQITGKR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001383 (25%) IPR026569 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL28, bacteria (25%) Large ribosomal subunit protein bL28 (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" YKPNFTPHVDCGDNVIIINADKVVLTGNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (20%) GO:0017148 (20%)" GO:0022625 (20%) "GO:0003729 (20%) GO:0003735 (20%)" "translation (20%) negative regulation of translation (20%)" cytosolic large ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%)" "IPR005822 (26.8%) IPR005823 (26.8%) IPR036899 (26.8%)" "Large ribosomal subunit protein uL13 (26.8%) Large ribosomal subunit protein uL13, bacteria (26.8%) Large ribosomal subunit protein uL13 superfamily (26.8%)" QSFYAAFYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (0.4%) "GO:0003700 (49.8%) GO:0043565 (49.5%) GO:0000976 (0.4%)" regulation of DNA-templated transcription (0.4%) "DNA-binding transcription factor activity (49.8%) sequence-specific DNA binding (49.5%) transcription cis-regulatory region binding (0.4%)" "IPR018060 (49.6%) IPR009057 (49.3%) IPR020449 (1.1%)" "AraC-like, DNA binding HTH domain (49.6%) Homedomain-like superfamily (49.3%) Transcription regulator HTH, AraC- type, HTH domain (1.1%)" LKAEEQAADQVAYQQAVQAIKDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR025347 (100%) Protein of unknown function DUF4251 (100%) YADVNDYVAELAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.2 (100%) glucokinase (100%) "GO:0004340 (80%) GO:0016301 (20%)" "glucokinase activity (80%) kinase activity (20%)" "IPR000600 (33.3%) IPR043129 (33.3%) IPR049874 (33.3%)" "ROK family (33.3%) ATPase, nucleotide binding domain (33.3%) ROK, conserved site (33.3%)" EAQAVLNIPVTDAYEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.13 (100%) arabinose-5-phosphate isomerase (100%) GO:1901135 (39.5%) "GO:0097367 (39.5%) GO:0016853 (14.5%) GO:0019146 (6.6%)" carbohydrate derivative metabolic process (39.5%) "carbohydrate derivative binding (39.5%) isomerase activity (14.5%) arabinose-5-phosphate isomerase activity (6.6%)" "IPR001347 (33.3%) IPR035474 (33.3%) IPR046348 (33.3%)" "SIS domain (33.3%) KpsF-like, SIS domain (33.3%) SIS domain superfamily (33.3%)" INTIASEHPELTNYLYMTYDGTPHDITYYPNEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (14%) GO:0006526 (14%) GO:0006541 (14%)" GO:0005737 (14%) "GO:0004088 (14%) GO:0005524 (14%) GO:0046872 (14%)" "pyrimidine nucleotide biosynthetic process (14%) L-arginine biosynthetic process (14%) glutamine metabolic process (14%)" cytoplasm (14%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14%) ATP binding (14%) metal ion binding (14%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" NGLKVEDADIENFAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" DTLHLEGKELEFK root "GO:0006412 (24.7%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.6%) GO:0005840 (0.6%) GO:1990904 (0.2%)" "GO:0003735 (24.7%) GO:0003729 (24.7%) GO:0016491 (0.1%)" "translation (24.7%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.6%) ribosome (0.6%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (24.7%) mRNA binding (24.7%) oxidoreductase activity (0.1%)" "IPR003029 (20.2%) IPR012340 (20.2%) IPR050437 (20.2%)" "S1 domain (20.2%) Nucleic acid-binding, OB-fold (20.2%) Small ribosomal subunit protein bS1-like (20.2%)" VGSLFTPVGFHPVLER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (25.9%) GO:0003863 (7.4%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (25.9%) branched-chain 2-oxo acid dehydrogenase activity (7.4%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" ADGINPEELLGNSSAAAPR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0005829 (10.9%) GO:0009295 (10.9%) GO:0032993 (10.9%)" "GO:0000976 (10.9%) GO:0001217 (10.9%) GO:0003680 (10.9%)" "cytosol (10.9%) nucleoid (10.9%) protein-DNA complex (10.9%)" "transcription cis-regulatory region binding (10.9%) DNA-binding transcription repressor activity (10.9%) minor groove of adenine-thymine-rich DNA binding (10.9%)" "IPR027444 (20.2%) IPR037150 (20.2%) IPR027454 (20%)" "DNA-binding protein H-NS-like, C-terminal domain (20.2%) Histone-like protein H-NS, C-terminal domain superfamily (20.2%) Histone-like protein H-NS, N-terminal (20%)" IVEESPSPFLTPELRQEMGEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.3.4.14 (87%) 6.4.1.2 (13%)" "biotin carboxylase (87%) acetyl-CoA carboxylase (13%)" GO:2001295 (13.9%) "GO:0005524 (24.4%) GO:0046872 (24.4%) GO:0003989 (15%)" malonyl-CoA biosynthetic process (13.9%) "ATP binding (24.4%) metal ion binding (24.4%) acetyl-CoA carboxylase activity (15%)" "IPR005479 (13.3%) IPR011761 (13.3%) IPR011764 (13.3%)" "Carbamoyl phosphate synthase, ATP-binding domain (13.3%) ATP-grasp fold (13.3%) Biotin carboxylation domain (13.3%)" NAEFLASYIKDLTGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) "GO:0005975 (25%) GO:0030203 (25%)" GO:0016020 (25%) GO:0004563 (25%) "carbohydrate metabolic process (25%) glycosaminoglycan metabolic process (25%)" membrane (25%) beta-N-acetylhexosaminidase activity (25%) "IPR000421 (13.1%) IPR008979 (13.1%) IPR015882 (13.1%)" "Coagulation factor 5/8, C-terminal domain (13.1%) Galactose-binding-like domain superfamily (13.1%) Beta-hexosaminidase, bacterial type, N-terminal (13.1%)" RSQWIIGGDGASYDIGYGGLDHVIASGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (78%) 1.2.7.- (22%)" "pyruvate synthase (78%) With an iron-sulfur protein as acceptor (22%)" "GO:0006979 (14.8%) GO:0022900 (14.5%) GO:0044281 (11.9%)" "GO:0030976 (14.7%) GO:0005506 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.8%) electron transport chain (14.5%) small molecule metabolic process (11.9%)" "thiamine pyrophosphate binding (14.7%) iron ion binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR029061 (7.8%) IPR050722 (7.8%) IPR011766 (7.8%)" "Thiamin diphosphate-binding fold (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%) Thiamine pyrophosphate enzyme, TPP-binding (7.8%)" VGDLFDKETFAEK root 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.6%) GO:0046040 (16.6%) GO:0006164 (0%)" "GO:0005737 (16.6%) GO:0016020 (0.1%) GO:0005829 (0%)" "GO:0004019 (16.6%) GO:0005525 (16.6%) GO:0000287 (13%)" "'de novo' AMP biosynthetic process (16.6%) IMP metabolic process (16.6%) purine nucleotide biosynthetic process (0%)" "cytoplasm (16.6%) membrane (0.1%) cytosol (0%)" "adenylosuccinate synthase activity (16.6%) GTP binding (16.6%) magnesium ion binding (13%)" "IPR001114 (15.5%) IPR027417 (15.5%) IPR033128 (15.5%)" "Adenylosuccinate synthetase (15.5%) P-loop containing nucleoside triphosphate hydrolase (15.5%) Adenylosuccinate synthase, active site (15.5%)" INHLIFTNVDMLQNNIHVVTTHIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR002575 (33.3%) IPR011009 (33.3%) IPR050249 (33.3%)" "Aminoglycoside phosphotransferase (33.3%) Protein kinase-like domain superfamily (33.3%) Pseudomonas-type Homoserine Kinase (33.3%)" NAIDWLSRLPDQPLAGKPVLIQTSSMGVIGGAR root "1.6.5.2 (97.5%) 1.6.-.- (2.5%)" "NAD(P)H dehydrogenase (quinone) (97.5%) Acting on NADH or NADPH (2.5%)" "GO:0006805 (0.3%) GO:0051289 (0.3%)" GO:0005829 (31.9%) "GO:0010181 (31.9%) GO:0016491 (27.4%) GO:0050446 (4%)" "xenobiotic metabolic process (0.3%) protein homotetramerization (0.3%)" cytosol (31.9%) "FMN binding (31.9%) oxidoreductase activity (27.4%) azobenzene reductase (NADP+) activity (4%)" "IPR005025 (33.3%) IPR029039 (33.3%) IPR050712 (33.3%)" "NADPH-dependent FMN reductase-like domain (33.3%) Flavoprotein-like superfamily (33.3%) NAD(P)H-dependent reductase (33.3%)" NCFATADAEATEKVEAVKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.2.2 (66.7%) 5.4.2.- (33.3%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (66.7%) Phosphotransferases (phosphomutases) (33.3%)" "GO:0005975 (24.1%) GO:0006166 (24.1%)" "GO:0000287 (24.1%) GO:0008973 (24.1%) GO:0004614 (3.4%)" "carbohydrate metabolic process (24.1%) purine ribonucleoside salvage (24.1%)" "magnesium ion binding (24.1%) phosphopentomutase activity (24.1%) phosphoglucomutase activity (3.4%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" SYAHLCALRDEVIAMGVLPPVSEWNKLNPYIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (34.6%) "GO:0016615 (30.8%) GO:0016616 (30.8%) GO:0030060 (3.8%)" malate metabolic process (34.6%) "malate dehydrogenase activity (30.8%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (30.8%) L-malate dehydrogenase (NAD+) activity (3.8%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" LSEFGIQSEDFPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.1 (66.7%) 1.1.1.202 (33.3%)" "alcohol dehydrogenase (66.7%) 1,3-propanediol dehydrogenase (33.3%)" "GO:0004022 (48.4%) GO:0046872 (48.4%) GO:0047516 (3.2%)" "alcohol dehydrogenase (NAD+) activity (48.4%) metal ion binding (48.4%) 1,3-propanediol dehydrogenase activity (3.2%)" "IPR001670 (33.3%) IPR039697 (33.3%) IPR056798 (33.3%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (33.3%) Iron-type alcohol dehydrogenase-like (33.3%) Fe-containing alcohol dehydrogenase-like, C-terminal (33.3%)" IKEVSLILVITGDK MIAPILDEIADEYQGKLTVAK root "GO:0045454 (33%) GO:0006353 (0.1%)" "GO:0005829 (33%) GO:0005737 (0.1%)" "GO:0015035 (33.2%) GO:0003723 (0.1%) GO:0004386 (0.1%)" "cell redox homeostasis (33%) DNA-templated transcription termination (0.1%)" "cytosol (33%) cytoplasm (0.1%)" "protein-disulfide reductase activity (33.2%) RNA binding (0.1%) helicase activity (0.1%)" "IPR013766 (24.9%) IPR036249 (24.9%) IPR005746 (24.8%)" "Thioredoxin domain (24.9%) Thioredoxin-like superfamily (24.9%) Thioredoxin (24.8%)" YAEGYPEKR root 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.4%) GO:0035999 (15.4%) GO:0032259 (11.2%)" "GO:0005829 (15.4%) GO:0016020 (0.2%)" "GO:0004372 (15.4%) GO:0030170 (15.4%) GO:0008168 (11.2%)" "glycine biosynthetic process from serine (15.4%) tetrahydrofolate interconversion (15.4%) methylation (11.2%)" "cytosol (15.4%) membrane (0.2%)" "glycine hydroxymethyltransferase activity (15.4%) pyridoxal phosphate binding (15.4%) methyltransferase activity (11.2%)" "IPR039429 (14.5%) IPR049943 (14.5%) IPR015421 (14.3%)" "Serine hydroxymethyltransferase-like domain (14.5%) Serine hydroxymethyltransferase-like (14.5%) Pyridoxal phosphate-dependent transferase, major domain (14.3%)" VLANDLYPDEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.28 (100%) D-lactate dehydrogenase (100%) "GO:0008720 (47.6%) GO:0051287 (47.6%) GO:0016787 (4.8%)" "D-lactate dehydrogenase (NAD+) activity (47.6%) NAD binding (47.6%) hydrolase activity (4.8%)" "IPR006139 (25%) IPR006140 (25%) IPR029753 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (25%)" IHDLPDPEKLDNLAQFIAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.1.13.1 (98.8%) 3.1.-.- (1.3%)" "exoribonuclease II (98.8%) Acting on ester bonds (1.3%)" GO:0006402 (24.8%) GO:0005829 (24.8%) "GO:0003723 (24.8%) GO:0008859 (24.1%) GO:0004527 (0.6%)" mRNA catabolic process (24.8%) cytosol (24.8%) "RNA binding (24.8%) exoribonuclease II activity (24.1%) exonuclease activity (0.6%)" "IPR001900 (12.7%) IPR012340 (12.7%) IPR040476 (12.7%)" "Ribonuclease II/R (12.7%) Nucleic acid-binding, OB-fold (12.7%) RNase II/RNase R, cold shock domain (12.7%)" RGVAAFVPEWNAENCIQCNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (72.4%) 1.2.7.- (24.1%) 1.2.1.51 (3.4%)" "pyruvate synthase (72.4%) With an iron-sulfur protein as acceptor (24.1%) pyruvate dehydrogenase (NADP(+)) (3.4%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (11.5%)" "GO:0005506 (14.7%) GO:0030976 (14.7%) GO:0051539 (14.7%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (11.5%)" "iron ion binding (14.7%) thiamine pyrophosphate binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" LHTYRDAIPTQSVLTITSNVVYGKK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (28.4%) GO:0044814 (0.3%)" "GO:0005829 (33%) GO:0016020 (0.3%)" "GO:0008861 (33%) GO:0016829 (4.1%) GO:0016746 (0.9%)" "glucose metabolic process (28.4%) pyruvate fermentation via PFL (0.3%)" "cytosol (33%) membrane (0.3%)" "formate C-acetyltransferase activity (33%) lyase activity (4.1%) acyltransferase activity (0.9%)" "IPR004184 (21%) IPR050244 (21%) IPR001150 (20.1%)" "Pyruvate formate lyase domain (21%) Autonomous Glycyl Radical Cofactor (21%) Glycine radical domain (20.1%)" DLDWGIPVPVEGAEGK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) "GO:0005829 (16.7%) GO:0016020 (0%)" "GO:0004825 (16.7%) GO:0005524 (16.7%) GO:0000049 (16.5%)" methionyl-tRNA aminoacylation (16.7%) "cytosol (16.7%) membrane (0%)" "methionine-tRNA ligase activity (16.7%) ATP binding (16.7%) tRNA binding (16.5%)" "IPR014758 (8.4%) IPR015413 (8.4%) IPR023458 (8.4%)" "Methionyl-tRNA synthetase (8.4%) Methionyl/Leucyl tRNA synthetase (8.4%) Methionine-tRNA ligase, type 1 (8.4%)" ASELYPNCYR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (60%) IPR019734 (40%)" "Tetratricopeptide-like helical domain superfamily (60%) Tetratricopeptide repeat (40%)" DNLIFDIIEKEHQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (16.4%) GO:0035999 (16.4%) GO:0032259 (7.8%)" GO:0005829 (16.4%) "GO:0004372 (16.4%) GO:0030170 (16.4%) GO:0008168 (7.8%)" "glycine biosynthetic process from serine (16.4%) tetrahydrofolate interconversion (16.4%) methylation (7.8%)" cytosol (16.4%) "glycine hydroxymethyltransferase activity (16.4%) pyridoxal phosphate binding (16.4%) methyltransferase activity (7.8%)" "IPR001085 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Serine hydroxymethyltransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" VAISELNNIIADRVSITSLLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.6%) GO:0015966 (12.2%) GO:0044281 (0.3%)" "GO:0005737 (12.6%) GO:0070062 (12.2%) GO:1990742 (12.2%)" "GO:0004820 (12.6%) GO:0005524 (12.6%) GO:0004081 (12.2%)" "glycyl-tRNA aminoacylation (12.6%) diadenosine tetraphosphate biosynthetic process (12.2%) small molecule metabolic process (0.3%)" "cytoplasm (12.6%) extracellular exosome (12.2%) microvesicle (12.2%)" "glycine-tRNA ligase activity (12.6%) ATP binding (12.6%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.2%)" "IPR004154 (11.2%) IPR027031 (11.2%) IPR036621 (11.2%)" "Anticodon-binding (11.2%) Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 (11.2%) Anticodon-binding domain superfamily (11.2%)" SENKQALQVAALK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006207 (21.2%) GO:0006221 (20.5%)" GO:0009347 (21.2%) "GO:0046872 (20.5%) GO:0016740 (16.7%)" "'de novo' pyrimidine nucleobase biosynthetic process (21.2%) pyrimidine nucleotide biosynthetic process (20.5%)" aspartate carbamoyltransferase complex (21.2%) "metal ion binding (20.5%) transferase activity (16.7%)" "IPR002801 (20.2%) IPR020545 (20.2%) IPR036793 (20.2%)" "Aspartate transcarbamylase regulatory subunit (20.2%) Aspartate carbamoyltransferase regulatory subunit, N-terminal (20.2%) Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily (20.2%)" MLTNQSIGYMDAPVPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.5.1.72 (100%) quinolinate synthase (100%) GO:0034628 (20%) GO:0005829 (20%) "GO:0008987 (20%) GO:0046872 (20%) GO:0051539 (20%)" 'de novo' NAD+ biosynthetic process from L-aspartate (20%) cytosol (20%) "quinolinate synthetase A activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR003473 (33.3%) IPR023066 (33.3%) IPR036094 (33.3%)" "Quinolinate synthetase A (33.3%) Quinolinate synthase A, type 2 (33.3%) Quinolinate synthetase A superfamily (33.3%)" NIPIEEAKELGAIALFGEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.2%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.2%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR009000 (9.1%) IPR012947 (9.1%) IPR018163 (9.1%)" "Translation protein, beta-barrel domain superfamily (9.1%) Threonyl/alanyl tRNA synthetase, SAD (9.1%) Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily (9.1%)" IGFQPIDNVNWEAYPYRPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016052 (33.3%) "GO:0004553 (33.3%) GO:0030246 (33.3%)" carbohydrate catabolic process (33.3%) "hydrolase activity, hydrolyzing O-glycosyl compounds (33.3%) carbohydrate binding (33.3%)" IPR010502 (100%) Carbohydrate-binding domain, family 9 (100%) SNDVSLPILVLTAR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.7.13.3 (100%) histidine kinase (100%) "GO:0006355 (3.1%) GO:0045893 (0.2%)" "GO:0005829 (19.3%) GO:0032993 (19.3%) GO:0005737 (0.3%)" "GO:0000156 (19.3%) GO:0000976 (19.3%) GO:0001216 (16.8%)" "regulation of DNA-templated transcription (3.1%) positive regulation of DNA-templated transcription (0.2%)" "cytosol (19.3%) protein-DNA complex (19.3%) cytoplasm (0.3%)" "phosphorelay response regulator activity (19.3%) transcription cis-regulatory region binding (19.3%) DNA-binding transcription activator activity (16.8%)" "IPR001789 (19.9%) IPR011006 (19.9%) IPR039420 (19.6%)" "Signal transduction response regulator, receiver domain (19.9%) CheY-like superfamily (19.9%) Transcriptional regulatory protein WalR-like (19.6%)" VLFEHNAVGLYGENGVEGVHLVK Bacteria Bacteria 1.8.1.9 (100%) thioredoxin-disulfide reductase (NADPH) (100%) GO:0019430 (32.8%) GO:0005737 (32.8%) "GO:0004791 (32.8%) GO:0016491 (1.6%)" removal of superoxide radicals (32.8%) cytoplasm (32.8%) "thioredoxin-disulfide reductase (NADPH) activity (32.8%) oxidoreductase activity (1.6%)" "IPR036188 (20.4%) IPR050097 (20.4%) IPR005982 (19.4%)" "FAD/NAD(P)-binding domain superfamily (20.4%) Ferredoxin--NADP reductase type 2 (20.4%) Thioredoxin reductase (19.4%)" IGILMDTKGPEVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (11.6%) "GO:0000287 (17.7%) GO:0004743 (17.7%) GO:0005524 (17.7%)" response to stress (11.6%) "magnesium ion binding (17.7%) pyruvate kinase activity (17.7%) ATP binding (17.7%)" "IPR001697 (11.2%) IPR011037 (11.2%) IPR015793 (11.2%)" "Pyruvate kinase (11.2%) Pyruvate kinase-like, insert domain superfamily (11.2%) Pyruvate kinase, barrel (11.2%)" GITINTSHVEYETANRHYAHVDCPGHADYVK Bacteria Bacteria 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0%) GO:0006790 (0%)" "GO:0005829 (15.5%) GO:0032045 (10%) GO:0005737 (0.5%)" "GO:0003746 (16.3%) GO:0003924 (16.2%) GO:0005525 (16.2%)" "translational elongation (0%) sulfur compound metabolic process (0%)" "cytosol (15.5%) guanyl-nucleotide exchange factor complex (10%) cytoplasm (0.5%)" "translation elongation factor activity (16.3%) GTPase activity (16.2%) GTP binding (16.2%)" "IPR000795 (8.5%) IPR027417 (8.5%) IPR031157 (8.5%)" "Translational (tr)-type GTP-binding domain (8.5%) P-loop containing nucleoside triphosphate hydrolase (8.5%) Tr-type G domain, conserved site (8.5%)" STLGVLTELCEH Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.1.99.1 (97.3%) 4.4.1.5 (2.7%)" "methylmalonyl-CoA epimerase (97.3%) lactoylglutathione lyase (2.7%)" GO:0046491 (45.6%) "GO:0004493 (45.6%) GO:0016829 (6.8%) GO:0004462 (1%)" L-methylmalonyl-CoA metabolic process (45.6%) "methylmalonyl-CoA epimerase activity (45.6%) lyase activity (6.8%) lactoylglutathione lyase activity (1%)" "IPR029068 (25.1%) IPR037523 (25.1%) IPR051785 (25.1%)" "Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25.1%) Vicinal oxygen chelate (VOC), core domain (25.1%) Methylmalonyl-CoA/ethylmalonyl-CoA epimerase (25.1%)" VKSLEDLPEAEKAAEEKINQIK Parabacteroides gordonii MS-1 = DSM 23371 Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides gordonii Parabacteroides gordonii MS-1 = DSM 23371 "GO:0005975 (25%) GO:0006166 (25%)" "GO:0000287 (25%) GO:0008973 (25%)" "carbohydrate metabolic process (25%) purine ribonucleoside salvage (25%)" "magnesium ion binding (25%) phosphopentomutase activity (25%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" MKSDEAYKEQFIQDYLFASGVADGALK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" VIAPHLIGMSALDQIGIDHAMLALDGTK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" TLAAASSLKLDVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR005484 (35.3%) IPR004389 (32.4%) IPR057268 (32.4%)" "Large ribosomal subunit protein uL18, bacterial/plantae/animalia (35.3%) Large ribosomal subunit protein uL18, bacteria (32.4%) Large ribosomal subunit protein uL18 (32.4%)" AYMSEEGYKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006354 (20%) GO:0032784 (20%)" "GO:0003677 (20%) GO:0003746 (20%) GO:0070063 (20%)" "DNA-templated transcription elongation (20%) regulation of DNA-templated transcription elongation (20%)" "DNA binding (20%) translation elongation factor activity (20%) RNA polymerase binding (20%)" "IPR018151 (12.6%) IPR022691 (12.6%) IPR023459 (12.6%)" "Transcription elongation factor, GreA/GreB, conserved site (12.6%) Transcription elongation factor, GreA/GreB, N-terminal (12.6%) Transcription elongation factor GreA/GreB family (12.6%)" MFIDHLSALR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.5.1.88 (100%) peptide deformylase (100%) "GO:0043686 (26.1%) GO:0006412 (23.9%)" "GO:0042586 (26.1%) GO:0046872 (23.9%)" "obsolete co-translational protein modification (26.1%) translation (23.9%)" "peptide deformylase activity (26.1%) metal ion binding (23.9%)" "IPR023635 (50%) IPR036821 (50%)" "Peptide deformylase (50%) Peptide deformylase superfamily (50%)" IVVAEQNLGQFAGYLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.-.- (44.4%) 1.2.7.3 (44.4%) 1.2.7.11 (11.1%)" "Acting on the aldehyde or oxo group of donors (44.4%) 2-oxoglutarate synthase (44.4%) 2-oxoacid oxidoreductase (ferredoxin) (11.1%)" GO:0006979 (50%) "GO:0016903 (47.9%) GO:0047553 (2.1%)" response to oxidative stress (50%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors (47.9%) 2-oxoglutarate synthase activity (2.1%)" "IPR002869 (12.6%) IPR002880 (12.6%) IPR009014 (12.6%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.6%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.6%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.6%)" HYENVSYETSKLNEYIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.6%) GO:0006164 (0.7%)" GO:0005737 (20.3%) "GO:0004642 (20.3%) GO:0005524 (19.6%) GO:0046872 (19.6%)" "'de novo' IMP biosynthetic process (19.6%) purine nucleotide biosynthetic process (0.7%)" cytoplasm (20.3%) "phosphoribosylformylglycinamidine synthase activity (20.3%) ATP binding (19.6%) metal ion binding (19.6%)" "IPR010918 (11.3%) IPR036676 (11.3%) IPR036921 (11.3%)" "PurM-like, C-terminal domain (11.3%) PurM-like, C-terminal domain superfamily (11.3%) PurM-like, N-terminal domain superfamily (11.3%)" VLVTEVDPICALQAAMEGFEVVTMEDACK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.13.2.1 (95.7%) 3.3.1.1 (4.3%)" "adenosylhomocysteinase (95.7%) Transferred entry: 3.13.2.1 (4.3%)" "GO:0006730 (20%) GO:0033353 (20%) GO:0071269 (20%)" GO:0005829 (20%) GO:0004013 (20%) "one-carbon metabolic process (20%) S-adenosylmethionine cycle (20%) L-homocysteine biosynthetic process (20%)" cytosol (20%) adenosylhomocysteinase activity (20%) "IPR000043 (20%) IPR015878 (20%) IPR020082 (20%)" "Adenosylhomocysteinase-like (20%) S-adenosyl-L-homocysteine hydrolase, NAD binding domain (20%) S-adenosyl-L-homocysteine hydrolase, conserved site (20%)" TIDKSLIHVPSPDTIDKIWIDSDRNIQTLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (48.6%) "GO:0004332 (48.6%) GO:0016829 (2.7%)" glycolytic process (48.6%) "fructose-bisphosphate aldolase activity (48.6%) lyase activity (2.7%)" "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" LAEEKELDLVEISPNAQPPVCR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0032790 (20%) "GO:0005829 (20%) GO:0016020 (20%)" "GO:0003743 (20%) GO:0043022 (20%)" ribosome disassembly (20%) "cytosol (20%) membrane (20%)" "translation initiation factor activity (20%) ribosome binding (20%)" "IPR001288 (16.9%) IPR019814 (16.9%) IPR019815 (16.9%)" "Translation initiation factor 3 (16.9%) Translation initiation factor 3, N-terminal (16.9%) Translation initiation factor 3, C-terminal (16.9%)" LSQYGITPERR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (19.8%) GO:0005737 (19.8%) "GO:0004642 (19.8%) GO:0005524 (19.8%) GO:0046872 (19.8%)" 'de novo' IMP biosynthetic process (19.8%) cytoplasm (19.8%) "phosphoribosylformylglycinamidine synthase activity (19.8%) ATP binding (19.8%) metal ion binding (19.8%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" ATGAIVSGPIPLPTHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20%) "GO:0005840 (19.9%) GO:1990904 (19.9%) GO:0015935 (0.1%)" "GO:0003735 (20%) GO:0000049 (19.4%) GO:0003723 (0.7%)" translation (20%) "ribosome (19.9%) ribonucleoprotein complex (19.9%) small ribosomal subunit (0.1%)" "structural constituent of ribosome (20%) tRNA binding (19.4%) RNA binding (0.7%)" "IPR001848 (25%) IPR027486 (25%) IPR036838 (25%)" "Small ribosomal subunit protein uS10 (25%) Small ribosomal subunit protein uS10 domain (25%) Small ribosomal subunit protein uS10 domain superfamily (25%)" YDDADNKKPGWK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.1%) IPR004154 (11.1%) IPR004499 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Anticodon-binding (11.1%) Proline-tRNA ligase, class IIa, archaeal-type (11.1%)" NEALMTEILHDHAIDTVIHFAGLK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) "GO:0006012 (32.4%) GO:0005975 (0.2%) GO:0005996 (0.2%)" "GO:0005829 (32.4%) GO:0005737 (0.2%)" "GO:0003978 (32.4%) GO:0016853 (0.7%) GO:0016857 (0.2%)" "galactose metabolic process (32.4%) carbohydrate metabolic process (0.2%) monosaccharide metabolic process (0.2%)" "cytosol (32.4%) cytoplasm (0.2%)" "UDP-glucose 4-epimerase activity (32.4%) isomerase activity (0.7%) racemase and epimerase activity, acting on carbohydrates and derivatives (0.2%)" "IPR036291 (34.1%) IPR001509 (33.1%) IPR005886 (31.8%)" "NAD(P)-binding domain superfamily (34.1%) NAD-dependent epimerase/dehydratase (33.1%) UDP-glucose 4-epimerase (31.8%)" DLDVETPADLKQVTEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" AYDMTADPASNSITFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0019867 (50%) GO:2001070 (50%) outer membrane (50%) starch binding (50%) "IPR025970 (50%) IPR032187 (50%)" "SusE outer membrane protein (50%) Outer membrane protein SusF/SusE-like, C-terminal (50%)" TIVSGIAEHYKPEELVGK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004825 (16.7%) GO:0005524 (16.7%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) methionine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR001412 (8.3%) IPR002547 (8.3%) IPR004495 (8.3%)" "Aminoacyl-tRNA synthetase, class I, conserved site (8.3%) tRNA-binding domain (8.3%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.3%)" EAVKEINPDTDSLGSRG Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IYSGGLGVLAGDYIK root "2.4.1.1 (97.9%) 2.4.1.11 (2.1%)" "glycogen phosphorylase (97.9%) glycogen(starch) synthase (2.1%)" "GO:0005975 (30.6%) GO:0005978 (1.9%)" GO:0005886 (0.1%) "GO:0030170 (32.5%) GO:0008184 (31.4%) GO:0004373 (1.9%)" "carbohydrate metabolic process (30.6%) glycogen biosynthetic process (1.9%)" plasma membrane (0.1%) "pyridoxal phosphate binding (32.5%) glycogen phosphorylase activity (31.4%) alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (1.9%)" "IPR052182 (24.7%) IPR011834 (24.3%) IPR024517 (24%)" "Glycogen_Maltodextrin_Phosphorylase (24.7%) Alpha-glucan phosphorylase (24.3%) Glycogen phosphorylase, domain of unknown function DUF3417 (24%)" AIEKDIATQYSR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.14.- (100%) Dipeptidyl-peptidases and tripeptidyl-peptidases (100%) "GO:0006508 (25%) GO:0043171 (25%)" "GO:0008239 (25%) GO:0070009 (25%)" "proteolysis (25%) peptide catabolic process (25%)" "dipeptidyl-peptidase activity (25%) serine-type aminopeptidase activity (25%)" "IPR009003 (33.3%) IPR019500 (33.3%) IPR043504 (33.3%)" "Peptidase S1, PA clan (33.3%) Peptidase S46 (33.3%) Peptidase S1, PA clan, chymotrypsin-like fold (33.3%)" GITTFAMEVVPSMVGTQAAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) GNVSGHSAFLSR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016787 (100%) hydrolase activity (100%) "IPR001466 (20%) IPR005180 (20%) IPR012338 (20%)" "Beta-lactamase-related (20%) Domain of unknown function DUF302 (20%) Beta-lactamase/transpeptidase-like (20%)" SRYTFFASVAK root GO:0006979 (1%) GO:0005737 (1%) "GO:0005506 (49%) GO:0016491 (43.1%) GO:0016692 (4.9%)" response to oxidative stress (1%) cytoplasm (1%) "iron ion binding (49%) oxidoreductase activity (43.1%) NADH peroxidase activity (4.9%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" ESEEAAHNIVMQIAAMNPIAIDEAGVPESVKEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" DIVNLTTVAVVDAIVQEQIEKGE Parabacteroides faecis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides faecis 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) TLVTLACTECKR Coriobacteriia Bacteria Bacillati Actinomycetota Coriobacteriia GO:0006412 (19.9%) "GO:0005840 (20.3%) GO:0005737 (19.9%) GO:1990904 (19.9%)" GO:0003735 (19.9%) translation (19.9%) "ribosome (20.3%) cytoplasm (19.9%) ribonucleoprotein complex (19.9%)" structural constituent of ribosome (19.9%) "IPR001705 (25%) IPR011332 (25%) IPR018264 (25%)" "Large ribosomal subunit protein bL33 (25%) Zinc-binding ribosomal protein (25%) Large ribosomal subunit protein bL33, conserved site (25%)" INPEMHIPEQSSAIHGIYDADVADCPTFK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.7.7 (100%) DNA-directed DNA polymerase (100%) GO:0045004 (24.5%) GO:0005829 (24.5%) "GO:0003676 (24.5%) GO:0008408 (24.5%) GO:0003887 (1.9%)" DNA replication proofreading (24.5%) cytosol (24.5%) "nucleic acid binding (24.5%) 3'-5' exonuclease activity (24.5%) DNA-directed DNA polymerase activity (1.9%)" "IPR012337 (25%) IPR013520 (25%) IPR036397 (25%)" "Ribonuclease H-like superfamily (25%) Ribonuclease H-like domain (25%) Ribonuclease H superfamily (25%)" INLIDTPGHVDFTVEVER root "3.6.5.- (50%) 2.7.7.4 (25%) 3.6.5.3 (25%)" "Acting on GTP; involved in cellular and subcellular movement (50%) sulfate adenylyltransferase (25%) protein-synthesizing GTPase (25%)" "GO:0032790 (16.9%) GO:0070125 (2.7%) GO:0032543 (1.6%)" "GO:0005737 (15.3%) GO:0005759 (2.5%) GO:0005739 (1.8%)" "GO:0003924 (20.1%) GO:0005525 (20.1%) GO:0003746 (18.5%)" "ribosome disassembly (16.9%) mitochondrial translational elongation (2.7%) mitochondrial translation (1.6%)" "cytoplasm (15.3%) mitochondrial matrix (2.5%) mitochondrion (1.8%)" "GTPase activity (20.1%) GTP binding (20.1%) translation elongation factor activity (18.5%)" "IPR000795 (6.6%) IPR005225 (6.6%) IPR027417 (6.6%)" "Translational (tr)-type GTP-binding domain (6.6%) Small GTP-binding domain (6.6%) P-loop containing nucleoside triphosphate hydrolase (6.6%)" QHITDEDIQCVIDALKSDYLTQGPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.92 (100%) UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase (100%) GO:0000271 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" polysaccharide biosynthetic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000653 (20%) IPR015421 (20%) IPR015422 (20%)" "DegT/DnrJ/EryC1/StrS aminotransferase (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" LIHEVNPGAITIAEEVSGMPGLAAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) GO:0005737 (20%) "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (20%)" glycogen biosynthetic process (20%) cytoplasm (20%) "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (20%)" "IPR004193 (12.5%) IPR006047 (12.5%) IPR006048 (12.5%)" "Glycoside hydrolase, family 13, N-terminal (12.5%) Glycosyl hydrolase family 13, catalytic domain (12.5%) Alpha-amylase/branching enzyme, C-terminal all beta (12.5%)" LNTGLAENR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR011990 (49.1%) IPR019734 (47.2%) IPR013105 (3.8%)" "Tetratricopeptide-like helical domain superfamily (49.1%) Tetratricopeptide repeat (47.2%) Tetratricopeptide repeat 2 (3.8%)" ASDYEILTSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.4%) GO:0006402 (14.4%)" GO:0005829 (14.4%) "GO:0000175 (14.4%) GO:0003723 (14.4%) GO:0004654 (14.4%)" "RNA processing (14.4%) mRNA catabolic process (14.4%)" cytosol (14.4%) "3'-5'-RNA exonuclease activity (14.4%) RNA binding (14.4%) polyribonucleotide nucleotidyltransferase activity (14.4%)" "IPR001247 (8.3%) IPR012162 (8.3%) IPR015847 (8.3%)" "Exoribonuclease, phosphorolytic domain 1 (8.3%) Polyribonucleotide nucleotidyltransferase (8.3%) Exoribonuclease, phosphorolytic domain 2 (8.3%)" IVLLTHNIPYGSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) GO:0000428 (16.8%) "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0000287 (16.1%)" DNA-templated transcription (16.8%) DNA-directed RNA polymerase complex (16.8%) "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) magnesium ion binding (16.1%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" AQQVQSEIR Bacteria Bacteria "GO:0006412 (24.1%) GO:0006260 (0.4%) GO:0007059 (0.4%)" "GO:0022627 (24.1%) GO:0005694 (0.4%) GO:0005737 (0.4%)" "GO:0003735 (24.1%) GO:0070181 (24.1%) GO:0003677 (0.4%)" "translation (24.1%) DNA replication (0.4%) chromosome segregation (0.4%)" "cytosolic small ribosomal subunit (24.1%) chromosome (0.4%) cytoplasm (0.4%)" "structural constituent of ribosome (24.1%) small ribosomal subunit rRNA binding (24.1%) DNA binding (0.4%)" "IPR001648 (32.3%) IPR018275 (32.3%) IPR036870 (32.3%)" "Small ribosomal subunit protein bS18 (32.3%) Small ribosomal subunit protein bS18, conserved site (32.3%) Small ribosomal subunit protein bS18 superfamily (32.3%)" LTEEDLQQIEAAAKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (28.6%) GO:0003863 (4.8%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (28.6%) branched-chain 2-oxo acid dehydrogenase activity (4.8%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" ASDYEILTCR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.3%) GO:0006396 (14.2%) GO:0006401 (0.1%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "mRNA catabolic process (14.3%) RNA processing (14.2%) RNA catabolic process (0.1%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8%) IPR012162 (8%) IPR015847 (8%)" "Exoribonuclease, phosphorolytic domain 1 (8%) Polyribonucleotide nucleotidyltransferase (8%) Exoribonuclease, phosphorolytic domain 2 (8%)" LVPLCPFVAGYIHK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) "GO:0016740 (96.3%) GO:0016746 (3.7%)" "transferase activity (96.3%) acyltransferase activity (3.7%)" "IPR016181 (33.3%) IPR031165 (33.3%) IPR045057 (33.3%)" "Acyl-CoA N-acyltransferase (33.3%) Yjdj-type Gcn5-related N-acetyltransferase (33.3%) Gcn5-related N-acetyltransferase (33.3%)" SLDLDSIIAEVK Sarcopterygii Eukaryota Metazoa Chordata Craniata Sarcopterygii "GO:0031424 (15.6%) GO:0045109 (15.6%) GO:0002244 (0.8%)" "GO:0045095 (18.3%) GO:0005615 (14.9%) GO:0005737 (5.3%)" "GO:0030280 (15.6%) GO:0046982 (0.7%) GO:0030246 (0.7%)" "keratinization (15.6%) intermediate filament organization (15.6%) hematopoietic progenitor cell differentiation (0.8%)" "keratin filament (18.3%) extracellular space (14.9%) cytoplasm (5.3%)" "structural constituent of skin epidermis (15.6%) protein heterodimerization activity (0.7%) carbohydrate binding (0.7%)" "IPR039008 (25.5%) IPR003054 (24.8%) IPR032444 (23.8%)" "Intermediate filament, rod domain (25.5%) Keratin, type II (24.8%) Keratin type II head (23.8%)" IGIPEEWLR Pseudomonadati Bacteria Pseudomonadati "4.1.2.13 (85.7%) 4.1.2.- (14.3%)" "fructose-bisphosphate aldolase (85.7%) Aldehyde-lyases (14.3%)" "GO:0006096 (22.5%) GO:0030388 (22.5%) GO:0005975 (3.1%)" GO:0016020 (0.8%) "GO:0008270 (25.6%) GO:0004332 (22.5%) GO:0016832 (3.1%)" "glycolytic process (22.5%) fructose 1,6-bisphosphate metabolic process (22.5%) carbohydrate metabolic process (3.1%)" membrane (0.8%) "zinc ion binding (25.6%) fructose-bisphosphate aldolase activity (22.5%) aldehyde-lyase activity (3.1%)" "IPR000771 (25.6%) IPR013785 (25.6%) IPR050246 (25.6%)" "Fructose-bisphosphate aldolase, class-II (25.6%) Aldolase-type TIM barrel (25.6%) Class II Fructose-bisphosphate Aldolase (25.6%)" RGQESGRADDNEETIKK Bacteria Bacteria "2.7.4.3 (95.2%) 2.7.4.- (4.8%)" "adenylate kinase (95.2%) Phosphotransferases with a phosphate group as acceptor (4.8%)" "GO:0044209 (23.9%) GO:0006139 (1%)" GO:0005737 (23.9%) "GO:0005524 (25.4%) GO:0004017 (24.4%) GO:0019205 (1%)" "AMP salvage (23.9%) nucleobase-containing compound metabolic process (1%)" cytoplasm (23.9%) "ATP binding (25.4%) AMP kinase activity (24.4%) nucleobase-containing compound kinase activity (1%)" "IPR000850 (30%) IPR027417 (30%) IPR033690 (30%)" "Adenylate kinase/UMP-CMP kinase (30%) P-loop containing nucleoside triphosphate hydrolase (30%) Adenylate kinase, conserved site (30%)" IVPALTKEFGYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (16.7%) "GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "ribosome (16.7%) ribonucleoprotein complex (16.7%)" "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR002132 (20%) IPR020930 (20%) IPR022803 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5, bacteria (20%) Large ribosomal subunit protein uL5 domain superfamily (20%)" NLAPAGVTFVIVKNDAVGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (19.6%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%) GO:0008483 (0.4%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (19.6%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%) transaminase activity (0.4%)" "IPR000192 (20.2%) IPR022278 (20.2%) IPR015421 (19.8%)" "Aminotransferase class V domain (20.2%) Phosphoserine aminotransferase (20.2%) Pyridoxal phosphate-dependent transferase, major domain (19.8%)" TIDTVNPIVEGGTGFIPGPFGTGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (22.7%) GO:0046034 (2.3%)" "GO:0005524 (25%) GO:0046961 (25%) GO:0046933 (22.7%)" "proton motive force-driven plasma membrane ATP synthesis (22.7%) ATP metabolic process (2.3%)" "ATP binding (25%) proton-transporting ATPase activity, rotational mechanism (25%) proton-transporting ATP synthase activity, rotational mechanism (22.7%)" "IPR000194 (14.7%) IPR022878 (14.7%) IPR027417 (14.7%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14.7%) V-type ATP synthase catalytic alpha chain (14.7%) P-loop containing nucleoside triphosphate hydrolase (14.7%)" VSGTPNNDAYQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0017004 (25%) GO:0030313 (25%) "GO:0016209 (25%) GO:0016491 (25%)" cytochrome complex assembly (25%) cell envelope (25%) "antioxidant activity (25%) oxidoreductase activity (25%)" "IPR025380 (17.4%) IPR000866 (16.5%) IPR013766 (16.5%)" "Domain of unknown function DUF4369 (17.4%) Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.5%) Thioredoxin domain (16.5%)" QLNVEEILYAATLTNDPAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" GEIRPLAQADAAELDALIVPGGFGAAK root 4.2.1.- (100%) Hydro-lyases (100%) "GO:0008299 (0.8%) GO:0045828 (0.8%)" GO:0005829 (0.8%) "GO:0016829 (77.2%) GO:0016740 (20.5%)" "isoprenoid biosynthetic process (0.8%) obsolete positive regulation of isoprenoid metabolic process (0.8%)" cytosol (0.8%) "lyase activity (77.2%) transferase activity (20.5%)" "IPR029062 (51%) IPR026041 (49%)" "Class I glutamine amidotransferase-like (51%) Glyoxalase ElbB (49%)" ITDLMFEGTDEDLRQTK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0006633 (13.7%) GO:0005829 (13.7%) GO:0004314 (72.6%) fatty acid biosynthetic process (13.7%) cytosol (13.7%) [acyl-carrier-protein] S-malonyltransferase activity (72.6%) "IPR001227 (14.3%) IPR004410 (14.3%) IPR014043 (14.3%)" "Acyl transferase domain superfamily (14.3%) Malonyl CoA-acyl carrier protein transacylase, FabD-type (14.3%) Acyl transferase domain (14.3%)" YYENGQWVTTGPLEIHKDLTYPNIGPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.5.1.43 (50%) 1.5.1.7 (50%)" "carboxynorspermidine synthase (50%) saccharopine dehydrogenase (NAD(+), L-lysine-forming) (50%)" "GO:0102143 (50%) GO:0000166 (25%) GO:0004754 (25%)" "carboxynorspermidine dehydrogenase activity (50%) nucleotide binding (25%) saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (25%)" "IPR005097 (33.3%) IPR032095 (33.3%) IPR036291 (33.3%)" "Saccharopine dehydrogenase, NADP binding domain (33.3%) Saccharopine dehydrogenase-like, C-terminal (33.3%) NAD(P)-binding domain superfamily (33.3%)" IVCQFDGTELSIGFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006271 (16.7%) "GO:0005737 (16.7%) GO:0009360 (16.7%)" "GO:0003677 (16.7%) GO:0003887 (16.7%) GO:0008408 (16.7%)" DNA strand elongation involved in DNA replication (16.7%) "cytoplasm (16.7%) DNA polymerase III complex (16.7%)" "DNA binding (16.7%) DNA-directed DNA polymerase activity (16.7%) 3'-5' exonuclease activity (16.7%)" "IPR001001 (20%) IPR022634 (20%) IPR022635 (20%)" "DNA polymerase III, beta sliding clamp (20%) DNA polymerase III, beta sliding clamp, N-terminal (20%) DNA polymerase III, beta sliding clamp, C-terminal (20%)" VAHEAIKVQCK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (8.3%) IPR003029 (8.3%) IPR004087 (8.3%)" "Exoribonuclease, phosphorolytic domain 1 (8.3%) S1 domain (8.3%) K Homology domain (8.3%)" AKKPDNWEIVGKPQSQEAYGCMLRK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006865 (33.2%) GO:0015813 (0.1%) GO:0070778 (0.1%)" "GO:0005576 (33.2%) GO:0030288 (33.2%) GO:0016020 (0.1%)" "GO:0016595 (0.1%) GO:0070335 (0.1%)" "amino acid transport (33.2%) L-glutamate transmembrane transport (0.1%) L-aspartate transmembrane transport (0.1%)" "extracellular region (33.2%) outer membrane-bounded periplasmic space (33.2%) membrane (0.1%)" "glutamate binding (0.1%) aspartate binding (0.1%)" "IPR051455 (50.2%) IPR001638 (49.8%)" "Bacterial solute-binding protein 3 (50.2%) Solute-binding protein family 3/N-terminal domain of MltF (49.8%)" VSPTNAVLTPDMISLTNSQGQNLNEFLSVQKVEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae ATVTKEWVIVDATDQTLGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (19.9%) GO:0017148 (19.9%)" "GO:0022625 (19.9%) GO:0005840 (0.5%)" "GO:0003729 (19.9%) GO:0003735 (19.9%)" "translation (19.9%) negative regulation of translation (19.9%)" "cytosolic large ribosomal subunit (19.9%) ribosome (0.5%)" "mRNA binding (19.9%) structural constituent of ribosome (19.9%)" "IPR005822 (25%) IPR005823 (25%) IPR023563 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13, conserved site (25%)" STLETVLTVLHAGGK root "5.6.2.2 (97.5%) 5.99.1.3 (2.5%)" "DNA topoisomerase (ATP-hydrolyzing) (97.5%) Transferred entry: 5.6.2.2 (2.5%)" "GO:0006265 (13.2%) GO:0006261 (10.6%) GO:0016539 (0.3%)" "GO:0005694 (11.9%) GO:0005737 (10.6%)" "GO:0003677 (13.5%) GO:0005524 (13.5%) GO:0046872 (13%)" "DNA topological change (13.2%) DNA-templated DNA replication (10.6%) intein-mediated protein splicing (0.3%)" "chromosome (11.9%) cytoplasm (10.6%)" "DNA binding (13.5%) ATP binding (13.5%) metal ion binding (13%)" "IPR003594 (7.4%) IPR036890 (7.4%) IPR000565 (7.3%)" "Histidine kinase/HSP90-like ATPase domain (7.4%) Histidine kinase/HSP90-like ATPase superfamily (7.4%) DNA topoisomerase, type IIA, subunit B (7.3%)" MALIVDPMLATGGSVIATIDLLKK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.4.2.9 (100%) uracil phosphoribosyltransferase (100%) "GO:0006223 (16.9%) GO:0044206 (16.7%) GO:0006206 (0%)" "GO:0005737 (15.2%) GO:0005829 (0.1%) GO:0016020 (0%)" "GO:0004845 (17.2%) GO:0005525 (17.2%) GO:0000287 (16.2%)" "uracil salvage (16.9%) UMP salvage (16.7%) pyrimidine nucleobase metabolic process (0%)" "cytoplasm (15.2%) cytosol (0.1%) membrane (0%)" "uracil phosphoribosyltransferase activity (17.2%) GTP binding (17.2%) magnesium ion binding (16.2%)" "IPR000836 (20.4%) IPR029057 (20.3%) IPR050054 (20.3%)" "Phosphoribosyltransferase domain (20.4%) Phosphoribosyltransferase-like (20.3%) Uracil phosphoribosyltransferase/Adenine phosphoribosyltransferase (20.3%)" SAMEPVWNGKEFVPR root 2.3.1.12 (100%) dihydrolipoyllysine-residue acetyltransferase (100%) "GO:0006086 (20.1%) GO:0006090 (0%) GO:0042867 (0%)" "GO:0005737 (20.1%) GO:0045254 (19.5%)" "GO:0031405 (20.1%) GO:0004742 (19.9%) GO:0016407 (0.2%)" "pyruvate decarboxylation to acetyl-CoA (20.1%) pyruvate metabolic process (0%) pyruvate catabolic process (0%)" "cytoplasm (20.1%) pyruvate dehydrogenase complex (19.5%)" "lipoic acid binding (20.1%) dihydrolipoyllysine-residue acetyltransferase activity (19.9%) acetyltransferase activity (0.2%)" "IPR001078 (11.5%) IPR050743 (11.5%) IPR023213 (11.4%)" "2-oxoacid dehydrogenase acyltransferase, catalytic domain (11.5%) 2-oxoacid dehydrogenase family, E2 component (11.5%) Chloramphenicol acetyltransferase-like domain superfamily (11.4%)" LIDQATAEIVETAKR root "GO:0006412 (19%) GO:0000028 (0.2%) GO:0002181 (0.2%)" "GO:0005840 (21%) GO:1990904 (18.8%) GO:0022627 (0.4%)" "GO:0003735 (19.2%) GO:0000049 (18.8%) GO:0001072 (0.2%)" "translation (19%) ribosomal small subunit assembly (0.2%) cytoplasmic translation (0.2%)" "ribosome (21%) ribonucleoprotein complex (18.8%) cytosolic small ribosomal subunit (0.4%)" "structural constituent of ribosome (19.2%) tRNA binding (18.8%) transcription antitermination factor activity, RNA binding (0.2%)" "IPR027486 (24.8%) IPR036838 (24.8%) IPR001848 (24.5%)" "Small ribosomal subunit protein uS10 domain (24.8%) Small ribosomal subunit protein uS10 domain superfamily (24.8%) Small ribosomal subunit protein uS10 (24.5%)" VVEEAINHLVDFR Bacteria Bacteria 3.1.-.- (100%) Acting on ester bonds (100%) "GO:0004521 (51.4%) GO:0016787 (48.6%)" "RNA endonuclease activity (51.4%) hydrolase activity (48.6%)" "IPR005229 (33.9%) IPR013527 (33.9%) IPR013551 (32.1%)" "Endoribonuclease YicC/YloC-like (33.9%) Endoribonuclease YicC-like, N-terminal (33.9%) Endoribonuclease YicC-like, C-terminal (32.1%)" RIVNEPTAASLAYGLDKTNKDMK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005737 (23.2%) GO:0070013 (2.7%)" "GO:0005524 (25%) GO:0140662 (25%) GO:0051082 (24.1%)" "cytoplasm (23.2%) intracellular organelle lumen (2.7%)" "ATP binding (25%) ATP-dependent protein folding chaperone (25%) unfolded protein binding (24.1%)" "IPR013126 (17%) IPR018181 (17%) IPR043129 (17%)" "Heat shock protein 70 family (17%) Heat shock protein 70, conserved site (17%) ATPase, nucleotide binding domain (17%)" KLLEQEMVNFLFEGK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria GO:0034599 (33.2%) GO:0005829 (33.2%) "GO:0005506 (33.2%) GO:0016787 (0.3%)" cellular response to oxidative stress (33.2%) cytosol (33.2%) "iron ion binding (33.2%) hydrolase activity (0.3%)" "IPR007457 (50%) IPR036766 (50%)" "Fe(II) trafficking protein YggX (50%) Fe(II) trafficking protein YggX superfamily (50%)" GLAEDASDEEKKAAKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" IVVTGVEMFRK Bacillota Bacteria Bacillati Bacillota 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (22.5%) "GO:0003746 (22.5%) GO:0005525 (22.5%) GO:0003924 (18.9%)" cytosol (22.5%) "translation elongation factor activity (22.5%) GTP binding (22.5%) GTPase activity (18.9%)" "IPR004161 (9.2%) IPR009000 (9.2%) IPR050055 (9.2%)" "Translation elongation factor EFTu-like, domain 2 (9.2%) Translation protein, beta-barrel domain superfamily (9.2%) Elongation factor Tu GTPase (9.2%)" LKVGALLTDIFAGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (25.3%) IPR022615 (25.3%) IPR056148 (25.3%)" "Na(+)-translocating NADH-quinone reductase subunit A (25.3%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (25.3%) NqrA, second alpha/beta domain (25.3%)" QIIIDCEIVCPISGTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.5%) GO:0015966 (12.5%)" "GO:0005737 (12.5%) GO:0070062 (12.5%) GO:1990742 (12.5%)" "GO:0004081 (12.5%) GO:0004820 (12.5%) GO:0005524 (12.5%)" "glycyl-tRNA aminoacylation (12.5%) diadenosine tetraphosphate biosynthetic process (12.5%)" "cytoplasm (12.5%) extracellular exosome (12.5%) microvesicle (12.5%)" "bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.5%) glycine-tRNA ligase activity (12.5%) ATP binding (12.5%)" "IPR002314 (11.1%) IPR002315 (11.1%) IPR004154 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Glycyl-tRNA synthetase (11.1%) Anticodon-binding (11.1%)" VRQEEHIELIASENYTSPR root 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.2%) GO:0035999 (14.7%) GO:0032259 (11.2%)" "GO:0005829 (15.2%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0004372 (15.2%) GO:0030170 (15.2%) GO:0008168 (11.2%)" "glycine biosynthetic process from serine (15.2%) tetrahydrofolate interconversion (14.7%) methylation (11.2%)" "cytosol (15.2%) cytoplasm (0.1%) membrane (0%)" "glycine hydroxymethyltransferase activity (15.2%) pyridoxal phosphate binding (15.2%) methyltransferase activity (11.2%)" "IPR015421 (14.5%) IPR015424 (14.5%) IPR039429 (14.5%)" "Pyridoxal phosphate-dependent transferase, major domain (14.5%) Pyridoxal phosphate-dependent transferase (14.5%) Serine hydroxymethyltransferase-like domain (14.5%)" ALTESDGDIEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" QKEETVSDAAMMVDPAGKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.21.- (100%) Serine endopeptidases (100%) GO:0006508 (32.8%) GO:0005737 (32.8%) "GO:0008236 (32.8%) GO:0003743 (1.7%)" proteolysis (32.8%) cytoplasm (32.8%) "serine-type peptidase activity (32.8%) translation initiation factor activity (1.7%)" "IPR005151 (12.5%) IPR011659 (12.5%) IPR012393 (12.5%)" "Tail specific protease (12.5%) WD40-like beta-propeller (12.5%) Tricorn protease (12.5%)" TQLHIAETEK Bacteria Bacteria 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (19.9%) GO:0006096 (19.9%) GO:0043937 (0.3%)" "GO:0005829 (19.5%) GO:0005737 (0.4%)" "GO:0004619 (19.9%) GO:0030145 (19.9%) GO:0016853 (0.1%)" "glucose catabolic process (19.9%) glycolytic process (19.9%) regulation of sporulation (0.3%)" "cytosol (19.5%) cytoplasm (0.4%)" "phosphoglycerate mutase activity (19.9%) manganese ion binding (19.9%) isomerase activity (0.1%)" "IPR005995 (20.1%) IPR006124 (20.1%) IPR017850 (20.1%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.1%) Metalloenzyme (20.1%) Alkaline-phosphatase-like, core domain superfamily (20.1%)" RGIDKAVTAAVEELK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (18.5%) GO:0006457 (0.1%) GO:0009314 (0.1%)" "GO:0005737 (14.8%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0140662 (18.5%) GO:0005524 (18.4%) GO:0016853 (17.6%)" "protein refolding (18.5%) protein folding (0.1%) response to radiation (0.1%)" "cytoplasm (14.8%) cytosol (0.1%) membrane (0.1%)" "ATP-dependent protein folding chaperone (18.5%) ATP binding (18.4%) isomerase activity (17.6%)" "IPR001844 (17.9%) IPR027413 (17.8%) IPR002423 (17.7%)" "Chaperonin Cpn60/GroEL (17.9%) GroEL-like equatorial domain superfamily (17.8%) Chaperonin Cpn60/GroEL/TCP-1 family (17.7%)" KYHAHDEKNECNVGDTVHIMETRPLSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022627 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000266 (25%) IPR012340 (25%) IPR019979 (25%)" "Small ribosomal subunit protein uS17 (25%) Nucleic acid-binding, OB-fold (25%) Small ribosomal subunit protein uS17, conserved site (25%)" TKETIEIAAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" MGAEFLTDDLIDELAQEAVDKTSILFQAIKPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006508 (33.3%) GO:0005829 (33.3%) GO:0008237 (33.3%) proteolysis (33.3%) cytosol (33.3%) metallopeptidase activity (33.3%) "IPR002510 (13.3%) IPR025502 (13.3%) IPR035068 (13.3%)" "Metalloprotease TldD/E, N-terminal domain (13.3%) TldD (13.3%) Metalloprotease TldD/PmbA, N-terminal (13.3%)" VVVGLLLGEVIR root "5.2.1.8 (99.9%) 3.4.21.92 (0.1%)" "peptidylprolyl isomerase (99.9%) endopeptidase Clp (0.1%)" "GO:0015031 (12.6%) GO:0051301 (12.4%) GO:0043335 (12.1%)" "GO:0005737 (12.4%) GO:0005759 (0%) GO:0005829 (0%)" "GO:0003755 (12.6%) GO:0043022 (12.1%) GO:0044183 (12.1%)" "protein transport (12.6%) cell division (12.4%) protein unfolding (12.1%)" "cytoplasm (12.4%) mitochondrial matrix (0%) cytosol (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.6%) ribosome binding (12.1%) protein folding chaperone (12.1%)" "IPR008880 (12.6%) IPR027304 (12.6%) IPR037041 (12.6%)" "Trigger factor, C-terminal (12.6%) Trigger factor/SurA domain superfamily (12.6%) Trigger factor, C-terminal domain superfamily (12.6%)" AGVAAIFGPGTPVAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (19.9%) GO:0005737 (19.9%) "GO:0004494 (19.9%) GO:0031419 (19.9%) GO:0046872 (19.9%)" propionate metabolic process, methylmalonyl pathway (19.9%) cytoplasm (19.9%) "methylmalonyl-CoA mutase activity (19.9%) cobalamin binding (19.9%) metal ion binding (19.9%)" "IPR006158 (16.8%) IPR006159 (16.8%) IPR036724 (16.8%)" "Cobalamin (vitamin B12)-binding domain (16.8%) Methylmalonyl-CoA mutase, C-terminal (16.8%) Cobalamin-binding domain superfamily (16.8%)" DAPMFVMGVNNDTYTPDMNIISNASCTTNCLAPLAK AVDNAAGVRQEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0051301 (11.8%) GO:0042834 (88.2%) cell division (11.8%) peptidoglycan binding (88.2%) "IPR007730 (33.3%) IPR036680 (33.3%) IPR052521 (33.3%)" "Sporulation-like domain (33.3%) Sporulation-like domain superfamily (33.3%) Bacterial cell division SPOR domain-containing protein (33.3%)" EADGSWYYTFEYAFDKEMAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.5.1.9 (100%) riboflavin synthase (100%) GO:0009231 (50%) GO:0004746 (50%) riboflavin biosynthetic process (50%) riboflavin synthase activity (50%) "IPR001783 (25%) IPR017938 (25%) IPR023366 (25%)" "Lumazine-binding protein (25%) Riboflavin synthase-like beta-barrel (25%) ATP synthase subunit alpha, N-terminal domain-like superfamily (25%)" WEGFQDFLKNEVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.1 (60%) 1.2.1.51 (20%) 1.2.7.- (20%)" "pyruvate synthase (60%) pyruvate dehydrogenase (NADP(+)) (20%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (11.3%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (11.3%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" SGGGFSSGSAGIINYQR Primates Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Euarchontoglires Primates "GO:0031424 (7.4%) GO:0045109 (7.4%) GO:0051290 (5.3%)" "GO:0045095 (11.6%) GO:0005829 (7.4%) GO:0005886 (6.3%)" "GO:0030280 (7.4%) GO:0046982 (5.3%) GO:0030246 (4.8%)" "keratinization (7.4%) intermediate filament organization (7.4%) protein heterotetramerization (5.3%)" "keratin filament (11.6%) cytosol (7.4%) plasma membrane (6.3%)" "structural constituent of skin epidermis (7.4%) protein heterodimerization activity (5.3%) carbohydrate binding (4.8%)" "IPR003054 (20.4%) IPR032449 (20.4%) IPR039008 (20.4%)" "Keratin, type II (20.4%) Keratin type II cytoskeletal 1, tail (20.4%) Intermediate filament, rod domain (20.4%)" GTNYIVNAPEMYLIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" RLFVVDTFCGANAATR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17%) GO:0005829 (17%) "GO:0004612 (17%) GO:0005524 (17%) GO:0046872 (17%)" gluconeogenesis (17%) cytosol (17%) "phosphoenolpyruvate carboxykinase (ATP) activity (17%) ATP binding (17%) metal ion binding (17%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" FMQGKPVAEQEIGK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "5.6.2.4 (93.1%) 3.6.4.12 (5.9%) 3.6.1.- (1%)" "DNA 3'-5' helicase (93.1%) DNA helicase (5.9%) In phosphorus-containing anhydrides (1%)" "GO:0006260 (8.4%) GO:0006281 (8.4%) GO:0006310 (8.4%)" "GO:0005737 (8.4%) GO:0030894 (8.4%) GO:0043590 (8.4%)" "GO:0043138 (8.4%) GO:0009378 (8.4%) GO:0016787 (8.2%)" "DNA replication (8.4%) DNA repair (8.4%) DNA recombination (8.4%)" "cytoplasm (8.4%) replisome (8.4%) bacterial nucleoid (8.4%)" "3'-5' DNA helicase activity (8.4%) four-way junction helicase activity (8.4%) hydrolase activity (8.2%)" "IPR018982 (7.3%) IPR032284 (7.3%) IPR036388 (7.3%)" "RQC domain (7.3%) ATP-dependent DNA helicase RecQ, zinc-binding domain (7.3%) Winged helix-like DNA-binding domain superfamily (7.3%)" SLNFIEQAVENDLKAGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (24.7%) GO:0005829 (24.7%) "GO:0004819 (24.7%) GO:0005524 (24.7%) GO:0016874 (1.2%)" glutaminyl-tRNA aminoacylation (24.7%) cytosol (24.7%) "glutamine-tRNA ligase activity (24.7%) ATP binding (24.7%) ligase activity (1.2%)" "IPR000924 (10.3%) IPR004514 (10.3%) IPR011035 (10.3%)" "Glutamyl/glutaminyl-tRNA synthetase (10.3%) Glutamine-tRNA synthetase (10.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (10.3%)" LIDSIIPEPLGGAHRNPEAMAASLK root 2.1.3.15 (100%) acetyl-CoA carboxytransferase (100%) "GO:0006633 (16.5%) GO:2001295 (16.4%) GO:0006260 (0%)" "GO:0009317 (16.5%) GO:0005737 (0%) GO:0005829 (0%)" "GO:0003989 (16.5%) GO:0005524 (16.5%) GO:0016743 (16.5%)" "fatty acid biosynthetic process (16.5%) malonyl-CoA biosynthetic process (16.4%) DNA replication (0%)" "acetyl-CoA carboxylase complex (16.5%) cytoplasm (0%) cytosol (0%)" "acetyl-CoA carboxylase activity (16.5%) ATP binding (16.5%) carboxyl- or carbamoyltransferase activity (16.5%)" "IPR001095 (33.1%) IPR011763 (33.1%) IPR029045 (33.1%)" "Acetyl-CoA carboxylase, alpha subunit (33.1%) Acetyl-coenzyme A carboxyltransferase, C-terminal (33.1%) ClpP/crotonase-like domain superfamily (33.1%)" GDYSMSFQENIVHASDSPETAEVELKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.4.6 (100%) nucleoside-diphosphate kinase (100%) "GO:0006183 (16.8%) GO:0006228 (16.8%) GO:0006241 (16.8%)" "GO:0004550 (16.8%) GO:0005524 (16.8%) GO:0046872 (15.8%)" "GTP biosynthetic process (16.8%) UTP biosynthetic process (16.8%) CTP biosynthetic process (16.8%)" "nucleoside diphosphate kinase activity (16.8%) ATP binding (16.8%) metal ion binding (15.8%)" "IPR001564 (25%) IPR023005 (25%) IPR034907 (25%)" "Nucleoside diphosphate kinase (25%) Nucleoside diphosphate kinase, active site (25%) Nucleoside diphosphate kinase-like domain (25%)" KTELETLTGYVIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.169 (100%) 2-dehydropantoate 2-reductase (100%) GO:0015940 (33.3%) GO:0005737 (33.3%) GO:0008677 (33.3%) pantothenate biosynthetic process (33.3%) cytoplasm (33.3%) 2-dehydropantoate 2-reductase activity (33.3%) "IPR003710 (14.3%) IPR008927 (14.3%) IPR013328 (14.3%)" "Ketopantoate reductase ApbA/PanE (14.3%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (14.3%) 6-phosphogluconate dehydrogenase, domain 2 (14.3%)" LYNIVPYGIDATGHIDYADLEK Bacteria Bacteria 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (16.2%) GO:0035999 (15.9%) GO:0032259 (8%)" "GO:0005829 (16.2%) GO:0005737 (0.2%) GO:0016020 (0.2%)" "GO:0004372 (16.2%) GO:0030170 (16.2%) GO:0008168 (8%)" "glycine biosynthetic process from serine (16.2%) tetrahydrofolate interconversion (15.9%) methylation (8%)" "cytosol (16.2%) cytoplasm (0.2%) membrane (0.2%)" "glycine hydroxymethyltransferase activity (16.2%) pyridoxal phosphate binding (16.2%) methyltransferase activity (8%)" "IPR015421 (14.5%) IPR015424 (14.5%) IPR039429 (14.5%)" "Pyridoxal phosphate-dependent transferase, major domain (14.5%) Pyridoxal phosphate-dependent transferase (14.5%) Serine hydroxymethyltransferase-like domain (14.5%)" TVYPNDVVAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (62.1%) "GO:0016853 (34.5%) GO:0003755 (3.4%)" plasma membrane (62.1%) "isomerase activity (34.5%) peptidyl-prolyl cis-trans isomerase activity (3.4%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" ATIEQVLAFNDKRR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (25%) GO:0005737 (25%) "GO:0004828 (25%) GO:0005524 (25%)" seryl-tRNA aminoacylation (25%) cytoplasm (25%) "serine-tRNA ligase activity (25%) ATP binding (25%)" "IPR002314 (14.1%) IPR002317 (14.1%) IPR006195 (14.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (14.1%) Serine-tRNA ligase, type1 (14.1%) Aminoacyl-tRNA synthetase, class II (14.1%)" MTGDNPDAPR root "GO:0005886 (99%) GO:0016020 (1%)" "plasma membrane (99%) membrane (1%)" "IPR003848 (33.9%) IPR051599 (33.9%) IPR014729 (32.3%)" "Domain of unknown function DUF218 (33.9%) Cell Envelope Integrity and Synthesis Associated Protein (33.9%) Rossmann-like alpha/beta/alpha sandwich fold (32.3%)" ILYLIEMAKEFEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006207 (16.7%) GO:0006520 (16.7%) GO:0044205 (16.7%)" GO:0005829 (16.7%) "GO:0004070 (16.7%) GO:0016597 (16.7%)" "'de novo' pyrimidine nucleobase biosynthetic process (16.7%) amino acid metabolic process (16.7%) 'de novo' UMP biosynthetic process (16.7%)" cytosol (16.7%) "aspartate carbamoyltransferase activity (16.7%) amino acid binding (16.7%)" "IPR002082 (20%) IPR006130 (20%) IPR006131 (20%)" "Aspartate carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%)" VLPMNTGAEAVETALK root 2.6.1.13 (100%) ornithine aminotransferase (100%) "GO:0055129 (13.7%) GO:0010121 (10.3%) GO:0019544 (10.3%)" "GO:0005737 (12.4%) GO:0005829 (1%) GO:0016020 (0%)" "GO:0030170 (16.9%) GO:0004587 (16.8%) GO:0042802 (16.8%)" "L-proline biosynthetic process (13.7%) L-arginine catabolic process to proline via ornithine (10.3%) L-arginine catabolic process to L-glutamate (10.3%)" "cytoplasm (12.4%) cytosol (1%) membrane (0%)" "pyridoxal phosphate binding (16.9%) ornithine aminotransferase activity (16.8%) identical protein binding (16.8%)" "IPR005814 (14.1%) IPR050103 (14.1%) IPR015421 (14.1%)" "Aminotransferase class-III (14.1%) Class-III Pyridoxal-phosphate-dependent Aminotransferase (14.1%) Pyridoxal phosphate-dependent transferase, major domain (14.1%)" EAEAYPGPSLIIAYAPCINHGLK Bacteria Bacteria "1.2.7.1 (94.6%) 1.2.7.- (5.1%) 1.2.1.51 (0.3%)" "pyruvate synthase (94.6%) With an iron-sulfur protein as acceptor (5.1%) pyruvate dehydrogenase (NADP(+)) (0.3%)" "GO:0006979 (16.2%) GO:0022900 (15.5%) GO:0044281 (5.6%)" "GO:0005506 (15.5%) GO:0051539 (15.5%) GO:0030976 (15.4%)" "response to oxidative stress (16.2%) electron transport chain (15.5%) small molecule metabolic process (5.6%)" "iron ion binding (15.5%) 4 iron, 4 sulfur cluster binding (15.5%) thiamine pyrophosphate binding (15.4%)" "IPR050722 (8%) IPR029061 (8%) IPR017896 (7.7%)" "Pyruvate:ferredoxin/flavodoxin oxidoreductase (8%) Thiamin diphosphate-binding fold (8%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (7.7%)" ASAPQAVVMGEQFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016020 (100%) membrane (100%) IPR025738 (100%) Aerotolerance-related protein BatD (100%) NGVEMYDVYTGFK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (24.6%) GO:0006166 (24.6%)" "GO:0008973 (24.6%) GO:0000287 (22.8%) GO:0004614 (3.5%)" "carbohydrate metabolic process (24.6%) purine ribonucleoside salvage (24.6%)" "phosphopentomutase activity (24.6%) magnesium ion binding (22.8%) phosphoglucomutase activity (3.5%)" "IPR005846 (13.3%) IPR016055 (13.3%) IPR036900 (13.3%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (13.3%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (13.3%) Alpha-D-phosphohexomutase, C-terminal domain superfamily (13.3%)" WLTPAYDAETQAEVKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.2.2 (61.5%) 5.4.2.- (34.6%) 5.4.2.8 (3.8%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (61.5%) Phosphotransferases (phosphomutases) (34.6%) phosphomannomutase (3.8%)" "GO:0005975 (24.1%) GO:0006166 (24.1%)" "GO:0008973 (24.1%) GO:0000287 (23.9%) GO:0004614 (3.5%)" "carbohydrate metabolic process (24.1%) purine ribonucleoside salvage (24.1%)" "phosphopentomutase activity (24.1%) magnesium ion binding (23.9%) phosphoglucomutase activity (3.5%)" "IPR016055 (12.7%) IPR005844 (12.6%) IPR005845 (12.6%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (12.7%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.6%)" LYSNSHLDELLVEFENNAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (31.8%) GO:0051536 (1.5%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (31.8%) iron-sulfur cluster binding (1.5%)" "IPR003741 (14.7%) IPR004452 (14.7%) IPR017896 (14.7%)" "LUD domain (14.7%) L-lactate oxidation iron-sulfur protein LutB/LldF (14.7%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14.7%)" IGTYNPNTNPATVDLNFER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" GEGLVLMDNPAEKEYPMPLFLAGKDPVYVGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11%) GO:0009089 (11%) GO:0009097 (11%)" "GO:0004073 (11%) GO:0046983 (11%) GO:0050661 (11%)" "threonine biosynthetic process (11%) lysine biosynthetic process via diaminopimelate (11%) isoleucine biosynthetic process (11%)" "aspartate-semialdehyde dehydrogenase activity (11%) protein dimerization activity (11%) NADP binding (11%)" "IPR000319 (16.7%) IPR000534 (16.7%) IPR005986 (16.7%)" "Aspartate-semialdehyde dehydrogenase, conserved site (16.7%) Semialdehyde dehydrogenase, NAD-binding (16.7%) Aspartate-semialdehyde dehydrogenase, beta-type (16.7%)" YYGSDKPDLR root "6.1.1.12 (78%) 6.1.1.23 (21.7%) 6.1.1.- (0.3%)" "aspartate--tRNA ligase (78%) aspartate--tRNA(Asn) ligase (21.7%) Ligases forming aminoacyl-tRNA and related compounds (0.3%)" "GO:0006422 (19%) GO:0006430 (0.2%) GO:0006418 (0.1%)" "GO:0005737 (18.4%) GO:0005739 (0.6%)" "GO:0005524 (19.1%) GO:0004815 (19%) GO:0003676 (18.5%)" "aspartyl-tRNA aminoacylation (19%) lysyl-tRNA aminoacylation (0.2%) tRNA aminoacylation for protein translation (0.1%)" "cytoplasm (18.4%) mitochondrion (0.6%)" "ATP binding (19.1%) aspartate-tRNA ligase activity (19%) nucleic acid binding (18.5%)" "IPR004364 (9.3%) IPR045864 (9.2%) IPR004115 (9.2%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (9.3%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (9.2%) GAD-like domain superfamily (9.2%)" TANQDGFLKEDIDVIVATIAFGMGIDKPDVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.6.2.4 (100%) DNA 3'-5' helicase (100%) "GO:0006260 (8.3%) GO:0006281 (8.3%) GO:0006310 (8.3%)" "GO:0005737 (8.3%) GO:0030894 (8.3%) GO:0043590 (8.3%)" "GO:0003677 (8.3%) GO:0005524 (8.3%) GO:0009378 (8.3%)" "DNA replication (8.3%) DNA repair (8.3%) DNA recombination (8.3%)" "cytoplasm (8.3%) replisome (8.3%) bacterial nucleoid (8.3%)" "DNA binding (8.3%) ATP binding (8.3%) four-way junction helicase activity (8.3%)" "IPR001650 (7.1%) IPR002121 (7.1%) IPR004589 (7.1%)" "Helicase, C-terminal domain-like (7.1%) HRDC domain (7.1%) DNA helicase, ATP-dependent, RecQ type (7.1%)" VSGPVPLPTER Bacteria Bacteria GO:0006412 (20.1%) "GO:0005840 (20.1%) GO:1990904 (20.1%)" "GO:0003735 (20.1%) GO:0000049 (19.5%)" translation (20.1%) "ribosome (20.1%) ribonucleoprotein complex (20.1%)" "structural constituent of ribosome (20.1%) tRNA binding (19.5%)" "IPR001848 (25.2%) IPR027486 (25.2%) IPR036838 (25.2%)" "Small ribosomal subunit protein uS10 (25.2%) Small ribosomal subunit protein uS10 domain (25.2%) Small ribosomal subunit protein uS10 domain superfamily (25.2%)" RLEARPTADLCIDCK root "GO:0010468 (32.7%) GO:0006355 (0.1%) GO:0006302 (0%)" "GO:0005737 (33.2%) GO:0005829 (0%)" "GO:0008270 (33.4%) GO:0003677 (0.6%) GO:0097216 (0%)" "regulation of gene expression (32.7%) regulation of DNA-templated transcription (0.1%) double-strand break repair (0%)" "cytoplasm (33.2%) cytosol (0%)" "zinc ion binding (33.4%) DNA binding (0.6%) guanosine tetraphosphate binding (0%)" "IPR000962 (17.7%) IPR012784 (17.6%) IPR048489 (17.6%)" "Zinc finger, DksA/TraR C4-type (17.7%) RNA polymerase-binding transcription factor DksA (17.6%) DnaK suppressor protein DksA, N-terminal domain (17.6%)" NAAGAVSGTVSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.24.- (100%) Metalloendopeptidases (100%) GO:0051603 (25%) GO:0016020 (25%) "GO:0004222 (25%) GO:0046872 (25%)" proteolysis involved in protein catabolic process (25%) membrane (25%) "metalloendopeptidase activity (25%) metal ion binding (25%)" "IPR001915 (50%) IPR051156 (50%)" "Peptidase M48 (50%) Mitochondrial and Outer Membrane Metalloprotease (50%)" NLAHEYGYNITFAPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" MLAAGFDIKPTQSAICAVMLYDAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.29 (99%) 2.3.1.50 (1%)" "glycine C-acetyltransferase (99%) serine C-palmitoyltransferase (1%)" "GO:0030148 (13.6%) GO:0019518 (13.4%) GO:0006567 (0.9%)" "GO:0005829 (14.5%) GO:0016020 (13.6%)" "GO:0008890 (14.5%) GO:0030170 (14.5%) GO:0004758 (8.3%)" "sphingolipid biosynthetic process (13.6%) L-threonine catabolic process to glycine (13.4%) L-threonine catabolic process (0.9%)" "cytosol (14.5%) membrane (13.6%)" "glycine C-acetyltransferase activity (14.5%) pyridoxal phosphate binding (14.5%) serine C-palmitoyltransferase activity (8.3%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" INEKEMENAYLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (32.1%) IPR019734 (32.1%) IPR051685 (31.3%)" "Tetratricopeptide-like helical domain superfamily (32.1%) Tetratricopeptide repeat (32.1%) Ycf3/AcsC/BcsC/TPR Multifunctional (31.3%)" LAVFDQLITTADLLDDKYLLVQR Jilunia laotingensis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Jilunia Jilunia laotingensis 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.7%) GO:0005829 (16.7%) "GO:0003723 (16.7%) GO:0004831 (16.7%) GO:0005524 (16.7%)" tyrosyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "RNA binding (16.7%) tyrosine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR001412 (12.5%) IPR002305 (12.5%) IPR002307 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Aminoacyl-tRNA synthetase, class Ic (12.5%) Tyrosine-tRNA ligase (12.5%)" AEISEEDYMRAEYVIEEIQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" ATALSSETNPTAAVPSTLTIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola TGFYMSLIGTPDEQR root 4.4.1.21 (100%) S-ribosylhomocysteine lyase (100%) "GO:0009372 (32.9%) GO:0019284 (0.1%) GO:2000145 (0%)" GO:0005829 (0.1%) "GO:0005506 (32.9%) GO:0043768 (32.9%) GO:0016787 (0.5%)" "quorum sensing (32.9%) L-methionine salvage from S-adenosylmethionine (0.1%) regulation of cell motility (0%)" cytosol (0.1%) "iron ion binding (32.9%) S-ribosylhomocysteine lyase activity (32.9%) hydrolase activity (0.5%)" "IPR003815 (33.2%) IPR011249 (33.2%) IPR037005 (33.2%)" "S-ribosylhomocysteinase (LuxS) (33.2%) Metalloenzyme, LuxS/M16 peptidase-like (33.2%) S-ribosylhomocysteinase (LuxS) superfamily (33.2%)" DISFEAPNAPHVFQK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0015031 (20.3%) GO:0051262 (20.3%) GO:0006457 (18.7%)" "GO:0005737 (19.1%) GO:0005829 (0.1%)" "GO:0051082 (20.3%) GO:0015038 (0.1%) GO:0070678 (0.1%)" "protein transport (20.3%) protein tetramerization (20.3%) protein folding (18.7%)" "cytoplasm (19.1%) cytosol (0.1%)" "unfolded protein binding (20.3%) glutathione disulfide oxidoreductase activity (0.1%) preprotein binding (0.1%)" "IPR003708 (49.1%) IPR035958 (49.1%) IPR002109 (0.3%)" "Bacterial protein export chaperone SecB (49.1%) SecB-like superfamily (49.1%) Glutaredoxin (0.3%)" IDSGAQTIVGTNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20.2%) GO:0005737 (20.2%) "GO:0004494 (20.2%) GO:0031419 (20.2%) GO:0046872 (19.3%)" propionate metabolic process, methylmalonyl pathway (20.2%) cytoplasm (20.2%) "methylmalonyl-CoA mutase activity (20.2%) cobalamin binding (20.2%) metal ion binding (19.3%)" "IPR006098 (17.1%) IPR006099 (17.1%) IPR016176 (17.1%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (17.1%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (17.1%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (17.1%)" DIGIMDGDLLAVHK root "3.4.21.88 (99.8%) 2.7.1.107 (0.1%) 3.4.21.- (0.1%)" "repressor LexA (99.8%) diacylglycerol kinase (ATP) (0.1%) Serine endopeptidases (0.1%)" "GO:0006281 (14.3%) GO:0009432 (14.2%) GO:0006260 (14.2%)" "GO:0005886 (0%) GO:0032993 (0%) GO:0005829 (0%)" "GO:0004252 (14.3%) GO:0003677 (14.2%) GO:0016787 (0.1%)" "DNA repair (14.3%) SOS response (14.2%) DNA replication (14.2%)" "plasma membrane (0%) protein-DNA complex (0%) cytosol (0%)" "serine-type endopeptidase activity (14.3%) DNA binding (14.2%) hydrolase activity (0.1%)" "IPR006197 (11.2%) IPR015927 (11.2%) IPR036286 (11.2%)" "Peptidase S24, LexA-like (11.2%) Peptidase S24/S26A/S26B/S26C (11.2%) LexA/Signal peptidase-like superfamily (11.2%)" ADVDDIDHLSNRR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20.1%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20.1%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007642 (7.9%) IPR007645 (7.9%) IPR015712 (7.9%)" "RNA polymerase Rpb2, domain 2 (7.9%) RNA polymerase Rpb2, domain 3 (7.9%) DNA-directed RNA polymerase, subunit 2 (7.9%)" QITENTDAVIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (24.4%) GO:0005737 (24.4%) "GO:0004828 (24.4%) GO:0005524 (24.4%) GO:0016874 (1.6%)" seryl-tRNA aminoacylation (24.4%) cytoplasm (24.4%) "serine-tRNA ligase activity (24.4%) ATP binding (24.4%) ligase activity (1.6%)" "IPR010978 (14.2%) IPR015866 (14.2%) IPR042103 (14.2%)" "Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm (14.2%) Serine-tRNA synthetase, type1, N-terminal (14.2%) Serine-tRNA synthetase, type1, N-terminal domain superfamily (14.2%)" IQVTGSEGELGIYPGHAPLLTAIKPGMIR root 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0015986 (0.1%) GO:0042777 (0%)" "GO:0005886 (23.8%) GO:0045259 (23.8%)" "GO:0046933 (23.8%) GO:0005524 (23.4%) GO:0016787 (5.1%)" "proton motive force-driven ATP synthesis (0.1%) proton motive force-driven plasma membrane ATP synthesis (0%)" "plasma membrane (23.8%) proton-transporting ATP synthase complex (23.8%)" "proton-transporting ATP synthase activity, rotational mechanism (23.8%) ATP binding (23.4%) hydrolase activity (5.1%)" "IPR001469 (20.2%) IPR020546 (20.2%) IPR036771 (20.2%)" "ATP synthase, F1 complex, delta/epsilon subunit (20.2%) ATP synthase, F1 complex, delta/epsilon subunit, N-terminal (20.2%) F0F1 ATP synthase delta/epsilon subunit, N-terminal (20.2%)" FENREYDYNEVIINQFIQHSGRPVFSMEAATR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.1.3.11 (94.4%) 2.1.3.9 (5.6%)" "N-succinylornithine carbamoyltransferase (94.4%) N-acetylornithine carbamoyltransferase (5.6%)" "GO:0019240 (24.6%) GO:0042450 (24.6%) GO:0006526 (1.5%)" "GO:0004585 (24.6%) GO:0016597 (24.6%)" "citrulline biosynthetic process (24.6%) L-arginine biosynthetic process via ornithine (24.6%) L-arginine biosynthetic process (1.5%)" "ornithine carbamoyltransferase activity (24.6%) amino acid binding (24.6%)" "IPR006130 (20%) IPR006131 (20%) IPR006132 (20%)" "Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20%)" TNGGEVFALTCPLITK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) "GO:0006437 (16.7%) GO:0043039 (0.2%)" GO:0005829 (16.7%) "GO:0003723 (16.7%) GO:0004831 (16.7%) GO:0005524 (16.7%)" "tyrosyl-tRNA aminoacylation (16.7%) tRNA aminoacylation (0.2%)" cytosol (16.7%) "RNA binding (16.7%) tyrosine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR001412 (12.7%) IPR002305 (12.7%) IPR002307 (12.7%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.7%) Aminoacyl-tRNA synthetase, class Ic (12.7%) Tyrosine-tRNA ligase (12.7%)" MYETHHGMSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR013750 (10.1%) IPR036554 (10.1%) IPR000705 (10%)" "GHMP kinase, C-terminal domain (10.1%) GHMP kinase, C-terminal domain superfamily (10.1%) Galactokinase (10%)" RLDIIVVGTGLAGASAAASLGEMGFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.5.1 (98.3%) 1.3.5.4 (1.7%)" "succinate dehydrogenase (98.3%) Transferred entry: 1.3.5.1 (1.7%)" GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (16.6%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (16.6%)" "IPR003953 (14.5%) IPR030664 (14.5%) IPR036188 (14.5%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.5%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (14.5%) FAD/NAD(P)-binding domain superfamily (14.5%)" DNEHLMDLLNSK Pseudomonadati Bacteria Pseudomonadati GO:0043200 (28.3%) GO:0005829 (28.3%) GO:0043565 (43.5%) response to amino acid (28.3%) cytosol (28.3%) sequence-specific DNA binding (43.5%) "IPR011008 (16.3%) IPR019887 (16.3%) IPR000485 (15.5%)" "Dimeric alpha-beta barrel (16.3%) Transcription regulator AsnC/Lrp, ligand binding domain (16.3%) AsnC-type HTH domain (15.5%)" CTATVSPNFNSNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR025347 (100%) Protein of unknown function DUF4251 (100%) RAAEGNNFGTVLIPEGLIEFVPAMKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" YLTVSEVKER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.14.- (100%) Dipeptidyl-peptidases and tripeptidyl-peptidases (100%) "GO:0006508 (24.4%) GO:0043171 (24.2%)" "GO:0008239 (25.7%) GO:0070009 (25.7%)" "proteolysis (24.4%) peptide catabolic process (24.2%)" "dipeptidyl-peptidase activity (25.7%) serine-type aminopeptidase activity (25.7%)" "IPR009003 (33.7%) IPR019500 (33.7%) IPR043504 (32.6%)" "Peptidase S1, PA clan (33.7%) Peptidase S46 (33.7%) Peptidase S1, PA clan, chymotrypsin-like fold (32.6%)" TKPGGFEGIGVDGLAWLKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.5 (100%) chorismate mutase (100%) GO:0046417 (48.5%) "GO:0004106 (48.5%) GO:0003849 (3%)" chorismate metabolic process (48.5%) "chorismate mutase activity (48.5%) 3-deoxy-7-phosphoheptulonate synthase activity (3%)" "IPR002701 (16.7%) IPR006218 (16.7%) IPR013785 (16.7%)" "Chorismate mutase II, prokaryotic-type (16.7%) DAHP synthetase I/KDSA (16.7%) Aldolase-type TIM barrel (16.7%)" ASSSGEVAYKGNPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR021255 (100%) Putative auto-transporter adhesin, head GIN domain (100%) NVNPSSEKPAGEWNEANIFVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) DVDKDFLMPVEDVFSITGR Bacteria Bacteria 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (17.6%) GO:0032045 (5.9%)" "GO:0003746 (19.1%) GO:0003924 (19.1%) GO:0005525 (19.1%)" "cytosol (17.6%) guanyl-nucleotide exchange factor complex (5.9%)" "translation elongation factor activity (19.1%) GTPase activity (19.1%) GTP binding (19.1%)" "IPR000795 (9%) IPR027417 (9%) IPR050055 (9%)" "Translational (tr)-type GTP-binding domain (9%) P-loop containing nucleoside triphosphate hydrolase (9%) Elongation factor Tu GTPase (9%)" DALLENVTVAADGKIDFADK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.8%) GO:0005829 (17.8%) "GO:0004612 (17.8%) GO:0005524 (17.8%) GO:0046872 (16.4%)" gluconeogenesis (17.8%) cytosol (17.8%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.8%) ATP binding (17.8%) metal ion binding (16.4%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" IMWVMYEHPETHFEELALR root "1.1.1.1 (53.6%) 1.2.1.10 (46.2%) 1.-.-.- (0.2%)" "alcohol dehydrogenase (53.6%) acetaldehyde dehydrogenase (acetylating) (46.2%) Oxidoreductases (0.2%)" "GO:0015976 (16.5%) GO:0006066 (16.5%) GO:0006113 (0%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0046872 (22.9%) GO:0004022 (20.9%) GO:0008774 (19.3%)" "carbon utilization (16.5%) alcohol metabolic process (16.5%) fermentation (0%)" "cytosol (0%) membrane (0%)" "metal ion binding (22.9%) alcohol dehydrogenase (NAD+) activity (20.9%) acetaldehyde dehydrogenase (acetylating) activity (19.3%)" "IPR001670 (11.1%) IPR039697 (11.1%) IPR018211 (10.3%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (11.1%) Iron-type alcohol dehydrogenase-like (11.1%) Alcohol dehydrogenase, iron-type, conserved site (10.3%)" TVEKDGYAAVQLGFQDKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" VSLSEDPEAEMPVAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.17.7.3 (100%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (100%) "GO:0016114 (17.5%) GO:0019288 (17.5%)" "GO:0046429 (17.5%) GO:0051539 (17.5%) GO:0005506 (16.3%)" "terpenoid biosynthetic process (17.5%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.5%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.5%) 4 iron, 4 sulfur cluster binding (17.5%) iron ion binding (16.3%)" "IPR004588 (25.9%) IPR011005 (25.9%) IPR017178 (24.1%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25.9%) Dihydropteroate synthase-like superfamily (25.9%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (24.1%)" EYKTDFLTSMFNFR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" FGAPLITNDGVTIAK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.1%) GO:0009408 (1%)" "GO:0005737 (15%) GO:0009986 (1%) GO:0042603 (1%)" "GO:0005524 (17.1%) GO:0140662 (17.1%) GO:0016853 (15.7%)" "protein refolding (17.1%) response to heat (1%)" "cytoplasm (15%) cell surface (1%) capsule (1%)" "ATP binding (17.1%) ATP-dependent protein folding chaperone (17.1%) isomerase activity (15.7%)" "IPR001844 (16.9%) IPR002423 (16.9%) IPR027413 (16.9%)" "Chaperonin Cpn60/GroEL (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%) GroEL-like equatorial domain superfamily (16.9%)" ILNEEGLGTSYMAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) "GO:0006633 (20.1%) GO:0044550 (20.1%)" "GO:0005737 (19.9%) GO:0016020 (0.2%)" "GO:0004315 (20.1%) GO:0033818 (19.7%)" "fatty acid biosynthetic process (20.1%) secondary metabolite biosynthetic process (20.1%)" "cytoplasm (19.9%) membrane (0.2%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (20.1%) beta-ketoacyl-acyl-carrier-protein synthase III activity (19.7%)" "IPR013751 (25.1%) IPR016039 (25.1%) IPR004655 (24.9%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (25.1%) Thiolase-like (25.1%) Beta-ketoacyl-[acyl-carrier-protein] synthase III (24.9%)" IGIMGCIVNGPGEMADADYGYVGAGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.17.7.3 (95.4%) 1.17.7.1 (4.6%)" "(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (95.4%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) (4.6%)" "GO:0016114 (17.3%) GO:0019288 (17.3%)" "GO:0046429 (17.3%) GO:0051539 (17.3%) GO:0005506 (16.7%)" "terpenoid biosynthetic process (17.3%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.3%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.3%) 4 iron, 4 sulfur cluster binding (17.3%) iron ion binding (16.7%)" "IPR004588 (25.4%) IPR045854 (25.4%) IPR011005 (24.6%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25.4%) Nitrite and sulphite reductase 4Fe-4S domain-like superfamily (25.4%) Dihydropteroate synthase-like superfamily (24.6%)" FAELLGDVVWDTK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (50%) GO:0016491 (25.8%) GO:0004601 (22.7%)" "iron ion binding (50%) oxidoreductase activity (25.8%) peroxidase activity (22.7%)" "IPR003251 (12.5%) IPR009040 (12.5%) IPR009078 (12.5%)" "Rubrerythrin, diiron-binding domain (12.5%) Ferritin-like diiron domain (12.5%) Ferritin-like superfamily (12.5%)" NLNEKTNEEIEGFLKK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001854 (25%) IPR018254 (25%) IPR036049 (25%)" "Large ribosomal subunit protein uL29 (25%) Large ribosomal subunit protein uL29, conserved site (25%) Large ribosomal subunit protein uL29 superfamily (25%)" FVGTGEKMDALDIFHPER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) "GO:0048500 (19%) GO:0005786 (1%)" "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (20%)" SRP-dependent cotranslational protein targeting to membrane (20%) "signal recognition particle (19%) signal recognition particle, endoplasmic reticulum targeting (1%)" "GTPase activity (20%) GTP binding (20%) 7S RNA binding (20%)" "IPR000897 (11.1%) IPR003593 (11.1%) IPR004125 (11.1%)" "Signal recognition particle, SRP54 subunit, GTPase domain (11.1%) AAA+ ATPase domain (11.1%) Signal recognition particle, SRP54 subunit, M-domain (11.1%)" STQINTESAPQSEVVEFRFPAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (76.9%) GO:0050112 (23.1%)" "nucleotide binding (76.9%) inositol 2-dehydrogenase (NAD+) activity (23.1%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" FSHLVEPGLNWKPTFIDEVKPVNVEAVR root 3.4.24.- (100%) Metalloendopeptidases (100%) "GO:0006508 (26.4%) GO:0009408 (0.4%) GO:0051301 (0.4%)" "GO:0016020 (44.8%) GO:0005829 (0.4%) GO:0005886 (0.4%)" GO:0008233 (26.4%) "proteolysis (26.4%) response to heat (0.4%) cell division (0.4%)" "membrane (44.8%) cytosol (0.4%) plasma membrane (0.4%)" peptidase activity (26.4%) "IPR001107 (17.3%) IPR036013 (17%) IPR010201 (16.6%)" "Band 7 domain (17.3%) Band 7/SPFH domain superfamily (17%) HflK (16.6%)" MHNGCLVLTDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) EAAEKDKVSNQQDDMTKNAQAEK root "GO:0006413 (0.2%) GO:0009409 (0.2%) GO:0061077 (0.2%)" "GO:0005829 (19.8%) GO:0005737 (0.2%) GO:0016020 (0.2%)" "GO:0003743 (21.7%) GO:0005525 (19.8%) GO:0003924 (19.5%)" "translational initiation (0.2%) response to cold (0.2%) obsolete chaperone-mediated protein folding (0.2%)" "cytosol (19.8%) cytoplasm (0.2%) membrane (0.2%)" "translation initiation factor activity (21.7%) GTP binding (19.8%) GTPase activity (19.5%)" "IPR006847 (7.6%) IPR013575 (7.3%) IPR015760 (7.3%)" "Translation initiation factor IF-2, N-terminal (7.6%) Initiation factor 2 associated domain, bacterial (7.3%) Translation initiation factor IF- 2 (7.3%)" ASLSAFDYLIR root "1.8.1.- (91.1%) 1.6.4.- (3%) 1.11.1.15 (2%)" "With NAD(+) or NADP(+) as acceptor (91.1%) With a disulfide as acceptor (3%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (2%)" "GO:0000302 (14.1%) GO:0045454 (0%) GO:0006979 (0%)" "GO:0005829 (14.1%) GO:0032991 (14%) GO:0009321 (0%)" "GO:0050660 (14.3%) GO:0016668 (14.3%) GO:0051287 (14.1%)" "response to reactive oxygen species (14.1%) cell redox homeostasis (0%) response to oxidative stress (0%)" "cytosol (14.1%) protein-containing complex (14%) alkyl hydroperoxide reductase complex (0%)" "flavin adenine dinucleotide binding (14.3%) oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (14.3%) NAD binding (14.1%)" "IPR036188 (11.6%) IPR023753 (11.6%) IPR050097 (11.6%)" "FAD/NAD(P)-binding domain superfamily (11.6%) FAD/NAD(P)-binding domain (11.6%) Ferredoxin--NADP reductase type 2 (11.6%)" NSFHEYDMFVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0015977 (23.3%) GO:0009317 (23.3%) "GO:0003989 (23.3%) GO:0004658 (23.3%) GO:0016740 (3.3%)" carbon fixation (23.3%) acetyl-CoA carboxylase complex (23.3%) "acetyl-CoA carboxylase activity (23.3%) propionyl-CoA carboxylase activity (23.3%) transferase activity (3.3%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" MYQVVGADGYASK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.2.1.- (93.3%) 3.2.1.49 (6.7%)" "Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (93.3%) alpha-N-acetylgalactosaminidase (6.7%)" GO:0005886 (3.9%) "GO:0000166 (47.1%) GO:0016798 (47.1%) GO:0016787 (2%)" plasma membrane (3.9%) "nucleotide binding (47.1%) hydrolase activity, acting on glycosyl bonds (47.1%) hydrolase activity (2%)" "IPR000683 (25%) IPR036291 (25%) IPR049303 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) NAD(P)-binding domain superfamily (25%) Glycosyl hydrolase 109, C-terminal domain (25%)" TVASLHEGSKEGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR025379 (100%) Protein of unknown function DUF4295 (100%) YGAVMIDNSSAFR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11%) GO:0009089 (11%) GO:0009097 (11%)" "GO:0051287 (11.2%) GO:0046983 (11.1%) GO:0004073 (11%)" "threonine biosynthetic process (11%) lysine biosynthetic process via diaminopimelate (11%) isoleucine biosynthetic process (11%)" "NAD binding (11.2%) protein dimerization activity (11.1%) aspartate-semialdehyde dehydrogenase activity (11%)" "IPR000534 (19.3%) IPR036291 (19.3%) IPR012280 (19.1%)" "Semialdehyde dehydrogenase, NAD-binding (19.3%) NAD(P)-binding domain superfamily (19.3%) Semialdehyde dehydrogenase, dimerisation domain (19.1%)" VVMTGPSKDNTPMFVK root "1.2.1.- (83.5%) 1.2.1.12 (16.5%)" "With NAD(+) or NADP(+) as acceptor (83.5%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (16.5%)" "GO:0072524 (19.4%) GO:0006006 (16.5%) GO:0006096 (1.3%)" "GO:0005737 (0.9%) GO:0005576 (0.2%) GO:0005829 (0.2%)" "GO:0051287 (21.8%) GO:0050661 (16.5%) GO:0004365 (13.5%)" "pyridine-containing compound metabolic process (19.4%) glucose metabolic process (16.5%) glycolytic process (1.3%)" "cytoplasm (0.9%) extracellular region (0.2%) cytosol (0.2%)" "NAD binding (21.8%) NADP binding (16.5%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (13.5%)" "IPR020828 (17.6%) IPR020831 (17.6%) IPR036291 (17.6%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17.6%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.6%) NAD(P)-binding domain superfamily (17.6%)" VMDRWAEGILQTLMEIAPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (25%) IPR018211 (25%) IPR044731 (25%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (25%) Alcohol dehydrogenase, iron-type, conserved site (25%) Butanol dehydrogenase-like (25%)" GVAITSHGESATSEGFVYEAINGASNER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (27.5%) GO:0003863 (5.8%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (27.5%) branched-chain 2-oxo acid dehydrogenase activity (5.8%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" SDINTNEEEGKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (25%) GO:0005829 (25%) "GO:0004819 (25%) GO:0005524 (25%)" glutaminyl-tRNA aminoacylation (25%) cytosol (25%) "glutamine-tRNA ligase activity (25%) ATP binding (25%)" "IPR000924 (11.1%) IPR004514 (11.1%) IPR011035 (11.1%)" "Glutamyl/glutaminyl-tRNA synthetase (11.1%) Glutamine-tRNA synthetase (11.1%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (11.1%)" AKGWITDEDIAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0005737 (47.1%) GO:0003746 (52.9%) cytoplasm (47.1%) translation elongation factor activity (52.9%) "IPR001816 (20.5%) IPR014039 (20.5%) IPR036402 (20.5%)" "Translation elongation factor EFTs/EF1B (20.5%) Translation elongation factor EFTs/EF1B, dimerisation (20.5%) Elongation factor Ts, dimerisation domain superfamily (20.5%)" NLSEMQFYVTQNHGTEPPFTGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.8.4.12 (100%) peptide-methionine (R)-S-oxide reductase (100%) "GO:0006979 (19.8%) GO:0030091 (19.8%) GO:0046686 (0.2%)" "GO:0005737 (19.8%) GO:0005829 (0.2%)" "GO:0033743 (19.8%) GO:0008270 (19%) GO:0016491 (0.5%)" "response to oxidative stress (19.8%) protein repair (19.8%) response to cadmium ion (0.2%)" "cytoplasm (19.8%) cytosol (0.2%)" "peptide-methionine (R)-S-oxide reductase activity (19.8%) zinc ion binding (19%) oxidoreductase activity (0.5%)" "IPR002579 (33.2%) IPR011057 (33.2%) IPR028427 (33.2%)" "Peptide methionine sulphoxide reductase MrsB domain (33.2%) Mss4-like superfamily (33.2%) Peptide methionine sulfoxide reductase MsrB (33.2%)" TPPVAIQLLEVAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (14.6%) IPR006519 (14.6%) IPR020783 (14.6%)" "Ribosomal protein uL11 (14.6%) Large ribosomal subunit protein uL11, bacteria (14.6%) Large ribosomal subunit protein uL11, C-terminal (14.6%)" EAHAVLGLHPENKEDVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" SLTEIKDVLASR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.7%) GO:0006352 (0%) GO:0006879 (0%)" "GO:0000428 (16.8%) GO:0005737 (16.4%) GO:0000345 (0%)" "GO:0003899 (16.7%) GO:0003677 (16.7%) GO:0046983 (16.6%)" "DNA-templated transcription (16.7%) DNA-templated transcription initiation (0%) intracellular iron ion homeostasis (0%)" "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.4%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA-directed RNA polymerase activity (16.7%) DNA binding (16.7%) protein dimerization activity (16.6%)" "IPR011260 (16.8%) IPR036603 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.8%) RNA polymerase, RBP11-like subunit (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" HYVLKPFCDTQR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.4.1.25 (100%) 4-alpha-glucanotransferase (100%) GO:0005975 (24.6%) GO:0005737 (24.6%) "GO:0004134 (24.6%) GO:2001070 (24.6%) GO:0016787 (1.8%)" carbohydrate metabolic process (24.6%) cytoplasm (24.6%) "4-alpha-glucanotransferase activity (24.6%) starch binding (24.6%) hydrolase activity (1.8%)" "IPR002044 (16.9%) IPR003385 (16.9%) IPR013783 (16.9%)" "Carbohydrate binding module family 20 (16.9%) Glycoside hydrolase, family 77 (16.9%) Immunoglobulin-like fold (16.9%)" AAGEPLPAVVPAGPDNPMGLYALYIGR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.-.-.- (100%) Transferases (100%) "GO:0008360 (14.3%) GO:0071555 (14.3%) GO:0018104 (14.3%)" "GO:0005576 (14.2%) GO:0042597 (14.2%) GO:0030288 (0%)" "GO:0071972 (14.3%) GO:0016757 (14.3%) GO:0016740 (0.1%)" "regulation of cell shape (14.3%) cell wall organization (14.3%) peptidoglycan-protein cross-linking (14.3%)" "extracellular region (14.2%) periplasmic space (14.2%) outer membrane-bounded periplasmic space (0%)" "peptidoglycan L,D-transpeptidase activity (14.3%) glycosyltransferase activity (14.3%) transferase activity (0.1%)" "IPR005490 (24.7%) IPR038063 (24.7%) IPR050979 (24.7%)" "L,D-transpeptidase catalytic domain (24.7%) L,D-transpeptidase catalytic domain-like (24.7%) Bacterial L,D-transpeptidase (24.7%)" AIGVQLYSVRDDLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR006311 (20%) IPR013022 (20%) IPR019546 (20%)" "Twin-arginine translocation pathway, signal sequence (20%) Xylose isomerase-like, TIM barrel domain (20%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (20%)" VADITLADFGR root "3.13.2.1 (92.7%) 3.3.1.1 (7.3%)" "adenosylhomocysteinase (92.7%) Transferred entry: 3.13.2.1 (7.3%)" "GO:0033353 (20.6%) GO:0006730 (20%) GO:0071269 (16.9%)" GO:0005829 (20.6%) "GO:0004013 (20.6%) GO:0004843 (0.2%) GO:0016787 (0.2%)" "S-adenosylmethionine cycle (20.6%) one-carbon metabolic process (20%) L-homocysteine biosynthetic process (16.9%)" cytosol (20.6%) "adenosylhomocysteinase activity (20.6%) cysteine-type deubiquitinase activity (0.2%) hydrolase activity (0.2%)" "IPR000043 (20.2%) IPR042172 (20.2%) IPR020082 (19.7%)" "Adenosylhomocysteinase-like (20.2%) Adenosylhomocysteinase-like superfamily (20.2%) S-adenosyl-L-homocysteine hydrolase, conserved site (19.7%)" NPEIVLHLDHGDTFETCK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (25%) GO:0030388 (25%)" "GO:0004332 (25%) GO:0008270 (25%)" "glycolytic process (25%) fructose 1,6-bisphosphate metabolic process (25%)" "fructose-bisphosphate aldolase activity (25%) zinc ion binding (25%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" IATMGSTGTSSTR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0051301 (18.7%) GO:0009410 (0%)" "GO:0009279 (20.3%) GO:0032153 (20.3%) GO:0005886 (20.2%)" "GO:0004222 (20.3%) GO:0016787 (0.2%) GO:0003899 (0%)" "cell division (18.7%) response to xenobiotic stimulus (0%)" "cell outer membrane (20.3%) cell division site (20.3%) plasma membrane (20.2%)" "metalloendopeptidase activity (20.3%) hydrolase activity (0.2%) DNA-directed RNA polymerase activity (0%)" "IPR016047 (20.5%) IPR011055 (20.5%) IPR050570 (20.3%)" "M23ase, beta-sheet core domain (20.5%) Duplicated hybrid motif (20.5%) Bacterial cell wall metabolism enzyme (20.3%)" GIDKAVTAAVEELK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (18.5%) GO:0006457 (0.1%) GO:0009314 (0.1%)" "GO:0005737 (14.8%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0140662 (18.5%) GO:0005524 (18.4%) GO:0016853 (17.6%)" "protein refolding (18.5%) protein folding (0.1%) response to radiation (0.1%)" "cytoplasm (14.8%) cytosol (0.1%) membrane (0.1%)" "ATP-dependent protein folding chaperone (18.5%) ATP binding (18.4%) isomerase activity (17.6%)" "IPR001844 (17.9%) IPR027413 (17.8%) IPR002423 (17.7%)" "Chaperonin Cpn60/GroEL (17.9%) GroEL-like equatorial domain superfamily (17.8%) Chaperonin Cpn60/GroEL/TCP-1 family (17.7%)" YYRPENAFER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32%) GO:0006044 (32%)" "GO:0004342 (32%) GO:0016853 (3.9%)" "carbohydrate metabolic process (32%) N-acetylglucosamine metabolic process (32%)" "glucosamine-6-phosphate deaminase activity (32%) isomerase activity (3.9%)" "IPR003737 (14.9%) IPR004547 (14.9%) IPR006148 (14.9%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.9%) Glucosamine-6-phosphate isomerase (14.9%) Glucosamine/galactosamine-6-phosphate isomerase (14.9%)" VNEIAYDVDDSPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006520 (17.3%) GO:0006207 (16%) GO:0044205 (16%)" GO:0005829 (16%) "GO:0016597 (17.3%) GO:0004070 (16%) GO:0016743 (1.3%)" "amino acid metabolic process (17.3%) 'de novo' pyrimidine nucleobase biosynthetic process (16%) 'de novo' UMP biosynthetic process (16%)" cytosol (16%) "amino acid binding (17.3%) aspartate carbamoyltransferase activity (16%) carboxyl- or carbamoyltransferase activity (1.3%)" "IPR006131 (20.9%) IPR036901 (20.9%) IPR002082 (19.4%)" "Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20.9%) Aspartate/ornithine carbamoyltransferase superfamily (20.9%) Aspartate carbamoyltransferase (19.4%)" MMGSIDLNSKPGTIDMSR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR005184 (33.3%) IPR038670 (33.3%) IPR053147 (33.3%)" "Domain of unknown function DUF306, Meta/HslJ (33.3%) HslJ-like superfamily (33.3%) Heat shock protein HslJ-like (33.3%)" TFHQVENAFLPFNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.4.1.- (50%) 2.4.1.319 (50%)" "Hexosyltransferases (50%) beta-1,4-mannooligosaccharide phosphorylase (50%)" "GO:0016757 (67.9%) GO:0016798 (28.6%) GO:0016787 (3.6%)" "glycosyltransferase activity (67.9%) hydrolase activity, acting on glycosyl bonds (28.6%) hydrolase activity (3.6%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" EIDLAEKEMPGLMALR Pseudomonadati Bacteria Pseudomonadati "3.13.2.1 (88.5%) 3.3.1.1 (11.5%)" "adenosylhomocysteinase (88.5%) Transferred entry: 3.13.2.1 (11.5%)" "GO:0033353 (20.4%) GO:0006730 (20.2%) GO:0071269 (18.2%)" GO:0005829 (20.4%) "GO:0004013 (20.4%) GO:0016787 (0.2%)" "S-adenosylmethionine cycle (20.4%) one-carbon metabolic process (20.2%) L-homocysteine biosynthetic process (18.2%)" cytosol (20.4%) "adenosylhomocysteinase activity (20.4%) hydrolase activity (0.2%)" "IPR000043 (20.1%) IPR042172 (20.1%) IPR015878 (19.9%)" "Adenosylhomocysteinase-like (20.1%) Adenosylhomocysteinase-like superfamily (20.1%) S-adenosyl-L-homocysteine hydrolase, NAD binding domain (19.9%)" SSVAQIGDTPMGGENPIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.17.7.3 (100%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (100%) "GO:0016114 (17.1%) GO:0019288 (17.1%)" "GO:0005506 (17.1%) GO:0046429 (17.1%) GO:0051539 (17.1%)" "terpenoid biosynthetic process (17.1%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.1%)" "iron ion binding (17.1%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.1%) 4 iron, 4 sulfur cluster binding (17.1%)" "IPR004588 (25%) IPR011005 (25%) IPR017178 (25%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25%) Dihydropteroate synthase-like superfamily (25%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (25%)" IADKFFEEDEINR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006207 (20.9%) GO:0006221 (20.9%)" GO:0009347 (20.9%) "GO:0046872 (20.9%) GO:0016740 (16.3%)" "'de novo' pyrimidine nucleobase biosynthetic process (20.9%) pyrimidine nucleotide biosynthetic process (20.9%)" aspartate carbamoyltransferase complex (20.9%) "metal ion binding (20.9%) transferase activity (16.3%)" "IPR002801 (20%) IPR020542 (20%) IPR020545 (20%)" "Aspartate transcarbamylase regulatory subunit (20%) Aspartate carbamoyltransferase regulatory subunit, C-terminal (20%) Aspartate carbamoyltransferase regulatory subunit, N-terminal (20%)" QAEDESDREVEGGR root "GO:0006413 (0.1%) GO:0009409 (0.1%) GO:0061077 (0.1%)" "GO:0005829 (20.1%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0003743 (21.8%) GO:0005525 (20.1%) GO:0003924 (19.4%)" "translational initiation (0.1%) response to cold (0.1%) obsolete chaperone-mediated protein folding (0.1%)" "cytosol (20.1%) cytoplasm (0.1%) membrane (0.1%)" "translation initiation factor activity (21.8%) GTP binding (20.1%) GTPase activity (19.4%)" "IPR006847 (7.7%) IPR015760 (7.5%) IPR027417 (7.5%)" "Translation initiation factor IF-2, N-terminal (7.7%) Translation initiation factor IF- 2 (7.5%) P-loop containing nucleoside triphosphate hydrolase (7.5%)" GTDYREIEIDGQYCK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0051539 (100%) 4 iron, 4 sulfur cluster binding (100%) "IPR007160 (33.3%) IPR017896 (33.3%) IPR050157 (33.3%)" "Domain of unknown function DUF362 (33.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (33.3%) Photosystem I iron-sulfur center (33.3%)" IITIGSVVGTMGNGGQANYAAAK root 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) "GO:0030497 (28.3%) GO:0006629 (1.5%) GO:0032787 (1.5%)" "GO:0005829 (0.3%) GO:0005886 (0.3%) GO:0009360 (0.3%)" "GO:0004316 (29.2%) GO:0051287 (27.7%) GO:0016491 (1.5%)" "fatty acid elongation (28.3%) lipid metabolic process (1.5%) monocarboxylic acid metabolic process (1.5%)" "cytosol (0.3%) plasma membrane (0.3%) DNA polymerase III complex (0.3%)" "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (29.2%) NAD binding (27.7%) oxidoreductase activity (1.5%)" "IPR002347 (16.2%) IPR020904 (16.2%) IPR036291 (16.2%)" "Short-chain dehydrogenase/reductase SDR (16.2%) Short-chain dehydrogenase/reductase, conserved site (16.2%) NAD(P)-binding domain superfamily (16.2%)" LVLLDSVVKHELASSAYNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20.1%) GO:0005829 (20.1%) "GO:0004335 (20.1%) GO:0005524 (20.1%) GO:0046872 (19.8%)" galactose metabolic process (20.1%) cytosol (20.1%) "galactokinase activity (20.1%) ATP binding (20.1%) metal ion binding (19.8%)" "IPR000705 (10.1%) IPR006203 (10.1%) IPR006204 (10.1%)" "Galactokinase (10.1%) GHMP kinase, ATP-binding, conserved site (10.1%) GHMP kinase N-terminal domain (10.1%)" TYDDLDYGMLEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" ALYQLQTMLSEIDKIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" VVGGAAGLIEEVAASK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 1.11.1.- (100%) Peroxidases (100%) "GO:0006979 (0.2%) GO:0009411 (0.2%) GO:0009636 (0.2%)" "GO:0042597 (92.1%) GO:0030313 (6%) GO:0030288 (0.2%)" "GO:0004601 (0.2%) GO:0020037 (0.2%) GO:0046872 (0.2%)" "response to oxidative stress (0.2%) response to UV (0.2%) response to toxic substance (0.2%)" "periplasmic space (92.1%) cell envelope (6%) outer membrane-bounded periplasmic space (0.2%)" "peroxidase activity (0.2%) heme binding (0.2%) metal ion binding (0.2%)" "IPR038352 (14.6%) IPR050894 (14.6%) IPR018976 (14.6%)" "Imelysin-like domain superfamily (14.6%) Iron uptake system component EfeM/EfeO (14.6%) Imelysin-like domain (14.6%)" EYKPIVANLLEAAGLNYGALPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.22 (100%) ribosylnicotinamide kinase (100%) "GO:0016301 (66.7%) GO:0050262 (33.3%)" "kinase activity (66.7%) ribosylnicotinamide kinase activity (33.3%)" "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" YIHDMVAWNALPVEEQEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.11.1.- (100%) Peroxidases (100%) GO:0005829 (33.3%) "GO:0004601 (33.3%) GO:0020037 (33.3%)" cytosol (33.3%) "peroxidase activity (33.3%) heme binding (33.3%)" "IPR006314 (25%) IPR011008 (25%) IPR048327 (25%)" "Dyp-type peroxidase (25%) Dimeric alpha-beta barrel (25%) Dyp-type peroxidase, N-terminal domain (25%)" ACGIYFADLNVLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis HVTESTSGQEDIQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.2.1.10 (55.6%) 3.2.1.93 (44.4%)" "oligo-1,6-glucosidase (55.6%) alpha,alpha-phosphotrehalase (44.4%)" GO:0009313 (40%) "GO:0004556 (40%) GO:0008788 (11.4%) GO:0004574 (8.6%)" oligosaccharide catabolic process (40%) "alpha-amylase activity (40%) alpha,alpha-phosphotrehalase activity (11.4%) oligo-1,6-glucosidase activity (8.6%)" "IPR006047 (25%) IPR013780 (25%) IPR017853 (25%)" "Glycosyl hydrolase family 13, catalytic domain (25%) Glycosyl hydrolase, all-beta (25%) Glycoside hydrolase superfamily (25%)" RLIEAAKPLSVTCHR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae GO:0005737 (50%) GO:0005507 (50%) cytoplasm (50%) copper ion binding (50%) "IPR005627 (50%) IPR036822 (50%)" "CutC-like (50%) CutC-like domain superfamily (50%)" AGIGEIHLPENEPGSSIMPGK Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) "GO:0006099 (20.2%) GO:0006106 (20.2%) GO:0006108 (20.2%)" GO:0005737 (19.3%) GO:0004333 (20.2%) "tricarboxylic acid cycle (20.2%) fumarate metabolic process (20.2%) malate metabolic process (20.2%)" cytoplasm (19.3%) fumarate hydratase activity (20.2%) "IPR000362 (14.3%) IPR005677 (14.3%) IPR008948 (14.3%)" "Fumarate lyase family (14.3%) Fumarate hydratase, class II (14.3%) L-Aspartase-like (14.3%)" YVQGENELLNLGYFVK Bacillota Bacteria Bacillati Bacillota 1.1.1.6 (100%) glycerol dehydrogenase (100%) "GO:0006091 (3.8%) GO:0019563 (3.8%)" GO:0005829 (30.8%) "GO:0046872 (30.8%) GO:0016614 (26.9%) GO:0008888 (3.8%)" "generation of precursor metabolites and energy (3.8%) glycerol catabolic process (3.8%)" cytosol (30.8%) "metal ion binding (30.8%) oxidoreductase activity, acting on CH-OH group of donors (26.9%) glycerol dehydrogenase (NAD+) activity (3.8%)" "IPR001670 (35.6%) IPR016205 (35.6%) IPR018211 (28.9%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (35.6%) Glycerol dehydrogenase (35.6%) Alcohol dehydrogenase, iron-type, conserved site (28.9%)" IQDYVAEEKAQVEELRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (9.9%) GO:0008564 (1.2%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (9.9%) protein-exporting ATPase activity (1.2%)" "IPR000185 (8.3%) IPR011115 (8.3%) IPR014018 (8.3%)" "Protein translocase subunit SecA (8.3%) SecA DEAD-like, N-terminal (8.3%) SecA motor DEAD (8.3%)" EGIGETAIVQIR root 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (14.7%) GO:0032259 (7.7%) GO:0006546 (1.8%)" "GO:0005829 (16.7%) GO:0005960 (16.6%) GO:0005739 (0.1%)" "GO:0004047 (17.3%) GO:0008483 (16.7%) GO:0008168 (7.7%)" "glycine decarboxylation via glycine cleavage system (14.7%) methylation (7.7%) glycine catabolic process (1.8%)" "cytosol (16.7%) glycine cleavage complex (16.6%) mitochondrion (0.1%)" "aminomethyltransferase activity (17.3%) transaminase activity (16.7%) methyltransferase activity (7.7%)" "IPR013977 (15%) IPR029043 (15%) IPR006222 (14.3%)" "Aminomethyltransferase, C-terminal domain (15%) Glycine cleavage T-protein/YgfZ, C-terminal (15%) GCVT, N-terminal domain (14.3%)" TVNAALSNTFGFGGHNACVIVKK root "2.3.1.179 (95.7%) 2.3.1.41 (4.3%)" "beta-ketoacyl-[acyl-carrier-protein] synthase II (95.7%) beta-ketoacyl-[acyl-carrier-protein] synthase I (4.3%)" GO:0006633 (32.8%) GO:0005829 (32.8%) "GO:0004315 (32.8%) GO:0016746 (1.6%)" fatty acid biosynthetic process (32.8%) cytosol (32.8%) "3-oxoacyl-[acyl-carrier-protein] synthase activity (32.8%) acyltransferase activity (1.6%)" "IPR016039 (15.1%) IPR000794 (14.4%) IPR014030 (14.4%)" "Thiolase-like (15.1%) Beta-ketoacyl synthase (14.4%) Beta-ketoacyl synthase-like, N-terminal (14.4%)" LGAQQCQLVDDSLVR root 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (12.4%) GO:0044210 (12.2%) GO:0006241 (0.3%)" "GO:0005829 (12.3%) GO:0097268 (7.9%) GO:0000015 (0.1%)" "GO:0003883 (12.6%) GO:0005524 (12.4%) GO:0042802 (12.4%)" "pyrimidine nucleobase biosynthetic process (12.4%) 'de novo' CTP biosynthetic process (12.2%) CTP biosynthetic process (0.3%)" "cytosol (12.3%) cytoophidium (7.9%) phosphopyruvate hydratase complex (0.1%)" "CTP synthase activity (12.6%) ATP binding (12.4%) identical protein binding (12.4%)" "IPR029062 (17.3%) IPR004468 (17%) IPR017926 (17%)" "Class I glutamine amidotransferase-like (17.3%) CTP synthase (17%) Glutamine amidotransferase (17%)" HLVKEDGSQAQVDEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24%) GO:0022627 (24%) "GO:0003729 (24%) GO:0003735 (24%) GO:0003676 (2%)" translation (24%) cytosolic small ribosomal subunit (24%) "mRNA binding (24%) structural constituent of ribosome (24%) nucleic acid binding (2%)" "IPR003029 (26.5%) IPR012340 (26.5%) IPR050437 (24.5%)" "S1 domain (26.5%) Nucleic acid-binding, OB-fold (26.5%) Small ribosomal subunit protein bS1-like (24.5%)" GQGPAWANSLFEDFCEFGLGMTLADKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.1 (60%) 1.2.1.51 (20%) 1.2.7.- (20%)" "pyruvate synthase (60%) pyruvate dehydrogenase (NADP(+)) (20%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (11%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (11%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" DKTVAISGFGNVAWGAATK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006537 (25.9%) GO:0005829 (24.1%) "GO:0004354 (25.9%) GO:0000166 (24.1%)" glutamate biosynthetic process (25.9%) cytosol (24.1%) "glutamate dehydrogenase (NADP+) activity (25.9%) nucleotide binding (24.1%)" "IPR006095 (12%) IPR006096 (12%) IPR006097 (12%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (12%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (12%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12%)" ALGTVSKEQVYAQEAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" TPAGYPSGSLGPTTAGR root "4.2.1.2 (99.9%) 4.2.1.81 (0.1%)" "fumarate hydratase (99.9%) D(-)-tartrate dehydratase (0.1%)" "GO:0006099 (19.8%) GO:0006091 (0.1%) GO:0006106 (0%)" GO:0005829 (0.1%) "GO:0004333 (20%) GO:0046872 (20%) GO:0051539 (20%)" "tricarboxylic acid cycle (19.8%) generation of precursor metabolites and energy (0.1%) fumarate metabolic process (0%)" cytosol (0.1%) "fumarate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR004647 (16.9%) IPR051208 (16.9%) IPR036660 (16.9%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.9%) Class-I Fumarase/Tartrate Dehydratase (16.9%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (16.9%)" TSTTVLVQASDLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR027848 (100%) Protein of unknown function DUF4494 (100%) NIIKFPQVATTR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR005184 (33.3%) IPR038670 (33.3%) IPR053147 (33.3%)" "Domain of unknown function DUF306, Meta/HslJ (33.3%) HslJ-like superfamily (33.3%) Heat shock protein HslJ-like (33.3%)" AENIDFTTAAESAIHGVVHIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.4.21.107 (66.7%) 3.4.21.- (33.3%)" "peptidase Do (66.7%) Serine endopeptidases (33.3%)" GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001478 (17%) IPR001940 (17%) IPR009003 (17%)" "PDZ domain (17%) Peptidase S1C (17%) Peptidase S1, PA clan (17%)" MKAEAQANAEADQKER SSVDKFYSQEVLQEMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.12 (100%) aspartate--tRNA ligase (100%) GO:0006422 (20%) GO:0005737 (20%) "GO:0003676 (20%) GO:0004815 (20%) GO:0005524 (20%)" aspartyl-tRNA aminoacylation (20%) cytoplasm (20%) "nucleic acid binding (20%) aspartate-tRNA ligase activity (20%) ATP binding (20%)" "IPR002312 (9.1%) IPR004115 (9.1%) IPR004364 (9.1%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.1%) GAD-like domain superfamily (9.1%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.1%)" MNILELSEQEIIRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.6%) "GO:0005829 (16.6%) GO:0005737 (0.2%)" "GO:0000049 (16.6%) GO:0004824 (16.6%) GO:0005524 (16.6%)" lysyl-tRNA aminoacylation (16.6%) "cytosol (16.6%) cytoplasm (0.2%)" "tRNA binding (16.6%) lysine-tRNA ligase activity (16.6%) ATP binding (16.6%)" "IPR004364 (11.3%) IPR004365 (11.3%) IPR006195 (11.3%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (11.3%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.3%) Aminoacyl-tRNA synthetase, class II (11.3%)" ELAEKEAAITR TATCVMMVSGGYPEAYQK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0006189 (20%) GO:0009113 (20%)" "GO:0004637 (20%) GO:0005524 (20%) GO:0046872 (20%)" "'de novo' IMP biosynthetic process (20%) purine nucleobase biosynthetic process (20%)" "phosphoribosylamine-glycine ligase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000115 (11.1%) IPR011054 (11.1%) IPR011761 (11.1%)" "Phosphoribosylglycinamide synthetase (11.1%) Rudiment single hybrid motif (11.1%) ATP-grasp fold (11.1%)" VGSGCTATVVDLGNR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.4 (100%) L-arabinose isomerase (100%) GO:0019569 (25%) GO:0005829 (25%) "GO:0008733 (25%) GO:0030145 (25%)" L-arabinose catabolic process to D-xylulose 5-phosphate (25%) cytosol (25%) "L-arabinose isomerase activity (25%) manganese ion binding (25%)" "IPR003762 (14.3%) IPR004216 (14.3%) IPR009015 (14.3%)" "L-arabinose isomerase (14.3%) L-fucose/L-arabinose isomerase, C-terminal (14.3%) L-fucose isomerase, N-terminal/central domain superfamily (14.3%)" YNGLEPVSATDFLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003439 (25%) IPR003593 (25%) IPR010230 (25%)" "ABC transporter-like, ATP-binding domain (25%) AAA+ ATPase domain (25%) FeS cluster assembly SUF system, ATPase SufC (25%)" SKNEIYIVTAHDSPNVMQEIGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006629 (50%) GO:0016746 (50%) lipid metabolic process (50%) acyltransferase activity (50%) "IPR016181 (50%) IPR052351 (50%)" "Acyl-CoA N-acyltransferase (50%) L-ornithine N(alpha)-acyltransferase (50%)" VSVFSNPASSLVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.7 (100%) DNA-directed DNA polymerase (100%) GO:0006271 (16.7%) "GO:0005737 (16.7%) GO:0009360 (16.7%)" "GO:0003677 (16.7%) GO:0003887 (16.7%) GO:0008408 (16.7%)" DNA strand elongation involved in DNA replication (16.7%) "cytoplasm (16.7%) DNA polymerase III complex (16.7%)" "DNA binding (16.7%) DNA-directed DNA polymerase activity (16.7%) 3'-5' exonuclease activity (16.7%)" "IPR001001 (20%) IPR022634 (20%) IPR022635 (20%)" "DNA polymerase III, beta sliding clamp (20%) DNA polymerase III, beta sliding clamp, N-terminal (20%) DNA polymerase III, beta sliding clamp, C-terminal (20%)" LSGDTLDGETAFR root "6.1.1.7 (99.6%) 6.-.-.- (0.4%)" "alanine--tRNA ligase (99.6%) Ligases (0.4%)" "GO:0006419 (12.5%) GO:0045892 (12.5%) GO:0006109 (0.1%)" "GO:0005829 (12.5%) GO:0016020 (0.1%)" "GO:0000049 (12.5%) GO:0002161 (12.5%) GO:0004813 (12.5%)" "alanyl-tRNA aminoacylation (12.5%) negative regulation of DNA-templated transcription (12.5%) regulation of carbohydrate metabolic process (0.1%)" "cytosol (12.5%) membrane (0.1%)" "tRNA binding (12.5%) aminoacyl-tRNA deacylase activity (12.5%) alanine-tRNA ligase activity (12.5%)" "IPR018162 (9.3%) IPR018164 (9.3%) IPR018165 (9.3%)" "Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily (9.3%) Alanyl-tRNA synthetase, class IIc, N-terminal (9.3%) Alanyl-tRNA synthetase, class IIc, core domain (9.3%)" AYINDLNTTTAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) YITGTCPHCGNEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004825 (16.7%) GO:0005524 (16.7%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) methionine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR001412 (8.3%) IPR002547 (8.3%) IPR004495 (8.3%)" "Aminoacyl-tRNA synthetase, class I, conserved site (8.3%) tRNA-binding domain (8.3%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.3%)" MEITHIEHLGIAVK Pseudomonadati Bacteria Pseudomonadati 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (47.3%) "GO:0004493 (47.3%) GO:0016829 (2.7%) GO:0051213 (2.7%)" L-methylmalonyl-CoA metabolic process (47.3%) "methylmalonyl-CoA epimerase activity (47.3%) lyase activity (2.7%) dioxygenase activity (2.7%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" LLKEVSLFDVYEGK Bacteria Bacteria 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) "GO:0006432 (16.4%) GO:0006412 (0.3%)" "GO:0009328 (16.4%) GO:0005737 (0.3%)" "GO:0000049 (16.6%) GO:0005524 (16.6%) GO:0000287 (16.4%)" "phenylalanyl-tRNA aminoacylation (16.4%) translation (0.3%)" "phenylalanine-tRNA ligase complex (16.4%) cytoplasm (0.3%)" "tRNA binding (16.6%) ATP binding (16.6%) magnesium ion binding (16.4%)" "IPR005121 (7.8%) IPR036690 (7.8%) IPR041616 (7.8%)" "Ferrodoxin-fold anticodon-binding domain (7.8%) Ferrodoxin-fold anticodon-binding domain superfamily (7.8%) Phenylalanyl tRNA synthetase beta chain, core domain (7.8%)" ATDKQSAEKEYTVEEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" VVDSIKHQAEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (18.2%) GO:0005737 (14.1%) "GO:0005524 (18.2%) GO:0140662 (18.2%) GO:0016853 (17.2%)" protein refolding (18.2%) cytoplasm (14.1%) "ATP binding (18.2%) ATP-dependent protein folding chaperone (18.2%) isomerase activity (17.2%)" "IPR001844 (17.3%) IPR002423 (17.3%) IPR027410 (17.3%)" "Chaperonin Cpn60/GroEL (17.3%) Chaperonin Cpn60/GroEL/TCP-1 family (17.3%) TCP-1-like chaperonin intermediate domain superfamily (17.3%)" AQEYVIENHDQYPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR021474 (100%) Protein of unknown function DUF3127 (100%) TYVVVNDYPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0016787 (50%) GO:0046872 (50%)" "hydrolase activity (50%) metal ion binding (50%)" IPR039461 (100%) Peptidase family M49 (100%) EVLKEADPELQIVAFK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0005737 (48.4%) GO:0003746 (51.6%) cytoplasm (48.4%) translation elongation factor activity (51.6%) "IPR001816 (20.5%) IPR014039 (20.5%) IPR036402 (20.5%)" "Translation elongation factor EFTs/EF1B (20.5%) Translation elongation factor EFTs/EF1B, dimerisation (20.5%) Elongation factor Ts, dimerisation domain superfamily (20.5%)" RKLQELGATR root "GO:0006412 (24.6%) GO:0002181 (0.1%)" "GO:0022625 (24.4%) GO:0005840 (1.3%) GO:1990904 (0.3%)" "GO:0003735 (24.7%) GO:0008097 (24.4%)" "translation (24.6%) cytoplasmic translation (0.1%)" "cytosolic large ribosomal subunit (24.4%) ribosome (1.3%) ribonucleoprotein complex (0.3%)" "structural constituent of ribosome (24.7%) 5S rRNA binding (24.4%)" "IPR005484 (34.7%) IPR004389 (34.3%) IPR057268 (30.5%)" "Large ribosomal subunit protein uL18, bacterial/plantae/animalia (34.7%) Large ribosomal subunit protein uL18, bacteria (34.3%) Large ribosomal subunit protein uL18 (30.5%)" LKQGIESATQK root "GO:0006974 (0.4%) GO:0042542 (0.4%)" GO:0005829 (48.9%) "GO:0000166 (48.9%) GO:0000049 (0.4%) GO:0005524 (0.4%)" "DNA damage response (0.4%) response to hydrogen peroxide (0.4%)" cytosol (48.9%) "nucleotide binding (48.9%) tRNA binding (0.4%) ATP binding (0.4%)" "IPR007551 (25.2%) IPR036183 (25.2%) IPR035571 (25%)" "Nucleotide-binding protein YajQ/Smlt4090-like (25.2%) YajQ-like superfamily (25.2%) UPF0234-like, C-terminal (25%)" MVQKGEVVGVIAAQSIGEPGTQLTLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) GO:0000428 (16.9%) "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (16%)" DNA-templated transcription (16.9%) DNA-directed RNA polymerase complex (16.9%) "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (16%)" "IPR007081 (9.4%) IPR045867 (9.4%) IPR000722 (9%)" "RNA polymerase Rpb1, domain 5 (9.4%) DNA-directed RNA polymerase, subunit beta-prime (9.4%) RNA polymerase, alpha subunit (9%)" ALDVDGIIAQLKDASILELNDLVK Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus GO:0006412 (24.6%) "GO:0022625 (23.7%) GO:0005840 (2.6%) GO:1990904 (0.9%)" "GO:0003735 (24.6%) GO:0003729 (23.7%)" translation (24.6%) "cytosolic large ribosomal subunit (23.7%) ribosome (2.6%) ribonucleoprotein complex (0.9%)" "structural constituent of ribosome (24.6%) mRNA binding (23.7%)" "IPR008932 (20.1%) IPR013823 (20.1%) IPR014719 (20.1%)" "Large ribosomal subunit protein bL12, oligomerization (20.1%) Large ribosomal subunit protein bL12, C-terminal (20.1%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20.1%)" ASCTTNCLAPIAK root "1.2.1.12 (59.6%) 1.2.1.- (40.2%) 2.6.99.- (0.2%)" "glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (59.6%) With NAD(+) or NADP(+) as acceptor (40.2%) Transferring other nitrogenous groups (0.2%)" "GO:0006096 (15.9%) GO:0006006 (9.2%) GO:0006915 (2.1%)" "GO:0005829 (15.2%) GO:0005856 (2.2%) GO:0005634 (2.2%)" "GO:0004365 (17.7%) GO:0051287 (15.5%) GO:0050661 (9.4%)" "glycolytic process (15.9%) glucose metabolic process (9.2%) apoptotic process (2.1%)" "cytosol (15.2%) cytoskeleton (2.2%) nucleus (2.2%)" "glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (17.7%) NAD binding (15.5%) NADP binding (9.4%)" "IPR020830 (19.1%) IPR020831 (19.1%) IPR020829 (19%)" "Glyceraldehyde 3-phosphate dehydrogenase, active site (19.1%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (19.1%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (19%)" NMAAELYKPFVIR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) GO:0000428 (16.9%) "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (15.9%)" DNA-templated transcription (16.9%) DNA-directed RNA polymerase complex (16.9%) "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (15.9%)" "IPR000722 (9.2%) IPR006592 (9.2%) IPR007080 (9.2%)" "RNA polymerase, alpha subunit (9.2%) RNA polymerase, N-terminal (9.2%) RNA polymerase Rpb1, domain 1 (9.2%)" EFQEHAAEEYNHAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006879 (20%) GO:0005829 (20%) "GO:0004322 (20%) GO:0008199 (20%) GO:0020037 (20%)" intracellular iron ion homeostasis (20%) cytosol (20%) "ferroxidase activity (20%) ferric iron binding (20%) heme binding (20%)" "IPR008331 (17.2%) IPR009078 (17.2%) IPR012347 (17.2%)" "Ferritin/DPS domain (17.2%) Ferritin-like superfamily (17.2%) Ferritin-like (17.2%)" LVHGGEEFASSVLINQDVINK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" MGLPVGERPPLGPWKDFLNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.9%) GO:0044210 (11.2%) GO:0006241 (0.7%)" "GO:0005829 (11.9%) GO:0097268 (9.8%)" "GO:0003883 (11.9%) GO:0005524 (11.9%) GO:0042802 (11.9%)" "pyrimidine nucleobase biosynthetic process (11.9%) 'de novo' CTP biosynthetic process (11.2%) CTP biosynthetic process (0.7%)" "cytosol (11.9%) cytoophidium (9.8%)" "CTP synthase activity (11.9%) ATP binding (11.9%) identical protein binding (11.9%)" "IPR004468 (17%) IPR017456 (17%) IPR027417 (17%)" "CTP synthase (17%) CTP synthase, N-terminal (17%) P-loop containing nucleoside triphosphate hydrolase (17%)" QKLPENNGGFTAINFGK Pseudomonadati Bacteria Pseudomonadati 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (50%) GO:0004332 (50%) glycolytic process (50%) fructose-bisphosphate aldolase activity (50%) "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" NQDFDHMPAAQWVVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) QIDVIALSTYRR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR006015 (33.3%) IPR006016 (33.3%) IPR014729 (33.3%)" "Universal stress protein A family (33.3%) UspA (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (33.3%)" LANELSDAAENK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (19.9%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0015935 (19.7%) GO:0005840 (0.6%) GO:0022627 (0.1%)" "GO:0003735 (19.8%) GO:0019843 (19.8%) GO:0000049 (19.6%)" "translation (19.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "small ribosomal subunit (19.7%) ribosome (0.6%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (19.8%) rRNA binding (19.8%) tRNA binding (19.6%)" "IPR023798 (20.1%) IPR036823 (20.1%) IPR000235 (20.1%)" "Small ribosomal subunit protein uS7 domain (20.1%) Small ribosomal subunit protein uS7 domain superfamily (20.1%) Small ribosomal subunit protein uS7 (20.1%)" ACGISGYMLGVNPFNQPGVEAYKK Bacteria Bacteria 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" TNQAITETSIKEFIEGLDVNEEIKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (24%) GO:0044208 (24%) GO:0006188 (4%)" "GO:0004018 (28%) GO:0070626 (20%)" "'de novo' IMP biosynthetic process (24%) 'de novo' AMP biosynthetic process (24%) IMP biosynthetic process (4%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (28%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (20%)" "IPR000362 (12.5%) IPR004769 (12.5%) IPR008948 (12.5%)" "Fumarate lyase family (12.5%) Adenylosuccinate lyase (12.5%) L-Aspartase-like (12.5%)" NSEHFSEVLLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.5.1.38 (100%) FMN reductase (NADPH) (100%) "GO:0016491 (83.3%) GO:0052873 (16.7%)" "oxidoreductase activity (83.3%) FMN reductase (NADPH) activity (16.7%)" "IPR000415 (33.3%) IPR016446 (33.3%) IPR029479 (33.3%)" "Nitroreductase-like (33.3%) Flavin oxidoreductase Frp family (33.3%) Nitroreductase (33.3%)" LKVGALLTHVFAGNVTK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (25%) IPR022615 (25%) IPR056147 (25%)" "Na(+)-translocating NADH-quinone reductase subunit A (25%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (25%) NqrA, N-terminal barrel-sandwich hybrid domain (25%)" SGKLDPVIGRDEEIRR root "GO:0034605 (17.9%) GO:0042026 (17.1%) GO:0006508 (2.9%)" "GO:0005737 (13.1%) GO:0005829 (4.8%) GO:0016020 (0%)" "GO:0005524 (17.9%) GO:0016887 (17.9%) GO:0042802 (4.8%)" "cellular response to heat (17.9%) protein refolding (17.1%) proteolysis (2.9%)" "cytoplasm (13.1%) cytosol (4.8%) membrane (0%)" "ATP binding (17.9%) ATP hydrolysis activity (17.9%) identical protein binding (4.8%)" "IPR050130 (8.4%) IPR003593 (8.4%) IPR003959 (8.4%)" "ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.4%) AAA+ ATPase domain (8.4%) ATPase, AAA-type, core (8.4%)" VTGLPAIADDSGLAVDALGGAPGIYSAR root 3.6.1.66 (100%) XTP/dITP diphosphatase (100%) "GO:0009117 (11.5%) GO:0009146 (11.4%) GO:0009143 (0.1%)" "GO:0005829 (11.4%) GO:0005840 (0.4%)" "GO:0000166 (11.4%) GO:0035870 (11.4%) GO:0036222 (11.4%)" "nucleotide metabolic process (11.5%) purine nucleoside triphosphate catabolic process (11.4%) nucleoside triphosphate catabolic process (0.1%)" "cytosol (11.4%) ribosome (0.4%)" "nucleotide binding (11.4%) dITP diphosphatase activity (11.4%) XTP diphosphatase activity (11.4%)" "IPR002637 (33.6%) IPR029001 (33.6%) IPR020922 (32.7%)" "RdgB/HAM1 (33.6%) Inosine triphosphate pyrophosphatase-like (33.6%) dITP/XTP pyrophosphatase (32.7%)" VIAGMAGTTYGTDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR002318 (9.1%) IPR003156 (9.1%) IPR009000 (9.1%)" "Alanine-tRNA ligase, class IIc (9.1%) DHHA1 domain (9.1%) Translation protein, beta-barrel domain superfamily (9.1%)" IAAVHAIANLAK Pseudomonadati Bacteria Pseudomonadati 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (17.1%) "GO:0051287 (17.4%) GO:0016746 (17.3%) GO:0046872 (17.3%)" malate metabolic process (17.1%) "NAD binding (17.4%) acyltransferase activity (17.3%) metal ion binding (17.3%)" "IPR012302 (9%) IPR036291 (9%) IPR045213 (9%)" "Malic enzyme, NAD-binding (9%) NAD(P)-binding domain superfamily (9%) Malic enzyme, NAD-binding domain, bacterial type (9%)" ELHTSQALDAINYEVLDDYRTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (16.7%) IPR014628 (16.7%) IPR014710 (16.7%)" "RmlC-like cupin domain superfamily (16.7%) Mannose-6-phosphate isomerase, Firmicutes type, short form (16.7%) RmlC-like jelly roll fold (16.7%)" QYQNQGLSLPDLINEGNLGLIK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006352 (33.2%) GO:0006355 (0.1%)" GO:1903865 (0.1%) "GO:0016987 (33.2%) GO:0003677 (33.2%) GO:0003899 (0.1%)" "DNA-templated transcription initiation (33.2%) regulation of DNA-templated transcription (0.1%)" sigma factor antagonist complex (0.1%) "sigma factor activity (33.2%) DNA binding (33.2%) DNA-directed RNA polymerase activity (0.1%)" "IPR007627 (10.1%) IPR013325 (10.1%) IPR050239 (10.1%)" "RNA polymerase sigma-70 region 2 (10.1%) RNA polymerase sigma factor, region 2 (10.1%) Sigma-70 factor family, RNA polymerase initiation factors (10.1%)" EIFIESIHETATLIAEQLYER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.17.4.2 (100%) ribonucleoside-triphosphate reductase (thioredoxin) (100%) "GO:0006260 (16.4%) GO:0009265 (16.4%)" GO:0031250 (16.4%) "GO:0004748 (16.4%) GO:0005524 (16.4%) GO:0008998 (16.4%)" "DNA replication (16.4%) 2'-deoxyribonucleotide biosynthetic process (16.4%)" anaerobic ribonucleoside-triphosphate reductase complex (16.4%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.4%) ATP binding (16.4%) ribonucleoside-triphosphate reductase (thioredoxin) activity (16.4%)" "IPR005144 (50%) IPR012833 (50%)" "ATP-cone domain (50%) Ribonucleoside-triphosphate reductase, anaerobic (50%)" LTYFTGEVTGPDGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" ISGEVAKPLTLDHDDLTR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.8.5.- (97.1%) 1.8.-.- (2.9%)" "With a quinone or similar compound as acceptor (97.1%) Acting on a sulfur group of donors (2.9%)" "GO:0030091 (19.8%) GO:1901530 (0.2%)" "GO:0042597 (19.5%) GO:0030288 (0.2%)" "GO:0043546 (19.8%) GO:0046872 (19.8%) GO:0016672 (19.6%)" "protein repair (19.8%) response to hypochlorite (0.2%)" "periplasmic space (19.5%) outer membrane-bounded periplasmic space (0.2%)" "molybdopterin cofactor binding (19.8%) metal ion binding (19.8%) oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor (19.6%)" "IPR000572 (25.6%) IPR036374 (25.6%) IPR006311 (24.5%)" "Oxidoreductase, molybdopterin-binding domain (25.6%) Oxidoreductase, molybdopterin-binding domain superfamily (25.6%) Twin-arginine translocation pathway, signal sequence (24.5%)" TDEGREWEDILPVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.9%) GO:0006164 (0.5%)" GO:0005737 (19.9%) "GO:0004642 (19.9%) GO:0005524 (19.9%) GO:0046872 (19.9%)" "'de novo' IMP biosynthetic process (19.9%) purine nucleotide biosynthetic process (0.5%)" cytoplasm (19.9%) "phosphoribosylformylglycinamidine synthase activity (19.9%) ATP binding (19.9%) metal ion binding (19.9%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" VIDSYTTAIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0042254 (29.6%) "GO:0005525 (29.6%) GO:0043022 (29.6%) GO:0016787 (11.1%)" ribosome biogenesis (29.6%) "GTP binding (29.6%) ribosome binding (29.6%) hydrolase activity (11.1%)" "IPR005225 (14.3%) IPR006073 (14.3%) IPR015946 (14.3%)" "Small GTP-binding domain (14.3%) GTP binding domain (14.3%) K homology domain-like, alpha/beta (14.3%)" IGDCYFFPAQIIVEENAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) FTNIGDAPLVIHQAVASCGCTVPEYTQEPIMPGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011467 (50%) IPR013783 (50%)" "Protein of unknown function DUF1573 (50%) Immunoglobulin-like fold (50%)" NNDAVSGIVKLEIVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" LNELIEDEKQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR012912 (50%) IPR024047 (50%)" "Plasmid pRiA4b, Orf3-like domain (50%) MM3350-like superfamily (50%)" ALVEKIPAALVNER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0017004 (25%) GO:0030313 (25%) "GO:0016209 (25%) GO:0016491 (25%)" cytochrome complex assembly (25%) cell envelope (25%) "antioxidant activity (25%) oxidoreductase activity (25%)" "IPR000866 (16.7%) IPR013766 (16.7%) IPR017937 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Thioredoxin, conserved site (16.7%)" RCEEEGVIFIGPSADVIAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "6.3.4.14 (64.3%) 6.4.1.7 (21.4%) 6.4.1.1 (7.1%)" "biotin carboxylase (64.3%) 2-oxoglutarate carboxylase (21.4%) pyruvate carboxylase (7.1%)" GO:2001295 (18.5%) "GO:0005524 (21.5%) GO:0046872 (21.5%) GO:0003989 (16.9%)" malonyl-CoA biosynthetic process (18.5%) "ATP binding (21.5%) metal ion binding (21.5%) acetyl-CoA carboxylase activity (16.9%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" GYSAELCPDGEAGYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (20%) IPR001867 (20%) IPR011006 (20%)" "Signal transduction response regulator, receiver domain (20%) OmpR/PhoB-type DNA-binding domain (20%) CheY-like superfamily (20%)" AKTDPLMIYECHIGMAQEEER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) "GO:0005737 (20%) GO:0016020 (1.1%)" "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (18.9%)" glycogen biosynthetic process (20%) "cytoplasm (20%) membrane (1.1%)" "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (18.9%)" "IPR004193 (12.7%) IPR006047 (12.7%) IPR013783 (12.7%)" "Glycoside hydrolase, family 13, N-terminal (12.7%) Glycosyl hydrolase family 13, catalytic domain (12.7%) Immunoglobulin-like fold (12.7%)" GHADLIISLEPMESLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.7.1 (66.7%) 1.2.7.8 (33.3%)" "pyruvate synthase (66.7%) indolepyruvate ferredoxin oxidoreductase (33.3%)" "GO:0016903 (85.7%) GO:0019164 (14.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (85.7%) pyruvate synthase activity (14.3%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052198 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) Indolepyruvate oxidoreductase subunit IorB-like (33.3%)" EVPGFEVNKPEGAFYLFPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" SDVEKKSETQEAAPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0003700 (50%) GO:0043565 (50%)" "DNA-binding transcription factor activity (50%) sequence-specific DNA binding (50%)" "IPR018060 (52%) IPR009057 (48%)" "AraC-like, DNA binding HTH domain (52%) Homedomain-like superfamily (48%)" WLEVSSVSNFDTYQANR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (24.9%) "GO:0005737 (24.8%) GO:0005829 (0.1%)" "GO:0004828 (24.9%) GO:0005524 (24.9%) GO:0016874 (0.3%)" seryl-tRNA aminoacylation (24.9%) "cytoplasm (24.8%) cytosol (0.1%)" "serine-tRNA ligase activity (24.9%) ATP binding (24.9%) ligase activity (0.3%)" "IPR002314 (13.9%) IPR002317 (13.9%) IPR006195 (13.9%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (13.9%) Serine-tRNA ligase, type1 (13.9%) Aminoacyl-tRNA synthetase, class II (13.9%)" VLMLEADSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.6%) "GO:0000428 (16.9%) GO:0005737 (16.6%)" "GO:0003899 (16.6%) GO:0046983 (16.6%) GO:0003677 (16.3%)" DNA-templated transcription (16.6%) "DNA-directed RNA polymerase complex (16.9%) cytoplasm (16.6%)" "DNA-directed RNA polymerase activity (16.6%) protein dimerization activity (16.6%) DNA binding (16.3%)" "IPR011262 (16.8%) IPR011263 (16.8%) IPR036603 (16.8%)" "DNA-directed RNA polymerase, insert domain (16.8%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) RNA polymerase, RBP11-like subunit (16.8%)" YFDDPSTITEEEIMVAIRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" QQFDKPSVTKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.9%) "GO:0005840 (25.3%) GO:1990904 (24.9%)" GO:0003735 (24.9%) translation (24.9%) "ribosome (25.3%) ribonucleoprotein complex (24.9%)" structural constituent of ribosome (24.9%) "IPR001911 (50%) IPR038380 (50%)" "Small ribosomal subunit protein bS21 (50%) Small ribosomal subunit protein bS21 superfamily (50%)" FFNTGKEYDADEIGVLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.6.5.0 (98.5%) 3.6.5.- (1.5%)" "Unknown (98.5%) Acting on GTP; involved in cellular and subcellular movement (1.5%)" GO:0045727 (16.9%) GO:0005886 (16.1%) "GO:0003924 (16.9%) GO:0005525 (16.9%) GO:0043022 (16.9%)" positive regulation of translation (16.9%) plasma membrane (16.1%) "GTPase activity (16.9%) GTP binding (16.9%) ribosome binding (16.9%)" "IPR000795 (10.1%) IPR004161 (10.1%) IPR005225 (10.1%)" "Translational (tr)-type GTP-binding domain (10.1%) Translation elongation factor EFTu-like, domain 2 (10.1%) Small GTP-binding domain (10.1%)" GAIFQISHLVSVEEIKD Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus GO:0006412 (32.6%) "GO:0015934 (22.1%) GO:0022625 (10.5%) GO:0005840 (2.1%)" GO:0003735 (32.6%) translation (32.6%) "large ribosomal subunit (22.1%) cytosolic large ribosomal subunit (10.5%) ribosome (2.1%)" structural constituent of ribosome (32.6%) "IPR005996 (33.3%) IPR016082 (33.3%) IPR036919 (33.3%)" "Large ribosomal subunit protein uL30, bacteria (33.3%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (33.3%) Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily (33.3%)" MLDEYLALMEEAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.6%) GO:0005737 (16.6%) "GO:0000049 (16.6%) GO:0004829 (16.6%) GO:0005524 (16.6%)" threonyl-tRNA aminoacylation (16.6%) cytoplasm (16.6%) "tRNA binding (16.6%) threonine-tRNA ligase activity (16.6%) ATP binding (16.6%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" EGVTLAEYSMIQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.9 (100%) Xaa-Pro dipeptidase (100%) GO:0005737 (31.5%) "GO:0046872 (31.5%) GO:0070006 (31.5%) GO:0102009 (3.7%)" cytoplasm (31.5%) "metal ion binding (31.5%) metalloaminopeptidase activity (31.5%) proline dipeptidase activity (3.7%)" "IPR000587 (14.3%) IPR000994 (14.3%) IPR029149 (14.3%)" "Creatinase, N-terminal (14.3%) Peptidase M24 (14.3%) Creatinase/Aminopeptidase P/Spt16, N-terminal (14.3%)" ETLDKMVERLEEFDDVQTVYTNMKPASEEEE Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006355 (33.3%) GO:0005829 (33.3%) GO:0003677 (33.3%) regulation of DNA-templated transcription (33.3%) cytosol (33.3%) DNA binding (33.3%) "IPR002876 (16.7%) IPR017856 (16.7%) IPR026564 (16.7%)" "Transcriptional regulator TACO1-like (16.7%) Integrase-like, N-terminal (16.7%) Transcriptional regulator TACO1-like, domain 3 (16.7%)" VEAHATTPFWR root "GO:0006974 (20%) GO:0051604 (20%) GO:0071978 (20%)" "GO:0005737 (20%) GO:0005829 (20%)" "DNA damage response (20%) protein maturation (20%) bacterial-type flagellum-dependent swarming motility (20%)" "cytoplasm (20%) cytosol (20%)" "IPR036411 (25.5%) IPR050289 (25.4%) IPR020945 (24.9%)" "TorD-like superfamily (25.5%) TorD/DmsD family chaperones (25.4%) DMSO/Nitrate reductase chaperone (24.9%)" AANTISPVAALQGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0044718 (1.6%) GO:0009279 (95.2%) "GO:0004180 (1.6%) GO:0015344 (1.6%)" siderophore transmembrane transport (1.6%) cell outer membrane (95.2%) "carboxypeptidase activity (1.6%) siderophore uptake transmembrane transporter activity (1.6%)" "IPR012910 (14.7%) IPR037066 (14.7%) IPR039426 (14.7%)" "TonB-dependent receptor, plug domain (14.7%) TonB-dependent receptor, plug domain superfamily (14.7%) TonB-dependent receptor-like (14.7%)" SFGVGDFGDLKR Pseudomonadati Bacteria Pseudomonadati 2.4.1.25 (100%) 4-alpha-glucanotransferase (100%) GO:0005975 (24.8%) GO:0005737 (25%) "GO:2001070 (25%) GO:0004134 (24.8%) GO:0016757 (0.3%)" carbohydrate metabolic process (24.8%) cytoplasm (25%) "starch binding (25%) 4-alpha-glucanotransferase activity (24.8%) glycosyltransferase activity (0.3%)" "IPR002044 (17.3%) IPR013783 (17.3%) IPR013784 (17.3%)" "Carbohydrate binding module family 20 (17.3%) Immunoglobulin-like fold (17.3%) Carbohydrate-binding-like fold (17.3%)" GLHYQLAPYAQAK Pseudomonadati Bacteria Pseudomonadati 5.1.3.13 (100%) dTDP-4-dehydrorhamnose 3,5-epimerase (100%) "GO:0019305 (25%) GO:0000271 (22.2%) GO:0009103 (2.8%)" GO:0005829 (25%) GO:0008830 (25%) "dTDP-rhamnose biosynthetic process (25%) polysaccharide biosynthetic process (22.2%) lipopolysaccharide biosynthetic process (2.8%)" cytosol (25%) dTDP-4-dehydrorhamnose 3,5-epimerase activity (25%) "IPR000888 (33.3%) IPR011051 (33.3%) IPR014710 (33.3%)" "dTDP-4-dehydrorhamnose 3,5-epimerase-like (33.3%) RmlC-like cupin domain superfamily (33.3%) RmlC-like jelly roll fold (33.3%)" AQYDTVLANEVTAR root "GO:0046677 (19.3%) GO:0009410 (0%) GO:0009636 (0%)" "GO:1990281 (20.1%) GO:0009279 (20%) GO:0019867 (0.1%)" "GO:0015288 (20.1%) GO:0015562 (20.1%) GO:0005216 (0%)" "response to antibiotic (19.3%) response to xenobiotic stimulus (0%) response to toxic substance (0%)" "efflux pump complex (20.1%) cell outer membrane (20%) outer membrane (0.1%)" "porin activity (20.1%) efflux transmembrane transporter activity (20.1%) monoatomic ion channel activity (0%)" "IPR003423 (33.5%) IPR051906 (33.5%) IPR010130 (33.1%)" "Outer membrane efflux protein (33.5%) Outer membrane protein TolC-like (33.5%) Type I secretion outer membrane protein, TolC (33.1%)" DLPILCNQWANVFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%) GO:0016874 (0.2%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%) ligase activity (0.2%)" "IPR002314 (11.2%) IPR004499 (11.2%) IPR006195 (11.2%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.2%) Proline-tRNA ligase, class IIa, archaeal-type (11.2%) Aminoacyl-tRNA synthetase, class II (11.2%)" QVQQPVMDR root 3.4.24.- (100%) Metalloendopeptidases (100%) "GO:0000917 (13.4%) GO:0043093 (13.3%) GO:0051258 (13.3%)" "GO:0005737 (14.4%) GO:0032153 (14.4%) GO:0005886 (0.1%)" "GO:0005525 (14.6%) GO:0003924 (14.4%) GO:0016787 (0.1%)" "division septum assembly (13.4%) FtsZ-dependent cytokinesis (13.3%) protein polymerization (13.3%)" "cytoplasm (14.4%) cell division site (14.4%) plasma membrane (0.1%)" "GTP binding (14.6%) GTPase activity (14.4%) hydrolase activity (0.1%)" "IPR008280 (11.5%) IPR037103 (11.5%) IPR024757 (11.4%)" "Tubulin/FtsZ, C-terminal (11.5%) Tubulin/FtsZ-like, C-terminal domain (11.5%) Cell division protein FtsZ, C-terminal (11.4%)" GILTAEGAEIINEENWGLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (16.8%) "GO:0005737 (16.8%) GO:0005840 (16.8%) GO:1990904 (15.9%)" "GO:0003735 (16.8%) GO:0070181 (16.8%)" translation (16.8%) "cytoplasm (16.8%) ribosome (16.8%) ribonucleoprotein complex (15.9%)" "structural constituent of ribosome (16.8%) small ribosomal subunit rRNA binding (16.8%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" GVEYFSNHIYPR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "1.3.-.- (86.7%) 1.3.1.14 (13.3%)" "Acting on the CH-CH group of donors (86.7%) dihydroorotate dehydrogenase (NAD(+)) (13.3%)" "GO:0006207 (25%) GO:0044205 (25%)" GO:0005737 (25%) "GO:0004589 (13.3%) GO:0004152 (11.7%)" "'de novo' pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" cytoplasm (25%) "dihydroorotate dehydrogenase (NAD+) activity (13.3%) dihydroorotate dehydrogenase activity (11.7%)" "IPR001295 (12.5%) IPR005720 (12.5%) IPR012135 (12.5%)" "Dihydroorotate dehydrogenase, conserved site (12.5%) Dihydroorotate dehydrogenase, catalytic (12.5%) Dihydroorotate dehydrogenase, class 1/ 2 (12.5%)" HIEGFTDIEAFVESIALPR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" DIANENGLTFWLVGDQIKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0019877 (11%) GO:0009088 (10.7%) GO:0009089 (10.7%)" "GO:0046983 (11.7%) GO:0004073 (11%) GO:0050661 (11%)" "diaminopimelate biosynthetic process (11%) threonine biosynthetic process (10.7%) lysine biosynthetic process via diaminopimelate (10.7%)" "protein dimerization activity (11.7%) aspartate-semialdehyde dehydrogenase activity (11%) NADP binding (11%)" "IPR012280 (17.9%) IPR000319 (16.9%) IPR000534 (16.4%)" "Semialdehyde dehydrogenase, dimerisation domain (17.9%) Aspartate-semialdehyde dehydrogenase, conserved site (16.9%) Semialdehyde dehydrogenase, NAD-binding (16.4%)" QATKEAGEIAGLTVR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0005737 (17.3%) GO:0070013 (1.2%)" "GO:0005524 (29.9%) GO:0140662 (29.9%) GO:0051082 (21.7%)" "cytoplasm (17.3%) intracellular organelle lumen (1.2%)" "ATP binding (29.9%) ATP-dependent protein folding chaperone (29.9%) unfolded protein binding (21.7%)" "IPR013126 (19.2%) IPR018181 (19.2%) IPR043129 (19.2%)" "Heat shock protein 70 family (19.2%) Heat shock protein 70, conserved site (19.2%) ATPase, nucleotide binding domain (19.2%)" IVEEYKAQFSEEELTDEKLEMIGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.4%) GO:0006402 (14.4%)" GO:0005829 (14.4%) "GO:0000175 (14.4%) GO:0003723 (14.4%) GO:0004654 (14.4%)" "RNA processing (14.4%) mRNA catabolic process (14.4%)" cytosol (14.4%) "3'-5'-RNA exonuclease activity (14.4%) RNA binding (14.4%) polyribonucleotide nucleotidyltransferase activity (14.4%)" "IPR001247 (8.5%) IPR012162 (8.5%) IPR015847 (8.5%)" "Exoribonuclease, phosphorolytic domain 1 (8.5%) Polyribonucleotide nucleotidyltransferase (8.5%) Exoribonuclease, phosphorolytic domain 2 (8.5%)" NGSKGYENHPVVVIQGHMDMVCEK RVGGATYQVPVEVKPGR Actinomycetes Bacteria Bacillati Actinomycetota Actinomycetes GO:0006412 (20%) GO:0015935 (20%) "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) small ribosomal subunit (20%) "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000235 (20%) IPR005717 (20%) IPR023798 (20%)" "Small ribosomal subunit protein uS7 (20%) Small ribosomal subunit protein uS7, bacteria/organella (20%) Small ribosomal subunit protein uS7 domain (20%)" VDFTAEQLKENLEALLVALK Plesiomonas shigelloides Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Plesiomonas Plesiomonas shigelloides "GO:0006412 (16.7%) GO:0006417 (16.7%)" GO:0022625 (16.7%) "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" "translation (16.7%) regulation of translation (16.7%)" cytosolic large ribosomal subunit (16.7%) "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR002143 (16.7%) IPR005878 (16.7%) IPR016095 (16.7%)" "Large ribosomal subunit protein uL1 (16.7%) Large ribosomal subunit protein uL1, bacteria (16.7%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" LREADPALYEDMLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20.8%) GO:0009263 (16.7%)" "GO:0004748 (20.8%) GO:0031419 (20.8%) GO:0005524 (16.7%)" "DNA biosynthetic process (20.8%) deoxyribonucleotide biosynthetic process (16.7%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.8%) cobalamin binding (20.8%) ATP binding (16.7%)" "IPR000788 (26.3%) IPR013344 (26.3%) IPR050862 (26.3%)" "Ribonucleotide reductase large subunit, C-terminal (26.3%) Ribonucleotide reductase, adenosylcobalamin-dependent (26.3%) Ribonucleoside diphosphate reductase class-2 (26.3%)" AAPNTIPTAAK root 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009098 (15%) GO:0009099 (15%) GO:0006532 (14.9%)" GO:0005829 (14.9%) "GO:0004084 (9.2%) GO:0052654 (5.9%) GO:0052655 (5.9%)" "L-leucine biosynthetic process (15%) L-valine biosynthetic process (15%) aspartate biosynthetic process (14.9%)" cytosol (14.9%) "branched-chain-amino-acid transaminase activity (9.2%) L-leucine-2-oxoglutarate transaminase activity (5.9%) L-valine-2-oxoglutarate transaminase activity (5.9%)" "IPR001544 (12.6%) IPR036038 (12.6%) IPR043132 (12.6%)" "Aminotransferase class IV (12.6%) Aminotransferase-like, PLP-dependent enzymes (12.6%) Branched-chain-amino-acid aminotransferase-like, C-terminal (12.6%)" HFTNFDPLYKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) GO:0005737 (20%) "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (20%)" glycogen biosynthetic process (20%) cytoplasm (20%) "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (20%)" "IPR004193 (12.5%) IPR006047 (12.5%) IPR006048 (12.5%)" "Glycoside hydrolase, family 13, N-terminal (12.5%) Glycosyl hydrolase family 13, catalytic domain (12.5%) Alpha-amylase/branching enzyme, C-terminal all beta (12.5%)" DLENAAILYDEIDRNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" ALAEAGCSAVK root 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (20.2%) GO:0006177 (20.1%) GO:0009411 (0%)" "GO:0005737 (0.1%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0003938 (20.2%) GO:0046872 (20.1%) GO:0000166 (18.6%)" "GTP biosynthetic process (20.2%) GMP biosynthetic process (20.1%) response to UV (0%)" "cytoplasm (0.1%) cytosol (0%) plasma membrane (0%)" "IMP dehydrogenase activity (20.2%) metal ion binding (20.1%) nucleotide binding (18.6%)" "IPR001093 (16.9%) IPR005990 (16.9%) IPR013785 (16.9%)" "IMP dehydrogenase/GMP reductase (16.9%) Inosine-5'-monophosphate dehydrogenase (16.9%) Aldolase-type TIM barrel (16.9%)" LSLNNILGKIEGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.11.24 (100%) aminopeptidase S (100%) GO:0006508 (41.7%) "GO:0008235 (41.7%) GO:0004177 (16.7%)" proteolysis (41.7%) "metalloexopeptidase activity (41.7%) aminopeptidase activity (16.7%)" "IPR007484 (50%) IPR045175 (50%)" "Peptidase M28 (50%) Peptidase M28 family (50%)" YSFTDEQGQPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR015943 (53.8%) IPR031815 (46.2%)" "WD40/YVTN repeat-like-containing domain superfamily (53.8%) Protein of unknown function DUF5074 (46.2%)" TAIDHFFHLCEELR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.2.1.75 (100%) uroporphyrinogen-III synthase (100%) "GO:0006780 (32.4%) GO:0032259 (1.4%)" GO:0005829 (32.4%) "GO:0004852 (32.4%) GO:0008168 (1.4%)" "uroporphyrinogen III biosynthetic process (32.4%) methylation (1.4%)" cytosol (32.4%) "uroporphyrinogen-III synthase activity (32.4%) methyltransferase activity (1.4%)" "IPR003754 (33.3%) IPR036108 (33.3%) IPR039793 (33.3%)" "Tetrapyrrole biosynthesis, uroporphyrinogen III synthase (33.3%) Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily (33.3%) Uroporphyrinogen-III synthase (33.3%)" VLSESEEEIAEQKAEQEAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006261 (12.5%) GO:0006265 (12.5%)" "GO:0005694 (12.5%) GO:0005737 (12.5%) GO:0009330 (12.5%)" "GO:0003677 (12.5%) GO:0005524 (12.5%) GO:0034335 (12.5%)" "DNA-templated DNA replication (12.5%) DNA topological change (12.5%)" "chromosome (12.5%) cytoplasm (12.5%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.5%)" "DNA binding (12.5%) ATP binding (12.5%) DNA negative supercoiling activity (12.5%)" "IPR002205 (12.5%) IPR005743 (12.5%) IPR006691 (12.5%)" "DNA topoisomerase, type IIA, domain A (12.5%) DNA gyrase, subunit A (12.5%) DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.5%)" VTYTEPGIKGDTATNTLKPATVESGATVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043043 (33.3%) "GO:0005829 (31.4%) GO:0005737 (2%)" GO:0003746 (33.3%) peptide biosynthetic process (33.3%) "cytosol (31.4%) cytoplasm (2%)" translation elongation factor activity (33.3%) "IPR001059 (11.1%) IPR008991 (11.1%) IPR011768 (11.1%)" "Translation elongation factor P/YeiP, central (11.1%) Translation protein SH3-like domain superfamily (11.1%) Translation elongation factor P (11.1%)" VIIDFVPNHVAR Pseudomonadati Bacteria Pseudomonadati "3.2.1.135 (47.5%) 3.2.1.1 (42.5%) 2.4.99.16 (7.5%)" "neopullulanase (47.5%) alpha-amylase (42.5%) starch synthase (maltosyl-transferring) (7.5%)" "GO:0009313 (43.6%) GO:0043039 (1.7%)" GO:0016020 (0.6%) "GO:0004556 (43.6%) GO:0043169 (2.9%) GO:0031216 (2%)" "oligosaccharide catabolic process (43.6%) tRNA aminoacylation (1.7%)" membrane (0.6%) "alpha-amylase activity (43.6%) cation binding (2.9%) neopullulanase activity (2%)" "IPR006047 (39.5%) IPR017853 (39.5%) IPR013780 (14.5%)" "Glycosyl hydrolase family 13, catalytic domain (39.5%) Glycoside hydrolase superfamily (39.5%) Glycosyl hydrolase, all-beta (14.5%)" LADVEDPEQK root 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) "GO:0000956 (4.5%) GO:0016075 (4.5%) GO:0006397 (2.3%)" "GO:0005829 (25%) GO:0005634 (4.5%)" "GO:0003921 (25%) GO:0005524 (25%) GO:0003723 (4.5%)" "nuclear-transcribed mRNA catabolic process (4.5%) rRNA catabolic process (4.5%) mRNA processing (2.3%)" "cytosol (25%) nucleus (4.5%)" "GMP synthase activity (25%) ATP binding (25%) RNA binding (4.5%)" "IPR001674 (12.6%) IPR014729 (12.6%) IPR017926 (12.6%)" "GMP synthase, C-terminal (12.6%) Rossmann-like alpha/beta/alpha sandwich fold (12.6%) Glutamine amidotransferase (12.6%)" MAMHGVDTPIDYLNSHGTSTPVGDVK root 2.3.1.41 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase I (100%) "GO:0006633 (33.2%) GO:0044281 (0.1%) GO:1903966 (0.1%)" "GO:0005829 (33.2%) GO:0016020 (0.1%)" "GO:0004315 (33.2%) GO:0016746 (0.2%) GO:0022857 (0.1%)" "fatty acid biosynthetic process (33.2%) small molecule metabolic process (0.1%) monounsaturated fatty acid biosynthetic process (0.1%)" "cytosol (33.2%) membrane (0.1%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (33.2%) acyltransferase activity (0.2%) transmembrane transporter activity (0.1%)" "IPR014031 (16.8%) IPR016039 (16.8%) IPR000794 (16.8%)" "Beta-ketoacyl synthase, C-terminal (16.8%) Thiolase-like (16.8%) Beta-ketoacyl synthase (16.8%)" VIQVSDFVGSTAALLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.5.1.72 (100%) quinolinate synthase (100%) GO:0034628 (20%) GO:0005829 (20%) "GO:0008987 (20%) GO:0046872 (20%) GO:0051539 (20%)" 'de novo' NAD+ biosynthetic process from L-aspartate (20%) cytosol (20%) "quinolinate synthetase A activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR003473 (33.3%) IPR023066 (33.3%) IPR036094 (33.3%)" "Quinolinate synthetase A (33.3%) Quinolinate synthase A, type 2 (33.3%) Quinolinate synthetase A superfamily (33.3%)" GSNDFVNVFDIAVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" LFNLAEAEGLTGMGVTHYIEDHIDLANVLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.4.2.14 (100%) amidophosphoribosyltransferase (100%) "GO:0016757 (47.1%) GO:0016740 (35.3%) GO:0004044 (17.6%)" "glycosyltransferase activity (47.1%) transferase activity (35.3%) amidophosphoribosyltransferase activity (17.6%)" "IPR000836 (25%) IPR017932 (25%) IPR029055 (25%)" "Phosphoribosyltransferase domain (25%) Glutamine amidotransferase type 2 domain (25%) Nucleophile aminohydrolases, N-terminal (25%)" MYHTVTPPYSVIQGGTDKPAENPNCSWGYDTR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" VLNAGVVVLTESSLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" NKSEITDEEYKEFYK root "GO:0006457 (0.1%) GO:0006974 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (19.4%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0005524 (19.7%) GO:0016887 (19.7%) GO:0051082 (19.7%)" "protein folding (0.1%) DNA damage response (0.1%) response to heat (0.1%)" "cytoplasm (19.4%) cytosol (0.1%) plasma membrane (0.1%)" "ATP binding (19.7%) ATP hydrolysis activity (19.7%) unfolded protein binding (19.7%)" "IPR001404 (15.1%) IPR020568 (15%) IPR036890 (14.8%)" "Heat shock protein Hsp90 family (15.1%) Ribosomal protein uS5 domain 2-type superfamily (15%) Histidine kinase/HSP90-like ATPase superfamily (14.8%)" TILETEGIEVYIHNVNQIQPVVSAGVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR006015 (33.3%) IPR006016 (33.3%) IPR014729 (31.4%)" "Universal stress protein A family (33.3%) UspA (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (31.4%)" KVSCALSLSQDSENVNGMAAPSDLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006508 (33.3%) "GO:0004222 (33.3%) GO:0046872 (33.3%)" proteolysis (33.3%) "metalloendopeptidase activity (33.3%) metal ion binding (33.3%)" "IPR001431 (20%) IPR007863 (20%) IPR011249 (20%)" "Peptidase M16, zinc-binding site (20%) Peptidase M16, C-terminal (20%) Metalloenzyme, LuxS/M16 peptidase-like (20%)" EGEVSPLYECGENDHLMVVALEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (62.5%) "GO:0016853 (34.4%) GO:0003755 (3.1%)" plasma membrane (62.5%) "isomerase activity (34.4%) peptidyl-prolyl cis-trans isomerase activity (3.1%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" VVSAEPFGNGHINDTLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.- (100%) Phosphotransferases with an alcohol group as acceptor (100%) GO:0016740 (100%) transferase activity (100%) "IPR002575 (33.3%) IPR011009 (33.3%) IPR050249 (33.3%)" "Aminoglycoside phosphotransferase (33.3%) Protein kinase-like domain superfamily (33.3%) Pseudomonas-type Homoserine Kinase (33.3%)" HQPLLEQHVLYATGTTGNLISR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 4.2.3.3 (100%) methylglyoxal synthase (100%) "GO:0019242 (32.8%) GO:0034214 (0.3%)" GO:0005829 (32.8%) "GO:0008929 (32.8%) GO:0016829 (1%) GO:0042802 (0.3%)" "methylglyoxal biosynthetic process (32.8%) protein hexamerization (0.3%)" cytosol (32.8%) "methylglyoxal synthase activity (32.8%) lyase activity (1%) identical protein binding (0.3%)" "IPR004363 (25.4%) IPR036914 (25.4%) IPR011607 (24.6%)" "Methylglyoxal synthase (25.4%) Methylglyoxal synthase-like domain superfamily (25.4%) Methylglyoxal synthase-like domain (24.6%)" KTFAEKPAEFDPR Pseudomonadati Bacteria Pseudomonadati 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.3%) GO:0030388 (24.3%) GO:0005975 (0.7%)" "GO:0008270 (25%) GO:0004332 (24.3%) GO:0016829 (0.7%)" "glycolytic process (24.3%) fructose 1,6-bisphosphate metabolic process (24.3%) carbohydrate metabolic process (0.7%)" "zinc ion binding (25%) fructose-bisphosphate aldolase activity (24.3%) lyase activity (0.7%)" "IPR000771 (25.2%) IPR013785 (25.2%) IPR050246 (25.2%)" "Fructose-bisphosphate aldolase, class-II (25.2%) Aldolase-type TIM barrel (25.2%) Class II Fructose-bisphosphate Aldolase (25.2%)" DRGLSTAVGDEGGFAPNLEGTEDALNSILAAIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0005576 (16.7%) GO:0000015 (16.5%) GO:0009986 (16.2%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.4%)" glycolytic process (16.7%) "extracellular region (16.7%) phosphopyruvate hydratase complex (16.5%) cell surface (16.2%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.4%)" "IPR000941 (16.7%) IPR020810 (16.7%) IPR029017 (16.7%)" "Enolase (16.7%) Enolase, C-terminal TIM barrel domain (16.7%) Enolase-like, N-terminal (16.7%)" VVDGGYFFEVMQNFAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0015977 (21.8%) GO:0009317 (21.8%) "GO:0003989 (21.8%) GO:0004658 (21.8%) GO:0016740 (12.8%)" carbon fixation (21.8%) acetyl-CoA carboxylase complex (21.8%) "acetyl-CoA carboxylase activity (21.8%) propionyl-CoA carboxylase activity (21.8%) transferase activity (12.8%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" TLLVDKLLVLTNGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (14.3%) GO:0006508 (14.3%)" GO:0000428 (14.3%) "GO:0003677 (14.3%) GO:0003899 (14.3%) GO:0004190 (14.3%)" "DNA-templated transcription (14.3%) proteolysis (14.3%)" DNA-directed RNA polymerase complex (14.3%) "DNA binding (14.3%) DNA-directed RNA polymerase activity (14.3%) aspartic-type endopeptidase activity (14.3%)" "IPR001969 (7.1%) IPR007120 (7.1%) IPR007121 (7.1%)" "Aspartic peptidase, active site (7.1%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.1%) RNA polymerase, beta subunit, conserved site (7.1%)" GIIFGALNEQSIAWK Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.3.1.9 (99.2%) 1.3.1.10 (0.8%)" "enoyl-[acyl-carrier-protein] reductase (NADH) (99.2%) enoyl-[acyl-carrier-protein] reductase (NADPH, Si-specific) (0.8%)" GO:0006633 (49.8%) "GO:0004318 (50%) GO:0016491 (0.2%)" fatty acid biosynthetic process (49.8%) "enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) oxidoreductase activity (0.2%)" "IPR002347 (33.4%) IPR036291 (33.4%) IPR014358 (33.2%)" "Short-chain dehydrogenase/reductase SDR (33.4%) NAD(P)-binding domain superfamily (33.4%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.2%)" VLNQEGLQKIETDGENFDTDYHEAIALVPAPSEEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006457 (16.7%) GO:0005737 (16.7%) "GO:0000774 (16.7%) GO:0042803 (16.7%) GO:0051082 (16.7%)" protein folding (16.7%) cytoplasm (16.7%) "adenyl-nucleotide exchange factor activity (16.7%) protein homodimerization activity (16.7%) unfolded protein binding (16.7%)" "IPR000740 (33.3%) IPR009012 (33.3%) IPR013805 (33.3%)" "GrpE nucleotide exchange factor (33.3%) GrpE nucleotide exchange factor, head (33.3%) GrpE nucleotide exchange factor, coiled-coil (33.3%)" EQVIINTWYGGEMKK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.6%) GO:0005829 (17.6%) "GO:0004612 (17.6%) GO:0005524 (17.6%) GO:0046872 (17.3%)" gluconeogenesis (17.6%) cytosol (17.6%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.6%) ATP binding (17.6%) metal ion binding (17.3%)" "IPR001272 (25.2%) IPR008210 (25.2%) IPR013035 (24.9%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.2%) Phosphoenolpyruvate carboxykinase, N-terminal (25.2%) Phosphoenolpyruvate carboxykinase, C-terminal (24.9%)" LFPNTYGMPLIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" VIPTTVEIVDIAGLVK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0005737 (20.2%) "GO:0005524 (20.2%) GO:0005525 (20.2%) GO:0016887 (20.2%)" cytoplasm (20.2%) "ATP binding (20.2%) GTP binding (20.2%) ATP hydrolysis activity (20.2%)" "IPR004396 (10.1%) IPR006073 (10.1%) IPR012675 (10.1%)" "Ribosome-binding ATPase YchF/Obg-like ATPase 1 (10.1%) GTP binding domain (10.1%) Beta-grasp domain superfamily (10.1%)" MKELINRLEELNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.-.-.- (100%) Ligases (100%) GO:0015977 (24.4%) GO:0009317 (24.4%) "GO:0003989 (24.4%) GO:0004658 (24.4%) GO:0016740 (2.6%)" carbon fixation (24.4%) acetyl-CoA carboxylase complex (24.4%) "acetyl-CoA carboxylase activity (24.4%) propionyl-CoA carboxylase activity (24.4%) transferase activity (2.6%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" GKVNPTVYAMEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.4.-.- (50%) 2.4.1.250 (33.3%) 2.4.1.301 (16.7%)" "Glycosyltransferases (50%) D-inositol-3-phosphate glycosyltransferase (33.3%) 2'-deamino-2'-hydroxyneamine 1-alpha-D-kanosaminyltransferase (16.7%)" "GO:0016757 (66.7%) GO:0016758 (27.3%) GO:0102710 (6.1%)" "glycosyltransferase activity (66.7%) hexosyltransferase activity (27.3%) D-inositol-3-phosphate glycosyltransferase activity (6.1%)" "IPR001296 (33.3%) IPR028098 (33.3%) IPR050194 (33.3%)" "Glycosyl transferase, family 1 (33.3%) Glycosyltransferase subfamily 4-like, N-terminal domain (33.3%) Glycosyltransferase group 1 (33.3%)" QIYVQVIDDLSGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR004389 (34.1%) IPR005484 (34.1%) IPR057268 (31.8%)" "Large ribosomal subunit protein uL18, bacteria (34.1%) Large ribosomal subunit protein uL18, bacterial/plantae/animalia (34.1%) Large ribosomal subunit protein uL18 (31.8%)" YLEYPEFEEYIAKR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) GO:0042777 (24.7%) "GO:0005524 (24.7%) GO:0046933 (24.7%) GO:0046961 (24.7%)" proton motive force-driven plasma membrane ATP synthesis (24.7%) "ATP binding (24.7%) proton-transporting ATP synthase activity, rotational mechanism (24.7%) proton-transporting ATPase activity, rotational mechanism (24.7%)" "IPR000194 (14%) IPR004100 (14%) IPR020003 (14%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (14%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (14%)" VAALEGDVLGSYQHGAR root GO:0006414 (0.5%) "GO:0005737 (46.7%) GO:0005739 (0.5%) GO:0005829 (0.5%)" "GO:0003746 (49.7%) GO:0005085 (0.5%) GO:0008270 (0.5%)" translational elongation (0.5%) "cytoplasm (46.7%) mitochondrion (0.5%) cytosol (0.5%)" "translation elongation factor activity (49.7%) guanyl-nucleotide exchange factor activity (0.5%) zinc ion binding (0.5%)" "IPR001816 (20.1%) IPR014039 (20.1%) IPR018101 (20.1%)" "Translation elongation factor EFTs/EF1B (20.1%) Translation elongation factor EFTs/EF1B, dimerisation (20.1%) Translation elongation factor Ts, conserved site (20.1%)" GTPTQPGIESPYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.18 (100%) glutamine--tRNA ligase (100%) "GO:0006425 (24.2%) GO:0006424 (3.3%)" GO:0005829 (24.2%) "GO:0004819 (24.2%) GO:0005524 (24.2%)" "glutaminyl-tRNA aminoacylation (24.2%) glutamyl-tRNA aminoacylation (3.3%)" cytosol (24.2%) "glutamine-tRNA ligase activity (24.2%) ATP binding (24.2%)" "IPR000924 (10.3%) IPR004514 (10.3%) IPR011035 (10.3%)" "Glutamyl/glutaminyl-tRNA synthetase (10.3%) Glutamine-tRNA synthetase (10.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (10.3%)" MMTIDKFNFAGKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" NALCVHLTYVPYLAAAGELK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.8%) GO:0044210 (11.5%) GO:0006241 (0.5%)" "GO:0005829 (11.8%) GO:0097268 (11.3%)" "GO:0003883 (11.8%) GO:0005524 (11.8%) GO:0042802 (11.8%)" "pyrimidine nucleobase biosynthetic process (11.8%) 'de novo' CTP biosynthetic process (11.5%) CTP biosynthetic process (0.5%)" "cytosol (11.8%) cytoophidium (11.3%)" "CTP synthase activity (11.8%) ATP binding (11.8%) identical protein binding (11.8%)" "IPR004468 (16.9%) IPR017456 (16.9%) IPR027417 (16.9%)" "CTP synthase (16.9%) CTP synthase, N-terminal (16.9%) P-loop containing nucleoside triphosphate hydrolase (16.9%)" IENTEPEYNNYDIRPLLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.13.11.24 (100%) quercetin 2,3-dioxygenase (100%) "GO:0046872 (85%) GO:0008127 (15%)" "metal ion binding (85%) quercetin 2,3-dioxygenase activity (15%)" "IPR003829 (20%) IPR011051 (20%) IPR012093 (20%)" "Pirin, N-terminal domain (20%) RmlC-like cupin domain superfamily (20%) Pirin (20%)" TATAQQLEYLK root 2.4.2.7 (100%) adenine phosphoribosyltransferase (100%) "GO:0006166 (17%) GO:0006168 (16.6%) GO:0044209 (16.5%)" "GO:0005829 (9.6%) GO:0005737 (7.4%)" "GO:0003999 (17.3%) GO:0002055 (7.4%) GO:0016208 (7.4%)" "purine ribonucleoside salvage (17%) adenine salvage (16.6%) AMP salvage (16.5%)" "cytosol (9.6%) cytoplasm (7.4%)" "adenine phosphoribosyltransferase activity (17.3%) adenine binding (7.4%) AMP binding (7.4%)" "IPR029057 (25.7%) IPR000836 (24.8%) IPR005764 (24.3%)" "Phosphoribosyltransferase-like (25.7%) Phosphoribosyltransferase domain (24.8%) Adenine phosphoribosyl transferase (24.3%)" VWDAEQLEEGVIR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (20%) IPR011013 (20%) IPR014718 (20%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (20%) Galactose mutarotase-like domain superfamily (20%) Glycoside hydrolase-type carbohydrate-binding (20%)" MINTSTSDENLCGLKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (20%) IPR011013 (20%) IPR014718 (20%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (20%) Galactose mutarotase-like domain superfamily (20%) Glycoside hydrolase-type carbohydrate-binding (20%)" KLPSEVLLAEEAIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.4.3 (100%) guanine deaminase (100%) GO:0006152 (32.4%) "GO:0047974 (32.4%) GO:0008270 (29.7%) GO:0008892 (5.4%)" purine nucleoside catabolic process (32.4%) "guanosine deaminase activity (32.4%) zinc ion binding (29.7%) guanine deaminase activity (5.4%)" "IPR002125 (34.3%) IPR016193 (34.3%) IPR016192 (31.4%)" "Cytidine and deoxycytidylate deaminase domain (34.3%) Cytidine deaminase-like (34.3%) APOBEC/CMP deaminase, zinc-binding (31.4%)" TVYDPEIPVNVYDLGLIYKVDIDEEKNVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR002744 (33.3%) IPR034904 (33.3%) IPR052339 (33.3%)" "MIP18 family-like (33.3%) Fe-S cluster assembly domain superfamily (33.3%) Iron-Sulfur Protein Maturation MIP18 (33.3%)" SSEPLVGAYASVSDINK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR027304 (33.3%) IPR046357 (33.3%) IPR052029 (33.3%)" "Trigger factor/SurA domain superfamily (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) Periplasmic chaperone PpiD (33.3%)" YQLGEAVDFANIDKAPEERER Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (16.1%) "GO:0003746 (23.4%) GO:0003924 (23.4%) GO:0005525 (23.4%)" cytosol (16.1%) "translation elongation factor activity (23.4%) GTPase activity (23.4%) GTP binding (23.4%)" "IPR000795 (10.4%) IPR027417 (10.4%) IPR031157 (10.4%)" "Translational (tr)-type GTP-binding domain (10.4%) P-loop containing nucleoside triphosphate hydrolase (10.4%) Tr-type G domain, conserved site (10.4%)" TKYLGDGIVTGYGTIDGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0015977 (22.9%) GO:0009317 (22.9%) "GO:0003989 (22.9%) GO:0004658 (22.9%) GO:0016740 (8.3%)" carbon fixation (22.9%) acetyl-CoA carboxylase complex (22.9%) "acetyl-CoA carboxylase activity (22.9%) propionyl-CoA carboxylase activity (22.9%) transferase activity (8.3%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" GANVTVPFKEEAFAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.1.1.25 (100%) shikimate dehydrogenase (NADP(+)) (100%) "GO:0008652 (14.2%) GO:0009073 (14.2%) GO:0009423 (14.2%)" GO:0005829 (14.2%) "GO:0004764 (14.2%) GO:0050661 (14.2%) GO:0016491 (0.3%)" "amino acid biosynthetic process (14.2%) aromatic amino acid family biosynthetic process (14.2%) chorismate biosynthetic process (14.2%)" cytosol (14.2%) "shikimate 3-dehydrogenase (NADP+) activity (14.2%) NADP binding (14.2%) oxidoreductase activity (0.3%)" "IPR013708 (14.6%) IPR022893 (14.6%) IPR046346 (14.6%)" "Shikimate dehydrogenase substrate binding, N-terminal (14.6%) Shikimate dehydrogenase family (14.6%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (14.6%)" MGIAPQQMLFVGDSR root "3.1.3.18 (99.2%) 6.1.1.2 (0.8%)" "phosphoglycolate phosphatase (99.2%) tryptophan--tRNA ligase (0.8%)" "GO:0006281 (16.7%) GO:0005975 (16.4%) GO:0046295 (15.5%)" GO:0005829 (16.8%) "GO:0008967 (16.8%) GO:0046872 (16.5%) GO:0016787 (0.4%)" "DNA repair (16.7%) carbohydrate metabolic process (16.4%) glycolate biosynthetic process (15.5%)" cytosol (16.8%) "phosphoglycolate phosphatase activity (16.8%) metal ion binding (16.5%) hydrolase activity (0.4%)" "IPR023214 (16.4%) IPR036412 (16.4%) IPR006439 (16.3%)" "HAD superfamily (16.4%) HAD-like superfamily (16.4%) HAD hydrolase, subfamily IA (16.3%)" RPPITVFDDFWKK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 6.3.1.5 (100%) NAD(+) synthase (100%) "GO:0009435 (14.4%) GO:0006974 (0.1%) GO:0034355 (0.1%)" "GO:0005737 (14.3%) GO:0005829 (0.1%)" "GO:0003952 (14.3%) GO:0004359 (14.3%) GO:0005524 (14.3%)" "NAD+ biosynthetic process (14.4%) DNA damage response (0.1%) NAD+ biosynthetic process via the salvage pathway (0.1%)" "cytoplasm (14.3%) cytosol (0.1%)" "NAD+ synthase (glutamine-hydrolyzing) activity (14.3%) glutaminase activity (14.3%) ATP binding (14.3%)" "IPR014729 (25.4%) IPR022310 (25.4%) IPR003694 (25.2%)" "Rossmann-like alpha/beta/alpha sandwich fold (25.4%) NAD/GMP synthase (25.4%) NAD(+) synthetase (25.2%)" VAANAEESGYK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR027304 (33.3%) IPR046357 (33.3%) IPR052029 (33.3%)" "Trigger factor/SurA domain superfamily (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) Periplasmic chaperone PpiD (33.3%)" SVDGIQVGEGR root "2.6.1.42 (99.6%) 4.1.3.38 (0.4%)" "branched-chain-amino-acid transaminase (99.6%) aminodeoxychorismate lyase (0.4%)" "GO:0006532 (15.5%) GO:0009098 (15.5%) GO:0009099 (15.5%)" GO:0005829 (15.5%) "GO:0004084 (11.3%) GO:0052654 (4.3%) GO:0052655 (4.3%)" "aspartate biosynthetic process (15.5%) L-leucine biosynthetic process (15.5%) L-valine biosynthetic process (15.5%)" cytosol (15.5%) "branched-chain-amino-acid transaminase activity (11.3%) L-leucine-2-oxoglutarate transaminase activity (4.3%) L-valine-2-oxoglutarate transaminase activity (4.3%)" "IPR036038 (12.7%) IPR043132 (12.7%) IPR001544 (12.6%)" "Aminotransferase-like, PLP-dependent enzymes (12.7%) Branched-chain-amino-acid aminotransferase-like, C-terminal (12.7%) Aminotransferase class IV (12.6%)" IIDIAISELSTITGQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (16.7%) "GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "ribosome (16.7%) ribonucleoprotein complex (16.7%)" "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR002132 (20%) IPR020930 (20%) IPR022803 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5, bacteria (20%) Large ribosomal subunit protein uL5 domain superfamily (20%)" DALVGIALFLTHLAK Bacteroidota Bacteria Pseudomonadati Bacteroidota "5.4.2.10 (87.8%) 5.4.2.8 (8.8%) 5.4.2.2 (3.4%)" "phosphoglucosamine mutase (87.8%) phosphomannomutase (8.8%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (3.4%)" "GO:0005975 (14.3%) GO:0006048 (14.2%) GO:0009252 (14.2%)" GO:0005829 (14.2%) "GO:0004615 (14.2%) GO:0008966 (14.2%) GO:0000287 (14.1%)" "carbohydrate metabolic process (14.3%) UDP-N-acetylglucosamine biosynthetic process (14.2%) peptidoglycan biosynthetic process (14.2%)" cytosol (14.2%) "phosphomannomutase activity (14.2%) phosphoglucosamine mutase activity (14.2%) magnesium ion binding (14.1%)" "IPR005845 (10.1%) IPR005846 (10.1%) IPR016055 (10.1%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (10.1%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (10.1%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (10.1%)" LENIPIVPLYFAK Pseudomonadati Bacteria Pseudomonadati 2.7.7.4 (100%) sulfate adenylyltransferase (100%) "GO:0000103 (25.3%) GO:0070814 (23.4%)" "GO:0005524 (25.5%) GO:0004781 (25.3%) GO:0016779 (0.4%)" "sulfate assimilation (25.3%) hydrogen sulfide biosynthetic process (23.4%)" "ATP binding (25.5%) sulfate adenylyltransferase (ATP) activity (25.3%) nucleotidyltransferase activity (0.4%)" "IPR002500 (24.9%) IPR014729 (24.9%) IPR050128 (24.9%)" "Phosphoadenosine phosphosulphate reductase domain (24.9%) Rossmann-like alpha/beta/alpha sandwich fold (24.9%) Sulfate adenylyltransferase subunit 2 (24.9%)" ACEEAAEGQVVSPVNFNSPGQVVIAGHKEAVER root "2.3.1.39 (99.3%) 2.3.1.180 (0.7%)" "[acyl-carrier-protein] S-malonyltransferase (99.3%) beta-ketoacyl-[acyl-carrier-protein] synthase III (0.7%)" GO:0006633 (33%) GO:0005829 (32.8%) "GO:0004314 (33%) GO:0016746 (0.9%) GO:0004315 (0.2%)" fatty acid biosynthetic process (33%) cytosol (32.8%) "[acyl-carrier-protein] S-malonyltransferase activity (33%) acyltransferase activity (0.9%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (0.2%)" "IPR001227 (14.4%) IPR014043 (14.4%) IPR016035 (14.4%)" "Acyl transferase domain superfamily (14.4%) Acyl transferase domain (14.4%) Acyl transferase/acyl hydrolase/lysophospholipase (14.4%)" ELIENIASLVNDKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (12.9%) GO:0006261 (11.1%)" "GO:0005737 (12.9%) GO:0009330 (12.9%) GO:0005694 (11.5%)" "GO:0003677 (12.9%) GO:0005524 (12.9%) GO:0034335 (11.1%)" "DNA topological change (12.9%) DNA-templated DNA replication (11.1%)" "cytoplasm (12.9%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.9%) chromosome (11.5%)" "DNA binding (12.9%) ATP binding (12.9%) DNA negative supercoiling activity (11.1%)" "IPR002205 (12.9%) IPR006691 (12.9%) IPR050220 (12.9%)" "DNA topoisomerase, type IIA, domain A (12.9%) DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.9%) Type II DNA Topoisomerases (12.9%)" GMTEAEAVKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis ALQQVVEGAVNQMWTITALQLHPK GEYQYCSPNDHVNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.9%) GO:0006531 (24.9%)" GO:0005829 (24.9%) "GO:0008797 (24.9%) GO:0016853 (0.4%)" "tricarboxylic acid cycle (24.9%) aspartate metabolic process (24.9%)" cytosol (24.9%) "aspartate ammonia-lyase activity (24.9%) isomerase activity (0.4%)" "IPR000362 (13.5%) IPR008948 (13.5%) IPR018951 (13.5%)" "Fumarate lyase family (13.5%) L-Aspartase-like (13.5%) Fumarase C, C-terminal (13.5%)" AQPDWSIALLR Bacteria Bacteria "5.1.3.2 (99.5%) 5.1.3.7 (0.5%)" "UDP-glucose 4-epimerase (99.5%) UDP-N-acetylglucosamine 4-epimerase (0.5%)" "GO:0006012 (32.4%) GO:0005996 (0.4%) GO:0005975 (0.2%)" "GO:0005829 (32.5%) GO:0005737 (0.2%)" "GO:0003978 (32.5%) GO:0016853 (0.9%) GO:0016857 (0.2%)" "galactose metabolic process (32.4%) monosaccharide metabolic process (0.4%) carbohydrate metabolic process (0.2%)" "cytosol (32.5%) cytoplasm (0.2%)" "UDP-glucose 4-epimerase activity (32.5%) isomerase activity (0.9%) racemase and epimerase activity, acting on carbohydrates and derivatives (0.2%)" "IPR036291 (33.8%) IPR005886 (32.4%) IPR001509 (30.9%)" "NAD(P)-binding domain superfamily (33.8%) UDP-glucose 4-epimerase (32.4%) NAD-dependent epimerase/dehydratase (30.9%)" TLDVSVVDLTVNLAK Bacteria Bacteria "1.2.1.- (95.4%) 1.2.1.12 (4.6%)" "With NAD(+) or NADP(+) as acceptor (95.4%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (4.6%)" "GO:0006006 (23.9%) GO:0006096 (3.1%)" "GO:0005737 (0.2%) GO:0005829 (0.1%)" "GO:0051287 (24%) GO:0050661 (23.9%) GO:0004365 (12.4%)" "glucose metabolic process (23.9%) glycolytic process (3.1%)" "cytoplasm (0.2%) cytosol (0.1%)" "NAD binding (24%) NADP binding (23.9%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (12.4%)" "IPR020829 (17%) IPR020831 (17%) IPR020830 (16.7%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17%) Glyceraldehyde 3-phosphate dehydrogenase, active site (16.7%)" AVSMARPYNAK root GO:0006950 (0.3%) "GO:0005737 (99.2%) GO:0016020 (0.2%)" "GO:0042802 (0.2%) GO:0042803 (0.2%)" response to stress (0.3%) "cytoplasm (99.2%) membrane (0.2%)" "identical protein binding (0.2%) protein homodimerization activity (0.2%)" "IPR014729 (33.8%) IPR006016 (33.8%) IPR006015 (32.4%)" "Rossmann-like alpha/beta/alpha sandwich fold (33.8%) UspA (33.8%) Universal stress protein A family (32.4%)" SLLNGVLVQDRDLNIETTADLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (24.6%) GO:0005829 (24.6%) "GO:0003937 (24.6%) GO:0004643 (24.6%) GO:0016740 (1.4%)" 'de novo' IMP biosynthetic process (24.6%) cytosol (24.6%) "IMP cyclohydrolase activity (24.6%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (24.6%) transferase activity (1.4%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" GYRPQFYFR root "3.6.5.3 (100%) 1.97.1.4 (0%)" "protein-synthesizing GTPase (100%) [formate-C-acetyltransferase]-activating enzyme (0%)" "GO:0006414 (0%) GO:0070125 (0%) GO:0032790 (0%)" "GO:0005829 (16.8%) GO:0032045 (9.6%) GO:0005737 (0.5%)" "GO:0003746 (17.7%) GO:0005525 (17.6%) GO:0003924 (14.2%)" "translational elongation (0%) mitochondrial translational elongation (0%) ribosome disassembly (0%)" "cytosol (16.8%) guanyl-nucleotide exchange factor complex (9.6%) cytoplasm (0.5%)" "translation elongation factor activity (17.7%) GTP binding (17.6%) GTPase activity (14.2%)" "IPR004160 (9.8%) IPR050055 (9.7%) IPR009001 (9.7%)" "Translation elongation factor EFTu/EF1A, C-terminal (9.8%) Elongation factor Tu GTPase (9.7%) Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (9.7%)" FVNILMVDGK root "GO:0006412 (19.9%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0015935 (19.5%) GO:0005840 (0.6%) GO:1990904 (0.3%)" "GO:0003735 (19.9%) GO:0019843 (19.6%) GO:0000049 (19.4%)" "translation (19.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "small ribosomal subunit (19.5%) ribosome (0.6%) ribonucleoprotein complex (0.3%)" "structural constituent of ribosome (19.9%) rRNA binding (19.6%) tRNA binding (19.4%)" "IPR023798 (20.2%) IPR036823 (20.2%) IPR000235 (19.9%)" "Small ribosomal subunit protein uS7 domain (20.2%) Small ribosomal subunit protein uS7 domain superfamily (20.2%) Small ribosomal subunit protein uS7 (19.9%)" LFQMHSNKQNPVEVIGAGDIGAGVGFKDIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.3%) GO:0005737 (18.8%) "GO:0003746 (20.3%) GO:0003924 (20.3%) GO:0005525 (20.3%)" ribosome disassembly (20.3%) cytoplasm (18.8%) "translation elongation factor activity (20.3%) GTPase activity (20.3%) GTP binding (20.3%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" EAPAAPAAQAPVKPAQPAQAPTEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.3%) IPR000795 (8.3%) IPR004161 (8.3%)" "Translation initiation factor IF-2, bacterial-like (8.3%) Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" FHLALDRPDPAADAAGVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "7.2.1.1 (99.5%) 1.6.5.- (0.5%)" "NADH:ubiquinone reductase (Na(+)-transporting) (99.5%) With a quinone or similar compound as acceptor (0.5%)" GO:0006814 (16.7%) "GO:0005886 (16.5%) GO:0016020 (0.2%)" "GO:0016655 (16.7%) GO:0051537 (16.7%) GO:0046872 (16.5%)" sodium ion transport (16.7%) "plasma membrane (16.5%) membrane (0.2%)" "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (16.7%) 2 iron, 2 sulfur cluster binding (16.7%) metal ion binding (16.5%)" "IPR001433 (10.2%) IPR039261 (10.2%) IPR008333 (10.1%)" "Oxidoreductase FAD/NAD(P)-binding (10.2%) Ferredoxin-NADP reductase (FNR), nucleotide-binding domain (10.2%) Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain (10.1%)" TGTSDYNMGLSEKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (33.3%) "GO:0015288 (33.3%) GO:0030247 (33.3%)" cell outer membrane (33.3%) "porin activity (33.3%) polysaccharide binding (33.3%)" "IPR006665 (25%) IPR006690 (25%) IPR036737 (25%)" "OmpA-like domain (25%) Outer membrane protein, OmpA-like, conserved site (25%) OmpA-like domain superfamily (25%)" KTSEYGVMLAEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0042274 (20.1%) GO:0006412 (19.7%)" "GO:0015935 (19.7%) GO:1990904 (0.4%)" "GO:0003735 (20.1%) GO:0019843 (20.1%)" "ribosomal small subunit biogenesis (20.1%) translation (19.7%)" "small ribosomal subunit (19.7%) ribonucleoprotein complex (0.4%)" "structural constituent of ribosome (20.1%) rRNA binding (20.1%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" MRNFDLSPLYR root "GO:0050821 (49.7%) GO:0009408 (0.1%) GO:0017148 (0.1%)" "GO:0005737 (49.7%) GO:0005829 (0.1%)" "GO:0042802 (0.1%) GO:0042803 (0.1%) GO:0048027 (0.1%)" "protein stabilization (49.7%) response to heat (0.1%) negative regulation of translation (0.1%)" "cytoplasm (49.7%) cytosol (0.1%)" "identical protein binding (0.1%) protein homodimerization activity (0.1%) mRNA 5'-UTR binding (0.1%)" "IPR002068 (25.1%) IPR008978 (25.1%) IPR037913 (25.1%)" "Alpha crystallin/Hsp20 domain (25.1%) HSP20-like chaperone (25.1%) Small heat shock protein IbpA/IbpB, ACD domain (25.1%)" TSSFTVEPSDAPLYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) TTVEPHIGQVSYFK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae GO:0032790 (25.2%) "GO:0003746 (25.2%) GO:0005525 (25.2%) GO:0003924 (24.3%)" ribosome disassembly (25.2%) "translation elongation factor activity (25.2%) GTP binding (25.2%) GTPase activity (24.3%)" "IPR000640 (7.7%) IPR005517 (7.7%) IPR009000 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translation elongation factor EFG/EF2, domain IV (7.7%) Translation protein, beta-barrel domain superfamily (7.7%)" ITFPDNSVR root 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.1%) "GO:0005829 (9.6%) GO:0005737 (6.5%)" "GO:0000049 (16.1%) GO:0004829 (16.1%) GO:0005524 (16.1%)" threonyl-tRNA aminoacylation (16.1%) "cytosol (9.6%) cytoplasm (6.5%)" "tRNA binding (16.1%) threonine-tRNA ligase activity (16.1%) ATP binding (16.1%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" IINEPTAAALAYGLDKKNQNMK FTGWYDVDLSEK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "5.4.2.11 (99.2%) 5.4.2.- (0.6%) 5.4.2.1 (0.1%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (99.2%) Phosphotransferases (phosphomutases) (0.6%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.1%)" "GO:0006094 (33.1%) GO:0006096 (33.1%) GO:0061621 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004619 (33%) GO:0016853 (0.3%) GO:0016868 (0.1%)" "gluconeogenesis (33.1%) glycolytic process (33.1%) canonical glycolysis (0%)" "cytoplasm (0%) cytosol (0%)" "phosphoglycerate mutase activity (33%) isomerase activity (0.3%) intramolecular phosphotransferase activity (0.1%)" "IPR005952 (25%) IPR013078 (25%) IPR029033 (25%)" "Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%) Histidine phosphatase superfamily (25%)" YKPNFTPHVDCGDNVIIINADKVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (19.9%) GO:0017148 (19.9%)" "GO:0022625 (19.9%) GO:0005840 (0.4%)" "GO:0003729 (19.9%) GO:0003735 (19.9%)" "translation (19.9%) negative regulation of translation (19.9%)" "cytosolic large ribosomal subunit (19.9%) ribosome (0.4%)" "mRNA binding (19.9%) structural constituent of ribosome (19.9%)" "IPR005822 (25.2%) IPR005823 (25.2%) IPR036899 (25.2%)" "Large ribosomal subunit protein uL13 (25.2%) Large ribosomal subunit protein uL13, bacteria (25.2%) Large ribosomal subunit protein uL13 superfamily (25.2%)" TIFETVISIENPEHTLQVPSDSENLDGLNFLAGKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.1%) GO:0006096 (14.1%) GO:0051156 (14.1%)" GO:0005829 (14.1%) "GO:0004347 (14.1%) GO:0048029 (14.1%) GO:0097367 (14.1%)" "gluconeogenesis (14.1%) glycolytic process (14.1%) glucose 6-phosphate metabolic process (14.1%)" cytosol (14.1%) "glucose-6-phosphate isomerase activity (14.1%) monosaccharide binding (14.1%) carbohydrate derivative binding (14.1%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" VKEPIASEYPLVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.1.1 (100%) alanine dehydrogenase (100%) GO:0042853 (25%) GO:0005886 (25%) "GO:0000166 (25%) GO:0000286 (25%)" L-alanine catabolic process (25%) plasma membrane (25%) "nucleotide binding (25%) alanine dehydrogenase activity (25%)" "IPR007698 (16.7%) IPR007886 (16.7%) IPR008141 (16.7%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (16.7%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (16.7%) Alanine dehydrogenase (16.7%)" SHQTEETTAFIDNLRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.3.7 (100%) 3'(2'),5'-bisphosphate nucleotidase (100%) "GO:0000103 (20%) GO:0050427 (20%)" GO:0005886 (20%) "GO:0000287 (20%) GO:0008441 (20%)" "sulfate assimilation (20%) 3'-phosphoadenosine 5'-phosphosulfate metabolic process (20%)" plasma membrane (20%) "magnesium ion binding (20%) 3'(2'),5'-bisphosphate nucleotidase activity (20%)" "IPR000760 (25%) IPR006240 (25%) IPR020583 (25%)" "Inositol monophosphatase-like (25%) 3'(2'),5'-bisphosphate nucleotidase CysQ (25%) Inositol monophosphatase, metal-binding site (25%)" IKEVDVFEGLGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0000027 (10%) GO:0009409 (10%) GO:0010467 (10%)" "GO:0005829 (10%) GO:1990904 (10%)" "GO:0000049 (10%) GO:0003924 (10%) GO:0005525 (10%)" "ribosomal large subunit assembly (10%) response to cold (10%) gene expression (10%)" "cytosol (10%) ribonucleoprotein complex (10%)" "tRNA binding (10%) GTPase activity (10%) GTP binding (10%)" "IPR000640 (6.7%) IPR000795 (6.7%) IPR004161 (6.7%)" "Elongation factor EFG, domain V-like (6.7%) Translational (tr)-type GTP-binding domain (6.7%) Translation elongation factor EFTu-like, domain 2 (6.7%)" SGGFTCSHLR Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.2.7.1 (75.5%) 1.2.7.- (19.8%) 1.2.1.51 (4.7%)" "pyruvate synthase (75.5%) With an iron-sulfur protein as acceptor (19.8%) pyruvate dehydrogenase (NADP(+)) (4.7%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (11.9%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.4%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (11.9%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.4%)" "IPR019752 (7.8%) IPR050722 (7.8%) IPR011895 (7.8%)" "Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%) Pyruvate-flavodoxin oxidoreductase (7.8%)" KMLAEELKQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20%) "GO:0005840 (20.2%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20.2%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000244 (14.3%) IPR009027 (14.3%) IPR020069 (14.3%)" "Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.3%) Large ribosomal subunit protein bL9, C-terminal (14.3%)" FTDGIDFTTCDIAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006879 (20%) GO:0005829 (20%) "GO:0004322 (20%) GO:0008199 (20%) GO:0020037 (20%)" intracellular iron ion homeostasis (20%) cytosol (20%) "ferroxidase activity (20%) ferric iron binding (20%) heme binding (20%)" "IPR008331 (16.7%) IPR009040 (16.7%) IPR009078 (16.7%)" "Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%) Ferritin-like superfamily (16.7%)" STEERDESQPRPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" FGISGDKGGTHLWWDNADKGNF Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" TNSAAQAQILAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" ARDAAEESIEDIKTLLNDGTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0000917 (14.5%) GO:0043093 (13.6%) GO:0051258 (13.6%)" "GO:0005737 (14.5%) GO:0032153 (14.5%)" "GO:0003924 (14.5%) GO:0005525 (14.5%)" "division septum assembly (14.5%) FtsZ-dependent cytokinesis (13.6%) protein polymerization (13.6%)" "cytoplasm (14.5%) cell division site (14.5%)" "GTPase activity (14.5%) GTP binding (14.5%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" EMTPEIVEGISNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" QIIVDEEIACPISGTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.4%) GO:0015966 (12.4%)" "GO:0005737 (12.4%) GO:0070062 (12.4%) GO:1990742 (12.4%)" "GO:0004081 (12.4%) GO:0004820 (12.4%) GO:0005524 (12.4%)" "glycyl-tRNA aminoacylation (12.4%) diadenosine tetraphosphate biosynthetic process (12.4%)" "cytoplasm (12.4%) extracellular exosome (12.4%) microvesicle (12.4%)" "bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.4%) glycine-tRNA ligase activity (12.4%) ATP binding (12.4%)" "IPR002314 (11.1%) IPR002315 (11.1%) IPR004154 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Glycyl-tRNA synthetase (11.1%) Anticodon-binding (11.1%)" IAVESYDDRIDPVGACVGVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006353 (19.6%) GO:0031564 (19.6%)" GO:0005829 (19.6%) "GO:0003723 (19.6%) GO:0003700 (19.2%) GO:0003746 (2%)" "DNA-templated transcription termination (19.6%) transcription antitermination (19.6%)" cytosol (19.6%) "RNA binding (19.6%) DNA-binding transcription factor activity (19.2%) translation elongation factor activity (2%)" "IPR009019 (12.2%) IPR015946 (12.2%) IPR025249 (12.2%)" "K homology domain superfamily, prokaryotic type (12.2%) K homology domain-like, alpha/beta (12.2%) Transcription factor NusA, first KH domain (12.2%)" HSDDISLNPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.4.15.5 (66.7%) 3.4.-.- (33.3%)" "peptidyl-dipeptidase Dcp (66.7%) Acting on peptide bonds (peptidases) (33.3%)" GO:0006508 (19.7%) GO:0005829 (19.7%) "GO:0004180 (19.7%) GO:0004222 (19.7%) GO:0046872 (19.7%)" proteolysis (19.7%) cytosol (19.7%) "carboxypeptidase activity (19.7%) metalloendopeptidase activity (19.7%) metal ion binding (19.7%)" "IPR001567 (18.4%) IPR024077 (18.4%) IPR024079 (18.4%)" "Peptidase M3A/M3B catalytic domain (18.4%) Neurolysin/Thimet oligopeptidase, domain 2 (18.4%) Metallopeptidase, catalytic domain superfamily (18.4%)" GIEDGTWYQGTSKYEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (73.3%) 1.2.7.- (26.7%)" "pyruvate synthase (73.3%) With an iron-sulfur protein as acceptor (26.7%)" "GO:0006979 (14.8%) GO:0022900 (14.8%) GO:0044281 (11.1%)" "GO:0005506 (14.8%) GO:0030976 (14.8%) GO:0051539 (14.8%)" "response to oxidative stress (14.8%) electron transport chain (14.8%) small molecule metabolic process (11.1%)" "iron ion binding (14.8%) thiamine pyrophosphate binding (14.8%) 4 iron, 4 sulfur cluster binding (14.8%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" MDADVPLVVPEVNAADAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.3%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.3%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR036291 (18.5%) IPR000534 (18.1%) IPR005986 (18.1%)" "NAD(P)-binding domain superfamily (18.5%) Semialdehyde dehydrogenase, NAD-binding (18.1%) Aspartate-semialdehyde dehydrogenase, beta-type (18.1%)" IVSWYDNEWGYSNKVCEMAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.1.- (93.8%) 1.2.1.12 (6.3%)" "With NAD(+) or NADP(+) as acceptor (93.8%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (6.3%)" "GO:0006006 (16.5%) GO:0006096 (16.5%)" GO:0005737 (16.5%) "GO:0050661 (16.5%) GO:0051287 (16.5%) GO:0004365 (8.8%)" "glucose metabolic process (16.5%) glycolytic process (16.5%)" cytoplasm (16.5%) "NADP binding (16.5%) NAD binding (16.5%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (8.8%)" "IPR020829 (17.4%) IPR020831 (17.4%) IPR006424 (16.3%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.4%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.4%) Glyceraldehyde-3-phosphate dehydrogenase, type I (16.3%)" KLGIHAYGNVGR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "1.1.1.95 (70.2%) 1.1.1.290 (19.1%) 1.1.1.81 (10.6%)" "phosphoglycerate dehydrogenase (70.2%) 4-phosphoerythronate dehydrogenase (19.1%) hydroxypyruvate reductase (10.6%)" GO:0006564 (0.2%) "GO:0051287 (48.9%) GO:0016616 (38.4%) GO:0004617 (8%)" L-serine biosynthetic process (0.2%) "NAD binding (48.9%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (38.4%) phosphoglycerate dehydrogenase activity (8%)" "IPR036291 (33.5%) IPR006139 (33.2%) IPR006140 (33.1%)" "NAD(P)-binding domain superfamily (33.5%) D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.2%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.1%)" YAGQDKVNPGSIILSAEMMLR root "1.1.1.42 (99.9%) 1.1.1.- (0.1%) 1.1.1.41 (0.1%)" "isocitrate dehydrogenase (NADP(+)) (99.9%) With NAD(+) or NADP(+) as acceptor (0.1%) isocitrate dehydrogenase (NAD(+)) (0.1%)" "GO:0006099 (20.1%) GO:0006097 (19.8%) GO:0006979 (0%)" "GO:0005576 (0%) GO:0005737 (0%) GO:0005829 (0%)" "GO:0004450 (20.1%) GO:0000287 (19.8%) GO:0051287 (19.8%)" "tricarboxylic acid cycle (20.1%) glyoxylate cycle (19.8%) response to oxidative stress (0%)" "extracellular region (0%) cytoplasm (0%) cytosol (0%)" "isocitrate dehydrogenase (NADP+) activity (20.1%) magnesium ion binding (19.8%) NAD binding (19.8%)" "IPR004439 (33.5%) IPR024084 (33.5%) IPR019818 (33%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (33.5%) Isopropylmalate dehydrogenase-like domain (33.5%) Isocitrate/isopropylmalate dehydrogenase, conserved site (33%)" NYELIDNEEKHQYEFHVEGYVPR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016740 (100%) transferase activity (100%) "IPR016181 (33.3%) IPR031165 (33.3%) IPR045057 (33.3%)" "Acyl-CoA N-acyltransferase (33.3%) Yjdj-type Gcn5-related N-acetyltransferase (33.3%) Gcn5-related N-acetyltransferase (33.3%)" IKVNLSKDDKSATGTPNNDAYQEIR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) GO:0017004 (25.4%) GO:0030313 (25.4%) "GO:0016209 (23.9%) GO:0016491 (23.9%) GO:0004601 (1.4%)" cytochrome complex assembly (25.4%) cell envelope (25.4%) "antioxidant activity (23.9%) oxidoreductase activity (23.9%) peroxidase activity (1.4%)" "IPR000866 (16.7%) IPR013766 (16.7%) IPR017937 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Thioredoxin, conserved site (16.7%)" ATLFDPNAVDWK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0019867 (50%) GO:2001070 (50%) outer membrane (50%) starch binding (50%) "IPR025970 (50%) IPR032187 (50%)" "SusE outer membrane protein (50%) Outer membrane protein SusF/SusE-like, C-terminal (50%)" ATIDSKIPEGALAEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (17%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (17%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" VLGNGSLANKLEVEAHAFSK QVANGVVDAFVHTVEQYVTKPVDAK Bacteria Bacteria "1.1.1.- (64.3%) 1.1.1.2 (25%) 1.1.1.1 (7.1%)" "With NAD(+) or NADP(+) as acceptor (64.3%) alcohol dehydrogenase (NADP(+)) (25%) alcohol dehydrogenase (7.1%)" GO:0000302 (0.2%) GO:0005829 (19.7%) "GO:1990362 (19.9%) GO:0008106 (19.7%) GO:1990002 (19.7%)" response to reactive oxygen species (0.2%) cytosol (19.7%) "butanol dehydrogenase (NAD+) activity (19.9%) alcohol dehydrogenase (NADP+) activity (19.7%) methylglyoxal reductase (NADPH) (acetol producing) activity (19.7%)" "IPR044731 (25.3%) IPR018211 (25.1%) IPR056798 (25%)" "Butanol dehydrogenase-like (25.3%) Alcohol dehydrogenase, iron-type, conserved site (25.1%) Fe-containing alcohol dehydrogenase-like, C-terminal (25%)" TGITGEKMELDGYMVLEGATIAAYNHMNR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" FVTGMSNIRDVIPFPR Pseudomonadati Bacteria Pseudomonadati 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.3%) GO:0005737 (19.4%) "GO:0005524 (20.3%) GO:0004816 (20%) GO:0003676 (19.8%)" asparaginyl-tRNA aminoacylation (20.3%) cytoplasm (19.4%) "ATP binding (20.3%) asparagine-tRNA ligase activity (20%) nucleic acid binding (19.8%)" "IPR004364 (14.5%) IPR045864 (14.5%) IPR002312 (14.3%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (14.5%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.5%) Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.3%)" EGQKFQQAGNIEKAEENYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" ASVPSGASTGEHEALELR Bacteria Bacteria 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.6%) GO:0005576 (16.6%) GO:0009986 (16.4%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.6%) extracellular region (16.6%) cell surface (16.4%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020811 (16.8%) IPR020810 (16.7%)" "Enolase (16.8%) Enolase, N-terminal (16.8%) Enolase, C-terminal TIM barrel domain (16.7%)" DAEEHNEIVLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (33.3%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (33.3%)" "IPR003741 (13%) IPR004452 (13%) IPR009051 (13%)" "LUD domain (13%) L-lactate oxidation iron-sulfur protein LutB/LldF (13%) Alpha-helical ferredoxin (13%)" SEPIKGDVLNFDEVMER Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006006 (31.3%) GO:0005829 (31.7%) "GO:0008861 (31.7%) GO:0016829 (5.3%)" glucose metabolic process (31.3%) cytosol (31.7%) "formate C-acetyltransferase activity (31.7%) lyase activity (5.3%)" "IPR001150 (20.1%) IPR004184 (20.1%) IPR019777 (20.1%)" "Glycine radical domain (20.1%) Pyruvate formate lyase domain (20.1%) Formate C-acetyltransferase glycine radical, conserved site (20.1%)" NNQEYIATLTEGIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" GGGSANKTYLYQETK root "4.2.1.2 (99.7%) 5.3.2.2 (0.2%) 4.-.-.- (0%)" "fumarate hydratase (99.7%) oxaloacetate tautomerase (0.2%) Lyases (0%)" "GO:0006099 (19.5%) GO:0006091 (0.1%) GO:0006106 (0%)" "GO:0005829 (0.1%) GO:0016020 (0%)" "GO:0046872 (20.3%) GO:0051539 (20.3%) GO:0004333 (20%)" "tricarboxylic acid cycle (19.5%) generation of precursor metabolites and energy (0.1%) fumarate metabolic process (0%)" "cytosol (0.1%) membrane (0%)" "metal ion binding (20.3%) 4 iron, 4 sulfur cluster binding (20.3%) fumarate hydratase activity (20%)" "IPR004646 (17.5%) IPR051208 (17.5%) IPR004647 (16.9%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (17.5%) Class-I Fumarase/Tartrate Dehydratase (17.5%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.9%)" LAAEIIDAFNEQGGAYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.5%) GO:0015935 (20.5%) "GO:0003735 (20.5%) GO:0019843 (20.5%) GO:0000049 (17.8%)" translation (20.5%) small ribosomal subunit (20.5%) "structural constituent of ribosome (20.5%) rRNA binding (20.5%) tRNA binding (17.8%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" DGSFHPVDSDQLSFEICAIQAYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.5%) GO:0005737 (18.8%) "GO:0003746 (20.7%) GO:0005525 (20.5%) GO:0003924 (19.6%)" ribosome disassembly (20.5%) cytoplasm (18.8%) "translation elongation factor activity (20.7%) GTP binding (20.5%) GTPase activity (19.6%)" "IPR000640 (6.4%) IPR005517 (6.4%) IPR014721 (6.4%)" "Elongation factor EFG, domain V-like (6.4%) Translation elongation factor EFG/EF2, domain IV (6.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.4%)" AAGAELVGMEDLADQIK root "GO:0006417 (16.6%) GO:0006412 (16.5%) GO:0000027 (0%)" "GO:0022625 (16.7%) GO:0005840 (0.3%) GO:0005737 (0%)" "GO:0000049 (16.5%) GO:0003735 (16.5%) GO:0019843 (16.5%)" "regulation of translation (16.6%) translation (16.5%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (16.7%) ribosome (0.3%) cytoplasm (0%)" "tRNA binding (16.5%) structural constituent of ribosome (16.5%) rRNA binding (16.5%)" "IPR023674 (16.8%) IPR028364 (16.8%) IPR016095 (16.7%)" "Ribosomal protein uL1-like (16.8%) Ribosomal protein uL1/ribosomal biogenesis protein (16.8%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" DVLLFVDNIYR root "7.1.2.2 (97%) 3.6.3.14 (2.8%) 3.6.1.15 (0%)" "H(+)-transporting two-sector ATPase (97%) Transferred entry: 7.1.2.2 (2.8%) nucleoside-triphosphate phosphatase (0%)" "GO:0042776 (0.3%) GO:0042777 (0%)" "GO:0045259 (24.4%) GO:0005886 (21.3%) GO:0005743 (0.3%)" "GO:0005524 (24.4%) GO:0046933 (24.4%) GO:0016787 (3.8%)" "proton motive force-driven mitochondrial ATP synthesis (0.3%) proton motive force-driven plasma membrane ATP synthesis (0%)" "proton-transporting ATP synthase complex (24.4%) plasma membrane (21.3%) mitochondrial inner membrane (0.3%)" "ATP binding (24.4%) proton-transporting ATP synthase activity, rotational mechanism (24.4%) hydrolase activity (3.8%)" "IPR000194 (11.6%) IPR050053 (11.6%) IPR027417 (11.6%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11.6%) ATPase alpha/beta chains (11.6%) P-loop containing nucleoside triphosphate hydrolase (11.6%)" NISIAEKGHEER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005506 (50%) GO:0016491 (50%)" "iron ion binding (50%) oxidoreductase activity (50%)" "IPR003251 (14.3%) IPR009078 (14.3%) IPR012347 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like superfamily (14.3%) Ferritin-like (14.3%)" MQEIPGVTATETLISLEQSIKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0043200 (33.3%) GO:0005829 (33.3%) GO:0043565 (33.3%) response to amino acid (33.3%) cytosol (33.3%) sequence-specific DNA binding (33.3%) "IPR000485 (16.8%) IPR011008 (16.8%) IPR019887 (16.8%)" "AsnC-type HTH domain (16.8%) Dimeric alpha-beta barrel (16.8%) Transcription regulator AsnC/Lrp, ligand binding domain (16.8%)" VNDGVLTIELPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" ASVPSGASTGEHEALELRDKDASR Phocaeicola barnesiae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola barnesiae 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" EVGYMFGMYKK Pseudomonadati Bacteria Pseudomonadati "1.4.1.4 (81.3%) 1.4.1.2 (18.8%)" "glutamate dehydrogenase (NADP(+)) (81.3%) glutamate dehydrogenase (18.8%)" GO:0006537 (25.4%) "GO:0005829 (25.4%) GO:0009986 (1.3%)" "GO:0004354 (25.4%) GO:0000166 (21.5%) GO:0004352 (1.1%)" glutamate biosynthetic process (25.4%) "cytosol (25.4%) cell surface (1.3%)" "glutamate dehydrogenase (NADP+) activity (25.4%) nucleotide binding (21.5%) glutamate dehydrogenase (NAD+) activity (1.1%)" "IPR006097 (11.4%) IPR046346 (11.4%) IPR050724 (11.4%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.4%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (11.4%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (11.4%)" EGYELQVGQPQVIIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0000027 (10%) GO:0009409 (9.4%) GO:0010467 (9.3%)" "GO:0005829 (10.3%) GO:1990904 (10.3%)" "GO:0003924 (10.3%) GO:0005525 (10.3%) GO:0000049 (10%)" "ribosomal large subunit assembly (10%) response to cold (9.4%) gene expression (9.3%)" "cytosol (10.3%) ribonucleoprotein complex (10.3%)" "GTPase activity (10.3%) GTP binding (10.3%) tRNA binding (10%)" "IPR000640 (6.7%) IPR009000 (6.7%) IPR035647 (6.7%)" "Elongation factor EFG, domain V-like (6.7%) Translation protein, beta-barrel domain superfamily (6.7%) EF-G domain III/V-like (6.7%)" EIGDTSVFDSKWEQAMEAVYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005975 (62.5%) GO:0016787 (37.5%) carbohydrate metabolic process (62.5%) hydrolase activity (37.5%) "IPR008313 (33.3%) IPR008928 (33.3%) IPR012341 (33.3%)" "Metal-independent alpha-mannosidase (33.3%) Six-hairpin glycosidase superfamily (33.3%) Six-hairpin glycosidase-like superfamily (33.3%)" AIVYEILSSHGVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (33.3%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (33.3%)" "IPR003741 (12.7%) IPR004452 (12.7%) IPR009051 (12.7%)" "LUD domain (12.7%) L-lactate oxidation iron-sulfur protein LutB/LldF (12.7%) Alpha-helical ferredoxin (12.7%)" VEHGILSIEIPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" TLADEILPQLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR011990 (50.7%) IPR019734 (47.9%) IPR013105 (0.5%)" "Tetratricopeptide-like helical domain superfamily (50.7%) Tetratricopeptide repeat (47.9%) Tetratricopeptide repeat 2 (0.5%)" AQAHIEAGAK Bacteria Bacteria "1.2.1.- (88.2%) 1.2.1.12 (11.8%)" "With NAD(+) or NADP(+) as acceptor (88.2%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (11.8%)" "GO:0006006 (21.4%) GO:0006096 (6.1%) GO:0010039 (0.1%)" "GO:0005737 (1.8%) GO:0005829 (0.1%) GO:0009274 (0.1%)" "GO:0051287 (24%) GO:0050661 (21.4%) GO:0004365 (14.6%)" "glucose metabolic process (21.4%) glycolytic process (6.1%) response to iron ion (0.1%)" "cytoplasm (1.8%) cytosol (0.1%) peptidoglycan-based cell wall (0.1%)" "NAD binding (24%) NADP binding (21.4%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (14.6%)" "IPR020828 (17.1%) IPR020831 (17.1%) IPR036291 (16.9%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17.1%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.1%) NAD(P)-binding domain superfamily (16.9%)" NDLQGATLAIVPGDPDRVEK root 2.4.2.3 (100%) uridine phosphorylase (100%) "GO:0009164 (20.6%) GO:0009166 (20%) GO:0044206 (15.3%)" "GO:0005829 (20.8%) GO:0032991 (0.2%)" "GO:0004850 (21%) GO:0016757 (0.6%) GO:0005524 (0.2%)" "nucleoside catabolic process (20.6%) nucleotide catabolic process (20%) UMP salvage (15.3%)" "cytosol (20.8%) protein-containing complex (0.2%)" "uridine phosphorylase activity (21%) glycosyltransferase activity (0.6%) ATP binding (0.2%)" "IPR035994 (25.4%) IPR000845 (25.1%) IPR018016 (25.1%)" "Nucleoside phosphorylase superfamily (25.4%) Nucleoside phosphorylase domain (25.1%) Nucleoside phosphorylase, conserved site (25.1%)" GQYGHVVIDMYPLEPGSNPK root 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0032790 (16.8%) GO:0006414 (0%)" "GO:0005737 (15.9%) GO:0005829 (0%) GO:0005739 (0%)" "GO:0003746 (17.3%) GO:0005525 (16.9%) GO:0003924 (16.3%)" "ribosome disassembly (16.8%) translational elongation (0%)" "cytoplasm (15.9%) cytosol (0%) mitochondrion (0%)" "translation elongation factor activity (17.3%) GTP binding (16.9%) GTPase activity (16.3%)" "IPR005517 (6.4%) IPR014721 (6.4%) IPR020568 (6.4%)" "Translation elongation factor EFG/EF2, domain IV (6.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.4%) Ribosomal protein uS5 domain 2-type superfamily (6.4%)" SEMYKEGR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20.3%) "GO:0022627 (20.3%) GO:0005840 (0.1%)" "GO:0003735 (20.3%) GO:0019843 (20.1%) GO:0003729 (19%)" translation (20.3%) "cytosolic small ribosomal subunit (20.3%) ribosome (0.1%)" "structural constituent of ribosome (20.3%) rRNA binding (20.1%) mRNA binding (19%)" "IPR001351 (11.2%) IPR005704 (11.2%) IPR036419 (11.2%)" "Small ribosomal subunit protein uS3, C-terminal (11.2%) Small ribosomal subunit protein uS3, bacteria (11.2%) Ribosomal protein S3, C-terminal domain superfamily (11.2%)" AINIDTLQQMAEAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR001196 (20%) IPR005749 (20%) IPR021131 (20%)" "Large ribosomal subunit protein uL15, conserved site (20%) Large ribosomal subunit protein uL15, bacteria (20%) Large ribosomal subunit protein uL15/eL18 (20%)" RAQSVVDYLISK root "GO:0034220 (22.5%) GO:0006811 (2.4%) GO:0007155 (0.1%)" "GO:0009279 (24.9%) GO:0046930 (24.8%) GO:0019867 (0.1%)" "GO:0015288 (24.8%) GO:0016740 (0.1%) GO:0005509 (0.1%)" "monoatomic ion transmembrane transport (22.5%) monoatomic ion transport (2.4%) cell adhesion (0.1%)" "cell outer membrane (24.9%) pore complex (24.8%) outer membrane (0.1%)" "porin activity (24.8%) transferase activity (0.1%) calcium ion binding (0.1%)" "IPR006665 (12.6%) IPR050330 (12.6%) IPR006664 (12.6%)" "OmpA-like domain (12.6%) Bacterial Outer Membrane Structural/Functional (12.6%) Outer membrane protein, bacterial (12.6%)" AMVPLAEMFGYVTALR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0032790 (20.2%) GO:0005737 (19.4%) "GO:0003746 (20.3%) GO:0005525 (20.2%) GO:0003924 (19.8%)" ribosome disassembly (20.2%) cytoplasm (19.4%) "translation elongation factor activity (20.3%) GTP binding (20.2%) GTPase activity (19.8%)" "IPR000640 (6.3%) IPR005517 (6.3%) IPR035649 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translation elongation factor EFG/EF2, domain IV (6.3%) EFG, domain V (6.3%)" LREEIAEQHR Bacteria Bacteria 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (30.8%) GO:0005975 (0%) GO:0044814 (0%)" "GO:0005829 (32%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0008861 (32.1%) GO:0016829 (4.6%) GO:0016746 (0.4%)" "glucose metabolic process (30.8%) carbohydrate metabolic process (0%) pyruvate fermentation via PFL (0%)" "cytosol (32%) cytoplasm (0.1%) membrane (0%)" "formate C-acetyltransferase activity (32.1%) lyase activity (4.6%) acyltransferase activity (0.4%)" "IPR004184 (20.5%) IPR050244 (20.5%) IPR005949 (19.7%)" "Pyruvate formate lyase domain (20.5%) Autonomous Glycyl Radical Cofactor (20.5%) Formate acetyltransferase (19.7%)" LIESNTTIPTKK root "GO:0005737 (16.2%) GO:0070013 (0.3%)" "GO:0005524 (27.9%) GO:0140662 (27.9%) GO:0051082 (27.6%)" "cytoplasm (16.2%) intracellular organelle lumen (0.3%)" "ATP binding (27.9%) ATP-dependent protein folding chaperone (27.9%) unfolded protein binding (27.6%)" "IPR013126 (16.7%) IPR018181 (16.7%) IPR029047 (16.7%)" "Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%) Heat shock protein 70kD, peptide-binding domain superfamily (16.7%)" ALYNAVEASTFVPEDFEVPFGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (25.9%) GO:0003863 (7.4%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (25.9%) branched-chain 2-oxo acid dehydrogenase activity (7.4%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" LFEGSENFKR Pseudomonadati Bacteria Pseudomonadati 5.1.3.20 (100%) ADP-glyceromanno-heptose 6-epimerase (100%) "GO:0097171 (22.8%) GO:0009244 (21.3%) GO:0005975 (4.1%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0008712 (25.9%) GO:0050661 (25.4%) GO:0016853 (0.3%)" "ADP-L-glycero-beta-D-manno-heptose biosynthetic process (22.8%) lipopolysaccharide core region biosynthetic process (21.3%) carbohydrate metabolic process (4.1%)" "cytosol (0%) membrane (0%)" "ADP-glyceromanno-heptose 6-epimerase activity (25.9%) NADP binding (25.4%) isomerase activity (0.3%)" "IPR001509 (33.7%) IPR036291 (33.7%) IPR011912 (32.6%)" "NAD-dependent epimerase/dehydratase (33.7%) NAD(P)-binding domain superfamily (33.7%) ADP-L-glycero-D-manno-heptose-6-epimerase (32.6%)" LLDALRPEIHGMVHCSGGAQTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.3.1 (100%) phosphoribosylformylglycinamidine cyclo-ligase (100%) "GO:0006189 (16.7%) GO:0046084 (16.7%)" GO:0005829 (16.7%) "GO:0004637 (16.7%) GO:0004641 (16.7%) GO:0005524 (16.7%)" "'de novo' IMP biosynthetic process (16.7%) adenine biosynthetic process (16.7%)" cytosol (16.7%) "phosphoribosylamine-glycine ligase activity (16.7%) phosphoribosylformylglycinamidine cyclo-ligase activity (16.7%) ATP binding (16.7%)" "IPR004733 (20%) IPR010918 (20%) IPR036676 (20%)" "Phosphoribosylformylglycinamidine cyclo-ligase (20%) PurM-like, C-terminal domain (20%) PurM-like, C-terminal domain superfamily (20%)" GIDKAVTAAVEELKALSVPCSDSK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.6%) GO:0006457 (0.1%) GO:0009314 (0.1%)" "GO:0005737 (16.2%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0140662 (17.6%) GO:0005524 (17.4%) GO:0016853 (16.8%)" "protein refolding (17.6%) protein folding (0.1%) response to radiation (0.1%)" "cytoplasm (16.2%) cytosol (0.1%) membrane (0.1%)" "ATP-dependent protein folding chaperone (17.6%) ATP binding (17.4%) isomerase activity (16.8%)" "IPR001844 (17.4%) IPR027413 (17.3%) IPR002423 (17.1%)" "Chaperonin Cpn60/GroEL (17.4%) GroEL-like equatorial domain superfamily (17.3%) Chaperonin Cpn60/GroEL/TCP-1 family (17.1%)" TMAAEYGLEAEPVIGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016787 (100%) hydrolase activity (100%) "IPR001466 (20%) IPR005180 (20%) IPR012338 (20%)" "Beta-lactamase-related (20%) Domain of unknown function DUF302 (20%) Beta-lactamase/transpeptidase-like (20%)" FIDTYGGGSENAIHTQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.6.2.2 (98.1%) 5.99.1.3 (1.9%)" "DNA topoisomerase (ATP-hydrolyzing) (98.1%) Transferred entry: 5.6.2.2 (1.9%)" "GO:0006265 (12.7%) GO:0006261 (11.7%) GO:0032259 (0.2%)" "GO:0005737 (12.5%) GO:0005694 (12%)" "GO:0003677 (12.7%) GO:0005524 (12.7%) GO:0046872 (12.5%)" "DNA topological change (12.7%) DNA-templated DNA replication (11.7%) methylation (0.2%)" "cytoplasm (12.5%) chromosome (12%)" "DNA binding (12.7%) ATP binding (12.7%) metal ion binding (12.5%)" "IPR000565 (7.5%) IPR001241 (7.5%) IPR006171 (7.5%)" "DNA topoisomerase, type IIA, subunit B (7.5%) DNA topoisomerase, type IIA (7.5%) TOPRIM domain (7.5%)" TLCIDGITANEEKCR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.9%) GO:0006531 (24.9%)" GO:0005829 (24.9%) "GO:0008797 (24.9%) GO:0016853 (0.5%)" "tricarboxylic acid cycle (24.9%) aspartate metabolic process (24.9%)" cytosol (24.9%) "aspartate ammonia-lyase activity (24.9%) isomerase activity (0.5%)" "IPR008948 (13.7%) IPR018951 (13.7%) IPR051546 (13.7%)" "L-Aspartase-like (13.7%) Fumarase C, C-terminal (13.7%) Class-II Aspartate Ammonia-Lyase (13.7%)" SGAQVINAFVPLSEMFGYSTELR Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0032790 (20.6%) GO:0005737 (19.1%) "GO:0003746 (20.6%) GO:0005525 (20.6%) GO:0003924 (19.1%)" ribosome disassembly (20.6%) cytoplasm (19.1%) "translation elongation factor activity (20.6%) GTP binding (20.6%) GTPase activity (19.1%)" "IPR000640 (6.5%) IPR005517 (6.5%) IPR009022 (6.5%)" "Elongation factor EFG, domain V-like (6.5%) Translation elongation factor EFG/EF2, domain IV (6.5%) Elongation factor G, domain III (6.5%)" GELSADCQTNK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "4.2.1.136 (50%) 5.1.99.6 (50%)" "ADP-dependent NAD(P)H-hydrate dehydratase (50%) NAD(P)H-hydrate epimerase (50%)" "GO:0046496 (15.6%) GO:0110051 (15.6%)" "GO:0005524 (15.6%) GO:0046872 (15.6%) GO:0052855 (15.6%)" "nicotinamide nucleotide metabolic process (15.6%) metabolite repair (15.6%)" "ATP binding (15.6%) metal ion binding (15.6%) ADP-dependent NAD(P)H-hydrate dehydratase activity (15.6%)" "IPR000631 (16.7%) IPR004443 (16.7%) IPR017953 (16.7%)" "ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase (16.7%) YjeF N-terminal domain (16.7%) Carbohydrate kinase, predicted, conserved site (16.7%)" GGIHGVTYPLVSDFSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" SKEMCPYQTINQR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006417 (49.6%) GO:0022611 (0.1%) GO:0032055 (0.1%)" GO:0005737 (49.6%) "GO:0019843 (0.1%) GO:0043022 (0.1%) GO:0043024 (0.1%)" "regulation of translation (49.6%) dormancy process (0.1%) negative regulation of translation in response to stress (0.1%)" cytoplasm (49.6%) "rRNA binding (0.1%) ribosome binding (0.1%) ribosomal small subunit binding (0.1%)" "IPR007040 (50%) IPR023200 (50%)" "Ribosome modulation factor (50%) Ribosome modulation factor domain superfamily (50%)" AAIFPSKGEMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.8%) GO:0005829 (16.8%) "GO:0003723 (16.8%) GO:0004831 (16.8%) GO:0005524 (16.8%)" tyrosyl-tRNA aminoacylation (16.8%) cytosol (16.8%) "RNA binding (16.8%) tyrosine-tRNA ligase activity (16.8%) ATP binding (16.8%)" "IPR002305 (12.6%) IPR002307 (12.6%) IPR014729 (12.6%)" "Aminoacyl-tRNA synthetase, class Ic (12.6%) Tyrosine-tRNA ligase (12.6%) Rossmann-like alpha/beta/alpha sandwich fold (12.6%)" TAPGANDTLTDADALKIVQK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0016884 (93.8%) GO:0016740 (6.3%)" "carbon-nitrogen ligase activity, with glutamine as amido-N-donor (93.8%) transferase activity (6.3%)" "IPR003789 (25.4%) IPR019004 (25.4%) IPR042184 (25.4%)" "Aspartyl/glutamyl-tRNA amidotransferase subunit B-like (25.4%) Uncharacterised protein YqeY/Aim41 (25.4%) YqeY/Aim41, N-terminal domain (25.4%)" LIEIKAPEVILR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) "GO:0000428 (17%) GO:0031981 (0.1%)" "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (15.3%)" DNA-templated transcription (17%) "DNA-directed RNA polymerase complex (17%) nuclear lumen (0.1%)" "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (15.3%)" "IPR007080 (9.2%) IPR045867 (9.2%) IPR000722 (9.1%)" "RNA polymerase Rpb1, domain 1 (9.2%) DNA-directed RNA polymerase, subunit beta-prime (9.2%) RNA polymerase, alpha subunit (9.1%)" AYWDDGAQVLAPHDKGIIDEVNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.2 (62.5%) 5.4.2.- (37.5%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (62.5%) Phosphotransferases (phosphomutases) (37.5%)" "GO:0005975 (24.5%) GO:0006166 (24.5%)" "GO:0000287 (24.5%) GO:0008973 (24.5%) GO:0004614 (2.2%)" "carbohydrate metabolic process (24.5%) purine ribonucleoside salvage (24.5%)" "magnesium ion binding (24.5%) phosphopentomutase activity (24.5%) phosphoglucomutase activity (2.2%)" "IPR005844 (13%) IPR016055 (13%) IPR016066 (13%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (13%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (13%) Alpha-D-phosphohexomutase, conserved site (13%)" AQYTCFPNDKGGIVDDLLVYHYEPEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (15.7%) GO:0032259 (10.7%)" "GO:0005829 (15.7%) GO:0005960 (15.7%)" "GO:0004047 (15.7%) GO:0008483 (15.7%) GO:0008168 (10.7%)" "glycine decarboxylation via glycine cleavage system (15.7%) methylation (10.7%)" "cytosol (15.7%) glycine cleavage complex (15.7%)" "aminomethyltransferase activity (15.7%) transaminase activity (15.7%) methyltransferase activity (10.7%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" NAFTPTTTGEMSDALR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.3.36 (100%) 1,4-dihydroxy-2-naphthoyl-CoA synthase (100%) GO:0009234 (33.3%) GO:0005829 (33.3%) GO:0008935 (33.3%) menaquinone biosynthetic process (33.3%) cytosol (33.3%) 1,4-dihydroxy-2-naphthoyl-CoA synthase activity (33.3%) "IPR001753 (20.6%) IPR029045 (20.6%) IPR010198 (19.6%)" "Enoyl-CoA hydratase/isomerase (20.6%) ClpP/crotonase-like domain superfamily (20.6%) 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB (19.6%)" QESLDKLADMLNIPHK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "4.2.1.59 (52.6%) 3.5.1.108 (47.4%)" "3-hydroxyacyl-[acyl-carrier-protein] dehydratase (52.6%) UDP-3-O-acyl-N-acetylglucosamine deacetylase (47.4%)" "GO:0006633 (14.5%) GO:0009245 (14.5%)" "GO:0005737 (14.5%) GO:0016020 (14.5%)" "GO:0103117 (14.5%) GO:0046872 (13%) GO:0019171 (10.1%)" "fatty acid biosynthetic process (14.5%) lipid A biosynthetic process (14.5%)" "cytoplasm (14.5%) membrane (14.5%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.5%) metal ion binding (13%) (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (10.1%)" "IPR004463 (14.5%) IPR010084 (14.5%) IPR011334 (14.5%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.5%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (14.5%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.5%)" LTTTPSEAGNHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" AGAEGGQIIENPILSNFKEGLSVLEYFISTHGAR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) GO:0000428 (17%) "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0000287 (15.5%)" DNA-templated transcription (16.8%) DNA-directed RNA polymerase complex (17%) "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) magnesium ion binding (15.5%)" "IPR007081 (9.1%) IPR007083 (9.1%) IPR038120 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.1%) RNA polymerase Rpb1, domain 4 (9.1%) RNA polymerase Rpb1, funnel domain superfamily (9.1%)" IRITAEMDPANLK Pseudomonadati Bacteria Pseudomonadati "1.2.1.- (95.8%) 1.2.1.12 (4.2%)" "With NAD(+) or NADP(+) as acceptor (95.8%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (4.2%)" "GO:0006006 (16.8%) GO:0006096 (16.1%)" GO:0005737 (16.1%) "GO:0051287 (17.2%) GO:0050661 (16.8%) GO:0004365 (9.1%)" "glucose metabolic process (16.8%) glycolytic process (16.1%)" cytoplasm (16.1%) "NAD binding (17.2%) NADP binding (16.8%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (9.1%)" "IPR020828 (16.8%) IPR020831 (16.8%) IPR036291 (16.8%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.8%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (16.8%) NAD(P)-binding domain superfamily (16.8%)" KIDAIISSLSITDKR root 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (48.4%) GO:0006995 (0.1%) GO:0009267 (0.1%)" "GO:0030288 (50.3%) GO:0030313 (0.2%) GO:0016020 (0.1%)" "GO:0016597 (0.2%) GO:0005524 (0.1%) GO:0016787 (0.1%)" "amino acid transport (48.4%) cellular response to nitrogen starvation (0.1%) cellular response to starvation (0.1%)" "outer membrane-bounded periplasmic space (50.3%) cell envelope (0.2%) membrane (0.1%)" "amino acid binding (0.2%) ATP binding (0.1%) hydrolase activity (0.1%)" "IPR001638 (33.7%) IPR018313 (33.4%) IPR005768 (32.9%)" "Solute-binding protein family 3/N-terminal domain of MltF (33.7%) Solute-binding protein family 3, conserved site (33.4%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (32.9%)" AIFWHDETMGAEYSVEEIPADLQAEAEEWRDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" FGGAEVFIKPASHGTGVVAGGAMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (16.9%) GO:0042254 (15.9%)" "GO:0015935 (16.5%) GO:0005737 (16.3%) GO:0005840 (0.4%)" "GO:0003735 (16.9%) GO:0019843 (16.7%) GO:0003723 (0.2%)" "translation (16.9%) ribosome biogenesis (15.9%)" "small ribosomal subunit (16.5%) cytoplasm (16.3%) ribosome (0.4%)" "structural constituent of ribosome (16.9%) rRNA binding (16.7%) RNA binding (0.2%)" "IPR000851 (14.4%) IPR005324 (14.4%) IPR014721 (14.4%)" "Small ribosomal subunit protein uS5 (14.4%) Small ribosomal subunit protein uS5, C-terminal (14.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (14.4%)" SAFDEFSTPAAR root "2.5.1.18 (50%) 3.5.2.3 (50%)" "glutathione transferase (50%) dihydroorotase (50%)" "GO:0006207 (0.2%) GO:0006221 (0.2%) GO:0006281 (0.2%)" "GO:0005829 (98%) GO:0005886 (0.2%)" "GO:0004364 (0.4%) GO:0004151 (0.2%) GO:0015038 (0.2%)" "'de novo' pyrimidine nucleobase biosynthetic process (0.2%) pyrimidine nucleotide biosynthetic process (0.2%) DNA repair (0.2%)" "cytosol (98%) plasma membrane (0.2%)" "glutathione transferase activity (0.4%) dihydroorotase activity (0.2%) glutathione disulfide oxidoreductase activity (0.2%)" "IPR007494 (16.4%) IPR036282 (16.4%) IPR011901 (16.1%)" "Glutaredoxin 2, C-terminal (16.4%) Glutathione S-transferase, C-terminal domain superfamily (16.4%) Glutaredoxin-2 (16.1%)" MQSQKPTINASLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) VNVDKEPELAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0045454 (32.5%) GO:0005829 (32.5%) "GO:0015035 (32.5%) GO:0046872 (2.5%)" cell redox homeostasis (32.5%) cytosol (32.5%) "protein-disulfide reductase activity (32.5%) metal ion binding (2.5%)" "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" YVTDIMPVAHAEFSEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.95 (66.7%) 1.1.1.81 (33.3%)" "phosphoglycerate dehydrogenase (66.7%) hydroxypyruvate reductase (33.3%)" "GO:0051287 (50%) GO:0016616 (38.9%) GO:0004617 (8.3%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (38.9%) phosphoglycerate dehydrogenase activity (8.3%)" "IPR006139 (33.3%) IPR006140 (33.3%) IPR036291 (33.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" DNDTETNSHIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006281 (20%) GO:0006310 (20%) GO:0009432 (20%)" GO:0043590 (20%) GO:0005524 (20%) "DNA repair (20%) DNA recombination (20%) SOS response (20%)" bacterial nucleoid (20%) ATP binding (20%) "IPR004604 (33.7%) IPR027417 (33.7%) IPR003395 (32.6%)" "DNA recombination/repair protein RecN (33.7%) P-loop containing nucleoside triphosphate hydrolase (33.7%) RecF/RecN/SMC, N-terminal (32.6%)" NPQTGAEIKIPASK Bacteria Bacteria "GO:0030261 (11.2%) GO:0006270 (11%) GO:0010467 (5.5%)" "GO:0005829 (11.2%) GO:1990103 (11%) GO:1990178 (11%)" "GO:0003677 (11.5%) GO:0030527 (11.2%) GO:0042802 (11%)" "chromosome condensation (11.2%) DNA replication initiation (11%) gene expression (5.5%)" "cytosol (11.2%) DnaA-HU complex (11%) HU-DNA complex (11%)" "DNA binding (11.5%) structural constituent of chromatin (11.2%) identical protein binding (11%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" ELAPQVMAFVEQGIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (12.9%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (12.9%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" SELEAFEVALENVRPTVEVK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006412 (19.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0015935 (19.6%) GO:0005840 (0.7%) GO:0022627 (0.1%)" "GO:0003735 (19.8%) GO:0019843 (19.7%) GO:0000049 (19.5%)" "translation (19.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "small ribosomal subunit (19.6%) ribosome (0.7%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (19.8%) rRNA binding (19.7%) tRNA binding (19.5%)" "IPR023798 (20.1%) IPR036823 (20.1%) IPR000235 (20.1%)" "Small ribosomal subunit protein uS7 domain (20.1%) Small ribosomal subunit protein uS7 domain superfamily (20.1%) Small ribosomal subunit protein uS7 (20.1%)" EKSVEELNTELLNLLR Bacteria Bacteria "GO:0006412 (33%) GO:0000027 (0.1%) GO:0002181 (0.1%)" "GO:0022625 (32.8%) GO:0005840 (0.8%) GO:1990904 (0.2%)" "GO:0003735 (33%) GO:0019843 (0.1%)" "translation (33%) ribosomal large subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic large ribosomal subunit (32.8%) ribosome (0.8%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (33%) rRNA binding (0.1%)" "IPR001854 (25.2%) IPR036049 (25.2%) IPR050063 (25.1%)" "Large ribosomal subunit protein uL29 (25.2%) Large ribosomal subunit protein uL29 superfamily (25.2%) Universal ribosomal protein uL29 (25.1%)" MDEIMDIAGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.6.1.- (100%) Transaminases (100%) GO:0000271 (33.3%) "GO:0030170 (33.3%) GO:0008483 (32.3%) GO:0019180 (1.1%)" polysaccharide biosynthetic process (33.3%) "pyridoxal phosphate binding (33.3%) transaminase activity (32.3%) dTDP-4-amino-4,6-dideoxygalactose transaminase activity (1.1%)" "IPR000653 (25.4%) IPR015421 (25.4%) IPR015424 (25.4%)" "DegT/DnrJ/EryC1/StrS aminotransferase (25.4%) Pyridoxal phosphate-dependent transferase, major domain (25.4%) Pyridoxal phosphate-dependent transferase (25.4%)" LFDDCSYYNQVATTPEQFPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.5.1 (100%) pyruvate dehydrogenase (quinone) (100%) "GO:0019752 (23.1%) GO:0044281 (1.9%)" "GO:0000287 (25%) GO:0030976 (25%) GO:0003824 (19.2%)" "carboxylic acid metabolic process (23.1%) small molecule metabolic process (1.9%)" "magnesium ion binding (25%) thiamine pyrophosphate binding (25%) catalytic activity (19.2%)" "IPR000399 (11.2%) IPR011766 (11.2%) IPR012001 (11.2%)" "TPP-binding enzyme, conserved site (11.2%) Thiamine pyrophosphate enzyme, TPP-binding (11.2%) Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (11.2%)" ITNELGWYPETKFETGIVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.46 (100%) dTDP-glucose 4,6-dehydratase (100%) GO:0009225 (50%) GO:0008460 (50%) nucleotide-sugar metabolic process (50%) dTDP-glucose 4,6-dehydratase activity (50%) "IPR005888 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "dTDP-glucose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" EPPLKVHGDVYNYNEREYDDDYYSQPGALFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" GO:0005737 (16.7%) "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16.7%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" cytoplasm (16.7%) "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16.7%)" "IPR002226 (12.5%) IPR010582 (12.5%) IPR011614 (12.5%)" "Catalase haem-binding site (12.5%) Catalase immune-responsive domain (12.5%) Catalase core domain (12.5%)" TNYQTSDVNGVMDGKIDDFIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (48.4%) "GO:0016149 (48.4%) GO:0003747 (1.6%) GO:0016787 (1.6%)" cytoplasm (48.4%) "translation release factor activity, codon specific (48.4%) translation release factor activity (1.6%) hydrolase activity (1.6%)" "IPR045853 (26%) IPR000352 (25.2%) IPR004374 (24.4%)" "Peptide chain release factor class I superfamily (26%) Peptide chain release factor class I (25.2%) Peptide chain release factor 2 (24.4%)" HRPDIIVPEIEAIRTER Pseudomonadati Bacteria Pseudomonadati "6.3.1.21 (86.4%) 2.1.2.- (13.6%)" "phosphoribosylglycinamide formyltransferase 2 (86.4%) Hydroxymethyl-, formyl- and related transferases (13.6%)" "GO:0006189 (16.1%) GO:0006164 (0.2%) GO:0009152 (0.2%)" GO:0005829 (16.6%) "GO:0005524 (16.6%) GO:0000287 (16.4%) GO:0004644 (16.4%)" "'de novo' IMP biosynthetic process (16.1%) purine nucleotide biosynthetic process (0.2%) purine ribonucleotide biosynthetic process (0.2%)" cytosol (16.6%) "ATP binding (16.6%) magnesium ion binding (16.4%) phosphoribosylglycinamide formyltransferase activity (16.4%)" "IPR003135 (12.6%) IPR011761 (12.6%) IPR013815 (12.6%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.6%) ATP-grasp fold (12.6%) ATP-grasp fold, subdomain 1 (12.6%)" RGMEELTSDIPNVSEEATKDLDENGIVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (19.9%) GO:0000428 (20.1%) "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (19.9%)" DNA-templated transcription (19.9%) DNA-directed RNA polymerase complex (20.1%) "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (19.9%)" "IPR007120 (7.9%) IPR015712 (7.9%) IPR010243 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) DNA-directed RNA polymerase, subunit 2 (7.9%) DNA-directed RNA polymerase beta subunit, bacterial-type (7.9%)" AVGESVQKPILYYR root "5.1.3.2 (99.5%) 5.1.3.- (0.5%)" "UDP-glucose 4-epimerase (99.5%) Acting on carbohydrates and derivatives (0.5%)" "GO:0006012 (32.4%) GO:0033499 (0.8%)" GO:0005829 (33.2%) "GO:0003978 (33.2%) GO:0003974 (0.2%) GO:0016853 (0.2%)" "galactose metabolic process (32.4%) galactose catabolic process via UDP-galactose, Leloir pathway (0.8%)" cytosol (33.2%) "UDP-glucose 4-epimerase activity (33.2%) UDP-N-acetylglucosamine 4-epimerase activity (0.2%) isomerase activity (0.2%)" "IPR005886 (33.4%) IPR036291 (33.2%) IPR016040 (19.3%)" "UDP-glucose 4-epimerase (33.4%) NAD(P)-binding domain superfamily (33.2%) NAD(P)-binding domain (19.3%)" MVSPIIDELATEYEGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" LGAYHCTTVVDCNTR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005980 (33.3%) "GO:0004134 (33.3%) GO:0004135 (33.3%)" glycogen catabolic process (33.3%) "4-alpha-glucanotransferase activity (33.3%) amylo-alpha-1,6-glucosidase activity (33.3%)" "IPR008928 (20%) IPR010401 (20%) IPR012341 (20%)" "Six-hairpin glycosidase superfamily (20%) Glycogen debranching enzyme (20%) Six-hairpin glycosidase-like superfamily (20%)" ADASKKDETKNEASTPVVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.21.- (100%) Serine endopeptidases (100%) GO:0006508 (32.7%) GO:0005737 (32.7%) "GO:0008236 (32.7%) GO:0003743 (1.9%)" proteolysis (32.7%) cytoplasm (32.7%) "serine-type peptidase activity (32.7%) translation initiation factor activity (1.9%)" "IPR005151 (12.5%) IPR011659 (12.5%) IPR012393 (12.5%)" "Tail specific protease (12.5%) WD40-like beta-propeller (12.5%) Tricorn protease (12.5%)" AIEEPLRQIVANAGKEGAVIVQK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.1%) GO:0005737 (16.2%) "GO:0005524 (17.1%) GO:0140662 (17.1%) GO:0016853 (16.2%)" protein refolding (17.1%) cytoplasm (16.2%) "ATP binding (17.1%) ATP-dependent protein folding chaperone (17.1%) isomerase activity (16.2%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" FDEGVSFGGNYGPYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004818 (16.7%) GO:0005524 (16.7%)" glutamyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR000924 (9.9%) IPR004527 (9.9%) IPR008925 (9.9%)" "Glutamyl/glutaminyl-tRNA synthetase (9.9%) Glutamate-tRNA ligase, bacterial/mitochondrial (9.9%) Aminoacyl-tRNA synthetase, class I, anticodon-binding superfamily (9.9%)" AFTEQYPEIASK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR011542 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufD (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" GAELTGSDMAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006508 (21.2%) GO:0009636 (19.2%) GO:0043418 (19.2%)" GO:0005737 (19.2%) GO:0070005 (21.2%) "proteolysis (21.2%) response to toxic substance (19.2%) homocysteine catabolic process (19.2%)" cytoplasm (19.2%) cysteine-type aminopeptidase activity (21.2%) "IPR004134 (45.9%) IPR038765 (45.9%) IPR000668 (7.7%)" "Peptidase C1B, bleomycin hydrolase (45.9%) Papain-like cysteine peptidase superfamily (45.9%) Peptidase C1A, papain C-terminal (7.7%)" SLANQLGCQLEAVVAGTGLKDIEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0033539 (33.3%) "GO:0009055 (33.3%) GO:0050660 (33.3%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (33.3%) "electron transfer activity (33.3%) flavin adenine dinucleotide binding (33.3%)" "IPR001308 (16.7%) IPR014729 (16.7%) IPR014730 (16.7%)" "Electron transfer flavoprotein alpha subunit/FixB (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.7%)" ILIGEVTVVDESEPFAHEK root "1.1.1.1 (55.1%) 1.2.1.10 (44.9%)" "alcohol dehydrogenase (55.1%) acetaldehyde dehydrogenase (acetylating) (44.9%)" "GO:0015976 (15.1%) GO:0006066 (15.1%) GO:0006115 (0%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0046872 (20.4%) GO:0008774 (18.8%) GO:0004022 (18.6%)" "carbon utilization (15.1%) alcohol metabolic process (15.1%) ethanol biosynthetic process (0%)" "cytosol (0%) membrane (0%)" "metal ion binding (20.4%) acetaldehyde dehydrogenase (acetylating) activity (18.8%) alcohol dehydrogenase (NAD+) activity (18.6%)" "IPR016163 (11.9%) IPR016161 (11.8%) IPR016162 (11.6%)" "Aldehyde dehydrogenase, C-terminal (11.9%) Aldehyde/histidinol dehydrogenase (11.8%) Aldehyde dehydrogenase, N-terminal (11.6%)" TELCHTLNGSALALPR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.11 (100%) serine--tRNA ligase (100%) "GO:0006434 (24.7%) GO:0006418 (0.3%)" "GO:0005737 (24.6%) GO:0005829 (0.1%)" "GO:0004828 (25%) GO:0005524 (25%) GO:0016874 (0.3%)" "seryl-tRNA aminoacylation (24.7%) tRNA aminoacylation for protein translation (0.3%)" "cytoplasm (24.6%) cytosol (0.1%)" "serine-tRNA ligase activity (25%) ATP binding (25%) ligase activity (0.3%)" "IPR002314 (14.2%) IPR006195 (14.2%) IPR045864 (14.2%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (14.2%) Aminoacyl-tRNA synthetase, class II (14.2%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.2%)" VALPIPQSEIDANPNIVQNKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" ILLRPQEISNNPEVAR Bacteria Bacteria "2.8.3.- (80%) 2.8.3.18 (10%) 3.1.2.1 (10%)" "CoA-transferases (80%) succinyl-CoA:acetate CoA-transferase (10%) acetyl-CoA hydrolase (10%)" "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" WYVVQAFSGFEGR Bacteria Bacteria "GO:0031564 (20.1%) GO:0006354 (20%) GO:0006353 (19.8%)" "GO:0005829 (20.1%) GO:0008023 (0%) GO:0016020 (0%)" GO:0016491 (0%) "transcription antitermination (20.1%) DNA-templated transcription elongation (20%) DNA-templated transcription termination (19.8%)" "cytosol (20.1%) transcription elongation factor complex (0%) membrane (0%)" oxidoreductase activity (0%) "IPR036735 (11.3%) IPR006645 (11.3%) IPR043425 (11.2%)" "NusG, N-terminal domain superfamily (11.3%) NusG-like, N-terminal (11.3%) NusG-like (11.2%)" TASQGLLLMIPNMYKIAGEFLPCVFHVSAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (73.2%) 1.2.7.- (24.4%) 1.2.1.51 (2.4%)" "pyruvate synthase (73.2%) With an iron-sulfur protein as acceptor (24.4%) pyruvate dehydrogenase (NADP(+)) (2.4%)" "GO:0006979 (14.9%) GO:0022900 (14.7%) GO:0044281 (11.6%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.3%)" "response to oxidative stress (14.9%) electron transport chain (14.7%) small molecule metabolic process (11.6%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.3%)" "IPR002880 (7.8%) IPR029061 (7.8%) IPR050722 (7.8%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.8%) Thiamin diphosphate-binding fold (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%)" VWNITEGSDDERIDAAIAATR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.1.1.- (68%) 1.1.1.2 (24%) 1.1.-.- (4%)" "With NAD(+) or NADP(+) as acceptor (68%) alcohol dehydrogenase (NADP(+)) (24%) Acting on the CH-OH group of donors (4%)" "GO:0000302 (0.1%) GO:0034605 (0.1%)" "GO:0005829 (19.7%) GO:0005737 (0.1%)" "GO:0008106 (19.7%) GO:1990002 (19.7%) GO:1990362 (19.7%)" "response to reactive oxygen species (0.1%) cellular response to heat (0.1%)" "cytosol (19.7%) cytoplasm (0.1%)" "alcohol dehydrogenase (NADP+) activity (19.7%) methylglyoxal reductase (NADPH) (acetol producing) activity (19.7%) butanol dehydrogenase (NAD+) activity (19.7%)" "IPR056798 (25.3%) IPR018211 (25.1%) IPR044731 (25.1%)" "Fe-containing alcohol dehydrogenase-like, C-terminal (25.3%) Alcohol dehydrogenase, iron-type, conserved site (25.1%) Butanol dehydrogenase-like (25.1%)" IGDTTITEIENR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (25%) IPR018211 (25%) IPR044731 (25%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (25%) Alcohol dehydrogenase, iron-type, conserved site (25%) Butanol dehydrogenase-like (25%)" TLGTAACPPYHIAFVIGGTSAEK Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20.1%) GO:0005829 (0.1%) "GO:0004333 (20.1%) GO:0046872 (20.1%) GO:0051539 (20.1%)" tricarboxylic acid cycle (20.1%) cytosol (0.1%) "fumarate hydratase activity (20.1%) metal ion binding (20.1%) 4 iron, 4 sulfur cluster binding (20.1%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" QIDANQGGNQR Bacteria Bacteria GO:0006950 (100%) response to stress (100%) "IPR051096 (20.1%) IPR010854 (20.1%) IPR025543 (20.1%)" "BhsA/McbA stress and biofilm-associated protein (20.1%) YdgH/BhsA/McbA-like domain (20.1%) Dodecin-like (20.1%)" NFSIDFENPHIAQVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.2.1.22 (50%) 3.2.1.- (25%) 3.2.1.0 (25%)" "alpha-galactosidase (50%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (25%) Unknown (25%)" GO:0005886 (9.1%) GO:0004557 (90.9%) plasma membrane (9.1%) alpha-galactosidase activity (90.9%) "IPR011050 (27%) IPR012334 (24.3%) IPR056441 (24.3%)" "Pectin lyase fold/virulence factor (27%) Pectin lyase fold (24.3%) GLAA-B, beta-barrel domain II (24.3%)" LVVATDTAFVPFEFK root "GO:0006865 (19.8%) GO:0006868 (0%) GO:1903803 (0%)" "GO:0016020 (26.6%) GO:0030288 (23.1%) GO:0030313 (3.1%)" "GO:0015276 (26.6%) GO:0016597 (0.1%) GO:0016787 (0%)" "amino acid transport (19.8%) glutamine transport (0%) L-glutamine import across plasma membrane (0%)" "membrane (26.6%) outer membrane-bounded periplasmic space (23.1%) cell envelope (3.1%)" "ligand-gated monoatomic ion channel activity (26.6%) amino acid binding (0.1%) hydrolase activity (0%)" "IPR001638 (25.4%) IPR001320 (24.8%) IPR018313 (24.8%)" "Solute-binding protein family 3/N-terminal domain of MltF (25.4%) Ionotropic glutamate receptor, C-terminal (24.8%) Solute-binding protein family 3, conserved site (24.8%)" ADLAEQSAVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20.1%) GO:0005524 (20%) GO:0016874 (0.1%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20.1%) ATP binding (20%) ligase activity (0.1%)" "IPR045864 (11.4%) IPR004499 (11.3%) IPR006195 (11.2%)" "Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.4%) Proline-tRNA ligase, class IIa, archaeal-type (11.3%) Aminoacyl-tRNA synthetase, class II (11.2%)" IEENKDNLPYLKETISLLRR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011990 (46.7%) IPR019734 (46.7%) IPR013105 (6.7%)" "Tetratricopeptide-like helical domain superfamily (46.7%) Tetratricopeptide repeat (46.7%) Tetratricopeptide repeat 2 (6.7%)" YMELTADIIDEYRNTGGFDMIGSGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" QSTPVDSYYTGIANR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR024214 (100%) Protein of unknown function DUF3843 (100%) HLNDDLKGVGESWEISGVENNESVVANGPDK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (16.7%) IPR014628 (16.7%) IPR014710 (16.7%)" "RmlC-like cupin domain superfamily (16.7%) Mannose-6-phosphate isomerase, Firmicutes type, short form (16.7%) RmlC-like jelly roll fold (16.7%)" KYVNDAQMK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.13 (100%) mannose-1-phosphate guanylyltransferase (100%) GO:0009298 (30.4%) "GO:0004475 (30.4%) GO:0005525 (30.4%) GO:0016853 (5.4%)" GDP-mannose biosynthetic process (30.4%) "mannose-1-phosphate guanylyltransferase (GTP) activity (30.4%) GTP binding (30.4%) isomerase activity (5.4%)" "IPR005835 (25%) IPR029044 (25%) IPR049577 (25%)" "Nucleotidyl transferase domain (25%) Nucleotide-diphospho-sugar transferases (25%) GDP-mannose pyrophosphorylase, N-terminal domain (25%)" KDDAELTAAFNK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (46.9%) GO:0006995 (0.4%) GO:0009267 (0.4%)" "GO:0030288 (47.3%) GO:0030313 (1.3%) GO:0016020 (0.4%)" "GO:0016597 (0.4%) GO:0016787 (0.4%)" "amino acid transport (46.9%) cellular response to nitrogen starvation (0.4%) cellular response to starvation (0.4%)" "outer membrane-bounded periplasmic space (47.3%) cell envelope (1.3%) membrane (0.4%)" "amino acid binding (0.4%) hydrolase activity (0.4%)" "IPR001638 (35.2%) IPR005768 (32.4%) IPR018313 (32.4%)" "Solute-binding protein family 3/N-terminal domain of MltF (35.2%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (32.4%) Solute-binding protein family 3, conserved site (32.4%)" KYTQEEIDELVAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0009263 (20%) GO:0071897 (20%)" "GO:0004748 (20%) GO:0005524 (20%) GO:0031419 (20%)" "deoxyribonucleotide biosynthetic process (20%) DNA biosynthetic process (20%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20%) ATP binding (20%) cobalamin binding (20%)" "IPR000788 (25%) IPR013344 (25%) IPR013509 (25%)" "Ribonucleotide reductase large subunit, C-terminal (25%) Ribonucleotide reductase, adenosylcobalamin-dependent (25%) Ribonucleotide reductase large subunit, N-terminal (25%)" KVDFITTNEPVQLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006629 (50%) "GO:0008081 (46.4%) GO:0008889 (3.6%)" lipid metabolic process (50%) "phosphoric diester hydrolase activity (46.4%) glycerophosphodiester phosphodiesterase activity (3.6%)" "IPR017946 (50%) IPR030395 (50%)" "PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily (50%) Glycerophosphodiester phosphodiesterase domain (50%)" EVLIMVNGHNK Bacteria Bacteria 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (13.9%) GO:0005737 (0.4%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (13.9%) cytoplasm (0.4%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" LHEIQAPSYNCNEAPIMDVNR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "4.2.1.59 (52.2%) 3.5.1.108 (47.8%)" "3-hydroxyacyl-[acyl-carrier-protein] dehydratase (52.2%) UDP-3-O-acyl-N-acetylglucosamine deacetylase (47.8%)" "GO:0006633 (14.5%) GO:0009245 (14.5%)" "GO:0005737 (14.5%) GO:0016020 (14.5%)" "GO:0019171 (14.5%) GO:0103117 (14.5%) GO:0046872 (13.3%)" "fatty acid biosynthetic process (14.5%) lipid A biosynthetic process (14.5%)" "cytoplasm (14.5%) membrane (14.5%)" "(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (14.5%) UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.5%) metal ion binding (13.3%)" "IPR004463 (14.5%) IPR010084 (14.5%) IPR011334 (14.5%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.5%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (14.5%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.5%)" SQVGTMFGTLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales ILNTSSVIPVDGLCVR root 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0019877 (11.1%) GO:0009088 (10.9%) GO:0009089 (10.9%)" GO:0005829 (0.1%) "GO:0004073 (11.2%) GO:0046983 (11.2%) GO:0050661 (11.1%)" "diaminopimelate biosynthetic process (11.1%) threonine biosynthetic process (10.9%) lysine biosynthetic process via diaminopimelate (10.9%)" cytosol (0.1%) "aspartate-semialdehyde dehydrogenase activity (11.2%) protein dimerization activity (11.2%) NADP binding (11.1%)" "IPR012280 (17.2%) IPR000319 (17.1%) IPR011534 (16.7%)" "Semialdehyde dehydrogenase, dimerisation domain (17.2%) Aspartate-semialdehyde dehydrogenase, conserved site (17.1%) Aspartate-semialdehyde dehydrogenase, gamma-type (16.7%)" IGDLCWAAGDQQAR root "1.2.4.1 (99.7%) 1.-.-.- (0.2%) 2.3.1.12 (0.2%)" "pyruvate dehydrogenase (acetyl-transferring) (99.7%) Oxidoreductases (0.2%) dihydrolipoyllysine-residue acetyltransferase (0.2%)" "GO:0006086 (0.1%) GO:0042867 (0.1%)" "GO:0045254 (0.2%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0000287 (47.9%) GO:0004739 (38.3%) GO:0016491 (12.2%)" "pyruvate decarboxylation to acetyl-CoA (0.1%) pyruvate catabolic process (0.1%)" "pyruvate dehydrogenase complex (0.2%) cytosol (0.1%) membrane (0.1%)" "magnesium ion binding (47.9%) pyruvate dehydrogenase (acetyl-transferring) activity (38.3%) oxidoreductase activity (12.2%)" "IPR041621 (12.8%) IPR051157 (12.8%) IPR029061 (12.7%)" "Pyruvate dehydrogenase E1 component, middle domain (12.8%) Pyruvate Dehydrogenase/Transketolase (12.8%) Thiamin diphosphate-binding fold (12.7%)" QKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETAR root 6.3.5.4 (100%) asparagine synthase (glutamine-hydrolyzing) (100%) "GO:0006529 (24.5%) GO:0070981 (0.4%) GO:0006541 (0.2%)" "GO:0005829 (24.7%) GO:0005737 (0.2%)" "GO:0004066 (24.7%) GO:0005524 (23.7%) GO:0016874 (0.6%)" "obsolete asparagine biosynthetic process (24.5%) L-asparagine biosynthetic process (0.4%) glutamine metabolic process (0.2%)" "cytosol (24.7%) cytoplasm (0.2%)" "asparagine synthase (glutamine-hydrolyzing) activity (24.7%) ATP binding (23.7%) ligase activity (0.6%)" "IPR001962 (14.9%) IPR014729 (14.9%) IPR050795 (14.9%)" "Asparagine synthase (14.9%) Rossmann-like alpha/beta/alpha sandwich fold (14.9%) Asparagine Synthetase (14.9%)" SRFDHFNINVTDLER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.4.1.5 (100%) lactoylglutathione lyase (100%) GO:0019243 (13.6%) GO:0005737 (13.6%) "GO:0016829 (27.3%) GO:0004462 (22.7%) GO:0051213 (22.7%)" methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (13.6%) cytoplasm (13.6%) "lyase activity (27.3%) lactoylglutathione lyase activity (22.7%) dioxygenase activity (22.7%)" "IPR004360 (27%) IPR029068 (27%) IPR037523 (27%)" "Glyoxalase/fosfomycin resistance/dioxygenase domain (27%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (27%) Vicinal oxygen chelate (VOC), core domain (27%)" TQTLTCYNGVMAEGCGHCPACK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.20 (100%) 7-cyano-7-deazaguanine synthase (100%) GO:0008616 (25%) "GO:0005524 (25%) GO:0008270 (25%) GO:0016879 (25%)" tRNA queuosine(34) biosynthetic process (25%) "ATP binding (25%) zinc ion binding (25%) ligase activity, forming carbon-nitrogen bonds (25%)" "IPR014729 (50%) IPR018317 (50%)" "Rossmann-like alpha/beta/alpha sandwich fold (50%) Queuosine biosynthesis protein QueC (50%)" IAGELLPCVFHVSAR root "1.2.7.1 (86.9%) 1.2.7.- (9.1%) 1.2.1.51 (3%)" "pyruvate synthase (86.9%) With an iron-sulfur protein as acceptor (9.1%) pyruvate dehydrogenase (NADP(+)) (3%)" "GO:0006979 (15.7%) GO:0022900 (15%) GO:0044281 (8.2%)" "GO:0051539 (15.3%) GO:0005506 (15%) GO:0030976 (14.6%)" "response to oxidative stress (15.7%) electron transport chain (15%) small molecule metabolic process (8.2%)" "4 iron, 4 sulfur cluster binding (15.3%) iron ion binding (15%) thiamine pyrophosphate binding (14.6%)" "IPR002880 (8%) IPR029061 (8%) IPR050722 (8%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (8%) Thiamin diphosphate-binding fold (8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (8%)" MATPDPMVTVGVQCQGFPVEMIVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" VILTPDNAQR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR021857 (100%) Protein of unknown function DUF3467 (100%) DSDIGKVIVDPFR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (32%) GO:1902600 (32%) GO:0006811 (1.3%)" "GO:0005524 (33.3%) GO:0016787 (1.3%)" "ATP metabolic process (32%) proton transmembrane transport (32%) monoatomic ion transport (1.3%)" "ATP binding (33.3%) hydrolase activity (1.3%)" "IPR000194 (20.2%) IPR022879 (20.2%) IPR027417 (20.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.2%) V-type ATP synthase regulatory subunit B/beta (20.2%) P-loop containing nucleoside triphosphate hydrolase (20.2%)" IINICSMMSELGR Bacteria Bacteria "1.1.1.69 (95.9%) 1.1.1.125 (1.9%) 1.1.1.391 (1.1%)" "gluconate 5-dehydrogenase (95.9%) 2-deoxy-D-gluconate 3-dehydrogenase (1.9%) 3beta-hydroxycholanate 3-dehydrogenase (NAD(+)) (1.1%)" "GO:0008206 (29.3%) GO:0006629 (1.8%) GO:0032787 (1.8%)" GO:0016020 (2.5%) "GO:0008874 (26.6%) GO:0016616 (21.9%) GO:0016491 (14%)" "bile acid metabolic process (29.3%) lipid metabolic process (1.8%) monocarboxylic acid metabolic process (1.8%)" membrane (2.5%) "gluconate 5-dehydrogenase activity (26.6%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (21.9%) oxidoreductase activity (14%)" "IPR002347 (32.6%) IPR020904 (32.5%) IPR036291 (32.5%)" "Short-chain dehydrogenase/reductase SDR (32.6%) Short-chain dehydrogenase/reductase, conserved site (32.5%) NAD(P)-binding domain superfamily (32.5%)" VKELVGLNDDIEGR Bacteria Bacteria 2.4.2.8 (100%) hypoxanthine phosphoribosyltransferase (100%) "GO:0006166 (10.4%) GO:0006178 (10.4%) GO:0032263 (10.4%)" GO:0005829 (10.4%) "GO:0000166 (10.4%) GO:0000287 (10.4%) GO:0004422 (10.4%)" "purine ribonucleoside salvage (10.4%) guanine salvage (10.4%) GMP salvage (10.4%)" cytosol (10.4%) "nucleotide binding (10.4%) magnesium ion binding (10.4%) hypoxanthine phosphoribosyltransferase activity (10.4%)" "IPR000836 (25%) IPR005904 (25%) IPR029057 (25%)" "Phosphoribosyltransferase domain (25%) Hypoxanthine phosphoribosyl transferase (25%) Phosphoribosyltransferase-like (25%)" ETGHVNAYFPLLIPK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%) GO:0016020 (0.1%)" "GO:0004827 (20%) GO:0005524 (20%) GO:0016874 (0.1%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%) membrane (0.1%)" "proline-tRNA ligase activity (20%) ATP binding (20%) ligase activity (0.1%)" "IPR004499 (11.3%) IPR045864 (11.3%) IPR006195 (11.3%)" "Proline-tRNA ligase, class IIa, archaeal-type (11.3%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.3%) Aminoacyl-tRNA synthetase, class II (11.3%)" VSFTAEQIRDNAKEFISTLNK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006412 (16.7%) GO:0006417 (16.7%)" GO:0015934 (16.7%) "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" "translation (16.7%) regulation of translation (16.7%)" large ribosomal subunit (16.7%) "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR002143 (16.7%) IPR005878 (16.7%) IPR016095 (16.7%)" "Large ribosomal subunit protein uL1 (16.7%) Large ribosomal subunit protein uL1, bacteria (16.7%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" VATQMGNQGNSFDWCR Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (94.6%) GO:0050112 (5.4%)" "nucleotide binding (94.6%) inositol 2-dehydrogenase (NAD+) activity (5.4%)" "IPR000683 (19.9%) IPR036291 (19.9%) IPR043906 (19.9%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (19.9%) NAD(P)-binding domain superfamily (19.9%) Gfo/Idh/MocA-like oxidoreductase, bacterial type, C-terminal (19.9%)" IIQKDTFEVIDGDPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0000166 (100%) nucleotide binding (100%) "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" TVTDKAPTPEEVEDMLFANK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (24.8%) GO:0005829 (24.8%) "GO:0003937 (24.8%) GO:0004643 (24.8%) GO:0016740 (0.6%)" 'de novo' IMP biosynthetic process (24.8%) cytosol (24.8%) "IMP cyclohydrolase activity (24.8%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (24.8%) transferase activity (0.6%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" VTTELLSDYYFNKYGVDTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.103 (66.7%) 5.1.3.- (33.3%)" "L-threonine 3-dehydrogenase (66.7%) Acting on carbohydrates and derivatives (33.3%)" GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" FVFPGEPIGVLTEEVQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.5 (100%) rhamnulokinase (100%) "GO:0006071 (19.5%) GO:0019301 (19.5%) GO:0005975 (0.8%)" GO:0005829 (19.5%) "GO:0004370 (19.5%) GO:0008993 (19.5%) GO:0016301 (0.8%)" "glycerol metabolic process (19.5%) rhamnose catabolic process (19.5%) carbohydrate metabolic process (0.8%)" cytosol (19.5%) "glycerol kinase activity (19.5%) rhamnulokinase activity (19.5%) kinase activity (0.8%)" "IPR018485 (25.5%) IPR043129 (25.5%) IPR013449 (24.5%)" "Carbohydrate kinase FGGY, C-terminal (25.5%) ATPase, nucleotide binding domain (25.5%) Rhamnulokinase (24.5%)" VKAALELAEQR root "GO:0042274 (19.7%) GO:0006412 (19.6%) GO:0006353 (0.1%)" "GO:0015935 (19.8%) GO:0005840 (0.5%) GO:0005737 (0%)" "GO:0019843 (19.8%) GO:0003735 (19.8%) GO:0016787 (0.3%)" "ribosomal small subunit biogenesis (19.7%) translation (19.6%) DNA-templated transcription termination (0.1%)" "small ribosomal subunit (19.8%) ribosome (0.5%) cytoplasm (0%)" "rRNA binding (19.8%) structural constituent of ribosome (19.8%) hydrolase activity (0.3%)" "IPR036986 (16.8%) IPR002942 (16.7%) IPR022801 (16.7%)" "RNA-binding S4 domain superfamily (16.8%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4 (16.7%)" FVYEPYWYNGIEYPKEQER Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae GO:0005980 (33.3%) "GO:0004134 (33.3%) GO:0004135 (33.3%)" glycogen catabolic process (33.3%) "4-alpha-glucanotransferase activity (33.3%) amylo-alpha-1,6-glucosidase activity (33.3%)" "IPR008928 (20%) IPR010401 (20%) IPR012341 (20%)" "Six-hairpin glycosidase superfamily (20%) Glycogen debranching enzyme (20%) Six-hairpin glycosidase-like superfamily (20%)" ATFDEANNCWR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.8.- (25%) 1.3.8.1 (25%) 1.3.8.7 (25%)" "With a flavin as acceptor (25%) short-chain acyl-CoA dehydrogenase (25%) medium-chain acyl-CoA dehydrogenase (25%)" "GO:0050660 (49.1%) GO:0003995 (47.3%) GO:0016937 (1.8%)" "flavin adenine dinucleotide binding (49.1%) acyl-CoA dehydrogenase activity (47.3%) short-chain fatty acyl-CoA dehydrogenase activity (1.8%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009075 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.1%)" YFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGR root "5.1.3.2 (99.6%) 5.1.3.7 (0.4%)" "UDP-glucose 4-epimerase (99.6%) UDP-N-acetylglucosamine 4-epimerase (0.4%)" "GO:0006012 (33%) GO:0005996 (0.2%) GO:0005975 (0%)" "GO:0005829 (33%) GO:0005737 (0%)" "GO:0003978 (33%) GO:0016853 (0.4%) GO:0016829 (0%)" "galactose metabolic process (33%) monosaccharide metabolic process (0.2%) carbohydrate metabolic process (0%)" "cytosol (33%) cytoplasm (0%)" "UDP-glucose 4-epimerase activity (33%) isomerase activity (0.4%) lyase activity (0%)" "IPR036291 (33.4%) IPR005886 (33.2%) IPR001509 (26.8%)" "NAD(P)-binding domain superfamily (33.4%) UDP-glucose 4-epimerase (33.2%) NAD-dependent epimerase/dehydratase (26.8%)" FAPSPTGALHIGGVR Bacteria Bacteria 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) "GO:0005829 (16.7%) GO:0005737 (0%)" "GO:0004818 (16.7%) GO:0005524 (16.7%) GO:0008270 (16.6%)" glutamyl-tRNA aminoacylation (16.7%) "cytosol (16.7%) cytoplasm (0%)" "glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%) zinc ion binding (16.6%)" "IPR001412 (9.7%) IPR020058 (9.7%) IPR049940 (9.7%)" "Aminoacyl-tRNA synthetase, class I, conserved site (9.7%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (9.7%) Glutamyl-Q tRNA(Asp) synthetase/Glutamate--tRNA ligase (9.7%)" GNIGVTTENIFPIIKK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0006457 (0.2%) GO:0006974 (0.2%) GO:0009408 (0.2%)" "GO:0005737 (6.6%) GO:0005829 (0.2%)" "GO:0005524 (22.6%) GO:0016887 (22.6%) GO:0051082 (22.6%)" "protein folding (0.2%) DNA damage response (0.2%) response to heat (0.2%)" "cytoplasm (6.6%) cytosol (0.2%)" "ATP binding (22.6%) ATP hydrolysis activity (22.6%) unfolded protein binding (22.6%)" "IPR001404 (18.2%) IPR019805 (18.2%) IPR020575 (18.2%)" "Heat shock protein Hsp90 family (18.2%) Heat shock protein Hsp90, conserved site (18.2%) Heat shock protein Hsp90, N-terminal (18.2%)" TAWENIIAPQLDAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006777 (33.4%) GO:0034214 (0.1%)" GO:0005829 (33.4%) "GO:0005525 (32.9%) GO:0016779 (0.1%) GO:0016829 (0.1%)" "Mo-molybdopterin cofactor biosynthetic process (33.4%) protein hexamerization (0.1%)" cytosol (33.4%) "GTP binding (32.9%) nucleotidyltransferase activity (0.1%) lyase activity (0.1%)" "IPR012245 (20.5%) IPR001453 (20.4%) IPR036425 (20.4%)" "Molybdenum cofactor biosynthesis protein MoaB (20.5%) MoaB/Mog domain (20.4%) MoaB/Mog-like domain superfamily (20.4%)" MGHAGAIIAGGK root "6.2.1.5 (75.6%) 6.2.1.4 (24.4%)" "succinate--CoA ligase (ADP-forming) (75.6%) succinate--CoA ligase (GDP-forming) (24.4%)" "GO:0006099 (17.2%) GO:0006606 (0.1%) GO:0006104 (0%)" "GO:0009361 (16.6%) GO:0005739 (8.5%) GO:0045244 (5.9%)" "GO:0004775 (17.2%) GO:0004776 (16.8%) GO:0000166 (16.7%)" "tricarboxylic acid cycle (17.2%) protein import into nucleus (0.1%) succinyl-CoA metabolic process (0%)" "succinate-CoA ligase complex (ADP-forming) (16.6%) mitochondrion (8.5%) succinate-CoA ligase complex (GDP-forming) (5.9%)" "succinate-CoA ligase (ADP-forming) activity (17.2%) succinate-CoA ligase (GDP-forming) activity (16.8%) nucleotide binding (16.7%)" "IPR016102 (14.3%) IPR017440 (14.3%) IPR005811 (14.3%)" "Succinyl-CoA synthetase-like (14.3%) ATP-citrate lyase/succinyl-CoA ligase, active site (14.3%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.3%)" FYVLNMFPYPSGAGLHVGHPLGYIASDIYAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.4 (100%) leucine--tRNA ligase (100%) GO:0006429 (19.9%) "GO:0005829 (19.9%) GO:0005739 (0.2%)" "GO:0004823 (20%) GO:0005524 (20%) GO:0002161 (19.8%)" leucyl-tRNA aminoacylation (19.9%) "cytosol (19.9%) mitochondrion (0.2%)" "leucine-tRNA ligase activity (20%) ATP binding (20%) aminoacyl-tRNA deacylase activity (19.8%)" "IPR001412 (12.6%) IPR002302 (12.6%) IPR014729 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.6%) Leucine-tRNA ligase (12.6%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" FNKEYWNYAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (19.3%) GO:0009263 (16.3%)" "GO:0004748 (22.1%) GO:0031419 (21.7%) GO:0005524 (16.3%)" "DNA biosynthetic process (19.3%) deoxyribonucleotide biosynthetic process (16.3%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (22.1%) cobalamin binding (21.7%) ATP binding (16.3%)" "IPR050862 (27.2%) IPR000788 (27%) IPR013344 (25.5%)" "Ribonucleoside diphosphate reductase class-2 (27.2%) Ribonucleotide reductase large subunit, C-terminal (27%) Ribonucleotide reductase, adenosylcobalamin-dependent (25.5%)" KLLPWIDGLLDAGEK root "4.1.2.13 (99.9%) 4.1.2.- (0.1%)" "fructose-bisphosphate aldolase (99.9%) Aldehyde-lyases (0.1%)" "GO:0006096 (20%) GO:0006094 (20%)" GO:0005829 (20%) "GO:0004332 (20%) GO:0008270 (20%) GO:0016829 (0.1%)" "glycolytic process (20%) gluconeogenesis (20%)" cytosol (20%) "fructose-bisphosphate aldolase activity (20%) zinc ion binding (20%) lyase activity (0.1%)" "IPR006411 (33.4%) IPR000771 (33.3%) IPR013785 (33.3%)" "Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype (33.4%) Fructose-bisphosphate aldolase, class-II (33.3%) Aldolase-type TIM barrel (33.3%)" LFSDFPAVSTEQWMEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (24.5%) "GO:0004494 (25.5%) GO:0031419 (25.5%) GO:0046872 (24.5%)" lactate fermentation to propionate and acetate (24.5%) "methylmalonyl-CoA mutase activity (25.5%) cobalamin binding (25.5%) metal ion binding (24.5%)" "IPR006099 (25.5%) IPR016176 (25.5%) IPR004608 (24.5%)" "Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25.5%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25.5%) Methylmalonyl-CoA mutase, small subunit (24.5%)" IANQFITMLPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.11.4 (96%) 3.4.11.- (4%)" "tripeptide aminopeptidase (96%) Aminopeptidases (4%)" "GO:0006508 (16.7%) GO:0043171 (15.9%) GO:0006518 (0.7%)" GO:0005829 (16.7%) "GO:0008237 (16.7%) GO:0008270 (16.7%) GO:0045148 (16.7%)" "proteolysis (16.7%) peptide catabolic process (15.9%) peptide metabolic process (0.7%)" cytosol (16.7%) "metallopeptidase activity (16.7%) zinc ion binding (16.7%) tripeptide aminopeptidase activity (16.7%)" "IPR001261 (20%) IPR002933 (20%) IPR010161 (20%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%) Peptidase M20 (20%) Peptidase M20B, tripeptide aminopeptidase (20%)" KAIGEAKDDDTADILTAASR root 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0006879 (14.1%) GO:0030261 (14.1%) GO:0006950 (0.2%)" "GO:0005737 (14.1%) GO:0009295 (13.6%) GO:0016020 (0.2%)" "GO:0008199 (14.3%) GO:0016722 (14.3%) GO:0003677 (14.1%)" "intracellular iron ion homeostasis (14.1%) chromosome condensation (14.1%) response to stress (0.2%)" "cytoplasm (14.1%) nucleoid (13.6%) membrane (0.2%)" "ferric iron binding (14.3%) oxidoreductase activity, acting on metal ions (14.3%) DNA binding (14.1%)" "IPR002177 (16.7%) IPR008331 (16.7%) IPR009078 (16.7%)" "DNA-binding protein Dps (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like superfamily (16.7%)" TVTGEDVSQENLGGASVHSTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.-.-.- (100%) Ligases (100%) GO:0015977 (22.2%) GO:0009317 (22.2%) "GO:0004658 (22.9%) GO:0003989 (22.2%) GO:0016740 (9.7%)" carbon fixation (22.2%) acetyl-CoA carboxylase complex (22.2%) "propionyl-CoA carboxylase activity (22.9%) acetyl-CoA carboxylase activity (22.2%) transferase activity (9.7%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" DIDFFSLCEHHMLPFFGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.4.16 (100%) GTP cyclohydrolase I (100%) "GO:0006729 (14.3%) GO:0046654 (14.3%) GO:0006730 (13.9%)" GO:0005737 (14.3%) "GO:0003934 (14.3%) GO:0005525 (14.3%) GO:0008270 (14.3%)" "tetrahydrobiopterin biosynthetic process (14.3%) tetrahydrofolate biosynthetic process (14.3%) one-carbon metabolic process (13.9%)" cytoplasm (14.3%) "GTP cyclohydrolase I activity (14.3%) GTP binding (14.3%) zinc ion binding (14.3%)" "IPR001474 (20%) IPR018234 (20%) IPR020602 (20%)" "GTP cyclohydrolase I (20%) GTP cyclohydrolase I, conserved site (20%) GTP cyclohydrolase I domain (20%)" QLEDAVGKEEAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" LADKPSYDEAATLAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0042777 (18.2%) "GO:0005886 (18.2%) GO:0045259 (18.2%)" "GO:0005524 (18.2%) GO:0046933 (18.2%) GO:0016787 (9.1%)" proton motive force-driven plasma membrane ATP synthesis (18.2%) "plasma membrane (18.2%) proton-transporting ATP synthase complex (18.2%)" "ATP binding (18.2%) proton-transporting ATP synthase activity, rotational mechanism (18.2%) hydrolase activity (9.1%)" "IPR000131 (50%) IPR035968 (50%)" "ATP synthase, F1 complex, gamma subunit (50%) ATP synthase, F1 complex, gamma subunit superfamily (50%)" AGDTITVAYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33%) "GO:0022625 (33%) GO:0005840 (1%)" GO:0003735 (33%) translation (33%) "cytosolic large ribosomal subunit (33%) ribosome (1%)" structural constituent of ribosome (33%) "IPR001857 (25.2%) IPR008991 (25.2%) IPR038657 (25.2%)" "Large ribosomal subunit protein bL19 (25.2%) Translation protein SH3-like domain superfamily (25.2%) Large ribosomal subunit protein bL19 superfamily (25.2%)" TAEDYLGQEVSEAVITVPAYFNDAQR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0005737 (17.8%) "GO:0005524 (27.4%) GO:0051082 (27.4%) GO:0140662 (27.4%)" cytoplasm (17.8%) "ATP binding (27.4%) unfolded protein binding (27.4%) ATP-dependent protein folding chaperone (27.4%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" VTPNMSTWRPCDQVESAVAWK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.2.1.1 (100%) transketolase (100%) "GO:0009052 (24.1%) GO:0006098 (0.8%)" "GO:0005829 (24.8%) GO:0016020 (0.4%)" "GO:0004802 (24.8%) GO:0046872 (24.7%) GO:0016740 (0.2%)" "pentose-phosphate shunt, non-oxidative branch (24.1%) pentose-phosphate shunt (0.8%)" "cytosol (24.8%) membrane (0.4%)" "transketolase activity (24.8%) metal ion binding (24.7%) transferase activity (0.2%)" "IPR005475 (11.3%) IPR033247 (11.3%) IPR020826 (11.3%)" "Transketolase-like, pyrimidine-binding domain (11.3%) Transketolase family (11.3%) Transketolase binding site (11.3%)" IEEALGEKAPYNGRK root 4.2.1.11 (100%) phosphopyruvate hydratase (100%) "GO:0006096 (16.8%) GO:0006396 (0%) GO:0006401 (0%)" "GO:0005576 (16.7%) GO:0000015 (16.7%) GO:0009986 (15.9%)" "GO:0004634 (16.7%) GO:0000287 (16.7%) GO:0016829 (0.2%)" "glycolytic process (16.8%) RNA processing (0%) RNA catabolic process (0%)" "extracellular region (16.7%) phosphopyruvate hydratase complex (16.7%) cell surface (15.9%)" "phosphopyruvate hydratase activity (16.7%) magnesium ion binding (16.7%) lyase activity (0.2%)" "IPR020810 (16.9%) IPR036849 (16.9%) IPR000941 (16.9%)" "Enolase, C-terminal TIM barrel domain (16.9%) Enolase-like, C-terminal domain superfamily (16.9%) Enolase (16.9%)" ELFAKPNVDGGLIGGASLAVDKFMPIIEAF Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" LSAVTVSCFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005996 (33.3%) GO:0005737 (33.3%) GO:0016861 (33.3%) monosaccharide metabolic process (33.3%) cytoplasm (33.3%) intramolecular oxidoreductase activity, interconverting aldoses and ketoses (33.3%) IPR009015 (100%) L-fucose isomerase, N-terminal/central domain superfamily (100%) ALADNKTDEAFNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006605 (19.2%) GO:0043952 (19.2%) GO:0065002 (19.2%)" GO:0005886 (20.8%) GO:0015450 (20%) "protein targeting (19.2%) protein transport by the Sec complex (19.2%) intracellular protein transmembrane transport (19.2%)" plasma membrane (20.8%) protein-transporting ATPase activity (20%) "IPR022813 (11.5%) IPR048631 (11.5%) IPR005665 (11%)" "Protein-export membrane protein SecD/SecF, archaeal and bacterial (11.5%) Protein translocase subunit SecDF, P1 domain, N-terminal (11.5%) Protein-export membrane protein SecF, bacterial (11%)" MNKAELINAMAAESGLSKVDSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" RADHVNKLWEIIDWDVVEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.15.1.1 (100%) superoxide dismutase (100%) GO:0005737 (33.3%) "GO:0004784 (33.3%) GO:0046872 (33.3%)" cytoplasm (33.3%) "superoxide dismutase activity (33.3%) metal ion binding (33.3%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" TGYVSTYPENDGDNDIYPTDPAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50%) GO:0046872 (50%)" "alkaline phosphatase activity (50%) metal ion binding (50%)" "IPR001952 (50%) IPR017850 (50%)" "Alkaline phosphatase (50%) Alkaline-phosphatase-like, core domain superfamily (50%)" HVASKNETASDLAIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0006633 (33.3%) GO:0044550 (33.3%)" GO:0004315 (33.3%) "fatty acid biosynthetic process (33.3%) secondary metabolite biosynthetic process (33.3%)" 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR013747 (33.3%) IPR013751 (33.3%) IPR016039 (33.3%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (33.3%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (33.3%) Thiolase-like (33.3%)" IGASAVILSPIASQERPQYR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.3.1.21 (91%) 2.1.2.- (9%)" "phosphoribosylglycinamide formyltransferase 2 (91%) Hydroxymethyl-, formyl- and related transferases (9%)" GO:0006189 (16.1%) GO:0005829 (16.9%) "GO:0005524 (16.9%) GO:0000287 (16.1%) GO:0004644 (16.1%)" 'de novo' IMP biosynthetic process (16.1%) cytosol (16.9%) "ATP binding (16.9%) magnesium ion binding (16.1%) phosphoribosylglycinamide formyltransferase activity (16.1%)" "IPR003135 (12.8%) IPR011054 (12.8%) IPR011761 (12.8%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.8%) Rudiment single hybrid motif (12.8%) ATP-grasp fold (12.8%)" KGEVVVVCGPSGSGK root "3.6.3.- (66.7%) 3.6.1.3 (8.6%) 3.6.3.21 (8.6%)" "Acting on acid anhydrides; catalyzing transmembrane movement of substances (66.7%) Deleted entry (8.6%) Transferred entry: 7.4.2.1 (8.6%)" "GO:0006865 (0.1%) GO:0006152 (0%) GO:0006206 (0%)" "GO:0005886 (24.8%) GO:0043190 (0%) GO:0016020 (0%)" "GO:0005524 (25.3%) GO:0016887 (25%) GO:0015424 (24.3%)" "amino acid transport (0.1%) purine nucleoside catabolic process (0%) pyrimidine nucleobase metabolic process (0%)" "plasma membrane (24.8%) ATP-binding cassette (ABC) transporter complex (0%) membrane (0%)" "ATP binding (25.3%) ATP hydrolysis activity (25%) ABC-type amino acid transporter activity (24.3%)" "IPR027417 (16.8%) IPR003439 (16.8%) IPR050086 (16.8%)" "P-loop containing nucleoside triphosphate hydrolase (16.8%) ABC transporter-like, ATP-binding domain (16.8%) Methionine import ATP-binding protein MetN-like (16.8%)" ATGSWLPDETMEVFKEYLIGIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.42 (100%) isocitrate dehydrogenase (NADP(+)) (100%) "GO:0006099 (20.7%) GO:0006097 (17.1%)" "GO:0004450 (20.7%) GO:0000287 (17.1%) GO:0051287 (17.1%)" "tricarboxylic acid cycle (20.7%) glyoxylate cycle (17.1%)" "isocitrate dehydrogenase (NADP+) activity (20.7%) magnesium ion binding (17.1%) NAD binding (17.1%)" "IPR004439 (35.4%) IPR024084 (35.4%) IPR019818 (29.2%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (35.4%) Isopropylmalate dehydrogenase-like domain (35.4%) Isocitrate/isopropylmalate dehydrogenase, conserved site (29.2%)" YGLGSKDTTPAQIIAVFK Bacteria Bacteria "1.2.7.1 (71.4%) 1.2.7.- (23.8%) 1.2.1.51 (4.8%)" "pyruvate synthase (71.4%) With an iron-sulfur protein as acceptor (23.8%) pyruvate dehydrogenase (NADP(+)) (4.8%)" "GO:0006979 (14.9%) GO:0022900 (14.7%) GO:0044281 (10.8%)" "GO:0005506 (14.7%) GO:0030976 (14.7%) GO:0051539 (14.7%)" "response to oxidative stress (14.9%) electron transport chain (14.7%) small molecule metabolic process (10.8%)" "iron ion binding (14.7%) thiamine pyrophosphate binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%)" "IPR002869 (7.8%) IPR009014 (7.8%) IPR019752 (7.8%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.8%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (7.8%)" KVIGIEYVPEAIEDAK Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.1.1.190 (76.7%) 2.1.1.- (17.1%) 2.1.1.189 (6.2%)" "23S rRNA (uracil(1939)-C(5))-methyltransferase (76.7%) Methyltransferases (17.1%) 23S rRNA (uracil(747)-C(5))-methyltransferase (6.2%)" "GO:0070475 (49.6%) GO:0032259 (0.3%)" GO:0016020 (0.3%) "GO:0070041 (49.6%) GO:0008168 (0.3%)" "rRNA base methylation (49.6%) methylation (0.3%)" membrane (0.3%) "rRNA (uridine-C5-)-methyltransferase activity (49.6%) methyltransferase activity (0.3%)" "IPR010280 (16.9%) IPR030390 (16.9%) IPR029063 (16.8%)" "(Uracil-5)-methyltransferase family (16.9%) RNA methyltransferase TrmA, active site (16.9%) S-adenosyl-L-methionine-dependent methyltransferase superfamily (16.8%)" ASALYTVHTPVPAGHDYFDEGLFGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0030170 (33.3%) GO:0008184 (32.4%) GO:0004645 (1%)" carbohydrate metabolic process (33.3%) "pyridoxal phosphate binding (33.3%) glycogen phosphorylase activity (32.4%) 1,4-alpha-oligoglucan phosphorylase activity (1%)" "IPR011834 (25.2%) IPR024517 (25.2%) IPR052182 (25.2%)" "Alpha-glucan phosphorylase (25.2%) Glycogen phosphorylase, domain of unknown function DUF3417 (25.2%) Glycogen_Maltodextrin_Phosphorylase (25.2%)" VCEFLGVDPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" HVEENEIERPEDIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.6.2.4 (89.8%) 3.6.4.12 (10.2%)" "DNA 3'-5' helicase (89.8%) DNA helicase (10.2%)" "GO:0006260 (8.3%) GO:0006281 (8.3%) GO:0006310 (8.3%)" "GO:0005737 (8.3%) GO:0030894 (8.3%) GO:0043590 (8.3%)" "GO:0003677 (8.3%) GO:0009378 (8.3%) GO:0016787 (8.3%)" "DNA replication (8.3%) DNA repair (8.3%) DNA recombination (8.3%)" "cytoplasm (8.3%) replisome (8.3%) bacterial nucleoid (8.3%)" "DNA binding (8.3%) four-way junction helicase activity (8.3%) hydrolase activity (8.3%)" "IPR001650 (7.2%) IPR002121 (7.2%) IPR004589 (7.2%)" "Helicase, C-terminal domain-like (7.2%) HRDC domain (7.2%) DNA helicase, ATP-dependent, RecQ type (7.2%)" WSVFFFYPADFTFVCPTELGDVADHYEELQK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "1.11.1.26 (99.2%) 1.11.1.15 (0.4%) 1.11.1.24 (0.2%)" "NADH-dependent peroxiredoxin (99.2%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (0.4%) thioredoxin-dependent peroxiredoxin (0.2%)" "GO:0006979 (14.6%) GO:0042744 (14.6%) GO:0045454 (14.6%)" "GO:0005829 (14.6%) GO:0005737 (0%) GO:0009321 (0%)" "GO:0008379 (14.6%) GO:0102039 (12.1%) GO:0004601 (0.1%)" "response to oxidative stress (14.6%) hydrogen peroxide catabolic process (14.6%) cell redox homeostasis (14.6%)" "cytosol (14.6%) cytoplasm (0%) alkyl hydroperoxide reductase complex (0%)" "thioredoxin peroxidase activity (14.6%) NADH-dependent peroxiredoxin activity (12.1%) peroxidase activity (0.1%)" "IPR000866 (14.4%) IPR036249 (14.4%) IPR050217 (14.4%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (14.4%) Thioredoxin-like superfamily (14.4%) Thiol-specific antioxidant peroxiredoxin (14.4%)" SHIPEELKKLEEMAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" SGVAHFAVDTEEDGLQLIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0015977 (23.2%) GO:0009317 (23.2%) "GO:0003989 (23.2%) GO:0004658 (23.2%) GO:0016740 (7.1%)" carbon fixation (23.2%) acetyl-CoA carboxylase complex (23.2%) "acetyl-CoA carboxylase activity (23.2%) propionyl-CoA carboxylase activity (23.2%) transferase activity (7.1%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" KIPLTPDEVEALR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.4.11.9 (97.4%) 3.4.-.- (2.6%)" "Xaa-Pro aminopeptidase (97.4%) Acting on peptide bonds (peptidases) (2.6%)" GO:0006508 (24%) "GO:0005829 (24%) GO:0016020 (4.5%)" "GO:0030145 (23.4%) GO:0070006 (23.4%) GO:0004177 (0.6%)" proteolysis (24%) "cytosol (24%) membrane (4.5%)" "manganese ion binding (23.4%) metalloaminopeptidase activity (23.4%) aminopeptidase activity (0.6%)" "IPR000994 (20.2%) IPR036005 (20.2%) IPR052433 (20.2%)" "Peptidase M24 (20.2%) Creatinase/aminopeptidase-like (20.2%) Xaa-Pro dipeptidase-like (20.2%)" EAALVHEALVAR root 3.5.4.16 (100%) GTP cyclohydrolase I (100%) "GO:0046654 (14.2%) GO:0006729 (14.1%) GO:0006730 (14%)" "GO:0005737 (14.1%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0003934 (14.6%) GO:0005525 (14.2%) GO:0008270 (14.1%)" "tetrahydrofolate biosynthetic process (14.2%) tetrahydrobiopterin biosynthetic process (14.1%) one-carbon metabolic process (14%)" "cytoplasm (14.1%) cytosol (0.1%) membrane (0.1%)" "GTP cyclohydrolase I activity (14.6%) GTP binding (14.2%) zinc ion binding (14.1%)" "IPR043134 (20.4%) IPR020602 (19.9%) IPR001474 (19.7%)" "GTP cyclohydrolase I, N-terminal domain (20.4%) GTP cyclohydrolase I domain (19.9%) GTP cyclohydrolase I (19.7%)" ILSAGIPVMGHLGLMPQSINK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.1.2.11 (100%) 3-methyl-2-oxobutanoate hydroxymethyltransferase (100%) "GO:0015940 (17.9%) GO:0032259 (14.2%)" GO:0005737 (17.9%) "GO:0000287 (17.9%) GO:0003864 (17.9%) GO:0008168 (14.2%)" "pantothenate biosynthetic process (17.9%) methylation (14.2%)" cytoplasm (17.9%) "magnesium ion binding (17.9%) 3-methyl-2-oxobutanoate hydroxymethyltransferase activity (17.9%) methyltransferase activity (14.2%)" "IPR003700 (33.3%) IPR015813 (33.3%) IPR040442 (33.3%)" "Ketopantoate hydroxymethyltransferase (33.3%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (33.3%) Pyruvate kinase-like domain superfamily (33.3%)" KVEELFDLRPK GGYSDNLSAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.3%) GO:0005829 (14.3%) "GO:0003723 (14.3%) GO:0004386 (14.3%) GO:0005524 (14.3%)" DNA-templated transcription termination (14.3%) cytosol (14.3%) "RNA binding (14.3%) helicase activity (14.3%) ATP binding (14.3%)" "IPR000194 (10.1%) IPR003593 (10.1%) IPR004665 (10.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%) AAA+ ATPase domain (10.1%) Transcription termination factor Rho (10.1%)" SMKPEQLVEKLFEEALK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (1.4%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (1.4%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" TIAELVEQFNLPIEK root 6.1.1.15 (100%) proline--tRNA ligase (100%) "GO:0006433 (20%) GO:0006412 (0%) GO:0106074 (0%)" "GO:0005829 (20%) GO:0005737 (0%)" "GO:0004827 (20%) GO:0005524 (19.9%) GO:0002161 (19.8%)" "prolyl-tRNA aminoacylation (20%) translation (0%) aminoacyl-tRNA metabolism involved in translational fidelity (0%)" "cytosol (20%) cytoplasm (0%)" "proline-tRNA ligase activity (20%) ATP binding (19.9%) aminoacyl-tRNA deacylase activity (19.8%)" "IPR045864 (7.8%) IPR050062 (7.8%) IPR002314 (7.8%)" "Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (7.8%) Proline-tRNA synthetase (7.8%) Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.8%)" FVIGGPHGDTGLTGR root 2.5.1.6 (100%) methionine adenosyltransferase (100%) "GO:0006556 (16.8%) GO:0006730 (16.7%)" "GO:0005737 (16.1%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0004478 (16.8%) GO:0005524 (16.8%) GO:0000287 (16%)" "S-adenosylmethionine biosynthetic process (16.8%) one-carbon metabolic process (16.7%)" "cytoplasm (16.1%) cytosol (0%) membrane (0%)" "methionine adenosyltransferase activity (16.8%) ATP binding (16.8%) magnesium ion binding (16%)" "IPR002133 (16.7%) IPR022630 (16.7%) IPR022631 (16.7%)" "S-adenosylmethionine synthetase (16.7%) S-adenosylmethionine synthetase, C-terminal (16.7%) S-adenosylmethionine synthetase, conserved site (16.7%)" MKPFIFGAR root "GO:0006412 (33.2%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (33.2%) GO:0005840 (0.3%) GO:0005737 (0%)" "GO:0003735 (33.2%) GO:0008270 (0%)" "translation (33.2%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (33.2%) ribosome (0.3%) cytoplasm (0%)" "structural constituent of ribosome (33.2%) zinc ion binding (0%)" "IPR001865 (25%) IPR005706 (25%) IPR023591 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25%)" LGQSSSTLSGGENQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.1.25.- (100%) Site-specific endodeoxyribonucleases specific for altered bases (100%) "GO:0006289 (12.1%) GO:0006281 (0.5%) GO:0006974 (0.1%)" "GO:0005737 (12.6%) GO:0009380 (12.1%) GO:0005829 (0.1%)" "GO:0003677 (12.6%) GO:0005524 (12.6%) GO:0016887 (12.6%)" "nucleotide-excision repair (12.1%) DNA repair (0.5%) DNA damage response (0.1%)" "cytoplasm (12.6%) excinuclease repair complex (12.1%) cytosol (0.1%)" "DNA binding (12.6%) ATP binding (12.6%) ATP hydrolysis activity (12.6%)" "IPR027417 (15.6%) IPR003439 (15.6%) IPR004602 (15%)" "P-loop containing nucleoside triphosphate hydrolase (15.6%) ABC transporter-like, ATP-binding domain (15.6%) UvrABC system subunit A (15%)" EIDKPFLMPVEDVFSITGR Bacteria Bacteria 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (17.7%) GO:0032045 (4.8%) GO:0005737 (1.1%)" "GO:0003746 (18.8%) GO:0005525 (18.8%) GO:0003924 (18.3%)" "cytosol (17.7%) guanyl-nucleotide exchange factor complex (4.8%) cytoplasm (1.1%)" "translation elongation factor activity (18.8%) GTP binding (18.8%) GTPase activity (18.3%)" "IPR004160 (8.6%) IPR004161 (8.6%) IPR009000 (8.6%)" "Translation elongation factor EFTu/EF1A, C-terminal (8.6%) Translation elongation factor EFTu-like, domain 2 (8.6%) Translation protein, beta-barrel domain superfamily (8.6%)" AVEDLTTYPSILGGR Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (24.9%) GO:0005829 (24.9%) "GO:0003937 (24.9%) GO:0004643 (24.9%) GO:0016740 (0.2%)" 'de novo' IMP biosynthetic process (24.9%) cytosol (24.9%) "IMP cyclohydrolase activity (24.9%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (24.9%) transferase activity (0.2%)" "IPR002695 (20.6%) IPR011607 (20.6%) IPR036914 (20.6%)" "Bifunctional purine biosynthesis protein PurH-like (20.6%) Methylglyoxal synthase-like domain (20.6%) Methylglyoxal synthase-like domain superfamily (20.6%)" FGINHISTGDVLR Bacteria Bacteria "2.7.4.3 (95.7%) 2.7.4.- (4.3%)" "adenylate kinase (95.7%) Phosphotransferases with a phosphate group as acceptor (4.3%)" "GO:0044209 (22.4%) GO:0006139 (1.2%)" GO:0005737 (22.4%) "GO:0005524 (27.1%) GO:0004017 (25.9%) GO:0019205 (1.2%)" "AMP salvage (22.4%) nucleobase-containing compound metabolic process (1.2%)" cytoplasm (22.4%) "ATP binding (27.1%) AMP kinase activity (25.9%) nucleobase-containing compound kinase activity (1.2%)" "IPR000850 (28%) IPR027417 (28%) IPR033690 (28%)" "Adenylate kinase/UMP-CMP kinase (28%) P-loop containing nucleoside triphosphate hydrolase (28%) Adenylate kinase, conserved site (28%)" QTDEVLENPDPR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "5.4.99.18 (94%) 4.1.1.21 (5.6%) 6.3.4.18 (0.4%)" "5-(carboxyamino)imidazole ribonucleotide mutase (94%) phosphoribosylaminoimidazole carboxylase (5.6%) 5-(carboxyamino)imidazole ribonucleotide synthase (0.4%)" GO:0006189 (35.7%) GO:0005829 (0.3%) "GO:0034023 (34.8%) GO:0016829 (26.6%) GO:0016853 (1%)" 'de novo' IMP biosynthetic process (35.7%) cytosol (0.3%) "5-(carboxyamino)imidazole ribonucleotide mutase activity (34.8%) lyase activity (26.6%) isomerase activity (1%)" "IPR000031 (33.5%) IPR024694 (33%) IPR033747 (32.4%)" "PurE domain (33.5%) PurE, prokaryotic type (33%) Class I PurE (32.4%)" GMVICHPGQVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (19.9%) GO:0032045 (0.6%)" "GO:0003746 (19.9%) GO:0003924 (19.9%) GO:0005525 (19.9%)" "cytosol (19.9%) guanyl-nucleotide exchange factor complex (0.6%)" "translation elongation factor activity (19.9%) GTPase activity (19.9%) GTP binding (19.9%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" LLGTSAWYAPGAAGAYVVESIIHDQKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25%) GO:0006099 (25%)" "GO:0004459 (25%) GO:0030060 (25%)" "lactate metabolic process (25%) tricarboxylic acid cycle (25%)" "L-lactate dehydrogenase (NAD+) activity (25%) L-malate dehydrogenase (NAD+) activity (25%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR011275 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 3 (16.7%)" TLAEGQRVEFEITNGAK root "GO:0010468 (0.2%) GO:0006139 (0.2%) GO:0006950 (0.2%)" "GO:0005829 (48.4%) GO:0005737 (0.3%) GO:0016020 (0.2%)" "GO:0003677 (28.4%) GO:0003676 (20.5%) GO:0001072 (0.1%)" "regulation of gene expression (0.2%) nucleobase-containing compound metabolic process (0.2%) response to stress (0.2%)" "cytosol (48.4%) cytoplasm (0.3%) membrane (0.2%)" "DNA binding (28.4%) nucleic acid binding (20.5%) transcription antitermination factor activity, RNA binding (0.1%)" "IPR002059 (16.7%) IPR011129 (16.7%) IPR012340 (16.7%)" "Cold-shock protein Csp, DNA-binding (16.7%) Cold-shock domain (16.7%) Nucleic acid-binding, OB-fold (16.7%)" VLESAIANAEHNDGADIDDLK root "GO:0006412 (24.8%) GO:0002181 (0.1%) GO:0046677 (0.1%)" "GO:0022625 (24.7%) GO:0005840 (0.4%) GO:0015934 (0.1%)" "GO:0003735 (24.8%) GO:0019843 (24.8%) GO:0003729 (0.1%)" "translation (24.8%) cytoplasmic translation (0.1%) response to antibiotic (0.1%)" "cytosolic large ribosomal subunit (24.7%) ribosome (0.4%) large ribosomal subunit (0.1%)" "structural constituent of ribosome (24.8%) rRNA binding (24.8%) mRNA binding (0.1%)" "IPR001063 (19.8%) IPR005727 (19.8%) IPR036394 (19.8%)" "Large ribosomal subunit protein uL22 (19.8%) Large ribosomal subunit protein uL22, bacterial/chloroplast-type (19.8%) Ribosomal protein uL22 superfamily (19.8%)" AAIAAAQANPNAK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "1.3.5.1 (97.3%) 1.3.5.4 (1.8%) 1.3.99.1 (0.9%)" "succinate dehydrogenase (97.3%) Transferred entry: 1.3.5.1 (1.8%) Deleted entry (0.9%)" "GO:0006113 (14.3%) GO:0009061 (14.3%) GO:0022900 (13.7%)" "GO:0005886 (14.3%) GO:0045283 (0%) GO:0005829 (0%)" "GO:0009055 (14.3%) GO:0050660 (14.3%) GO:0000104 (11.2%)" "fermentation (14.3%) anaerobic respiration (14.3%) electron transport chain (13.7%)" "plasma membrane (14.3%) fumarate reductase complex (0%) cytosol (0%)" "electron transfer activity (14.3%) flavin adenine dinucleotide binding (14.3%) succinate dehydrogenase activity (11.2%)" "IPR003953 (11.1%) IPR036188 (11.1%) IPR030664 (11%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (11.1%) FAD/NAD(P)-binding domain superfamily (11.1%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (11%)" ELTSRPISNVSSGLQGMMPGVTVTSGQGRPGQDGSTIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.5%) IPR008969 (12.5%) IPR012910 (12.5%)" "TonB-dependent receptor-like, beta-barrel (12.5%) Carboxypeptidase-like, regulatory domain superfamily (12.5%) TonB-dependent receptor, plug domain (12.5%)" GAERDIETATQTNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" VVSGGTDNHLFLVDLVDKNLTGK root 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (16.3%) GO:0035999 (15.4%) GO:0032259 (7.7%)" "GO:0005829 (16.3%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0004372 (16.3%) GO:0030170 (16.3%) GO:0008168 (7.7%)" "glycine biosynthetic process from serine (16.3%) tetrahydrofolate interconversion (15.4%) methylation (7.7%)" "cytosol (16.3%) cytoplasm (0.1%) membrane (0.1%)" "glycine hydroxymethyltransferase activity (16.3%) pyridoxal phosphate binding (16.3%) methyltransferase activity (7.7%)" "IPR015422 (14.5%) IPR015424 (14.5%) IPR039429 (14.5%)" "Pyridoxal phosphate-dependent transferase, small domain (14.5%) Pyridoxal phosphate-dependent transferase (14.5%) Serine hydroxymethyltransferase-like domain (14.5%)" QAIAESWPNSLDDTCAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.103 (50%) 4.2.1.47 (50%)" "L-threonine 3-dehydrogenase (50%) GDP-mannose 4,6-dehydratase (50%)" GO:0006567 (49.3%) "GO:0008743 (49.3%) GO:0016829 (1.3%)" L-threonine catabolic process (49.3%) "L-threonine 3-dehydrogenase activity (49.3%) lyase activity (1.3%)" "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" DKPEDAVLDVQGIATVTPAIVQACTQDK root "GO:1990451 (46.2%) GO:0071468 (2.7%) GO:0061077 (0.5%)" GO:0030288 (48.4%) "GO:0042802 (0.5%) GO:0042803 (0.5%) GO:0044183 (0.5%)" "cellular stress response to acidic pH (46.2%) cellular response to acidic pH (2.7%) obsolete chaperone-mediated protein folding (0.5%)" outer membrane-bounded periplasmic space (48.4%) "identical protein binding (0.5%) protein homodimerization activity (0.5%) protein folding chaperone (0.5%)" "IPR010486 (25.3%) IPR036831 (25.3%) IPR038303 (25.3%)" "HNS-dependent expression A/B (25.3%) HNS-dependent expression A superfamily (25.3%) HNS-dependent expression A/B superfamily (25.3%)" LGHADAVGPILQGIARPVNDLSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0008959 (53.8%) GO:0016407 (44.6%) GO:0016746 (1.5%)" "phosphate acetyltransferase activity (53.8%) acetyltransferase activity (44.6%) acyltransferase activity (1.5%)" "IPR002505 (16.7%) IPR004614 (16.7%) IPR012147 (16.7%)" "Phosphate acetyl/butaryl transferase (16.7%) Phosphate acetyltransferase (16.7%) Phosphate acetyl/butyryltransferase (16.7%)" TLGSIADLTR Bacteria Bacteria GO:0006412 (33.1%) "GO:0022627 (33.1%) GO:0005840 (0.6%)" GO:0003735 (33.1%) translation (33.1%) "cytosolic small ribosomal subunit (33.1%) ribosome (0.6%)" structural constituent of ribosome (33.1%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" VSHPEEIVQLDQK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (23.9%) "GO:0022627 (21.6%) GO:0005737 (2.2%) GO:0005840 (2.2%)" "GO:0003729 (23.9%) GO:0003735 (23.9%)" translation (23.9%) "cytosolic small ribosomal subunit (21.6%) cytoplasm (2.2%) ribosome (2.2%)" "mRNA binding (23.9%) structural constituent of ribosome (23.9%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" SNEQILGTPAIDAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.3.1.191 (100%) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase (100%) GO:0009245 (33.3%) GO:0016020 (33.3%) GO:0016410 (33.3%) lipid A biosynthetic process (33.3%) membrane (33.3%) N-acyltransferase activity (33.3%) "IPR001451 (25%) IPR007691 (25%) IPR011004 (25%)" "Hexapeptide repeat (25%) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD (25%) Trimeric LpxA-like superfamily (25%)" YDFQFENKR Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20.1%) GO:0009263 (17.8%)" "GO:0004748 (20.8%) GO:0031419 (20.8%) GO:0005524 (17.8%)" "DNA biosynthetic process (20.1%) deoxyribonucleotide biosynthetic process (17.8%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.8%) cobalamin binding (20.8%) ATP binding (17.8%)" "IPR050862 (26.1%) IPR000788 (26%) IPR013344 (25.6%)" "Ribonucleoside diphosphate reductase class-2 (26.1%) Ribonucleotide reductase large subunit, C-terminal (26%) Ribonucleotide reductase, adenosylcobalamin-dependent (25.6%)" ADANVLLLDEPTNDIDVNTLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.1.- (100%) In phosphorus-containing anhydrides (100%) "GO:0006412 (12.5%) GO:0045900 (12.5%)" GO:0005737 (12.5%) "GO:0000049 (12.5%) GO:0005524 (12.5%) GO:0016887 (12.5%)" "translation (12.5%) negative regulation of translational elongation (12.5%)" cytoplasm (12.5%) "tRNA binding (12.5%) ATP binding (12.5%) ATP hydrolysis activity (12.5%)" "IPR003439 (16.7%) IPR003593 (16.7%) IPR017871 (16.7%)" "ABC transporter-like, ATP-binding domain (16.7%) AAA+ ATPase domain (16.7%) ABC transporter-like, conserved site (16.7%)" YVTFDTQSNEETGTTPSTPGQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.11.4 (100%) tripeptide aminopeptidase (100%) "GO:0006508 (16.7%) GO:0043171 (16.7%)" GO:0005829 (16.7%) "GO:0008237 (16.7%) GO:0008270 (16.7%) GO:0045148 (16.7%)" "proteolysis (16.7%) peptide catabolic process (16.7%)" cytosol (16.7%) "metallopeptidase activity (16.7%) zinc ion binding (16.7%) tripeptide aminopeptidase activity (16.7%)" "IPR001261 (20%) IPR002933 (20%) IPR010161 (20%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%) Peptidase M20 (20%) Peptidase M20B, tripeptide aminopeptidase (20%)" YIDDVIEPR root "6.4.1.3 (54.1%) 6.-.-.- (43.2%) 4.1.1.41 (2.7%)" "propionyl-CoA carboxylase (54.1%) Ligases (43.2%) Transferred entry: 7.2.4.3 (2.7%)" "GO:0015977 (21.5%) GO:0006633 (1.4%)" "GO:0009317 (21.7%) GO:0005739 (0.1%) GO:0005886 (0.1%)" "GO:0004658 (23.6%) GO:0003989 (21.6%) GO:0016740 (9.2%)" "carbon fixation (21.5%) fatty acid biosynthetic process (1.4%)" "acetyl-CoA carboxylase complex (21.7%) mitochondrion (0.1%) plasma membrane (0.1%)" "propionyl-CoA carboxylase activity (23.6%) acetyl-CoA carboxylase activity (21.6%) transferase activity (9.2%)" "IPR034733 (19.9%) IPR051047 (19.8%) IPR011763 (19.8%)" "Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (19.9%) Acyl-CoA Carboxylase Beta Subunit (19.8%) Acetyl-coenzyme A carboxyltransferase, C-terminal (19.8%)" VYSGTINSGSYVLNSTK Bacillota Bacteria Bacillati Bacillota GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004540 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFG/EF2 (6.3%)" SDAYFVNDETHVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0000166 (25%) GO:0047850 (25%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "nucleotide binding (25%) diaminopimelate dehydrogenase activity (25%)" "IPR000683 (25%) IPR010190 (25%) IPR032094 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Diaminopimelate dehydrogenase, Ddh (25%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25%)" LEYFNPAGSVKDR root 2.5.1.47 (100%) cysteine synthase (100%) GO:0006535 (38.1%) GO:0005737 (22.3%) "GO:0004124 (37.4%) GO:0016846 (1%) GO:0016765 (0.6%)" cysteine biosynthetic process from serine (38.1%) cytoplasm (22.3%) "cysteine synthase activity (37.4%) carbon-sulfur lyase activity (1%) transferase activity, transferring alkyl or aryl (other than methyl) groups (0.6%)" "IPR001216 (16.7%) IPR001926 (16.7%) IPR050214 (16.7%)" "Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site (16.7%) Tryptophan synthase beta chain-like, PALP domain (16.7%) Cysteine synthase/Cystathionine beta-synthase (16.7%)" HQAYGVHLGQEDLQATDLNAIR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.5.1.3 (100%) thiamine phosphate synthase (100%) "GO:0009228 (20.1%) GO:0009229 (19.4%)" GO:0005737 (20.1%) "GO:0004789 (20.1%) GO:0000287 (18.7%) GO:0046872 (1.4%)" "thiamine biosynthetic process (20.1%) thiamine diphosphate biosynthetic process (19.4%)" cytoplasm (20.1%) "thiamine-phosphate diphosphorylase activity (20.1%) magnesium ion binding (18.7%) metal ion binding (1.4%)" "IPR013785 (25.1%) IPR022998 (25.1%) IPR036206 (25.1%)" "Aldolase-type TIM barrel (25.1%) Thiamine phosphate synthase/TenI (25.1%) Thiamin phosphate synthase superfamily (25.1%)" AIMTLNVYNYR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" NNDVCVVSVFVNPTQFNDKHDLETYPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.2.1 (100%) pantoate--beta-alanine ligase (AMP-forming) (100%) GO:0015940 (25%) GO:0005829 (25%) "GO:0004592 (25%) GO:0005524 (25%)" pantothenate biosynthetic process (25%) cytosol (25%) "pantoate-beta-alanine ligase activity (25%) ATP binding (25%)" "IPR003721 (33.3%) IPR014729 (33.3%) IPR042176 (33.3%)" "Pantoate-beta-alanine ligase (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (33.3%) Pantoate-beta-alanine ligase, C-terminal domain (33.3%)" TIIMPVDVFEMELSDK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006950 (12.5%) GO:1902021 (12.5%)" GO:0005737 (25%) "GO:0004017 (12.5%) GO:0004672 (12.5%) GO:0042803 (12.5%)" "response to stress (12.5%) regulation of bacterial-type flagellum-dependent cell motility (12.5%)" cytoplasm (25%) "AMP kinase activity (12.5%) protein kinase activity (12.5%) protein homodimerization activity (12.5%)" "IPR006016 (33.6%) IPR014729 (33.6%) IPR006015 (32.8%)" "UspA (33.6%) Rossmann-like alpha/beta/alpha sandwich fold (33.6%) Universal stress protein A family (32.8%)" GVVVAIDKDVVLVDAGLKSESAIPAEQFK root "GO:0006412 (24.7%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.6%) GO:0005840 (0.7%) GO:0005737 (0%)" "GO:0003729 (24.7%) GO:0003735 (24.7%) GO:0003676 (0.1%)" "translation (24.7%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.6%) ribosome (0.7%) cytoplasm (0%)" "mRNA binding (24.7%) structural constituent of ribosome (24.7%) nucleic acid binding (0.1%)" "IPR012340 (20.3%) IPR035104 (20.3%) IPR003029 (20.2%)" "Nucleic acid-binding, OB-fold (20.3%) Ribosomal protein S1-like (20.3%) S1 domain (20.2%)" VYSGVVNSGDTVLNSVK root 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0032790 (16.9%) GO:0006412 (0%) GO:0006414 (0%)" "GO:0005737 (15.8%) GO:0005829 (0.1%)" "GO:0003746 (17.2%) GO:0005525 (16.9%) GO:0003924 (16.4%)" "ribosome disassembly (16.9%) translation (0%) translational elongation (0%)" "cytoplasm (15.8%) cytosol (0.1%)" "translation elongation factor activity (17.2%) GTP binding (16.9%) GTPase activity (16.4%)" "IPR009000 (6.5%) IPR004161 (6.4%) IPR027417 (6.3%)" "Translation protein, beta-barrel domain superfamily (6.5%) Translation elongation factor EFTu-like, domain 2 (6.4%) P-loop containing nucleoside triphosphate hydrolase (6.3%)" FGKTESGNIWLDPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) "GO:0006437 (16.7%) GO:0043039 (0.1%)" GO:0005829 (16.7%) "GO:0004831 (16.7%) GO:0005524 (16.7%) GO:0003723 (16.6%)" "tyrosyl-tRNA aminoacylation (16.7%) tRNA aminoacylation (0.1%)" cytosol (16.7%) "tyrosine-tRNA ligase activity (16.7%) ATP binding (16.7%) RNA binding (16.6%)" "IPR002305 (12.6%) IPR002307 (12.6%) IPR024088 (12.6%)" "Aminoacyl-tRNA synthetase, class Ic (12.6%) Tyrosine-tRNA ligase (12.6%) Tyrosine-tRNA ligase, bacterial-type (12.6%)" GSPIQPTIDSLKGK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (47.1%) GO:0006995 (0.3%) GO:0009267 (0.3%)" "GO:0030288 (49.1%) GO:0030313 (0.9%) GO:0016020 (0.3%)" "GO:0016597 (0.3%) GO:0016787 (0.3%)" "amino acid transport (47.1%) cellular response to nitrogen starvation (0.3%) cellular response to starvation (0.3%)" "outer membrane-bounded periplasmic space (49.1%) cell envelope (0.9%) membrane (0.3%)" "amino acid binding (0.3%) hydrolase activity (0.3%)" "IPR001638 (34.2%) IPR018313 (33.1%) IPR005768 (32.7%)" "Solute-binding protein family 3/N-terminal domain of MltF (34.2%) Solute-binding protein family 3, conserved site (33.1%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (32.7%)" TFDTPTHPNSLALSADGK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0030288 (33.3%) "GO:0003677 (33.3%) GO:0017057 (33.3%)" outer membrane-bounded periplasmic space (33.3%) "DNA binding (33.3%) 6-phosphogluconolactonase activity (33.3%)" "IPR015943 (25.4%) IPR011048 (24.9%) IPR051200 (24.9%)" "WD40/YVTN repeat-like-containing domain superfamily (25.4%) Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily (24.9%) Multi-functional host-pathogen interaction and enzymatic activity protein (24.9%)" ALGITKEDIGKK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.4%) GO:0005737 (14.4%) "GO:0002161 (14.4%) GO:0004822 (14.4%) GO:0005524 (14.4%)" isoleucyl-tRNA aminoacylation (14.4%) cytoplasm (14.4%) "aminoacyl-tRNA deacylase activity (14.4%) isoleucine-tRNA ligase activity (14.4%) ATP binding (14.4%)" "IPR002300 (12.6%) IPR002301 (12.6%) IPR009008 (12.6%)" "Aminoacyl-tRNA synthetase, class Ia (12.6%) Isoleucine-tRNA ligase (12.6%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.6%)" VKTCQEIGFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.5.1.5 (50%) 3.5.4.9 (50%)" "methylenetetrahydrofolate dehydrogenase (NADP(+)) (50%) methenyltetrahydrofolate cyclohydrolase (50%)" "GO:0000105 (14.3%) GO:0006164 (14.3%) GO:0009086 (14.3%)" GO:0005829 (14.3%) "GO:0004477 (14.3%) GO:0004488 (14.3%)" "L-histidine biosynthetic process (14.3%) purine nucleotide biosynthetic process (14.3%) methionine biosynthetic process (14.3%)" cytosol (14.3%) "methenyltetrahydrofolate cyclohydrolase activity (14.3%) methylenetetrahydrofolate dehydrogenase (NADP+) activity (14.3%)" "IPR000672 (16.7%) IPR020630 (16.7%) IPR020631 (16.7%)" "Tetrahydrofolate dehydrogenase/cyclohydrolase (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (16.7%)" DGSSYEADCATHGAPLGGDAYVNTIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.2.1.1 (95.8%) 2.2.1.- (4.2%)" "transketolase (95.8%) Transketolases and transaldolases (4.2%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" IMDDIIDLELEKIEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20.6%) GO:0009263 (17.6%)" "GO:0004748 (20.6%) GO:0031419 (20.6%) GO:0005524 (17.6%)" "DNA biosynthetic process (20.6%) deoxyribonucleotide biosynthetic process (17.6%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.6%) cobalamin binding (20.6%) ATP binding (17.6%)" "IPR000788 (25.9%) IPR013344 (25.9%) IPR050862 (25.9%)" "Ribonucleotide reductase large subunit, C-terminal (25.9%) Ribonucleotide reductase, adenosylcobalamin-dependent (25.9%) Ribonucleoside diphosphate reductase class-2 (25.9%)" NLGNYINSITGR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.5.1.72 (100%) quinolinate synthase (100%) GO:0034628 (19.9%) GO:0005829 (19.9%) "GO:0008987 (19.9%) GO:0046872 (19.9%) GO:0051539 (19.9%)" 'de novo' NAD+ biosynthetic process from L-aspartate (19.9%) cytosol (19.9%) "quinolinate synthetase A activity (19.9%) metal ion binding (19.9%) 4 iron, 4 sulfur cluster binding (19.9%)" "IPR003473 (34.1%) IPR036094 (34.1%) IPR023066 (31.7%)" "Quinolinate synthetase A (34.1%) Quinolinate synthetase A superfamily (34.1%) Quinolinate synthase A, type 2 (31.7%)" ISVNTPIAQGLLGK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006354 (20%) GO:0032784 (20%)" "GO:0003677 (20%) GO:0003746 (20%) GO:0070063 (20%)" "DNA-templated transcription elongation (20%) regulation of DNA-templated transcription elongation (20%)" "DNA binding (20%) translation elongation factor activity (20%) RNA polymerase binding (20%)" "IPR001437 (12.8%) IPR023459 (12.8%) IPR036953 (12.8%)" "Transcription elongation factor, GreA/GreB, C-terminal (12.8%) Transcription elongation factor GreA/GreB family (12.8%) Transcription elongation factor GreA/GreB, C-terminal domain superfamily (12.8%)" MNKADLISAVAAEAGLSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0030261 (11.9%) GO:0006270 (10.4%) GO:0006351 (10.4%)" "GO:0005829 (11.9%) GO:1990103 (10.4%) GO:1990178 (10.4%)" "GO:0003677 (11.9%) GO:0030527 (11.9%) GO:0042802 (10.4%)" "chromosome condensation (11.9%) DNA replication initiation (10.4%) DNA-templated transcription (10.4%)" "cytosol (11.9%) DnaA-HU complex (10.4%) HU-DNA complex (10.4%)" "DNA binding (11.9%) structural constituent of chromatin (11.9%) identical protein binding (10.4%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" DKYVNTQELNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (16.5%) "GO:0005737 (16.5%) GO:0005886 (16.5%) GO:0012505 (0.8%)" "GO:0003924 (16.5%) GO:0005047 (16.5%) GO:0005525 (16.5%)" SRP-dependent cotranslational protein targeting to membrane (16.5%) "cytoplasm (16.5%) plasma membrane (16.5%) endomembrane system (0.8%)" "GTPase activity (16.5%) signal recognition particle binding (16.5%) GTP binding (16.5%)" "IPR000897 (14.7%) IPR013822 (14.7%) IPR027417 (14.7%)" "Signal recognition particle, SRP54 subunit, GTPase domain (14.7%) Signal recognition particle SRP54, helical bundle (14.7%) P-loop containing nucleoside triphosphate hydrolase (14.7%)" TLHPDNMGCGPASYGLTDTMGR Candidatus Caccopulliclostridium gallistercoris Bacteria Bacillati Bacillota Clostridia Candidatus Caccopulliclostridium Candidatus Caccopulliclostridium gallistercoris IPR025964 (100%) GGGtGRT protein (100%) YFNPIGAHPTALLGELPNGVPQNLIPYLTQTAIGIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.2%) GO:0005829 (33.2%) "GO:0003978 (33.2%) GO:0016853 (0.5%)" galactose metabolic process (33.2%) cytosol (33.2%) "UDP-glucose 4-epimerase activity (33.2%) isomerase activity (0.5%)" "IPR005886 (33.3%) IPR036291 (33.3%) IPR001509 (30%)" "UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD-dependent epimerase/dehydratase (30%)" FVNGELNQEIFDQVFGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.3%) GO:0043335 (16.3%) GO:0051083 (16.3%)" "GO:0003755 (16.3%) GO:0043022 (16.3%) GO:0044183 (16.3%)" "protein transport (16.3%) protein unfolding (16.3%) 'de novo' cotranslational protein folding (16.3%)" "peptidyl-prolyl cis-trans isomerase activity (16.3%) ribosome binding (16.3%) protein folding chaperone (16.3%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" IQAVPTFILFKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" NGGLGNGGTNFDAK Pseudomonadati Bacteria Pseudomonadati 5.3.1.5 (100%) xylose isomerase (100%) GO:0042732 (25.3%) GO:0005737 (24%) "GO:0009045 (25.3%) GO:0000287 (23.1%) GO:0046872 (2.3%)" D-xylose metabolic process (25.3%) cytoplasm (24%) "xylose isomerase activity (25.3%) magnesium ion binding (23.1%) metal ion binding (2.3%)" "IPR001998 (25.4%) IPR036237 (25.4%) IPR013452 (25.1%)" "Xylose isomerase (25.4%) Xylose isomerase-like superfamily (25.4%) Xylose isomerase, bacterial-type (25.1%)" QVAESPVGLIATTDDDFVYNKGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR041662 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like 2 (50%)" GMEEVTGEEDTYLR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.3.1.21 (100%) phosphoribosylglycinamide formyltransferase 2 (100%) GO:0006189 (16.3%) GO:0005829 (16.3%) "GO:0000287 (16.3%) GO:0004644 (16.3%) GO:0005524 (16.3%)" 'de novo' IMP biosynthetic process (16.3%) cytosol (16.3%) "magnesium ion binding (16.3%) phosphoribosylglycinamide formyltransferase activity (16.3%) ATP binding (16.3%)" "IPR003135 (12.5%) IPR005862 (12.5%) IPR011054 (12.5%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.5%) Formate-dependent phosphoribosylglycinamide formyltransferase (12.5%) Rudiment single hybrid motif (12.5%)" IGQNVADFLAADMKR Pseudomonadati Bacteria Pseudomonadati "2.8.3.- (90.2%) 3.1.2.1 (9.8%)" "CoA-transferases (90.2%) acetyl-CoA hydrolase (9.8%)" "GO:0006083 (25%) GO:0006084 (24.8%)" "GO:0003986 (25%) GO:0008775 (25%) GO:0016740 (0.2%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (24.8%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%) transferase activity (0.2%)" "IPR026888 (16.7%) IPR037171 (16.7%) IPR038460 (16.7%)" "Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%) NagB/RpiA transferase-like (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily (16.7%)" TKDAIVDYFIEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.1.1.173 (100%) 23S rRNA (guanine(2445)-N(2))-methyltransferase (100%) "GO:0003723 (33.3%) GO:0070043 (33.3%) GO:0008990 (27.3%)" "RNA binding (33.3%) rRNA (guanine-N7-)-methyltransferase activity (33.3%) rRNA (guanine-N2-)-methyltransferase activity (27.3%)" "IPR000241 (16.7%) IPR002052 (16.7%) IPR004114 (16.7%)" "Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain (16.7%) DNA methylase, N-6 adenine-specific, conserved site (16.7%) THUMP domain (16.7%)" YNSKLPIVVYTPDNVDVK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0006952 (0.4%) "GO:0042597 (47.2%) GO:0030288 (0.4%)" "GO:0004867 (51.5%) GO:0042803 (0.4%)" defense response (0.4%) "periplasmic space (47.2%) outer membrane-bounded periplasmic space (0.4%)" "serine-type endopeptidase inhibitor activity (51.5%) protein homodimerization activity (0.4%)" "IPR005658 (25.3%) IPR027438 (25.3%) IPR036198 (25.3%)" "Proteinase inhibitor I11, ecotin (25.3%) Ecotin, C-terminal (25.3%) Ecotin superfamily (25.3%)" ELNEALANEKPNCDVIICTPFIHLASVTPLVDAAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.4%) GO:0006096 (16.4%) GO:0019563 (16.4%)" "GO:0005829 (16.4%) GO:0016020 (0.7%)" GO:0004807 (16.4%) "gluconeogenesis (16.4%) glycolytic process (16.4%) glycerol catabolic process (16.4%)" "cytosol (16.4%) membrane (0.7%)" triose-phosphate isomerase activity (16.4%) "IPR000652 (19.8%) IPR013785 (19.8%) IPR020861 (19.8%)" "Triosephosphate isomerase (19.8%) Aldolase-type TIM barrel (19.8%) Triosephosphate isomerase, active site (19.8%)" EGIWIEKLDSHPGELIPEELR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" DKVETFNIGTGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) "GO:0006012 (31.1%) GO:0005996 (2.2%)" GO:0005829 (33.3%) GO:0003978 (33.3%) "galactose metabolic process (31.1%) monosaccharide metabolic process (2.2%)" cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR036291 (34.1%) IPR005886 (31.8%) IPR001509 (29.5%)" "NAD(P)-binding domain superfamily (34.1%) UDP-glucose 4-epimerase (31.8%) NAD-dependent epimerase/dehydratase (29.5%)" FGGQILDTVDIENYISVPKTEGQK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.8.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0000302 (14%) GO:0006979 (0.1%) GO:0042744 (0.1%)" "GO:0005829 (14%) GO:0032991 (13.9%) GO:0009321 (0.1%)" "GO:0016668 (14.3%) GO:0050660 (14.1%) GO:0051287 (14%)" "response to reactive oxygen species (14%) response to oxidative stress (0.1%) hydrogen peroxide catabolic process (0.1%)" "cytosol (14%) protein-containing complex (13.9%) alkyl hydroperoxide reductase complex (0.1%)" "oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (14.3%) flavin adenine dinucleotide binding (14.1%) NAD binding (14%)" "IPR036188 (11.6%) IPR023753 (11.5%) IPR050097 (11.5%)" "FAD/NAD(P)-binding domain superfamily (11.6%) FAD/NAD(P)-binding domain (11.5%) Ferredoxin--NADP reductase type 2 (11.5%)" SKSMEVIADALSGFNHSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" LIDLGVIIGSGYHVNPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0043200 (27.4%) GO:0005829 (27.4%) GO:0043565 (45.2%) response to amino acid (27.4%) cytosol (27.4%) sequence-specific DNA binding (45.2%) "IPR000485 (15.6%) IPR011008 (15.6%) IPR019887 (15.6%)" "AsnC-type HTH domain (15.6%) Dimeric alpha-beta barrel (15.6%) Transcription regulator AsnC/Lrp, ligand binding domain (15.6%)" FMGETWDQVQKETAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0005524 (33.3%) GO:0051082 (33.3%) GO:0140662 (33.3%)" "ATP binding (33.3%) unfolded protein binding (33.3%) ATP-dependent protein folding chaperone (33.3%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" NRPIEESLELFNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (25%) GO:0005829 (25%) "GO:0004819 (25%) GO:0005524 (25%)" glutaminyl-tRNA aminoacylation (25%) cytosol (25%) "glutamine-tRNA ligase activity (25%) ATP binding (25%)" "IPR001412 (10.2%) IPR004514 (10.2%) IPR020058 (10.2%)" "Aminoacyl-tRNA synthetase, class I, conserved site (10.2%) Glutamine-tRNA synthetase (10.2%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (10.2%)" LKKEDVLFIGGSDEHGVPITIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.8%) GO:0005829 (16.8%) "GO:0004825 (16.8%) GO:0005524 (16.8%) GO:0000049 (16.3%)" methionyl-tRNA aminoacylation (16.8%) cytosol (16.8%) "methionine-tRNA ligase activity (16.8%) ATP binding (16.8%) tRNA binding (16.3%)" "IPR001412 (8.4%) IPR014758 (8.4%) IPR015413 (8.4%)" "Aminoacyl-tRNA synthetase, class I, conserved site (8.4%) Methionyl-tRNA synthetase (8.4%) Methionyl/Leucyl tRNA synthetase (8.4%)" KKIIVCEYCGR Bacteroidota Bacteria Pseudomonadati Bacteroidota "IPR003743 (49.8%) IPR052376 (49.7%) IPR056003 (0.5%)" "C4-type zinc ribbon domain (49.8%) Oxidative Scavengers and Glycosyltransferases (49.7%) CT398-like coiled coil hairpin domain (0.5%)" AFRDVELEKEVLAAAQNIGLGAQFGGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" AVELIVEQIHR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.13 (100%) arabinose-5-phosphate isomerase (100%) GO:1901135 (39.6%) "GO:0097367 (39.6%) GO:0016853 (15.1%) GO:0019146 (5.7%)" carbohydrate derivative metabolic process (39.6%) "carbohydrate derivative binding (39.6%) isomerase activity (15.1%) arabinose-5-phosphate isomerase activity (5.7%)" "IPR001347 (33.3%) IPR035474 (33.3%) IPR046348 (33.3%)" "SIS domain (33.3%) KpsF-like, SIS domain (33.3%) SIS domain superfamily (33.3%)" DKLQLNYFTASK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.8.2.3 (100%) sulfide-cytochrome-c reductase (flavocytochrome c) (100%) GO:0070221 (29.2%) "GO:0070224 (29.2%) GO:0071949 (29.2%) GO:0070225 (12.5%)" sulfide oxidation, using sulfide:quinone oxidoreductase (29.2%) "sulfide:quinone oxidoreductase activity (29.2%) FAD binding (29.2%) sulfide dehydrogenase activity (12.5%)" "IPR006311 (25%) IPR015904 (25%) IPR023753 (25%)" "Twin-arginine translocation pathway, signal sequence (25%) Sulphide quinone-reductase (25%) FAD/NAD(P)-binding domain (25%)" KMGAQTAEANINAGIAAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.95 (73%) 1.1.1.290 (16.2%) 1.1.1.81 (8.1%)" "phosphoglycerate dehydrogenase (73%) 4-phosphoerythronate dehydrogenase (16.2%) hydroxypyruvate reductase (8.1%)" "GO:0051287 (49.7%) GO:0016616 (39.4%) GO:0004617 (7.6%)" "NAD binding (49.7%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (39.4%) phosphoglycerate dehydrogenase activity (7.6%)" "IPR006140 (29.4%) IPR036291 (29.2%) IPR006139 (29%)" "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (29.4%) NAD(P)-binding domain superfamily (29.2%) D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (29%)" SDKVDAEVLDAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.95 (83.3%) 1.1.1.290 (16.7%)" "phosphoglycerate dehydrogenase (83.3%) 4-phosphoerythronate dehydrogenase (16.7%)" "GO:0051287 (49.2%) GO:0016616 (41%) GO:0004617 (6.6%)" "NAD binding (49.2%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (41%) phosphoglycerate dehydrogenase activity (6.6%)" "IPR006140 (27.3%) IPR036291 (27.3%) IPR006139 (26.4%)" "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (27.3%) NAD(P)-binding domain superfamily (27.3%) D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (26.4%)" GYASNAANFEETHNVVAEIVKDFGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) GO:0006633 (33.3%) "GO:0004316 (33.3%) GO:0051287 (33.3%)" fatty acid biosynthetic process (33.3%) "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33.3%) NAD binding (33.3%)" "IPR002347 (16.7%) IPR011284 (16.7%) IPR020904 (16.7%)" "Short-chain dehydrogenase/reductase SDR (16.7%) 3-oxoacyl-(acyl-carrier-protein) reductase (16.7%) Short-chain dehydrogenase/reductase, conserved site (16.7%)" SMITPDFIGHTFAVHDGR Bacteria Bacteria "GO:0006412 (16.7%) GO:0000028 (16.6%)" "GO:0005737 (16.6%) GO:0015935 (16.6%) GO:0005840 (0.2%)" "GO:0003735 (16.7%) GO:0019843 (16.6%)" "translation (16.7%) ribosomal small subunit assembly (16.6%)" "cytoplasm (16.6%) small ribosomal subunit (16.6%) ribosome (0.2%)" "structural constituent of ribosome (16.7%) rRNA binding (16.6%)" "IPR002222 (25.1%) IPR023575 (25.1%) IPR005732 (24.9%)" "Small ribosomal subunit protein uS19 (25.1%) Small ribosomal subunit protein uS19, superfamily (25.1%) Small ribosomal subunit protein uS19, bacteria (24.9%)" LGHATAIGPILQGIARPVNDLSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0016407 (57.1%) GO:0008959 (42.9%)" "acetyltransferase activity (57.1%) phosphate acetyltransferase activity (42.9%)" "IPR002505 (16.7%) IPR004614 (16.7%) IPR012147 (16.7%)" "Phosphate acetyl/butaryl transferase (16.7%) Phosphate acetyltransferase (16.7%) Phosphate acetyl/butyryltransferase (16.7%)" LGLDEGKEVLILLK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0015689 (21.2%) GO:0006355 (18%) GO:0045892 (0.2%)" "GO:0005737 (18.7%) GO:0005829 (0.2%) GO:1990198 (0.2%)" "GO:0030151 (19.7%) GO:0003677 (19.5%) GO:0003700 (1.7%)" "molybdate ion transport (21.2%) regulation of DNA-templated transcription (18%) negative regulation of DNA-templated transcription (0.2%)" "cytoplasm (18.7%) cytosol (0.2%) ModE complex (0.2%)" "molybdenum ion binding (19.7%) DNA binding (19.5%) DNA-binding transcription factor activity (1.7%)" "IPR004606 (12.8%) IPR005116 (12.8%) IPR008995 (12.8%)" "Molybdenum-pterin binding domain (12.8%) Transport-associated OB, type 1 (12.8%) Molybdate/tungstate binding, C-terminal (12.8%)" VLPENWWQHPAALGATDSDIEIIKR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.-.-.- (100%) Hydrolases (100%) GO:0005829 (1%) GO:0016787 (99%) cytosol (1%) hydrolase activity (99%) "IPR036380 (33.7%) IPR000868 (33.3%) IPR050272 (33%)" "Isochorismatase-like superfamily (33.7%) Isochorismatase-like domain (33.3%) Isochorismatase-like hydrolase (33%)" EAGELCVSSISVDCATTLKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (24.5%) "GO:0022625 (22.4%) GO:0005840 (2%) GO:1990904 (2%)" "GO:0003735 (24.5%) GO:0019843 (24.5%)" translation (24.5%) "cytosolic large ribosomal subunit (22.4%) ribosome (2%) ribonucleoprotein complex (2%)" "structural constituent of ribosome (24.5%) rRNA binding (24.5%)" "IPR001063 (26.1%) IPR036394 (26.1%) IPR005727 (23.9%)" "Large ribosomal subunit protein uL22 (26.1%) Ribosomal protein uL22 superfamily (26.1%) Large ribosomal subunit protein uL22, bacterial/chloroplast-type (23.9%)" VFYNQAPLKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.1.1 (100%) asparaginase (100%) GO:0006528 (33.3%) "GO:0042597 (31.4%) GO:0030313 (2%)" GO:0004067 (33.3%) asparagine metabolic process (33.3%) "periplasmic space (31.4%) cell envelope (2%)" asparaginase activity (33.3%) "IPR004550 (11.3%) IPR006034 (11.3%) IPR027473 (11.3%)" "L-asparaginase, type II (11.3%) Asparaginase/glutaminase-like (11.3%) L-asparaginase, C-terminal (11.3%)" EMCPYQTLNQR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006417 (49.6%) GO:0022611 (0.1%) GO:0032055 (0.1%)" GO:0005737 (49.6%) "GO:0019843 (0.1%) GO:0043022 (0.1%) GO:0043024 (0.1%)" "regulation of translation (49.6%) dormancy process (0.1%) negative regulation of translation in response to stress (0.1%)" cytoplasm (49.6%) "rRNA binding (0.1%) ribosome binding (0.1%) ribosomal small subunit binding (0.1%)" "IPR007040 (50%) IPR023200 (50%)" "Ribosome modulation factor (50%) Ribosome modulation factor domain superfamily (50%)" GGPGLGTIQPSQADYFQTVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.7 (32.8%) 1.2.7.3 (31.3%) 1.2.7.1 (23.4%)" "3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) (32.8%) 2-oxoglutarate synthase (31.3%) pyruvate synthase (23.4%)" "GO:0016491 (72.4%) GO:0043807 (11.3%) GO:0019164 (8.4%)" "oxidoreductase activity (72.4%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity (11.3%) pyruvate synthase activity (8.4%)" "IPR002880 (20.1%) IPR029061 (20.1%) IPR052368 (20.1%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20.1%) Thiamin diphosphate-binding fold (20.1%) 2-oxoacid oxidoreductase subunit (20.1%)" TQGGYIPVHDKSDPDVIYSLFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003676 (100%) nucleic acid binding (100%) "IPR003029 (16.7%) IPR012340 (16.7%) IPR014464 (16.7%)" "S1 domain (16.7%) Nucleic acid-binding, OB-fold (16.7%) Conserved virulence factor B (16.7%)" GNVMYEMNVQGVAVSAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR025347 (100%) Protein of unknown function DUF4251 (100%) TLRGELPLEVQDLEDEVAGLSTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" TLEEVLALPMGDATVAQAVTDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" IVELPLNEEEKAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.37 (94.4%) 1.1.1.- (5.6%)" "malate dehydrogenase (94.4%) With NAD(+) or NADP(+) as acceptor (5.6%)" "GO:0006089 (24.6%) GO:0006099 (24.6%)" "GO:0004459 (24.6%) GO:0030060 (24.6%) GO:0016616 (1.5%)" "lactate metabolic process (24.6%) tricarboxylic acid cycle (24.6%)" "L-lactate dehydrogenase (NAD+) activity (24.6%) L-malate dehydrogenase (NAD+) activity (24.6%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (1.5%)" "IPR022383 (17.9%) IPR001236 (16.8%) IPR011275 (16.8%)" "Lactate/malate dehydrogenase, C-terminal (17.9%) Lactate/malate dehydrogenase, N-terminal (16.8%) Malate dehydrogenase, type 3 (16.8%)" NVTAGANPMDLKR root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (20.1%) GO:0009408 (0.1%) GO:0051085 (0%)" "GO:0005737 (11.7%) GO:0009986 (0.1%) GO:0042603 (0.1%)" "GO:0005524 (20.1%) GO:0140662 (20.1%) GO:0016853 (15.8%)" "protein refolding (20.1%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (11.7%) cell surface (0.1%) capsule (0.1%)" "ATP binding (20.1%) ATP-dependent protein folding chaperone (20.1%) isomerase activity (15.8%)" "IPR001844 (17.9%) IPR002423 (17.9%) IPR027413 (17.8%)" "Chaperonin Cpn60/GroEL (17.9%) Chaperonin Cpn60/GroEL/TCP-1 family (17.9%) GroEL-like equatorial domain superfamily (17.8%)" LLLSEACPLILDYHVALDNAR root 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.6%) GO:0046040 (16.6%) GO:0006164 (0%)" "GO:0005737 (16.6%) GO:0016020 (0.1%) GO:0005829 (0%)" "GO:0004019 (16.6%) GO:0005525 (16.6%) GO:0000287 (15.7%)" "'de novo' AMP biosynthetic process (16.6%) IMP metabolic process (16.6%) purine nucleotide biosynthetic process (0%)" "cytoplasm (16.6%) membrane (0.1%) cytosol (0%)" "adenylosuccinate synthase activity (16.6%) GTP binding (16.6%) magnesium ion binding (15.7%)" "IPR001114 (14.6%) IPR027417 (14.6%) IPR033128 (14.5%)" "Adenylosuccinate synthetase (14.6%) P-loop containing nucleoside triphosphate hydrolase (14.6%) Adenylosuccinate synthase, active site (14.5%)" AAYLNTGVWAK Pseudomonadati Bacteria Pseudomonadati 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20.1%) GO:0008615 (19.2%)" "GO:0005737 (20.1%) GO:0016020 (0.2%)" "GO:0004648 (20.1%) GO:0030170 (20.1%) GO:0008483 (0.3%)" "L-serine biosynthetic process (20.1%) pyridoxine biosynthetic process (19.2%)" "cytoplasm (20.1%) membrane (0.2%)" "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20.1%) pyridoxal phosphate binding (20.1%) transaminase activity (0.3%)" "IPR022278 (19.7%) IPR000192 (19.5%) IPR015421 (19.5%)" "Phosphoserine aminotransferase (19.7%) Aminotransferase class V domain (19.5%) Pyridoxal phosphate-dependent transferase, major domain (19.5%)" ERQNFAQEVINVICHYR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 4.1.3.3 (100%) N-acetylneuraminate lyase (100%) GO:0005737 (50%) "GO:0016829 (44.7%) GO:0008747 (5.3%)" cytoplasm (50%) "lyase activity (44.7%) N-acetylneuraminate lyase activity (5.3%)" "IPR002220 (50%) IPR013785 (50%)" "DapA-like (50%) Aldolase-type TIM barrel (50%)" SFAQLFEESLKEIETRPGSIVR root "GO:0006412 (24.7%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.7%) GO:0005840 (0.6%) GO:0005737 (0%)" "GO:0003729 (24.7%) GO:0003735 (24.7%) GO:0003676 (0.1%)" "translation (24.7%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.7%) ribosome (0.6%) cytoplasm (0%)" "mRNA binding (24.7%) structural constituent of ribosome (24.7%) nucleic acid binding (0.1%)" "IPR012340 (20.2%) IPR035104 (20.2%) IPR003029 (20.2%)" "Nucleic acid-binding, OB-fold (20.2%) Ribosomal protein S1-like (20.2%) S1 domain (20.2%)" GDKVQLIGFGNFEVR Bacillota Bacteria Bacillati Bacillota "GO:0030261 (11.1%) GO:0006270 (11.1%) GO:0010467 (11.1%)" "GO:0005829 (11.1%) GO:1990103 (11.1%) GO:1990178 (11.1%)" "GO:0003677 (11.3%) GO:0030527 (11.1%) GO:0042802 (11.1%)" "chromosome condensation (11.1%) DNA replication initiation (11.1%) gene expression (11.1%)" "cytosol (11.1%) DnaA-HU complex (11.1%) HU-DNA complex (11.1%)" "DNA binding (11.3%) structural constituent of chromatin (11.1%) identical protein binding (11.1%)" "IPR000119 (33.7%) IPR010992 (33.7%) IPR020816 (32.5%)" "Histone-like DNA-binding protein (33.7%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.7%) Histone-like DNA-binding protein, conserved site (32.5%)" IVGVNQVPIVWK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.4.1.11 (100%) glycogen(starch) synthase (100%) GO:0009103 (50%) "GO:0016757 (38.9%) GO:0004373 (11.1%)" lipopolysaccharide biosynthetic process (50%) "glycosyltransferase activity (38.9%) alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (11.1%)" "IPR001296 (50%) IPR028098 (50%)" "Glycosyl transferase, family 1 (50%) Glycosyltransferase subfamily 4-like, N-terminal domain (50%)" TDKPVLYYPLDSWFIR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.4%) GO:0005737 (14.2%) "GO:0004822 (14.4%) GO:0005524 (14.4%) GO:0002161 (14.3%)" isoleucyl-tRNA aminoacylation (14.4%) cytoplasm (14.2%) "isoleucine-tRNA ligase activity (14.4%) ATP binding (14.4%) aminoacyl-tRNA deacylase activity (14.3%)" "IPR002300 (12.6%) IPR023586 (12.6%) IPR014729 (12.6%)" "Aminoacyl-tRNA synthetase, class Ia (12.6%) Isoleucine-tRNA ligase, type 2 (12.6%) Rossmann-like alpha/beta/alpha sandwich fold (12.6%)" STLSSVLVGNPAFEVTEGEVIFNGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003439 (25%) IPR003593 (25%) IPR010230 (25%)" "ABC transporter-like, ATP-binding domain (25%) AAA+ ATPase domain (25%) FeS cluster assembly SUF system, ATPase SufC (25%)" AKEIIATVSAEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006414 (0.4%) GO:0005737 (49.3%) GO:0003746 (50.2%) translational elongation (0.4%) cytoplasm (49.3%) translation elongation factor activity (50.2%) "IPR001816 (20.1%) IPR014039 (20.1%) IPR036402 (20.1%)" "Translation elongation factor EFTs/EF1B (20.1%) Translation elongation factor EFTs/EF1B, dimerisation (20.1%) Elongation factor Ts, dimerisation domain superfamily (20.1%)" SMEVSSHVSPIAALGFVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.4.25 (100%) (d)CMP kinase (100%) "GO:0006220 (17.6%) GO:0015949 (17.6%)" GO:0005829 (17.6%) "GO:0005524 (17.6%) GO:0036431 (17.6%) GO:0036430 (11.2%)" "pyrimidine nucleotide metabolic process (17.6%) nucleobase-containing small molecule interconversion (17.6%)" cytosol (17.6%) "ATP binding (17.6%) dCMP kinase activity (17.6%) CMP kinase activity (11.2%)" "IPR003136 (33.3%) IPR011994 (33.3%) IPR027417 (33.3%)" "Cytidylate kinase (33.3%) Cytidylate kinase domain (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" TDYTMFGIRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.135 (100%) neopullulanase (100%) GO:0009313 (47.1%) "GO:0004556 (47.1%) GO:0031216 (5.9%)" oligosaccharide catabolic process (47.1%) "alpha-amylase activity (47.1%) neopullulanase activity (5.9%)" "IPR006047 (33.3%) IPR013780 (33.3%) IPR017853 (33.3%)" "Glycosyl hydrolase family 13, catalytic domain (33.3%) Glycosyl hydrolase, all-beta (33.3%) Glycoside hydrolase superfamily (33.3%)" NAELDEMMGTFNEVQEGFRK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis AKELNSDAIKEWKDLVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (52%) IPR019734 (48%)" "Tetratricopeptide-like helical domain superfamily (52%) Tetratricopeptide repeat (48%)" AGLEDYFIEQERYNMTPLQAMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR006311 (20%) IPR013022 (20%) IPR019546 (20%)" "Twin-arginine translocation pathway, signal sequence (20%) Xylose isomerase-like, TIM barrel domain (20%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (20%)" HIYAQVIAPNGSEVLVAASTVEK root "GO:0006412 (24.8%) GO:0002181 (0%)" "GO:0022625 (24.7%) GO:0005840 (0.7%) GO:1990904 (0.2%)" "GO:0003735 (24.9%) GO:0008097 (24.7%)" "translation (24.8%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.7%) ribosome (0.7%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (24.9%) 5S rRNA binding (24.7%)" "IPR005484 (34.2%) IPR004389 (34.1%) IPR057268 (31.5%)" "Large ribosomal subunit protein uL18, bacterial/plantae/animalia (34.2%) Large ribosomal subunit protein uL18, bacteria (34.1%) Large ribosomal subunit protein uL18 (31.5%)" INDKHFEVIVR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) "GO:0000428 (17%) GO:0031981 (0.1%)" "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (15.3%)" DNA-templated transcription (17%) "DNA-directed RNA polymerase complex (17%) nuclear lumen (0.1%)" "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (15.3%)" "IPR007081 (9.6%) IPR045867 (9.6%) IPR038120 (9.3%)" "RNA polymerase Rpb1, domain 5 (9.6%) DNA-directed RNA polymerase, subunit beta-prime (9.6%) RNA polymerase Rpb1, funnel domain superfamily (9.3%)" NVVVERPIQLVNIFR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR011542 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufD (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" GTSTVFAICYNPR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (8.6%) "GO:0000287 (18.3%) GO:0004743 (18.3%) GO:0005524 (18.3%)" response to stress (8.6%) "magnesium ion binding (18.3%) pyruvate kinase activity (18.3%) ATP binding (18.3%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" NNREFDNLSKEIEFQGLEIEFSEKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" GVVVDKPIQLVNILR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR011542 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufD (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" VHPDVISVQAMLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.3.1 (45%) 6.4.1.1 (30%) 4.1.1.112 (20%)" "methylmalonyl-CoA carboxytransferase (45%) pyruvate carboxylase (30%) oxaloacetate decarboxylase (20%)" GO:0006094 (16.4%) GO:0005737 (16.4%) "GO:0003824 (39.7%) GO:0004736 (17.8%) GO:0047154 (5.5%)" gluconeogenesis (16.4%) cytoplasm (16.4%) "catalytic activity (39.7%) pyruvate carboxylase activity (17.8%) methylmalonyl-CoA carboxytransferase activity (5.5%)" "IPR000891 (24.2%) IPR013785 (24.2%) IPR003379 (24%)" "Pyruvate carboxyltransferase (24.2%) Aldolase-type TIM barrel (24.2%) Carboxylase, conserved domain (24%)" VELENGHVVTAHISGK root "GO:0005829 (24.9%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0003743 (25.1%) GO:0043022 (24.9%) GO:0019843 (24.6%)" "cytosol (24.9%) cytoplasm (0%) membrane (0%)" "translation initiation factor activity (25.1%) ribosome binding (24.9%) rRNA binding (24.6%)" "IPR004368 (25.6%) IPR006196 (25.6%) IPR012340 (25.6%)" "Translation initiation factor IF-1 (25.6%) RNA-binding domain, S1, IF1 type (25.6%) Nucleic acid-binding, OB-fold (25.6%)" GLGNIKPQYLISVAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) GKGAPEGFVAPVTPGR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20.1%) "GO:0022625 (20.1%) GO:0005840 (0.3%)" "GO:0003735 (20.1%) GO:0019843 (20.1%) GO:0000049 (19.4%)" translation (20.1%) "cytosolic large ribosomal subunit (20.1%) ribosome (0.3%)" "structural constituent of ribosome (20.1%) rRNA binding (20.1%) tRNA binding (19.4%)" "IPR000114 (20%) IPR016180 (20%) IPR020798 (20%)" "Large ribosomal subunit protein uL16, bacteria (20%) Large ribosomal subunit protein uL16 domain (20%) Large ribosomal subunit protein uL16, conserved site (20%)" LLDYLIKTDIER Bacteria Bacteria GO:0006412 (25%) GO:0022627 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000589 (33.3%) IPR005290 (33.3%) IPR009068 (33.3%)" "Small ribosomal subunit protein uS15 (33.3%) Small ribosomal subunit protein uS15, bacteria (33.3%) uS15/NS1, RNA-binding domain superfamily (33.3%)" VENPRDEMAAIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (24.9%) GO:0005829 (24.9%) "GO:0004819 (24.9%) GO:0005524 (24.9%) GO:0016874 (0.4%)" glutaminyl-tRNA aminoacylation (24.9%) cytosol (24.9%) "glutamine-tRNA ligase activity (24.9%) ATP binding (24.9%) ligase activity (0.4%)" "IPR020059 (10.3%) IPR049437 (10.3%) IPR050132 (10.3%)" "Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain (10.3%) tRNA synthetases class I (E and Q), anti-codon binding domain (10.3%) Glutamine/Glutamate--tRNA Ligase (10.3%)" DDIASFLPVYLEKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.7.9.1 (99.6%) 2.7.-.- (0.4%)" "pyruvate, phosphate dikinase (99.6%) Transferring phosphorus-containing groups (0.4%)" "GO:0050242 (25.5%) GO:0016301 (25.4%) GO:0005524 (24.6%)" "pyruvate, phosphate dikinase activity (25.5%) kinase activity (25.4%) ATP binding (24.6%)" "IPR000121 (10.2%) IPR010121 (10.2%) IPR023151 (10.2%)" "PEP-utilising enzyme, C-terminal (10.2%) Pyruvate, phosphate dikinase (10.2%) PEP-utilising enzyme, conserved site (10.2%)" LEGNNAELGAK root "6.2.1.5 (99.9%) 6.2.1.- (0.1%) 6.2.1.4 (0.1%)" "succinate--CoA ligase (ADP-forming) (99.9%) Acid--thiol ligases (0.1%) succinate--CoA ligase (GDP-forming) (0.1%)" "GO:0006099 (13.5%) GO:0006104 (13.4%) GO:0006086 (0%)" "GO:0042709 (13.4%) GO:0005829 (13.4%) GO:0009361 (0%)" "GO:0004775 (13.5%) GO:0005524 (13.1%) GO:0000287 (13.1%)" "tricarboxylic acid cycle (13.5%) succinyl-CoA metabolic process (13.4%) pyruvate decarboxylation to acetyl-CoA (0%)" "succinate-CoA ligase complex (13.4%) cytosol (13.4%) succinate-CoA ligase complex (ADP-forming) (0%)" "succinate-CoA ligase (ADP-forming) activity (13.5%) ATP binding (13.1%) magnesium ion binding (13.1%)" "IPR005811 (14.5%) IPR016102 (14.5%) IPR017866 (14.3%)" "ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.5%) Succinyl-CoA synthetase-like (14.5%) Succinyl-CoA synthetase, beta subunit, conserved site (14.3%)" IETGVIHVGDEIEILGLGEDKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20.4%) "GO:0003746 (20.4%) GO:0003924 (20.4%) GO:0005525 (20.4%)" cytosol (20.4%) "translation elongation factor activity (20.4%) GTPase activity (20.4%) GTP binding (20.4%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" VGIVYSYSNIDPDMVTPLLHHDYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.1.1 (100%) asparaginase (100%) GO:0006528 (33.3%) "GO:0042597 (31%) GO:0030313 (2.4%)" GO:0004067 (33.3%) asparagine metabolic process (33.3%) "periplasmic space (31%) cell envelope (2.4%)" asparaginase activity (33.3%) "IPR004550 (11.3%) IPR006034 (11.3%) IPR027473 (11.3%)" "L-asparaginase, type II (11.3%) Asparaginase/glutaminase-like (11.3%) L-asparaginase, C-terminal (11.3%)" VGAILMIDMAHPAGLIAAGLLDNPVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.7%) GO:0035999 (15.7%) GO:0032259 (10.6%)" GO:0005829 (15.7%) "GO:0004372 (15.7%) GO:0030170 (15.7%) GO:0008168 (10.6%)" "glycine biosynthetic process from serine (15.7%) tetrahydrofolate interconversion (15.7%) methylation (10.6%)" cytosol (15.7%) "glycine hydroxymethyltransferase activity (15.7%) pyridoxal phosphate binding (15.7%) methyltransferase activity (10.6%)" "IPR001085 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Serine hydroxymethyltransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" VCTDAVFAAVDLEKEEGAEWLKDCR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (30.2%) GO:0006044 (30.2%)" "GO:0004342 (30.2%) GO:0016853 (9.4%)" "carbohydrate metabolic process (30.2%) N-acetylglucosamine metabolic process (30.2%)" "glucosamine-6-phosphate deaminase activity (30.2%) isomerase activity (9.4%)" "IPR003737 (14.3%) IPR004547 (14.3%) IPR006148 (14.3%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.3%) Glucosamine-6-phosphate isomerase (14.3%) Glucosamine/galactosamine-6-phosphate isomerase (14.3%)" KVFAEKPAEFDPRK Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.8%) GO:0030388 (24.8%) GO:0005975 (0.3%)" "GO:0008270 (25.1%) GO:0004332 (24.8%) GO:0016832 (0.3%)" "glycolytic process (24.8%) fructose 1,6-bisphosphate metabolic process (24.8%) carbohydrate metabolic process (0.3%)" "zinc ion binding (25.1%) fructose-bisphosphate aldolase activity (24.8%) aldehyde-lyase activity (0.3%)" "IPR000771 (25.1%) IPR013785 (25.1%) IPR050246 (25.1%)" "Fructose-bisphosphate aldolase, class-II (25.1%) Aldolase-type TIM barrel (25.1%) Class II Fructose-bisphosphate Aldolase (25.1%)" SIDNAPEEKER root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0%) GO:0070125 (0%)" "GO:0005829 (15.8%) GO:0032045 (11%) GO:0005737 (0.1%)" "GO:0003746 (16%) GO:0003924 (15.9%) GO:0005525 (15.9%)" "translational elongation (0%) mitochondrial translational elongation (0%)" "cytosol (15.8%) guanyl-nucleotide exchange factor complex (11%) cytoplasm (0.1%)" "translation elongation factor activity (16%) GTPase activity (15.9%) GTP binding (15.9%)" "IPR000795 (8.4%) IPR050055 (8.4%) IPR027417 (8.4%)" "Translational (tr)-type GTP-binding domain (8.4%) Elongation factor Tu GTPase (8.4%) P-loop containing nucleoside triphosphate hydrolase (8.4%)" IGEVHDGQATMDWMEQEQER Desulfovibrionales Bacteria Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004540 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFG/EF2 (6.3%)" TFDIESVFAYLLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005509 (100%) calcium ion binding (100%) "IPR024492 (85.7%) IPR011992 (9.5%) IPR002048 (4.8%)" "CT_309/TC_0583-like (85.7%) EF-hand domain pair (9.5%) EF-hand domain (4.8%)" LGEYANAVTPLKDVINSGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" SNLYYEVRPK root "5.6.2.4 (85.7%) 3.6.4.12 (14.3%)" "DNA 3'-5' helicase (85.7%) DNA helicase (14.3%)" "GO:0006260 (8.4%) GO:0009432 (8.3%) GO:0006281 (6.3%)" "GO:0005737 (8.5%) GO:0030894 (6.3%) GO:0043590 (6.3%)" "GO:0005524 (8.5%) GO:0009378 (8.5%) GO:0016787 (8.5%)" "DNA replication (8.4%) SOS response (8.3%) DNA repair (6.3%)" "cytoplasm (8.5%) replisome (6.3%) bacterial nucleoid (6.3%)" "ATP binding (8.5%) four-way junction helicase activity (8.5%) hydrolase activity (8.5%)" "IPR001650 (7.4%) IPR004589 (7.4%) IPR011545 (7.4%)" "Helicase, C-terminal domain-like (7.4%) DNA helicase, ATP-dependent, RecQ type (7.4%) DEAD/DEAH-box helicase domain (7.4%)" GAVGADNSCYENKVSTHGQPLSAAGASIADTIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" IGTCGGLQPNTPVGTFVCSEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.2.3 (100%) uridine phosphorylase (100%) GO:0006152 (33.3%) GO:0005829 (33.3%) GO:0004731 (33.3%) purine nucleoside catabolic process (33.3%) cytosol (33.3%) purine-nucleoside phosphorylase activity (33.3%) "IPR000845 (50%) IPR035994 (50%)" "Nucleoside phosphorylase domain (50%) Nucleoside phosphorylase superfamily (50%)" KRYPDIDIVVGNIATGDAAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" TNSAALAQILAKDYNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (48.8%) IPR019734 (46.2%) IPR013105 (4.6%)" "Tetratricopeptide-like helical domain superfamily (48.8%) Tetratricopeptide repeat (46.2%) Tetratricopeptide repeat 2 (4.6%)" YAEGYPGKR root "2.1.2.1 (99.5%) 2.1.2.7 (0.3%) 4.1.2.- (0.1%)" "glycine hydroxymethyltransferase (99.5%) D-alanine 2-hydroxymethyltransferase (0.3%) Aldehyde-lyases (0.1%)" "GO:0019264 (15.2%) GO:0035999 (15%) GO:0032259 (10.9%)" "GO:0005829 (15.1%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0004372 (15.2%) GO:0030170 (15.2%) GO:0008168 (10.9%)" "glycine biosynthetic process from serine (15.2%) tetrahydrofolate interconversion (15%) methylation (10.9%)" "cytosol (15.1%) cytoplasm (0.1%) membrane (0%)" "glycine hydroxymethyltransferase activity (15.2%) pyridoxal phosphate binding (15.2%) methyltransferase activity (10.9%)" "IPR039429 (14.4%) IPR049943 (14.4%) IPR015421 (14.4%)" "Serine hydroxymethyltransferase-like domain (14.4%) Serine hydroxymethyltransferase-like (14.4%) Pyridoxal phosphate-dependent transferase, major domain (14.4%)" CYGADDVREGVAIMR Pseudomonadati Bacteria Pseudomonadati IPR025964 (100%) GGGtGRT protein (100%) AKSVDPSVAEEANKLIGTYAAHTPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" GIAYINIPTTLLAMVDASVGGK Bacteroidota Bacteria Pseudomonadati Bacteroidota 4.2.3.4 (100%) 3-dehydroquinate synthase (100%) "GO:0009073 (14.4%) GO:0008652 (14.2%) GO:0009423 (14.2%)" GO:0005737 (14.2%) "GO:0003856 (14.4%) GO:0000166 (14.2%) GO:0046872 (14.2%)" "aromatic amino acid family biosynthetic process (14.4%) amino acid biosynthetic process (14.2%) chorismate biosynthetic process (14.2%)" cytoplasm (14.2%) "3-dehydroquinate synthase activity (14.4%) nucleotide binding (14.2%) metal ion binding (14.2%)" "IPR030960 (20.2%) IPR050071 (20.2%) IPR016037 (19.9%)" "3-dehydroquinate synthase, N-terminal domain (20.2%) Dehydroquinate Synthase (20.2%) 3-dehydroquinate synthase AroB (19.9%)" LFVVDTFCGANAATR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17%) GO:0005829 (17%) "GO:0004612 (17%) GO:0005524 (17%) GO:0046872 (17%)" gluconeogenesis (17%) cytosol (17%) "phosphoenolpyruvate carboxykinase (ATP) activity (17%) ATP binding (17%) metal ion binding (17%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" WFNADKGYGFITGEDGQDVFVHFSAINGEGYK Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus "GO:0010468 (25%) GO:0051252 (25%)" GO:0005737 (25%) "GO:0003676 (22.9%) GO:0003677 (2.1%)" "regulation of gene expression (25%) regulation of RNA metabolic process (25%)" cytoplasm (25%) "nucleic acid binding (22.9%) DNA binding (2.1%)" "IPR002059 (16.7%) IPR011129 (16.7%) IPR012156 (16.7%)" "Cold-shock protein Csp, DNA-binding (16.7%) Cold-shock domain (16.7%) Cold shock, CspA (16.7%)" QVANGVVDSFIHVVEQYLTYPVNAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.1.1.- (80%) 1.1.-.- (20%)" "With NAD(+) or NADP(+) as acceptor (80%) Acting on the CH-OH group of donors (20%)" GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR018211 (25.2%) IPR044731 (25.2%) IPR056798 (25.2%)" "Alcohol dehydrogenase, iron-type, conserved site (25.2%) Butanol dehydrogenase-like (25.2%) Fe-containing alcohol dehydrogenase-like, C-terminal (25.2%)" MVYGANMDKGLVLDGLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0044281 (33.3%) "GO:0016625 (33.3%) GO:0030976 (33.3%)" small molecule metabolic process (33.3%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (33.3%) thiamine pyrophosphate binding (33.3%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" EMTPAIVESISER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" SVEKDGYAAVQVGFQDKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" KLPEHPEAPMMACVDTDKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.1%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.1%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR009000 (9.2%) IPR012947 (9.2%) IPR018163 (9.2%)" "Translation protein, beta-barrel domain superfamily (9.2%) Threonyl/alanyl tRNA synthetase, SAD (9.2%) Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily (9.2%)" HQGTFDVAR root "GO:0015833 (20.3%) GO:0015031 (19.5%) GO:0006857 (0%)" "GO:0030288 (20.2%) GO:0043190 (19.6%) GO:0005886 (0%)" "GO:1904680 (20.3%) GO:1900750 (0%)" "peptide transport (20.3%) protein transport (19.5%) oligopeptide transport (0%)" "outer membrane-bounded periplasmic space (20.2%) ATP-binding cassette (ABC) transporter complex (19.6%) plasma membrane (0%)" "peptide transmembrane transporter activity (20.3%) oligopeptide binding (0%)" "IPR000914 (25.4%) IPR039424 (25.4%) IPR030678 (24.6%)" "Solute-binding protein family 5 domain (25.4%) Solute-binding protein family 5 (25.4%) Peptide/nickel binding protein, MppA-type (24.6%)" SEKLQVVTLLGSLRK root "1.6.5.2 (96.4%) 1.6.-.- (2.7%) 1.7.1.6 (0.9%)" "NAD(P)H dehydrogenase (quinone) (96.4%) Acting on NADH or NADPH (2.7%) azobenzene reductase (0.9%)" "GO:0006805 (0.3%) GO:0051289 (0.3%)" GO:0005829 (31.4%) "GO:0010181 (31.4%) GO:0016491 (27.2%) GO:0050446 (5%)" "xenobiotic metabolic process (0.3%) protein homotetramerization (0.3%)" cytosol (31.4%) "FMN binding (31.4%) oxidoreductase activity (27.2%) azobenzene reductase (NADP+) activity (5%)" "IPR005025 (33.7%) IPR029039 (33.7%) IPR050712 (32.5%)" "NADPH-dependent FMN reductase-like domain (33.7%) Flavoprotein-like superfamily (33.7%) NAD(P)H-dependent reductase (32.5%)" KIIADGGSVIIGSHLGRPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" DYEEDFKTALLR root GO:0008652 (10%) "GO:0005737 (20%) GO:0005829 (10%) GO:0042597 (10%)" "GO:0004674 (20%) GO:0016491 (20%) GO:0008899 (10%)" amino acid biosynthetic process (10%) "cytoplasm (20%) cytosol (10%) periplasmic space (10%)" "protein serine/threonine kinase activity (20%) oxidoreductase activity (20%) homoserine O-succinyltransferase activity (10%)" "IPR009383 (49.4%) IPR038134 (49.4%) IPR001853 (0.1%)" "Protein of unknown function DUF1040 (49.4%) YihD-like superfamily (49.4%) DSBA-like thioredoxin domain (0.1%)" ESGLCEDVFEKADER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016301 (100%) kinase activity (100%) IPR027417 (100%) P-loop containing nucleoside triphosphate hydrolase (100%) SIKEKENAAIASIDVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR041218 (25%) IPR049280 (25%) IPR049281 (25%)" "Domain of unknown function DUF5606 (25%) Domain of unknown function DUF6852 (25%) BVU_3817-like, C-terminal domain superfamily (25%)" EGIAKADAEALKK Bacteria Bacteria GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" AAFDFAVEHQSVER root 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0015986 (0.2%) GO:0042777 (0.1%)" "GO:0045259 (31.4%) GO:0005886 (31.3%) GO:0012505 (0.1%)" "GO:0046933 (31.4%) GO:0016787 (5.6%) GO:0046961 (0.1%)" "proton motive force-driven ATP synthesis (0.2%) proton motive force-driven plasma membrane ATP synthesis (0.1%)" "proton-transporting ATP synthase complex (31.4%) plasma membrane (31.3%) endomembrane system (0.1%)" "proton-transporting ATP synthase activity, rotational mechanism (31.4%) hydrolase activity (5.6%) proton-transporting ATPase activity, rotational mechanism (0.1%)" "IPR026015 (33.5%) IPR000711 (33.4%) IPR020781 (32.9%)" "F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily (33.5%) ATPase, OSCP/delta subunit (33.4%) ATPase, OSCP/delta subunit, conserved site (32.9%)" TGKGNLLELAVEAAR Bacteria Bacteria 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006099 (16.7%) IPR006158 (16.7%) IPR006159 (16.7%)" "Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-binding domain (16.7%) Methylmalonyl-CoA mutase, C-terminal (16.7%)" MKECNCDLRDGDAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 4.1.1.15 (100%) glutamate decarboxylase (100%) GO:0006538 (25%) GO:0005829 (25%) "GO:0004351 (25%) GO:0030170 (25%)" L-glutamate catabolic process (25%) cytosol (25%) "glutamate decarboxylase activity (25%) pyridoxal phosphate binding (25%)" "IPR002129 (25%) IPR010107 (25%) IPR015421 (25%)" "Pyridoxal phosphate-dependent decarboxylase (25%) Glutamate decarboxylase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%)" NLVHSGLVANANLDQVKELLCMK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001706 (25%) IPR018265 (25%) IPR021137 (25%)" "Large ribosomal subunit protein bL35 (25%) Large ribosomal subunit protein bL35, conserved site (25%) Large ribosomal subunit protein bL35-like (25%)" STPHQLFVGQCSGGSCNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.49 (100%) glucose-6-phosphate dehydrogenase (NADP(+)) (100%) "GO:0006006 (20%) GO:0009051 (20%)" GO:0005829 (20%) "GO:0004345 (20%) GO:0050661 (20%)" "glucose metabolic process (20%) pentose-phosphate shunt, oxidative branch (20%)" cytosol (20%) "glucose-6-phosphate dehydrogenase activity (20%) NADP binding (20%)" "IPR001282 (20%) IPR019796 (20%) IPR022674 (20%)" "Glucose-6-phosphate dehydrogenase (20%) Glucose-6-phosphate dehydrogenase, active site (20%) Glucose-6-phosphate dehydrogenase, NAD-binding (20%)" DAQSALTVSETTFGR root "GO:0006412 (19.9%) GO:0006353 (0.1%) GO:0006417 (0.1%)" "GO:0005840 (20.2%) GO:1990904 (19.8%) GO:0022625 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.5%) GO:0001070 (0%)" "translation (19.9%) DNA-templated transcription termination (0.1%) regulation of translation (0.1%)" "ribosome (20.2%) ribonucleoprotein complex (19.8%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.5%) RNA-binding transcription regulator activity (0%)" "IPR002136 (33.3%) IPR023574 (33.3%) IPR013005 (33.2%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%) Large ribosomal subunit protein uL4-like (33.2%)" NIITSLELDPAEMEKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.3 (33.3%) 1.2.7.7 (33.3%) 1.2.-.- (16.7%)" "2-oxoglutarate synthase (33.3%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) (33.3%) Acting on the aldehyde or oxo group of donors (16.7%)" "GO:0016491 (66.7%) GO:0043807 (16.7%) GO:0019164 (8.3%)" "oxidoreductase activity (66.7%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity (16.7%) pyruvate synthase activity (8.3%)" "IPR002880 (20%) IPR009014 (20%) IPR029061 (20%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%) Thiamin diphosphate-binding fold (20%)" INAVITGVGGYVPDYVLTNDEISK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) "GO:0006633 (20%) GO:0044550 (20%)" GO:0005737 (20%) "GO:0004315 (20%) GO:0033818 (20%)" "fatty acid biosynthetic process (20%) secondary metabolite biosynthetic process (20%)" cytoplasm (20%) "3-oxoacyl-[acyl-carrier-protein] synthase activity (20%) beta-ketoacyl-acyl-carrier-protein synthase III activity (20%)" "IPR004655 (25%) IPR013747 (25%) IPR013751 (25%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III (25%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (25%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (25%)" SVSETKYEDLCDHSSNMEQIAANAER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.1.13.1 (97.3%) 3.1.-.- (2.7%)" "exoribonuclease II (97.3%) Acting on ester bonds (2.7%)" GO:0006402 (25%) GO:0005829 (25%) "GO:0003723 (25%) GO:0008859 (25%)" mRNA catabolic process (25%) cytosol (25%) "RNA binding (25%) exoribonuclease II activity (25%)" "IPR001900 (12.5%) IPR003029 (12.5%) IPR004476 (12.5%)" "Ribonuclease II/R (12.5%) S1 domain (12.5%) Ribonuclease II/ribonuclease R (12.5%)" QMISDYIHFLGNLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) GO:0009263 (25.4%) GO:0016020 (23.7%) "GO:0046872 (25.4%) GO:0004748 (20.3%) GO:0016491 (5.1%)" deoxyribonucleotide biosynthetic process (25.4%) membrane (23.7%) "metal ion binding (25.4%) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.3%) oxidoreductase activity (5.1%)" "IPR000358 (20%) IPR009078 (20%) IPR012348 (20%)" "Ribonucleotide reductase small subunit family (20%) Ferritin-like superfamily (20%) Ribonucleotide reductase-like (20%)" TNLSSQITLTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.8%) GO:0006044 (32.8%)" "GO:0004342 (32.8%) GO:0016853 (1.6%)" "carbohydrate metabolic process (32.8%) N-acetylglucosamine metabolic process (32.8%)" "glucosamine-6-phosphate deaminase activity (32.8%) isomerase activity (1.6%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" SNQMTGLFSTIDEK root GO:0061077 (1%) "GO:0042597 (96%) GO:0030288 (1%)" "GO:0042803 (1%) GO:0060241 (1%)" obsolete chaperone-mediated protein folding (1%) "periplasmic space (96%) outer membrane-bounded periplasmic space (1%)" "protein homodimerization activity (1%) lysozyme inhibitor activity (1%)" "IPR036501 (51%) IPR014453 (49%)" "Inhibitor of vertebrate lysozyme superfamily (51%) Inhibitor of vertebrate lysozyme (49%)" VNFDTLLEAGCHFGHLKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (26%) IPR005706 (26%) IPR023591 (26%)" "Small ribosomal subunit protein uS2 (26%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (26%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (26%)" EAADYFDIAIKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" LQSIMENIHEQCVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006537 (26.3%) GO:0005829 (23.7%) "GO:0004354 (26.3%) GO:0000166 (23.7%)" glutamate biosynthetic process (26.3%) cytosol (23.7%) "glutamate dehydrogenase (NADP+) activity (26.3%) nucleotide binding (23.7%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" KLNVGINTVVEFLHR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.3%) IPR000795 (8.3%) IPR004161 (8.3%)" "Translation initiation factor IF-2, bacterial-like (8.3%) Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" AQIAATKSDYDREK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.9%) GO:0005737 (16.2%) "GO:0005524 (16.9%) GO:0016853 (16.9%) GO:0140662 (16.9%)" protein refolding (16.9%) cytoplasm (16.2%) "ATP binding (16.9%) isomerase activity (16.9%) ATP-dependent protein folding chaperone (16.9%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR027409 (16.8%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like apical domain superfamily (16.8%)" ELLEDPTRLLLDV Pseudomonadati Bacteria Pseudomonadati "2.3.1.61 (99.5%) 2.3.1.- (0.4%) 2.3.-.- (0.1%)" "dihydrolipoyllysine-residue succinyltransferase (99.5%) Transferring groups other than amino-acyl groups (0.4%) Acyltransferases (0.1%)" "GO:0006099 (20.2%) GO:0033512 (19.2%) GO:0006554 (0.5%)" "GO:0005829 (20.2%) GO:0045252 (19.6%) GO:0005737 (0%)" "GO:0004149 (20.2%) GO:0016746 (0.2%) GO:0031405 (0%)" "tricarboxylic acid cycle (20.2%) L-lysine catabolic process to acetyl-CoA via saccharopine (19.2%) lysine catabolic process (0.5%)" "cytosol (20.2%) oxoglutarate dehydrogenase complex (19.6%) cytoplasm (0%)" "dihydrolipoyllysine-residue succinyltransferase activity (20.2%) acyltransferase activity (0.2%) lipoic acid binding (0%)" "IPR001078 (11.5%) IPR023213 (11.5%) IPR050537 (11.5%)" "2-oxoacid dehydrogenase acyltransferase, catalytic domain (11.5%) Chloramphenicol acetyltransferase-like domain superfamily (11.5%) 2-oxoacid dehydrogenase (11.5%)" NRPIEESLALFKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.18 (100%) glutamine--tRNA ligase (100%) GO:0006425 (25%) GO:0005829 (25%) "GO:0004819 (25%) GO:0005524 (25%)" glutaminyl-tRNA aminoacylation (25%) cytosol (25%) "glutamine-tRNA ligase activity (25%) ATP binding (25%)" "IPR000924 (11.1%) IPR004514 (11.1%) IPR011035 (11.1%)" "Glutamyl/glutaminyl-tRNA synthetase (11.1%) Glutamine-tRNA synthetase (11.1%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (11.1%)" ETSQELGKLDGLTQEEADDIAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.19 (100%) arginine--tRNA ligase (100%) GO:0006420 (24.9%) GO:0005737 (24.9%) "GO:0004814 (24.9%) GO:0005524 (24.9%) GO:0016874 (0.4%)" arginyl-tRNA aminoacylation (24.9%) cytoplasm (24.9%) "arginine-tRNA ligase activity (24.9%) ATP binding (24.9%) ligase activity (0.4%)" "IPR001278 (12.5%) IPR001412 (12.5%) IPR005148 (12.5%)" "Arginine-tRNA ligase (12.5%) Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Arginyl tRNA synthetase N-terminal domain (12.5%)" LDGASLHFAPLEFPAVADFECTTALVEAAK root 2.4.2.3 (100%) uridine phosphorylase (100%) "GO:0009164 (20.3%) GO:0009166 (20.3%) GO:0044206 (15.7%)" "GO:0005829 (20.7%) GO:0032991 (0.2%)" "GO:0004850 (20.7%) GO:0016757 (0.6%) GO:0005524 (0.2%)" "nucleoside catabolic process (20.3%) nucleotide catabolic process (20.3%) UMP salvage (15.7%)" "cytosol (20.7%) protein-containing complex (0.2%)" "uridine phosphorylase activity (20.7%) glycosyltransferase activity (0.6%) ATP binding (0.2%)" "IPR000845 (25.1%) IPR035994 (25.1%) IPR010058 (24.9%)" "Nucleoside phosphorylase domain (25.1%) Nucleoside phosphorylase superfamily (25.1%) Uridine phosphorylase (24.9%)" ETMKEIDPELQILAFKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" VLAPINDFINTLNAFFSAGGK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.1.1.25 (100%) shikimate dehydrogenase (NADP(+)) (100%) "GO:0008652 (14.2%) GO:0009073 (14.2%) GO:0009423 (14.2%)" GO:0005829 (14.2%) "GO:0004764 (14.2%) GO:0050661 (14.2%) GO:0016491 (0.3%)" "amino acid biosynthetic process (14.2%) aromatic amino acid family biosynthetic process (14.2%) chorismate biosynthetic process (14.2%)" cytosol (14.2%) "shikimate 3-dehydrogenase (NADP+) activity (14.2%) NADP binding (14.2%) oxidoreductase activity (0.3%)" "IPR013708 (14.6%) IPR022893 (14.6%) IPR046346 (14.6%)" "Shikimate dehydrogenase substrate binding, N-terminal (14.6%) Shikimate dehydrogenase family (14.6%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (14.6%)" RYDWQLDYGTIAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" TILVPIDISDSELTQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0007155 (5.6%) GO:1902021 (5.6%)" GO:0005737 (22.2%) "GO:0005524 (55.6%) GO:0008859 (5.6%) GO:0016787 (5.6%)" "cell adhesion (5.6%) regulation of bacterial-type flagellum-dependent cell motility (5.6%)" cytoplasm (22.2%) "ATP binding (55.6%) exoribonuclease II activity (5.6%) hydrolase activity (5.6%)" "IPR014729 (33.7%) IPR006016 (33.6%) IPR006015 (32.7%)" "Rossmann-like alpha/beta/alpha sandwich fold (33.7%) UspA (33.6%) Universal stress protein A family (32.7%)" SLFEEQIMMEADRLR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.3.1.1 (100%) dihydrouracil dehydrogenase (NAD(+)) (100%) "GO:0006210 (13.9%) GO:0006212 (13.9%) GO:0044205 (11.9%)" GO:0005737 (13.9%) "GO:0002058 (13.9%) GO:0050661 (13.9%) GO:0004152 (12.9%)" "thymine catabolic process (13.9%) uracil catabolic process (13.9%) 'de novo' UMP biosynthetic process (11.9%)" cytoplasm (13.9%) "uracil binding (13.9%) NADP binding (13.9%) dihydroorotate dehydrogenase activity (12.9%)" "IPR005720 (33.3%) IPR012135 (33.3%) IPR013785 (33.3%)" "Dihydroorotate dehydrogenase, catalytic (33.3%) Dihydroorotate dehydrogenase, class 1/ 2 (33.3%) Aldolase-type TIM barrel (33.3%)" LITLAPSSVQEMADFVGLGFDLAFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (33.3%) 1.2.7.3 (33.3%) 1.2.7.11 (22.2%)" "pyruvate synthase (33.3%) 2-oxoglutarate synthase (33.3%) 2-oxoacid oxidoreductase (ferredoxin) (22.2%)" "GO:0016491 (75%) GO:0019164 (15%) GO:0043807 (5%)" "oxidoreductase activity (75%) pyruvate synthase activity (15%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity (5%)" "IPR002880 (20%) IPR009014 (20%) IPR029061 (20%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%) Thiamin diphosphate-binding fold (20%)" LKEDTVTYKK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.1.22 (100%) ribosylnicotinamide kinase (100%) "GO:0016301 (66.7%) GO:0050262 (33.3%)" "kinase activity (66.7%) ribosylnicotinamide kinase activity (33.3%)" "IPR025393 (50.7%) IPR029044 (49.3%)" "Domain of unknown function DUF4301 (50.7%) Nucleotide-diphospho-sugar transferases (49.3%)" LAANWPLEQDELLTR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006974 (20%) GO:0051604 (20%) GO:0071978 (20%)" "GO:0005737 (20%) GO:0005829 (20%)" "DNA damage response (20%) protein maturation (20%) bacterial-type flagellum-dependent swarming motility (20%)" "cytoplasm (20%) cytosol (20%)" "IPR036411 (25.6%) IPR020945 (25.4%) IPR050289 (25.4%)" "TorD-like superfamily (25.6%) DMSO/Nitrate reductase chaperone (25.4%) TorD/DmsD family chaperones (25.4%)" SEQYEAHLDFPVSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" TVMTDHTVTESYQPVVYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" INVVILDFDDEKKR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.5%) "GO:0022627 (23.7%) GO:0005840 (1.1%) GO:1990904 (0.9%)" "GO:0003729 (24.5%) GO:0003735 (24.5%) GO:0004654 (0.3%)" translation (24.5%) "cytosolic small ribosomal subunit (23.7%) ribosome (1.1%) ribonucleoprotein complex (0.9%)" "mRNA binding (24.5%) structural constituent of ribosome (24.5%) polyribonucleotide nucleotidyltransferase activity (0.3%)" "IPR003029 (24.8%) IPR012340 (24.8%) IPR035104 (24.8%)" "S1 domain (24.8%) Nucleic acid-binding, OB-fold (24.8%) Ribosomal protein S1-like (24.8%)" ESPFSETIISWIEKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) GO:0034599 (50%) GO:0004601 (50%) cellular response to oxidative stress (50%) peroxidase activity (50%) "IPR000889 (25%) IPR013766 (25%) IPR029759 (25%)" "Glutathione peroxidase (25%) Thioredoxin domain (25%) Glutathione peroxidase active site (25%)" IVSNMHQAYER Pseudomonadati Bacteria Pseudomonadati "IPR003741 (33.3%) IPR024185 (33.3%) IPR037171 (33.3%)" "LUD domain (33.3%) 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily (33.3%) NagB/RpiA transferase-like (33.3%)" LLSENGYDPVYGAR root 3.6.1.15 (100%) nucleoside-triphosphate phosphatase (100%) "GO:0034605 (17.4%) GO:0042026 (14.7%) GO:0006508 (0.2%)" "GO:0005829 (14.3%) GO:0005737 (3.2%) GO:0005759 (0.1%)" "GO:0005524 (17.5%) GO:0016887 (17.4%) GO:0042802 (14.3%)" "cellular response to heat (17.4%) protein refolding (14.7%) proteolysis (0.2%)" "cytosol (14.3%) cytoplasm (3.2%) mitochondrial matrix (0.1%)" "ATP binding (17.5%) ATP hydrolysis activity (17.4%) identical protein binding (14.3%)" "IPR019489 (9.1%) IPR027417 (9.1%) IPR050130 (9.1%)" "Clp ATPase, C-terminal (9.1%) P-loop containing nucleoside triphosphate hydrolase (9.1%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (9.1%)" GSSNPHNLVK Pseudomonadati Bacteria Pseudomonadati "GO:0006412 (16.8%) GO:0042254 (16.2%)" "GO:0005737 (16.5%) GO:0015935 (16.5%) GO:0005840 (0.3%)" "GO:0003735 (16.8%) GO:0019843 (16.6%) GO:0003723 (0%)" "translation (16.8%) ribosome biogenesis (16.2%)" "cytoplasm (16.5%) small ribosomal subunit (16.5%) ribosome (0.3%)" "structural constituent of ribosome (16.8%) rRNA binding (16.6%) RNA binding (0%)" "IPR005324 (14.4%) IPR014721 (14.4%) IPR020568 (14.4%)" "Small ribosomal subunit protein uS5, C-terminal (14.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (14.4%) Ribosomal protein uS5 domain 2-type superfamily (14.4%)" YKDGVTYDSFEDPELR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.5%) GO:0005829 (16.5%) "GO:0000049 (16.5%) GO:0000287 (16.5%) GO:0004824 (16.5%)" lysyl-tRNA aminoacylation (16.5%) cytosol (16.5%) "tRNA binding (16.5%) magnesium ion binding (16.5%) lysine-tRNA ligase activity (16.5%)" "IPR002313 (11.1%) IPR004364 (11.1%) IPR004365 (11.1%)" "Lysine-tRNA ligase, class II (11.1%) Aminoacyl-tRNA synthetase, class II (D/K/N) (11.1%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.1%)" VYGENACQALFQSRPEAIVR root "2.1.1.- (91.9%) 2.1.1.185 (8.1%)" "Methyltransferases (91.9%) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (8.1%)" "GO:0032259 (20.6%) GO:0006396 (20.1%)" "GO:0005829 (20.1%) GO:0016020 (0.1%)" "GO:0008173 (20.1%) GO:0003723 (18.2%) GO:0008168 (0.7%)" "methylation (20.6%) RNA processing (20.1%)" "cytosol (20.1%) membrane (0.1%)" "RNA methyltransferase activity (20.1%) RNA binding (18.2%) methyltransferase activity (0.7%)" "IPR004441 (15.1%) IPR013123 (15%) IPR029064 (14.9%)" "RNA methyltransferase TrmH (15.1%) RNA 2-O ribose methyltransferase, substrate binding (15%) Ribosomal protein eL30-like superfamily (14.9%)" AMDVLFPK root 6.1.1.22 (100%) asparagine--tRNA ligase (100%) "GO:0006421 (20.6%) GO:0006520 (0.1%) GO:0006633 (0.1%)" "GO:0005737 (17.9%) GO:0005739 (0.2%) GO:0016020 (0.1%)" "GO:0005524 (20.6%) GO:0004816 (20.2%) GO:0003676 (19.3%)" "asparaginyl-tRNA aminoacylation (20.6%) amino acid metabolic process (0.1%) fatty acid biosynthetic process (0.1%)" "cytoplasm (17.9%) mitochondrion (0.2%) membrane (0.1%)" "ATP binding (20.6%) asparagine-tRNA ligase activity (20.2%) nucleic acid binding (19.3%)" "IPR004364 (14.4%) IPR045864 (14.4%) IPR002312 (14.4%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (14.4%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.4%) Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.4%)" GTRVDGIYTADPEKDPTATK root 2.7.4.22 (100%) UMP kinase (100%) "GO:0006225 (19.9%) GO:0044210 (19.9%) GO:0006412 (0.1%)" "GO:0005737 (19.8%) GO:0016020 (0.3%) GO:0005829 (0.1%)" "GO:0005524 (19.9%) GO:0033862 (19.9%) GO:0016301 (0.1%)" "UDP biosynthetic process (19.9%) 'de novo' CTP biosynthetic process (19.9%) translation (0.1%)" "cytoplasm (19.8%) membrane (0.3%) cytosol (0.1%)" "ATP binding (19.9%) UMP kinase activity (19.9%) kinase activity (0.1%)" "IPR001048 (25.1%) IPR015963 (25%) IPR036393 (25%)" "Aspartate/glutamate/uridylate kinase (25.1%) Uridylate kinase, bacteria (25%) Acetylglutamate kinase-like superfamily (25%)" ESELKDLYNK Bacteroidota Bacteria Pseudomonadati Bacteroidota 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005975 (0.7%) GO:0005886 (49.6%) "GO:0003755 (47.4%) GO:0016853 (1.5%) GO:0004553 (0.7%)" carbohydrate metabolic process (0.7%) plasma membrane (49.6%) "peptidyl-prolyl cis-trans isomerase activity (47.4%) isomerase activity (1.5%) hydrolase activity, hydrolyzing O-glycosyl compounds (0.7%)" "IPR027304 (33.7%) IPR052029 (33.7%) IPR046357 (32.2%)" "Trigger factor/SurA domain superfamily (33.7%) Periplasmic chaperone PpiD (33.7%) Peptidyl-prolyl cis-trans isomerase domain superfamily (32.2%)" LLNEKGEFLNAAEGAEVLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "5.4.2.10 (60%) 5.4.2.2 (40%)" "phosphoglucosamine mutase (60%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (40%)" "GO:0005975 (13.6%) GO:0006048 (13.6%) GO:0009252 (13.6%)" GO:0005829 (13.6%) "GO:0000287 (13.6%) GO:0004615 (13.6%) GO:0008966 (13.6%)" "carbohydrate metabolic process (13.6%) UDP-N-acetylglucosamine biosynthetic process (13.6%) peptidoglycan biosynthetic process (13.6%)" cytosol (13.6%) "magnesium ion binding (13.6%) phosphomannomutase activity (13.6%) phosphoglucosamine mutase activity (13.6%)" "IPR005841 (10.2%) IPR005844 (10.2%) IPR005845 (10.2%)" "Alpha-D-phosphohexomutase superfamily (10.2%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10.2%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (10.2%)" EGIVCNSPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.4 (100%) leucine--tRNA ligase (100%) GO:0006429 (20%) "GO:0005829 (20%) GO:0005739 (0.1%)" "GO:0004823 (20%) GO:0005524 (20%) GO:0002161 (19.8%)" leucyl-tRNA aminoacylation (20%) "cytosol (20%) mitochondrion (0.1%)" "leucine-tRNA ligase activity (20%) ATP binding (20%) aminoacyl-tRNA deacylase activity (19.8%)" "IPR002302 (12.6%) IPR014729 (12.6%) IPR009008 (12.5%)" "Leucine-tRNA ligase (12.6%) Rossmann-like alpha/beta/alpha sandwich fold (12.6%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" NTAAAVENFAGMGLSLLEISHR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" NGALNAAIVGQPAYK root "1.1.1.1 (55.1%) 1.2.1.10 (44.9%)" "alcohol dehydrogenase (55.1%) acetaldehyde dehydrogenase (acetylating) (44.9%)" "GO:0015976 (15.7%) GO:0006066 (15.7%) GO:0006115 (0%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0046872 (20.3%) GO:0008774 (18.9%) GO:0004022 (18.4%)" "carbon utilization (15.7%) alcohol metabolic process (15.7%) ethanol biosynthetic process (0%)" "cytosol (0%) membrane (0%)" "metal ion binding (20.3%) acetaldehyde dehydrogenase (acetylating) activity (18.9%) alcohol dehydrogenase (NAD+) activity (18.4%)" "IPR016163 (11.7%) IPR016161 (11.7%) IPR016162 (11.4%)" "Aldehyde dehydrogenase, C-terminal (11.7%) Aldehyde/histidinol dehydrogenase (11.7%) Aldehyde dehydrogenase, N-terminal (11.4%)" ETPYDAEER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (19.9%) GO:0006096 (19.9%)" GO:0005829 (19.9%) "GO:0004619 (19.9%) GO:0030145 (19.9%) GO:0016853 (0.3%)" "glucose catabolic process (19.9%) glycolytic process (19.9%)" cytosol (19.9%) "phosphoglycerate mutase activity (19.9%) manganese ion binding (19.9%) isomerase activity (0.3%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" LLSNMYVYAGSEHKHDAQNPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006412 (20.5%) GO:0017148 (18.9%)" "GO:0022625 (18.9%) GO:0005840 (1.5%) GO:1990904 (0.8%)" "GO:0003735 (20.5%) GO:0003729 (18.9%)" "translation (20.5%) negative regulation of translation (18.9%)" "cytosolic large ribosomal subunit (18.9%) ribosome (1.5%) ribonucleoprotein complex (0.8%)" "structural constituent of ribosome (20.5%) mRNA binding (18.9%)" "IPR036899 (26%) IPR005822 (25%) IPR023563 (25%)" "Large ribosomal subunit protein uL13 superfamily (26%) Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, conserved site (25%)" IDEVMTKENIVTTNQSTDMEAASR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" SVFPHPTVGEIYHETLFA Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (24.7%) GO:0005737 (24.7%) "GO:0004148 (24.7%) GO:0050660 (24.7%) GO:0016491 (1.2%)" 2-oxoglutarate metabolic process (24.7%) cytoplasm (24.7%) "dihydrolipoyl dehydrogenase (NADH) activity (24.7%) flavin adenine dinucleotide binding (24.7%) oxidoreductase activity (1.2%)" "IPR001100 (12.5%) IPR004099 (12.5%) IPR006258 (12.5%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (12.5%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.5%) Dihydrolipoamide dehydrogenase (12.5%)" FASYELVPADVQEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.3%) "GO:0003746 (25.3%) GO:0005525 (25.3%) GO:0003924 (24%)" ribosome disassembly (25.3%) "translation elongation factor activity (25.3%) GTP binding (25.3%) GTPase activity (24%)" "IPR000640 (7.9%) IPR005517 (7.9%) IPR014721 (7.9%)" "Elongation factor EFG, domain V-like (7.9%) Translation elongation factor EFG/EF2, domain IV (7.9%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (7.9%)" FENRYQEVPDAELPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.2.11 (94.1%) 5.4.2.1 (5.9%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (94.1%) Transferred entry: 5.4.2.11 and 5.4.2.12 (5.9%)" "GO:0006094 (33.3%) GO:0006096 (33.3%)" GO:0004619 (33.3%) "gluconeogenesis (33.3%) glycolytic process (33.3%)" phosphoglycerate mutase activity (33.3%) "IPR001345 (25%) IPR005952 (25%) IPR013078 (25%)" "Phosphoglycerate/bisphosphoglycerate mutase, active site (25%) Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%)" VADQLVDTLEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.5.1 (100%) pyruvate dehydrogenase (quinone) (100%) "GO:0019752 (23.1%) GO:0044281 (1.9%)" "GO:0000287 (25%) GO:0030976 (25%) GO:0003824 (19.2%)" "carboxylic acid metabolic process (23.1%) small molecule metabolic process (1.9%)" "magnesium ion binding (25%) thiamine pyrophosphate binding (25%) catalytic activity (19.2%)" "IPR000399 (11.2%) IPR011766 (11.2%) IPR012001 (11.2%)" "TPP-binding enzyme, conserved site (11.2%) Thiamine pyrophosphate enzyme, TPP-binding (11.2%) Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (11.2%)" ALTESDGDIEKAMEIIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" ELIKPAENYGVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0016226 (16.1%) GO:0051301 (3.2%)" "GO:0005524 (16.1%) GO:0016887 (16.1%) GO:0046872 (16.1%)" "iron-sulfur cluster assembly (16.1%) cell division (3.2%)" "ATP binding (16.1%) ATP hydrolysis activity (16.1%) metal ion binding (16.1%)" "IPR002744 (16.7%) IPR019591 (16.7%) IPR027417 (16.7%)" "MIP18 family-like (16.7%) Mrp/NBP35 ATP-binding protein (16.7%) P-loop containing nucleoside triphosphate hydrolase (16.7%)" LVTSGIWRPVTLTFYDVAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.25 (100%) beta-mannosidase (100%) "GO:0005975 (19.9%) GO:0006516 (19.9%)" "GO:0005576 (19.9%) GO:0005764 (18.1%)" "GO:0004567 (19.9%) GO:0052761 (2.4%)" "carbohydrate metabolic process (19.9%) glycoprotein catabolic process (19.9%)" "extracellular region (19.9%) lysosome (18.1%)" "beta-mannosidase activity (19.9%) exo-1,4-beta-D-glucosaminidase activity (2.4%)" "IPR006102 (11.1%) IPR008979 (11.1%) IPR013783 (11.1%)" "Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (11.1%) Galactose-binding-like domain superfamily (11.1%) Immunoglobulin-like fold (11.1%)" KSDVTGSISTAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006826 (11.1%) GO:0009279 (88.9%) iron ion transport (11.1%) cell outer membrane (88.9%) "IPR012910 (12.7%) IPR023996 (12.7%) IPR023997 (12.7%)" "TonB-dependent receptor, plug domain (12.7%) TonB-dependent outer membrane protein, SusC/RagA (12.7%) TonB-dependent outer membrane protein SusC/RagA, conserved site (12.7%)" EKPQQGEVLAVGPGR Bacteria Bacteria GO:0051085 (0.4%) GO:0005737 (14.7%) "GO:0005524 (17%) GO:0044183 (17%) GO:0046872 (17%)" obsolete chaperone cofactor-dependent protein refolding (0.4%) cytoplasm (14.7%) "ATP binding (17%) protein folding chaperone (17%) metal ion binding (17%)" "IPR011032 (25.8%) IPR020818 (25.8%) IPR037124 (25.8%)" "GroES-like superfamily (25.8%) GroES chaperonin family (25.8%) GroES chaperonin superfamily (25.8%)" KATAAVTEAPAAEAASEEKAAE Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.3%) IPR036373 (33.3%) IPR047859 (33.3%)" "Large ribosomal subunit protein bL17 (33.3%) Large ribosomal subunit protein bL17 superfamily (33.3%) Large ribosomal subunit protein bL17, conserved site (33.3%)" CLIIGSGPAGYTAAIYAGR Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.8.1.9 (97.3%) 4.3.1.9 (2%) 1.1.1.9 (0.7%)" "thioredoxin-disulfide reductase (NADPH) (97.3%) glucosaminate ammonia-lyase (2%) D-xylulose reductase (0.7%)" "GO:0019430 (32.6%) GO:0045454 (0.2%)" GO:0005737 (32.6%) "GO:0004791 (32.6%) GO:0047930 (0.7%) GO:0016491 (0.5%)" "removal of superoxide radicals (32.6%) cell redox homeostasis (0.2%)" cytoplasm (32.6%) "thioredoxin-disulfide reductase (NADPH) activity (32.6%) glucosaminate ammonia-lyase activity (0.7%) oxidoreductase activity (0.5%)" "IPR023753 (20.1%) IPR050097 (20.1%) IPR036188 (20%)" "FAD/NAD(P)-binding domain (20.1%) Ferredoxin--NADP reductase type 2 (20.1%) FAD/NAD(P)-binding domain superfamily (20%)" THLCEAAEKLADEEDVISAFHQLQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR007139 (100%) Protein of unknown function DUF349 (100%) DLESLDYTIIQLSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.9%) IPR007121 (7.9%) IPR007645 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) RNA polymerase, beta subunit, conserved site (7.9%) RNA polymerase Rpb2, domain 3 (7.9%)" VSHTFEVSNTGDMPLVITR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR011467 (50%) IPR013783 (50%)" "Protein of unknown function DUF1573 (50%) Immunoglobulin-like fold (50%)" TISGVYSSESKKDTDFAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (16.7%) IPR006099 (16.7%) IPR006158 (16.7%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-binding domain (16.7%)" YSQNAPLNMYDEVNTK Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (21%) GO:0005829 (0.2%) "GO:0046872 (21%) GO:0051539 (21%) GO:0004333 (20.9%)" tricarboxylic acid cycle (21%) cytosol (0.2%) "metal ion binding (21%) 4 iron, 4 sulfur cluster binding (21%) fumarate hydratase activity (20.9%)" "IPR004646 (16.9%) IPR004647 (16.9%) IPR051208 (16.9%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.9%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.9%) Class-I Fumarase/Tartrate Dehydratase (16.9%)" GMNTAVGDEGGYAPNLGSNAEALAVIAEAVK root "4.2.1.11 (99.7%) 6.3.4.2 (0.3%)" "phosphopyruvate hydratase (99.7%) CTP synthase (glutamine hydrolyzing) (0.3%)" "GO:0006096 (16.7%) GO:0019856 (0.1%) GO:0044210 (0.1%)" "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (15.8%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" "glycolytic process (16.7%) pyrimidine nucleobase biosynthetic process (0.1%) 'de novo' CTP biosynthetic process (0.1%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (15.8%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020810 (16.8%) IPR036849 (16.8%)" "Enolase (16.8%) Enolase, C-terminal TIM barrel domain (16.8%) Enolase-like, C-terminal domain superfamily (16.8%)" FTCVQDIGDLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.1.3.11 (98.7%) 2.1.3.9 (1.3%)" "N-succinylornithine carbamoyltransferase (98.7%) N-acetylornithine carbamoyltransferase (1.3%)" "GO:0019240 (24.8%) GO:0042450 (24.8%) GO:0006526 (0.6%)" "GO:0004585 (24.8%) GO:0016597 (24.8%)" "citrulline biosynthetic process (24.8%) L-arginine biosynthetic process via ornithine (24.8%) L-arginine biosynthetic process (0.6%)" "ornithine carbamoyltransferase activity (24.8%) amino acid binding (24.8%)" "IPR006132 (20.3%) IPR036901 (20.3%) IPR006130 (19.8%)" "Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20.3%) Aspartate/ornithine carbamoyltransferase superfamily (20.3%) Aspartate/ornithine carbamoyltransferase (19.8%)" TASAEQAEEIHAHIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" QEGGSVGSQATATDAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015159 (100%) polysaccharide transmembrane transporter activity (100%) "IPR003715 (33.3%) IPR019554 (33.3%) IPR049712 (33.3%)" "Polysaccharide export protein, N-terminal domain (33.3%) Soluble ligand binding domain (33.3%) Polysaccharide export protein (33.3%)" MKVSEVSETQADNLVHMLDAYAEK Collinsella aerofaciens Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella aerofaciens 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0005829 (50%) GO:0008861 (50%) cytosol (50%) formate C-acetyltransferase activity (50%) "IPR001150 (33.3%) IPR019777 (33.3%) IPR050244 (33.3%)" "Glycine radical domain (33.3%) Formate C-acetyltransferase glycine radical, conserved site (33.3%) Autonomous Glycyl Radical Cofactor (33.3%)" KAVEAVTPEHK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (50%) GO:0004356 (50%) glutamine biosynthetic process (50%) glutamine synthetase activity (50%) "IPR008146 (14.3%) IPR008147 (14.3%) IPR014746 (14.3%)" "Glutamine synthetase, catalytic domain (14.3%) Glutamine synthetase, N-terminal domain (14.3%) Glutamine synthetase/guanido kinase, catalytic domain (14.3%)" QVIITQASEIHQGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.2.8 (100%) acetylglutamate kinase (100%) "GO:0042450 (24.4%) GO:0006526 (2.4%)" GO:0005737 (24.4%) "GO:0003991 (24.4%) GO:0005524 (24.4%)" "L-arginine biosynthetic process via ornithine (24.4%) L-arginine biosynthetic process (2.4%)" cytoplasm (24.4%) "acetylglutamate kinase activity (24.4%) ATP binding (24.4%)" "IPR001048 (25%) IPR004662 (25%) IPR036393 (25%)" "Aspartate/glutamate/uridylate kinase (25%) Acetylglutamate kinase family (25%) Acetylglutamate kinase-like superfamily (25%)" GGIRFHPSVNLSILK root "1.4.1.4 (98.5%) 1.4.1.2 (1.2%) 1.1.1.307 (0.1%)" "glutamate dehydrogenase (NADP(+)) (98.5%) glutamate dehydrogenase (1.2%) D-xylose reductase [NAD(P)H] (0.1%)" "GO:0006537 (26.7%) GO:0019676 (0%) GO:0006777 (0%)" "GO:0005829 (26.7%) GO:0009986 (0.2%) GO:0005634 (0.1%)" "GO:0004354 (26.7%) GO:0000166 (17.5%) GO:0004352 (2%)" "glutamate biosynthetic process (26.7%) ammonia assimilation cycle (0%) Mo-molybdopterin cofactor biosynthetic process (0%)" "cytosol (26.7%) cell surface (0.2%) nucleus (0.1%)" "glutamate dehydrogenase (NADP+) activity (26.7%) nucleotide binding (17.5%) glutamate dehydrogenase (NAD+) activity (2%)" "IPR006097 (12.9%) IPR050724 (12.9%) IPR046346 (12.9%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.9%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (12.9%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (12.9%)" VTIHTARPGIVIGK root "GO:0006412 (19.9%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (20%) GO:0005840 (0.2%) GO:0015934 (0%)" "GO:0019843 (20%) GO:0003735 (20%) GO:0003729 (19.6%)" "translation (19.9%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (20%) ribosome (0.2%) large ribosomal subunit (0%)" "rRNA binding (20%) structural constituent of ribosome (20%) mRNA binding (19.6%)" "IPR004044 (11.2%) IPR009019 (11.2%) IPR015946 (11.2%)" "K Homology domain, type 2 (11.2%) K homology domain superfamily, prokaryotic type (11.2%) K homology domain-like, alpha/beta (11.2%)" LGEIYLTYAEAVLR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" IETGIVKVGEEVQIIGLGAAGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20.5%) "GO:0003746 (20.5%) GO:0003924 (20.5%) GO:0005525 (20.5%)" cytosol (20.5%) "translation elongation factor activity (20.5%) GTPase activity (20.5%) GTP binding (20.5%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" LANELSDAAENKGTAVKK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (19.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0015935 (19.7%) GO:0005840 (0.7%) GO:0022627 (0.1%)" "GO:0003735 (19.8%) GO:0019843 (19.8%) GO:0000049 (19.6%)" "translation (19.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "small ribosomal subunit (19.7%) ribosome (0.7%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (19.8%) rRNA binding (19.8%) tRNA binding (19.6%)" "IPR023798 (20.1%) IPR036823 (20.1%) IPR000235 (20%)" "Small ribosomal subunit protein uS7 domain (20.1%) Small ribosomal subunit protein uS7 domain superfamily (20.1%) Small ribosomal subunit protein uS7 (20%)" AEAEALEASGHPLKER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (16.2%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (16.2%)" "IPR001114 (14.4%) IPR027417 (14.4%) IPR033128 (14.4%)" "Adenylosuccinate synthetase (14.4%) P-loop containing nucleoside triphosphate hydrolase (14.4%) Adenylosuccinate synthase, active site (14.4%)" LSGESLMGEKQYGIDEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.4.22 (100%) UMP kinase (100%) "GO:0006225 (19.8%) GO:0044210 (19.6%)" "GO:0005737 (19.6%) GO:0016020 (1.2%)" "GO:0005524 (19.8%) GO:0033862 (19.8%) GO:0016301 (0.2%)" "UDP biosynthetic process (19.8%) 'de novo' CTP biosynthetic process (19.6%)" "cytoplasm (19.6%) membrane (1.2%)" "ATP binding (19.8%) UMP kinase activity (19.8%) kinase activity (0.2%)" "IPR001048 (25.1%) IPR036393 (25.1%) IPR011817 (24.9%)" "Aspartate/glutamate/uridylate kinase (25.1%) Acetylglutamate kinase-like superfamily (25.1%) Uridylate kinase (24.9%)" YTELVPEITQEPDYEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.11.1.24 (96.2%) 1.11.1.- (3.8%)" "thioredoxin-dependent peroxiredoxin (96.2%) Peroxidases (3.8%)" GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" VKVLSVADMFAEAIRR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" VKDAMKGGHEQDWIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (87.5%) GO:0050112 (12.5%)" "nucleotide binding (87.5%) inositol 2-dehydrogenase (NAD+) activity (12.5%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" MLHDMTGADSSVSK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria GO:0005829 (4.4%) GO:0003677 (95.6%) cytosol (4.4%) DNA binding (95.6%) "IPR013559 (33.7%) IPR039446 (33.7%) IPR039445 (32.6%)" "YheO-like (33.7%) Transcriptional regulator DauR-like (33.7%) Transcriptional regulator DauR-like, HTH domain (32.6%)" AIPAGPVCHTGADTCFGEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.5.4.19 (50%) 3.6.1.31 (50%)" "phosphoribosyl-AMP cyclohydrolase (50%) phosphoribosyl-ATP diphosphatase (50%)" GO:0000105 (20%) GO:0005737 (20%) "GO:0004635 (20%) GO:0004636 (20%) GO:0005524 (20%)" L-histidine biosynthetic process (20%) cytoplasm (20%) "phosphoribosyl-AMP cyclohydrolase activity (20%) phosphoribosyl-ATP diphosphatase activity (20%) ATP binding (20%)" "IPR002496 (20%) IPR008179 (20%) IPR021130 (20%)" "Phosphoribosyl-AMP cyclohydrolase domain (20%) Phosphoribosyl-ATP pyrophosphohydrolase (20%) Phosphoribosyl-ATP pyrophosphohydrolase-like (20%)" SKTGDAHLGHVFNDGPADKGGLR Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.8.4.12 (53.3%) 1.8.4.11 (46.7%)" "peptide-methionine (R)-S-oxide reductase (53.3%) peptide-methionine (S)-S-oxide reductase (46.7%)" "GO:0006979 (17.1%) GO:0030091 (17.1%) GO:0034599 (0.5%)" GO:0005737 (17.6%) "GO:0008113 (17.6%) GO:0033743 (17.6%) GO:0033744 (11.8%)" "response to oxidative stress (17.1%) protein repair (17.1%) cellular response to oxidative stress (0.5%)" cytoplasm (17.6%) "peptide-methionine (S)-S-oxide reductase activity (17.6%) peptide-methionine (R)-S-oxide reductase activity (17.6%) L-methionine (S)-S-oxide reductase activity (11.8%)" "IPR002569 (20%) IPR002579 (20%) IPR011057 (20%)" "Peptide methionine sulphoxide reductase MsrA domain (20%) Peptide methionine sulphoxide reductase MrsB domain (20%) Mss4-like superfamily (20%)" TFDVNLFTKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001383 (24.8%) IPR026569 (24.8%) IPR034704 (24.8%)" "Large ribosomal subunit protein bL28, bacteria (24.8%) Large ribosomal subunit protein bL28 (24.8%) Large ribosomal subunit protein bL28/bL31-like superfamily (24.8%)" DVLGANACPVVIPIGAEESFKGVVDLIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" GNYDTTFIDTKFDKEDLKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "6.3.4.14 (68.8%) 6.4.1.7 (18.8%) 6.4.1.1 (6.3%)" "biotin carboxylase (68.8%) 2-oxoglutarate carboxylase (18.8%) pyruvate carboxylase (6.3%)" GO:2001295 (18.7%) "GO:0005524 (21.3%) GO:0046872 (21.3%) GO:0003989 (17.3%)" malonyl-CoA biosynthetic process (18.7%) "ATP binding (21.3%) metal ion binding (21.3%) acetyl-CoA carboxylase activity (17.3%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" ILQDADDIYIQGLRDWK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (12.5%) IPR004739 (12.5%) IPR014729 (12.5%)" "GMP synthase, C-terminal (12.5%) GMP synthase, glutamine amidotransferase (12.5%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" AKIDMANPNMHFRDPIIYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.18 (100%) glutamine--tRNA ligase (100%) "GO:0006425 (24.9%) GO:0006424 (0.3%)" GO:0005829 (24.9%) "GO:0004819 (24.9%) GO:0005524 (24.9%)" "glutaminyl-tRNA aminoacylation (24.9%) glutamyl-tRNA aminoacylation (0.3%)" cytosol (24.9%) "glutamine-tRNA ligase activity (24.9%) ATP binding (24.9%)" "IPR014729 (10.4%) IPR020058 (10.4%) IPR050132 (10.4%)" "Rossmann-like alpha/beta/alpha sandwich fold (10.4%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (10.4%) Glutamine/Glutamate--tRNA Ligase (10.4%)" FLTVLPLGGNSITHDLVSLQMEEEEAERLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0043093 (33.3%) "GO:0009898 (33.3%) GO:0032153 (33.3%)" FtsZ-dependent cytokinesis (33.3%) "cytoplasmic side of plasma membrane (33.3%) cell division site (33.3%)" "IPR003494 (25%) IPR020823 (25%) IPR043129 (25%)" "SHS2 domain inserted in FtsA (25%) Cell division protein FtsA (25%) ATPase, nucleotide binding domain (25%)" TTVTSALPYANGPVHIGHLAGVYVPADIYVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.8%) GO:0005829 (16.8%) "GO:0004825 (16.8%) GO:0005524 (16.8%) GO:0000049 (16.4%)" methionyl-tRNA aminoacylation (16.8%) cytosol (16.8%) "methionine-tRNA ligase activity (16.8%) ATP binding (16.8%) tRNA binding (16.4%)" "IPR001412 (8.4%) IPR015413 (8.4%) IPR023458 (8.4%)" "Aminoacyl-tRNA synthetase, class I, conserved site (8.4%) Methionyl/Leucyl tRNA synthetase (8.4%) Methionine-tRNA ligase, type 1 (8.4%)" HGAGPIILQSHGDPSEPISFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0016787 (95%) GO:0046872 (5%)" "hydrolase activity (95%) metal ion binding (5%)" IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) GFGLENLNLEWTERR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (25%) GO:0005737 (25%) "GO:0004148 (25%) GO:0050660 (25%)" 2-oxoglutarate metabolic process (25%) cytoplasm (25%) "dihydrolipoyl dehydrogenase (NADH) activity (25%) flavin adenine dinucleotide binding (25%)" "IPR001100 (12.5%) IPR004099 (12.5%) IPR006258 (12.5%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (12.5%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.5%) Dihydrolipoamide dehydrogenase (12.5%)" EAAVQQQQAVAQSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033103 (50%) GO:0033104 (50%) protein secretion by the type VI secretion system (50%) type VI protein secretion system complex (50%) IPR035576 (100%) Type VI secretion system TssC (100%) KFLYSDHEIFLR root "GO:0006457 (0%) GO:0006974 (0%) GO:0009408 (0%)" "GO:0005737 (1.1%) GO:0005829 (0%)" "GO:0005524 (24.6%) GO:0016887 (24.6%) GO:0051082 (24.6%)" "protein folding (0%) DNA damage response (0%) response to heat (0%)" "cytoplasm (1.1%) cytosol (0%)" "ATP binding (24.6%) ATP hydrolysis activity (24.6%) unfolded protein binding (24.6%)" "IPR001404 (16.8%) IPR020575 (16.8%) IPR036890 (16.8%)" "Heat shock protein Hsp90 family (16.8%) Heat shock protein Hsp90, N-terminal (16.8%) Histidine kinase/HSP90-like ATPase superfamily (16.8%)" GKNIVLNIFPSLDTGVCATSVR Bacteria Bacteria "1.11.1.24 (94.4%) 1.11.1.- (5.6%)" "thioredoxin-dependent peroxiredoxin (94.4%) Peroxidases (5.6%)" GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" AGADEAIVMPSKGNPIVFGQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.4.13.- (61.9%) 3.5.1.18 (38.1%)" "Dipeptidases (61.9%) succinyl-diaminopimelate desuccinylase (38.1%)" "GO:0046872 (49.3%) GO:0016787 (36%) GO:0016805 (8.1%)" "metal ion binding (49.3%) hydrolase activity (36%) dipeptidase activity (8.1%)" "IPR002933 (33.5%) IPR051458 (33.5%) IPR011650 (33%)" "Peptidase M20 (33.5%) Cytosolic and Metallo Dipeptidase (33.5%) Peptidase M20, dimerisation domain (33%)" GLSTAVGDEGGFAPALDGTEDALNSIMAAIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.8%) "GO:0000015 (16.8%) GO:0005576 (16.8%) GO:0009986 (15.8%)" "GO:0000287 (16.8%) GO:0004634 (16.8%)" glycolytic process (16.8%) "phosphopyruvate hydratase complex (16.8%) extracellular region (16.8%) cell surface (15.8%)" "magnesium ion binding (16.8%) phosphopyruvate hydratase activity (16.8%)" "IPR000941 (17%) IPR020809 (17%) IPR020810 (17%)" "Enolase (17%) Enolase, conserved site (17%) Enolase, C-terminal TIM barrel domain (17%)" TVSIDPEAIAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.2.2 (77.8%) 5.4.2.- (22.2%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (77.8%) Phosphotransferases (phosphomutases) (22.2%)" "GO:0005975 (23.6%) GO:0006166 (23.6%)" "GO:0000287 (23.6%) GO:0008973 (23.6%) GO:0004614 (5.5%)" "carbohydrate metabolic process (23.6%) purine ribonucleoside salvage (23.6%)" "magnesium ion binding (23.6%) phosphopentomutase activity (23.6%) phosphoglucomutase activity (5.5%)" "IPR005844 (12.9%) IPR016055 (12.9%) IPR016066 (12.9%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.9%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (12.9%) Alpha-D-phosphohexomutase, conserved site (12.9%)" LSVFKPIAQPR root "2.3.1.8 (99.8%) 2.3.-.- (0.1%) 2.3.1.222 (0.1%)" "phosphate acetyltransferase (99.8%) Acyltransferases (0.1%) phosphate propanoyltransferase (0.1%)" "GO:0006085 (28.4%) GO:0006083 (0%) GO:0019413 (0%)" "GO:0005737 (34.3%) GO:0016020 (0.5%) GO:0005829 (0%)" "GO:0008959 (36%) GO:0016746 (0.4%) GO:0016740 (0.2%)" "acetyl-CoA biosynthetic process (28.4%) acetate metabolic process (0%) acetate biosynthetic process (0%)" "cytoplasm (34.3%) membrane (0.5%) cytosol (0%)" "phosphate acetyltransferase activity (36%) acyltransferase activity (0.4%) transferase activity (0.2%)" "IPR027417 (11.6%) IPR050500 (11.5%) IPR010766 (11.2%)" "P-loop containing nucleoside triphosphate hydrolase (11.6%) Phosphate Acetyltransferase/Butyryltransferase (11.5%) DRTGG (11.2%)" VEISNTSHPFYTGK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR002150 (25%) IPR027493 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL31 type A/B (25%) Large ribosomal subunit protein bL31 type B (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" VAADTAQPFKVNE Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0005886 (19%) GO:0045259 (19%)" "GO:0005524 (19%) GO:0043531 (19%) GO:0046933 (19%)" "plasma membrane (19%) proton-transporting ATP synthase complex (19%)" "ATP binding (19%) ADP binding (19%) proton-transporting ATP synthase activity, rotational mechanism (19%)" "IPR000194 (10%) IPR000793 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) ATP synthase, alpha subunit, C-terminal (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" IGNPLLYTPEDYEAVIVAITK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.99.1.3 (100%) sirohydrochlorin cobaltochelatase (100%) GO:0019251 (33.3%) "GO:0016852 (33.3%) GO:0046872 (33.3%)" anaerobic cobalamin biosynthetic process (33.3%) "sirohydrochlorin cobaltochelatase activity (33.3%) metal ion binding (33.3%)" IPR010388 (100%) Anaerobic cobalt chelatase (100%) VLYAYSEATVPK root "6.4.1.3 (41.7%) 2.1.3.1 (33.3%) 6.4.1.2 (16.7%)" "propionyl-CoA carboxylase (41.7%) methylmalonyl-CoA carboxytransferase (33.3%) acetyl-CoA carboxylase (16.7%)" "GO:0015977 (17.1%) GO:0006633 (4%)" GO:0009317 (21.4%) "GO:0004658 (23.2%) GO:0003989 (20.3%) GO:0016740 (12.9%)" "carbon fixation (17.1%) fatty acid biosynthetic process (4%)" acetyl-CoA carboxylase complex (21.4%) "propionyl-CoA carboxylase activity (23.2%) acetyl-CoA carboxylase activity (20.3%) transferase activity (12.9%)" "IPR011763 (19.4%) IPR029045 (19.4%) IPR034733 (19.4%)" "Acetyl-coenzyme A carboxyltransferase, C-terminal (19.4%) ClpP/crotonase-like domain superfamily (19.4%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (19.4%)" AAEILDLTEYLDRKPK Bacteria Bacteria "3.6.3.20 (83.3%) 3.6.3.- (11.1%) 3.6.3.19 (5.6%)" "Transferred entry: 7.6.2.10 (83.3%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (11.1%) Transferred entry: 7.5.2.1 (5.6%)" GO:0008643 (19.7%) GO:0055052 (20.1%) "GO:0005524 (20.1%) GO:0016887 (20.1%) GO:0140359 (19.9%)" carbohydrate transport (19.7%) ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing (20.1%) "ATP binding (20.1%) ATP hydrolysis activity (20.1%) ABC-type transporter activity (19.9%)" "IPR003439 (11.2%) IPR008995 (11.2%) IPR012340 (11.2%)" "ABC transporter-like, ATP-binding domain (11.2%) Molybdate/tungstate binding, C-terminal (11.2%) Nucleic acid-binding, OB-fold (11.2%)" REDGSVWADLTKDGLDEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.19 (100%) arginine--tRNA ligase (100%) GO:0006420 (25%) GO:0005737 (25%) "GO:0004814 (25%) GO:0005524 (25%)" arginyl-tRNA aminoacylation (25%) cytoplasm (25%) "arginine-tRNA ligase activity (25%) ATP binding (25%)" "IPR001278 (12.5%) IPR001412 (12.5%) IPR005148 (12.5%)" "Arginine-tRNA ligase (12.5%) Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Arginyl tRNA synthetase N-terminal domain (12.5%)" KKYDFVLCSIDGGNLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" KGMDANEALEK Bacteria Bacteria GO:0016226 (33.3%) "GO:0005506 (33.3%) GO:0051536 (33.3%)" iron-sulfur cluster assembly (33.3%) "iron ion binding (33.3%) iron-sulfur cluster binding (33.3%)" IPR002871 (100%) NIF system FeS cluster assembly, NifU, N-terminal (100%) FYCTGTTGTLIQEALK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.2.3.3 (100%) methylglyoxal synthase (100%) GO:0019242 (33.3%) GO:0005829 (33.3%) GO:0008929 (33.3%) methylglyoxal biosynthetic process (33.3%) cytosol (33.3%) methylglyoxal synthase activity (33.3%) "IPR004363 (25%) IPR011607 (25%) IPR018148 (25%)" "Methylglyoxal synthase (25%) Methylglyoxal synthase-like domain (25%) Methylglyoxal synthase, active site (25%)" IKDSLPSGSMHR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0003677 (100%) DNA binding (100%) ATILFDGAMSHAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) "GO:0004553 (42.9%) GO:0004565 (7.1%)" carbohydrate metabolic process (50%) "hydrolase activity, hydrolyzing O-glycosyl compounds (42.9%) beta-galactosidase activity (7.1%)" "IPR006101 (7.7%) IPR006102 (7.7%) IPR006103 (7.7%)" "Glycoside hydrolase, family 2 (7.7%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.7%) Glycoside hydrolase family 2, catalytic domain (7.7%)" DNTSPVKVEVDAPQQHPDAVGTWR Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (50%) GO:0016491 (41.7%) GO:0050112 (8.3%)" "nucleotide binding (50%) oxidoreductase activity (41.7%) inositol 2-dehydrogenase (NAD+) activity (8.3%)" "IPR043906 (22.4%) IPR000683 (21.2%) IPR036291 (21.2%)" "Gfo/Idh/MocA-like oxidoreductase, bacterial type, C-terminal (22.4%) Gfo/Idh/MocA-like oxidoreductase, N-terminal (21.2%) NAD(P)-binding domain superfamily (21.2%)" ELPTAVSLLSQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006826 (50%) GO:0009279 (50%) iron ion transport (50%) cell outer membrane (50%) "IPR000531 (25%) IPR012910 (25%) IPR036942 (25%)" "TonB-dependent receptor-like, beta-barrel (25%) TonB-dependent receptor, plug domain (25%) TonB-dependent receptor-like, beta-barrel domain superfamily (25%)" NVTAGASPMDIKR Pseudomonadati Bacteria Pseudomonadati 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (19.4%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (11.9%) GO:1990220 (0.1%)" "GO:0005524 (19.4%) GO:0140662 (19.4%) GO:0016853 (17.6%)" "protein refolding (19.4%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (11.9%) GroEL-GroES complex (0.1%)" "ATP binding (19.4%) ATP-dependent protein folding chaperone (19.4%) isomerase activity (17.6%)" "IPR001844 (17.7%) IPR002423 (17.7%) IPR027410 (17.7%)" "Chaperonin Cpn60/GroEL (17.7%) Chaperonin Cpn60/GroEL/TCP-1 family (17.7%) TCP-1-like chaperonin intermediate domain superfamily (17.7%)" FVSPVSGVVTSVER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "7.2.1.1 (99.4%) 1.6.5.- (0.6%)" "NADH:ubiquinone reductase (Na(+)-transporting) (99.4%) With a quinone or similar compound as acceptor (0.6%)" GO:0006814 (49.9%) "GO:0016655 (49.9%) GO:0016491 (0.3%)" sodium ion transport (49.9%) "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (49.9%) oxidoreductase activity (0.3%)" "IPR008703 (25.1%) IPR056147 (25.1%) IPR056148 (25.1%)" "Na(+)-translocating NADH-quinone reductase subunit A (25.1%) NqrA, N-terminal barrel-sandwich hybrid domain (25.1%) NqrA, second alpha/beta domain (25.1%)" VDKVDVVPQGWGNPVEVFEHALEHEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.2%) GO:0006879 (14.2%)" "GO:0005829 (14.2%) GO:0005737 (0.3%)" "GO:0004322 (14.2%) GO:0008198 (14.2%) GO:0008199 (14.2%)" "iron ion transport (14.2%) intracellular iron ion homeostasis (14.2%)" "cytosol (14.2%) cytoplasm (0.3%)" "ferroxidase activity (14.2%) ferrous iron binding (14.2%) ferric iron binding (14.2%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" VGINLLADPVGVPSDHIEGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0043093 (29%) GO:0051301 (4.3%)" "GO:0009898 (33.3%) GO:0032153 (33.3%)" "FtsZ-dependent cytokinesis (29%) cell division (4.3%)" "cytoplasmic side of plasma membrane (33.3%) cell division site (33.3%)" "IPR003494 (25.6%) IPR043129 (25.6%) IPR050696 (25.6%)" "SHS2 domain inserted in FtsA (25.6%) ATPase, nucleotide binding domain (25.6%) Bacterial cell division protein FtsA/MreB (25.6%)" VTWVDDKGNVQTNMGYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.3 (100%) glutamate dehydrogenase [NAD(P)(+)] (100%) GO:0006537 (25.3%) GO:0005829 (25.3%) "GO:0004354 (25.3%) GO:0000166 (23.7%) GO:0016491 (0.3%)" glutamate biosynthetic process (25.3%) cytosol (25.3%) "glutamate dehydrogenase (NADP+) activity (25.3%) nucleotide binding (23.7%) oxidoreductase activity (0.3%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" AAGANKLAIVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" NITNPVGIMLFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) GO:0017004 (25.3%) GO:0030313 (25.3%) "GO:0016209 (24%) GO:0016491 (24%) GO:0004601 (1.3%)" cytochrome complex assembly (25.3%) cell envelope (25.3%) "antioxidant activity (24%) oxidoreductase activity (24%) peroxidase activity (1.3%)" "IPR000866 (16.7%) IPR013766 (16.7%) IPR017937 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Thioredoxin, conserved site (16.7%)" QKQAAFSDTIFVVGTR root "GO:0006865 (33.2%) GO:0015813 (0%) GO:0070778 (0%)" "GO:0005576 (33.2%) GO:0030288 (33.2%) GO:0016020 (0%)" "GO:0016595 (0%) GO:0070335 (0%)" "amino acid transport (33.2%) L-glutamate transmembrane transport (0%) L-aspartate transmembrane transport (0%)" "extracellular region (33.2%) outer membrane-bounded periplasmic space (33.2%) membrane (0%)" "glutamate binding (0%) aspartate binding (0%)" "IPR001638 (50%) IPR051455 (50%)" "Solute-binding protein family 3/N-terminal domain of MltF (50%) Bacterial solute-binding protein 3 (50%)" NVEASFELNDASK root "GO:0006974 (0.5%) GO:0042542 (0.5%)" GO:0005829 (48.6%) "GO:0000166 (48.6%) GO:0000049 (0.5%) GO:0005524 (0.5%)" "DNA damage response (0.5%) response to hydrogen peroxide (0.5%)" cytosol (48.6%) "nucleotide binding (48.6%) tRNA binding (0.5%) ATP binding (0.5%)" "IPR007551 (25.7%) IPR035570 (25.7%) IPR036183 (25.7%)" "Nucleotide-binding protein YajQ/Smlt4090-like (25.7%) UPF0234, N-terminal (25.7%) YajQ-like superfamily (25.7%)" DLDKFLWFIESNIE root "1.16.-.- (99.4%) 1.16.3.1 (0.4%) 1.-.-.- (0.2%)" "Oxidizing metal ions (99.4%) ferroxidase (0.4%) Oxidoreductases (0.2%)" "GO:0006879 (14.5%) GO:0030261 (14.5%) GO:0006950 (0%)" "GO:0005737 (14.5%) GO:0009295 (10.9%) GO:0016020 (0.1%)" "GO:0008199 (15.3%) GO:0016722 (15.3%) GO:0003677 (14.7%)" "intracellular iron ion homeostasis (14.5%) chromosome condensation (14.5%) response to stress (0%)" "cytoplasm (14.5%) nucleoid (10.9%) membrane (0.1%)" "ferric iron binding (15.3%) oxidoreductase activity, acting on metal ions (15.3%) DNA binding (14.7%)" "IPR009078 (16.8%) IPR012347 (16.8%) IPR002177 (16.8%)" "Ferritin-like superfamily (16.8%) Ferritin-like (16.8%) DNA-binding protein Dps (16.8%)" ACGVELGLPYDMVYRQPFPGPGLGVR Bacteria Bacteria 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (32.2%) "GO:0003921 (33%) GO:0005524 (33%) GO:0016740 (1.7%)" cytosol (32.2%) "GMP synthase activity (33%) ATP binding (33%) transferase activity (1.7%)" "IPR001674 (16.9%) IPR014729 (16.9%) IPR025777 (16.9%)" "GMP synthase, C-terminal (16.9%) Rossmann-like alpha/beta/alpha sandwich fold (16.9%) GMP synthetase ATP pyrophosphatase domain (16.9%)" VWIFKGEILGGMAAVEQPEKPAAQPK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (20%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (20%) GO:0005840 (0.4%) GO:0005737 (0%)" "GO:0003735 (20%) GO:0019843 (19.7%) GO:0003729 (19.7%)" "translation (20%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (20%) ribosome (0.4%) cytoplasm (0%)" "structural constituent of ribosome (20%) rRNA binding (19.7%) mRNA binding (19.7%)" "IPR001351 (11.3%) IPR036419 (11.3%) IPR005704 (11.2%)" "Small ribosomal subunit protein uS3, C-terminal (11.3%) Ribosomal protein S3, C-terminal domain superfamily (11.3%) Small ribosomal subunit protein uS3, bacteria (11.2%)" FAAQHHFFGYEGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.3%) GO:0006002 (14.1%)" "GO:0005829 (14.2%) GO:0005737 (0.1%)" "GO:0003872 (14.3%) GO:0047334 (14.3%) GO:0005524 (14.2%)" "response to glucose (14.3%) fructose 6-phosphate metabolic process (14.1%)" "cytosol (14.2%) cytoplasm (0.1%)" "6-phosphofructokinase activity (14.3%) diphosphate-fructose-6-phosphate 1-phosphotransferase activity (14.3%) ATP binding (14.2%)" "IPR035966 (25.1%) IPR000023 (25%) IPR011183 (25%)" "Phosphofructokinase superfamily (25.1%) Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%)" AIEQAFVQSPYVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR012640 (50%) IPR025411 (50%)" "Membrane lipoprotein, lipid attachment site (50%) Domain of unknown function DUF4136 (50%)" VPVITGSLTELVCTLDKK Clostridia Bacteria Bacillati Bacillota Clostridia "1.2.1.- (91.7%) 1.2.1.12 (8.3%)" "With NAD(+) or NADP(+) as acceptor (91.7%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (8.3%)" GO:0006006 (25%) "GO:0016620 (25%) GO:0050661 (25%) GO:0051287 (25%)" glucose metabolic process (25%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (25%) NADP binding (25%) NAD binding (25%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" SMQPWHFFVIEGEGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.-.-.- (100%) Oxidoreductases (100%) GO:0005829 (0.8%) "GO:0016491 (97.5%) GO:0010181 (0.8%) GO:0042803 (0.8%)" cytosol (0.8%) "oxidoreductase activity (97.5%) FMN binding (0.8%) protein homodimerization activity (0.8%)" "IPR000415 (25.3%) IPR029479 (25.3%) IPR052530 (25.3%)" "Nitroreductase-like (25.3%) Nitroreductase (25.3%) NAD(P)H nitroreductase (25.3%)" STGCPIGFIVWNENQHSNDYNNLEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.3.5 (100%) chorismate synthase (100%) "GO:0008652 (16.7%) GO:0009073 (16.7%) GO:0009423 (16.7%)" GO:0005829 (16.7%) "GO:0004107 (16.7%) GO:0010181 (16.7%)" "amino acid biosynthetic process (16.7%) aromatic amino acid family biosynthetic process (16.7%) chorismate biosynthetic process (16.7%)" cytosol (16.7%) "chorismate synthase activity (16.7%) FMN binding (16.7%)" "IPR000453 (33.3%) IPR020541 (33.3%) IPR035904 (33.3%)" "Chorismate synthase (33.3%) Chorismate synthase, conserved site (33.3%) Chorismate synthase AroC superfamily (33.3%)" LNDAELTPDEKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (48.6%) GO:0004356 (51.4%) glutamine biosynthetic process (48.6%) glutamine synthetase activity (51.4%) "IPR008146 (14.6%) IPR014746 (14.6%) IPR040577 (14.6%)" "Glutamine synthetase, catalytic domain (14.6%) Glutamine synthetase/guanido kinase, catalytic domain (14.6%) Glutamine synthetase, C-terminal (14.6%)" TIIEESQEKMDMAVMYLEEALAHIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006415 (33.3%) GO:0005737 (33.3%) GO:0043023 (33.3%) translational termination (33.3%) cytoplasm (33.3%) ribosomal large subunit binding (33.3%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" DKLIQAVQALEAGGLNLDQSMR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 3.1.11.6 (100%) exodeoxyribonuclease VII (100%) GO:0006308 (25%) "GO:0005829 (25%) GO:0009318 (25%)" GO:0008855 (25%) DNA catabolic process (25%) "cytosol (25%) exodeoxyribonuclease VII complex (25%)" exodeoxyribonuclease VII activity (25%) "IPR003761 (50%) IPR037004 (50%)" "Exonuclease VII, small subunit (50%) Exonuclease VII, small subunit superfamily (50%)" NNDPAQGPVVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "2.3.1.31 (87.5%) 2.3.1.46 (12.5%)" "homoserine O-acetyltransferase (87.5%) homoserine O-succinyltransferase (12.5%)" GO:0019281 (26.4%) GO:0005737 (26.4%) "GO:0008899 (26.4%) GO:0004414 (20.8%)" L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine (26.4%) cytoplasm (26.4%) "homoserine O-succinyltransferase activity (26.4%) homoserine O-acetyltransferase activity (20.8%)" "IPR005697 (33.3%) IPR029062 (33.3%) IPR033752 (33.3%)" "Homoserine O-succinyltransferase MetA (33.3%) Class I glutamine amidotransferase-like (33.3%) MetA family (33.3%)" ICPFAKGGKVGLFGGAGVGK root "7.1.2.2 (96.2%) 3.6.3.14 (3.7%) 3.6.1.15 (0.1%)" "H(+)-transporting two-sector ATPase (96.2%) Transferred entry: 7.1.2.2 (3.7%) nucleoside-triphosphate phosphatase (0.1%)" "GO:0045259 (24.1%) GO:0005886 (21%)" "GO:0005524 (24.1%) GO:0046933 (24.1%) GO:0016787 (5.7%)" "proton-transporting ATP synthase complex (24.1%) plasma membrane (21%)" "ATP binding (24.1%) proton-transporting ATP synthase activity, rotational mechanism (24.1%) hydrolase activity (5.7%)" "IPR027417 (11.1%) IPR050053 (11.1%) IPR000194 (11.1%)" "P-loop containing nucleoside triphosphate hydrolase (11.1%) ATPase alpha/beta chains (11.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11.1%)" GVTYCPHCDGPLFK root "1.8.1.- (87.4%) 1.6.99.3 (5.2%) 1.6.4.- (3.7%)" "With NAD(+) or NADP(+) as acceptor (87.4%) Deleted entry (5.2%) With a disulfide as acceptor (3.7%)" "GO:0000302 (14.1%) GO:0045454 (0%) GO:0006979 (0%)" "GO:0005829 (14.3%) GO:0032991 (14.2%) GO:0009321 (0%)" "GO:0050660 (14.4%) GO:0016668 (14.2%) GO:0051287 (14.1%)" "response to reactive oxygen species (14.1%) cell redox homeostasis (0%) response to oxidative stress (0%)" "cytosol (14.3%) protein-containing complex (14.2%) alkyl hydroperoxide reductase complex (0%)" "flavin adenine dinucleotide binding (14.4%) oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (14.2%) NAD binding (14.1%)" "IPR023753 (11.3%) IPR050097 (11.3%) IPR008255 (11.3%)" "FAD/NAD(P)-binding domain (11.3%) Ferredoxin--NADP reductase type 2 (11.3%) Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (11.3%)" EIAYFFGEGEVCPR root 2.7.4.6 (100%) nucleoside-diphosphate kinase (100%) "GO:0006183 (14.1%) GO:0006228 (14.1%) GO:0006241 (14.1%)" "GO:0005737 (14%) GO:0005829 (0.1%)" "GO:0004550 (14.2%) GO:0005524 (14.1%) GO:0046872 (14.1%)" "GTP biosynthetic process (14.1%) UTP biosynthetic process (14.1%) CTP biosynthetic process (14.1%)" "cytoplasm (14%) cytosol (0.1%)" "nucleoside diphosphate kinase activity (14.2%) ATP binding (14.1%) metal ion binding (14.1%)" "IPR034907 (25.2%) IPR036850 (25.2%) IPR001564 (25%)" "Nucleoside diphosphate kinase-like domain (25.2%) Nucleoside diphosphate kinase-like domain superfamily (25.2%) Nucleoside diphosphate kinase (25%)" GMASGAVIESFLDKGR root "GO:0006413 (0.1%) GO:0009409 (0%) GO:0061077 (0%)" "GO:0005829 (20.7%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0003743 (21%) GO:0005525 (20.7%) GO:0003924 (20.7%)" "translational initiation (0.1%) response to cold (0%) obsolete chaperone-mediated protein folding (0%)" "cytosol (20.7%) cytoplasm (0.1%) membrane (0%)" "translation initiation factor activity (21%) GTP binding (20.7%) GTPase activity (20.7%)" "IPR015760 (7.9%) IPR053905 (7.8%) IPR009000 (7.8%)" "Translation initiation factor IF- 2 (7.9%) Elongation factor G-like, domain II (7.8%) Translation protein, beta-barrel domain superfamily (7.8%)" VEHVAKISANGDEAIGKLIAEAMQR LHEEAMALPSEEEFAER root "3.1.26.12 (96.2%) 3.1.4.- (3.8%)" "ribonuclease E (96.2%) Phosphoric diester hydrolases (3.8%)" "GO:0006364 (10.4%) GO:0008033 (9.7%) GO:0006402 (9.2%)" "GO:0005737 (10.4%) GO:0009898 (9.2%) GO:0005886 (0.5%)" "GO:0008995 (10.3%) GO:0019843 (9.7%) GO:0000049 (9.2%)" "rRNA processing (10.4%) tRNA processing (9.7%) mRNA catabolic process (9.2%)" "cytoplasm (10.4%) cytoplasmic side of plasma membrane (9.2%) plasma membrane (0.5%)" "ribonuclease E activity (10.3%) rRNA binding (9.7%) tRNA binding (9.2%)" "IPR048583 (15.1%) IPR004659 (15%) IPR019307 (14.6%)" "RNase E/G, thioredoxin-like domain (15.1%) Ribonuclease E/G (15%) RNA-binding protein AU-1/Ribonuclease E/G (14.6%)" KAGNVAADGVIK root GO:0006414 (0.2%) "GO:0005737 (49.1%) GO:0005739 (0.1%) GO:0005829 (0.1%)" "GO:0003746 (50.2%) GO:0005085 (0.1%) GO:0008270 (0.1%)" translational elongation (0.2%) "cytoplasm (49.1%) mitochondrion (0.1%) cytosol (0.1%)" "translation elongation factor activity (50.2%) guanyl-nucleotide exchange factor activity (0.1%) zinc ion binding (0.1%)" "IPR001816 (20.1%) IPR018101 (20.1%) IPR036402 (20%)" "Translation elongation factor EFTs/EF1B (20.1%) Translation elongation factor Ts, conserved site (20.1%) Elongation factor Ts, dimerisation domain superfamily (20%)" LNSSVVKEDNAAIR Bacilli Bacteria Bacillati Bacillota Bacilli GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR005996 (25.2%) IPR016082 (25.2%) IPR036919 (25.2%)" "Large ribosomal subunit protein uL30, bacteria (25.2%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (25.2%) Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily (25.2%)" GIASMHCSANTDKEGK Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.3%) GO:0005829 (18.3%) "GO:0004612 (18.3%) GO:0005524 (18.3%) GO:0046872 (17.4%)" gluconeogenesis (18.3%) cytosol (18.3%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.3%) ATP binding (18.3%) metal ion binding (17.4%)" "IPR001272 (25.3%) IPR013035 (25.3%) IPR008210 (24.7%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.3%) Phosphoenolpyruvate carboxykinase, C-terminal (25.3%) Phosphoenolpyruvate carboxykinase, N-terminal (24.7%)" SVDAAKAESAAATLFYFLQMSHDK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) FTKAEDGTNVTYQELAWK Phocaeicola vulgatus Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus IVGEGAPEEEAKQYSSIVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.1.1.31 (100%) 6-phosphogluconolactonase (100%) "GO:0005975 (33.3%) GO:0006098 (33.3%)" GO:0017057 (33.3%) "carbohydrate metabolic process (33.3%) pentose-phosphate shunt (33.3%)" 6-phosphogluconolactonase activity (33.3%) "IPR005900 (25%) IPR006148 (25%) IPR037171 (25%)" "6-phosphogluconolactonase, DevB-type (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) NagB/RpiA transferase-like (25%)" SHHNVGGLPDTMNLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (12.5%) IPR004739 (12.5%) IPR014729 (12.5%)" "GMP synthase, C-terminal (12.5%) GMP synthase, glutamine amidotransferase (12.5%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" GLHPENYRPVVFK Bacteria Bacteria GO:0006412 (24.9%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (24.9%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR002150 (25%) IPR027493 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL31 type A/B (25%) Large ribosomal subunit protein bL31 type B (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" NTEADKVNNVTIVNASK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0033103 (50%) GO:0033104 (50%) protein secretion by the type VI secretion system (50%) type VI protein secretion system complex (50%) IPR035576 (100%) Type VI secretion system TssC (100%) HGESVWNKENR root 5.4.2.11 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (100%) "GO:0006096 (34.1%) GO:0006094 (31.9%)" "GO:0004619 (33.7%) GO:0016868 (0.4%)" "glycolytic process (34.1%) gluconeogenesis (31.9%)" "phosphoglycerate mutase activity (33.7%) intramolecular phosphotransferase activity (0.4%)" "IPR005952 (25.1%) IPR013078 (25.1%) IPR029033 (25.1%)" "Phosphoglycerate mutase 1 (25.1%) Histidine phosphatase superfamily, clade-1 (25.1%) Histidine phosphatase superfamily (25.1%)" MLHNDSHKFESK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.6%) GO:0006164 (0.7%)" GO:0005737 (20.3%) "GO:0004642 (20.3%) GO:0005524 (19.6%) GO:0046872 (19.6%)" "'de novo' IMP biosynthetic process (19.6%) purine nucleotide biosynthetic process (0.7%)" cytoplasm (20.3%) "phosphoribosylformylglycinamidine synthase activity (20.3%) ATP binding (19.6%) metal ion binding (19.6%)" "IPR029062 (11.5%) IPR010073 (11.1%) IPR010918 (11.1%)" "Class I glutamine amidotransferase-like (11.5%) Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%)" YDSTHGRFDGTVEVK root "1.2.1.- (89.3%) 1.2.1.12 (10.7%)" "With NAD(+) or NADP(+) as acceptor (89.3%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (10.7%)" "GO:0006006 (19.4%) GO:0072524 (16.7%) GO:0006096 (0.8%)" "GO:0005737 (0.4%) GO:0005576 (0%) GO:0005829 (0%)" "GO:0051287 (21.5%) GO:0050661 (19.4%) GO:0004365 (15.9%)" "glucose metabolic process (19.4%) pyridine-containing compound metabolic process (16.7%) glycolytic process (0.8%)" "cytoplasm (0.4%) extracellular region (0%) cytosol (0%)" "NAD binding (21.5%) NADP binding (19.4%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (15.9%)" "IPR020828 (17.1%) IPR036291 (17.1%) IPR020831 (17.1%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17.1%) NAD(P)-binding domain superfamily (17.1%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.1%)" MTAITEKLNR Pseudomonadati Bacteria Pseudomonadati "GO:0006412 (16.8%) GO:0006298 (3%)" "GO:0005840 (16.8%) GO:1990904 (16.8%) GO:0005829 (3%)" "GO:0003735 (16.8%) GO:0019843 (14.9%) GO:0003684 (3%)" "translation (16.8%) mismatch repair (3%)" "ribosome (16.8%) ribonucleoprotein complex (16.8%) cytosol (3%)" "structural constituent of ribosome (16.8%) rRNA binding (14.9%) damaged DNA binding (3%)" "IPR012677 (19.5%) IPR012678 (19.5%) IPR013025 (19.5%)" "Nucleotide-binding alpha-beta plait domain superfamily (19.5%) Ribosomal protein uL23/eL15/eS24 core domain superfamily (19.5%) Large ribosomal subunit protein uL23-like (19.5%)" ISGAVMYPNTVSFEDGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006811 (19.9%) "GO:0009279 (19.9%) GO:0046930 (19.9%)" "GO:0015159 (20.4%) GO:0015288 (19.9%)" monoatomic ion transport (19.9%) "cell outer membrane (19.9%) pore complex (19.9%)" "polysaccharide transmembrane transporter activity (20.4%) porin activity (19.9%)" "IPR049712 (25.5%) IPR003715 (24.8%) IPR019554 (24.8%)" "Polysaccharide export protein (25.5%) Polysaccharide export protein, N-terminal domain (24.8%) Soluble ligand binding domain (24.8%)" LVGVIPEDQSVLR root 3.6.1.3 (100%) Deleted entry (100%) "GO:0051782 (16.6%) GO:0000917 (16.2%) GO:0051301 (0.1%)" "GO:0005829 (16.7%) GO:0009898 (16.7%) GO:0005886 (0%)" "GO:0005524 (16.7%) GO:0016887 (16.7%) GO:0042802 (0%)" "negative regulation of cell division (16.6%) division septum assembly (16.2%) cell division (0.1%)" "cytosol (16.7%) cytoplasmic side of plasma membrane (16.7%) plasma membrane (0%)" "ATP binding (16.7%) ATP hydrolysis activity (16.7%) identical protein binding (0%)" "IPR027417 (20.3%) IPR050625 (20.2%) IPR010223 (19.8%)" "P-loop containing nucleoside triphosphate hydrolase (20.3%) ParA/MinD ATPase (20.2%) ATP binding protein MinD (19.8%)" AYQESIGQGHR root 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005960 (16.7%) GO:0005829 (15.3%) GO:0005739 (1.4%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "glycine cleavage complex (16.7%) cytosol (15.3%) mitochondrion (1.4%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" NYEAIPCSEDMQPLMDR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.3.8.- (25%) 1.3.8.1 (25%) 1.3.8.7 (25%)" "With a flavin as acceptor (25%) short-chain acyl-CoA dehydrogenase (25%) medium-chain acyl-CoA dehydrogenase (25%)" "GO:0050660 (48.3%) GO:0003995 (44.8%) GO:0016937 (3.4%)" "flavin adenine dinucleotide binding (48.3%) acyl-CoA dehydrogenase activity (44.8%) short-chain fatty acyl-CoA dehydrogenase activity (3.4%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009075 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.1%)" ALCDVFVMDAFGTAHR root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.6%) GO:0006094 (16.6%) GO:0008615 (0%)" "GO:0005829 (16.6%) GO:0005737 (0%)" "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "glycolytic process (16.6%) gluconeogenesis (16.6%) pyridoxine biosynthetic process (0%)" "cytosol (16.6%) cytoplasm (0%)" "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (25.2%) IPR015824 (25.2%) IPR036043 (25.2%)" "Phosphoglycerate kinase (25.2%) Phosphoglycerate kinase, N-terminal (25.2%) Phosphoglycerate kinase superfamily (25.2%)" AQEQFGFLMNAFK Bacteria Bacteria 6.1.1.12 (100%) aspartate--tRNA ligase (100%) GO:0006422 (20.2%) GO:0005737 (19.8%) "GO:0004815 (20.2%) GO:0005524 (20.2%) GO:0003676 (19.2%)" aspartyl-tRNA aminoacylation (20.2%) cytoplasm (19.8%) "aspartate-tRNA ligase activity (20.2%) ATP binding (20.2%) nucleic acid binding (19.2%)" "IPR004364 (9.3%) IPR045864 (9.3%) IPR002312 (9.3%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (9.3%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (9.3%) Aspartyl/Asparaginyl-tRNA synthetase, class IIb (9.3%)" CETDFVAQNADFVK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006414 (0.7%) GO:0005737 (49%) GO:0003746 (50.3%) translational elongation (0.7%) cytoplasm (49%) translation elongation factor activity (50.3%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" IADAFSNDANTK Bacteria Bacteria 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.2%) IPR015824 (33.2%) IPR036043 (33.2%)" "Phosphoglycerate kinase (33.2%) Phosphoglycerate kinase, N-terminal (33.2%) Phosphoglycerate kinase superfamily (33.2%)" NAQIETSFGFDTACK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" VNLYGGGFTGQSQALR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022627 (25%) "GO:0003723 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "RNA binding (25%) structural constituent of ribosome (25%)" "IPR000754 (20%) IPR014721 (20%) IPR020568 (20%)" "Small ribosomal subunit protein uS9 (20%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (20%) Ribosomal protein uS5 domain 2-type superfamily (20%)" SGDYIMKPIRK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (71.4%) GO:0004340 (28.6%)" "kinase activity (71.4%) glucokinase activity (28.6%)" "IPR000600 (34.1%) IPR049874 (34.1%) IPR043129 (31.8%)" "ROK family (34.1%) ROK, conserved site (34.1%) ATPase, nucleotide binding domain (31.8%)" ALEVADKANPDMASMVEGIELTLK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0006457 (16.7%) GO:0005829 (16.7%) "GO:0000774 (16.7%) GO:0042803 (16.7%) GO:0051082 (16.7%)" protein folding (16.7%) cytosol (16.7%) "adenyl-nucleotide exchange factor activity (16.7%) protein homodimerization activity (16.7%) unfolded protein binding (16.7%)" "IPR000740 (34.2%) IPR013805 (34.2%) IPR009012 (31.6%)" "GrpE nucleotide exchange factor (34.2%) GrpE nucleotide exchange factor, coiled-coil (34.2%) GrpE nucleotide exchange factor, head (31.6%)" TDFYKPVSCHLYPIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR021458 (100%) Rv0495c-like (100%) LEGATMDMLGTAEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.9%) GO:0005737 (16.1%) "GO:0005524 (16.9%) GO:0016853 (16.9%) GO:0140662 (16.9%)" protein refolding (16.9%) cytoplasm (16.1%) "ATP binding (16.9%) isomerase activity (16.9%) ATP-dependent protein folding chaperone (16.9%)" "IPR001844 (17.1%) IPR002423 (17.1%) IPR027409 (17.1%)" "Chaperonin Cpn60/GroEL (17.1%) Chaperonin Cpn60/GroEL/TCP-1 family (17.1%) GroEL-like apical domain superfamily (17.1%)" AVAEDGEPCVTYIGADGAGHYVK root 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25.1%) GO:0019521 (25.1%) GO:0016054 (0.2%)" GO:0005829 (0%) "GO:0004616 (25.1%) GO:0050661 (24%) GO:0016491 (0.2%)" "pentose-phosphate shunt (25.1%) D-gluconate metabolic process (25.1%) organic acid catabolic process (0.2%)" cytosol (0%) "phosphogluconate dehydrogenase (decarboxylating) activity (25.1%) NADP binding (24%) oxidoreductase activity (0.2%)" "IPR006183 (12.8%) IPR006114 (12.8%) IPR008927 (12.8%)" "6-phosphogluconate dehydrogenase (12.8%) 6-phosphogluconate dehydrogenase, C-terminal (12.8%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (12.8%)" AMTPGCTVQACGLR root "1.11.1.24 (96.9%) 1.11.1.15 (2.7%) 1.11.1.7 (0.3%)" "thioredoxin-dependent peroxiredoxin (96.9%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (2.7%) peroxidase (0.3%)" "GO:0034599 (24.9%) GO:0045454 (24.9%) GO:0006520 (0%)" "GO:0005737 (24.9%) GO:0005829 (0%)" "GO:0008379 (24.9%) GO:0004601 (0.4%) GO:0140825 (0.1%)" "cellular response to oxidative stress (24.9%) cell redox homeostasis (24.9%) amino acid metabolic process (0%)" "cytoplasm (24.9%) cytosol (0%)" "thioredoxin peroxidase activity (24.9%) peroxidase activity (0.4%) lactoperoxidase activity (0.1%)" "IPR000866 (20.7%) IPR036249 (20.7%) IPR013766 (20.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (20.7%) Thioredoxin-like superfamily (20.7%) Thioredoxin domain (20.7%)" LAVEHMTPVILLTDAFIANGSSAWR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.5%) IPR002880 (12.5%) IPR009014 (12.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" VFQVAKENNFALPAVNCVGTDSINAVLETAAK root "4.1.2.13 (99.8%) 4.1.2.- (0.2%)" "fructose-bisphosphate aldolase (99.8%) Aldehyde-lyases (0.2%)" "GO:0006094 (19.9%) GO:0006096 (19.9%)" GO:0005829 (19.9%) "GO:0004332 (19.9%) GO:0008270 (19.9%) GO:0016829 (0.2%)" "gluconeogenesis (19.9%) glycolytic process (19.9%)" cytosol (19.9%) "fructose-bisphosphate aldolase activity (19.9%) zinc ion binding (19.9%) lyase activity (0.2%)" "IPR000771 (33.3%) IPR006411 (33.3%) IPR013785 (33.3%)" "Fructose-bisphosphate aldolase, class-II (33.3%) Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype (33.3%) Aldolase-type TIM barrel (33.3%)" LMPDDIDGGTFTITNFGTFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0006099 (0.8%) "GO:0005737 (32.5%) GO:0005829 (0.8%)" "GO:0016407 (32.5%) GO:0031405 (32.5%) GO:0004149 (0.8%)" tricarboxylic acid cycle (0.8%) "cytoplasm (32.5%) cytosol (0.8%)" "acetyltransferase activity (32.5%) lipoic acid binding (32.5%) dihydrolipoyllysine-residue succinyltransferase activity (0.8%)" "IPR000089 (12.5%) IPR001078 (12.5%) IPR003016 (12.5%)" "Biotin/lipoyl attachment (12.5%) 2-oxoacid dehydrogenase acyltransferase, catalytic domain (12.5%) 2-oxo acid dehydrogenase, lipoyl-binding site (12.5%)" AVQLGGVALGTTQVINSK root "1.16.-.- (99.5%) 1.16.3.1 (0.5%)" "Oxidizing metal ions (99.5%) ferroxidase (0.5%)" "GO:0006879 (14.3%) GO:0030261 (14.3%) GO:0006950 (0%)" "GO:0005737 (14.3%) GO:0009295 (13.3%) GO:0016020 (0.1%)" "GO:0008199 (14.7%) GO:0016722 (14.6%) GO:0003677 (14.3%)" "intracellular iron ion homeostasis (14.3%) chromosome condensation (14.3%) response to stress (0%)" "cytoplasm (14.3%) nucleoid (13.3%) membrane (0.1%)" "ferric iron binding (14.7%) oxidoreductase activity, acting on metal ions (14.6%) DNA binding (14.3%)" "IPR002177 (16.7%) IPR008331 (16.7%) IPR009078 (16.7%)" "DNA-binding protein Dps (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like superfamily (16.7%)" VVSWYDNEIGYSNK Bacteria Bacteria "1.2.1.- (97.5%) 1.2.1.12 (2.5%)" "With NAD(+) or NADP(+) as acceptor (97.5%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (2.5%)" "GO:0006006 (24.5%) GO:0006096 (0.7%) GO:0072524 (0.1%)" GO:0005737 (0.2%) "GO:0050661 (24.5%) GO:0051287 (24.5%) GO:0004365 (13.9%)" "glucose metabolic process (24.5%) glycolytic process (0.7%) pyridine-containing compound metabolic process (0.1%)" cytoplasm (0.2%) "NADP binding (24.5%) NAD binding (24.5%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (13.9%)" "IPR020829 (17%) IPR020831 (17%) IPR020830 (16.5%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17%) Glyceraldehyde 3-phosphate dehydrogenase, active site (16.5%)" VIHAGLECGIIGAIIPGLDMISFGPTLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) "GO:0006508 (25%) GO:0043171 (0.3%)" GO:0005829 (25%) "GO:0070573 (25%) GO:0046872 (24.7%)" "proteolysis (25%) peptide catabolic process (0.3%)" cytosol (25%) "metallodipeptidase activity (25%) metal ion binding (24.7%)" "IPR001160 (29.6%) IPR011650 (29.6%) IPR002933 (29.3%)" "Peptidase M20C, Xaa-His dipeptidase (29.6%) Peptidase M20, dimerisation domain (29.6%) Peptidase M20 (29.3%)" TYVNVNIHKEENQDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" AGYLTVDTLKEANANK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004824 (16.7%)" lysyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) lysine-tRNA ligase activity (16.7%)" "IPR002313 (11.1%) IPR004364 (11.1%) IPR004365 (11.1%)" "Lysine-tRNA ligase, class II (11.1%) Aminoacyl-tRNA synthetase, class II (D/K/N) (11.1%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.1%)" AGPVLMEPIMQMEVVTPEESMGDVIGDLNKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" NALSSEQLFELFDHFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) GO:0071897 (24.7%) "GO:0000166 (24.7%) GO:0004748 (24.7%) GO:0031419 (24.7%)" DNA biosynthetic process (24.7%) "nucleotide binding (24.7%) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (24.7%) cobalamin binding (24.7%)" "IPR000788 (33.3%) IPR013344 (33.3%) IPR050862 (33.3%)" "Ribonucleotide reductase large subunit, C-terminal (33.3%) Ribonucleotide reductase, adenosylcobalamin-dependent (33.3%) Ribonucleoside diphosphate reductase class-2 (33.3%)" YRLPKEDPIDILEIDNTAVRNEQIAALK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (16.7%) IPR006099 (16.7%) IPR006158 (16.7%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-binding domain (16.7%)" LENNEKIQVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.1%) "GO:0003746 (25.1%) GO:0005525 (25.1%) GO:0003924 (24.8%)" ribosome disassembly (25.1%) "translation elongation factor activity (25.1%) GTP binding (25.1%) GTPase activity (24.8%)" "IPR005517 (7.6%) IPR009000 (7.6%) IPR014721 (7.6%)" "Translation elongation factor EFG/EF2, domain IV (7.6%) Translation protein, beta-barrel domain superfamily (7.6%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (7.6%)" QYPAEAAELFAAAEENAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (83.3%) 1.2.7.- (16.7%)" "pyruvate synthase (83.3%) With an iron-sulfur protein as acceptor (16.7%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (13.1%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (13.1%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" TGGDGALVFNVDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) ACEEAAEGQVVSPVNFNSPGQVVIAGHK root "2.3.1.39 (99.4%) 2.3.1.180 (0.6%)" "[acyl-carrier-protein] S-malonyltransferase (99.4%) beta-ketoacyl-[acyl-carrier-protein] synthase III (0.6%)" GO:0006633 (33%) GO:0005829 (32.8%) "GO:0004314 (33%) GO:0016746 (0.9%) GO:0004315 (0.2%)" fatty acid biosynthetic process (33%) cytosol (32.8%) "[acyl-carrier-protein] S-malonyltransferase activity (33%) acyltransferase activity (0.9%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (0.2%)" "IPR001227 (14.4%) IPR014043 (14.4%) IPR016035 (14.4%)" "Acyl transferase domain superfamily (14.4%) Acyl transferase domain (14.4%) Acyl transferase/acyl hydrolase/lysophospholipase (14.4%)" LEGMKENVICGHLIPAGTGQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) GO:0000428 (17.4%) "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (15.1%)" DNA-templated transcription (17%) DNA-directed RNA polymerase complex (17.4%) "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (15.1%)" "IPR007081 (9.4%) IPR045867 (9.3%) IPR007083 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.4%) DNA-directed RNA polymerase, subunit beta-prime (9.3%) RNA polymerase Rpb1, domain 4 (9.1%)" MARTIRERMNVRDNEVFTPIDLINAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (19.9%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (19.9%)" "IPR007645 (7.8%) IPR015712 (7.8%) IPR019462 (7.8%)" "RNA polymerase Rpb2, domain 3 (7.8%) DNA-directed RNA polymerase, subunit 2 (7.8%) DNA-directed RNA polymerase, beta subunit, external 1 domain (7.8%)" HLDEEVAR root "3.13.2.1 (87.1%) 3.3.1.1 (12.7%) 3.4.22.- (0.2%)" "adenosylhomocysteinase (87.1%) Transferred entry: 3.13.2.1 (12.7%) Cysteine endopeptidases (0.2%)" "GO:0033353 (19.2%) GO:0006730 (19.1%) GO:0071269 (16.9%)" "GO:0005829 (19.2%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0004013 (19.2%) GO:0003857 (1.1%) GO:0004300 (1.1%)" "S-adenosylmethionine cycle (19.2%) one-carbon metabolic process (19.1%) L-homocysteine biosynthetic process (16.9%)" "cytosol (19.2%) cytoplasm (0%) membrane (0%)" "adenosylhomocysteinase activity (19.2%) (3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (1.1%) enoyl-CoA hydratase activity (1.1%)" "IPR000043 (19.3%) IPR042172 (19.3%) IPR015878 (19.2%)" "Adenosylhomocysteinase-like (19.3%) Adenosylhomocysteinase-like superfamily (19.3%) S-adenosyl-L-homocysteine hydrolase, NAD binding domain (19.2%)" AGELLKENGFNFDKAYTSYLKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.2.11 (95.5%) 5.4.2.1 (4.5%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (95.5%) Transferred entry: 5.4.2.11 and 5.4.2.12 (4.5%)" "GO:0006094 (33.3%) GO:0006096 (33.3%)" GO:0004619 (33.3%) "gluconeogenesis (33.3%) glycolytic process (33.3%)" phosphoglycerate mutase activity (33.3%) "IPR001345 (25%) IPR005952 (25%) IPR013078 (25%)" "Phosphoglycerate/bisphosphoglycerate mutase, active site (25%) Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%)" INDEKAFWSLGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GGISIYPYCNYGRPNTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.7.1.13 (100%) preQ1 synthase (100%) "GO:0006400 (25%) GO:0008616 (25%)" GO:0005737 (25%) GO:0033739 (25%) "tRNA modification (25%) tRNA queuosine(34) biosynthetic process (25%)" cytoplasm (25%) preQ1 synthase activity (25%) "IPR016856 (25%) IPR029500 (25%) IPR043133 (25%)" "NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 (25%) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF (25%) GTP cyclohydrolase I, C-terminal/NADPH-dependent 7-cyano-7-deazaguanine reductase (25%)" EMSQENYDKLADVMR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.5.1.108 (50%) 4.2.1.59 (50%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase (50%) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (50%)" "GO:0006633 (14.3%) GO:0009245 (14.3%)" "GO:0005737 (14.3%) GO:0016020 (14.3%)" "GO:0046872 (14.3%) GO:0103117 (14.3%) GO:0019171 (12.2%)" "fatty acid biosynthetic process (14.3%) lipid A biosynthetic process (14.3%)" "cytoplasm (14.3%) membrane (14.3%)" "metal ion binding (14.3%) UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.3%) (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (12.2%)" "IPR004463 (14.3%) IPR010084 (14.3%) IPR011334 (14.3%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.3%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (14.3%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.3%)" ADYADSLTENGTHGSDSVESAAR root 2.7.4.6 (100%) nucleoside-diphosphate kinase (100%) "GO:0006183 (14.1%) GO:0006228 (14.1%) GO:0006241 (14.1%)" "GO:0005737 (13.9%) GO:0005829 (0.1%)" "GO:0004550 (14.2%) GO:0005524 (14.1%) GO:0046872 (14.1%)" "GTP biosynthetic process (14.1%) UTP biosynthetic process (14.1%) CTP biosynthetic process (14.1%)" "cytoplasm (13.9%) cytosol (0.1%)" "nucleoside diphosphate kinase activity (14.2%) ATP binding (14.1%) metal ion binding (14.1%)" "IPR023005 (25.1%) IPR034907 (25.1%) IPR036850 (25.1%)" "Nucleoside diphosphate kinase, active site (25.1%) Nucleoside diphosphate kinase-like domain (25.1%) Nucleoside diphosphate kinase-like domain superfamily (25.1%)" AYADDKAIVGGIAR root "2.1.3.15 (96%) 6.4.1.2 (4%)" "acetyl-CoA carboxytransferase (96%) acetyl-CoA carboxylase (4%)" "GO:0006633 (16.6%) GO:2001295 (16.5%) GO:0006260 (0%)" "GO:0009317 (16.6%) GO:0005737 (0%) GO:0005829 (0%)" "GO:0003989 (16.6%) GO:0005524 (16.6%) GO:0016743 (16.6%)" "fatty acid biosynthetic process (16.6%) malonyl-CoA biosynthetic process (16.5%) DNA replication (0%)" "acetyl-CoA carboxylase complex (16.6%) cytoplasm (0%) cytosol (0%)" "acetyl-CoA carboxylase activity (16.6%) ATP binding (16.6%) carboxyl- or carbamoyltransferase activity (16.6%)" "IPR001095 (33.2%) IPR011763 (33.2%) IPR029045 (33.2%)" "Acetyl-CoA carboxylase, alpha subunit (33.2%) Acetyl-coenzyme A carboxyltransferase, C-terminal (33.2%) ClpP/crotonase-like domain superfamily (33.2%)" KHQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGK root "GO:0006412 (16.6%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (17%) GO:1990904 (16.5%) GO:0005829 (16.3%)" "GO:0003735 (16.6%) GO:0019843 (16.6%) GO:0000049 (0.1%)" "translation (16.6%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (17%) ribonucleoprotein complex (16.5%) cytosol (16.3%)" "structural constituent of ribosome (16.6%) rRNA binding (16.6%) tRNA binding (0.1%)" "IPR003256 (14.4%) IPR008991 (14.4%) IPR014722 (14.4%)" "Large ribosomal subunit protein uL24 (14.4%) Translation protein SH3-like domain superfamily (14.4%) Large ribosomal subunit protein uL2, domain 2 (14.4%)" EIEFQSLEMELCEKR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" GNIGVTTENIFPIIK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0006457 (0.2%) GO:0006974 (0.2%) GO:0009408 (0.2%)" "GO:0005737 (6.6%) GO:0005829 (0.2%)" "GO:0005524 (22.6%) GO:0016887 (22.6%) GO:0051082 (22.6%)" "protein folding (0.2%) DNA damage response (0.2%) response to heat (0.2%)" "cytoplasm (6.6%) cytosol (0.2%)" "ATP binding (22.6%) ATP hydrolysis activity (22.6%) unfolded protein binding (22.6%)" "IPR001404 (18.2%) IPR019805 (18.2%) IPR020575 (18.2%)" "Heat shock protein Hsp90 family (18.2%) Heat shock protein Hsp90, conserved site (18.2%) Heat shock protein Hsp90, N-terminal (18.2%)" VALVASHFENKECEVESR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.4.2.3 (100%) uridine phosphorylase (100%) GO:0006152 (33%) GO:0005829 (33%) "GO:0004731 (33%) GO:0004850 (1.1%)" purine nucleoside catabolic process (33%) cytosol (33%) "purine-nucleoside phosphorylase activity (33%) uridine phosphorylase activity (1.1%)" "IPR000845 (50%) IPR035994 (50%)" "Nucleoside phosphorylase domain (50%) Nucleoside phosphorylase superfamily (50%)" KMGAQTAEANINAGIAAAR Pseudomonadati Bacteria Pseudomonadati "1.1.1.290 (50%) 1.1.1.95 (40%) 1.1.1.81 (10%)" "4-phosphoerythronate dehydrogenase (50%) phosphoglycerate dehydrogenase (40%) hydroxypyruvate reductase (10%)" "GO:0051287 (48.1%) GO:0016616 (40.9%) GO:0016787 (3.9%)" "NAD binding (48.1%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (40.9%) hydrolase activity (3.9%)" "IPR006140 (32.2%) IPR036291 (32.2%) IPR006139 (31.9%)" "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (32.2%) NAD(P)-binding domain superfamily (32.2%) D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (31.9%)" VDFNVPLDENGKITDDTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (32.4%) IPR015824 (32.4%) IPR036043 (32.4%)" "Phosphoglycerate kinase (32.4%) Phosphoglycerate kinase, N-terminal (32.4%) Phosphoglycerate kinase superfamily (32.4%)" GCYVQASNKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006004 (25%) GO:0016139 (25%)" GO:0005764 (25%) GO:0004560 (25%) "fucose metabolic process (25%) glycoside catabolic process (25%)" lysosome (25%) alpha-L-fucosidase activity (25%) "IPR000421 (20%) IPR000933 (20%) IPR008979 (20%)" "Coagulation factor 5/8, C-terminal domain (20%) Glycoside hydrolase, family 29 (20%) Galactose-binding-like domain superfamily (20%)" GNGISPMEWYNLLGK Escherichia coli Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli "2.5.1.56 (50%) 2.5.1.57 (33.3%) 1.2.4.1 (16.7%)" "N-acetylneuraminate synthase (50%) N-acylneuraminate-9-phosphate synthase (33.3%) pyruvate dehydrogenase (acetyl-transferring) (16.7%)" "GO:0016051 (29.4%) GO:0070085 (29.4%)" "GO:0047444 (29.4%) GO:0050462 (8.8%) GO:0004739 (2.9%)" "carbohydrate biosynthetic process (29.4%) obsolete glycosylation (29.4%)" "N-acylneuraminate-9-phosphate synthase activity (29.4%) N-acetylneuraminate synthase activity (8.8%) pyruvate dehydrogenase (acetyl-transferring) activity (2.9%)" "IPR006190 (14.5%) IPR013132 (14.5%) IPR013785 (14.5%)" "Antifreeze-like/N-acetylneuraminic acid synthase, SAF domain (14.5%) PseI/NeuA/B-like (14.5%) Aldolase-type TIM barrel (14.5%)" LRNPSYYPEGSDYLAEYIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.3.1.1 (95%) 1.3.98.1 (5%)" "dihydrouracil dehydrogenase (NAD(+)) (95%) dihydroorotate oxidase (fumarate) (5%)" "GO:0006210 (13.5%) GO:0006212 (13.5%) GO:0044205 (12%)" GO:0005737 (14.3%) "GO:0002058 (13.5%) GO:0004152 (13.5%) GO:0050661 (13.5%)" "thymine catabolic process (13.5%) uracil catabolic process (13.5%) 'de novo' UMP biosynthetic process (12%)" cytoplasm (14.3%) "uracil binding (13.5%) dihydroorotate dehydrogenase activity (13.5%) NADP binding (13.5%)" "IPR005720 (32.8%) IPR012135 (32.8%) IPR013785 (32.8%)" "Dihydroorotate dehydrogenase, catalytic (32.8%) Dihydroorotate dehydrogenase, class 1/ 2 (32.8%) Aldolase-type TIM barrel (32.8%)" YSAGNFYINDKPTGAVIAQQPFGGSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (25.6%) GO:0009898 (25.6%) "GO:0003842 (25.6%) GO:0004657 (23.3%)" L-proline catabolic process to L-glutamate (25.6%) cytoplasmic side of plasma membrane (25.6%) "L-glutamate gamma-semialdehyde dehydrogenase activity (25.6%) proline dehydrogenase activity (23.3%)" "IPR005931 (14.3%) IPR015590 (14.3%) IPR016160 (14.3%)" "Delta-1-pyrroline-5-carboxylate dehydrogenase (14.3%) Aldehyde dehydrogenase domain (14.3%) Aldehyde dehydrogenase, cysteine active site (14.3%)" HVQEEAELNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.-.-.- (100%) Hydrolases (100%) GO:0005829 (25%) "GO:0000287 (25%) GO:0016289 (25%) GO:0016791 (25%)" cytosol (25%) "magnesium ion binding (25%) acyl-CoA hydrolase activity (25%) phosphatase activity (25%)" "IPR000150 (14.3%) IPR003736 (14.3%) IPR006379 (14.3%)" "Cof family (14.3%) Phenylacetic acid degradation-related domain (14.3%) HAD-superfamily hydrolase, subfamily IIB (14.3%)" VSLANLNEKDYVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "4.1.1.12 (94.1%) 2.6.1.1 (5.9%)" "aspartate 4-decarboxylase (94.1%) aspartate transaminase (5.9%)" GO:0006520 (27.3%) "GO:0030170 (27.3%) GO:0008483 (24.7%) GO:0047688 (10.4%)" amino acid metabolic process (27.3%) "pyridoxal phosphate binding (27.3%) transaminase activity (24.7%) aspartate 4-decarboxylase activity (10.4%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" KFTEQLLSPEQVELILK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.5.1.38 (100%) FMN reductase (NADPH) (100%) "GO:0016491 (55.6%) GO:0052873 (44.4%)" "oxidoreductase activity (55.6%) FMN reductase (NADPH) activity (44.4%)" "IPR000415 (33.3%) IPR029479 (33.3%) IPR050627 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase/BluB (33.3%)" GVIVYMNQEGR root "3.5.4.25 (50.7%) 4.1.99.12 (49.3%)" "GTP cyclohydrolase II (50.7%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (49.3%)" GO:0009231 (12.7%) GO:0005829 (12.7%) "GO:0003935 (12.7%) GO:0005525 (12.7%) GO:0008686 (12.5%)" riboflavin biosynthetic process (12.7%) cytosol (12.7%) "GTP cyclohydrolase II activity (12.7%) GTP binding (12.7%) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (12.5%)" "IPR032677 (16.9%) IPR036144 (16.9%) IPR000926 (16.8%)" "GTP cyclohydrolase II (16.9%) GTP cyclohydrolase II superfamily (16.9%) GTP cyclohydrolase II, RibA (16.8%)" AVGGVDLFLGGIGPDGHIAFNEPGSSLSSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (13.1%) GO:0005737 (1.2%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (13.1%) cytoplasm (1.2%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" GIIVCDEAACADLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (11.4%) GO:0005737 (2.9%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (11.4%) cytoplasm (2.9%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" VVYPWTQR root "GO:0042744 (8%) GO:0015671 (0.3%) GO:0048821 (0.2%)" "GO:0005833 (9.1%) GO:0031838 (8.2%) GO:0072562 (7.9%)" "GO:0019825 (9.1%) GO:0020037 (9.1%) GO:0005344 (9.1%)" "hydrogen peroxide catabolic process (8%) oxygen transport (0.3%) erythrocyte development (0.2%)" "hemoglobin complex (9.1%) haptoglobin-hemoglobin complex (8.2%) blood microparticle (7.9%)" "oxygen binding (9.1%) heme binding (9.1%) oxygen carrier activity (9.1%)" "IPR000971 (20%) IPR009050 (20%) IPR012292 (20%)" "Globin (20%) Globin-like superfamily (20%) Globin/Protoglobin (20%)" SYLYDGGTGERFDQPATVGVTYFLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (17.6%) GO:0006508 (5.9%)" GO:0000428 (17.6%) "GO:0003677 (17.6%) GO:0003899 (17.6%) GO:0032549 (17.6%)" "DNA-templated transcription (17.6%) proteolysis (5.9%)" DNA-directed RNA polymerase complex (17.6%) "DNA binding (17.6%) DNA-directed RNA polymerase activity (17.6%) ribonucleoside binding (17.6%)" "IPR007120 (7.7%) IPR007641 (7.7%) IPR015712 (7.7%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.7%) RNA polymerase Rpb2, domain 7 (7.7%) DNA-directed RNA polymerase, subunit 2 (7.7%)" ESSVPFSYYDNQQK root "GO:0006865 (33.2%) GO:0015813 (0%) GO:0070778 (0%)" "GO:0005576 (33.2%) GO:0030288 (33.2%) GO:0042597 (0.1%)" "GO:0016595 (0%) GO:0070335 (0%)" "amino acid transport (33.2%) L-glutamate transmembrane transport (0%) L-aspartate transmembrane transport (0%)" "extracellular region (33.2%) outer membrane-bounded periplasmic space (33.2%) periplasmic space (0.1%)" "glutamate binding (0%) aspartate binding (0%)" "IPR051455 (50.2%) IPR001638 (49.8%)" "Bacterial solute-binding protein 3 (50.2%) Solute-binding protein family 3/N-terminal domain of MltF (49.8%)" SKGITGEVLLQLLEGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" YGVAEFDKDGNCLSIEEKPAQPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.24 (100%) glucose-1-phosphate thymidylyltransferase (100%) "GO:0008879 (50%) GO:0046872 (50%)" "glucose-1-phosphate thymidylyltransferase activity (50%) metal ion binding (50%)" "IPR005835 (33.3%) IPR005907 (33.3%) IPR029044 (33.3%)" "Nucleotidyl transferase domain (33.3%) Glucose-1-phosphate thymidylyltransferase, short form (33.3%) Nucleotide-diphospho-sugar transferases (33.3%)" AGAEGAQIIENPILSNFKEGLSVLEYFISTHGAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0000287 (16.3%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) magnesium ion binding (16.3%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" KEIEAAGYELVLLEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.95 (72.7%) 1.1.1.81 (18.2%) 1.1.1.290 (9.1%)" "phosphoglycerate dehydrogenase (72.7%) hydroxypyruvate reductase (18.2%) 4-phosphoerythronate dehydrogenase (9.1%)" "GO:0051287 (49.5%) GO:0016616 (37.9%) GO:0004617 (9.5%)" "NAD binding (49.5%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (37.9%) phosphoglycerate dehydrogenase activity (9.5%)" "IPR006139 (34%) IPR036291 (33.3%) IPR006140 (32.6%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (34%) NAD(P)-binding domain superfamily (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (32.6%)" EGVSYKEIQGTPEEQKEMEESYAHLCK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (35.1%) "GO:0016615 (29.7%) GO:0016616 (29.7%) GO:0030060 (5.4%)" malate metabolic process (35.1%) "malate dehydrogenase activity (29.7%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (29.7%) L-malate dehydrogenase (NAD+) activity (5.4%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" NMVLFPGVAMPVIIGRPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.21.53 (100%) endopeptidase La (100%) "GO:0006515 (12.5%) GO:0034605 (12.5%)" GO:0005737 (12.5%) "GO:0004176 (12.5%) GO:0004252 (12.5%) GO:0005524 (12.5%)" "protein quality control for misfolded or incompletely synthesized proteins (12.5%) cellular response to heat (12.5%)" cytoplasm (12.5%) "ATP-dependent peptidase activity (12.5%) serine-type endopeptidase activity (12.5%) ATP binding (12.5%)" "IPR003111 (7.1%) IPR003593 (7.1%) IPR003959 (7.1%)" "Lon protease, N-terminal domain (7.1%) AAA+ ATPase domain (7.1%) ATPase, AAA-type, core (7.1%)" SIGATTHVGVTASSDTFYPGQER root 2.4.2.3 (100%) uridine phosphorylase (100%) "GO:0009164 (20%) GO:0009166 (20%) GO:0044206 (18.1%)" "GO:0005829 (20.4%) GO:0032991 (0%)" "GO:0004850 (20.3%) GO:0016757 (0.3%) GO:0003824 (0.1%)" "nucleoside catabolic process (20%) nucleotide catabolic process (20%) UMP salvage (18.1%)" "cytosol (20.4%) protein-containing complex (0%)" "uridine phosphorylase activity (20.3%) glycosyltransferase activity (0.3%) catalytic activity (0.1%)" "IPR000845 (25.2%) IPR035994 (25.2%) IPR010058 (24.8%)" "Nucleoside phosphorylase domain (25.2%) Nucleoside phosphorylase superfamily (25.2%) Uridine phosphorylase (24.8%)" SPNHPVTR Bacteria Bacteria "1.2.7.1 (87.9%) 1.2.7.- (12.1%)" "pyruvate synthase (87.9%) With an iron-sulfur protein as acceptor (12.1%)" "GO:0006979 (16.7%) GO:0022900 (16.4%) GO:0016117 (0.3%)" "GO:0051539 (16.7%) GO:0005506 (16.4%) GO:0030976 (15.4%)" "response to oxidative stress (16.7%) electron transport chain (16.4%) carotenoid biosynthetic process (0.3%)" "4 iron, 4 sulfur cluster binding (16.7%) iron ion binding (16.4%) thiamine pyrophosphate binding (15.4%)" "IPR002880 (7.7%) IPR009014 (7.7%) IPR029061 (7.7%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%) Thiamin diphosphate-binding fold (7.7%)" ALGVYSEIYPHDITVEELK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0006177 (0.4%) GO:0005829 (32.9%) "GO:0003921 (32.9%) GO:0005524 (32.9%) GO:0016740 (0.9%)" GMP biosynthetic process (0.4%) cytosol (32.9%) "GMP synthase activity (32.9%) ATP binding (32.9%) transferase activity (0.9%)" "IPR017926 (16.9%) IPR025777 (16.7%) IPR029062 (16.7%)" "Glutamine amidotransferase (16.9%) GMP synthetase ATP pyrophosphatase domain (16.7%) Class I glutamine amidotransferase-like (16.7%)" EVITNLFFSEKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (18.3%) GO:0006508 (4.3%)" GO:0000428 (18.3%) "GO:0003677 (18.3%) GO:0003899 (18.3%) GO:0032549 (18.3%)" "DNA-templated transcription (18.3%) proteolysis (4.3%)" DNA-directed RNA polymerase complex (18.3%) "DNA binding (18.3%) DNA-directed RNA polymerase activity (18.3%) ribonucleoside binding (18.3%)" "IPR007120 (7.6%) IPR007121 (7.6%) IPR007641 (7.6%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.6%) RNA polymerase, beta subunit, conserved site (7.6%) RNA polymerase Rpb2, domain 7 (7.6%)" ILAEWLTALRK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.7.1.35 (100%) pyridoxal kinase (100%) "GO:0009443 (15.3%) GO:0036172 (0.1%)" GO:0005829 (15.3%) "GO:0008478 (15.4%) GO:0008902 (15.3%) GO:0005524 (13.4%)" "pyridoxal 5'-phosphate salvage (15.3%) thiamine salvage (0.1%)" cytosol (15.3%) "pyridoxal kinase activity (15.4%) hydroxymethylpyrimidine kinase activity (15.3%) ATP binding (13.4%)" "IPR029056 (26.5%) IPR004625 (26.3%) IPR013749 (25.6%)" "Ribokinase-like (26.5%) Pyridoxine kinase (26.3%) Pyridoxamine kinase/Phosphomethylpyrimidine kinase (25.6%)" KLMDDTIAQVQTSGEAEKWFDKWFK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006865 (32.5%) GO:0015813 (0.3%) GO:0070778 (0.3%)" "GO:0005576 (32.5%) GO:0030288 (32.5%) GO:0016020 (0.3%)" "GO:0016595 (0.3%) GO:0070335 (0.3%)" "amino acid transport (32.5%) L-glutamate transmembrane transport (0.3%) L-aspartate transmembrane transport (0.3%)" "extracellular region (32.5%) outer membrane-bounded periplasmic space (32.5%) membrane (0.3%)" "glutamate binding (0.3%) aspartate binding (0.3%)" "IPR001638 (50%) IPR051455 (50%)" "Solute-binding protein family 3/N-terminal domain of MltF (50%) Bacterial solute-binding protein 3 (50%)" SYPLDIHTVQEHLKELADRYAIVANDVR root 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0006879 (13.3%) GO:0030261 (13.3%)" "GO:0005737 (13.3%) GO:0009295 (11.7%) GO:0016020 (1.7%)" "GO:0008199 (16.7%) GO:0016722 (16.7%) GO:0003677 (13.3%)" "intracellular iron ion homeostasis (13.3%) chromosome condensation (13.3%)" "cytoplasm (13.3%) nucleoid (11.7%) membrane (1.7%)" "ferric iron binding (16.7%) oxidoreductase activity, acting on metal ions (16.7%) DNA binding (13.3%)" "IPR002177 (16.9%) IPR008331 (16.9%) IPR009078 (16.9%)" "DNA-binding protein Dps (16.9%) Ferritin/DPS domain (16.9%) Ferritin-like superfamily (16.9%)" HVPVYITEDMVGHK root "GO:0000028 (16.6%) GO:0006412 (16.6%)" "GO:0005737 (16.6%) GO:0015935 (16.6%) GO:0005840 (0.1%)" "GO:0003735 (16.6%) GO:0019843 (16.6%)" "ribosomal small subunit assembly (16.6%) translation (16.6%)" "cytoplasm (16.6%) small ribosomal subunit (16.6%) ribosome (0.1%)" "structural constituent of ribosome (16.6%) rRNA binding (16.6%)" "IPR002222 (25%) IPR005732 (25%) IPR023575 (25%)" "Small ribosomal subunit protein uS19 (25%) Small ribosomal subunit protein uS19, bacteria (25%) Small ribosomal subunit protein uS19, superfamily (25%)" ATQITDISGLTHGIGWCAPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides LILRPSEISNSPEVVRR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" AYEAIVKGDPMPEPGIPESLNVLLHELR KFGEGIFGADKVLSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (19.9%) GO:0042274 (19.9%)" "GO:0015935 (19.9%) GO:0005840 (0.3%)" "GO:0019843 (20.1%) GO:0003735 (19.9%)" "translation (19.9%) ribosomal small subunit biogenesis (19.9%)" "small ribosomal subunit (19.9%) ribosome (0.3%)" "rRNA binding (20.1%) structural constituent of ribosome (19.9%)" "IPR001912 (16.8%) IPR002942 (16.6%) IPR005709 (16.6%)" "Small ribosomal subunit protein uS4, N-terminal (16.8%) RNA-binding S4 domain (16.6%) Small ribosomal subunit protein uS4, bacteria (16.6%)" NVPPCAIVVGNPAR Escherichia Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) "GO:0016747 (85.7%) GO:0008870 (14.3%)" "acyltransferase activity, transferring groups other than amino-acyl groups (85.7%) galactoside O-acetyltransferase activity (14.3%)" "IPR001451 (25%) IPR011004 (25%) IPR018357 (25%)" "Hexapeptide repeat (25%) Trimeric LpxA-like superfamily (25%) Hexapeptide transferase, conserved site (25%)" MAGGVAVLYVGAPSEVEMKEK Pseudomonadati Bacteria Pseudomonadati 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" YNLPDYVDKNTGFISYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" LVSYAQGFAVLQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0019521 (24.9%) GO:0006098 (24.7%) GO:0009051 (0.2%)" GO:0005829 (0.2%) "GO:0004616 (24.9%) GO:0050661 (24.5%) GO:0016491 (0.4%)" "D-gluconate metabolic process (24.9%) pentose-phosphate shunt (24.7%) pentose-phosphate shunt, oxidative branch (0.2%)" cytosol (0.2%) "phosphogluconate dehydrogenase (decarboxylating) activity (24.9%) NADP binding (24.5%) oxidoreductase activity (0.4%)" "IPR006114 (12.6%) IPR006183 (12.6%) IPR006184 (12.6%)" "6-phosphogluconate dehydrogenase, C-terminal (12.6%) 6-phosphogluconate dehydrogenase (12.6%) 6-phosphogluconate-binding site (12.6%)" MQTIDNFNFAGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" IAVDGIKKEIEGAGFELALLEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (43.9%) GO:0016616 (41.5%) GO:0016787 (12.2%)" "NAD binding (43.9%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (41.5%) hydrolase activity (12.2%)" "IPR006139 (33.3%) IPR006140 (33.3%) IPR036291 (33.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" GYHTGNIMNAFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.8%) GO:0005829 (16.8%) "GO:0000049 (16.8%) GO:0004818 (16.8%) GO:0005524 (16.8%)" glutamyl-tRNA aminoacylation (16.8%) cytosol (16.8%) "tRNA binding (16.8%) glutamate-tRNA ligase activity (16.8%) ATP binding (16.8%)" "IPR008925 (10%) IPR020751 (10%) IPR045462 (10%)" "Aminoacyl-tRNA synthetase, class I, anticodon-binding superfamily (10%) Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 (10%) Aminoacyl-tRNA synthetase, class I, anticodon-binding (10%)" AAADELGLPLFQYIGGVNAK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" QGNIGVTSENIFPIIKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005524 (24.6%) GO:0016887 (24.6%) GO:0051082 (24.6%)" "ATP binding (24.6%) ATP hydrolysis activity (24.6%) unfolded protein binding (24.6%)" "IPR001404 (15.4%) IPR019805 (15.4%) IPR020568 (15.4%)" "Heat shock protein Hsp90 family (15.4%) Heat shock protein Hsp90, conserved site (15.4%) Ribosomal protein uS5 domain 2-type superfamily (15.4%)" WCYKPFEDLIQPAR root 3.1.3.26 (100%) 4-phytase (100%) "GO:0042938 (1.6%) GO:0015031 (0.1%) GO:0015886 (0%)" "GO:0030288 (25.2%) GO:0043190 (24%) GO:0016020 (0%)" "GO:1904680 (25.2%) GO:0071916 (23.7%) GO:0008707 (0.1%)" "dipeptide transport (1.6%) protein transport (0.1%) heme transport (0%)" "outer membrane-bounded periplasmic space (25.2%) ATP-binding cassette (ABC) transporter complex (24%) membrane (0%)" "peptide transmembrane transporter activity (25.2%) dipeptide transmembrane transporter activity (23.7%) inositol hexakisphosphate 4-phosphatase activity (0.1%)" "IPR039424 (21.4%) IPR000914 (21.1%) IPR030678 (20.4%)" "Solute-binding protein family 5 (21.4%) Solute-binding protein family 5 domain (21.1%) Peptide/nickel binding protein, MppA-type (20.4%)" NQLNVIVLNFVDMLSHAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0000160 (100%) phosphorelay signal transduction system (100%) "IPR001789 (20%) IPR011006 (20%) IPR013973 (20%)" "Signal transduction response regulator, receiver domain (20%) CheY-like superfamily (20%) Unknown (20%)" MILPVFLYGQPVLRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.5.1.88 (100%) peptide deformylase (100%) "GO:0006412 (25%) GO:0043686 (25%)" "GO:0042586 (25%) GO:0046872 (25%)" "translation (25%) obsolete co-translational protein modification (25%)" "peptide deformylase activity (25%) metal ion binding (25%)" "IPR023635 (50%) IPR036821 (50%)" "Peptide deformylase (50%) Peptide deformylase superfamily (50%)" GTVIGQLTETLKEYPNFYLTDIEALDAEKTSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" QFIESLGYPCK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (24.9%) GO:0005829 (24.9%) "GO:0003937 (24.9%) GO:0004643 (24.9%) GO:0016740 (0.4%)" 'de novo' IMP biosynthetic process (24.9%) cytosol (24.9%) "IMP cyclohydrolase activity (24.9%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (24.9%) transferase activity (0.4%)" "IPR002695 (20.5%) IPR011607 (20.5%) IPR036914 (20.5%)" "Bifunctional purine biosynthesis protein PurH-like (20.5%) Methylglyoxal synthase-like domain (20.5%) Methylglyoxal synthase-like domain superfamily (20.5%)" ETQTTENLNVLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.4.99.5 (100%) chorismate mutase (100%) GO:0046417 (47.2%) "GO:0004106 (47.2%) GO:0003849 (5.6%)" chorismate metabolic process (47.2%) "chorismate mutase activity (47.2%) 3-deoxy-7-phosphoheptulonate synthase activity (5.6%)" "IPR002701 (16.7%) IPR006218 (16.7%) IPR013785 (16.7%)" "Chorismate mutase II, prokaryotic-type (16.7%) DAHP synthetase I/KDSA (16.7%) Aldolase-type TIM barrel (16.7%)" AVIDPLTGPMPYQGR Morganellaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Morganellaceae 6.2.1.5 (100%) succinate--CoA ligase (ADP-forming) (100%) "GO:0006099 (13.6%) GO:0006104 (13.6%)" "GO:0005829 (13.6%) GO:0042709 (13.6%)" "GO:0000287 (13.6%) GO:0004775 (13.6%) GO:0005524 (13.6%)" "tricarboxylic acid cycle (13.6%) succinyl-CoA metabolic process (13.6%)" "cytosol (13.6%) succinate-CoA ligase complex (13.6%)" "magnesium ion binding (13.6%) succinate-CoA ligase (ADP-forming) activity (13.6%) ATP binding (13.6%)" "IPR005809 (14.3%) IPR005811 (14.3%) IPR011761 (14.3%)" "Succinate--CoA ligase-like, beta subunit (14.3%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.3%) ATP-grasp fold (14.3%)" AYMPWKGYNYEDAIVLNER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.7%) GO:0006508 (0.7%)" GO:0000428 (19.8%) "GO:0003677 (19.7%) GO:0003899 (19.7%) GO:0032549 (19.7%)" "DNA-templated transcription (19.7%) proteolysis (0.7%)" DNA-directed RNA polymerase complex (19.8%) "DNA binding (19.7%) DNA-directed RNA polymerase activity (19.7%) ribonucleoside binding (19.7%)" "IPR007120 (7.9%) IPR015712 (7.9%) IPR010243 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) DNA-directed RNA polymerase, subunit 2 (7.9%) DNA-directed RNA polymerase beta subunit, bacterial-type (7.9%)" ISEIEADLEKLTRK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales IPR020911 (100%) Uncharacterised protein family UPF0325 (100%) EGSSLLGSDAGELAGAGK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "1.17.1.8 (99.6%) 1.3.1.26 (0.4%)" "4-hydroxy-tetrahydrodipicolinate reductase (99.6%) Transferred entry: 1.17.1.8 (0.4%)" "GO:0009089 (14.6%) GO:0019877 (14.4%) GO:0008652 (0%)" "GO:0005829 (14.3%) GO:0005737 (0.1%)" "GO:0008839 (14.6%) GO:0016726 (14%) GO:0050661 (14%)" "lysine biosynthetic process via diaminopimelate (14.6%) diaminopimelate biosynthetic process (14.4%) amino acid biosynthetic process (0%)" "cytosol (14.3%) cytoplasm (0.1%)" "4-hydroxy-tetrahydrodipicolinate reductase (14.6%) oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor (14%) NADP binding (14%)" "IPR000846 (20.2%) IPR036291 (20.2%) IPR023940 (19.9%)" "Dihydrodipicolinate reductase, N-terminal (20.2%) NAD(P)-binding domain superfamily (20.2%) Dihydrodipicolinate reductase (19.9%)" MNKTQLIDVIAEKAELSK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0030261 (11.6%) GO:0006270 (10.5%) GO:0006351 (10.5%)" "GO:0005829 (11.6%) GO:1990103 (10.5%) GO:1990178 (10.5%)" "GO:0003677 (12.1%) GO:0030527 (11.6%) GO:0042802 (10.5%)" "chromosome condensation (11.6%) DNA replication initiation (10.5%) DNA-templated transcription (10.5%)" "cytosol (11.6%) DnaA-HU complex (10.5%) HU-DNA complex (10.5%)" "DNA binding (12.1%) structural constituent of chromatin (11.6%) identical protein binding (10.5%)" "IPR000119 (33.6%) IPR010992 (33.6%) IPR020816 (32.8%)" "Histone-like DNA-binding protein (33.6%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.6%) Histone-like DNA-binding protein, conserved site (32.8%)" LTGRPICVTAAADILR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota GO:0005829 (47.5%) "GO:0005524 (47.8%) GO:0016787 (4.8%)" cytosol (47.5%) "ATP binding (47.8%) hydrolase activity (4.8%)" "IPR051451 (33.9%) IPR003714 (33.3%) IPR027417 (32.9%)" "PhoH2-like (33.9%) PhoH-like protein (33.3%) P-loop containing nucleoside triphosphate hydrolase (32.9%)" MATIDKLTNDGTYSNLSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.2%) "GO:0022627 (32.8%) GO:0005840 (0.8%)" GO:0003735 (33.2%) translation (33.2%) "cytosolic small ribosomal subunit (32.8%) ribosome (0.8%)" structural constituent of ribosome (33.2%) "IPR001865 (25.2%) IPR023591 (25.2%) IPR005706 (24.9%)" "Small ribosomal subunit protein uS2 (25.2%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.2%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (24.9%)" LAAQKLPVTTK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20.3%) GO:0022625 (20.3%) "GO:0003735 (20.3%) GO:0019843 (20.3%) GO:0000049 (18.9%)" translation (20.3%) cytosolic large ribosomal subunit (20.3%) "structural constituent of ribosome (20.3%) rRNA binding (20.3%) tRNA binding (18.9%)" "IPR000114 (20.3%) IPR016180 (20.3%) IPR036920 (20.3%)" "Large ribosomal subunit protein uL16, bacteria (20.3%) Large ribosomal subunit protein uL16 domain (20.3%) Large ribosomal subunit protein uL16 superfamily (20.3%)" TNTTCIFINQLR Bacteria Bacteria "GO:0006281 (13.2%) GO:0006310 (13.2%) GO:0009432 (10.6%)" GO:0005829 (13.2%) "GO:0003697 (13.2%) GO:0005524 (13.2%) GO:0140664 (13.2%)" "DNA repair (13.2%) DNA recombination (13.2%) SOS response (10.6%)" cytosol (13.2%) "single-stranded DNA binding (13.2%) ATP binding (13.2%) ATP-dependent DNA damage sensor activity (13.2%)" "IPR013765 (11.7%) IPR020584 (11.7%) IPR020587 (11.7%)" "DNA recombination and repair protein RecA (11.7%) DNA recombination/repair protein RecA, conserved site (11.7%) DNA recombination and repair protein RecA, monomer-monomer interface (11.7%)" DIPGDTSFLEMMDILNEQLINEGKEPIVFDHDCR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.3.5.1 (50%) 1.3.99.1 (50%)" "succinate dehydrogenase (50%) Deleted entry (50%)" "GO:0009060 (24.1%) GO:0022904 (24.1%)" "GO:0009055 (24.1%) GO:0051537 (24.1%) GO:0008177 (1.7%)" "aerobic respiration (24.1%) respiratory electron transport chain (24.1%)" "electron transfer activity (24.1%) 2 iron, 2 sulfur cluster binding (24.1%) succinate dehydrogenase (quinone) activity (1.7%)" "IPR006058 (14.3%) IPR009051 (14.3%) IPR012675 (14.3%)" "2Fe-2S ferredoxin, iron-sulphur binding site (14.3%) Alpha-helical ferredoxin (14.3%) Beta-grasp domain superfamily (14.3%)" VLAGKPYFSVASGGGTGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR025964 (100%) GGGtGRT protein (100%) LGATDLLEAGHQLGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004825 (16.7%) GO:0005524 (16.7%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) methionine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR001412 (8.3%) IPR002547 (8.3%) IPR004495 (8.3%)" "Aminoacyl-tRNA synthetase, class I, conserved site (8.3%) tRNA-binding domain (8.3%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.3%)" FQDFIKGEVR Bacteria Bacteria "1.2.7.1 (68%) 1.2.7.- (28%) 1.2.1.51 (4%)" "pyruvate synthase (68%) With an iron-sulfur protein as acceptor (28%) pyruvate dehydrogenase (NADP(+)) (4%)" "GO:0006979 (15.3%) GO:0022900 (14.3%) GO:0044281 (11.6%)" "GO:0030976 (14.5%) GO:0005506 (14.3%) GO:0051539 (14.3%)" "response to oxidative stress (15.3%) electron transport chain (14.3%) small molecule metabolic process (11.6%)" "thiamine pyrophosphate binding (14.5%) iron ion binding (14.3%) 4 iron, 4 sulfur cluster binding (14.3%)" "IPR029061 (8.2%) IPR050722 (8.1%) IPR011766 (7.7%)" "Thiamin diphosphate-binding fold (8.2%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (8.1%) Thiamine pyrophosphate enzyme, TPP-binding (7.7%)" IINVLGSDNKLAE Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24%) GO:0030388 (24%) GO:0005975 (1.4%)" "GO:0008270 (25.3%) GO:0004332 (24%) GO:0016832 (1.4%)" "glycolytic process (24%) fructose 1,6-bisphosphate metabolic process (24%) carbohydrate metabolic process (1.4%)" "zinc ion binding (25.3%) fructose-bisphosphate aldolase activity (24%) aldehyde-lyase activity (1.4%)" "IPR000771 (25.3%) IPR013785 (25.3%) IPR050246 (25.3%)" "Fructose-bisphosphate aldolase, class-II (25.3%) Aldolase-type TIM barrel (25.3%) Class II Fructose-bisphosphate Aldolase (25.3%)" QEIVTDPLEQEVNKNVFMGK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "7.1.1.- (98.7%) 1.6.5.11 (0.5%) 1.6.5.3 (0.5%)" "Hydron translocation or charge separation linked to oxidoreductase reactions (98.7%) Transferred entry: 1.6.5.9 (0.5%) Transferred entry: 7.1.1.2 (0.5%)" "GO:0009060 (11.1%) GO:0015990 (11.1%) GO:0022904 (0%)" "GO:0045271 (11.1%) GO:0005886 (11%) GO:0016020 (0%)" "GO:0008137 (11.1%) GO:0048038 (11.1%) GO:0051539 (11.1%)" "aerobic respiration (11.1%) electron transport coupled proton transport (11.1%) respiratory electron transport chain (0%)" "respiratory chain complex I (11.1%) plasma membrane (11%) membrane (0%)" "NADH dehydrogenase (ubiquinone) activity (11.1%) quinone binding (11.1%) 4 iron, 4 sulfur cluster binding (11.1%)" "IPR006137 (50%) IPR006138 (50%)" "NADH:ubiquinone oxidoreductase-like, 20kDa subunit (50%) NADH-ubiquinone oxidoreductase, 20 Kd subunit (50%)" AHGCEYNAAAVGEVNVVAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "5.4.2.10 (75%) 5.4.2.2 (25%)" "phosphoglucosamine mutase (75%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (25%)" "GO:0005975 (14%) GO:0006048 (14%) GO:0009252 (14%)" GO:0005829 (14%) "GO:0000287 (14%) GO:0004615 (14%) GO:0008966 (14%)" "carbohydrate metabolic process (14%) UDP-N-acetylglucosamine biosynthetic process (14%) peptidoglycan biosynthetic process (14%)" cytosol (14%) "magnesium ion binding (14%) phosphomannomutase activity (14%) phosphoglucosamine mutase activity (14%)" "IPR005841 (10.2%) IPR005844 (10.2%) IPR005845 (10.2%)" "Alpha-D-phosphohexomutase superfamily (10.2%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10.2%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (10.2%)" SFIRPSPSAGSLGGVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.6.5.- (57.7%) 2.7.-.- (23.6%) 3.6.-.- (18.7%)" "Acting on GTP; involved in cellular and subcellular movement (57.7%) Transferring phosphorus-containing groups (23.6%) Acting on acid anhydrides (18.7%)" GO:0005737 (30.6%) "GO:0003924 (30.8%) GO:0005525 (30.8%) GO:0016740 (4.5%)" cytoplasm (30.6%) "GTPase activity (30.8%) GTP binding (30.8%) transferase activity (4.5%)" "IPR005129 (50.1%) IPR027417 (49.9%)" "SIMIBI class G3E GTPase, ArgK/MeaB (50.1%) P-loop containing nucleoside triphosphate hydrolase (49.9%)" KYVEPLITK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006412 (32.7%) GO:0006281 (0.2%) GO:0006334 (0.2%)" "GO:0022625 (32.7%) GO:0000786 (0.2%)" "GO:0003735 (32.7%) GO:0000166 (0.4%) GO:0003677 (0.4%)" "translation (32.7%) DNA repair (0.2%) nucleosome assembly (0.2%)" "cytosolic large ribosomal subunit (32.7%) nucleosome (0.2%)" "structural constituent of ribosome (32.7%) nucleotide binding (0.4%) DNA binding (0.4%)" "IPR000456 (34.9%) IPR036373 (34.9%) IPR047859 (29%)" "Large ribosomal subunit protein bL17 (34.9%) Large ribosomal subunit protein bL17 superfamily (34.9%) Large ribosomal subunit protein bL17, conserved site (29%)" KLQEFASYNDNLEEVFENREQIEISR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (25.1%) GO:0000428 (24.7%) "GO:0003677 (25.1%) GO:0003899 (25.1%)" DNA-templated transcription (25.1%) DNA-directed RNA polymerase complex (24.7%) "DNA binding (25.1%) DNA-directed RNA polymerase activity (25.1%)" "IPR006110 (63.5%) IPR036161 (36.5%)" "RNA polymerase, subunit omega/Rpo6/RPB6 (63.5%) RPB6/omega subunit-like superfamily (36.5%)" ETLADTLQSAWNWQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR005886 (33.3%) IPR036291 (33.3%) IPR001509 (28.6%)" "UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD-dependent epimerase/dehydratase (28.6%)" AIAELNGAEYEGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0003723 (100%) RNA binding (100%) "IPR000504 (22.1%) IPR012677 (22.1%) IPR035979 (22.1%)" "RNA recognition motif domain (22.1%) Nucleotide-binding alpha-beta plait domain superfamily (22.1%) RNA-binding domain superfamily (22.1%)" ECELLSLLCAHANEILER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" ELAGVAGCAVAIAPPEMYIDMAKR root 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.4%) GO:0006096 (16.4%) GO:0019563 (16.4%)" "GO:0005829 (16.4%) GO:0016020 (0.2%)" "GO:0004807 (16.8%) GO:0016853 (0.7%) GO:0042802 (0.2%)" "gluconeogenesis (16.4%) glycolytic process (16.4%) glycerol catabolic process (16.4%)" "cytosol (16.4%) membrane (0.2%)" "triose-phosphate isomerase activity (16.8%) isomerase activity (0.7%) identical protein binding (0.2%)" "IPR000652 (20.9%) IPR013785 (20.9%) IPR035990 (20.9%)" "Triosephosphate isomerase (20.9%) Aldolase-type TIM barrel (20.9%) Triosephosphate isomerase superfamily (20.9%)" SICEDDKLDLALDLIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (32.1%) IPR015824 (32.1%) IPR036043 (32.1%)" "Phosphoglycerate kinase (32.1%) Phosphoglycerate kinase, N-terminal (32.1%) Phosphoglycerate kinase superfamily (32.1%)" EENTKPHYASYDVRPVTSEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.13.11.24 (100%) quercetin 2,3-dioxygenase (100%) "GO:0046872 (78.6%) GO:0008127 (21.4%)" "metal ion binding (78.6%) quercetin 2,3-dioxygenase activity (21.4%)" "IPR003829 (20%) IPR011051 (20%) IPR012093 (20%)" "Pirin, N-terminal domain (20%) RmlC-like cupin domain superfamily (20%) Pirin (20%)" KADELMVEIMK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis DGFVLGDGAGMLVLEEYEHAK root "2.3.1.179 (99.8%) 2.3.1.41 (0.2%)" "beta-ketoacyl-[acyl-carrier-protein] synthase II (99.8%) beta-ketoacyl-[acyl-carrier-protein] synthase I (0.2%)" "GO:0006633 (32.8%) GO:0006233 (0.1%) GO:0006260 (0.1%)" "GO:0005829 (32.7%) GO:0005886 (0.1%) GO:0009360 (0.1%)" "GO:0004315 (32.8%) GO:0016746 (0.1%) GO:0003677 (0.1%)" "fatty acid biosynthetic process (32.8%) dTDP biosynthetic process (0.1%) DNA replication (0.1%)" "cytosol (32.7%) plasma membrane (0.1%) DNA polymerase III complex (0.1%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (32.8%) acyltransferase activity (0.1%) DNA binding (0.1%)" "IPR000794 (14.3%) IPR014030 (14.3%) IPR016039 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Thiolase-like (14.3%)" TMKEDILEGFKIGADDYLTKPFSMEELLLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" GKEVLNFCANNYLGLSNHPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (14%) GO:0030148 (14%) GO:0006567 (0.1%)" "GO:0005829 (14.2%) GO:0016020 (14%)" "GO:0008890 (14.2%) GO:0030170 (14.2%) GO:0004758 (8.1%)" "L-threonine catabolic process to glycine (14%) sphingolipid biosynthetic process (14%) L-threonine catabolic process (0.1%)" "cytosol (14.2%) membrane (14%)" "glycine C-acetyltransferase activity (14.2%) pyridoxal phosphate binding (14.2%) serine C-palmitoyltransferase activity (8.1%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" IAHELLELGVPLIPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.30 (100%) serine O-acetyltransferase (100%) GO:0008652 (49.2%) GO:0005829 (0.8%) "GO:0009001 (40.7%) GO:0016746 (8.5%) GO:0016740 (0.8%)" amino acid biosynthetic process (49.2%) cytosol (0.8%) "serine O-acetyltransferase activity (40.7%) acyltransferase activity (8.5%) transferase activity (0.8%)" "IPR011004 (30.8%) IPR042122 (30.8%) IPR045304 (30.3%)" "Trimeric LpxA-like superfamily (30.8%) Serine acetyltransferase, N-terminal domain superfamily (30.8%) Serine acetyltransferase, LbH domain (30.3%)" VAPYMQPLFDNLNVIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR003714 (24.8%) IPR051451 (24.8%) IPR002716 (24.7%)" "PhoH-like protein (24.8%) PhoH2-like (24.8%) PIN domain (24.7%)" KGAEGLNIAFIHPK Pseudomonadati Bacteria Pseudomonadati "5.1.99.1 (98.1%) 4.4.1.5 (0.9%) 5.1.99.- (0.9%)" "methylmalonyl-CoA epimerase (98.1%) lactoylglutathione lyase (0.9%) Acting on other compounds (0.9%)" GO:0046491 (46.3%) "GO:0004493 (46.3%) GO:0016829 (2.9%) GO:0004462 (1.6%)" L-methylmalonyl-CoA metabolic process (46.3%) "methylmalonyl-CoA epimerase activity (46.3%) lyase activity (2.9%) lactoylglutathione lyase activity (1.6%)" "IPR029068 (24.9%) IPR037523 (24.9%) IPR051785 (24.9%)" "Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (24.9%) Vicinal oxygen chelate (VOC), core domain (24.9%) Methylmalonyl-CoA/ethylmalonyl-CoA epimerase (24.9%)" LLLVLPEANK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.2%) "GO:0005840 (20.2%) GO:1990904 (20.2%)" "GO:0003735 (20.2%) GO:0019843 (16.7%) GO:0003723 (2.4%)" translation (20.2%) "ribosome (20.2%) ribonucleoprotein complex (20.2%)" "structural constituent of ribosome (20.2%) rRNA binding (16.7%) RNA binding (2.4%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" ALEEAGAEVEVK Pseudomonadati Bacteria Pseudomonadati "GO:0006412 (24.6%) GO:0002181 (0.2%)" "GO:0022625 (24.6%) GO:0005840 (0.7%) GO:0005737 (0.2%)" "GO:0003729 (24.6%) GO:0003735 (24.6%) GO:0042803 (0.2%)" "translation (24.6%) cytoplasmic translation (0.2%)" "cytosolic large ribosomal subunit (24.6%) ribosome (0.7%) cytoplasm (0.2%)" "mRNA binding (24.6%) structural constituent of ribosome (24.6%) protein homodimerization activity (0.2%)" "IPR000206 (20.2%) IPR013823 (20.2%) IPR014719 (20.2%)" "Large ribosomal subunit protein bL12 (20.2%) Large ribosomal subunit protein bL12, C-terminal (20.2%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20.2%)" KATCYPGFEPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006508 (7.1%) GO:0005737 (85.7%) GO:0008233 (7.1%) proteolysis (7.1%) cytoplasm (85.7%) peptidase activity (7.1%) "IPR002818 (25%) IPR006287 (25%) IPR029062 (25%)" "DJ-1/PfpI (25%) Protein/nucleic acid deglycase DJ-1 (25%) Class I glutamine amidotransferase-like (25%)" KGGIAAFIDAEHAFDR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006281 (12.7%) GO:0006310 (12.7%) GO:0009432 (12.1%)" GO:0005829 (12.7%) "GO:0003697 (12.7%) GO:0005524 (12.7%) GO:0140664 (12.7%)" "DNA repair (12.7%) DNA recombination (12.7%) SOS response (12.1%)" cytosol (12.7%) "single-stranded DNA binding (12.7%) ATP binding (12.7%) ATP-dependent DNA damage sensor activity (12.7%)" "IPR013765 (11.5%) IPR020587 (11.5%) IPR020588 (11.5%)" "DNA recombination and repair protein RecA (11.5%) DNA recombination and repair protein RecA, monomer-monomer interface (11.5%) DNA recombination and repair protein RecA-like, ATP-binding domain (11.5%)" FTFPENEHSYIVVDALDKGSYIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.6%) GO:0006516 (19.6%)" GO:0005829 (19.6%) "GO:0000224 (19.6%) GO:0030246 (19.6%) GO:0016798 (2%)" "carbohydrate metabolic process (19.6%) glycoprotein catabolic process (19.6%)" cytosol (19.6%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.6%) carbohydrate binding (19.6%) hydrolase activity, acting on glycosyl bonds (2%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" IGKLPISIPAGVTVTLKDDVVTVKGPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0002181 (24.8%) "GO:0022625 (24.8%) GO:0005840 (0.7%)" "GO:0003735 (24.8%) GO:0019843 (24.8%)" cytoplasmic translation (24.8%) "cytosolic large ribosomal subunit (24.8%) ribosome (0.7%)" "structural constituent of ribosome (24.8%) rRNA binding (24.8%)" "IPR000702 (20%) IPR002358 (20%) IPR019906 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, conserved site (20%) Large ribosomal subunit protein uL6, bacteria (20%)" AIAEMAGTTYGQDNQKDIAMR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR002318 (9.3%) IPR018164 (9.3%) IPR018165 (9.3%)" "Alanine-tRNA ligase, class IIc (9.3%) Alanyl-tRNA synthetase, class IIc, N-terminal (9.3%) Alanyl-tRNA synthetase, class IIc, core domain (9.3%)" AIQKVEEIGAPYGIGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.4.5 (100%) argininosuccinate synthase (100%) "GO:0000050 (16.7%) GO:0000053 (16.7%) GO:0006526 (16.7%)" GO:0005737 (16.7%) "GO:0004055 (16.7%) GO:0005524 (16.7%)" "urea cycle (16.7%) argininosuccinate metabolic process (16.7%) L-arginine biosynthetic process (16.7%)" cytoplasm (16.7%) "argininosuccinate synthase activity (16.7%) ATP binding (16.7%)" "IPR001518 (15%) IPR024074 (15%) IPR048268 (15%)" "Argininosuccinate synthase (15%) Argininosuccinate synthetase, catalytic/multimerisation domain body (15%) Arginosuccinate synthase C-terminal domain (15%)" EGIHDVTFVLCNTDNQALNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0000917 (14.3%) GO:0043093 (14.3%) GO:0051258 (14.3%)" "GO:0005737 (14.3%) GO:0032153 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%)" "division septum assembly (14.3%) FtsZ-dependent cytokinesis (14.3%) protein polymerization (14.3%)" "cytoplasm (14.3%) cell division site (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" EITQGLGAGNKPER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0000917 (14.6%) GO:0043093 (13.4%) GO:0051258 (13.4%)" "GO:0005737 (14.6%) GO:0032153 (14.6%)" "GO:0003924 (14.6%) GO:0005525 (14.6%)" "division septum assembly (14.6%) FtsZ-dependent cytokinesis (13.4%) protein polymerization (13.4%)" "cytoplasm (14.6%) cell division site (14.6%)" "GTPase activity (14.6%) GTP binding (14.6%)" "IPR000158 (11.1%) IPR003008 (11.1%) IPR008280 (11.1%)" "Cell division protein FtsZ (11.1%) Tubulin/FtsZ, GTPase domain (11.1%) Tubulin/FtsZ, C-terminal (11.1%)" QQYIGGGEESYGFLAEDFVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.2 (63.2%) 5.4.2.- (36.8%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (63.2%) Phosphotransferases (phosphomutases) (36.8%)" "GO:0005975 (24.3%) GO:0006166 (24.3%)" "GO:0000287 (24.3%) GO:0008973 (24.3%) GO:0004614 (3%)" "carbohydrate metabolic process (24.3%) purine ribonucleoside salvage (24.3%)" "magnesium ion binding (24.3%) phosphopentomutase activity (24.3%) phosphoglucomutase activity (3%)" "IPR005844 (12.9%) IPR005845 (12.9%) IPR005846 (12.9%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.9%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.9%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (12.9%)" GKDQVLVEDEDGFEVPALIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR002625 (25%) IPR018598 (25%) IPR036063 (25%)" "Smr domain (25%) Domain of unknown function DUF2027 (25%) Smr domain superfamily (25%)" AGLISVHLYRPFSAK ELLSFLPSNNMEDAPLVPCNDDIHR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "6.4.1.3 (66.7%) 6.4.1.2 (33.3%)" "propionyl-CoA carboxylase (66.7%) acetyl-CoA carboxylase (33.3%)" GO:0015977 (19.6%) GO:0009317 (19.6%) "GO:0004658 (30.7%) GO:0003989 (20.2%) GO:0016740 (9.8%)" carbon fixation (19.6%) acetyl-CoA carboxylase complex (19.6%) "propionyl-CoA carboxylase activity (30.7%) acetyl-CoA carboxylase activity (20.2%) transferase activity (9.8%)" "IPR029045 (20.2%) IPR034733 (20.2%) IPR051047 (20.2%)" "ClpP/crotonase-like domain superfamily (20.2%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.2%) Acyl-CoA Carboxylase Beta Subunit (20.2%)" VTDKDIQINIFEVKRPELDAVIVANNIAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0022627 (20%) GO:0005840 (0.3%)" "GO:0003735 (20%) GO:0019843 (20%) GO:0003729 (19.7%)" translation (20%) "cytosolic small ribosomal subunit (20%) ribosome (0.3%)" "structural constituent of ribosome (20%) rRNA binding (20%) mRNA binding (19.7%)" "IPR001351 (11.2%) IPR004044 (11.2%) IPR004087 (11.2%)" "Small ribosomal subunit protein uS3, C-terminal (11.2%) K Homology domain, type 2 (11.2%) K Homology domain (11.2%)" VWGLESFGFSAPYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.2.1.1 (98.5%) 2.2.1.- (1.5%)" "transketolase (98.5%) Transketolases and transaldolases (1.5%)" GO:0006098 (25%) "GO:0005829 (25%) GO:0016020 (0.2%)" "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) "cytosol (25%) membrane (0.2%)" "transketolase activity (25%) metal ion binding (25%)" "IPR005475 (12.7%) IPR009014 (12.7%) IPR029061 (12.7%)" "Transketolase-like, pyrimidine-binding domain (12.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.7%) Thiamin diphosphate-binding fold (12.7%)" SVYDWLDSHHSFSFDEYYNPER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.13.11.24 (100%) quercetin 2,3-dioxygenase (100%) "GO:0046872 (89.5%) GO:0008127 (10.5%)" "metal ion binding (89.5%) quercetin 2,3-dioxygenase activity (10.5%)" "IPR003829 (20%) IPR011051 (20%) IPR012093 (20%)" "Pirin, N-terminal domain (20%) RmlC-like cupin domain superfamily (20%) Pirin (20%)" AIAAFNQAAQMGNEAAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" ATYGEEPAGVWAAPGR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10.1%) IPR006203 (10.1%) IPR006204 (10.1%)" "Galactokinase (10.1%) GHMP kinase, ATP-binding, conserved site (10.1%) GHMP kinase N-terminal domain (10.1%)" SKSPALDSCPQRR root "GO:0006412 (20.1%) GO:0032790 (0%)" "GO:0015935 (20.1%) GO:0005840 (0.1%) GO:1990904 (0%)" "GO:0003735 (20.1%) GO:0019843 (20.1%) GO:0000049 (19.4%)" "translation (20.1%) ribosome disassembly (0%)" "small ribosomal subunit (20.1%) ribosome (0.1%) ribonucleoprotein complex (0%)" "structural constituent of ribosome (20.1%) rRNA binding (20.1%) tRNA binding (19.4%)" "IPR006032 (33.2%) IPR012340 (33.2%) IPR005679 (33.1%)" "Small ribosomal subunit protein uS12 (33.2%) Nucleic acid-binding, OB-fold (33.2%) Ribosomal protein uS12, bacteria (33.1%)" ETEHYEVSIIPHDNLDKEVLFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR032265 (100%) Protein of unknown function DUF4831 (100%) LFATQSVEALKSEVTNLITGDIASSNVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis SNVPALEACPQKR root "GO:0006412 (19.9%) GO:0046677 (0%) GO:0000028 (0%)" "GO:0015935 (19.8%) GO:0005840 (0.5%) GO:1990904 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.8%) GO:0000049 (19.6%)" "translation (19.9%) response to antibiotic (0%) ribosomal small subunit assembly (0%)" "small ribosomal subunit (19.8%) ribosome (0.5%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.8%) tRNA binding (19.6%)" "IPR012340 (33.4%) IPR006032 (33.4%) IPR005679 (33.2%)" "Nucleic acid-binding, OB-fold (33.4%) Small ribosomal subunit protein uS12 (33.4%) Ribosomal protein uS12, bacteria (33.2%)" TSDVSVVDLTVVLEK root "1.2.1.- (94.9%) 1.2.1.12 (5.1%)" "With NAD(+) or NADP(+) as acceptor (94.9%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (5.1%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" "GO:0005737 (16.2%) GO:0005829 (0.5%)" "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (10.8%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" "cytoplasm (16.2%) cytosol (0.5%)" "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (10.8%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" GLSTAVGDEGGFAPSLDGTEDALDSILAAIK LTDSEVFGFAQINSEHCR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.1%) GO:0006164 (1%)" GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (19.4%)" "'de novo' IMP biosynthetic process (19.1%) purine nucleotide biosynthetic process (1%)" cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (19.4%)" "IPR041609 (11.3%) IPR036604 (11.3%) IPR036921 (11.3%)" "Phosphoribosylformylglycinamidine synthase, linker domain (11.3%) Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily (11.3%) PurM-like, N-terminal domain superfamily (11.3%)" NLTQNEGYSAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (34.8%) IPR012944 (34.8%) IPR033985 (30.4%)" "Tetratricopeptide-like helical domain superfamily (34.8%) RagB/SusD domain (34.8%) SusD-like, N-terminal (30.4%)" TSLPLDNLCIATPDVGGTKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" EAVNQVIALLDSGALR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.3.1.117 (100%) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (100%) "GO:0009089 (19.7%) GO:0019877 (19.7%) GO:0009085 (0.1%)" "GO:0005737 (19.1%) GO:0005829 (0.1%)" "GO:0008666 (21%) GO:0016779 (19.6%) GO:0016746 (0.5%)" "lysine biosynthetic process via diaminopimelate (19.7%) diaminopimelate biosynthetic process (19.7%) lysine biosynthetic process (0.1%)" "cytoplasm (19.1%) cytosol (0.1%)" "2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity (21%) nucleotidyltransferase activity (19.6%) acyltransferase activity (0.5%)" "IPR011004 (17.3%) IPR023180 (17.3%) IPR037133 (17.3%)" "Trimeric LpxA-like superfamily (17.3%) Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 (17.3%) Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily (17.3%)" ILEPIYDVEVFVPSDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.1%) "GO:0003746 (25.3%) GO:0005525 (25.1%) GO:0003924 (24.6%)" ribosome disassembly (25.1%) "translation elongation factor activity (25.3%) GTP binding (25.1%) GTPase activity (24.6%)" "IPR000640 (7.6%) IPR005517 (7.6%) IPR014721 (7.6%)" "Elongation factor EFG, domain V-like (7.6%) Translation elongation factor EFG/EF2, domain IV (7.6%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (7.6%)" IDPAMIPYLNRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.-.-.- (100%) Hydrolases (100%) GO:0005829 (25%) "GO:0000287 (25%) GO:0016289 (25%) GO:0016791 (25%)" cytosol (25%) "magnesium ion binding (25%) acyl-CoA hydrolase activity (25%) phosphatase activity (25%)" "IPR000150 (14.3%) IPR003736 (14.3%) IPR006379 (14.3%)" "Cof family (14.3%) Phenylacetic acid degradation-related domain (14.3%) HAD-superfamily hydrolase, subfamily IIB (14.3%)" RIEEQVPSSPEIVHLIEFVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.3.1.129 (100%) acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (100%) "GO:0009245 (31.4%) GO:0008610 (2.9%)" GO:0016020 (31.4%) GO:0008780 (34.3%) "lipid A biosynthetic process (31.4%) lipid biosynthetic process (2.9%)" membrane (31.4%) acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity (34.3%) "IPR001451 (20%) IPR010137 (20%) IPR011004 (20%)" "Hexapeptide repeat (20%) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (20%) Trimeric LpxA-like superfamily (20%)" NEASENSVWWTSEEYKNDNKPCSEEAWADLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.3%) GO:0005829 (17.3%) "GO:0004612 (17.3%) GO:0005524 (17.3%) GO:0046872 (17.3%)" gluconeogenesis (17.3%) cytosol (17.3%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.3%) ATP binding (17.3%) metal ion binding (17.3%)" "IPR001272 (25.8%) IPR008210 (25.8%) IPR013035 (24.2%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.8%) Phosphoenolpyruvate carboxykinase, N-terminal (25.8%) Phosphoenolpyruvate carboxykinase, C-terminal (24.2%)" IEEALGEKAPYNGR root 4.2.1.11 (100%) phosphopyruvate hydratase (100%) "GO:0006096 (16.8%) GO:0006396 (0%) GO:0006401 (0%)" "GO:0005576 (16.7%) GO:0000015 (16.7%) GO:0009986 (15.9%)" "GO:0004634 (16.7%) GO:0000287 (16.7%) GO:0016829 (0.2%)" "glycolytic process (16.8%) RNA processing (0%) RNA catabolic process (0%)" "extracellular region (16.7%) phosphopyruvate hydratase complex (16.7%) cell surface (15.9%)" "phosphopyruvate hydratase activity (16.7%) magnesium ion binding (16.7%) lyase activity (0.2%)" "IPR020810 (17%) IPR036849 (17%) IPR000941 (16.9%)" "Enolase, C-terminal TIM barrel domain (17%) Enolase-like, C-terminal domain superfamily (17%) Enolase (16.9%)" TTLSTDPKR root 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.5%) "GO:0005829 (17.4%) GO:0005737 (0%)" "GO:0004612 (17.5%) GO:0005524 (17.5%) GO:0046872 (17.1%)" gluconeogenesis (17.5%) "cytosol (17.4%) cytoplasm (0%)" "phosphoenolpyruvate carboxykinase (ATP) activity (17.5%) ATP binding (17.5%) metal ion binding (17.1%)" "IPR001272 (25.1%) IPR013035 (25.1%) IPR015994 (24.9%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.1%) Phosphoenolpyruvate carboxykinase, C-terminal (25.1%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (24.9%)" KIQDEMTYPGQVK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.1.-.- (100%) Acting on ester bonds (100%) GO:0006402 (19.7%) "GO:0005886 (18.4%) GO:0016020 (1.4%)" "GO:0003723 (20.2%) GO:0016787 (20%) GO:0004521 (18.3%)" mRNA catabolic process (19.7%) "plasma membrane (18.4%) membrane (1.4%)" "RNA binding (20.2%) hydrolase activity (20%) RNA endonuclease activity (18.3%)" "IPR006674 (12.7%) IPR006675 (12.6%) IPR003607 (12.6%)" "HD domain (12.7%) HDIG domain (12.6%) HD/PDEase domain (12.6%)" YQEVPDAELPRTESLKDTIER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.4.2.11 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (100%) "GO:0006094 (33.3%) GO:0006096 (33.3%)" GO:0004619 (33.3%) "gluconeogenesis (33.3%) glycolytic process (33.3%)" phosphoglycerate mutase activity (33.3%) "IPR001345 (25%) IPR005952 (25%) IPR013078 (25%)" "Phosphoglycerate/bisphosphoglycerate mutase, active site (25%) Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%)" AIASQALSIFGDHQDVMSAR Clostridia Bacteria Bacillati Bacillota Clostridia "1.2.7.1 (80%) 1.2.7.- (20%)" "pyruvate synthase (80%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (16.7%) GO:0022900 (16.7%)" "GO:0005506 (16.7%) GO:0030976 (16.7%) GO:0051539 (16.7%)" "response to oxidative stress (16.7%) electron transport chain (16.7%)" "iron ion binding (16.7%) thiamine pyrophosphate binding (16.7%) 4 iron, 4 sulfur cluster binding (16.7%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" ISANGDEAIGK root 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (22.2%) "GO:0005737 (9.5%) GO:0005759 (1.3%) GO:0005739 (0.6%)" "GO:0005524 (22.2%) GO:0140662 (22.2%) GO:0016853 (12.7%)" protein refolding (22.2%) "cytoplasm (9.5%) mitochondrial matrix (1.3%) mitochondrion (0.6%)" "ATP binding (22.2%) ATP-dependent protein folding chaperone (22.2%) isomerase activity (12.7%)" "IPR001844 (18.2%) IPR002423 (18.2%) IPR027409 (18.2%)" "Chaperonin Cpn60/GroEL (18.2%) Chaperonin Cpn60/GroEL/TCP-1 family (18.2%) GroEL-like apical domain superfamily (18.2%)" LKDSVPCAVIEGDQQTVNDAAR root 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0051604 (19.8%) GO:0065003 (0.1%)" GO:1905360 (0.1%) "GO:0003924 (19.8%) GO:0005525 (19.8%) GO:0008270 (19.8%)" "protein maturation (19.8%) protein-containing complex assembly (0.1%)" GTPase complex (0.1%) "GTPase activity (19.8%) GTP binding (19.8%) zinc ion binding (19.8%)" "IPR004392 (33.3%) IPR027417 (33.3%) IPR003495 (33.1%)" "Hydrogenase maturation factor HypB (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%) CobW/HypB/UreG, nucleotide-binding domain (33.1%)" LSEETGNVYETVAIISKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (25%) GO:0000428 (25%) "GO:0003677 (25%) GO:0003899 (25%)" DNA-templated transcription (25%) DNA-directed RNA polymerase complex (25%) "DNA binding (25%) DNA-directed RNA polymerase activity (25%)" "IPR006110 (50%) IPR036161 (50%)" "RNA polymerase, subunit omega/Rpo6/RPB6 (50%) RPB6/omega subunit-like superfamily (50%)" EQGEEAANTALVEASK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.42 (100%) isocitrate dehydrogenase (NADP(+)) (100%) "GO:0006097 (20%) GO:0006099 (20%)" "GO:0000287 (20%) GO:0004450 (20%) GO:0051287 (20%)" "glyoxylate cycle (20%) tricarboxylic acid cycle (20%)" "magnesium ion binding (20%) isocitrate dehydrogenase (NADP+) activity (20%) NAD binding (20%)" "IPR004439 (33.3%) IPR019818 (33.3%) IPR024084 (33.3%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (33.3%) Isocitrate/isopropylmalate dehydrogenase, conserved site (33.3%) Isopropylmalate dehydrogenase-like domain (33.3%)" AGPGSLGPVNMPIPVVIDR root 6.1.1.15 (100%) proline--tRNA ligase (100%) "GO:0006433 (19.9%) GO:0106074 (0.1%)" GO:0005829 (19.9%) "GO:0004827 (19.9%) GO:0002161 (19.8%) GO:0005524 (19.8%)" "prolyl-tRNA aminoacylation (19.9%) aminoacyl-tRNA metabolism involved in translational fidelity (0.1%)" cytosol (19.9%) "proline-tRNA ligase activity (19.9%) aminoacyl-tRNA deacylase activity (19.8%) ATP binding (19.8%)" "IPR007214 (7.9%) IPR036754 (7.9%) IPR045864 (7.9%)" "YbaK/aminoacyl-tRNA synthetase-associated domain (7.9%) YbaK/aminoacyl-tRNA synthetase-associated domain superfamily (7.9%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (7.9%)" LVDIAEADKDHASRDFLFWFVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.3%) GO:0006879 (14.3%)" GO:0005829 (14.3%) "GO:0004322 (14.3%) GO:0008198 (14.3%) GO:0008199 (14.3%)" "iron ion transport (14.3%) intracellular iron ion homeostasis (14.3%)" cytosol (14.3%) "ferroxidase activity (14.3%) ferrous iron binding (14.3%) ferric iron binding (14.3%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" GELHCVGATTLDEYR root "3.4.21.- (50%) 3.6.1.15 (25%) 3.6.1.3 (25%)" "Serine endopeptidases (50%) nucleoside-triphosphate phosphatase (25%) Deleted entry (25%)" "GO:0034605 (17.3%) GO:0042026 (16.5%) GO:0006508 (3.1%)" "GO:0005737 (9%) GO:0005829 (8.2%) GO:0016020 (0%)" "GO:0005524 (17.3%) GO:0016887 (17.3%) GO:0042802 (8.2%)" "cellular response to heat (17.3%) protein refolding (16.5%) proteolysis (3.1%)" "cytoplasm (9%) cytosol (8.2%) membrane (0%)" "ATP binding (17.3%) ATP hydrolysis activity (17.3%) identical protein binding (8.2%)" "IPR050130 (8.5%) IPR027417 (8.5%) IPR018368 (8.5%)" "ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.5%) P-loop containing nucleoside triphosphate hydrolase (8.5%) ClpA/B, conserved site 1 (8.5%)" VEDALHATR root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.4%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (16.2%) GO:1990220 (0%) GO:0016020 (0%)" "GO:0140662 (17.4%) GO:0005524 (17.4%) GO:0016853 (17%)" "protein refolding (17.4%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (16.2%) GroEL-GroES complex (0%) membrane (0%)" "ATP-dependent protein folding chaperone (17.4%) ATP binding (17.4%) isomerase activity (17%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR027409 (16.7%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like apical domain superfamily (16.7%)" AQAQEIHAFIR Pseudomonadati Bacteria Pseudomonadati 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" TVYRPSHADYTYQTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.2.3.5 (100%) chorismate synthase (100%) "GO:0008652 (16.7%) GO:0009073 (16.7%) GO:0009423 (16.7%)" GO:0005829 (16.7%) "GO:0004107 (16.7%) GO:0010181 (16.7%)" "amino acid biosynthetic process (16.7%) aromatic amino acid family biosynthetic process (16.7%) chorismate biosynthetic process (16.7%)" cytosol (16.7%) "chorismate synthase activity (16.7%) FMN binding (16.7%)" "IPR000453 (33.3%) IPR020541 (33.3%) IPR035904 (33.3%)" "Chorismate synthase (33.3%) Chorismate synthase, conserved site (33.3%) Chorismate synthase AroC superfamily (33.3%)" EMVANATGCSSIYSGSVPSTPYTTNAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (72.7%) 1.2.7.- (27.3%)" "pyruvate synthase (72.7%) With an iron-sulfur protein as acceptor (27.3%)" "GO:0006979 (15.1%) GO:0022900 (15.1%) GO:0044281 (9.2%)" "GO:0005506 (15.1%) GO:0030976 (15.1%) GO:0051539 (15.1%)" "response to oxidative stress (15.1%) electron transport chain (15.1%) small molecule metabolic process (9.2%)" "iron ion binding (15.1%) thiamine pyrophosphate binding (15.1%) 4 iron, 4 sulfur cluster binding (15.1%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" HFDGTTGFVYASPGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" EGNSAGKETSAKSEEKASTPAQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.3.1.61 (98.5%) 2.3.1.- (1.5%)" "dihydrolipoyllysine-residue succinyltransferase (98.5%) Transferring groups other than amino-acyl groups (1.5%)" "GO:0006099 (20%) GO:0033512 (19.4%) GO:0006086 (0.1%)" "GO:0005829 (20%) GO:0045252 (19.5%) GO:0005737 (0.2%)" "GO:0004149 (20.1%) GO:0031405 (0.2%) GO:0016407 (0.2%)" "tricarboxylic acid cycle (20%) L-lysine catabolic process to acetyl-CoA via saccharopine (19.4%) pyruvate decarboxylation to acetyl-CoA (0.1%)" "cytosol (20%) oxoglutarate dehydrogenase complex (19.5%) cytoplasm (0.2%)" "dihydrolipoyllysine-residue succinyltransferase activity (20.1%) lipoic acid binding (0.2%) acetyltransferase activity (0.2%)" "IPR000089 (11.2%) IPR011053 (11.2%) IPR036625 (11.2%)" "Biotin/lipoyl attachment (11.2%) Single hybrid motif (11.2%) E3-binding domain superfamily (11.2%)" ACGKPVNYHFAPR root "5.1.3.2 (99.6%) 5.1.3.7 (0.4%)" "UDP-glucose 4-epimerase (99.6%) UDP-N-acetylglucosamine 4-epimerase (0.4%)" "GO:0006012 (31.5%) GO:0005996 (1.2%) GO:0005975 (0.2%)" "GO:0005829 (32.6%) GO:0005737 (0.2%)" "GO:0003978 (32.7%) GO:0016853 (0.8%) GO:0016829 (0.2%)" "galactose metabolic process (31.5%) monosaccharide metabolic process (1.2%) carbohydrate metabolic process (0.2%)" "cytosol (32.6%) cytoplasm (0.2%)" "UDP-glucose 4-epimerase activity (32.7%) isomerase activity (0.8%) lyase activity (0.2%)" "IPR036291 (33.8%) IPR005886 (32.3%) IPR001509 (26.5%)" "NAD(P)-binding domain superfamily (33.8%) UDP-glucose 4-epimerase (32.3%) NAD-dependent epimerase/dehydratase (26.5%)" SGVDNAFANSGAADCETLQNLYAAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (44%) IPR019734 (44%) IPR013105 (12%)" "Tetratricopeptide-like helical domain superfamily (44%) Tetratricopeptide repeat (44%) Tetratricopeptide repeat 2 (12%)" YGMIDDVLTRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.21.92 (100%) endopeptidase Clp (100%) GO:0006515 (16.7%) "GO:0005737 (16.7%) GO:0009368 (16.7%)" "GO:0004176 (16.7%) GO:0004252 (16.7%) GO:0051117 (16.7%)" protein quality control for misfolded or incompletely synthesized proteins (16.7%) "cytoplasm (16.7%) endopeptidase Clp complex (16.7%)" "ATP-dependent peptidase activity (16.7%) serine-type endopeptidase activity (16.7%) ATPase binding (16.7%)" "IPR001907 (33.3%) IPR023562 (33.3%) IPR029045 (33.3%)" "ATP-dependent Clp protease proteolytic subunit (33.3%) Clp protease proteolytic subunit /Translocation-enhancing protein TepA (33.3%) ClpP/crotonase-like domain superfamily (33.3%)" NKYDLCVFDVMMPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006355 (20%) GO:0000160 (0.2%)" "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" "regulation of DNA-templated transcription (20%) phosphorelay signal transduction system (0.2%)" "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" KSAAATEAPAAPAAETTEEAPKAE Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.3%) IPR036373 (33.3%) IPR047859 (33.3%)" "Large ribosomal subunit protein bL17 (33.3%) Large ribosomal subunit protein bL17 superfamily (33.3%) Large ribosomal subunit protein bL17, conserved site (33.3%)" EALELRDGDKSR root "4.2.1.11 (100%) 6.3.4.2 (0%)" "phosphopyruvate hydratase (100%) CTP synthase (glutamine hydrolyzing) (0%)" "GO:0006096 (18%) GO:0061621 (0.3%) GO:0006094 (0%)" "GO:0000015 (18.2%) GO:0005576 (13.4%) GO:0009986 (13%)" "GO:0000287 (18.2%) GO:0004634 (18.2%) GO:0016829 (0.1%)" "glycolytic process (18%) canonical glycolysis (0.3%) gluconeogenesis (0%)" "phosphopyruvate hydratase complex (18.2%) extracellular region (13.4%) cell surface (13%)" "magnesium ion binding (18.2%) phosphopyruvate hydratase activity (18.2%) lyase activity (0.1%)" "IPR000941 (16.8%) IPR020811 (16.8%) IPR029017 (16.8%)" "Enolase (16.8%) Enolase, N-terminal (16.8%) Enolase-like, N-terminal (16.8%)" MLDEYLVMIEEAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.7%) GO:0005737 (16.4%) "GO:0004829 (16.7%) GO:0005524 (16.7%) GO:0000049 (16.6%)" threonyl-tRNA aminoacylation (16.7%) cytoplasm (16.4%) "threonine-tRNA ligase activity (16.7%) ATP binding (16.7%) tRNA binding (16.6%)" "IPR012947 (7.9%) IPR006195 (7.8%) IPR018163 (7.8%)" "Threonyl/alanyl tRNA synthetase, SAD (7.9%) Aminoacyl-tRNA synthetase, class II (7.8%) Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily (7.8%)" FQVAQTMEEATK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.2.1.5 (95.5%) 6.2.1.- (4.5%)" "succinate--CoA ligase (ADP-forming) (95.5%) Acid--thiol ligases (4.5%)" "GO:0006099 (13.2%) GO:0006104 (13.2%)" "GO:0005829 (13.2%) GO:0042709 (13.2%)" "GO:0000287 (13.2%) GO:0004775 (13.2%) GO:0005524 (13.2%)" "tricarboxylic acid cycle (13.2%) succinyl-CoA metabolic process (13.2%)" "cytosol (13.2%) succinate-CoA ligase complex (13.2%)" "magnesium ion binding (13.2%) succinate-CoA ligase (ADP-forming) activity (13.2%) ATP binding (13.2%)" "IPR005809 (16.7%) IPR005811 (16.7%) IPR013650 (16.7%)" "Succinate--CoA ligase-like, beta subunit (16.7%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (16.7%) ATP-grasp fold, succinyl-CoA synthetase-type (16.7%)" TNAENEFVTIKK Mammalia Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia "GO:0031424 (10%) GO:0045109 (10%) GO:0051290 (4.3%)" "GO:0045095 (11.8%) GO:0005615 (9.5%) GO:0005737 (9%)" "GO:0030280 (10.3%) GO:0046982 (4.3%) GO:0030246 (4.1%)" "keratinization (10%) intermediate filament organization (10%) protein heterotetramerization (4.3%)" "keratin filament (11.8%) extracellular space (9.5%) cytoplasm (9%)" "structural constituent of skin epidermis (10.3%) protein heterodimerization activity (4.3%) carbohydrate binding (4.1%)" "IPR039008 (20.9%) IPR003054 (20.6%) IPR032444 (20.4%)" "Intermediate filament, rod domain (20.9%) Keratin, type II (20.6%) Keratin type II head (20.4%)" LDDIASDGIELVRK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (16.9%) GO:0006098 (16.9%) GO:0042182 (15.4%)" GO:0005737 (16.9%) "GO:0004801 (16.9%) GO:0016832 (16.9%)" "carbohydrate metabolic process (16.9%) pentose-phosphate shunt (16.9%) ketone catabolic process (15.4%)" cytoplasm (16.9%) "transaldolase activity (16.9%) aldehyde-lyase activity (16.9%)" "IPR001585 (16.7%) IPR004731 (16.7%) IPR013785 (16.7%)" "Transaldolase/Fructose-6-phosphate aldolase (16.7%) Transaldolase type 3B/Fructose-6-phosphate aldolase (16.7%) Aldolase-type TIM barrel (16.7%)" VNFASIKNPMKYPDFLEVQLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.8%) IPR007121 (7.8%) IPR007641 (7.8%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.8%) RNA polymerase, beta subunit, conserved site (7.8%) RNA polymerase Rpb2, domain 7 (7.8%)" EMQENGWESGPDDEELFELAMHDR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.1.3.1 (100%) methylmalonyl-CoA carboxytransferase (100%) "GO:0003824 (87.5%) GO:0047154 (12.5%)" "catalytic activity (87.5%) methylmalonyl-CoA carboxytransferase activity (12.5%)" "IPR000891 (25%) IPR003379 (25%) IPR013785 (25%)" "Pyruvate carboxyltransferase (25%) Carboxylase, conserved domain (25%) Aldolase-type TIM barrel (25%)" VTTVLVPSQLQDKNNK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0015920 (16.6%) GO:0043165 (15.8%)" "GO:0009279 (16.8%) GO:0030288 (16.8%) GO:0005886 (0.2%)" "GO:0017089 (16.8%) GO:0001530 (16.4%) GO:0015221 (0.2%)" "lipopolysaccharide transport (16.6%) Gram-negative-bacterium-type cell outer membrane assembly (15.8%)" "cell outer membrane (16.8%) outer membrane-bounded periplasmic space (16.8%) plasma membrane (0.2%)" "glycolipid transfer activity (16.8%) lipopolysaccharide binding (16.4%) lipopolysaccharide transmembrane transporter activity (0.2%)" "IPR052037 (33.5%) IPR005653 (33.1%) IPR014340 (32.7%)" "Lipopolysaccharide export system LptA (33.5%) Organic solvent tolerance-like, N-terminal (33.1%) Lipopolysaccharide export system protein LptA (32.7%)" GWVEALQLMTEGAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" EAANEYTLTEGSTAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) WRMPIEQVIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (22.8%) GO:0009263 (8.3%)" "GO:0004748 (22.8%) GO:0031419 (22.8%) GO:0000166 (14.4%)" "DNA biosynthetic process (22.8%) deoxyribonucleotide biosynthetic process (8.3%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (22.8%) cobalamin binding (22.8%) nucleotide binding (14.4%)" "IPR000788 (29.8%) IPR013344 (29.8%) IPR050862 (29.8%)" "Ribonucleotide reductase large subunit, C-terminal (29.8%) Ribonucleotide reductase, adenosylcobalamin-dependent (29.8%) Ribonucleoside diphosphate reductase class-2 (29.8%)" GITEPTPTFSACFGAAFLSLHPTKYAEELVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.5%) GO:0005829 (17.5%) "GO:0004612 (17.5%) GO:0005524 (17.5%) GO:0046872 (16.4%)" gluconeogenesis (17.5%) cytosol (17.5%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.5%) ATP binding (17.5%) metal ion binding (16.4%)" "IPR001272 (25.6%) IPR013035 (25.6%) IPR008210 (24.4%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.6%) Phosphoenolpyruvate carboxykinase, C-terminal (25.6%) Phosphoenolpyruvate carboxykinase, N-terminal (24.4%)" DAGNIIIDDDDISLLPLHAR root "7.5.2.- (66.7%) 3.6.3.- (33.3%)" "Linked to the hydrolysis of a nucleoside triphosphate (66.7%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (33.3%)" "GO:0055085 (19.4%) GO:0015920 (0.2%) GO:0043165 (0.2%)" "GO:0043190 (19.4%) GO:0005737 (18.8%) GO:0005886 (0.9%)" "GO:0005524 (20.7%) GO:0016887 (19.8%) GO:0016787 (0.2%)" "transmembrane transport (19.4%) lipopolysaccharide transport (0.2%) Gram-negative-bacterium-type cell outer membrane assembly (0.2%)" "ATP-binding cassette (ABC) transporter complex (19.4%) cytoplasm (18.8%) plasma membrane (0.9%)" "ATP binding (20.7%) ATP hydrolysis activity (19.8%) hydrolase activity (0.2%)" "IPR027417 (14.7%) IPR051120 (14.7%) IPR003439 (14.5%)" "P-loop containing nucleoside triphosphate hydrolase (14.7%) ABC Transporter, Amino Acid and LPS Transport (14.7%) ABC transporter-like, ATP-binding domain (14.5%)" GVLIIPTLEEAKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0009113 (20%) GO:0006189 (19.8%)" "GO:0004637 (20%) GO:0005524 (20%) GO:0046872 (20%)" "purine nucleobase biosynthetic process (20%) 'de novo' IMP biosynthetic process (19.8%)" "phosphoribosylamine-glycine ligase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000115 (11.2%) IPR011761 (11.2%) IPR020561 (11.2%)" "Phosphoribosylglycinamide synthetase (11.2%) ATP-grasp fold (11.2%) Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (11.2%)" NGVHVVTVNDYLSKR Bacteria Bacteria 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (10.2%) GO:0008564 (0.4%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (10.2%) protein-exporting ATPase activity (0.4%)" "IPR000185 (8%) IPR011115 (8%) IPR014018 (8%)" "Protein translocase subunit SecA (8%) SecA DEAD-like, N-terminal (8%) SecA motor DEAD (8%)" EQFDKGLQILKELDIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" DALLENVTVAADGKINFADK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.4%) GO:0005829 (17.4%) "GO:0004612 (17.4%) GO:0005524 (17.4%) GO:0046872 (17.4%)" gluconeogenesis (17.4%) cytosol (17.4%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.4%) ATP binding (17.4%) metal ion binding (17.4%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" FGDVENPLLVSVR root 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25.2%) GO:0016301 (25.2%) GO:0050242 (25.2%)" "ATP binding (25.2%) kinase activity (25.2%) pyruvate, phosphate dikinase activity (25.2%)" "IPR002192 (10.3%) IPR010121 (10.3%) IPR013815 (10.2%)" "Pyruvate phosphate dikinase, AMP/ATP-binding (10.3%) Pyruvate, phosphate dikinase (10.3%) ATP-grasp fold, subdomain 1 (10.2%)" VYKGGEREFEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.2.1.49 (100%) alpha-N-acetylgalactosaminidase (100%) "GO:0000166 (50%) GO:0016798 (44.4%) GO:0008456 (5.6%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (44.4%) alpha-N-acetylgalactosaminidase activity (5.6%)" "IPR000683 (18%) IPR006311 (18%) IPR036291 (18%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (18%) Twin-arginine translocation pathway, signal sequence (18%) NAD(P)-binding domain superfamily (18%)" ITDFQAALGISQLKR Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.6.1.92 (87.1%) 2.6.1.- (9.7%) 2.6.1.87 (3.2%)" "UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase (87.1%) Transaminases (9.7%) UDP-4-amino-4-deoxy-L-arabinose aminotransferase (3.2%)" GO:0000271 (33.1%) "GO:0008483 (33.1%) GO:0030170 (33.1%) GO:0099620 (0.7%)" polysaccharide biosynthetic process (33.1%) "transaminase activity (33.1%) pyridoxal phosphate binding (33.1%) UDP-4-amino-4-deoxy-L-arabinose aminotransferase (0.7%)" "IPR000653 (20.3%) IPR015421 (20.3%) IPR015422 (20.3%)" "DegT/DnrJ/EryC1/StrS aminotransferase (20.3%) Pyridoxal phosphate-dependent transferase, major domain (20.3%) Pyridoxal phosphate-dependent transferase, small domain (20.3%)" SGSVCLAYETVTDK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.1.1 (100%) alanine dehydrogenase (100%) "GO:0042853 (25%) GO:0006524 (1.1%)" GO:0005886 (26.1%) "GO:0000286 (26.1%) GO:0000166 (21.7%)" "L-alanine catabolic process (25%) alanine catabolic process (1.1%)" plasma membrane (26.1%) "alanine dehydrogenase activity (26.1%) nucleotide binding (21.7%)" "IPR007698 (20.2%) IPR007886 (20.2%) IPR008143 (20.2%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (20.2%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (20.2%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 (20.2%)" ILHIQQQLAGEQVALSDEVNQSEQTTNFHNR root 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33%) GO:0006543 (33%) GO:0010447 (0.2%)" GO:0032991 (0.2%) "GO:0004359 (33%) GO:0016787 (0.2%)" "glutamate biosynthetic process (33%) L-glutamine catabolic process (33%) response to acidic pH (0.2%)" protein-containing complex (0.2%) "glutaminase activity (33%) hydrolase activity (0.2%)" "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" MMEYDEYITSDHIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005524 (50.2%) GO:0016887 (49.8%)" "ATP binding (50.2%) ATP hydrolysis activity (49.8%)" "IPR003439 (20.1%) IPR027417 (20.1%) IPR051309 (20.1%)" "ABC transporter-like, ATP-binding domain (20.1%) P-loop containing nucleoside triphosphate hydrolase (20.1%) ABC transporter ABCF subfamily ATPase (20.1%)" LVSGVDIWMNTPTRPLEASGTSGEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "2.4.1.1 (91.9%) 2.4.1.8 (8.1%)" "glycogen phosphorylase (91.9%) maltose phosphorylase (8.1%)" "GO:0005975 (32.9%) GO:0005978 (0.2%)" "GO:0008184 (33.1%) GO:0030170 (33.1%) GO:0050082 (0.5%)" "carbohydrate metabolic process (32.9%) glycogen biosynthetic process (0.2%)" "glycogen phosphorylase activity (33.1%) pyridoxal phosphate binding (33.1%) maltose phosphorylase activity (0.5%)" "IPR000811 (25%) IPR011834 (25%) IPR052182 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen_Maltodextrin_Phosphorylase (25%)" VTPSHGGQGYVCPIDLPAYQAAEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.4.13.- (66.7%) 3.5.1.- (33.3%)" "Dipeptidases (66.7%) In linear amides (33.3%)" "GO:0046872 (50%) GO:0016787 (40.9%) GO:0016805 (9.1%)" "metal ion binding (50%) hydrolase activity (40.9%) dipeptidase activity (9.1%)" "IPR002933 (33.3%) IPR011650 (33.3%) IPR051458 (33.3%)" "Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%) Cytosolic and Metallo Dipeptidase (33.3%)" NIFEIDGKFDNEHIYPGNIIPLMNSEGQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0042026 (32.6%) GO:0005737 (32.6%) "GO:0003755 (32.6%) GO:0016853 (2.2%)" protein refolding (32.6%) cytoplasm (32.6%) "peptidyl-prolyl cis-trans isomerase activity (32.6%) isomerase activity (2.2%)" "IPR001179 (33.3%) IPR046357 (33.3%) IPR048261 (33.3%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) PPIase chaperone SlpA/SlyD-like, insertion domain superfamily (33.3%)" QYGSDKPDLR root "6.1.1.12 (68.8%) 6.1.1.23 (31.3%)" "aspartate--tRNA ligase (68.8%) aspartate--tRNA(Asn) ligase (31.3%)" "GO:0006422 (18.7%) GO:0006418 (0.4%)" "GO:0005737 (14.9%) GO:0005739 (4.1%)" "GO:0004815 (19%) GO:0005524 (19%) GO:0003676 (15.7%)" "aspartyl-tRNA aminoacylation (18.7%) tRNA aminoacylation for protein translation (0.4%)" "cytoplasm (14.9%) mitochondrion (4.1%)" "aspartate-tRNA ligase activity (19%) ATP binding (19%) nucleic acid binding (15.7%)" "IPR004115 (10%) IPR004364 (10%) IPR045864 (10%)" "GAD-like domain superfamily (10%) Aminoacyl-tRNA synthetase, class II (D/K/N) (10%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (10%)" LPISIPAGVTVTLKDDVVTVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0002181 (24.8%) "GO:0022625 (24.8%) GO:0005840 (0.7%)" "GO:0003735 (24.8%) GO:0019843 (24.8%)" cytoplasmic translation (24.8%) "cytosolic large ribosomal subunit (24.8%) ribosome (0.7%)" "structural constituent of ribosome (24.8%) rRNA binding (24.8%)" "IPR000702 (20%) IPR002358 (20%) IPR019906 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, conserved site (20%) Large ribosomal subunit protein uL6, bacteria (20%)" VSTTIEVSSPHKWTAETPYLYTLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.1%) IPR006101 (7.1%) IPR006102 (7.1%)" "Beta galactosidase small chain/ domain 5 (7.1%) Glycoside hydrolase, family 2 (7.1%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.1%)" IGQVKDENITVVWVPGAYELPLAAGALAK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.5.1.78 (100%) 6,7-dimethyl-8-ribityllumazine synthase (100%) GO:0009231 (24.3%) "GO:0005829 (24.3%) GO:0009349 (24.3%) GO:0005737 (0.2%)" "GO:0000906 (24.3%) GO:0016874 (2.3%) GO:0016740 (0.3%)" riboflavin biosynthetic process (24.3%) "cytosol (24.3%) riboflavin synthase complex (24.3%) cytoplasm (0.2%)" "6,7-dimethyl-8-ribityllumazine synthase activity (24.3%) ligase activity (2.3%) transferase activity (0.3%)" "IPR002180 (33.3%) IPR034964 (33.3%) IPR036467 (33.3%)" "Lumazine/riboflavin synthase (33.3%) Lumazine synthase (33.3%) Lumazine/riboflavin synthase superfamily (33.3%)" YQYTENRVDDFIDYTQQQK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0044718 (24.9%) GO:0009279 (24.9%) "GO:0015344 (24.9%) GO:0038023 (24.9%) GO:0047091 (0.4%)" siderophore transmembrane transport (24.9%) cell outer membrane (24.9%) "siderophore uptake transmembrane transporter activity (24.9%) signaling receptor activity (24.9%) L-lysine 6-monooxygenase (NADPH) activity (0.4%)" "IPR000531 (14.5%) IPR010105 (14.5%) IPR036942 (14.5%)" "TonB-dependent receptor-like, beta-barrel (14.5%) TonB-dependent siderophore receptor (14.5%) TonB-dependent receptor-like, beta-barrel domain superfamily (14.5%)" NTTAPANEWIAGGIPVTMMMNMEK STQHIIQCVEAGADVATCPLSAIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (16.9%) GO:0006098 (16.9%) GO:0042182 (15.3%)" GO:0005737 (16.9%) "GO:0004801 (16.9%) GO:0016832 (16.9%)" "carbohydrate metabolic process (16.9%) pentose-phosphate shunt (16.9%) ketone catabolic process (15.3%)" cytoplasm (16.9%) "transaldolase activity (16.9%) aldehyde-lyase activity (16.9%)" "IPR001585 (16.7%) IPR004731 (16.7%) IPR013785 (16.7%)" "Transaldolase/Fructose-6-phosphate aldolase (16.7%) Transaldolase type 3B/Fructose-6-phosphate aldolase (16.7%) Aldolase-type TIM barrel (16.7%)" QIYPADFIAEGVDQTR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004822 (14.3%)" isoleucyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) isoleucine-tRNA ligase activity (14.3%)" "IPR002300 (12.5%) IPR002301 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class Ia (12.5%) Isoleucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" QNLESFFPEIPVEFHINK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.5.2.17 (100%) hydroxyisourate hydrolase (100%) "GO:0006144 (33.1%) GO:0051289 (0.3%)" "GO:0042597 (32.5%) GO:0032991 (0.3%)" "GO:0033971 (32.8%) GO:0016787 (0.7%) GO:0042802 (0.3%)" "purine nucleobase metabolic process (33.1%) protein homotetramerization (0.3%)" "periplasmic space (32.5%) protein-containing complex (0.3%)" "hydroxyisourate hydrolase activity (32.8%) hydrolase activity (0.7%) identical protein binding (0.3%)" "IPR023416 (16.9%) IPR036817 (16.9%) IPR014306 (16.8%)" "Transthyretin/hydroxyisourate hydrolase domain (16.9%) Transthyretin/hydroxyisourate hydrolase domain superfamily (16.9%) Hydroxyisourate hydrolase (16.8%)" RTADEQIDYLEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.5%) "GO:0000015 (16.5%) GO:0005576 (16.5%) GO:0009986 (16.5%)" "GO:0000287 (16.5%) GO:0004634 (16.5%) GO:0016829 (0.9%)" glycolytic process (16.5%) "phosphopyruvate hydratase complex (16.5%) extracellular region (16.5%) cell surface (16.5%)" "magnesium ion binding (16.5%) phosphopyruvate hydratase activity (16.5%) lyase activity (0.9%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" TDLEEEAPSVDIR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0004866 (100%) endopeptidase inhibitor activity (100%) "IPR001599 (20%) IPR002890 (20%) IPR008930 (20%)" "Alpha-2-macroglobulin (20%) Macroglobulin domain (20%) Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid (20%)" DMTCQEFIDLNPK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:1990451 (32.5%) GO:0009268 (0.4%) GO:0010447 (0.4%)" "GO:0042597 (33.6%) GO:0030288 (0.4%)" GO:0051082 (32.9%) "cellular stress response to acidic pH (32.5%) response to pH (0.4%) response to acidic pH (0.4%)" "periplasmic space (33.6%) outer membrane-bounded periplasmic space (0.4%)" unfolded protein binding (32.9%) "IPR010486 (33.7%) IPR038303 (33.7%) IPR028623 (32.7%)" "HNS-dependent expression A/B (33.7%) HNS-dependent expression A/B superfamily (33.7%) HNS-dependent expression B (32.7%)" TLDEVKPEIAELAETYPEVK root 2.3.1.129 (100%) acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (100%) GO:0009245 (25.1%) "GO:0016020 (25.1%) GO:0005737 (23.6%) GO:0005829 (0.2%)" "GO:0008780 (25.1%) GO:0016746 (0.5%) GO:0042802 (0.2%)" lipid A biosynthetic process (25.1%) "membrane (25.1%) cytoplasm (23.6%) cytosol (0.2%)" "acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity (25.1%) acyltransferase activity (0.5%) identical protein binding (0.2%)" "IPR010137 (16.8%) IPR011004 (16.8%) IPR029098 (16.8%)" "Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (16.8%) Trimeric LpxA-like superfamily (16.8%) UDP N-acetylglucosamine O-acyltransferase, C-terminal (16.8%)" SAASQVELTPEGIIK Bacteria Bacteria IPR032265 (100%) Protein of unknown function DUF4831 (100%) TKLETPEQFEK root 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" LEEHLVEGALYAAGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.22 (100%) ribosylnicotinamide kinase (100%) "GO:0016301 (75%) GO:0050262 (25%)" "kinase activity (75%) ribosylnicotinamide kinase activity (25%)" "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" YRADVLIEDHLGKIEEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.5%) GO:0015966 (12.5%)" "GO:0005737 (12.5%) GO:0070062 (12.5%) GO:1990742 (12.5%)" "GO:0004081 (12.5%) GO:0004820 (12.5%) GO:0005524 (12.5%)" "glycyl-tRNA aminoacylation (12.5%) diadenosine tetraphosphate biosynthetic process (12.5%)" "cytoplasm (12.5%) extracellular exosome (12.5%) microvesicle (12.5%)" "bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.5%) glycine-tRNA ligase activity (12.5%) ATP binding (12.5%)" "IPR002314 (11.1%) IPR002315 (11.1%) IPR004154 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Glycyl-tRNA synthetase (11.1%) Anticodon-binding (11.1%)" IGDEVEVYIESQEDKKGQLILSHKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" VSIISGGGSGHEPAHAGFVGK root "2.7.1.121 (71.8%) 2.7.1.29 (12.8%) 2.7.1.28 (7.7%)" "phosphoenolpyruvate--glycerone phosphotransferase (71.8%) glycerone kinase (12.8%) triokinase (7.7%)" "GO:0019563 (21.3%) GO:0019588 (0.8%)" GO:0005829 (22%) "GO:0004371 (22%) GO:0005524 (20.5%) GO:0047324 (9.4%)" "glycerol catabolic process (21.3%) anaerobic glycerol catabolic process (0.8%)" cytosol (22%) "glycerone kinase activity (22%) ATP binding (20.5%) phosphoenolpyruvate-glycerone phosphotransferase activity (9.4%)" "IPR004006 (19.6%) IPR050861 (19.6%) IPR004007 (18.2%)" "DhaK domain (19.6%) Dihydroxyacetone Kinase (DAK) (19.6%) DhaL domain (18.2%)" ISYISTGGGAFLEFVEGK root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.6%) GO:0006094 (16.6%) GO:0006098 (0%)" "GO:0005829 (16.6%) GO:0005737 (0%)" "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "glycolytic process (16.6%) gluconeogenesis (16.6%) pentose-phosphate shunt (0%)" "cytosol (16.6%) cytoplasm (0%)" "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (25.4%) IPR015824 (25.4%) IPR036043 (25.4%)" "Phosphoglycerate kinase (25.4%) Phosphoglycerate kinase, N-terminal (25.4%) Phosphoglycerate kinase superfamily (25.4%)" NIELKVPFVTAAMDTVTEAK Pseudomonadati Bacteria Pseudomonadati 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (21.4%) GO:0006177 (19%)" "GO:0003938 (21.4%) GO:0000166 (19%) GO:0046872 (19%)" "GTP biosynthetic process (21.4%) GMP biosynthetic process (19%)" "IMP dehydrogenase activity (21.4%) nucleotide binding (19%) metal ion binding (19%)" "IPR001093 (17.6%) IPR005990 (17.6%) IPR013785 (17.6%)" "IMP dehydrogenase/GMP reductase (17.6%) Inosine-5'-monophosphate dehydrogenase (17.6%) Aldolase-type TIM barrel (17.6%)" ELQNFSQEVINVICHFR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.3.3 (100%) N-acetylneuraminate lyase (100%) GO:0005737 (50%) "GO:0016829 (43.1%) GO:0008747 (6.9%)" cytoplasm (50%) "lyase activity (43.1%) N-acetylneuraminate lyase activity (6.9%)" "IPR002220 (50%) IPR013785 (50%)" "DapA-like (50%) Aldolase-type TIM barrel (50%)" LWCGDTGPEVVQR root "GO:0006281 (28.3%) GO:0005975 (0.3%) GO:0010212 (0.3%)" "GO:0005737 (31.4%) GO:0005829 (0.3%) GO:0060187 (0.3%)" "GO:0046872 (31.7%) GO:0016787 (6.5%) GO:0005524 (0.3%)" "DNA repair (28.3%) carbohydrate metabolic process (0.3%) response to ionizing radiation (0.3%)" "cytoplasm (31.4%) cytosol (0.3%) cell pole (0.3%)" "metal ion binding (31.7%) hydrolase activity (6.5%) ATP binding (0.3%)" "IPR002678 (48.1%) IPR036069 (48.1%) IPR003778 (0.5%)" "DUF34/NIF3 (48.1%) DUF34/NIF3 superfamily (48.1%) Carboxyltransferase domain, subdomain A and B (0.5%)" KLGDTHEEGFTLKPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" AETGSLDLAATCKEPNSGR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (20%) IPR011013 (20%) IPR014718 (20%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (20%) Galactose mutarotase-like domain superfamily (20%) Glycoside hydrolase-type carbohydrate-binding (20%)" QVAESPVGLIATTDDDFVYNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR041662 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like 2 (50%)" GIDTDLLLPSIHDALTIKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0005886 (22.8%) GO:0045259 (22.8%)" "GO:0005524 (22.8%) GO:0046933 (22.8%) GO:0016787 (7%)" "plasma membrane (22.8%) proton-transporting ATP synthase complex (22.8%)" "ATP binding (22.8%) proton-transporting ATP synthase activity, rotational mechanism (22.8%) hydrolase activity (7%)" "IPR004100 (10.7%) IPR050053 (10.7%) IPR000194 (9.9%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.7%) ATPase alpha/beta chains (10.7%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (9.9%)" SFDGDKSVEFNYCSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR024299 (25%) IPR035376 (25%) IPR038143 (25%)" "NigD-like N-terminal OB domain (25%) NigD-like, C-terminal domain (25%) NigD-like, C-terminal domain superfamily (25%)" KIPEIVECHFTTGPYTMLTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0043200 (31.4%) GO:0006355 (0.4%)" GO:0005829 (31.4%) "GO:0043565 (36.5%) GO:0003700 (0.4%)" "response to amino acid (31.4%) regulation of DNA-templated transcription (0.4%)" cytosol (31.4%) "sequence-specific DNA binding (36.5%) DNA-binding transcription factor activity (0.4%)" "IPR000485 (16.4%) IPR011008 (16.4%) IPR019887 (16.4%)" "AsnC-type HTH domain (16.4%) Dimeric alpha-beta barrel (16.4%) Transcription regulator AsnC/Lrp, ligand binding domain (16.4%)" MNQYETVFILTPVLSDVQMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.9%) "GO:0005840 (17%) GO:0005737 (16.7%) GO:1990904 (15.7%)" "GO:0003735 (16.9%) GO:0070181 (16.7%) GO:0019843 (0.2%)" translation (16.9%) "ribosome (17%) cytoplasm (16.7%) ribonucleoprotein complex (15.7%)" "structural constituent of ribosome (16.9%) small ribosomal subunit rRNA binding (16.7%) rRNA binding (0.2%)" "IPR014717 (25.1%) IPR035980 (25.1%) IPR000529 (24.9%)" "Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25.1%) Small ribosomal subunit protein bS6 superfamily (25.1%) Small ribosomal subunit protein bS6 (24.9%)" QYAGFSTAEESNAFYR root 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) "GO:0005737 (19.7%) GO:0005739 (0.3%)" "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (19.8%)" propionate metabolic process, methylmalonyl pathway (20%) "cytoplasm (19.7%) mitochondrion (0.3%)" "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (19.8%)" "IPR006099 (16.8%) IPR016176 (16.8%) IPR006098 (16.7%)" "Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.8%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (16.8%) Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%)" TQTEAMSAALGGVDSMTVVPFDKTYETPDEFSER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25.6%) "GO:0004494 (25.6%) GO:0031419 (25.6%) GO:0046872 (23.2%)" lactate fermentation to propionate and acetate (25.6%) "methylmalonyl-CoA mutase activity (25.6%) cobalamin binding (25.6%) metal ion binding (23.2%)" "IPR004608 (25.6%) IPR006099 (25.6%) IPR016176 (25.6%)" "Methylmalonyl-CoA mutase, small subunit (25.6%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25.6%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25.6%)" KQPLEFVFDK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.1%) GO:0006164 (1.5%)" GO:0005737 (20.6%) "GO:0004642 (20.6%) GO:0005524 (19.1%) GO:0046872 (19.1%)" "'de novo' IMP biosynthetic process (19.1%) purine nucleotide biosynthetic process (1.5%)" cytoplasm (20.6%) "phosphoribosylformylglycinamidine synthase activity (20.6%) ATP binding (19.1%) metal ion binding (19.1%)" "IPR029062 (11.8%) IPR010918 (11.3%) IPR036676 (11.3%)" "Class I glutamine amidotransferase-like (11.8%) PurM-like, C-terminal domain (11.3%) PurM-like, C-terminal domain superfamily (11.3%)" SAPYFLEILDKR root "3.1.3.23 (98.2%) 3.1.3.- (1.8%)" "sugar-phosphatase (98.2%) Phosphoric monoester hydrolases (1.8%)" GO:0016311 (0.1%) GO:0005829 (33.2%) "GO:0000287 (33.2%) GO:0050308 (19.3%) GO:0016791 (14%)" dephosphorylation (0.1%) cytosol (33.2%) "magnesium ion binding (33.2%) sugar-phosphatase activity (19.3%) phosphatase activity (14%)" "IPR023214 (25.1%) IPR036412 (25.1%) IPR006379 (25.1%)" "HAD superfamily (25.1%) HAD-like superfamily (25.1%) HAD-superfamily hydrolase, subfamily IIB (25.1%)" YRADVLIEDQLAKYDEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.9%) GO:0015966 (12.1%) GO:0044281 (0.4%)" "GO:0005737 (12.9%) GO:0070062 (12.1%) GO:1990742 (12.1%)" "GO:0004820 (12.9%) GO:0005524 (12.5%) GO:0004081 (12.1%)" "glycyl-tRNA aminoacylation (12.9%) diadenosine tetraphosphate biosynthetic process (12.1%) small molecule metabolic process (0.4%)" "cytoplasm (12.9%) extracellular exosome (12.1%) microvesicle (12.1%)" "glycine-tRNA ligase activity (12.9%) ATP binding (12.5%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.1%)" "IPR027031 (11.4%) IPR045864 (11.4%) IPR002314 (11%)" "Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 (11.4%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.4%) Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11%)" VKDSLSHISELALGGTAVGTGINAPVNYDECVAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.2 (100%) fumarate hydratase (100%) "GO:0006099 (20%) GO:0006106 (20%) GO:0006108 (20%)" GO:0005737 (20%) GO:0004333 (20%) "tricarboxylic acid cycle (20%) fumarate metabolic process (20%) malate metabolic process (20%)" cytoplasm (20%) fumarate hydratase activity (20%) "IPR000362 (14.3%) IPR005677 (14.3%) IPR008948 (14.3%)" "Fumarate lyase family (14.3%) Fumarate hydratase, class II (14.3%) L-Aspartase-like (14.3%)" SGEPYIMHPIAVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.7.6.5 (61.5%) 3.1.7.2 (38.5%)" "GTP diphosphokinase (61.5%) guanosine-3',5'-bis(diphosphate) 3'-diphosphatase (38.5%)" GO:0015969 (35.8%) GO:0005886 (35.8%) "GO:0016301 (12.2%) GO:0016787 (8.1%) GO:0008728 (4.7%)" guanosine tetraphosphate metabolic process (35.8%) plasma membrane (35.8%) "kinase activity (12.2%) hydrolase activity (8.1%) GTP diphosphokinase activity (4.7%)" "IPR003607 (10%) IPR004095 (10%) IPR004811 (10%)" "HD/PDEase domain (10%) TGS (10%) RelA/SpoT family (10%)" EIEIAEHEMPGLMALR root "3.13.2.1 (95.8%) 3.3.1.1 (4.2%)" "adenosylhomocysteinase (95.8%) Transferred entry: 3.13.2.1 (4.2%)" "GO:0033353 (21%) GO:0006730 (20.9%) GO:0071269 (13.2%)" "GO:0005829 (21%) GO:0005737 (0.2%)" "GO:0004013 (20.6%) GO:0016787 (0.5%) GO:0003677 (0.2%)" "S-adenosylmethionine cycle (21%) one-carbon metabolic process (20.9%) L-homocysteine biosynthetic process (13.2%)" "cytosol (21%) cytoplasm (0.2%)" "adenosylhomocysteinase activity (20.6%) hydrolase activity (0.5%) DNA binding (0.2%)" "IPR000043 (20%) IPR042172 (20%) IPR015878 (19.9%)" "Adenosylhomocysteinase-like (20%) Adenosylhomocysteinase-like superfamily (20%) S-adenosyl-L-homocysteine hydrolase, NAD binding domain (19.9%)" ACIVTADMHLTAMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0030145 (25%) GO:0070006 (25%)" proteolysis (25%) cytosol (25%) "manganese ion binding (25%) metalloaminopeptidase activity (25%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" IFEEIIEHGYSVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0007059 (25%) GO:0045881 (25%)" GO:0005694 (25%) GO:0003677 (25%) "chromosome segregation (25%) positive regulation of sporulation resulting in formation of a cellular spore (25%)" chromosome (25%) DNA binding (25%) "IPR003115 (16.7%) IPR004437 (16.7%) IPR036086 (16.7%)" "ParB-like, N-terminal domain (16.7%) ParB/RepB/Spo0J partition protein (16.7%) ParB/Sulfiredoxin superfamily (16.7%)" FLPDKAIDLMDEAAAK root "GO:0034605 (18.8%) GO:0042026 (15%) GO:0006508 (4.9%)" GO:0005737 (18.8%) "GO:0005524 (18.8%) GO:0016887 (18.8%) GO:0008233 (4.9%)" "cellular response to heat (18.8%) protein refolding (15%) proteolysis (4.9%)" cytoplasm (18.8%) "ATP binding (18.8%) ATP hydrolysis activity (18.8%) peptidase activity (4.9%)" "IPR041546 (8.4%) IPR050130 (8.4%) IPR003959 (8.4%)" "ClpA/ClpB, AAA lid domain (8.4%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.4%) ATPase, AAA-type, core (8.4%)" KFEFTPDVFAAIVQFPNADGSIEDYKEFVAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" AFAEQLVNLTVK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) "GO:0022625 (25%) GO:0005840 (0.1%)" "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) "cytosolic large ribosomal subunit (25%) ribosome (0.1%)" "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" CDENGNIDLEDFR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" IIGDNTDKYCQAYFSYDSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (86.4%) 1.2.7.- (9.1%) 1.2.1.51 (4.5%)" "pyruvate synthase (86.4%) With an iron-sulfur protein as acceptor (9.1%) pyruvate dehydrogenase (NADP(+)) (4.5%)" "GO:0006979 (15%) GO:0022900 (15%) GO:0044281 (11%)" "GO:0005506 (15%) GO:0051539 (15%) GO:0030976 (14.2%)" "response to oxidative stress (15%) electron transport chain (15%) small molecule metabolic process (11%)" "iron ion binding (15%) 4 iron, 4 sulfur cluster binding (15%) thiamine pyrophosphate binding (14.2%)" "IPR002869 (7.8%) IPR009014 (7.8%) IPR011895 (7.8%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.8%) Pyruvate-flavodoxin oxidoreductase (7.8%)" GYLSAYFVTDTEKMECVMEHPYILIYDKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (19.1%) GO:0005737 (12.4%) "GO:0005524 (19.1%) GO:0140662 (19.1%) GO:0016853 (18%)" protein refolding (19.1%) cytoplasm (12.4%) "ATP binding (19.1%) ATP-dependent protein folding chaperone (19.1%) isomerase activity (18%)" "IPR001844 (17.8%) IPR002423 (17.8%) IPR027409 (17.3%)" "Chaperonin Cpn60/GroEL (17.8%) Chaperonin Cpn60/GroEL/TCP-1 family (17.8%) GroEL-like apical domain superfamily (17.3%)" ALVEAAAENDEGLMEK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0032790 (25.2%) "GO:0003746 (25.2%) GO:0005525 (25.2%) GO:0003924 (24.3%)" ribosome disassembly (25.2%) "translation elongation factor activity (25.2%) GTP binding (25.2%) GTPase activity (24.3%)" "IPR041095 (7.7%) IPR005517 (7.6%) IPR009000 (7.6%)" "Elongation Factor G, domain II (7.7%) Translation elongation factor EFG/EF2, domain IV (7.6%) Translation protein, beta-barrel domain superfamily (7.6%)" FQQTMILPENVDKDHISAQVENGVLNIELPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" NLVYTPHIYVVDLVIDGKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.8%) "GO:0022625 (24.8%) GO:0005840 (0.6%)" "GO:0003735 (24.8%) GO:0008097 (24.8%)" translation (24.8%) "cytosolic large ribosomal subunit (24.8%) ribosome (0.6%)" "structural constituent of ribosome (24.8%) 5S rRNA binding (24.8%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" AANNATPSKEQSIDDQIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR027823 (100%) Domain of unknown function DUF4468 with TBP-like fold (100%) IQKNPISEADVEIVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (31.9%) GO:0006044 (31.9%)" "GO:0004342 (32.7%) GO:0016853 (3.5%)" "carbohydrate metabolic process (31.9%) N-acetylglucosamine metabolic process (31.9%)" "glucosamine-6-phosphate deaminase activity (32.7%) isomerase activity (3.5%)" "IPR003737 (14.9%) IPR024078 (14.9%) IPR052960 (14.9%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.9%) Putative deacetylase LmbE-like domain superfamily (14.9%) Glucosamine-6-phosphate deaminase-like (14.9%)" AEIIPISALSNFNIDYVKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0000028 (14.3%) "GO:0005829 (14.3%) GO:0005886 (14.3%)" "GO:0003924 (14.3%) GO:0005525 (14.3%) GO:0043024 (14.3%)" ribosomal small subunit assembly (14.3%) "cytosol (14.3%) plasma membrane (14.3%)" "GTPase activity (14.3%) GTP binding (14.3%) ribosomal small subunit binding (14.3%)" "IPR004044 (12.5%) IPR005225 (12.5%) IPR005662 (12.5%)" "K Homology domain, type 2 (12.5%) Small GTP-binding domain (12.5%) GTPase Era-like (12.5%)" SNNTEPTWFPDSQNLAFTSDQAGRPQVYK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0017038 (32.6%) GO:0051301 (32.2%) GO:0015031 (0.2%)" "GO:0042597 (32.8%) GO:0009279 (0.2%) GO:0016020 (0.2%)" "GO:0016787 (0.2%) GO:0019904 (0.2%) GO:0044877 (0.2%)" "protein import (32.6%) cell division (32.2%) protein transport (0.2%)" "periplasmic space (32.8%) cell outer membrane (0.2%) membrane (0.2%)" "hydrolase activity (0.2%) protein domain specific binding (0.2%) protein-containing complex binding (0.2%)" "IPR011042 (25.1%) IPR011659 (25.1%) IPR014167 (24.6%)" "Six-bladed beta-propeller, TolB-like (25.1%) WD40-like beta-propeller (25.1%) Tol-Pal system protein TolB (24.6%)" SNIVGKPMASLMMQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.5.1.5 (50%) 3.5.4.9 (50%)" "methylenetetrahydrofolate dehydrogenase (NADP(+)) (50%) methenyltetrahydrofolate cyclohydrolase (50%)" "GO:0035999 (14.5%) GO:0000105 (14%) GO:0006164 (14%)" GO:0005829 (14.5%) "GO:0004477 (14.5%) GO:0004488 (14.5%)" "tetrahydrofolate interconversion (14.5%) L-histidine biosynthetic process (14%) purine nucleotide biosynthetic process (14%)" cytosol (14.5%) "methenyltetrahydrofolate cyclohydrolase activity (14.5%) methylenetetrahydrofolate dehydrogenase (NADP+) activity (14.5%)" "IPR000672 (16.7%) IPR020630 (16.7%) IPR020631 (16.7%)" "Tetrahydrofolate dehydrogenase/cyclohydrolase (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (16.7%)" LVLEIATDGSIHPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.7%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.7%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011260 (16.7%) IPR011262 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.7%) DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" GEFKGEMGDLTIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005524 (24.6%) GO:0016887 (24.6%) GO:0051082 (24.6%)" "ATP binding (24.6%) ATP hydrolysis activity (24.6%) unfolded protein binding (24.6%)" "IPR001404 (20%) IPR019805 (20%) IPR020568 (20%)" "Heat shock protein Hsp90 family (20%) Heat shock protein Hsp90, conserved site (20%) Ribosomal protein uS5 domain 2-type superfamily (20%)" SAHISANNYEIAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" NKISGTTERPR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR004389 (33.9%) IPR005484 (33.9%) IPR057268 (32.2%)" "Large ribosomal subunit protein uL18, bacteria (33.9%) Large ribosomal subunit protein uL18, bacterial/plantae/animalia (33.9%) Large ribosomal subunit protein uL18 (32.2%)" SRQEGAANEENQNVSR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (32.8%) "GO:0003723 (32.8%) GO:0120159 (32.8%) GO:0016829 (1.7%)" enzyme-directed rRNA pseudouridine synthesis (32.8%) "RNA binding (32.8%) rRNA pseudouridine synthase activity (32.8%) lyase activity (1.7%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" AEGNYEALQALPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20.5%) "GO:0005737 (20.5%) GO:0015935 (20.5%)" "GO:0003735 (20.5%) GO:0019843 (18.2%)" translation (20.5%) "cytoplasm (20.5%) small ribosomal subunit (20.5%)" "structural constituent of ribosome (20.5%) rRNA binding (18.2%)" "IPR001209 (25.7%) IPR018271 (25.7%) IPR043140 (25.7%)" "Small ribosomal subunit protein uS14 (25.7%) Small ribosomal subunit protein uS14, conserved site (25.7%) Small ribosomal subunit protein uS14 superfamily (25.7%)" LLMVLPEKNNLVYLSAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" EFWSNVFIPGNADNLNTELEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (15%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (15%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" GANGFVGHEMILECR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005960 (16.7%) GO:0005829 (16.5%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "glycine cleavage complex (16.7%) cytosol (16.5%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR015422 (14.4%) IPR015424 (14.4%) IPR020581 (14.4%)" "Pyridoxal phosphate-dependent transferase, small domain (14.4%) Pyridoxal phosphate-dependent transferase (14.4%) Glycine cleavage system P protein (14.4%)" HNFYAGPSILSEYTIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20.1%) GO:0008615 (19.6%)" GO:0005737 (20.1%) "GO:0004648 (20.1%) GO:0030170 (20.1%)" "L-serine biosynthetic process (20.1%) pyridoxine biosynthetic process (19.6%)" cytoplasm (20.1%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20.1%) pyridoxal phosphate binding (20.1%)" "IPR000192 (17.2%) IPR015421 (17.2%) IPR015422 (17.2%)" "Aminotransferase class V domain (17.2%) Pyridoxal phosphate-dependent transferase, major domain (17.2%) Pyridoxal phosphate-dependent transferase, small domain (17.2%)" LLQDTLDVVKTESGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.1.20 (100%) diaminopimelate decarboxylase (100%) GO:0009089 (33.3%) "GO:0008836 (33.3%) GO:0030170 (33.3%)" lysine biosynthetic process via diaminopimelate (33.3%) "diaminopimelate decarboxylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000183 (14.3%) IPR002986 (14.3%) IPR009006 (14.3%)" "Ornithine/DAP/Arg decarboxylase (14.3%) Diaminopimelate decarboxylase, LysA (14.3%) Alanine racemase/group IV decarboxylase, C-terminal (14.3%)" KSDVTGSISTAKGEEMLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR012910 (12.9%) IPR023996 (12.9%) IPR023997 (12.9%)" "TonB-dependent receptor, plug domain (12.9%) TonB-dependent outer membrane protein, SusC/RagA (12.9%) TonB-dependent outer membrane protein SusC/RagA, conserved site (12.9%)" LQISFECAAPEVDETPRSDESPR Bacteria Bacteria "3.6.1.- (97.4%) 3.6.1.9 (2.6%)" "In phosphorus-containing anhydrides (97.4%) nucleotide diphosphatase (2.6%)" GO:0009117 (33.2%) GO:0005737 (33.2%) "GO:0047429 (33.2%) GO:0016787 (0.4%)" nucleotide metabolic process (33.2%) cytoplasm (33.2%) "nucleoside triphosphate diphosphatase activity (33.2%) hydrolase activity (0.4%)" "IPR003697 (50%) IPR029001 (50%)" "Nucleoside triphosphate pyrophosphatase Maf-like protein (50%) Inosine triphosphate pyrophosphatase-like (50%)" IITDVHEPSQAQPVADVVDVIQLPAFLAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.5.1.55 (100%) 3-deoxy-8-phosphooctulonate synthase (100%) "GO:0019294 (21.9%) GO:0009103 (10.7%) GO:0046394 (0.7%)" "GO:0005737 (32.4%) GO:0005829 (0.2%) GO:0032991 (0.2%)" "GO:0008676 (32.6%) GO:0016740 (0.9%) GO:0042802 (0.2%)" "keto-3-deoxy-D-manno-octulosonic acid biosynthetic process (21.9%) lipopolysaccharide biosynthetic process (10.7%) carboxylic acid biosynthetic process (0.7%)" "cytoplasm (32.4%) cytosol (0.2%) protein-containing complex (0.2%)" "3-deoxy-8-phosphooctulonate synthase activity (32.6%) transferase activity (0.9%) identical protein binding (0.2%)" "IPR006218 (33.3%) IPR006269 (33.3%) IPR013785 (33.3%)" "DAHP synthetase I/KDSA (33.3%) 3-deoxy-8-phosphooctulonate synthase (33.3%) Aldolase-type TIM barrel (33.3%)" AIAEHTDLPQILYNVPSR root "4.3.3.7 (99.9%) 4.1.3.16 (0.1%)" "4-hydroxy-tetrahydrodipicolinate synthase (99.9%) 4-hydroxy-2-oxoglutarate aldolase (0.1%)" "GO:0009089 (24.9%) GO:0019877 (24.9%) GO:0044281 (0%)" GO:0005829 (24.9%) "GO:0008840 (24.9%) GO:0016829 (0.3%) GO:0008700 (0%)" "lysine biosynthetic process via diaminopimelate (24.9%) diaminopimelate biosynthetic process (24.9%) small molecule metabolic process (0%)" cytosol (24.9%) "4-hydroxy-tetrahydrodipicolinate synthase activity (24.9%) lyase activity (0.3%) (R,S)-4-hydroxy-2-oxoglutarate aldolase activity (0%)" "IPR002220 (20.1%) IPR013785 (20.1%) IPR005263 (20.1%)" "DapA-like (20.1%) Aldolase-type TIM barrel (20.1%) 4-hydroxy-tetrahydrodipicolinate synthase, DapA (20.1%)" AVQAIVEKFFGKAPSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005737 (22.3%) GO:0070013 (3.6%)" "GO:0005524 (25%) GO:0140662 (25%) GO:0051082 (24.1%)" "cytoplasm (22.3%) intracellular organelle lumen (3.6%)" "ATP binding (25%) ATP-dependent protein folding chaperone (25%) unfolded protein binding (24.1%)" "IPR013126 (17%) IPR018181 (17%) IPR029047 (17%)" "Heat shock protein 70 family (17%) Heat shock protein 70, conserved site (17%) Heat shock protein 70kD, peptide-binding domain superfamily (17%)" LVTLAILTYTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006016 (40%) IPR006015 (39.4%) IPR014729 (20%)" "UspA (40%) Universal stress protein A family (39.4%) Rossmann-like alpha/beta/alpha sandwich fold (20%)" LKSYDHNLVDKSAEK Pseudomonadati Bacteria Pseudomonadati GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%) GO:0015935 (0%)" "GO:0003735 (20%) GO:0000049 (19.3%) GO:0003723 (0.7%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%) small ribosomal subunit (0%)" "structural constituent of ribosome (20%) tRNA binding (19.3%) RNA binding (0.7%)" "IPR001848 (25.1%) IPR027486 (25.1%) IPR036838 (25.1%)" "Small ribosomal subunit protein uS10 (25.1%) Small ribosomal subunit protein uS10 domain (25.1%) Small ribosomal subunit protein uS10 domain superfamily (25.1%)" FKMPIITFIDTPGAYPGVGAEER root "2.1.3.15 (94.7%) 6.4.1.2 (5.3%)" "acetyl-CoA carboxytransferase (94.7%) acetyl-CoA carboxylase (5.3%)" "GO:0006633 (16.5%) GO:2001295 (16.4%) GO:0006260 (0%)" "GO:0009317 (16.5%) GO:0005737 (0%) GO:0005829 (0%)" "GO:0003989 (16.5%) GO:0005524 (16.5%) GO:0016743 (16.5%)" "fatty acid biosynthetic process (16.5%) malonyl-CoA biosynthetic process (16.4%) DNA replication (0%)" "acetyl-CoA carboxylase complex (16.5%) cytoplasm (0%) cytosol (0%)" "acetyl-CoA carboxylase activity (16.5%) ATP binding (16.5%) carboxyl- or carbamoyltransferase activity (16.5%)" "IPR001095 (33%) IPR011763 (33%) IPR029045 (33%)" "Acetyl-CoA carboxylase, alpha subunit (33%) Acetyl-coenzyme A carboxyltransferase, C-terminal (33%) ClpP/crotonase-like domain superfamily (33%)" FDNEHIYPGNIIPLMNSEGQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0042026 (32.6%) GO:0005737 (32.6%) "GO:0003755 (32.6%) GO:0016853 (2.2%)" protein refolding (32.6%) cytoplasm (32.6%) "peptidyl-prolyl cis-trans isomerase activity (32.6%) isomerase activity (2.2%)" "IPR001179 (33.3%) IPR046357 (33.3%) IPR048261 (33.3%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) PPIase chaperone SlpA/SlyD-like, insertion domain superfamily (33.3%)" GFIDVFDEEAHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.2%) "GO:0003921 (33.2%) GO:0005524 (33.2%) GO:0008483 (0.5%)" cytosol (33.2%) "GMP synthase activity (33.2%) ATP binding (33.2%) transaminase activity (0.5%)" "IPR001674 (12.8%) IPR014729 (12.8%) IPR025777 (12.8%)" "GMP synthase, C-terminal (12.8%) Rossmann-like alpha/beta/alpha sandwich fold (12.8%) GMP synthetase ATP pyrophosphatase domain (12.8%)" ENVESVHLSDFPVYDESKIDKNLEER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004822 (14.3%)" isoleucyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) isoleucine-tRNA ligase activity (14.3%)" "IPR002300 (12.5%) IPR002301 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class Ia (12.5%) Isoleucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" GLDAALNEAVTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (23.8%) "GO:0005840 (25.4%) GO:1990904 (25.4%)" GO:0003735 (25.4%) translation (23.8%) "ribosome (25.4%) ribonucleoprotein complex (25.4%)" structural constituent of ribosome (25.4%) "IPR026569 (25.4%) IPR034704 (25.4%) IPR037147 (25.4%)" "Large ribosomal subunit protein bL28 (25.4%) Large ribosomal subunit protein bL28/bL31-like superfamily (25.4%) Large ribosomal subunit protein bL28 superfamily (25.4%)" VALVGYTNVGK root GO:0005737 (20.2%) "GO:0005525 (20.2%) GO:0043022 (20.2%) GO:0046872 (20%)" cytoplasm (20.2%) "GTP binding (20.2%) ribosome binding (20.2%) metal ion binding (20%)" "IPR006073 (13.1%) IPR016496 (13.1%) IPR030394 (13.1%)" "GTP binding domain (13.1%) GTPase HflX (13.1%) HflX-type guanine nucleotide-binding (G) domain (13.1%)" SREGTVVDADDLMAEMIATAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.19 (100%) arginine--tRNA ligase (100%) GO:0006420 (25%) GO:0005737 (25%) "GO:0004814 (25%) GO:0005524 (25%)" arginyl-tRNA aminoacylation (25%) cytoplasm (25%) "arginine-tRNA ligase activity (25%) ATP binding (25%)" "IPR001278 (12.5%) IPR001412 (12.5%) IPR005148 (12.5%)" "Arginine-tRNA ligase (12.5%) Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Arginyl tRNA synthetase N-terminal domain (12.5%)" VGDTVLYDKYAGSEVK Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus GO:0051085 (1.7%) GO:0005737 (15.5%) "GO:0005524 (16.6%) GO:0044183 (16.6%) GO:0046872 (16.6%)" obsolete chaperone cofactor-dependent protein refolding (1.7%) cytoplasm (15.5%) "ATP binding (16.6%) protein folding chaperone (16.6%) metal ion binding (16.6%)" "IPR011032 (25.4%) IPR020818 (25.4%) IPR037124 (25.4%)" "GroES-like superfamily (25.4%) GroES chaperonin family (25.4%) GroES chaperonin superfamily (25.4%)" IYRFPVSQSIDELMEACRDVIR root 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0006532 (15.1%) GO:0009098 (15.1%) GO:0009099 (15.1%)" GO:0005829 (15.1%) "GO:0004084 (11%) GO:0052654 (4.8%) GO:0052655 (4.8%)" "aspartate biosynthetic process (15.1%) L-leucine biosynthetic process (15.1%) L-valine biosynthetic process (15.1%)" cytosol (15.1%) "branched-chain-amino-acid transaminase activity (11%) L-leucine-2-oxoglutarate transaminase activity (4.8%) L-valine-2-oxoglutarate transaminase activity (4.8%)" "IPR001544 (12.8%) IPR036038 (12.8%) IPR043131 (12.8%)" "Aminotransferase class IV (12.8%) Aminotransferase-like, PLP-dependent enzymes (12.8%) Branched-chain-amino-acid aminotransferase-like, N-terminal (12.8%)" QAAEELEHAHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.3%) GO:0006879 (14.3%)" GO:0005829 (14.3%) "GO:0004322 (14.3%) GO:0008198 (14.3%) GO:0008199 (14.3%)" "iron ion transport (14.3%) intracellular iron ion homeostasis (14.3%)" cytosol (14.3%) "ferroxidase activity (14.3%) ferrous iron binding (14.3%) ferric iron binding (14.3%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" ILSIDTEGLTAEQIR Bacteria Bacteria GO:0005829 (100%) cytosol (100%) IPR017704 (100%) Putative selenium-binding protein YdfZ (100%) LHDFFDKFGLPVADVQSMKDAVDAAYR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.2.9 (100%) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase (100%) "GO:0008360 (14.4%) GO:0009252 (14.4%) GO:0051301 (14.4%)" GO:0005737 (14.4%) "GO:0005524 (14.4%) GO:0008764 (14.4%)" "regulation of cell shape (14.4%) peptidoglycan biosynthetic process (14.4%) cell division (14.4%)" cytoplasm (14.4%) "ATP binding (14.4%) UDP-N-acetylmuramoylalanine-D-glutamate ligase activity (14.4%)" "IPR004101 (20%) IPR005762 (20%) IPR013221 (20%)" "Mur ligase, C-terminal (20%) UDP-N-acetylmuramoylalanine-D-glutamate ligase MurD (20%) Mur ligase, central (20%)" LREGNSAGKETSAKSEEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.3.1.61 (98.6%) 2.3.1.- (1.4%)" "dihydrolipoyllysine-residue succinyltransferase (98.6%) Transferring groups other than amino-acyl groups (1.4%)" "GO:0006099 (20%) GO:0033512 (19.4%) GO:0006086 (0.1%)" "GO:0005829 (20%) GO:0045252 (19.5%) GO:0005737 (0.2%)" "GO:0004149 (20.2%) GO:0016746 (0.2%) GO:0031405 (0.2%)" "tricarboxylic acid cycle (20%) L-lysine catabolic process to acetyl-CoA via saccharopine (19.4%) pyruvate decarboxylation to acetyl-CoA (0.1%)" "cytosol (20%) oxoglutarate dehydrogenase complex (19.5%) cytoplasm (0.2%)" "dihydrolipoyllysine-residue succinyltransferase activity (20.2%) acyltransferase activity (0.2%) lipoic acid binding (0.2%)" "IPR000089 (11.2%) IPR011053 (11.2%) IPR036625 (11.2%)" "Biotin/lipoyl attachment (11.2%) Single hybrid motif (11.2%) E3-binding domain superfamily (11.2%)" NRWDNFAFIEGEPLEAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR026906 (50%) IPR032675 (50%)" "BspA-type LRR region (50%) Leucine-rich repeat domain superfamily (50%)" WIKDSVAAVDPVWNQVTTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.8.2.3 (100%) sulfide-cytochrome-c reductase (flavocytochrome c) (100%) GO:0070221 (31.3%) "GO:0070224 (31.3%) GO:0071949 (31.3%) GO:0070225 (6.3%)" sulfide oxidation, using sulfide:quinone oxidoreductase (31.3%) "sulfide:quinone oxidoreductase activity (31.3%) FAD binding (31.3%) sulfide dehydrogenase activity (6.3%)" "IPR006311 (25%) IPR015904 (25%) IPR023753 (25%)" "Twin-arginine translocation pathway, signal sequence (25%) Sulphide quinone-reductase (25%) FAD/NAD(P)-binding domain (25%)" SIECVEYPELGMEAIWK root "4.2.1.2 (99.6%) 5.3.2.2 (0.4%)" "fumarate hydratase (99.6%) oxaloacetate tautomerase (0.4%)" "GO:0006099 (20.2%) GO:0006106 (0%)" GO:0005829 (0.1%) "GO:0004333 (20.3%) GO:0046872 (20.2%) GO:0051539 (20.2%)" "tricarboxylic acid cycle (20.2%) fumarate metabolic process (0%)" cytosol (0.1%) "fumarate hydratase activity (20.3%) metal ion binding (20.2%) 4 iron, 4 sulfur cluster binding (20.2%)" "IPR004647 (17.1%) IPR051208 (17.1%) IPR036660 (17%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (17.1%) Class-I Fumarase/Tartrate Dehydratase (17.1%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (17%)" ANPAPPLGPALGSHGVNIMDFCK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0006412 (25%) "GO:0022625 (25%) GO:0005840 (0.2%)" "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) "cytosolic large ribosomal subunit (25%) ribosome (0.2%)" "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (14.3%) IPR006519 (14.3%) IPR020783 (14.3%)" "Ribosomal protein uL11 (14.3%) Large ribosomal subunit protein uL11, bacteria (14.3%) Large ribosomal subunit protein uL11, C-terminal (14.3%)" LLAPYETISEIQLYPTEFEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.2.1.3 (100%) long-chain-fatty-acid--CoA ligase (100%) "GO:0016405 (62.5%) GO:0004467 (37.5%)" "CoA-ligase activity (62.5%) long-chain fatty acid-CoA ligase activity (37.5%)" "IPR000873 (33.3%) IPR020845 (33.3%) IPR042099 (33.3%)" "AMP-dependent synthetase/ligase domain (33.3%) AMP-binding, conserved site (33.3%) ANL, N-terminal domain (33.3%)" RFPLHEMRDDVAFQIINDELYLDGNAR root 4.1.1.15 (100%) glutamate decarboxylase (100%) "GO:0006538 (22.1%) GO:0051454 (10.8%)" "GO:0005829 (22.1%) GO:0016020 (0.1%)" "GO:0004351 (22.2%) GO:0030170 (22.1%) GO:0016829 (0.7%)" "L-glutamate catabolic process (22.1%) intracellular pH elevation (10.8%)" "cytosol (22.1%) membrane (0.1%)" "glutamate decarboxylase activity (22.2%) pyridoxal phosphate binding (22.1%) lyase activity (0.7%)" "IPR010107 (22.7%) IPR015424 (22.6%) IPR002129 (22.2%)" "Glutamate decarboxylase (22.7%) Pyridoxal phosphate-dependent transferase (22.6%) Pyridoxal phosphate-dependent decarboxylase (22.2%)" RGIEGSSLDVPENIVHSGK root "GO:0006974 (0.4%) GO:0042542 (0.4%)" GO:0005829 (48.7%) "GO:0000166 (48.7%) GO:0000049 (0.4%) GO:0005524 (0.4%)" "DNA damage response (0.4%) response to hydrogen peroxide (0.4%)" cytosol (48.7%) "nucleotide binding (48.7%) tRNA binding (0.4%) ATP binding (0.4%)" "IPR007551 (25.3%) IPR035570 (25.3%) IPR036183 (25.3%)" "Nucleotide-binding protein YajQ/Smlt4090-like (25.3%) UPF0234, N-terminal (25.3%) YajQ-like superfamily (25.3%)" AIIYADKTENFATVAGQEAQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 4.1.1.23 (100%) orotidine-5'-phosphate decarboxylase (100%) "GO:0006207 (33.3%) GO:0044205 (33.3%)" GO:0004590 (33.3%) "'de novo' pyrimidine nucleobase biosynthetic process (33.3%) 'de novo' UMP biosynthetic process (33.3%)" orotidine-5'-phosphate decarboxylase activity (33.3%) "IPR001754 (25%) IPR011060 (25%) IPR011995 (25%)" "Orotidine 5'-phosphate decarboxylase domain (25%) Ribulose-phosphate binding barrel (25%) Orotidine 5'-phosphate decarboxylase, type 2 (25%)" SRLDSFMGIGDEK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.5.1.55 (100%) 3-deoxy-8-phosphooctulonate synthase (100%) GO:0009103 (30.6%) GO:0005737 (34.2%) "GO:0008676 (34.7%) GO:0016740 (0.5%)" lipopolysaccharide biosynthetic process (30.6%) cytoplasm (34.2%) "3-deoxy-8-phosphooctulonate synthase activity (34.7%) transferase activity (0.5%)" "IPR006218 (33.3%) IPR006269 (33.3%) IPR013785 (33.3%)" "DAHP synthetase I/KDSA (33.3%) 3-deoxy-8-phosphooctulonate synthase (33.3%) Aldolase-type TIM barrel (33.3%)" QGCLEAYASATGVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.2 (100%) glucokinase (100%) GO:0004340 (100%) glucokinase activity (100%) "IPR000600 (34.1%) IPR043129 (34.1%) IPR049874 (31.8%)" "ROK family (34.1%) ATPase, nucleotide binding domain (34.1%) ROK, conserved site (31.8%)" VGACTLVAADSETVDR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.6.1.- (96.9%) 2.6.1.1 (3.1%)" "Transaminases (96.9%) aspartate transaminase (3.1%)" "GO:0033585 (16.5%) GO:0009094 (0.2%)" "GO:0005829 (16.5%) GO:0005737 (0.2%)" "GO:0004069 (16.5%) GO:0004838 (16.5%) GO:0030170 (16.5%)" "L-phenylalanine biosynthetic process from chorismate via phenylpyruvate (16.5%) L-phenylalanine biosynthetic process (0.2%)" "cytosol (16.5%) cytoplasm (0.2%)" "L-aspartate:2-oxoglutarate aminotransferase activity (16.5%) L-tyrosine-2-oxoglutarate transaminase activity (16.5%) pyridoxal phosphate binding (16.5%)" "IPR000796 (16.7%) IPR004838 (16.7%) IPR004839 (16.7%)" "Aspartate/other aminotransferase (16.7%) Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%)" GGIATNIVMPELEIVAEAR Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 3.4.11.4 (100%) tripeptide aminopeptidase (100%) GO:0006508 (25%) "GO:0008237 (25%) GO:0046872 (25%) GO:0004177 (21.9%)" proteolysis (25%) "metallopeptidase activity (25%) metal ion binding (25%) aminopeptidase activity (21.9%)" "IPR001261 (16.7%) IPR002933 (16.7%) IPR008007 (16.7%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (16.7%) Peptidase M20 (16.7%) Peptidase M42 (16.7%)" TNFAETVKVEYNPQEVPLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "1.8.4.11 (50%) 1.8.4.12 (50%)" "peptide-methionine (S)-S-oxide reductase (50%) peptide-methionine (R)-S-oxide reductase (50%)" "GO:0006979 (17.7%) GO:0030091 (17.7%)" GO:0005737 (17.7%) "GO:0008113 (17.7%) GO:0033743 (17.7%) GO:0033744 (11.5%)" "response to oxidative stress (17.7%) protein repair (17.7%)" cytoplasm (17.7%) "peptide-methionine (S)-S-oxide reductase activity (17.7%) peptide-methionine (R)-S-oxide reductase activity (17.7%) L-methionine (S)-S-oxide reductase activity (11.5%)" "IPR002569 (20%) IPR002579 (20%) IPR011057 (20%)" "Peptide methionine sulphoxide reductase MsrA domain (20%) Peptide methionine sulphoxide reductase MrsB domain (20%) Mss4-like superfamily (20%)" WDAIGAEYVVESTGLFLTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.1.- (94.1%) 1.2.1.12 (5.9%)" "With NAD(+) or NADP(+) as acceptor (94.1%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (5.9%)" GO:0006006 (25%) "GO:0050661 (25%) GO:0051287 (25%) GO:0004365 (18.4%)" glucose metabolic process (25%) "NADP binding (25%) NAD binding (25%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (18.4%)" "IPR006424 (17%) IPR020828 (17%) IPR020829 (17%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (17%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17%)" MVFTYQGDGDLAAIGTAETIHAANR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.3 (41.7%) 1.2.7.11 (25%) 1.-.-.- (8.3%)" "2-oxoglutarate synthase (41.7%) 2-oxoacid oxidoreductase (ferredoxin) (25%) Oxidoreductases (8.3%)" GO:0044281 (31.4%) "GO:0030976 (34.3%) GO:0016625 (30.5%) GO:0047553 (1.9%)" small molecule metabolic process (31.4%) "thiamine pyrophosphate binding (34.3%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (30.5%) 2-oxoglutarate synthase activity (1.9%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" GNLVAVISNGTAVLGLGDIGALSGKPVMEGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (16.8%) "GO:0051287 (17.6%) GO:0046872 (17.3%) GO:0016746 (17.1%)" malate metabolic process (16.8%) "NAD binding (17.6%) metal ion binding (17.3%) acyltransferase activity (17.1%)" "IPR012301 (9.2%) IPR037062 (9.2%) IPR046346 (9.2%)" "Malic enzyme, N-terminal domain (9.2%) Malic enzyme, N-terminal domain superfamily (9.2%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (9.2%)" SVDPSVAEEANK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (51%) IPR019734 (49%)" "Tetratricopeptide-like helical domain superfamily (51%) Tetratricopeptide repeat (49%)" TQSFSKIEDYVEAVSSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (66.7%) GO:0004340 (33.3%)" "kinase activity (66.7%) glucokinase activity (33.3%)" "IPR000600 (34.1%) IPR049874 (34.1%) IPR043129 (31.7%)" "ROK family (34.1%) ROK, conserved site (34.1%) ATPase, nucleotide binding domain (31.7%)" ITPEGLSETQESATQMVNEIHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR025150 (46.7%) IPR053850 (46.7%) IPR017853 (6.7%)" "Glycoside hydrolase 123, catalytic domain (46.7%) Glycoside hydrolase 123, N-terminal domain (46.7%) Glycoside hydrolase superfamily (6.7%)" VTLTTLSNYDAVLEEAVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25%) GO:0044205 (25%)" "GO:0000287 (25%) GO:0004588 (25%)" "pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" "magnesium ion binding (25%) orotate phosphoribosyltransferase activity (25%)" "IPR000836 (25%) IPR004467 (25%) IPR023031 (25%)" "Phosphoribosyltransferase domain (25%) Orotate phosphoribosyl transferase domain (25%) Orotate phosphoribosyltransferase (25%)" EAASHPDTVVLAVSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" HVAENNTPDVKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (25%) GO:0016052 (25%)" GO:0005737 (25%) GO:0004139 (25%) "deoxyribonucleotide catabolic process (25%) carbohydrate catabolic process (25%)" cytoplasm (25%) deoxyribose-phosphate aldolase activity (25%) "IPR013785 (34.5%) IPR002915 (32.8%) IPR011343 (32.8%)" "Aldolase-type TIM barrel (34.5%) DeoC/FbaB/LacD aldolase (32.8%) Deoxyribose-phosphate aldolase (32.8%)" GFGFVELSDDELAKKAIEELNQASYDGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003723 (100%) RNA binding (100%) "IPR000504 (20%) IPR012677 (20%) IPR035979 (20%)" "RNA recognition motif domain (20%) Nucleotide-binding alpha-beta plait domain superfamily (20%) RNA-binding domain superfamily (20%)" YKQHVNELYSTDEYKQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.2%) GO:0009090 (17.2%) GO:0009088 (14%)" GO:0005829 (17.2%) "GO:0004072 (17.2%) GO:0005524 (17.2%)" "lysine biosynthetic process via diaminopimelate (17.2%) homoserine biosynthetic process (17.2%) threonine biosynthetic process (14%)" cytosol (17.2%) "aspartate kinase activity (17.2%) ATP binding (17.2%)" "IPR001048 (12.6%) IPR001341 (12.6%) IPR005260 (12.6%)" "Aspartate/glutamate/uridylate kinase (12.6%) Aspartate kinase (12.6%) Aspartate kinase, monofunctional class (12.6%)" ALQQAVEGAVNQMWTITALQLHPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (12.5%) GO:0005737 (1.8%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (12.5%) cytoplasm (1.8%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" FEAYGWHVIR root 2.2.1.1 (100%) transketolase (100%) "GO:0009052 (23.2%) GO:0006098 (1.8%) GO:0019253 (0.1%)" "GO:0005829 (24.9%) GO:0016020 (0.2%)" "GO:0004802 (24.9%) GO:0046872 (24.5%) GO:0016740 (0.2%)" "pentose-phosphate shunt, non-oxidative branch (23.2%) pentose-phosphate shunt (1.8%) reductive pentose-phosphate cycle (0.1%)" "cytosol (24.9%) membrane (0.2%)" "transketolase activity (24.9%) metal ion binding (24.5%) transferase activity (0.2%)" "IPR005474 (11.5%) IPR033247 (11.5%) IPR029061 (11.4%)" "Transketolase, N-terminal (11.5%) Transketolase family (11.5%) Thiamin diphosphate-binding fold (11.4%)" VKDWTDDQAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.8%) "GO:0005829 (16.8%) GO:0015935 (16.8%) GO:0005840 (0.1%)" "GO:0003735 (16.8%) GO:0019843 (16.7%) GO:0000049 (15.7%)" translation (16.8%) "cytosol (16.8%) small ribosomal subunit (16.8%) ribosome (0.1%)" "structural constituent of ribosome (16.8%) rRNA binding (16.7%) tRNA binding (15.7%)" "IPR001892 (20.2%) IPR010979 (20.2%) IPR027437 (20.2%)" "Small ribosomal subunit protein uS13 (20.2%) Small ribosomal subunit protein uS13-like, H2TH (20.2%) Small ribosomal subunit protein uS13, C-terminal (20.2%)" AEAAHNLGVDNLPPCSITMGVATIMAAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (33.3%) GO:0006044 (33.3%)" GO:0004342 (33.3%) "carbohydrate metabolic process (33.3%) N-acetylglucosamine metabolic process (33.3%)" glucosamine-6-phosphate deaminase activity (33.3%) "IPR003737 (14.9%) IPR004547 (14.9%) IPR006148 (14.9%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.9%) Glucosamine-6-phosphate isomerase (14.9%) Glucosamine/galactosamine-6-phosphate isomerase (14.9%)" AGINPAHVDSEDHMESNMAKGWITAEDVAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (47.4%) GO:0003746 (52.6%) cytoplasm (47.4%) translation elongation factor activity (52.6%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" DLENAAILYDEIDRNKLFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" NTAPCIAWASYHIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.13 (100%) mannose-1-phosphate guanylyltransferase (100%) GO:0009298 (31.4%) "GO:0004475 (31.4%) GO:0005525 (30.8%) GO:0016853 (3.8%)" GDP-mannose biosynthetic process (31.4%) "mannose-1-phosphate guanylyltransferase (GTP) activity (31.4%) GTP binding (30.8%) isomerase activity (3.8%)" "IPR005835 (25.1%) IPR029044 (25.1%) IPR051161 (25.1%)" "Nucleotidyl transferase domain (25.1%) Nucleotide-diphospho-sugar transferases (25.1%) Mannose-6-phosphate isomerase type 2 (25.1%)" LSILDETDSGLDIDALR root "3.6.3.- (50%) 3.6.3.30 (50%)" "Acting on acid anhydrides; catalyzing transmembrane movement of substances (50%) Transferred entry: 7.2.2.7 (50%)" GO:0016226 (0.1%) "GO:0005737 (4.4%) GO:0009507 (3%) GO:0009536 (1.3%)" "GO:0005524 (45.6%) GO:0016887 (45.4%)" iron-sulfur cluster assembly (0.1%) "cytoplasm (4.4%) chloroplast (3%) plastid (1.3%)" "ATP binding (45.6%) ATP hydrolysis activity (45.4%)" "IPR010230 (24.2%) IPR027417 (24.1%) IPR003439 (24%)" "FeS cluster assembly SUF system, ATPase SufC (24.2%) P-loop containing nucleoside triphosphate hydrolase (24.1%) ABC transporter-like, ATP-binding domain (24%)" AGFDFYAGAGFLKPTTTYDKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (51.2%) GO:0046872 (48.8%)" "alkaline phosphatase activity (51.2%) metal ion binding (48.8%)" "IPR001952 (33.3%) IPR017850 (33.3%) IPR018299 (33.3%)" "Alkaline phosphatase (33.3%) Alkaline-phosphatase-like, core domain superfamily (33.3%) Alkaline phosphatase, active site (33.3%)" DLMVDRYAYDK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.3.5.1 (33.3%) 1.3.5.4 (33.3%) 1.3.99.1 (33.3%)" "succinate dehydrogenase (33.3%) Transferred entry: 1.3.5.1 (33.3%) Deleted entry (33.3%)" "GO:0009060 (24.7%) GO:0022904 (24.7%)" "GO:0009055 (24.7%) GO:0051537 (24.7%) GO:0016491 (1.4%)" "aerobic respiration (24.7%) respiratory electron transport chain (24.7%)" "electron transfer activity (24.7%) 2 iron, 2 sulfur cluster binding (24.7%) oxidoreductase activity (1.4%)" "IPR006058 (14.3%) IPR009051 (14.3%) IPR012675 (14.3%)" "2Fe-2S ferredoxin, iron-sulphur binding site (14.3%) Alpha-helical ferredoxin (14.3%) Beta-grasp domain superfamily (14.3%)" AAVDAGYADHDRQIGQTGVTVRPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) GO:0033539 (32.8%) "GO:0009055 (32.8%) GO:0050660 (32.8%) GO:0016491 (1.5%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (32.8%) "electron transfer activity (32.8%) flavin adenine dinucleotide binding (32.8%) oxidoreductase activity (1.5%)" "IPR001308 (16.9%) IPR014731 (16.9%) IPR029035 (16.9%)" "Electron transfer flavoprotein alpha subunit/FixB (16.9%) Electron transfer flavoprotein, alpha subunit, C-terminal (16.9%) DHS-like NAD/FAD-binding domain superfamily (16.9%)" DLGVNPDKEVEK SIVLHMIDEGWKEHLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (1.4%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (1.4%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" MAEENKWTDNAEPTEDSSDYHVTTSQHAR root "GO:0006413 (0.1%) GO:0009409 (0.1%) GO:0061077 (0.1%)" "GO:0005829 (19.9%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0003743 (22.1%) GO:0005525 (19.9%) GO:0003924 (19.2%)" "translational initiation (0.1%) response to cold (0.1%) obsolete chaperone-mediated protein folding (0.1%)" "cytosol (19.9%) cytoplasm (0.1%) membrane (0.1%)" "translation initiation factor activity (22.1%) GTP binding (19.9%) GTPase activity (19.2%)" "IPR006847 (7.7%) IPR015760 (7.5%) IPR027417 (7.5%)" "Translation initiation factor IF-2, N-terminal (7.7%) Translation initiation factor IF- 2 (7.5%) P-loop containing nucleoside triphosphate hydrolase (7.5%)" VIGVGGGGGNAVNHMYR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0000917 (14.3%) GO:0043093 (14%) GO:0051258 (14%)" "GO:0005737 (14.4%) GO:0032153 (14.4%)" "GO:0003924 (14.4%) GO:0005525 (14.4%)" "division septum assembly (14.3%) FtsZ-dependent cytokinesis (14%) protein polymerization (14%)" "cytoplasm (14.4%) cell division site (14.4%)" "GTPase activity (14.4%) GTP binding (14.4%)" "IPR003008 (11.3%) IPR045061 (11.3%) IPR000158 (11.2%)" "Tubulin/FtsZ, GTPase domain (11.3%) Tubulin-like protein FtsZ/CetZ (11.3%) Cell division protein FtsZ (11.2%)" KADEIQIYK root "6.3.1.2 (99.9%) 5.4.99.5 (0.1%)" "glutamine synthetase (99.9%) chorismate mutase (0.1%)" "GO:0006542 (14.5%) GO:0019740 (14.5%) GO:0009314 (0%)" "GO:0005737 (14.5%) GO:0016020 (14.4%) GO:0005829 (0%)" "GO:0004356 (14.5%) GO:0005524 (13.7%) GO:0046872 (13.7%)" "glutamine biosynthetic process (14.5%) nitrogen utilization (14.5%) response to radiation (0%)" "cytoplasm (14.5%) membrane (14.4%) cytosol (0%)" "glutamine synthetase activity (14.5%) ATP binding (13.7%) metal ion binding (13.7%)" "IPR008146 (12.9%) IPR014746 (12.9%) IPR008147 (12.6%)" "Glutamine synthetase, catalytic domain (12.9%) Glutamine synthetase/guanido kinase, catalytic domain (12.9%) Glutamine synthetase, N-terminal domain (12.6%)" AAIQQEVTDYTNQLATANGDYTTFIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR027304 (33.3%) IPR046357 (33.3%) IPR052029 (33.3%)" "Trigger factor/SurA domain superfamily (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) Periplasmic chaperone PpiD (33.3%)" MNPGQFYALPQSPQTLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.12 (100%) aspartate--tRNA ligase (100%) "GO:0006422 (19.9%) GO:0006430 (0.3%)" GO:0005737 (19.8%) "GO:0004815 (19.9%) GO:0005524 (19.9%) GO:0003676 (19.8%)" "aspartyl-tRNA aminoacylation (19.9%) lysyl-tRNA aminoacylation (0.3%)" cytoplasm (19.8%) "aspartate-tRNA ligase activity (19.9%) ATP binding (19.9%) nucleic acid binding (19.8%)" "IPR004364 (9.2%) IPR006195 (9.2%) IPR004524 (9.1%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (9.2%) Aminoacyl-tRNA synthetase, class II (9.2%) Aspartate-tRNA ligase, type 1 (9.1%)" FLLHPLLWCFASPAADHAR Escherichia coli Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli 3.4.21.92 (100%) endopeptidase Clp (100%) GO:0006508 (50%) "GO:0004252 (25%) GO:0008233 (25%)" proteolysis (50%) "serine-type endopeptidase activity (25%) peptidase activity (25%)" "IPR023562 (50%) IPR029045 (50%)" "Clp protease proteolytic subunit /Translocation-enhancing protein TepA (50%) ClpP/crotonase-like domain superfamily (50%)" IAALTGAGIKR root 2.5.1.15 (100%) dihydropteroate synthase (100%) "GO:0046654 (20.4%) GO:0046656 (18.6%) GO:0042558 (0.7%)" "GO:0005829 (20.4%) GO:0016020 (0.1%)" "GO:0004156 (20.4%) GO:0046872 (18.6%) GO:0016740 (0.7%)" "tetrahydrofolate biosynthetic process (20.4%) folic acid biosynthetic process (18.6%) pteridine-containing compound metabolic process (0.7%)" "cytosol (20.4%) membrane (0.1%)" "dihydropteroate synthase activity (20.4%) metal ion binding (18.6%) transferase activity (0.7%)" "IPR011005 (25.9%) IPR000489 (25.8%) IPR045031 (25%)" "Dihydropteroate synthase-like superfamily (25.9%) Pterin-binding domain (25.8%) Dihydropteroate synthase-like (25%)" KAGINPSHVDSEAHMESNMDKGWITAEDVAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" QLYGESEGKDNK Bacteria Bacteria 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (19.8%) IPR018189 (19.8%) IPR046348 (19.8%)" "Phosphoglucose isomerase (PGI) (19.8%) Phosphoglucose isomerase, conserved site (19.8%) SIS domain superfamily (19.8%)" AYSEAVKGDVLEMNIR root 1.-.-.- (100%) Oxidoreductases (100%) GO:0010447 (0.5%) GO:0005829 (47.7%) "GO:0004497 (39.1%) GO:0016491 (12.2%) GO:0042803 (0.5%)" response to acidic pH (0.5%) cytosol (47.7%) "monooxygenase activity (39.1%) oxidoreductase activity (12.2%) protein homodimerization activity (0.5%)" "IPR011008 (34.2%) IPR007138 (33.6%) IPR050744 (32.2%)" "Dimeric alpha-beta barrel (34.2%) Antibiotic biosynthesis monooxygenase domain (33.6%) AI-2 Signaling Cycle Isomerase LsrG (32.2%)" NIDKDTMISVLEDSFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006353 (18.6%) GO:0031564 (18.6%)" GO:0005829 (18.6%) "GO:0003700 (18.6%) GO:0003723 (18.6%) GO:0000166 (6.2%)" "DNA-templated transcription termination (18.6%) transcription antitermination (18.6%)" cytosol (18.6%) "DNA-binding transcription factor activity (18.6%) RNA binding (18.6%) nucleotide binding (6.2%)" "IPR009019 (11.6%) IPR010213 (11.6%) IPR012340 (11.6%)" "K homology domain superfamily, prokaryotic type (11.6%) Transcription factor NusA (11.6%) Nucleic acid-binding, OB-fold (11.6%)" LRPLIESFGGVEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (71.4%) GO:0004340 (28.6%)" "kinase activity (71.4%) glucokinase activity (28.6%)" "IPR000600 (34%) IPR049874 (34%) IPR043129 (31.9%)" "ROK family (34%) ROK, conserved site (34%) ATPase, nucleotide binding domain (31.9%)" FANDLEDYGKVEQLPVLEGKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20%) "GO:0005829 (20%) GO:0016020 (20%)" "GO:0003743 (20%) GO:0043022 (20%)" ribosome disassembly (20%) "cytosol (20%) membrane (20%)" "translation initiation factor activity (20%) ribosome binding (20%)" "IPR001288 (20%) IPR019814 (20%) IPR019815 (20%)" "Translation initiation factor 3 (20%) Translation initiation factor 3, N-terminal (20%) Translation initiation factor 3, C-terminal (20%)" VNRPNAMIKIPATLEGLPAITATLAK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (25%)" GO:0005737 (25%) GO:0004801 (25%) "carbohydrate metabolic process (25%) pentose-phosphate shunt (25%)" cytoplasm (25%) transaldolase activity (25%) "IPR001585 (25%) IPR004732 (25%) IPR013785 (25%)" "Transaldolase/Fructose-6-phosphate aldolase (25%) Transaldolase type 2 (25%) Aldolase-type TIM barrel (25%)" REEESAAAAEVEER Bacteria Bacteria "GO:0045892 (0.1%) GO:0006355 (0%) GO:0006417 (0%)" "GO:0005829 (11%) GO:0032993 (11%) GO:0009295 (11%)" "GO:0046983 (11%) GO:0000976 (11%) GO:0001217 (11%)" "negative regulation of DNA-templated transcription (0.1%) regulation of DNA-templated transcription (0%) regulation of translation (0%)" "cytosol (11%) protein-DNA complex (11%) nucleoid (11%)" "protein dimerization activity (11%) transcription cis-regulatory region binding (11%) DNA-binding transcription repressor activity (11%)" "IPR027454 (20.2%) IPR054180 (20.2%) IPR001801 (20%)" "Histone-like protein H-NS, N-terminal (20.2%) DNA-binding protein H-NS-like, N-terminal domain (20.2%) DNA-binding protein H-NS-like (20%)" GQYSPTSPR root "1.2.7.3 (83.3%) 1.2.-.- (11.1%) 2.7.7.6 (5.6%)" "2-oxoglutarate synthase (83.3%) Acting on the aldehyde or oxo group of donors (11.1%) DNA-directed RNA polymerase (5.6%)" "GO:0044281 (30.6%) GO:0006366 (0.2%) GO:0006367 (0.2%)" GO:0005665 (0.3%) "GO:0030976 (33.7%) GO:0016625 (28.7%) GO:0047553 (5%)" "small molecule metabolic process (30.6%) transcription by RNA polymerase II (0.2%) transcription initiation at RNA polymerase II promoter (0.2%)" RNA polymerase II, core complex (0.3%) "thiamine pyrophosphate binding (33.7%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (28.7%) 2-oxoglutarate synthase activity (5%)" "IPR011766 (31.8%) IPR051457 (31.8%) IPR029061 (31.6%)" "Thiamine pyrophosphate enzyme, TPP-binding (31.8%) 2-oxoacid:ferredoxin oxidoreductase (31.8%) Thiamin diphosphate-binding fold (31.6%)" NTPSQEQMPDKGRR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "1.1.1.18 (66.7%) 1.1.1.292 (33.3%)" "inositol 2-dehydrogenase (66.7%) 1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming) (33.3%)" "GO:0000166 (71.4%) GO:0050112 (14.3%) GO:0016491 (7.1%)" "nucleotide binding (71.4%) inositol 2-dehydrogenase (NAD+) activity (14.3%) oxidoreductase activity (7.1%)" "IPR000683 (25%) IPR004104 (25%) IPR036291 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Gfo/Idh/MocA-like oxidoreductase, C-terminal (25%) NAD(P)-binding domain superfamily (25%)" KQANLTPLLAILLHK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.4.2.18 (100%) anthranilate phosphoribosyltransferase (100%) GO:0000162 (26.1%) GO:0005829 (26.1%) "GO:0004048 (26.1%) GO:0003677 (21.5%) GO:0016757 (0.2%)" L-tryptophan biosynthetic process (26.1%) cytosol (26.1%) "anthranilate phosphoribosyltransferase activity (26.1%) DNA binding (21.5%) glycosyltransferase activity (0.2%)" "IPR035902 (25.1%) IPR005940 (25%) IPR017459 (24.9%)" "Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily (25.1%) Anthranilate phosphoribosyl transferase (25%) Glycosyl transferase family 3, N-terminal domain (24.9%)" GMNRPVNYER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.2%) IPR006101 (7.2%) IPR006103 (7.2%)" "Beta galactosidase small chain/ domain 5 (7.2%) Glycoside hydrolase, family 2 (7.2%) Glycoside hydrolase family 2, catalytic domain (7.2%)" ERIEMLLDKGTFNELDKFVVHR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (22.2%) GO:0009317 (22.2%) "GO:0003989 (22.2%) GO:0004658 (22.2%) GO:0016740 (11.1%)" carbon fixation (22.2%) acetyl-CoA carboxylase complex (22.2%) "acetyl-CoA carboxylase activity (22.2%) propionyl-CoA carboxylase activity (22.2%) transferase activity (11.1%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" LKVDAGGGVDKFGKPIYLNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (25%) IPR006665 (25%) IPR036737 (25%)" "Outer membrane protein, bacterial (25%) OmpA-like domain (25%) OmpA-like domain superfamily (25%)" LTNTYETVSGTAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" VTDEDLVVEIPR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0140647 (20%) GO:0022900 (0.2%) GO:0016226 (0.1%)" GO:0005829 (19.9%) "GO:0009055 (20%) GO:0051537 (20%) GO:0046872 (19.2%)" "P450-containing electron transport chain (20%) electron transport chain (0.2%) iron-sulfur cluster assembly (0.1%)" cytosol (19.9%) "electron transfer activity (20%) 2 iron, 2 sulfur cluster binding (20%) metal ion binding (19.2%)" "IPR012675 (16.8%) IPR036010 (16.8%) IPR001041 (16.6%)" "Beta-grasp domain superfamily (16.8%) 2Fe-2S ferredoxin-like superfamily (16.8%) 2Fe-2S ferredoxin-type iron-sulfur binding domain (16.6%)" WLAQGTIYPDCIESLSITGTVIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0006177 (0.2%) GO:0005829 (33.2%) "GO:0003921 (33.2%) GO:0005524 (33.2%) GO:0016740 (0.2%)" GMP biosynthetic process (0.2%) cytosol (33.2%) "GMP synthase activity (33.2%) ATP binding (33.2%) transferase activity (0.2%)" "IPR001674 (12.7%) IPR014729 (12.7%) IPR025777 (12.7%)" "GMP synthase, C-terminal (12.7%) Rossmann-like alpha/beta/alpha sandwich fold (12.7%) GMP synthetase ATP pyrophosphatase domain (12.7%)" SKFGDVENPLLVSVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25.2%) GO:0016301 (25.2%) GO:0050242 (25.2%)" "ATP binding (25.2%) kinase activity (25.2%) pyruvate, phosphate dikinase activity (25.2%)" "IPR002192 (10.2%) IPR010121 (10.2%) IPR013815 (10.1%)" "Pyruvate phosphate dikinase, AMP/ATP-binding (10.2%) Pyruvate, phosphate dikinase (10.2%) ATP-grasp fold, subdomain 1 (10.1%)" ERFTVLISPHVNKDAR root "GO:0006412 (19.9%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0005840 (20.1%) GO:1990904 (19.8%) GO:0015935 (0.1%)" "GO:0003735 (19.9%) GO:0000049 (19.7%) GO:0003723 (0.2%)" "translation (19.9%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (20.1%) ribonucleoprotein complex (19.8%) small ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) tRNA binding (19.7%) RNA binding (0.2%)" "IPR001848 (25%) IPR027486 (25%) IPR036838 (25%)" "Small ribosomal subunit protein uS10 (25%) Small ribosomal subunit protein uS10 domain (25%) Small ribosomal subunit protein uS10 domain superfamily (25%)" TLAQEVLGTTK root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.6%) GO:0006418 (0.1%) GO:0034605 (0.1%)" "GO:0005829 (14.6%) GO:0005694 (0.1%) GO:0005737 (0.1%)" "GO:0000049 (14.6%) GO:0004824 (14.6%) GO:0005524 (14.6%)" "lysyl-tRNA aminoacylation (14.6%) tRNA aminoacylation for protein translation (0.1%) cellular response to heat (0.1%)" "cytosol (14.6%) chromosome (0.1%) cytoplasm (0.1%)" "tRNA binding (14.6%) lysine-tRNA ligase activity (14.6%) ATP binding (14.6%)" "IPR004364 (11.8%) IPR045864 (11.8%) IPR006195 (11.7%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (11.8%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.8%) Aminoacyl-tRNA synthetase, class II (11.7%)" DGAMRVDGNYGAAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" GO:0005737 (16.7%) "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16.7%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" cytoplasm (16.7%) "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16.7%)" "IPR002226 (12.5%) IPR010582 (12.5%) IPR011614 (12.5%)" "Catalase haem-binding site (12.5%) Catalase immune-responsive domain (12.5%) Catalase core domain (12.5%)" IENKTYGICR Bacteroidota Bacteria Pseudomonadati Bacteroidota "6.1.1.5 (66.7%) 5.3.1.9 (33.3%)" "isoleucine--tRNA ligase (66.7%) glucose-6-phosphate isomerase (33.3%)" "GO:0006334 (0.4%) GO:0006355 (0.1%)" GO:0000786 (0.4%) "GO:0008270 (98.1%) GO:0003677 (0.4%) GO:0030527 (0.4%)" "nucleosome assembly (0.4%) regulation of DNA-templated transcription (0.1%)" nucleosome (0.4%) "zinc ion binding (98.1%) DNA binding (0.4%) structural constituent of chromatin (0.4%)" "IPR000962 (57.1%) IPR037187 (42.7%) IPR005819 (0.2%)" "Zinc finger, DksA/TraR C4-type (57.1%) DksA, N-terminal domain superfamily (42.7%) Linker histone H1/H5 (0.2%)" IDGSNTTFLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0044205 (16.2%) GO:0006221 (0.7%)" "GO:0016491 (16.9%) GO:0050660 (16.9%) GO:0051537 (16.9%)" "'de novo' UMP biosynthetic process (16.2%) pyrimidine nucleotide biosynthetic process (0.7%)" "oxidoreductase activity (16.9%) flavin adenine dinucleotide binding (16.9%) 2 iron, 2 sulfur cluster binding (16.9%)" "IPR001433 (11.2%) IPR012165 (11.2%) IPR017927 (11.2%)" "Oxidoreductase FAD/NAD(P)-binding (11.2%) Cytochrome-c3 hydrogenase, gamma subunit (11.2%) FAD-binding domain, ferredoxin reductase-type (11.2%)" KLAYEINKYNEGLYHIVNLSAEDDKAINEFDR Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus GO:0006412 (16.5%) "GO:0005840 (17.7%) GO:0005737 (16.5%) GO:1990904 (16.5%)" "GO:0003735 (16.5%) GO:0070181 (16.5%)" translation (16.5%) "ribosome (17.7%) cytoplasm (16.5%) ribonucleoprotein complex (16.5%)" "structural constituent of ribosome (16.5%) small ribosomal subunit rRNA binding (16.5%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" TDVYENLHAAGVVDPAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.2%) GO:0009408 (0.2%) GO:0051085 (0.2%)" "GO:0005737 (15.7%) GO:1990220 (0.2%)" "GO:0005524 (17.2%) GO:0140662 (17.2%) GO:0016853 (16.1%)" "protein refolding (17.2%) response to heat (0.2%) obsolete chaperone cofactor-dependent protein refolding (0.2%)" "cytoplasm (15.7%) GroEL-GroES complex (0.2%)" "ATP binding (17.2%) ATP-dependent protein folding chaperone (17.2%) isomerase activity (16.1%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR027413 (16.8%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like equatorial domain superfamily (16.8%)" FDAEMIKEGNTVPMMDSNGNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0042026 (33.3%) GO:0005737 (33.3%) GO:0003755 (33.3%) protein refolding (33.3%) cytoplasm (33.3%) peptidyl-prolyl cis-trans isomerase activity (33.3%) "IPR001179 (46.2%) IPR046357 (46.2%) IPR048261 (7.7%)" "FKBP-type peptidyl-prolyl cis-trans isomerase domain (46.2%) Peptidyl-prolyl cis-trans isomerase domain superfamily (46.2%) PPIase chaperone SlpA/SlyD-like, insertion domain superfamily (7.7%)" MLENEDKTELIEAFYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.2.2 (83.3%) 5.4.2.- (16.7%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (83.3%) Phosphotransferases (phosphomutases) (16.7%)" "GO:0005975 (23.8%) GO:0006166 (23.8%)" "GO:0000287 (23.8%) GO:0008973 (23.8%) GO:0004614 (4.8%)" "carbohydrate metabolic process (23.8%) purine ribonucleoside salvage (23.8%)" "magnesium ion binding (23.8%) phosphopentomutase activity (23.8%) phosphoglucomutase activity (4.8%)" "IPR005841 (12.6%) IPR005844 (12.6%) IPR005845 (12.6%)" "Alpha-D-phosphohexomutase superfamily (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.6%)" FLPTETGEPPLGHATK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.4 (100%) leucine--tRNA ligase (100%) GO:0006429 (20%) "GO:0005829 (20%) GO:0005739 (0.1%)" "GO:0004823 (20%) GO:0005524 (20%) GO:0002161 (19.9%)" leucyl-tRNA aminoacylation (20%) "cytosol (20%) mitochondrion (0.1%)" "leucine-tRNA ligase activity (20%) ATP binding (20%) aminoacyl-tRNA deacylase activity (19.9%)" "IPR002302 (12.6%) IPR014729 (12.6%) IPR001412 (12.5%)" "Leucine-tRNA ligase (12.6%) Rossmann-like alpha/beta/alpha sandwich fold (12.6%) Aminoacyl-tRNA synthetase, class I, conserved site (12.5%)" LDQLAEIVKPQR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 3.6.1.3 (100%) Deleted entry (100%) GO:0006979 (0%) GO:0005737 (20.2%) "GO:0005525 (20.3%) GO:0016887 (20.3%) GO:0005524 (19.8%)" response to oxidative stress (0%) cytoplasm (20.2%) "GTP binding (20.3%) ATP hydrolysis activity (20.3%) ATP binding (19.8%)" "IPR006073 (10.2%) IPR027417 (10.2%) IPR031167 (10.2%)" "GTP binding domain (10.2%) P-loop containing nucleoside triphosphate hydrolase (10.2%) OBG-type guanine nucleotide-binding (G) domain (10.2%)" NIACLTIAPTGTTSLMTQTTSGIEPVFLPVYKR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (19.8%) GO:0009263 (16%)" "GO:0004748 (21.7%) GO:0031419 (21.7%) GO:0005524 (16%)" "DNA biosynthetic process (19.8%) deoxyribonucleotide biosynthetic process (16%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (21.7%) cobalamin binding (21.7%) ATP binding (16%)" "IPR000788 (27.1%) IPR050862 (27.1%) IPR013344 (25.9%)" "Ribonucleotide reductase large subunit, C-terminal (27.1%) Ribonucleoside diphosphate reductase class-2 (27.1%) Ribonucleotide reductase, adenosylcobalamin-dependent (25.9%)" VATYDLKPEMSAFEVKDK Bacteria Bacteria 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20.1%) IPR006124 (20.1%) IPR017850 (20.1%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.1%) Metalloenzyme (20.1%) Alkaline-phosphatase-like, core domain superfamily (20.1%)" INAAKPTAEKPFVLGLPTGSSPIGMYK root 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" GO:0005829 (14.3%) "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" cytosol (14.3%) "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" ERAPMYVVGETTGDHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.5%) GO:0006164 (0.7%)" GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (19.6%) GO:0046872 (19.6%)" "'de novo' IMP biosynthetic process (19.5%) purine nucleotide biosynthetic process (0.7%)" cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (19.6%) metal ion binding (19.6%)" "IPR010918 (11.2%) IPR029062 (11.2%) IPR036676 (11.2%)" "PurM-like, C-terminal domain (11.2%) Class I glutamine amidotransferase-like (11.2%) PurM-like, C-terminal domain superfamily (11.2%)" KADNGWLQLNTAKTDKDGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.5.2.17 (100%) hydroxyisourate hydrolase (100%) "GO:0006144 (32.9%) GO:0051289 (0.4%)" "GO:0042597 (32.1%) GO:0032991 (0.4%)" "GO:0033971 (32.1%) GO:0016787 (1.8%) GO:0042802 (0.4%)" "purine nucleobase metabolic process (32.9%) protein homotetramerization (0.4%)" "periplasmic space (32.1%) protein-containing complex (0.4%)" "hydroxyisourate hydrolase activity (32.1%) hydrolase activity (1.8%) identical protein binding (0.4%)" "IPR023416 (17.1%) IPR036817 (17.1%) IPR000895 (16.9%)" "Transthyretin/hydroxyisourate hydrolase domain (17.1%) Transthyretin/hydroxyisourate hydrolase domain superfamily (17.1%) Transthyretin/hydroxyisourate hydrolase (16.9%)" DNSILKNPEIVSAFSYAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.2.12 (97%) 5.4.2.1 (3%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (97%) Transferred entry: 5.4.2.11 and 5.4.2.12 (3%)" "GO:0006007 (20.1%) GO:0006096 (19.5%)" GO:0005829 (20.1%) "GO:0004619 (20.1%) GO:0030145 (20.1%)" "glucose catabolic process (20.1%) glycolytic process (19.5%)" cytosol (20.1%) "phosphoglycerate mutase activity (20.1%) manganese ion binding (20.1%)" "IPR005995 (20.1%) IPR006124 (20.1%) IPR011258 (20.1%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.1%) Metalloenzyme (20.1%) BPG-independent PGAM, N-terminal (20.1%)" HNFSAGPSILPR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.8%) GO:0008615 (19.8%)" GO:0005737 (19.8%) "GO:0004648 (19.8%) GO:0030170 (19.8%) GO:0008483 (0.8%)" "L-serine biosynthetic process (19.8%) pyridoxine biosynthetic process (19.8%)" cytoplasm (19.8%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.8%) pyridoxal phosphate binding (19.8%) transaminase activity (0.8%)" "IPR000192 (19.5%) IPR015421 (19.5%) IPR015422 (19.5%)" "Aminotransferase class V domain (19.5%) Pyridoxal phosphate-dependent transferase, major domain (19.5%) Pyridoxal phosphate-dependent transferase, small domain (19.5%)" GDPTLMFTNAGMNQFK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR002318 (9.1%) IPR018164 (9.1%) IPR018165 (9.1%)" "Alanine-tRNA ligase, class IIc (9.1%) Alanyl-tRNA synthetase, class IIc, N-terminal (9.1%) Alanyl-tRNA synthetase, class IIc, core domain (9.1%)" LVFTYQGDGDLACIGTAETIHALNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.3 (63.3%) 1.2.-.- (16.7%) 1.2.7.1 (13.3%)" "2-oxoglutarate synthase (63.3%) Acting on the aldehyde or oxo group of donors (16.7%) pyruvate synthase (13.3%)" GO:0044281 (30.7%) "GO:0030976 (34.6%) GO:0016625 (30.4%) GO:0047553 (3.1%)" small molecule metabolic process (30.7%) "thiamine pyrophosphate binding (34.6%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (30.4%) 2-oxoglutarate synthase activity (3.1%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" VTFKVDKATAGTEVYVAGVRPSVSDTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) EMQLFMFSDTVGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004829 (16.7%) GO:0005524 (16.7%)" threonyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) threonine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" IQFTPDLLPADVIGTMIYSQK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR011703 (25%) IPR027417 (25%) IPR041628 (25%)" "ATPase, AAA-3 (25%) P-loop containing nucleoside triphosphate hydrolase (25%) ChlI/MoxR, AAA lid domain (25%)" LIDANTTIPARK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0042026 (0.3%) GO:0051085 (0.3%)" "GO:0005524 (32.8%) GO:0051082 (32.8%) GO:0140662 (32.8%)" "protein refolding (0.3%) obsolete chaperone cofactor-dependent protein refolding (0.3%)" "ATP binding (32.8%) unfolded protein binding (32.8%) ATP-dependent protein folding chaperone (32.8%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" VGDEVEAVVLTLDREER Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (24.7%) "GO:0022627 (24.1%) GO:0005840 (1%) GO:1990904 (0.6%)" "GO:0003729 (24.7%) GO:0003735 (24.7%)" translation (24.7%) "cytosolic small ribosomal subunit (24.1%) ribosome (1%) ribonucleoprotein complex (0.6%)" "mRNA binding (24.7%) structural constituent of ribosome (24.7%)" "IPR003029 (24.5%) IPR012340 (24.5%) IPR035104 (24.5%)" "S1 domain (24.5%) Nucleic acid-binding, OB-fold (24.5%) Ribosomal protein S1-like (24.5%)" VSCPEEIAYR root 2.7.7.24 (100%) glucose-1-phosphate thymidylyltransferase (100%) "GO:0009243 (0.3%) GO:0019305 (0.3%) GO:0000271 (0.2%)" "GO:0008879 (50.5%) GO:0046872 (47.9%) GO:0016779 (0.5%)" "O antigen biosynthetic process (0.3%) dTDP-rhamnose biosynthetic process (0.3%) polysaccharide biosynthetic process (0.2%)" "glucose-1-phosphate thymidylyltransferase activity (50.5%) metal ion binding (47.9%) nucleotidyltransferase activity (0.5%)" "IPR005907 (33.4%) IPR029044 (33.4%) IPR005835 (33.1%)" "Glucose-1-phosphate thymidylyltransferase, short form (33.4%) Nucleotide-diphospho-sugar transferases (33.4%) Nucleotidyl transferase domain (33.1%)" FNLDENEVRPYLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.15.5 (100%) peptidyl-dipeptidase Dcp (100%) GO:0006508 (19.2%) GO:0005829 (19.2%) "GO:0004180 (19.2%) GO:0004222 (19.2%) GO:0046872 (19.2%)" proteolysis (19.2%) cytosol (19.2%) "carboxypeptidase activity (19.2%) metalloendopeptidase activity (19.2%) metal ion binding (19.2%)" "IPR001567 (16.7%) IPR024077 (16.7%) IPR024079 (16.7%)" "Peptidase M3A/M3B catalytic domain (16.7%) Neurolysin/Thimet oligopeptidase, domain 2 (16.7%) Metallopeptidase, catalytic domain superfamily (16.7%)" SNPAVVSEIDGEVGFGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.1%) GO:0000428 (17.1%) "GO:0003677 (17.1%) GO:0003899 (17.1%) GO:0000287 (15.8%)" DNA-templated transcription (17.1%) DNA-directed RNA polymerase complex (17.1%) "DNA binding (17.1%) DNA-directed RNA polymerase activity (17.1%) magnesium ion binding (15.8%)" "IPR007081 (9.7%) IPR045867 (9.7%) IPR000722 (8.9%)" "RNA polymerase Rpb1, domain 5 (9.7%) DNA-directed RNA polymerase, subunit beta-prime (9.7%) RNA polymerase, alpha subunit (8.9%)" QAVTNPQNTLFAIK root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0051301 (0.2%) GO:0042026 (0.1%) GO:0051085 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0.1%) GO:0005886 (0%)" "GO:0005524 (26.3%) GO:0140662 (26.3%) GO:0051082 (25%)" "cell division (0.2%) protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytosol (0.1%) cytoplasm (0.1%) plasma membrane (0%)" "ATP binding (26.3%) ATP-dependent protein folding chaperone (26.3%) unfolded protein binding (25%)" "IPR013126 (17.1%) IPR043129 (17.1%) IPR018181 (17%)" "Heat shock protein 70 family (17.1%) ATPase, nucleotide binding domain (17.1%) Heat shock protein 70, conserved site (17%)" SSSLYTVHTPVPAGHDYFDEGLFGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" VVLKDGSFHPVDSDQLSFEICAIQAYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (20.7%) GO:0005737 (18.6%) "GO:0003746 (20.7%) GO:0005525 (20.7%) GO:0003924 (19.3%)" ribosome disassembly (20.7%) cytoplasm (18.6%) "translation elongation factor activity (20.7%) GTP binding (20.7%) GTPase activity (19.3%)" "IPR000640 (6.5%) IPR005517 (6.5%) IPR014721 (6.5%)" "Elongation factor EFG, domain V-like (6.5%) Translation elongation factor EFG/EF2, domain IV (6.5%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.5%)" VIKPLIDQTFTTVTER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.2.1.169 (96.6%) 3.2.1.52 (3.4%)" "protein O-GlcNAcase (96.6%) beta-N-acetylhexosaminidase (3.4%)" GO:0005975 (44.1%) "GO:0016231 (44.1%) GO:0102571 (11.9%)" carbohydrate metabolic process (44.1%) "beta-N-acetylglucosaminidase activity (44.1%) [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine/L-threonine O-N-acetyl-alpha-D-glucosaminase activity (11.9%)" "IPR011496 (12.5%) IPR013780 (12.5%) IPR015882 (12.5%)" "Beta-N-acetylglucosaminidase, catalytic domain (12.5%) Glycosyl hydrolase, all-beta (12.5%) Beta-hexosaminidase, bacterial type, N-terminal (12.5%)" LKGNTGENLLALLEGRLDNVVYR root "GO:0042274 (19.8%) GO:0006412 (19.6%) GO:0006353 (0.1%)" "GO:0015935 (19.8%) GO:0005840 (0.4%) GO:0005737 (0%)" "GO:0019843 (19.8%) GO:0003735 (19.8%) GO:0016787 (0.3%)" "ribosomal small subunit biogenesis (19.8%) translation (19.6%) DNA-templated transcription termination (0.1%)" "small ribosomal subunit (19.8%) ribosome (0.4%) cytoplasm (0%)" "rRNA binding (19.8%) structural constituent of ribosome (19.8%) hydrolase activity (0.3%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR018079 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, conserved site (16.7%)" RKLIGDDEHGWDNEGVFNYEGGCYAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.1%) GO:0005829 (17.1%) "GO:0004612 (17.1%) GO:0005524 (17.1%) GO:0046872 (17.1%)" gluconeogenesis (17.1%) cytosol (17.1%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.1%) ATP binding (17.1%) metal ion binding (17.1%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" KVVTDPGDSQTLQAGQIVTAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" IGQATEHNYCGVNCGIMDQFASVFGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (19.5%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (19.5%)" "IPR000705 (10.1%) IPR006203 (10.1%) IPR006204 (10.1%)" "Galactokinase (10.1%) GHMP kinase, ATP-binding, conserved site (10.1%) GHMP kinase N-terminal domain (10.1%)" AQIFNFSSGPAMLPAEVLK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.8%) GO:0008615 (19.6%) GO:0006563 (0.1%)" "GO:0005737 (19.8%) GO:0005829 (0.1%)" "GO:0004648 (19.8%) GO:0030170 (19.8%) GO:0008483 (0.4%)" "L-serine biosynthetic process (19.8%) pyridoxine biosynthetic process (19.6%) L-serine metabolic process (0.1%)" "cytoplasm (19.8%) cytosol (0.1%)" "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.8%) pyridoxal phosphate binding (19.8%) transaminase activity (0.4%)" "IPR000192 (17.3%) IPR015421 (17.3%) IPR015424 (17.3%)" "Aminotransferase class V domain (17.3%) Pyridoxal phosphate-dependent transferase, major domain (17.3%) Pyridoxal phosphate-dependent transferase (17.3%)" AKQVDPSVAEEANTLISSYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (44%) IPR019734 (44%) IPR013105 (12%)" "Tetratricopeptide-like helical domain superfamily (44%) Tetratricopeptide repeat (44%) Tetratricopeptide repeat 2 (12%)" ISKYHLCEYPLFINALAITK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.7%) GO:0006531 (24.7%)" GO:0005829 (24.7%) "GO:0008797 (24.7%) GO:0016853 (1.3%)" "tricarboxylic acid cycle (24.7%) aspartate metabolic process (24.7%)" cytosol (24.7%) "aspartate ammonia-lyase activity (24.7%) isomerase activity (1.3%)" "IPR000362 (12.6%) IPR008948 (12.6%) IPR018951 (12.6%)" "Fumarate lyase family (12.6%) L-Aspartase-like (12.6%) Fumarase C, C-terminal (12.6%)" EAKDMVDSAPSAIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" THNLEPYFESFINNLRR Simiiformes Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Euarchontoglires Primates Haplorrhini Simiiformes "GO:0031424 (8.4%) GO:0045109 (8.4%) GO:0051290 (5.3%)" "GO:0045095 (10.9%) GO:0005615 (7.3%) GO:0005737 (5.6%)" "GO:0030280 (8.7%) GO:0046982 (5.3%) GO:0030246 (5%)" "keratinization (8.4%) intermediate filament organization (8.4%) protein heterotetramerization (5.3%)" "keratin filament (10.9%) extracellular space (7.3%) cytoplasm (5.6%)" "structural constituent of skin epidermis (8.7%) protein heterodimerization activity (5.3%) carbohydrate binding (5%)" "IPR003054 (20.2%) IPR032449 (20.2%) IPR039008 (20.2%)" "Keratin, type II (20.2%) Keratin type II cytoskeletal 1, tail (20.2%) Intermediate filament, rod domain (20.2%)" SAGNFAQLTSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0002181 (20%) "GO:0015934 (20%) GO:0005840 (0.1%)" "GO:0003735 (20%) GO:0016740 (20%) GO:0019843 (18.8%)" cytoplasmic translation (20%) "large ribosomal subunit (20%) ribosome (0.1%)" "structural constituent of ribosome (20%) transferase activity (20%) rRNA binding (18.8%)" "IPR002171 (11.1%) IPR005880 (11.1%) IPR008991 (11.1%)" "Large ribosomal subunit protein uL2 (11.1%) Large ribosomal subunit protein uL2, bacteria/organella (11.1%) Translation protein SH3-like domain superfamily (11.1%)" YVVMSAPSKDDTPMFVCGVNEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0006006 (24.8%) "GO:0051287 (25%) GO:0050661 (24.8%) GO:0004365 (13.2%)" glucose metabolic process (24.8%) "NAD binding (25%) NADP binding (24.8%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (13.2%)" "IPR020830 (16.8%) IPR020831 (16.8%) IPR020828 (16.7%)" "Glyceraldehyde 3-phosphate dehydrogenase, active site (16.8%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (16.8%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%)" LAEYIELIKESK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.3.1.1 (95.5%) 1.3.98.1 (4.5%)" "dihydrouracil dehydrogenase (NAD(+)) (95.5%) dihydroorotate oxidase (fumarate) (4.5%)" "GO:0006210 (13.6%) GO:0006212 (13.6%) GO:0044205 (12.2%)" GO:0005737 (14.3%) "GO:0002058 (13.6%) GO:0004152 (13.6%) GO:0050661 (13.6%)" "thymine catabolic process (13.6%) uracil catabolic process (13.6%) 'de novo' UMP biosynthetic process (12.2%)" cytoplasm (14.3%) "uracil binding (13.6%) dihydroorotate dehydrogenase activity (13.6%) NADP binding (13.6%)" "IPR005720 (32.8%) IPR012135 (32.8%) IPR013785 (32.8%)" "Dihydroorotate dehydrogenase, catalytic (32.8%) Dihydroorotate dehydrogenase, class 1/ 2 (32.8%) Aldolase-type TIM barrel (32.8%)" IGEVHDGAATMDWMEQEQER root "3.6.5.3 (91.7%) 3.6.5.- (8.3%)" "protein-synthesizing GTPase (91.7%) Acting on GTP; involved in cellular and subcellular movement (8.3%)" "GO:0032790 (18.2%) GO:0006412 (0.2%) GO:0070125 (0.1%)" "GO:0005737 (16.9%) GO:0005739 (0.1%) GO:0005759 (0%)" "GO:0003924 (18.2%) GO:0005525 (18.2%) GO:0003746 (18.2%)" "ribosome disassembly (18.2%) translation (0.2%) mitochondrial translational elongation (0.1%)" "cytoplasm (16.9%) mitochondrion (0.1%) mitochondrial matrix (0%)" "GTPase activity (18.2%) GTP binding (18.2%) translation elongation factor activity (18.2%)" "IPR000795 (6.5%) IPR031157 (6.5%) IPR005225 (6.5%)" "Translational (tr)-type GTP-binding domain (6.5%) Tr-type G domain, conserved site (6.5%) Small GTP-binding domain (6.5%)" VAAGVGVTADTLDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (20.2%) GO:0006177 (19.9%)" "GO:0003938 (20.2%) GO:0000166 (19.9%) GO:0046872 (19.9%)" "GTP biosynthetic process (20.2%) GMP biosynthetic process (19.9%)" "IMP dehydrogenase activity (20.2%) nucleotide binding (19.9%) metal ion binding (19.9%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" FENKEDDYNEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.1.3.11 (100%) N-succinylornithine carbamoyltransferase (100%) "GO:0019240 (25%) GO:0042450 (25%)" "GO:0004585 (25%) GO:0016597 (25%)" "citrulline biosynthetic process (25%) L-arginine biosynthetic process via ornithine (25%)" "ornithine carbamoyltransferase activity (25%) amino acid binding (25%)" "IPR006130 (20%) IPR006131 (20%) IPR006132 (20%)" "Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20%)" REGDLPAYWADASK Bacteria Bacteria 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) "GO:0006012 (30.8%) GO:0005996 (1.8%) GO:0005975 (0.3%)" "GO:0005829 (32.3%) GO:0005737 (0.3%)" "GO:0003978 (32.6%) GO:0016853 (0.5%) GO:0016829 (0.3%)" "galactose metabolic process (30.8%) monosaccharide metabolic process (1.8%) carbohydrate metabolic process (0.3%)" "cytosol (32.3%) cytoplasm (0.3%)" "UDP-glucose 4-epimerase activity (32.6%) isomerase activity (0.5%) lyase activity (0.3%)" "IPR036291 (34%) IPR005886 (31.9%) IPR001509 (30.1%)" "NAD(P)-binding domain superfamily (34%) UDP-glucose 4-epimerase (31.9%) NAD-dependent epimerase/dehydratase (30.1%)" YVDILQNPDIR root "GO:0006879 (0%) GO:0006970 (0%) GO:0016226 (0%)" "GO:0005737 (24.8%) GO:1990229 (0%) GO:0005759 (0%)" "GO:0051537 (25.2%) GO:0046872 (25%) GO:0015036 (24.9%)" "intracellular iron ion homeostasis (0%) response to osmotic stress (0%) iron-sulfur cluster assembly (0%)" "cytoplasm (24.8%) iron-sulfur cluster assembly complex (0%) mitochondrial matrix (0%)" "2 iron, 2 sulfur cluster binding (25.2%) metal ion binding (25%) disulfide oxidoreductase activity (24.9%)" "IPR004480 (20.1%) IPR036249 (20.1%) IPR002109 (20.1%)" "Monothiol glutaredoxin-related (20.1%) Thioredoxin-like superfamily (20.1%) Glutaredoxin (20.1%)" NLETASYDNGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016853 (100%) isomerase activity (100%) "IPR006311 (25%) IPR013022 (25%) IPR036237 (25%)" "Twin-arginine translocation pathway, signal sequence (25%) Xylose isomerase-like, TIM barrel domain (25%) Xylose isomerase-like superfamily (25%)" DSVCSSLESVFALAGAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" KDENGSIVYDDDFFGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.5%) GO:0005737 (19.2%) "GO:0004816 (20.5%) GO:0005524 (20.5%) GO:0003676 (19.2%)" asparaginyl-tRNA aminoacylation (20.5%) cytoplasm (19.2%) "asparagine-tRNA ligase activity (20.5%) ATP binding (20.5%) nucleic acid binding (19.2%)" "IPR002312 (14.6%) IPR004364 (14.6%) IPR004522 (14.6%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.6%) Aminoacyl-tRNA synthetase, class II (D/K/N) (14.6%) Asparagine-tRNA ligase (14.6%)" AQGDPCIMNLWVHDGSKDITVNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.14 (100%) L-rhamnose isomerase (100%) "GO:0019301 (20%) GO:0019324 (20%)" GO:0005737 (20%) "GO:0008740 (20%) GO:0030145 (20%)" "rhamnose catabolic process (20%) L-lyxose metabolic process (20%)" cytoplasm (20%) "L-rhamnose isomerase activity (20%) manganese ion binding (20%)" "IPR009308 (33.3%) IPR036237 (33.3%) IPR050337 (33.3%)" "Rhamnose isomerase (33.3%) Xylose isomerase-like superfamily (33.3%) L-rhamnose isomerase (33.3%)" TDKVYYHHTGHIGGIK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.8%) GO:0017148 (19.8%) GO:0002181 (0%)" "GO:0022625 (19.8%) GO:0005840 (0.6%) GO:0005737 (0.1%)" "GO:0003735 (19.8%) GO:0003729 (19.8%) GO:0008270 (0%)" "translation (19.8%) negative regulation of translation (19.8%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (19.8%) ribosome (0.6%) cytoplasm (0.1%)" "structural constituent of ribosome (19.8%) mRNA binding (19.8%) zinc ion binding (0%)" "IPR005822 (25%) IPR005823 (25%) IPR036899 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13 superfamily (25%)" SDYPNQINNVIGFPYIFR Pseudomonadati Bacteria Pseudomonadati "1.1.1.40 (98.5%) 2.3.1.8 (1%) 1.1.5.4 (0.5%)" "malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (98.5%) phosphate acetyltransferase (1%) malate dehydrogenase (quinone) (0.5%)" GO:0006108 (16.4%) "GO:0051287 (18.1%) GO:0046872 (17.7%) GO:0016746 (16.9%)" malate metabolic process (16.4%) "NAD binding (18.1%) metal ion binding (17.7%) acyltransferase activity (16.9%)" "IPR012302 (9.1%) IPR036291 (9.1%) IPR051674 (9.1%)" "Malic enzyme, NAD-binding (9.1%) NAD(P)-binding domain superfamily (9.1%) Malate Decarboxylating Enzymes (9.1%)" GALDWMGPFHDAIKPVVEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.86 (93.3%) 1.1.1.- (6.7%)" "ketol-acid reductoisomerase (NADP(+)) (93.3%) With NAD(+) or NADP(+) as acceptor (6.7%)" "GO:0009097 (21%) GO:0009099 (21%)" "GO:0004455 (21%) GO:0046872 (19.5%) GO:0016853 (17.6%)" "isoleucine biosynthetic process (21%) L-valine biosynthetic process (21%)" "ketol-acid reductoisomerase activity (21%) metal ion binding (19.5%) isomerase activity (17.6%)" "IPR000506 (17.1%) IPR008927 (17.1%) IPR013328 (17.1%)" "Ketol-acid reductoisomerase, C-terminal (17.1%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (17.1%) 6-phosphogluconate dehydrogenase, domain 2 (17.1%)" LAAEVLEMIEPYVKPGVSTGELDR root 3.4.11.18 (100%) methionyl aminopeptidase (100%) GO:0006508 (19.7%) GO:0005829 (19.9%) "GO:0004239 (20%) GO:0070006 (19.9%) GO:0005506 (18%)" proteolysis (19.7%) cytosol (19.9%) "initiator methionyl aminopeptidase activity (20%) metalloaminopeptidase activity (19.9%) iron ion binding (18%)" "IPR036005 (25.2%) IPR000994 (25%) IPR001714 (25%)" "Creatinase/aminopeptidase-like (25.2%) Peptidase M24 (25%) Peptidase M24, methionine aminopeptidase (25%)" NKDGKEFNEAEEIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000297 (25%) IPR027304 (25%) IPR046357 (25%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (25%) Trigger factor/SurA domain superfamily (25%) Peptidyl-prolyl cis-trans isomerase domain superfamily (25%)" LRQDIYDHIEEFTAIIEEPTFKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR012808 (50%) IPR015996 (50%)" "Conserved hypothetical protein CHP02453 (50%) Uncharacterised conserved protein UCP028451 (50%)" FKEYQPFKGDIERR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0000027 (10%) GO:0009409 (10%) GO:0010467 (8.1%)" "GO:0005829 (10%) GO:1990904 (10%)" "GO:0000049 (10%) GO:0003924 (10%) GO:0005525 (10%)" "ribosomal large subunit assembly (10%) response to cold (10%) gene expression (8.1%)" "cytosol (10%) ribonucleoprotein complex (10%)" "tRNA binding (10%) GTPase activity (10%) GTP binding (10%)" "IPR000640 (6.9%) IPR035647 (6.9%) IPR035651 (6.9%)" "Elongation factor EFG, domain V-like (6.9%) EF-G domain III/V-like (6.9%) BipA, domain V (6.9%)" EMADMIANGMK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (50%) GO:0004356 (50%) glutamine biosynthetic process (50%) glutamine synthetase activity (50%) "IPR008146 (14.4%) IPR008147 (14.4%) IPR014746 (14.4%)" "Glutamine synthetase, catalytic domain (14.4%) Glutamine synthetase, N-terminal domain (14.4%) Glutamine synthetase/guanido kinase, catalytic domain (14.4%)" LAEVDTVIDCSSLLDDKYLLVQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.9%) GO:0005829 (16.9%) "GO:0003723 (16.9%) GO:0004831 (16.9%) GO:0005524 (16.9%)" tyrosyl-tRNA aminoacylation (16.9%) cytosol (16.9%) "RNA binding (16.9%) tyrosine-tRNA ligase activity (16.9%) ATP binding (16.9%)" "IPR001412 (12.5%) IPR002305 (12.5%) IPR002307 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Aminoacyl-tRNA synthetase, class Ic (12.5%) Tyrosine-tRNA ligase (12.5%)" LAEVASEYLR root "GO:0006260 (23.7%) GO:0006281 (14.1%) GO:0006310 (13.5%)" "GO:0009295 (23.7%) GO:0005829 (0.1%) GO:0030894 (0.1%)" "GO:0003697 (23.7%) GO:0003677 (0.3%) GO:0008047 (0.1%)" "DNA replication (23.7%) DNA repair (14.1%) DNA recombination (13.5%)" "nucleoid (23.7%) cytosol (0.1%) replisome (0.1%)" "single-stranded DNA binding (23.7%) DNA binding (0.3%) enzyme activator activity (0.1%)" "IPR000424 (33.3%) IPR011344 (33.3%) IPR012340 (33.3%)" "Primosome PriB/single-strand DNA-binding (33.3%) Single-stranded DNA-binding protein (33.3%) Nucleic acid-binding, OB-fold (33.3%)" HYEEEKEAAAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "6.3.4.14 (70%) 6.4.1.7 (30%)" "biotin carboxylase (70%) 2-oxoglutarate carboxylase (30%)" GO:2001295 (17.8%) "GO:0005524 (22.2%) GO:0046872 (22.2%) GO:0003989 (15.6%)" malonyl-CoA biosynthetic process (17.8%) "ATP binding (22.2%) metal ion binding (22.2%) acetyl-CoA carboxylase activity (15.6%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" VMDLTATCMCK Pseudomonadati Bacteria Pseudomonadati 2.7.4.22 (100%) UMP kinase (100%) "GO:0006225 (19.9%) GO:0044210 (19.7%)" "GO:0005737 (19.7%) GO:0016020 (0.9%)" "GO:0005524 (19.9%) GO:0033862 (19.9%) GO:0016301 (0.1%)" "UDP biosynthetic process (19.9%) 'de novo' CTP biosynthetic process (19.7%)" "cytoplasm (19.7%) membrane (0.9%)" "ATP binding (19.9%) UMP kinase activity (19.9%) kinase activity (0.1%)" "IPR001048 (25.1%) IPR036393 (25.1%) IPR011817 (24.9%)" "Aspartate/glutamate/uridylate kinase (25.1%) Acetylglutamate kinase-like superfamily (25.1%) Uridylate kinase (24.9%)" IGSFEAALLAYVDRDHAPLMQEINQTGGYNDEIEGK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "7.1.2.2 (93.6%) 3.6.3.14 (6.4%)" "H(+)-transporting two-sector ATPase (93.6%) Transferred entry: 7.1.2.2 (6.4%)" "GO:0015986 (0.5%) GO:0042777 (0.1%)" "GO:0045259 (18.5%) GO:0005886 (17.7%) GO:0016020 (0.1%)" "GO:0005524 (18.5%) GO:0043531 (18.5%) GO:0046933 (18.5%)" "proton motive force-driven ATP synthesis (0.5%) proton motive force-driven plasma membrane ATP synthesis (0.1%)" "proton-transporting ATP synthase complex (18.5%) plasma membrane (17.7%) membrane (0.1%)" "ATP binding (18.5%) ADP binding (18.5%) proton-transporting ATP synthase activity, rotational mechanism (18.5%)" "IPR000793 (10.5%) IPR038376 (10.5%) IPR005294 (10.3%)" "ATP synthase, alpha subunit, C-terminal (10.5%) ATP synthase, alpha subunit, C-terminal domain superfamily (10.5%) ATP synthase, F1 complex, alpha subunit (10.3%)" LVDIEQVSSTHAK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.6%) GO:0006352 (0%) GO:0006879 (0%)" "GO:0000428 (16.9%) GO:0005737 (16.4%) GO:0000345 (0%)" "GO:0003899 (16.7%) GO:0046983 (16.7%) GO:0003677 (16.3%)" "DNA-templated transcription (16.6%) DNA-templated transcription initiation (0%) intracellular iron ion homeostasis (0%)" "DNA-directed RNA polymerase complex (16.9%) cytoplasm (16.4%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%) DNA binding (16.3%)" "IPR036603 (16.9%) IPR011263 (16.8%) IPR036643 (16.8%)" "RNA polymerase, RBP11-like subunit (16.9%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) DNA-directed RNA polymerase, insert domain superfamily (16.8%)" FALPNSEIMIHQPLSGAR QYMAEVESGVYPGEEHSFH Bacteria Bacteria 2.1.2.11 (100%) 3-methyl-2-oxobutanoate hydroxymethyltransferase (100%) "GO:0015940 (17.9%) GO:0032259 (14.2%)" "GO:0005737 (17.8%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003864 (17.9%) GO:0000287 (17.8%) GO:0008168 (14.2%)" "pantothenate biosynthetic process (17.9%) methylation (14.2%)" "cytoplasm (17.8%) cytosol (0%) membrane (0%)" "3-methyl-2-oxobutanoate hydroxymethyltransferase activity (17.9%) magnesium ion binding (17.8%) methyltransferase activity (14.2%)" "IPR003700 (33.3%) IPR015813 (33.3%) IPR040442 (33.3%)" "Ketopantoate hydroxymethyltransferase (33.3%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (33.3%) Pyruvate kinase-like domain superfamily (33.3%)" IEKEGLTAMANAAFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (19.7%) GO:0005829 (0.2%) "GO:0046872 (20.2%) GO:0051539 (20.2%) GO:0004333 (19.7%)" tricarboxylic acid cycle (19.7%) cytosol (0.2%) "metal ion binding (20.2%) 4 iron, 4 sulfur cluster binding (20.2%) fumarate hydratase activity (19.7%)" "IPR004646 (16.9%) IPR051208 (16.9%) IPR004647 (16.6%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.9%) Class-I Fumarase/Tartrate Dehydratase (16.9%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.6%)" VAEAIAASFGSFADFK Bacteria Bacteria 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0000303 (0.4%) GO:0006801 (0.4%) GO:0019430 (0.4%)" "GO:0005737 (30.3%) GO:0005829 (0.4%) GO:0016020 (0.4%)" "GO:0004784 (33.1%) GO:0046914 (29.9%) GO:0046872 (2.8%)" "response to superoxide (0.4%) superoxide metabolic process (0.4%) removal of superoxide radicals (0.4%)" "cytoplasm (30.3%) cytosol (0.4%) membrane (0.4%)" "superoxide dismutase activity (33.1%) transition metal ion binding (29.9%) metal ion binding (2.8%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" MNNEQLYKDFEALNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (21.7%) GO:0009317 (21.7%) "GO:0003989 (21.7%) GO:0004658 (21.7%) GO:0016740 (13%)" carbon fixation (21.7%) acetyl-CoA carboxylase complex (21.7%) "acetyl-CoA carboxylase activity (21.7%) propionyl-CoA carboxylase activity (21.7%) transferase activity (13%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" AELVPEYANVAFNLQDPNKVSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0003755 (100%) peptidyl-prolyl cis-trans isomerase activity (100%) "IPR000297 (20%) IPR023058 (20%) IPR027304 (20%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (20%) Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site (20%) Trigger factor/SurA domain superfamily (20%)" FIQGLHLAGIELDRR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae "GO:0000027 (16.7%) GO:0006412 (16.7%)" "GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16.7%)" "ribosomal large subunit assembly (16.7%) translation (16.7%)" "ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR005813 (33.3%) IPR035566 (33.3%) IPR049946 (33.3%)" "Large ribosomal subunit protein bL20 (33.3%) Ribosomal protein bL20, C-terminal (33.3%) Large ribosomal subunit protein bL20, conserved site (33.3%)" VRQNVIEVALDYMAVGLDPMK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (25%) GO:0005829 (25%) "GO:0004830 (25%) GO:0005524 (25%)" tryptophanyl-tRNA aminoacylation (25%) cytosol (25%) "tryptophan-tRNA ligase activity (25%) ATP binding (25%)" "IPR001412 (20%) IPR002305 (20%) IPR002306 (20%)" "Aminoacyl-tRNA synthetase, class I, conserved site (20%) Aminoacyl-tRNA synthetase, class Ic (20%) Tryptophan-tRNA ligase (20%)" VNDGVLTIELPKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" DFSGIRNEEDYLITEDGAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0030145 (25%) GO:0070006 (25%)" proteolysis (25%) cytosol (25%) "manganese ion binding (25%) metalloaminopeptidase activity (25%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" MEVDSVPEGLDEISR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0034605 (19.6%) GO:0042026 (19.6%) GO:0006508 (1.1%)" GO:0005737 (19.6%) "GO:0005524 (19.6%) GO:0016887 (19.6%) GO:0008233 (1.1%)" "cellular response to heat (19.6%) protein refolding (19.6%) proteolysis (1.1%)" cytoplasm (19.6%) "ATP binding (19.6%) ATP hydrolysis activity (19.6%) peptidase activity (1.1%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" RAIVWLCQLTDKPILK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.5%) GO:0006044 (32.5%)" "GO:0004342 (32.5%) GO:0016853 (2.5%)" "carbohydrate metabolic process (32.5%) N-acetylglucosamine metabolic process (32.5%)" "glucosamine-6-phosphate deaminase activity (32.5%) isomerase activity (2.5%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" TFPSQENVPAGIITMGISTMMNAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.4%) GO:0006044 (32.4%)" "GO:0004342 (32.4%) GO:0016853 (2.9%)" "carbohydrate metabolic process (32.4%) N-acetylglucosamine metabolic process (32.4%)" "glucosamine-6-phosphate deaminase activity (32.4%) isomerase activity (2.9%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" FGGAQVLIRPASHGTGVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006412 (17.2%) GO:0042254 (15.5%)" "GO:0015935 (17.2%) GO:0005737 (15.5%)" "GO:0003735 (17.2%) GO:0019843 (17.2%)" "translation (17.2%) ribosome biogenesis (15.5%)" "small ribosomal subunit (17.2%) cytoplasm (15.5%)" "structural constituent of ribosome (17.2%) rRNA binding (17.2%)" "IPR000851 (14.3%) IPR005324 (14.3%) IPR005712 (14.3%)" "Small ribosomal subunit protein uS5 (14.3%) Small ribosomal subunit protein uS5, C-terminal (14.3%) Small ribosomal subunit protein uS5, bacteria (14.3%)" VIPFFDFVVPTELPGVDPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.4%) GO:0005829 (17.4%) "GO:0004612 (17.4%) GO:0005524 (17.4%) GO:0046872 (16.6%)" gluconeogenesis (17.4%) cytosol (17.4%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.4%) ATP binding (17.4%) metal ion binding (16.6%)" "IPR001272 (25.3%) IPR013035 (25.3%) IPR008210 (24.7%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.3%) Phosphoenolpyruvate carboxykinase, C-terminal (25.3%) Phosphoenolpyruvate carboxykinase, N-terminal (24.7%)" ALTTMETATDVNAVKEGVELIYNK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006457 (16.7%) GO:0005737 (16.7%) "GO:0000774 (16.7%) GO:0042803 (16.7%) GO:0051082 (16.7%)" protein folding (16.7%) cytoplasm (16.7%) "adenyl-nucleotide exchange factor activity (16.7%) protein homodimerization activity (16.7%) unfolded protein binding (16.7%)" "IPR000740 (33.3%) IPR009012 (33.3%) IPR013805 (33.3%)" "GrpE nucleotide exchange factor (33.3%) GrpE nucleotide exchange factor, head (33.3%) GrpE nucleotide exchange factor, coiled-coil (33.3%)" SEVAVPGIDASTFDGIIQK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.11.1.15 (78.6%) 1.11.1.- (14.3%) 1.11.1.24 (7.1%)" "Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (78.6%) Peroxidases (14.3%) thioredoxin-dependent peroxiredoxin (7.1%)" "GO:0006979 (33%) GO:0006972 (0.3%) GO:0033194 (0.3%)" "GO:0005737 (30.3%) GO:0005829 (0.3%)" "GO:0004601 (31.3%) GO:0051920 (4%) GO:0042803 (0.3%)" "response to oxidative stress (33%) hyperosmotic response (0.3%) response to hydroperoxide (0.3%)" "cytoplasm (30.3%) cytosol (0.3%)" "peroxidase activity (31.3%) peroxiredoxin activity (4%) protein homodimerization activity (0.3%)" "IPR015946 (20.4%) IPR036102 (20.4%) IPR052707 (20.2%)" "K homology domain-like, alpha/beta (20.4%) OsmC/Ohr superfamily (20.4%) OsmC/Ohr Peroxiredoxin (20.2%)" SETATNFNNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.2%) GO:0006543 (33.2%)" "GO:0004359 (33.2%) GO:0016787 (0.5%)" "glutamate biosynthetic process (33.2%) L-glutamine catabolic process (33.2%)" "glutaminase activity (33.2%) hydrolase activity (0.5%)" "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" HFLGDGVVTGYGTIEGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.4.1.3 (80%) 6.-.-.- (20%)" "propionyl-CoA carboxylase (80%) Ligases (20%)" GO:0015977 (20.4%) GO:0009317 (20.4%) "GO:0004658 (25.5%) GO:0003989 (20.4%) GO:0016740 (11.2%)" carbon fixation (20.4%) acetyl-CoA carboxylase complex (20.4%) "propionyl-CoA carboxylase activity (25.5%) acetyl-CoA carboxylase activity (20.4%) transferase activity (11.2%)" "IPR011762 (20.2%) IPR029045 (20.2%) IPR034733 (20.2%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20.2%) ClpP/crotonase-like domain superfamily (20.2%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.2%)" FSVLTPVGLLPIAVAGISIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" LEHNIIELQAKG Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006950 (21.8%) GO:0045893 (17.3%) GO:0045892 (17%)" "GO:0003700 (21.8%) GO:0003677 (21.5%)" "response to stress (21.8%) positive regulation of DNA-templated transcription (17.3%) negative regulation of DNA-templated transcription (17%)" "DNA-binding transcription factor activity (21.8%) DNA binding (21.5%)" "IPR036388 (17.2%) IPR036390 (16.9%) IPR000835 (16.7%)" "Winged helix-like DNA-binding domain superfamily (17.2%) Winged helix DNA-binding domain superfamily (16.9%) MarR-type HTH domain (16.7%)" HILIAVDLSPESK root GO:0006950 (0.5%) "GO:0005737 (99.1%) GO:0016020 (0.2%)" "GO:0042802 (0.2%) GO:0042803 (0.2%)" response to stress (0.5%) "cytoplasm (99.1%) membrane (0.2%)" "identical protein binding (0.2%) protein homodimerization activity (0.2%)" "IPR006016 (33.8%) IPR014729 (33.7%) IPR006015 (32.4%)" "UspA (33.8%) Rossmann-like alpha/beta/alpha sandwich fold (33.7%) Universal stress protein A family (32.4%)" TASSGDYNKNQYYGITAGPAYR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0009279 (50%) GO:0044384 (50%)" "cell outer membrane (50%) host outer membrane (50%)" "IPR000758 (25.1%) IPR011250 (25.1%) IPR051723 (25.1%)" "Virulence-related outer membrane protein (25.1%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (25.1%) Bacterial Outer Membrane Invasion-Related Protein (25.1%)" VTWVDDSGRVQTNMGYR VELENGHEITAHISGK Pseudomonadati Bacteria Pseudomonadati GO:0005829 (24.9%) "GO:0003743 (25.2%) GO:0043022 (24.9%) GO:0019843 (22.9%)" cytosol (24.9%) "translation initiation factor activity (25.2%) ribosome binding (24.9%) rRNA binding (22.9%)" "IPR004368 (25.2%) IPR006196 (25.2%) IPR012340 (25.2%)" "Translation initiation factor IF-1 (25.2%) RNA-binding domain, S1, IF1 type (25.2%) Nucleic acid-binding, OB-fold (25.2%)" QEWGWKPEYDLDAMTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" ELFGTLLAEIQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0016787 (50%) GO:0046872 (50%)" "hydrolase activity (50%) metal ion binding (50%)" IPR039461 (100%) Peptidase family M49 (100%) KEPFVTNVGGVIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" AVAHDVLR root "3.6.3.- (64.1%) 3.4.11.18 (12.8%) 3.6.4.13 (5.1%)" "Acting on acid anhydrides; catalyzing transmembrane movement of substances (64.1%) methionyl aminopeptidase (12.8%) RNA helicase (5.1%)" "GO:0006950 (1.4%) GO:0006508 (1.1%) GO:0006355 (0.4%)" "GO:0005829 (0.9%) GO:0016020 (0.4%) GO:0005737 (0.2%)" "GO:0005524 (43.5%) GO:0016887 (42.6%) GO:0003700 (1.4%)" "response to stress (1.4%) proteolysis (1.1%) regulation of DNA-templated transcription (0.4%)" "cytosol (0.9%) membrane (0.4%) cytoplasm (0.2%)" "ATP binding (43.5%) ATP hydrolysis activity (42.6%) DNA-binding transcription factor activity (1.4%)" "IPR027417 (22.1%) IPR041628 (21.9%) IPR011703 (21.8%)" "P-loop containing nucleoside triphosphate hydrolase (22.1%) ChlI/MoxR, AAA lid domain (21.9%) ATPase, AAA-3 (21.8%)" KGGVNVAAGTGISNYINTIPVEEQPEYPGNLELERR Bacteria Bacteria 1.2.4.1 (100%) pyruvate dehydrogenase (acetyl-transferring) (100%) GO:0042867 (0.5%) "GO:0005829 (0.5%) GO:0016020 (0.5%) GO:0045254 (0.5%)" "GO:0000287 (45%) GO:0004739 (34.1%) GO:0016491 (15.6%)" pyruvate catabolic process (0.5%) "cytosol (0.5%) membrane (0.5%) pyruvate dehydrogenase complex (0.5%)" "magnesium ion binding (45%) pyruvate dehydrogenase (acetyl-transferring) activity (34.1%) oxidoreductase activity (15.6%)" "IPR029061 (13.5%) IPR051157 (13.4%) IPR005474 (12.4%)" "Thiamin diphosphate-binding fold (13.5%) Pyruvate Dehydrogenase/Transketolase (13.4%) Transketolase, N-terminal (12.4%)" TVATLQTGKEGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR025379 (100%) Protein of unknown function DUF4295 (100%) KAGSQVSGPVPLPTEK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0000049 (19.2%) GO:0003723 (0.8%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) tRNA binding (19.2%) RNA binding (0.8%)" "IPR001848 (25%) IPR018268 (25%) IPR027486 (25%)" "Small ribosomal subunit protein uS10 (25%) Small ribosomal subunit protein uS10, conserved site (25%) Small ribosomal subunit protein uS10 domain (25%)" YTSADGEEGFPGELK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (16.7%) IPR011013 (16.7%) IPR014718 (16.7%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (16.7%) Galactose mutarotase-like domain superfamily (16.7%) Glycoside hydrolase-type carbohydrate-binding (16.7%)" FTRVDSDVIDHLIAKEER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005524 (24.3%) GO:0016887 (24.3%) GO:0051082 (24.3%)" "ATP binding (24.3%) ATP hydrolysis activity (24.3%) unfolded protein binding (24.3%)" "IPR001404 (20.7%) IPR020568 (20.7%) IPR019805 (19.5%)" "Heat shock protein Hsp90 family (20.7%) Ribosomal protein uS5 domain 2-type superfamily (20.7%) Heat shock protein Hsp90, conserved site (19.5%)" SSETGVISTEPENHQK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.2.-.- (100%) Acting on the aldehyde or oxo group of donors (100%) GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.5%) IPR002880 (12.5%) IPR009014 (12.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" GKLIDGTEFESTYER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" AIISDVNASDEDRWNAVLK root "GO:0006412 (19.9%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0005737 (19.8%) GO:0015935 (19.8%) GO:0005840 (0.6%)" "GO:0003735 (19.9%) GO:0019843 (19.5%) GO:0000049 (0.1%)" "translation (19.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytoplasm (19.8%) small ribosomal subunit (19.8%) ribosome (0.6%)" "structural constituent of ribosome (19.9%) rRNA binding (19.5%) tRNA binding (0.1%)" "IPR001209 (33.5%) IPR018271 (33.3%) IPR023036 (33.2%)" "Small ribosomal subunit protein uS14 (33.5%) Small ribosomal subunit protein uS14, conserved site (33.3%) Small ribosomal subunit protein uS14, bacteria/plastid (33.2%)" SVLVEEVDKMMQEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.5%) GO:0043335 (16.5%) GO:0051083 (16.5%)" "GO:0003755 (16.5%) GO:0043022 (16.5%) GO:0044183 (16.5%)" "protein transport (16.5%) protein unfolding (16.5%) 'de novo' cotranslational protein folding (16.5%)" "peptidyl-prolyl cis-trans isomerase activity (16.5%) ribosome binding (16.5%) protein folding chaperone (16.5%)" "IPR005215 (20.3%) IPR008881 (20.3%) IPR036611 (20.3%)" "Trigger factor (20.3%) Trigger factor, ribosome-binding, bacterial (20.3%) Trigger factor ribosome-binding domain superfamily (20.3%)" DIPALVALGEYKEVVSNLLEPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" TKEPGANGEPLYLDVKDCFYGQEDAPVIVGGR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae "1.2.7.1 (83.3%) 1.2.7.- (16.7%)" "pyruvate synthase (83.3%) With an iron-sulfur protein as acceptor (16.7%)" "GO:0006979 (14.6%) GO:0022900 (14.6%) GO:0044281 (12.7%)" "GO:0005506 (14.6%) GO:0030976 (14.6%) GO:0051539 (14.6%)" "response to oxidative stress (14.6%) electron transport chain (14.6%) small molecule metabolic process (12.7%)" "iron ion binding (14.6%) thiamine pyrophosphate binding (14.6%) 4 iron, 4 sulfur cluster binding (14.6%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" KEDLHNLTGPMTEAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006006 (31.3%) GO:0005829 (32.8%) "GO:0008861 (32.8%) GO:0016829 (3%)" glucose metabolic process (31.3%) cytosol (32.8%) "formate C-acetyltransferase activity (32.8%) lyase activity (3%)" "IPR004184 (20.6%) IPR050244 (20.6%) IPR001150 (19.6%)" "Pyruvate formate lyase domain (20.6%) Autonomous Glycyl Radical Cofactor (20.6%) Glycine radical domain (19.6%)" ADFGDVSIVSVYHPSGTSGDERQDFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.1.11.2 (100%) exodeoxyribonuclease III (100%) GO:0006284 (16.7%) "GO:0003677 (16.7%) GO:0003906 (16.7%) GO:0008081 (16.7%)" base-excision repair (16.7%) "DNA binding (16.7%) DNA-(apurinic or apyrimidinic site) endonuclease activity (16.7%) phosphoric diester hydrolase activity (16.7%)" "IPR004808 (25%) IPR005135 (25%) IPR020847 (25%)" "AP endonuclease 1 (25%) Endonuclease/exonuclease/phosphatase (25%) AP endonuclease 1, binding site (25%)" LIGAPPGYVGYEEGGQLTEK root "3.4.21.- (83.3%) 3.4.21.53 (16.7%)" "Serine endopeptidases (83.3%) endopeptidase La (16.7%)" "GO:0034605 (18.4%) GO:0006508 (13.1%) GO:0042026 (0.3%)" GO:0005737 (18.3%) "GO:0005524 (18.4%) GO:0016887 (18.4%) GO:0008233 (13.1%)" "cellular response to heat (18.4%) proteolysis (13.1%) protein refolding (0.3%)" cytoplasm (18.3%) "ATP binding (18.4%) ATP hydrolysis activity (18.4%) peptidase activity (13.1%)" "IPR003959 (8.7%) IPR050130 (8.7%) IPR001270 (8.6%)" "ATPase, AAA-type, core (8.7%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.7%) ClpA/B family (8.6%)" GGPSTGLPTKSEQTDLLQALFGR Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.2.-.- (75%) 1.2.7.3 (25%)" "Acting on the aldehyde or oxo group of donors (75%) 2-oxoglutarate synthase (25%)" GO:0006979 (50%) "GO:0016903 (48.8%) GO:0016491 (0.6%) GO:0047553 (0.6%)" response to oxidative stress (50%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors (48.8%) oxidoreductase activity (0.6%) 2-oxoglutarate synthase activity (0.6%)" "IPR002880 (13.4%) IPR029061 (13.4%) IPR050722 (13.4%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (13.4%) Thiamin diphosphate-binding fold (13.4%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (13.4%)" CQVVEGGGEILPSEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (16.7%) GO:0005886 (16.7%) "GO:0009055 (16.7%) GO:0016655 (16.7%) GO:0046872 (16.7%)" sodium ion transport (16.7%) plasma membrane (16.7%) "electron transfer activity (16.7%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (16.7%) metal ion binding (16.7%)" "IPR001041 (10%) IPR001433 (10%) IPR001709 (10%)" "2Fe-2S ferredoxin-type iron-sulfur binding domain (10%) Oxidoreductase FAD/NAD(P)-binding (10%) Flavoprotein pyridine nucleotide cytochrome reductase (10%)" NKEVYIGSSSR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR024311 (26.3%) IPR025112 (26.3%) IPR038653 (26.3%)" "Lipocalin-like domain (26.3%) Putative carbohydrate metabolism domain (26.3%) Putative carbohydrate metabolism domain superfamily (26.3%)" SRAGLADPNRPIGSFLFLGPTGVGKTELCK root "GO:0034605 (17%) GO:0042026 (15.4%) GO:0006508 (1%)" "GO:0005829 (14.5%) GO:0005737 (2.5%) GO:0016020 (0.1%)" "GO:0005524 (17%) GO:0016887 (17%) GO:0042802 (14.5%)" "cellular response to heat (17%) protein refolding (15.4%) proteolysis (1%)" "cytosol (14.5%) cytoplasm (2.5%) membrane (0.1%)" "ATP binding (17%) ATP hydrolysis activity (17%) identical protein binding (14.5%)" "IPR003959 (8.7%) IPR027417 (8.7%) IPR050130 (8.7%)" "ATPase, AAA-type, core (8.7%) P-loop containing nucleoside triphosphate hydrolase (8.7%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.7%)" IKKPVSGIAMGLIK Bacteria Bacteria 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%) GO:0006401 (0.1%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%) RNA catabolic process (0.1%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (7.9%) IPR003029 (7.9%) IPR004087 (7.9%)" "Exoribonuclease, phosphorolytic domain 1 (7.9%) S1 domain (7.9%) K Homology domain (7.9%)" AGINPAHVDSEEHMESNK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0005737 (47.1%) GO:0003746 (52.9%) cytoplasm (47.1%) translation elongation factor activity (52.9%) "IPR001816 (20.5%) IPR014039 (20.5%) IPR036402 (20.5%)" "Translation elongation factor EFTs/EF1B (20.5%) Translation elongation factor EFTs/EF1B, dimerisation (20.5%) Elongation factor Ts, dimerisation domain superfamily (20.5%)" VIEGIEVVDEIASVK ANATAWLKDNPETAKEIEK root "GO:0006310 (12.4%) GO:0006281 (12.2%) GO:0009432 (11.2%)" "GO:0005829 (12.2%) GO:0005737 (0.1%) GO:0009355 (0.1%)" "GO:0003697 (12.4%) GO:0005524 (12.4%) GO:0140664 (11.7%)" "DNA recombination (12.4%) DNA repair (12.2%) SOS response (11.2%)" "cytosol (12.2%) cytoplasm (0.1%) DNA polymerase V complex (0.1%)" "single-stranded DNA binding (12.4%) ATP binding (12.4%) ATP-dependent DNA damage sensor activity (11.7%)" "IPR023400 (11.4%) IPR049261 (11.4%) IPR013765 (11.3%)" "DNA recombination and repair protein RecA, C-terminal, superfamily (11.4%) RecA-like, C-terminal (11.4%) DNA recombination and repair protein RecA (11.3%)" TSLRPGEYNMLMLIAGVHPDYR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales GO:0003677 (100%) DNA binding (100%) IPR010982 (100%) Lambda repressor-like, DNA-binding domain superfamily (100%) GLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0000027 (1.1%) GO:0000028 (1.1%) GO:0000967 (1.1%)" GO:0005829 (1.1%) "GO:0003723 (94.3%) GO:1990275 (1.1%)" "ribosomal large subunit assembly (1.1%) ribosomal small subunit assembly (1.1%) rRNA 5'-end processing (1.1%)" cytosol (1.1%) "RNA binding (94.3%) preribosome binding (1.1%)" "IPR001890 (25%) IPR017924 (25%) IPR035920 (25%)" "RNA-binding, CRM domain (25%) RNA-binding protein YhbY (25%) YhbY-like superfamily (25%)" ETQPICFENACWAYVVGAAIAIKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR025964 (100%) GGGtGRT protein (100%) NELNEAAETLANFLKDDANIHAIQR root "5.3.1.28 (99%) 5.3.1.- (1%)" "D-sedoheptulose-7-phosphate isomerase (99%) Interconverting aldoses and ketoses (1%)" "GO:2001061 (14.5%) GO:0009244 (13.3%) GO:0005975 (3%)" "GO:0005737 (16.4%) GO:0005829 (0.1%) GO:0032991 (0%)" "GO:0097367 (16.8%) GO:0008968 (16.4%) GO:0008270 (16.3%)" "D-glycero-D-manno-heptose 7-phosphate biosynthetic process (14.5%) lipopolysaccharide core region biosynthetic process (13.3%) carbohydrate metabolic process (3%)" "cytoplasm (16.4%) cytosol (0.1%) protein-containing complex (0%)" "carbohydrate derivative binding (16.8%) D-sedoheptulose 7-phosphate isomerase activity (16.4%) zinc ion binding (16.3%)" "IPR001347 (20.1%) IPR046348 (20.1%) IPR050099 (20%)" "SIS domain (20.1%) SIS domain superfamily (20.1%) SIS family GmhA and DiaA subfamilies (20%)" DVNDYVAELAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.2 (100%) glucokinase (100%) "GO:0004340 (80%) GO:0016301 (20%)" "glucokinase activity (80%) kinase activity (20%)" "IPR000600 (33.3%) IPR043129 (33.3%) IPR049874 (33.3%)" "ROK family (33.3%) ATPase, nucleotide binding domain (33.3%) ROK, conserved site (33.3%)" LLNEHGEFLNAAEGQEVLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.4.2.10 (92.9%) 5.4.2.2 (7.1%)" "phosphoglucosamine mutase (92.9%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (7.1%)" "GO:0005975 (14%) GO:0006048 (14%) GO:0009252 (14%)" GO:0005829 (14%) "GO:0000287 (14%) GO:0004615 (14%) GO:0008966 (14%)" "carbohydrate metabolic process (14%) UDP-N-acetylglucosamine biosynthetic process (14%) peptidoglycan biosynthetic process (14%)" cytosol (14%) "magnesium ion binding (14%) phosphomannomutase activity (14%) phosphoglucosamine mutase activity (14%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" EIGHGNLAHR Pseudomonadati Bacteria Pseudomonadati 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.4%) GO:0006396 (13.5%) GO:0006935 (0.1%)" "GO:0005829 (14.4%) GO:0016020 (0.1%)" "GO:0000175 (14.4%) GO:0003723 (14.4%) GO:0004654 (14.4%)" "mRNA catabolic process (14.4%) RNA processing (13.5%) chemotaxis (0.1%)" "cytosol (14.4%) membrane (0.1%)" "3'-5'-RNA exonuclease activity (14.4%) RNA binding (14.4%) polyribonucleotide nucleotidyltransferase activity (14.4%)" "IPR001247 (8.2%) IPR012162 (8.2%) IPR020568 (8.2%)" "Exoribonuclease, phosphorolytic domain 1 (8.2%) Polyribonucleotide nucleotidyltransferase (8.2%) Ribosomal protein uS5 domain 2-type superfamily (8.2%)" SQTMPLYFDRPVGSGGSQPQFAEK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 3.2.1.1 (100%) alpha-amylase (100%) GO:0005975 (32%) "GO:0004556 (32%) GO:0043169 (32%) GO:2001070 (4%)" carbohydrate metabolic process (32%) "alpha-amylase activity (32%) cation binding (32%) starch binding (4%)" "IPR006046 (14%) IPR006047 (14%) IPR013780 (14%)" "Alpha amylase (14%) Glycosyl hydrolase family 13, catalytic domain (14%) Glycosyl hydrolase, all-beta (14%)" NDDLLNSFWLLDSEKGEAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006950 (0.1%) "GO:0005829 (47.6%) GO:0005737 (0.1%)" "GO:0008861 (47.6%) GO:0016829 (3.9%) GO:0003824 (0.6%)" response to stress (0.1%) "cytosol (47.6%) cytoplasm (0.1%)" "formate C-acetyltransferase activity (47.6%) lyase activity (3.9%) catalytic activity (0.6%)" "IPR001150 (25.2%) IPR011140 (24.9%) IPR050244 (24.9%)" "Glycine radical domain (25.2%) Autonomous glycyl radical cofactor GrcA (24.9%) Autonomous Glycyl Radical Cofactor (24.9%)" RFGEAFDEAQFR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.7%) GO:0015966 (12%) GO:0044281 (0.7%)" "GO:0005737 (12.7%) GO:0070062 (12%) GO:1990742 (12%)" "GO:0004820 (12.7%) GO:0005524 (12.7%) GO:0004081 (12%)" "glycyl-tRNA aminoacylation (12.7%) diadenosine tetraphosphate biosynthetic process (12%) small molecule metabolic process (0.7%)" "cytoplasm (12.7%) extracellular exosome (12%) microvesicle (12%)" "glycine-tRNA ligase activity (12.7%) ATP binding (12.7%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12%)" "IPR002314 (11.1%) IPR002315 (11.1%) IPR004154 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Glycyl-tRNA synthetase (11.1%) Anticodon-binding (11.1%)" MNIYTVGAATQGLSNYLKK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "5.4.2.2 (72.7%) 5.4.2.- (18.2%) 1.1.1.133 (4.5%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (72.7%) Phosphotransferases (phosphomutases) (18.2%) dTDP-4-dehydrorhamnose reductase (4.5%)" "GO:0005975 (24.1%) GO:0006166 (24.1%)" "GO:0000287 (24.1%) GO:0008973 (24.1%) GO:0004614 (3.5%)" "carbohydrate metabolic process (24.1%) purine ribonucleoside salvage (24.1%)" "magnesium ion binding (24.1%) phosphopentomutase activity (24.1%) phosphoglucomutase activity (3.5%)" "IPR005844 (12.6%) IPR005845 (12.6%) IPR016055 (12.6%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (12.6%)" EAASHPDTVVLAVSKDLPFAHGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" VDTHNFYGTDSDYDDSTTDTATMR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0015891 (23.4%) GO:0006879 (0.2%) GO:0033214 (0.2%)" "GO:0009279 (26.6%) GO:0016020 (0.2%) GO:1902495 (0.2%)" "GO:0015344 (26.4%) GO:0038023 (22.8%)" "siderophore transport (23.4%) intracellular iron ion homeostasis (0.2%) siderophore-iron import into cell (0.2%)" "cell outer membrane (26.6%) membrane (0.2%) transmembrane transporter complex (0.2%)" "siderophore uptake transmembrane transporter activity (26.4%) signaling receptor activity (22.8%)" "IPR036942 (15.5%) IPR039426 (15.4%) IPR012910 (14.7%)" "TonB-dependent receptor-like, beta-barrel domain superfamily (15.5%) TonB-dependent receptor-like (15.4%) TonB-dependent receptor, plug domain (14.7%)" YSPVPGYPALR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.6.1.- (98.1%) 2.6.1.1 (1.9%)" "Transaminases (98.1%) aspartate transaminase (1.9%)" GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%) GO:0004069 (0.2%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%) L-aspartate:2-oxoglutarate aminotransferase activity (0.2%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" LMPGEEEVAENPR root 2.1.1.199 (100%) 16S rRNA (cytosine(1402)-N(4))-methyltransferase (100%) "GO:0070475 (31.7%) GO:0032259 (2.3%)" "GO:0005737 (31.7%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0071424 (31.7%) GO:0008168 (2.3%) GO:0042803 (0.1%)" "rRNA base methylation (31.7%) methylation (2.3%)" "cytoplasm (31.7%) cytosol (0.1%) membrane (0.1%)" "rRNA (cytosine-N4-)-methyltransferase activity (31.7%) methyltransferase activity (2.3%) protein homodimerization activity (0.1%)" "IPR029063 (34.1%) IPR002903 (33.9%) IPR023397 (32%)" "S-adenosyl-L-methionine-dependent methyltransferase superfamily (34.1%) Ribosomal RNA small subunit methyltransferase H (33.9%) S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily (32%)" EWVIVDATDQTLGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (19.9%) GO:0017148 (19.9%)" "GO:0022625 (19.9%) GO:0005840 (0.5%)" "GO:0003729 (19.9%) GO:0003735 (19.9%)" "translation (19.9%) negative regulation of translation (19.9%)" "cytosolic large ribosomal subunit (19.9%) ribosome (0.5%)" "mRNA binding (19.9%) structural constituent of ribosome (19.9%)" "IPR005822 (25%) IPR005823 (25%) IPR023563 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13, conserved site (25%)" AKEFIANPYDDENLPEKHRK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0015031 (33.3%) GO:0005886 (33.3%) GO:0022857 (33.3%) protein transport (33.3%) plasma membrane (33.3%) transmembrane transporter activity (33.3%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) ATTVPVGEDQEPMIEQTR Bacteria Bacteria 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (25.1%) GO:0005829 (24.8%) "GO:0004830 (25.1%) GO:0005524 (25.1%)" tryptophanyl-tRNA aminoacylation (25.1%) cytosol (24.8%) "tryptophan-tRNA ligase activity (25.1%) ATP binding (25.1%)" "IPR002305 (19.9%) IPR014729 (19.9%) IPR050203 (19.9%)" "Aminoacyl-tRNA synthetase, class Ic (19.9%) Rossmann-like alpha/beta/alpha sandwich fold (19.9%) Tryptophan--tRNA ligase (19.9%)" ASLSGTQTIKAELEQAK root 3.6.1.15 (100%) nucleoside-triphosphate phosphatase (100%) "GO:0034605 (17%) GO:0042026 (15.8%) GO:0006508 (0.3%)" "GO:0005829 (15.3%) GO:0005737 (1.7%) GO:0005759 (0%)" "GO:0005524 (17%) GO:0016887 (17%) GO:0042802 (15.3%)" "cellular response to heat (17%) protein refolding (15.8%) proteolysis (0.3%)" "cytosol (15.3%) cytoplasm (1.7%) mitochondrial matrix (0%)" "ATP binding (17%) ATP hydrolysis activity (17%) identical protein binding (15.3%)" "IPR027417 (8.6%) IPR050130 (8.6%) IPR041546 (8.6%)" "P-loop containing nucleoside triphosphate hydrolase (8.6%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%) ClpA/ClpB, AAA lid domain (8.6%)" IILFIDEIHTIVGAGK root "GO:0034605 (19.3%) GO:0042026 (17.8%) GO:0006508 (2.4%)" "GO:0005737 (19.1%) GO:0005829 (0.2%)" "GO:0005524 (19.3%) GO:0016887 (19.3%) GO:0008233 (2.4%)" "cellular response to heat (19.3%) protein refolding (17.8%) proteolysis (2.4%)" "cytoplasm (19.1%) cytosol (0.2%)" "ATP binding (19.3%) ATP hydrolysis activity (19.3%) peptidase activity (2.4%)" "IPR003959 (8.5%) IPR050130 (8.5%) IPR027417 (8.5%)" "ATPase, AAA-type, core (8.5%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.5%) P-loop containing nucleoside triphosphate hydrolase (8.5%)" VVFCGINPGLSSAGTGFPFAHPANR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "3.2.2.28 (98.7%) 3.2.2.- (1.3%)" "double-stranded uracil-DNA glycosylase (98.7%) Hydrolyzing N-glycosyl compounds (1.3%)" GO:0006285 (20.7%) GO:0005737 (18.7%) "GO:0004844 (20.7%) GO:0008263 (20.7%) GO:0003677 (18.8%)" base-excision repair, AP site formation (20.7%) cytoplasm (18.7%) "uracil DNA N-glycosylase activity (20.7%) pyrimidine-specific mismatch base pair DNA N-glycosylase activity (20.7%) DNA binding (18.8%)" "IPR005122 (25.6%) IPR015637 (25.6%) IPR036895 (25.6%)" "Uracil-DNA glycosylase-like (25.6%) Uracil DNA glycosylase family 2 (25.6%) Uracil-DNA glycosylase-like domain superfamily (25.6%)" IVQFFAQRPQVQER root 3.5.4.16 (100%) GTP cyclohydrolase I (100%) "GO:0046654 (14.3%) GO:0006729 (14.2%) GO:0006730 (14.2%)" "GO:0005737 (14.2%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003934 (14.3%) GO:0005525 (14.2%) GO:0008270 (14.2%)" "tetrahydrofolate biosynthetic process (14.3%) tetrahydrobiopterin biosynthetic process (14.2%) one-carbon metabolic process (14.2%)" "cytoplasm (14.2%) cytosol (0%) membrane (0%)" "GTP cyclohydrolase I activity (14.3%) GTP binding (14.2%) zinc ion binding (14.2%)" "IPR001474 (20%) IPR018234 (20%) IPR020602 (20%)" "GTP cyclohydrolase I (20%) GTP cyclohydrolase I, conserved site (20%) GTP cyclohydrolase I domain (20%)" AAPKPVTRPAAAPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.1.3.1 (100%) methylmalonyl-CoA carboxytransferase (100%) GO:0047154 (100%) methylmalonyl-CoA carboxytransferase activity (100%) "IPR000089 (25%) IPR001882 (25%) IPR011053 (25%)" "Biotin/lipoyl attachment (25%) Biotin-binding site (25%) Single hybrid motif (25%)" LSEKELPLTESLALTIDR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "5.4.2.11 (99.6%) 5.4.2.1 (0.4%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (99.6%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.4%)" "GO:0006096 (33.1%) GO:0006094 (33%) GO:0061621 (0.1%)" "GO:0005737 (0.1%) GO:0005829 (0.1%)" "GO:0004619 (32.6%) GO:0016868 (0.5%) GO:0016853 (0.4%)" "glycolytic process (33.1%) gluconeogenesis (33%) canonical glycolysis (0.1%)" "cytoplasm (0.1%) cytosol (0.1%)" "phosphoglycerate mutase activity (32.6%) intramolecular phosphotransferase activity (0.5%) isomerase activity (0.4%)" "IPR005952 (25.2%) IPR029033 (25.2%) IPR013078 (25.1%)" "Phosphoglycerate mutase 1 (25.2%) Histidine phosphatase superfamily (25.2%) Histidine phosphatase superfamily, clade-1 (25.1%)" NGSFVLEADNVVFR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR025347 (100%) Protein of unknown function DUF4251 (100%) TGANEAYIALIKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0016787 (94.7%) GO:0016491 (2.6%) GO:0016829 (2.6%)" "hydrolase activity (94.7%) oxidoreductase activity (2.6%) lyase activity (2.6%)" "IPR011989 (25.8%) IPR016024 (25.8%) IPR004155 (24.5%)" "Armadillo-like helical (25.8%) Armadillo-type fold (25.8%) PBS lyase HEAT-like repeat (24.5%)" FSQQHQPLLVSLESLGR root "3.5.2.6 (80%) 3.2.1.8 (20%)" "beta-lactamase (80%) endo-1,4-beta-xylanase (20%)" "GO:0030643 (22.6%) GO:0045936 (22.6%) GO:0006817 (22.5%)" "GO:0005737 (21.8%) GO:0005886 (0%)" "GO:0016787 (9.4%) GO:0042803 (0.2%) GO:0005524 (0.1%)" "intracellular phosphate ion homeostasis (22.6%) negative regulation of phosphate metabolic process (22.6%) phosphate ion transport (22.5%)" "cytoplasm (21.8%) plasma membrane (0%)" "hydrolase activity (9.4%) protein homodimerization activity (0.2%) ATP binding (0.1%)" "IPR026022 (33.2%) IPR028366 (33.2%) IPR038078 (33.2%)" "PhoU domain (33.2%) PhoU (33.2%) PhoU-like domain superfamily (33.2%)" IVPDMEALGVFTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (33.3%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (33.3%)" "IPR003741 (12.8%) IPR004452 (12.8%) IPR009051 (12.8%)" "LUD domain (12.8%) L-lactate oxidation iron-sulfur protein LutB/LldF (12.8%) Alpha-helical ferredoxin (12.8%)" VIPSIAYTEPEVAWVGLTEKEAK root "1.8.1.4 (99.8%) 1.-.-.- (0.1%) 1.8.1.7 (0.1%)" "dihydrolipoyl dehydrogenase (99.8%) Oxidoreductases (0.1%) glutathione-disulfide reductase (0.1%)" "GO:0006103 (20.3%) GO:0006979 (20.1%) GO:0006090 (0%)" "GO:0005737 (18.3%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0004148 (20.4%) GO:0050660 (20.4%) GO:0016491 (0.2%)" "2-oxoglutarate metabolic process (20.3%) response to oxidative stress (20.1%) pyruvate metabolic process (0%)" "cytoplasm (18.3%) cytosol (0%) plasma membrane (0%)" "dihydrolipoyl dehydrogenase (NADH) activity (20.4%) flavin adenine dinucleotide binding (20.4%) oxidoreductase activity (0.2%)" "IPR004099 (12.7%) IPR016156 (12.7%) IPR050151 (12.7%)" "Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.7%) FAD/NAD-linked reductase, dimerisation domain superfamily (12.7%) Class-I pyridine nucleotide-disulfide oxidoreductase (12.7%)" GSIGACSYPAK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (24.9%) "GO:0022625 (24.8%) GO:0005840 (0.2%) GO:1990904 (0.1%)" "GO:0003735 (24.9%) GO:0019843 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.8%) ribosome (0.2%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.9%) rRNA binding (24.9%)" "IPR000597 (25.1%) IPR009000 (25.1%) IPR019927 (25.1%)" "Large ribosomal subunit protein uL3 (25.1%) Translation protein, beta-barrel domain superfamily (25.1%) Large ribosomal subunit protein uL3, bacteria/organella (25.1%)" LFEEGAEDFILKPFNPEELR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.13.3 (100%) histidine kinase (100%) GO:0000160 (85.7%) GO:0016020 (7.1%) GO:0004673 (7.1%) phosphorelay signal transduction system (85.7%) membrane (7.1%) protein histidine kinase activity (7.1%) "IPR001789 (33.3%) IPR011006 (33.3%) IPR050595 (33.3%)" "Signal transduction response regulator, receiver domain (33.3%) CheY-like superfamily (33.3%) Bacterial response regulator (33.3%)" VVKPETAMNKEASIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR003489 (50%) IPR036567 (50%)" "Ribosome hibernation promoting factor/RaiA (50%) Ribosome hibernation promotion factor-like (50%)" EIVNKYFEELETK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" AEADKLFEEVGDRIDFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" ALHWVMCGAQPTDTVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" LSGLDIQTICSTHGPVWR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0009055 (22.2%) GO:0010181 (22.2%) GO:0016491 (22.2%)" "electron transfer activity (22.2%) FMN binding (22.2%) oxidoreductase activity (22.2%)" "IPR001226 (14.3%) IPR001279 (14.3%) IPR008254 (14.3%)" "Flavodoxin, conserved site (14.3%) Metallo-beta-lactamase (14.3%) Flavodoxin/nitric oxide synthase (14.3%)" FAELLGEVVVADTQANLK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (44.4%) GO:0004601 (18.5%) GO:0016491 (18.5%)" "iron ion binding (44.4%) peroxidase activity (18.5%) oxidoreductase activity (18.5%)" "IPR009040 (13.3%) IPR009078 (13.3%) IPR012347 (13.3%)" "Ferritin-like diiron domain (13.3%) Ferritin-like superfamily (13.3%) Ferritin-like (13.3%)" QIPANYQNDETIVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) GO:0017004 (25.4%) GO:0030313 (25.4%) "GO:0016209 (23.9%) GO:0016491 (23.9%) GO:0004601 (1.5%)" cytochrome complex assembly (25.4%) cell envelope (25.4%) "antioxidant activity (23.9%) oxidoreductase activity (23.9%) peroxidase activity (1.5%)" "IPR000866 (16.7%) IPR013766 (16.7%) IPR017937 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Thioredoxin, conserved site (16.7%)" MNTFGNIYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.3.5 (100%) chorismate synthase (100%) "GO:0008652 (16.7%) GO:0009073 (16.7%) GO:0009423 (16.7%)" GO:0005829 (16.7%) "GO:0004107 (16.7%) GO:0010181 (16.7%)" "amino acid biosynthetic process (16.7%) aromatic amino acid family biosynthetic process (16.7%) chorismate biosynthetic process (16.7%)" cytosol (16.7%) "chorismate synthase activity (16.7%) FMN binding (16.7%)" "IPR000453 (33.3%) IPR020541 (33.3%) IPR035904 (33.3%)" "Chorismate synthase (33.3%) Chorismate synthase, conserved site (33.3%) Chorismate synthase AroC superfamily (33.3%)" MSETLNAPVAYTFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "1.2.2.2 (66.7%) 1.2.5.1 (33.3%)" "Deleted entry (66.7%) pyruvate dehydrogenase (quinone) (33.3%)" GO:0019752 (25%) "GO:0000287 (25%) GO:0030976 (25%) GO:0003824 (20.3%)" carboxylic acid metabolic process (25%) "magnesium ion binding (25%) thiamine pyrophosphate binding (25%) catalytic activity (20.3%)" "IPR000399 (11.1%) IPR011766 (11.1%) IPR012000 (11.1%)" "TPP-binding enzyme, conserved site (11.1%) Thiamine pyrophosphate enzyme, TPP-binding (11.1%) Thiamine pyrophosphate enzyme, central domain (11.1%)" LYEGDQLKDIYTTPFGIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) "GO:0004553 (40.6%) GO:0004565 (9.4%)" carbohydrate metabolic process (50%) "hydrolase activity, hydrolyzing O-glycosyl compounds (40.6%) beta-galactosidase activity (9.4%)" "IPR006101 (7.7%) IPR006102 (7.7%) IPR006103 (7.7%)" "Glycoside hydrolase, family 2 (7.7%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.7%) Glycoside hydrolase family 2, catalytic domain (7.7%)" AFSFSPQVLVEK Pseudomonadati Bacteria Pseudomonadati "6.3.5.5 (95.6%) 6.3.4.16 (4.1%) 6.3.4.6 (0.3%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (95.6%) carbamoyl-phosphate synthase (ammonia) (4.1%) urea carboxylase (0.3%)" "GO:0006541 (14.2%) GO:0006221 (10.9%) GO:0006526 (10.8%)" GO:0005737 (14.2%) "GO:0004088 (14.2%) GO:0005524 (14.2%) GO:0046872 (14.1%)" "glutamine metabolic process (14.2%) pyrimidine nucleotide biosynthetic process (10.9%) L-arginine biosynthetic process (10.8%)" cytoplasm (14.2%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14.2%) ATP binding (14.2%) metal ion binding (14.1%)" "IPR005479 (10.2%) IPR011761 (10.2%) IPR005483 (10.1%)" "Carbamoyl phosphate synthase, ATP-binding domain (10.2%) ATP-grasp fold (10.2%) Carbamoyl phosphate synthase, CPSase domain (10.1%)" IVTEGDKSSVVNNPTGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0006412 (85.1%) "GO:0005840 (12.2%) GO:0005829 (1.4%)" GO:0043024 (1.4%) translation (85.1%) "ribosome (12.2%) cytosol (1.4%)" ribosomal small subunit binding (1.4%) IPR012607 (100%) Ribosome hibernation factor SRA (100%) QHPGHTVISYVNTTAAVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.5.1.72 (100%) quinolinate synthase (100%) GO:0034628 (20%) GO:0005829 (20%) "GO:0008987 (20%) GO:0046872 (20%) GO:0051539 (20%)" 'de novo' NAD+ biosynthetic process from L-aspartate (20%) cytosol (20%) "quinolinate synthetase A activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR003473 (33.3%) IPR023066 (33.3%) IPR036094 (33.3%)" "Quinolinate synthetase A (33.3%) Quinolinate synthase A, type 2 (33.3%) Quinolinate synthetase A superfamily (33.3%)" IKEDAQTLAAKLEGVALTIGAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000244 (14.3%) IPR009027 (14.3%) IPR020069 (14.3%)" "Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.3%) Large ribosomal subunit protein bL9, C-terminal (14.3%)" NGMDWMYANCSTTAQR root "1.1.1.86 (89.2%) 1.1.1.- (10.3%) 1.1.1.382 (0.4%)" "ketol-acid reductoisomerase (NADP(+)) (89.2%) With NAD(+) or NADP(+) as acceptor (10.3%) ketol-acid reductoisomerase (NAD(+)) (0.4%)" "GO:0009097 (20.6%) GO:0009099 (20.6%) GO:0000002 (0.1%)" "GO:0005759 (1%) GO:0005739 (0.1%) GO:0042645 (0.1%)" "GO:0004455 (20.6%) GO:0046872 (20.5%) GO:0016853 (16%)" "isoleucine biosynthetic process (20.6%) L-valine biosynthetic process (20.6%) obsolete mitochondrial genome maintenance (0.1%)" "mitochondrial matrix (1%) mitochondrion (0.1%) mitochondrial nucleoid (0.1%)" "ketol-acid reductoisomerase activity (20.6%) metal ion binding (20.5%) isomerase activity (16%)" "IPR000506 (16.7%) IPR013023 (16.7%) IPR008927 (16.7%)" "Ketol-acid reductoisomerase, C-terminal (16.7%) Ketol-acid reductoisomerase (16.7%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.7%)" NCVTTSDDPQER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.99.- (96.9%) 5.4.99.22 (3.1%)" "Transferring other groups (96.9%) 23S rRNA pseudouridine(2605) synthase (3.1%)" "GO:0000455 (32%) GO:0001522 (1%) GO:0006364 (1%)" "GO:0003723 (33%) GO:0120159 (32%) GO:0009982 (1%)" "enzyme-directed rRNA pseudouridine synthesis (32%) pseudouridine synthesis (1%) rRNA processing (1%)" "RNA binding (33%) rRNA pseudouridine synthase activity (32%) pseudouridine synthase activity (1%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" VTLKGNEIHTNGELPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" GITISTAHVEYETPNRHYAHVDCPGHADYVK root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (16.2%) GO:0032045 (6.5%) GO:0005737 (0.8%)" "GO:0003746 (17.9%) GO:0003924 (17.9%) GO:0005525 (17.9%)" "cytosol (16.2%) guanyl-nucleotide exchange factor complex (6.5%) cytoplasm (0.8%)" "translation elongation factor activity (17.9%) GTPase activity (17.9%) GTP binding (17.9%)" "IPR000795 (8.7%) IPR031157 (8.7%) IPR050055 (8.7%)" "Translational (tr)-type GTP-binding domain (8.7%) Tr-type G domain, conserved site (8.7%) Elongation factor Tu GTPase (8.7%)" GFAFVEMPETSEASNAIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0003723 (100%) RNA binding (100%) "IPR000504 (25%) IPR012677 (25%) IPR035979 (25%)" "RNA recognition motif domain (25%) Nucleotide-binding alpha-beta plait domain superfamily (25%) RNA-binding domain superfamily (25%)" LMMHHETSASVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.2.1.22 (72.2%) 3.2.1.20 (22.2%) 3.2.1.3 (5.6%)" "alpha-galactosidase (72.2%) alpha-glucosidase (22.2%) glucan 1,4-alpha-glucosidase (5.6%)" "GO:0030246 (56.4%) GO:0016787 (37.2%) GO:0004557 (4.5%)" "carbohydrate binding (56.4%) hydrolase activity (37.2%) alpha-galactosidase activity (4.5%)" "IPR019563 (14.3%) IPR052720 (14.3%) IPR013785 (14.3%)" "Glycosyl-hydrolase 97, catalytic domain (14.3%) Glycosyl Hydrolase Family 97 (14.3%) Aldolase-type TIM barrel (14.3%)" AHKEWSELPWVER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (25.3%) GO:0009898 (25.3%) "GO:0003842 (25.3%) GO:0004657 (24.2%)" L-proline catabolic process to L-glutamate (25.3%) cytoplasmic side of plasma membrane (25.3%) "L-glutamate gamma-semialdehyde dehydrogenase activity (25.3%) proline dehydrogenase activity (24.2%)" "IPR015590 (14.4%) IPR016160 (14.4%) IPR016161 (14.4%)" "Aldehyde dehydrogenase domain (14.4%) Aldehyde dehydrogenase, cysteine active site (14.4%) Aldehyde/histidinol dehydrogenase (14.4%)" IRPTAEELEAYGEPDFVCFNASK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17%) GO:0005829 (17%) "GO:0004612 (17%) GO:0005524 (17%) GO:0046872 (17%)" gluconeogenesis (17%) cytosol (17%) "phosphoenolpyruvate carboxykinase (ATP) activity (17%) ATP binding (17%) metal ion binding (17%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" LEKIPTNIYESAEEGSFAIAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.5%) GO:0006044 (32.5%)" "GO:0004342 (32.5%) GO:0016853 (2.5%)" "carbohydrate metabolic process (32.5%) N-acetylglucosamine metabolic process (32.5%)" "glucosamine-6-phosphate deaminase activity (32.5%) isomerase activity (2.5%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" FIVATEAGIIHEMQK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.5.1.72 (100%) quinolinate synthase (100%) GO:0034628 (19.7%) GO:0005829 (19.7%) "GO:0008987 (19.7%) GO:0046872 (19.7%) GO:0051539 (19.7%)" 'de novo' NAD+ biosynthetic process from L-aspartate (19.7%) cytosol (19.7%) "quinolinate synthetase A activity (19.7%) metal ion binding (19.7%) 4 iron, 4 sulfur cluster binding (19.7%)" "IPR003473 (33.3%) IPR023066 (33.3%) IPR036094 (33.3%)" "Quinolinate synthetase A (33.3%) Quinolinate synthase A, type 2 (33.3%) Quinolinate synthetase A superfamily (33.3%)" VIVFSPHPDDDVISMGGTLRR Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.5.99.6 (98.2%) 3.1.1.31 (1.8%)" "glucosamine-6-phosphate deaminase (98.2%) 6-phosphogluconolactonase (1.8%)" "GO:0005975 (32.3%) GO:0006044 (31.8%) GO:0006046 (0.8%)" "GO:0004342 (32.6%) GO:0016853 (1.4%) GO:0016787 (0.5%)" "carbohydrate metabolic process (32.3%) N-acetylglucosamine metabolic process (31.8%) N-acetylglucosamine catabolic process (0.8%)" "glucosamine-6-phosphate deaminase activity (32.6%) isomerase activity (1.4%) hydrolase activity (0.5%)" "IPR003737 (17.5%) IPR052960 (17.5%) IPR024078 (17.1%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (17.5%) Glucosamine-6-phosphate deaminase-like (17.5%) Putative deacetylase LmbE-like domain superfamily (17.1%)" SIEAIIYSMTPDER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) GO:0048500 (20%) "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (20%)" SRP-dependent cotranslational protein targeting to membrane (20%) signal recognition particle (20%) "GTPase activity (20%) GTP binding (20%) 7S RNA binding (20%)" "IPR004125 (11.6%) IPR022941 (11.6%) IPR036891 (11.6%)" "Signal recognition particle, SRP54 subunit, M-domain (11.6%) Signal recognition particle, SRP54 subunit (11.6%) Signal recognition particle, SRP54 subunit, M-domain superfamily (11.6%)" KVQEFLLNFGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" SINPDIPIIFLTAK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" IFRPEANAER root 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (16.9%) GO:0009098 (16.9%) GO:0009099 (16.9%)" "GO:0004084 (13.1%) GO:0052654 (8.9%) GO:0052655 (8.9%)" "isoleucine biosynthetic process (16.9%) L-leucine biosynthetic process (16.9%) L-valine biosynthetic process (16.9%)" "branched-chain-amino-acid transaminase activity (13.1%) L-leucine-2-oxoglutarate transaminase activity (8.9%) L-valine-2-oxoglutarate transaminase activity (8.9%)" "IPR001544 (15.5%) IPR005786 (15.5%) IPR036038 (15.5%)" "Aminotransferase class IV (15.5%) Branched-chain amino acid aminotransferase II (15.5%) Aminotransferase-like, PLP-dependent enzymes (15.5%)" NKVTDAEIAEVLAR root 3.6.1.15 (100%) nucleoside-triphosphate phosphatase (100%) "GO:0034605 (17.1%) GO:0042026 (15.7%) GO:0006508 (0.2%)" "GO:0005829 (15.2%) GO:0005737 (1.9%) GO:0005759 (0%)" "GO:0005524 (17.1%) GO:0016887 (17.1%) GO:0042802 (15.2%)" "cellular response to heat (17.1%) protein refolding (15.7%) proteolysis (0.2%)" "cytosol (15.2%) cytoplasm (1.9%) mitochondrial matrix (0%)" "ATP binding (17.1%) ATP hydrolysis activity (17.1%) identical protein binding (15.2%)" "IPR027417 (8.7%) IPR050130 (8.7%) IPR003959 (8.6%)" "P-loop containing nucleoside triphosphate hydrolase (8.7%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.7%) ATPase, AAA-type, core (8.6%)" MTKADIVNEIAK Bacteria Bacteria GO:0030261 (22.4%) GO:0005829 (25.9%) "GO:0003677 (25.9%) GO:0030527 (25.9%)" chromosome condensation (22.4%) cytosol (25.9%) "DNA binding (25.9%) structural constituent of chromatin (25.9%)" "IPR000119 (50%) IPR010992 (50%)" "Histone-like DNA-binding protein (50%) Integration host factor (IHF)-like DNA-binding domain superfamily (50%)" EGLTAMANTAFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" HGEMKPVIQK root 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.4%) GO:0006002 (14.1%)" "GO:0005829 (14.3%) GO:0005737 (0.1%)" "GO:0003872 (14.4%) GO:0047334 (14.4%) GO:0005524 (14.1%)" "response to glucose (14.4%) fructose 6-phosphate metabolic process (14.1%)" "cytosol (14.3%) cytoplasm (0.1%)" "6-phosphofructokinase activity (14.4%) diphosphate-fructose-6-phosphate 1-phosphotransferase activity (14.4%) ATP binding (14.1%)" "IPR035966 (25.4%) IPR000023 (24.9%) IPR011183 (24.9%)" "Phosphofructokinase superfamily (25.4%) Phosphofructokinase domain (24.9%) Pyrophosphate-dependent phosphofructokinase PfpB (24.9%)" GFGLENLNLQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (25%) GO:0005737 (25%) "GO:0004148 (25%) GO:0050660 (25%)" 2-oxoglutarate metabolic process (25%) cytoplasm (25%) "dihydrolipoyl dehydrogenase (NADH) activity (25%) flavin adenine dinucleotide binding (25%)" "IPR001100 (12.5%) IPR004099 (12.5%) IPR006258 (12.5%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (12.5%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.5%) Dihydrolipoamide dehydrogenase (12.5%)" ALQGEQGVVECAYVEGDGQYAR Bacteria Bacteria 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006099 (24.7%) GO:0006108 (24%) GO:0006096 (0.1%)" "GO:0005737 (24.9%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0030060 (24.9%) GO:0016491 (0.4%) GO:0016615 (0.1%)" "tricarboxylic acid cycle (24.7%) malate metabolic process (24%) glycolytic process (0.1%)" "cytoplasm (24.9%) cytosol (0.1%) membrane (0.1%)" "L-malate dehydrogenase (NAD+) activity (24.9%) oxidoreductase activity (0.4%) malate dehydrogenase activity (0.1%)" "IPR015955 (13.5%) IPR022383 (13.5%) IPR001252 (13%)" "Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (13.5%) Lactate/malate dehydrogenase, C-terminal (13.5%) Malate dehydrogenase, active site (13%)" GGTDGAQLSFK root "3.4.11.4 (99.6%) 3.-.-.- (0.2%) 3.4.11.- (0.2%)" "tripeptide aminopeptidase (99.6%) Hydrolases (0.2%) Aminopeptidases (0.2%)" "GO:0006508 (16.7%) GO:0043171 (15%) GO:0006518 (1.7%)" "GO:0005829 (16.1%) GO:0005737 (0.2%)" "GO:0045148 (16.9%) GO:0008237 (16.7%) GO:0008270 (16.7%)" "proteolysis (16.7%) peptide catabolic process (15%) peptide metabolic process (1.7%)" "cytosol (16.1%) cytoplasm (0.2%)" "tripeptide aminopeptidase activity (16.9%) metallopeptidase activity (16.7%) zinc ion binding (16.7%)" "IPR002933 (20.1%) IPR011650 (20%) IPR001261 (20%)" "Peptidase M20 (20.1%) Peptidase M20, dimerisation domain (20%) ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%)" LLISELKDADAAVLGASALGWEVRE Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (71.4%) GO:0004340 (28.6%)" "kinase activity (71.4%) glucokinase activity (28.6%)" "IPR000600 (34%) IPR049874 (34%) IPR043129 (31.9%)" "ROK family (34%) ROK, conserved site (34%) ATPase, nucleotide binding domain (31.9%)" FVAENENGNGLCK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.8.1.4 (100%) dihydrolipoyl dehydrogenase (100%) GO:0006103 (26.8%) GO:0005737 (19.5%) "GO:0004148 (26.8%) GO:0050660 (26.8%)" 2-oxoglutarate metabolic process (26.8%) cytoplasm (19.5%) "dihydrolipoyl dehydrogenase (NADH) activity (26.8%) flavin adenine dinucleotide binding (26.8%)" "IPR004099 (12.9%) IPR006258 (12.9%) IPR012999 (12.9%)" "Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (12.9%) Dihydrolipoamide dehydrogenase (12.9%) Pyridine nucleotide-disulphide oxidoreductase, class I, active site (12.9%)" TLVTLACTECK Coriobacteriia Bacteria Bacillati Actinomycetota Coriobacteriia GO:0006412 (19.9%) "GO:0005840 (20.3%) GO:0005737 (19.9%) GO:1990904 (19.9%)" GO:0003735 (19.9%) translation (19.9%) "ribosome (20.3%) cytoplasm (19.9%) ribonucleoprotein complex (19.9%)" structural constituent of ribosome (19.9%) "IPR001705 (25%) IPR011332 (25%) IPR018264 (25%)" "Large ribosomal subunit protein bL33 (25%) Zinc-binding ribosomal protein (25%) Large ribosomal subunit protein bL33, conserved site (25%)" HVVALSTDKACAPINLYGATK Bacteroidota Bacteria Pseudomonadati Bacteroidota "4.2.1.115 (80.9%) 4.2.1.- (14.9%) 5.1.3.2 (4.3%)" "UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (80.9%) Hydro-lyases (14.9%) UDP-glucose 4-epimerase (4.3%)" "GO:0016829 (95.6%) GO:0003978 (4.4%)" "lyase activity (95.6%) UDP-glucose 4-epimerase activity (4.4%)" "IPR003869 (25.1%) IPR036291 (25.1%) IPR051203 (25.1%)" "Polysaccharide biosynthesis protein, CapD-like domain (25.1%) NAD(P)-binding domain superfamily (25.1%) Polysaccharide Synthase-Related Protein (25.1%)" QLTGFEILNPDLVICR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.7%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.7%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011260 (16.7%) IPR011262 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.7%) DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" WEQKVDIALPCATQNELNEADAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006537 (26.3%) GO:0005829 (23.7%) "GO:0004354 (26.3%) GO:0000166 (23.7%)" glutamate biosynthetic process (26.3%) cytosol (23.7%) "glutamate dehydrogenase (NADP+) activity (26.3%) nucleotide binding (23.7%)" "IPR006095 (12.5%) IPR006096 (12.5%) IPR006097 (12.5%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.5%)" SICEDDKLDLALDIIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (32.1%) IPR015824 (32.1%) IPR036043 (32.1%)" "Phosphoglycerate kinase (32.1%) Phosphoglycerate kinase, N-terminal (32.1%) Phosphoglycerate kinase superfamily (32.1%)" QLLQETFEEMERR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0030649 (50%) GO:0034069 (50%) aminoglycoside antibiotic catabolic process (50%) aminoglycoside N-acetyltransferase activity (50%) "IPR000182 (33.3%) IPR016181 (33.3%) IPR051554 (33.3%)" "GNAT domain (33.3%) Acyl-CoA N-acyltransferase (33.3%) Acetyltransferase Eis (33.3%)" VVCQIVSSLVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR001787 (33.3%) IPR028909 (33.3%) IPR036164 (33.3%)" "Large ribosomal subunit protein bL21 (33.3%) Large ribosomal subunit protein bL21-like (33.3%) Large ribosomal subunit protein bL21-like superfamily (33.3%)" KGPFVDAHLQK Bacteria Bacteria "GO:0006412 (16.7%) GO:0000028 (16.6%)" "GO:0005737 (16.6%) GO:0015935 (16.6%) GO:0005840 (0.2%)" "GO:0003735 (16.7%) GO:0019843 (16.6%)" "translation (16.7%) ribosomal small subunit assembly (16.6%)" "cytoplasm (16.6%) small ribosomal subunit (16.6%) ribosome (0.2%)" "structural constituent of ribosome (16.7%) rRNA binding (16.6%)" "IPR002222 (25.1%) IPR023575 (25.1%) IPR005732 (24.9%)" "Small ribosomal subunit protein uS19 (25.1%) Small ribosomal subunit protein uS19, superfamily (25.1%) Small ribosomal subunit protein uS19, bacteria (24.9%)" AIPQLEVARPADAYETAEAYR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0000287 (25%) GO:0004802 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "magnesium ion binding (25%) transketolase activity (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR005478 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase, bacterial-like (12.5%)" FLCAGTVAENVAFSLSHLKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR001509 (50%) IPR036291 (50%)" "NAD-dependent epimerase/dehydratase (50%) NAD(P)-binding domain superfamily (50%)" GKYKPNFTPHVDCGDNVIIINADKVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (19.9%) GO:0017148 (19.9%)" "GO:0022625 (19.9%) GO:0005840 (0.4%)" "GO:0003729 (19.9%) GO:0003735 (19.9%)" "translation (19.9%) negative regulation of translation (19.9%)" "cytosolic large ribosomal subunit (19.9%) ribosome (0.4%)" "mRNA binding (19.9%) structural constituent of ribosome (19.9%)" "IPR005822 (25.2%) IPR005823 (25.2%) IPR036899 (25.2%)" "Large ribosomal subunit protein uL13 (25.2%) Large ribosomal subunit protein uL13, bacteria (25.2%) Large ribosomal subunit protein uL13 superfamily (25.2%)" RGFKLDVDKLGALEER Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 6.1.1.11 (100%) serine--tRNA ligase (100%) "GO:0006434 (19.2%) GO:0016260 (18.6%) GO:0006412 (1.1%)" "GO:0005737 (19%) GO:0005829 (0.2%)" "GO:0004828 (20.1%) GO:0005524 (19.9%) GO:0016874 (0.8%)" "seryl-tRNA aminoacylation (19.2%) selenocysteine biosynthetic process (18.6%) translation (1.1%)" "cytoplasm (19%) cytosol (0.2%)" "serine-tRNA ligase activity (20.1%) ATP binding (19.9%) ligase activity (0.8%)" "IPR010978 (13%) IPR015866 (13%) IPR042103 (13%)" "Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm (13%) Serine-tRNA synthetase, type1, N-terminal (13%) Serine-tRNA synthetase, type1, N-terminal domain superfamily (13%)" SVLSGVPAALPSLIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.6.1.8 (91.9%) 3.6.1.9 (8.1%)" "ATP diphosphatase (91.9%) nucleotide diphosphatase (8.1%)" "GO:0006203 (12.6%) GO:0046047 (12.6%) GO:0046052 (12.6%)" "GO:0047429 (10.5%) GO:0047693 (2.1%)" "dGTP catabolic process (12.6%) TTP catabolic process (12.6%) UTP catabolic process (12.6%)" "nucleoside triphosphate diphosphatase activity (10.5%) ATP diphosphatase activity (2.1%)" "IPR004518 (25%) IPR011551 (25%) IPR048011 (25%)" "NTP pyrophosphohydrolase MazG-like domain (25%) NTP pyrophosphohydrolase MazG (25%) MazG-like, C-terminal domain (25%)" ALVSHPREPLSR root "GO:0045893 (18.9%) GO:0006355 (1.3%) GO:0000160 (0.6%)" "GO:0005829 (19.5%) GO:0032993 (19.5%) GO:0005737 (0%)" "GO:0000976 (19.6%) GO:0000156 (19.5%) GO:0003677 (0.7%)" "positive regulation of DNA-templated transcription (18.9%) regulation of DNA-templated transcription (1.3%) phosphorelay signal transduction system (0.6%)" "cytosol (19.5%) protein-DNA complex (19.5%) cytoplasm (0%)" "transcription cis-regulatory region binding (19.6%) phosphorelay response regulator activity (19.5%) DNA binding (0.7%)" "IPR001867 (16.9%) IPR016032 (16.9%) IPR036388 (16.9%)" "OmpR/PhoB-type DNA-binding domain (16.9%) Signal transduction response regulator, C-terminal effector (16.9%) Winged helix-like DNA-binding domain superfamily (16.9%)" IYAEVAGVGMSADAHHLTASHPEGLGAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.2%) GO:0005829 (33.2%) "GO:0004315 (33.2%) GO:0016746 (0.4%)" fatty acid biosynthetic process (33.2%) cytosol (33.2%) "3-oxoacyl-[acyl-carrier-protein] synthase activity (33.2%) acyltransferase activity (0.4%)" "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" NTPNVIGFLGGSDKPVPLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006353 (20%) GO:0006354 (20%) GO:0031564 (20%)" GO:0005829 (20%) "DNA-templated transcription termination (20%) DNA-templated transcription elongation (20%) transcription antitermination (20%)" cytosol (20%) "IPR001062 (12.5%) IPR005824 (12.5%) IPR006645 (12.5%)" "Transcription antitermination protein, NusG (12.5%) KOW (12.5%) NusG-like, N-terminal (12.5%)" LLGTSAWYAPGAAGAYVVESIIHNQKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (26.3%) GO:0006099 (23.5%)" "GO:0004459 (26.3%) GO:0030060 (23%) GO:0016491 (0.5%)" "lactate metabolic process (26.3%) tricarboxylic acid cycle (23.5%)" "L-lactate dehydrogenase (NAD+) activity (26.3%) L-malate dehydrogenase (NAD+) activity (23%) oxidoreductase activity (0.5%)" "IPR015955 (17.2%) IPR022383 (17.2%) IPR001236 (16.9%)" "Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (17.2%) Lactate/malate dehydrogenase, C-terminal (17.2%) Lactate/malate dehydrogenase, N-terminal (16.9%)" TTLTESLLFESGIIKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" TDYEKLVLEITTDGSIHPK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.6%) "GO:0000428 (16.9%) GO:0005737 (16.4%)" "GO:0003677 (16.6%) GO:0003899 (16.6%) GO:0046983 (16.6%)" DNA-templated transcription (16.6%) "DNA-directed RNA polymerase complex (16.9%) cytoplasm (16.4%)" "DNA binding (16.6%) DNA-directed RNA polymerase activity (16.6%) protein dimerization activity (16.6%)" "IPR011260 (16.9%) IPR011263 (16.9%) IPR011262 (16.6%)" "RNA polymerase, alpha subunit, C-terminal (16.9%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.9%) DNA-directed RNA polymerase, insert domain (16.6%)" LTNQKEVNSYIPGEGHNLQEHSIVLVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20.3%) "GO:0015935 (20.3%) GO:0005840 (0.1%)" "GO:0003735 (20.3%) GO:0019843 (20.3%) GO:0000049 (18.7%)" translation (20.3%) "small ribosomal subunit (20.3%) ribosome (0.1%)" "structural constituent of ribosome (20.3%) rRNA binding (20.3%) tRNA binding (18.7%)" "IPR005679 (33.3%) IPR006032 (33.3%) IPR012340 (33.3%)" "Ribosomal protein uS12, bacteria (33.3%) Small ribosomal subunit protein uS12 (33.3%) Nucleic acid-binding, OB-fold (33.3%)" SGSEENALAMLAMTAFTLMTR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae NARPGYLEHFWALVNWEFVAK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0000303 (0.3%) GO:0006801 (0.3%) GO:0019430 (0.3%)" "GO:0005737 (30.9%) GO:0005829 (0.3%) GO:0016020 (0.3%)" "GO:0004784 (33%) GO:0046914 (30.3%) GO:0046872 (2.4%)" "response to superoxide (0.3%) superoxide metabolic process (0.3%) removal of superoxide radicals (0.3%)" "cytoplasm (30.9%) cytosol (0.3%) membrane (0.3%)" "superoxide dismutase activity (33%) transition metal ion binding (30.3%) metal ion binding (2.4%)" "IPR019832 (17%) IPR036314 (17%) IPR019833 (16.7%)" "Manganese/iron superoxide dismutase, C-terminal (17%) Manganese/iron superoxide dismutase, C-terminal domain superfamily (17%) Manganese/iron superoxide dismutase, binding site (16.7%)" VKGDQMGMLATVINSLALSSALVAQGVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.4.22 (100%) UMP kinase (100%) "GO:0006225 (20%) GO:0044210 (20%)" GO:0005737 (20%) "GO:0005524 (20%) GO:0033862 (20%)" "UDP biosynthetic process (20%) 'de novo' CTP biosynthetic process (20%)" cytoplasm (20%) "ATP binding (20%) UMP kinase activity (20%)" "IPR001048 (25%) IPR011817 (25%) IPR015963 (25%)" "Aspartate/glutamate/uridylate kinase (25%) Uridylate kinase (25%) Uridylate kinase, bacteria (25%)" ALSAGDKISLVGFGTFSVAER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" ETQQQTASTTTSQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033103 (50%) GO:0033104 (50%) protein secretion by the type VI secretion system (50%) type VI protein secretion system complex (50%) IPR035576 (100%) Type VI secretion system TssC (100%) YNLNYSVLATPAEGLSGR Bacteria Bacteria "1.17.4.2 (98.5%) 1.1.98.6 (1.5%)" "ribonucleoside-triphosphate reductase (thioredoxin) (98.5%) ribonucleoside-triphosphate reductase (formate) (1.5%)" "GO:0006260 (16.7%) GO:0009265 (16.7%)" GO:0031250 (16.7%) "GO:0008998 (16.7%) GO:0004748 (16.5%) GO:0005524 (16.2%)" "DNA replication (16.7%) 2'-deoxyribonucleotide biosynthetic process (16.7%)" anaerobic ribonucleoside-triphosphate reductase complex (16.7%) "ribonucleoside-triphosphate reductase (thioredoxin) activity (16.7%) ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.5%) ATP binding (16.2%)" "IPR012833 (50.6%) IPR005144 (49.4%)" "Ribonucleoside-triphosphate reductase, anaerobic (50.6%) ATP-cone domain (49.4%)" QLTLDRDPHGNVQVSLIETEK root 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.4%) GO:0006002 (14.1%)" "GO:0005829 (14.3%) GO:0005737 (0.1%)" "GO:0003872 (14.4%) GO:0047334 (14.4%) GO:0005524 (14.1%)" "response to glucose (14.4%) fructose 6-phosphate metabolic process (14.1%)" "cytosol (14.3%) cytoplasm (0.1%)" "6-phosphofructokinase activity (14.4%) diphosphate-fructose-6-phosphate 1-phosphotransferase activity (14.4%) ATP binding (14.1%)" "IPR035966 (25.4%) IPR000023 (24.9%) IPR011183 (24.9%)" "Phosphofructokinase superfamily (25.4%) Phosphofructokinase domain (24.9%) Pyrophosphate-dependent phosphofructokinase PfpB (24.9%)" KMTTIDKLTADGTYSNLSKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (32.7%) "GO:0022627 (32.7%) GO:0005840 (1.9%)" GO:0003735 (32.7%) translation (32.7%) "cytosolic small ribosomal subunit (32.7%) ribosome (1.9%)" structural constituent of ribosome (32.7%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" ASFHEAEPGYTYNIIIDPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.1.1.- (100%) Methyltransferases (100%) GO:0032259 (25.5%) "GO:0005737 (25.5%) GO:0005840 (23.6%)" "GO:0008276 (21.8%) GO:0016279 (3.6%)" methylation (25.5%) "cytoplasm (25.5%) ribosome (23.6%)" "protein methyltransferase activity (21.8%) protein-lysine N-methyltransferase activity (3.6%)" "IPR004498 (33.3%) IPR029063 (33.3%) IPR050078 (33.3%)" "Ribosomal protein L11 methyltransferase (33.3%) S-adenosyl-L-methionine-dependent methyltransferase superfamily (33.3%) Ribosomal protein L11 methyltransferase PrmA (33.3%)" WGSDKDGNPFNWSTNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR012910 (12.9%) IPR023996 (12.9%) IPR023997 (12.9%)" "TonB-dependent receptor, plug domain (12.9%) TonB-dependent outer membrane protein, SusC/RagA (12.9%) TonB-dependent outer membrane protein SusC/RagA, conserved site (12.9%)" VIKDFMVQAGDPESK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (48.6%) "GO:0003755 (48.6%) GO:0016853 (2.9%)" protein folding (48.6%) "peptidyl-prolyl cis-trans isomerase activity (48.6%) isomerase activity (2.9%)" "IPR002130 (25%) IPR020892 (25%) IPR029000 (25%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (25%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (25%) Cyclophilin-like domain superfamily (25%)" AIIDFPAVYDMLSIMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.8.- (25%) 1.3.8.1 (25%) 1.3.8.7 (25%)" "With a flavin as acceptor (25%) short-chain acyl-CoA dehydrogenase (25%) medium-chain acyl-CoA dehydrogenase (25%)" "GO:0050660 (49.1%) GO:0003995 (47.2%) GO:0016937 (1.9%)" "flavin adenine dinucleotide binding (49.1%) acyl-CoA dehydrogenase activity (47.2%) short-chain fatty acyl-CoA dehydrogenase activity (1.9%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009075 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.1%)" LTGTNGNMGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.2.1.5 (95.5%) 6.2.1.- (4.5%)" "succinate--CoA ligase (ADP-forming) (95.5%) Acid--thiol ligases (4.5%)" "GO:0006099 (13.2%) GO:0006104 (13.2%)" "GO:0005829 (13.2%) GO:0042709 (13.2%)" "GO:0000287 (13.2%) GO:0004775 (13.2%) GO:0005524 (13.2%)" "tricarboxylic acid cycle (13.2%) succinyl-CoA metabolic process (13.2%)" "cytosol (13.2%) succinate-CoA ligase complex (13.2%)" "magnesium ion binding (13.2%) succinate-CoA ligase (ADP-forming) activity (13.2%) ATP binding (13.2%)" "IPR005809 (16.7%) IPR005811 (16.7%) IPR013650 (16.7%)" "Succinate--CoA ligase-like, beta subunit (16.7%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (16.7%) ATP-grasp fold, succinyl-CoA synthetase-type (16.7%)" DILFFIDNIFR root "7.1.2.2 (99.6%) 3.6.3.14 (0.4%)" "H(+)-transporting two-sector ATPase (99.6%) Transferred entry: 7.1.2.2 (0.4%)" "GO:0045259 (23.8%) GO:0005886 (22.8%)" "GO:0005524 (23.8%) GO:0046933 (23.8%) GO:0016787 (5.3%)" "proton-transporting ATP synthase complex (23.8%) plasma membrane (22.8%)" "ATP binding (23.8%) proton-transporting ATP synthase activity, rotational mechanism (23.8%) hydrolase activity (5.3%)" "IPR000194 (10.1%) IPR050053 (10.1%) IPR027417 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%) ATPase alpha/beta chains (10.1%) P-loop containing nucleoside triphosphate hydrolase (10%)" YRPGDKVELTINR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.4.21.107 (66.7%) 3.4.21.- (33.3%)" "peptidase Do (66.7%) Serine endopeptidases (33.3%)" GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001478 (17%) IPR001940 (17%) IPR009003 (17%)" "PDZ domain (17%) Peptidase S1C (17%) Peptidase S1, PA clan (17%)" AAGAELVGMEDLADQIKKGEMNFDVVIASPDAMR root "GO:0006417 (16.6%) GO:0006412 (16.5%) GO:0000027 (0%)" "GO:0022625 (16.6%) GO:0005840 (0.3%) GO:0005737 (0%)" "GO:0000049 (16.6%) GO:0003735 (16.5%) GO:0019843 (16.5%)" "regulation of translation (16.6%) translation (16.5%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (16.6%) ribosome (0.3%) cytoplasm (0%)" "tRNA binding (16.6%) structural constituent of ribosome (16.5%) rRNA binding (16.5%)" "IPR023674 (16.7%) IPR028364 (16.7%) IPR016095 (16.7%)" "Ribosomal protein uL1-like (16.7%) Ribosomal protein uL1/ribosomal biogenesis protein (16.7%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" YTGEDSEPELIKEDLNYQFVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (16%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (16%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" EIYEQPNAIKNTLTGR root 2.6.1.16 (100%) glutamine--fructose-6-phosphate transaminase (isomerizing) (100%) "GO:0006002 (12.6%) GO:0006487 (12.6%) GO:0006047 (12.6%)" GO:0005829 (12.6%) "GO:0004360 (12.6%) GO:0097367 (12.6%) GO:0008483 (0.2%)" "fructose 6-phosphate metabolic process (12.6%) protein N-linked glycosylation (12.6%) UDP-N-acetylglucosamine metabolic process (12.6%)" cytosol (12.6%) "glutamine-fructose-6-phosphate transaminase (isomerizing) activity (12.6%) carbohydrate derivative binding (12.6%) transaminase activity (0.2%)" "IPR046348 (12.6%) IPR001347 (12.6%) IPR035466 (12.6%)" "SIS domain superfamily (12.6%) SIS domain (12.6%) GlmS/AgaS, SIS domain 1 (12.6%)" SRIGAPADQKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.2%) "GO:0022625 (33.2%) GO:0005840 (0.4%)" GO:0003735 (33.2%) translation (33.2%) "cytosolic large ribosomal subunit (33.2%) ribosome (0.4%)" structural constituent of ribosome (33.2%) "IPR005996 (33.2%) IPR016082 (33.2%) IPR036919 (33.2%)" "Large ribosomal subunit protein uL30, bacteria (33.2%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (33.2%) Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily (33.2%)" ITDIMFAGTDEDLRQTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0006633 (33%) GO:0005829 (33%) "GO:0004314 (33%) GO:0016740 (0.9%)" fatty acid biosynthetic process (33%) cytosol (33%) "[acyl-carrier-protein] S-malonyltransferase activity (33%) transferase activity (0.9%)" "IPR001227 (14.4%) IPR014043 (14.4%) IPR016035 (14.4%)" "Acyl transferase domain superfamily (14.4%) Acyl transferase domain (14.4%) Acyl transferase/acyl hydrolase/lysophospholipase (14.4%)" DVEGPTYDEAVHQQIEEVQAKNPTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0044281 (33.3%) "GO:0016625 (33.3%) GO:0030976 (33.3%)" small molecule metabolic process (33.3%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (33.3%) thiamine pyrophosphate binding (33.3%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" DKLNETFDAQSEEATLENMHAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR027304 (33.3%) IPR046357 (33.3%) IPR052029 (33.3%)" "Trigger factor/SurA domain superfamily (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) Periplasmic chaperone PpiD (33.3%)" VPTSDVSVVDLTVVLEK root "1.2.1.- (94.9%) 1.2.1.12 (5.1%)" "With NAD(+) or NADP(+) as acceptor (94.9%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (5.1%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" "GO:0005737 (16.2%) GO:0005829 (0.5%)" "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (10.8%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" "cytoplasm (16.2%) cytosol (0.5%)" "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (10.8%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" IGDTVEVYIENQEDKKGQLILSHKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" IVSFVNTTENPPVER Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (32.8%) GO:1902600 (32.8%)" "GO:0005524 (32.8%) GO:0016787 (1.5%)" "ATP metabolic process (32.8%) proton transmembrane transport (32.8%)" "ATP binding (32.8%) hydrolase activity (1.5%)" "IPR000194 (20%) IPR004100 (20%) IPR022879 (20%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (20%) V-type ATP synthase regulatory subunit B/beta (20%)" EVKPHQIFVAGDLADPHGTHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.2%) GO:0006044 (32.2%)" "GO:0004342 (32.6%) GO:0016853 (3%)" "carbohydrate metabolic process (32.2%) N-acetylglucosamine metabolic process (32.2%)" "glucosamine-6-phosphate deaminase activity (32.6%) isomerase activity (3%)" "IPR024078 (15.3%) IPR052960 (15.3%) IPR003737 (15%)" "Putative deacetylase LmbE-like domain superfamily (15.3%) Glucosamine-6-phosphate deaminase-like (15.3%) N-acetylglucosaminyl phosphatidylinositol deacetylase-related (15%)" NDQTNGELVLDNNDLERER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0009409 (9.9%) GO:0010467 (9.6%) GO:0000027 (9.3%)" "GO:0005829 (10.6%) GO:1990904 (10.6%)" "GO:0003924 (10.6%) GO:0005525 (10.6%) GO:0000049 (9.3%)" "response to cold (9.9%) gene expression (9.6%) ribosomal large subunit assembly (9.3%)" "cytosol (10.6%) ribonucleoprotein complex (10.6%)" "GTPase activity (10.6%) GTP binding (10.6%) tRNA binding (9.3%)" "IPR000795 (6.9%) IPR005225 (6.9%) IPR027417 (6.9%)" "Translational (tr)-type GTP-binding domain (6.9%) Small GTP-binding domain (6.9%) P-loop containing nucleoside triphosphate hydrolase (6.9%)" SVVAVVPYFGWAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" FNSDINLEYKGK Bacilli Bacteria Bacillati Bacillota Bacilli 2.7.11.- (100%) Protein-serine/threonine kinases (100%) GO:0009401 (47.3%) GO:0005737 (47.3%) GO:0016740 (5.3%) phosphoenolpyruvate-dependent sugar phosphotransferase system (47.3%) cytoplasm (47.3%) transferase activity (5.3%) "IPR000032 (20.1%) IPR002114 (20.1%) IPR035895 (20.1%)" "Phosphocarrier protein HPr-like (20.1%) Phosphotransferase system, HPr serine phosphorylation site (20.1%) HPr-like superfamily (20.1%)" GPLDPEIVALAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.1.3.1 (100%) methylmalonyl-CoA carboxytransferase (100%) GO:0006094 (4.8%) GO:0005737 (4.8%) "GO:0003824 (76.2%) GO:0047154 (9.5%) GO:0004736 (4.8%)" gluconeogenesis (4.8%) cytoplasm (4.8%) "catalytic activity (76.2%) methylmalonyl-CoA carboxytransferase activity (9.5%) pyruvate carboxylase activity (4.8%)" "IPR000891 (25%) IPR003379 (25%) IPR013785 (25%)" "Pyruvate carboxyltransferase (25%) Carboxylase, conserved domain (25%) Aldolase-type TIM barrel (25%)" LASYADCYVNDAFGTAHR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" TLDQLPDSCAASAAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" THAGSFDDLEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides TQLCHTLNGSALALPR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (25%) GO:0005737 (25%) "GO:0004828 (25%) GO:0005524 (25%)" seryl-tRNA aminoacylation (25%) cytoplasm (25%) "serine-tRNA ligase activity (25%) ATP binding (25%)" "IPR002314 (13%) IPR002317 (13%) IPR006195 (13%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (13%) Serine-tRNA ligase, type1 (13%) Aminoacyl-tRNA synthetase, class II (13%)" GYEPNSFGEWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" GO:0005737 (16.7%) "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16.7%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" cytoplasm (16.7%) "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16.7%)" "IPR002226 (12.5%) IPR010582 (12.5%) IPR011614 (12.5%)" "Catalase haem-binding site (12.5%) Catalase immune-responsive domain (12.5%) Catalase core domain (12.5%)" SLLTSTLHSYFAGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0110001 (6.7%) "GO:0005524 (80%) GO:0004540 (6.7%) GO:0016787 (6.7%)" toxin-antitoxin complex (6.7%) "ATP binding (80%) RNA nuclease activity (6.7%) hydrolase activity (6.7%)" "IPR018631 (34.1%) IPR027417 (33%) IPR012547 (31.8%)" "AAA-ATPase-like domain (34.1%) P-loop containing nucleoside triphosphate hydrolase (33%) PD-(D/E)XK nuclease superfamily 9 (31.8%)" AEVNKLTGPIKGNAGVYMIQVYNK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (60%) "GO:0016853 (35%) GO:0003755 (5%)" plasma membrane (60%) "isomerase activity (35%) peptidyl-prolyl cis-trans isomerase activity (5%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" NNEIPAVLYGGEKVTHFTVTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" IFEDVAKAEER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.2%) "GO:0022627 (22.7%) GO:0005840 (2.5%) GO:1990904 (1.4%)" "GO:0003729 (24.2%) GO:0003735 (24.2%) GO:0003676 (0.4%)" translation (24.2%) "cytosolic small ribosomal subunit (22.7%) ribosome (2.5%) ribonucleoprotein complex (1.4%)" "mRNA binding (24.2%) structural constituent of ribosome (24.2%) nucleic acid binding (0.4%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (24.6%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (24.6%)" ILDIFEATTGGR Bacteria Bacteria "7.1.1.- (95.8%) 1.6.5.11 (4.2%)" "Hydron translocation or charge separation linked to oxidoreductase reactions (95.8%) Transferred entry: 1.6.5.9 (4.2%)" "GO:0005886 (15.4%) GO:0030964 (9%) GO:0005737 (8.3%)" "GO:0048038 (16.7%) GO:0051287 (16.7%) GO:0008137 (15.4%)" "plasma membrane (15.4%) NADH dehydrogenase complex (9%) cytoplasm (8.3%)" "quinone binding (16.7%) NAD binding (16.7%) NADH dehydrogenase (ubiquinone) activity (15.4%)" "IPR001135 (17.3%) IPR029014 (17.3%) IPR001268 (16%)" "NADH-quinone oxidoreductase, subunit D (17.3%) [NiFe]-hydrogenase, large subunit (17.3%) NADH:ubiquinone oxidoreductase, 30kDa subunit (16%)" ITGRPHGLFDYYGAEDAERVIIAMGSVTEAAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.1 (60%) 1.2.1.51 (20%) 1.2.7.- (20%)" "pyruvate synthase (60%) pyruvate dehydrogenase (NADP(+)) (20%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (11.3%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (11.3%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" LLATHYQQTNLDWYNSR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0015920 (22.6%) GO:0043165 (22.6%) GO:0061024 (3.2%)" "GO:0009279 (25.6%) GO:1990351 (25.6%) GO:0019867 (0.2%)" "lipopolysaccharide transport (22.6%) Gram-negative-bacterium-type cell outer membrane assembly (22.6%) membrane organization (3.2%)" "cell outer membrane (25.6%) transporter complex (25.6%) outer membrane (0.2%)" "IPR007543 (26.8%) IPR050218 (26.6%) IPR020889 (23.5%)" "LptD, C-terminal (26.8%) Lipopolysaccharide Assembly Protein LptD (26.6%) LPS-assembly protein LptD (23.5%)" TNTFGAVFR Bacteria Bacteria 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.1%) GO:0005737 (19.2%) "GO:0005524 (20.1%) GO:0003676 (20%) GO:0004816 (20%)" asparaginyl-tRNA aminoacylation (20.1%) cytoplasm (19.2%) "ATP binding (20.1%) nucleic acid binding (20%) asparagine-tRNA ligase activity (20%)" "IPR004364 (14.4%) IPR045864 (14.4%) IPR004365 (14.3%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (14.4%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.4%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (14.3%)" MNKIDFLDLFAINQR Escherichia coli Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli 2.6.1.- (100%) Transaminases (100%) GO:0000271 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" polysaccharide biosynthetic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000653 (25%) IPR015421 (25%) IPR015422 (25%)" "DegT/DnrJ/EryC1/StrS aminotransferase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%) Pyridoxal phosphate-dependent transferase, small domain (25%)" GSASHEMVDKVVEATR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.8 (100%) phosphate acetyltransferase (100%) "GO:0016407 (53.1%) GO:0008959 (46.9%)" "acetyltransferase activity (53.1%) phosphate acetyltransferase activity (46.9%)" "IPR002505 (16.7%) IPR004614 (16.7%) IPR012147 (16.7%)" "Phosphate acetyl/butaryl transferase (16.7%) Phosphate acetyltransferase (16.7%) Phosphate acetyl/butyryltransferase (16.7%)" LVHGGEEFASSVLINQDVINKVIECSDLAPLHNPANLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" LVPLCPFVAGYIQK Bacteria Bacteria 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0016740 (100%) transferase activity (100%) "IPR016181 (33.3%) IPR031165 (33.3%) IPR045057 (33.3%)" "Acyl-CoA N-acyltransferase (33.3%) Yjdj-type Gcn5-related N-acetyltransferase (33.3%) Gcn5-related N-acetyltransferase (33.3%)" VTGTKDGITATQMDIKVDGLSYEILENALAQAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8.3%) IPR003029 (8.3%) IPR004087 (8.3%)" "Exoribonuclease, phosphorolytic domain 1 (8.3%) S1 domain (8.3%) K Homology domain (8.3%)" CYNIETVEDQKVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (48.6%) "GO:0004493 (48.6%) GO:0051213 (1.9%) GO:0016829 (0.9%)" L-methylmalonyl-CoA metabolic process (48.6%) "methylmalonyl-CoA epimerase activity (48.6%) dioxygenase activity (1.9%) lyase activity (0.9%)" "IPR029068 (25.1%) IPR037523 (25.1%) IPR051785 (25.1%)" "Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25.1%) Vicinal oxygen chelate (VOC), core domain (25.1%) Methylmalonyl-CoA/ethylmalonyl-CoA epimerase (25.1%)" YIAAEPASCPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.20 (100%) tryptophan synthase (100%) GO:0005737 (25%) "GO:0004834 (25%) GO:0030170 (25%) GO:0052684 (25%)" cytoplasm (25%) "tryptophan synthase activity (25%) pyridoxal phosphate binding (25%) L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity (25%)" "IPR001926 (20%) IPR006316 (20%) IPR006653 (20%)" "Tryptophan synthase beta chain-like, PALP domain (20%) Tryptophan synthase, beta chain-like (20%) Tryptophan synthase, beta chain, conserved site (20%)" TGVVEQNAPKDYYIVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.5.1.108 (50%) 4.2.1.59 (50%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase (50%) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (50%)" "GO:0006633 (14.3%) GO:0009245 (14.3%)" "GO:0005737 (14.3%) GO:0016020 (14.3%)" "GO:0046872 (14.3%) GO:0103117 (14.3%) GO:0019171 (10.7%)" "fatty acid biosynthetic process (14.3%) lipid A biosynthetic process (14.3%)" "cytoplasm (14.3%) membrane (14.3%)" "metal ion binding (14.3%) UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.3%) (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (10.7%)" "IPR004463 (14.3%) IPR010084 (14.3%) IPR011334 (14.3%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.3%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (14.3%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.3%)" TDKNAEPDPVYIKEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.4%) GO:0009090 (17.4%) GO:0009088 (12.9%)" GO:0005829 (17.4%) "GO:0004072 (17.4%) GO:0005524 (17.4%)" "lysine biosynthetic process via diaminopimelate (17.4%) homoserine biosynthetic process (17.4%) threonine biosynthetic process (12.9%)" cytosol (17.4%) "aspartate kinase activity (17.4%) ATP binding (17.4%)" "IPR001048 (13.2%) IPR001341 (13.2%) IPR005260 (13.2%)" "Aspartate/glutamate/uridylate kinase (13.2%) Aspartate kinase (13.2%) Aspartate kinase, monofunctional class (13.2%)" AAEAAYTGSQEPVEEMRK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "2.6.1.- (92.9%) 2.6.1.1 (7.1%)" "Transaminases (92.9%) aspartate transaminase (7.1%)" GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" TGKYADVNDYVAELAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.2 (100%) glucokinase (100%) "GO:0004340 (80%) GO:0016301 (20%)" "glucokinase activity (80%) kinase activity (20%)" "IPR000600 (33.3%) IPR043129 (33.3%) IPR049874 (33.3%)" "ROK family (33.3%) ATPase, nucleotide binding domain (33.3%) ROK, conserved site (33.3%)" HFTQFDPLYKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) "GO:0005978 (19.3%) GO:0005975 (0.9%)" GO:0005737 (20.2%) "GO:0003844 (20.2%) GO:0043169 (20.2%) GO:0004553 (19.3%)" "glycogen biosynthetic process (19.3%) carbohydrate metabolic process (0.9%)" cytoplasm (20.2%) "1,4-alpha-glucan branching enzyme activity (20.2%) cation binding (20.2%) hydrolase activity, hydrolyzing O-glycosyl compounds (19.3%)" "IPR006048 (12.9%) IPR013780 (12.9%) IPR004193 (12.4%)" "Alpha-amylase/branching enzyme, C-terminal all beta (12.9%) Glycosyl hydrolase, all-beta (12.9%) Glycoside hydrolase, family 13, N-terminal (12.4%)" GRLDGTLSQDGELNPDTVAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.2.7.8 (100%) indolepyruvate ferredoxin oxidoreductase (100%) GO:0044281 (20%) "GO:0030976 (20%) GO:0043805 (20%) GO:0046872 (20%)" small molecule metabolic process (20%) "thiamine pyrophosphate binding (20%) indolepyruvate ferredoxin oxidoreductase activity (20%) metal ion binding (20%)" "IPR002880 (20%) IPR011766 (20%) IPR017721 (20%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20%) Thiamine pyrophosphate enzyme, TPP-binding (20%) Indolepyruvate oxidoreductase subunit IorA (20%)" KIMHSDIQVSAMCVR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000534 (16.8%) IPR005986 (16.8%) IPR012080 (16.8%)" "Semialdehyde dehydrogenase, NAD-binding (16.8%) Aspartate-semialdehyde dehydrogenase, beta-type (16.8%) Aspartate-semialdehyde dehydrogenase (16.8%)" LYFCVDFLHVKPGKGNTIMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043043 (32.2%) "GO:0005829 (30.5%) GO:0005737 (3.4%)" GO:0003746 (33.9%) peptide biosynthetic process (32.2%) "cytosol (30.5%) cytoplasm (3.4%)" translation elongation factor activity (33.9%) "IPR008991 (11.4%) IPR013185 (11.4%) IPR014722 (11.4%)" "Translation protein SH3-like domain superfamily (11.4%) Translation elongation factor, KOW-like (11.4%) Large ribosomal subunit protein uL2, domain 2 (11.4%)" IREYAEQYGCK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006537 (25.8%) GO:0005829 (24.2%) "GO:0004354 (25.8%) GO:0000166 (24.2%)" glutamate biosynthetic process (25.8%) cytosol (24.2%) "glutamate dehydrogenase (NADP+) activity (25.8%) nucleotide binding (24.2%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" ACNVSGAAIHQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0043200 (20.7%) GO:0006355 (5.4%)" GO:0005829 (20.7%) "GO:0043565 (53%) GO:0003700 (0.3%)" "response to amino acid (20.7%) regulation of DNA-templated transcription (5.4%)" cytosol (20.7%) "sequence-specific DNA binding (53%) DNA-binding transcription factor activity (0.3%)" "IPR000485 (15.1%) IPR036388 (15%) IPR036390 (15%)" "AsnC-type HTH domain (15.1%) Winged helix-like DNA-binding domain superfamily (15%) Winged helix DNA-binding domain superfamily (15%)" SILESLSQAATYNDRK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.8%) GO:0044210 (11.8%)" "GO:0005829 (11.8%) GO:0097268 (10.3%)" "GO:0003883 (11.8%) GO:0005524 (11.8%) GO:0042802 (11.8%)" "pyrimidine nucleobase biosynthetic process (11.8%) 'de novo' CTP biosynthetic process (11.8%)" "cytosol (11.8%) cytoophidium (10.3%)" "CTP synthase activity (11.8%) ATP binding (11.8%) identical protein binding (11.8%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" NGPTLFCPPIGHVQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.3.1.21 (86.6%) 2.1.2.- (13.4%)" "phosphoribosylglycinamide formyltransferase 2 (86.6%) Hydroxymethyl-, formyl- and related transferases (13.4%)" "GO:0006189 (15.9%) GO:0006164 (0.4%) GO:0009152 (0.3%)" GO:0005829 (16.7%) "GO:0005524 (16.7%) GO:0000287 (16.2%) GO:0004644 (16.2%)" "'de novo' IMP biosynthetic process (15.9%) purine nucleotide biosynthetic process (0.4%) purine ribonucleotide biosynthetic process (0.3%)" cytosol (16.7%) "ATP binding (16.7%) magnesium ion binding (16.2%) phosphoribosylglycinamide formyltransferase activity (16.2%)" "IPR003135 (12.7%) IPR011761 (12.7%) IPR013815 (12.6%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.7%) ATP-grasp fold (12.7%) ATP-grasp fold, subdomain 1 (12.6%)" LSGITTLEDDATLDKLVAASVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.1.3.7 (100%) 3'(2'),5'-bisphosphate nucleotidase (100%) "GO:0000103 (20%) GO:0050427 (20%)" GO:0005886 (20%) "GO:0000287 (20%) GO:0008441 (20%)" "sulfate assimilation (20%) 3'-phosphoadenosine 5'-phosphosulfate metabolic process (20%)" plasma membrane (20%) "magnesium ion binding (20%) 3'(2'),5'-bisphosphate nucleotidase activity (20%)" "IPR000760 (25%) IPR006240 (25%) IPR020583 (25%)" "Inositol monophosphatase-like (25%) 3'(2'),5'-bisphosphate nucleotidase CysQ (25%) Inositol monophosphatase, metal-binding site (25%)" LDGHIVQGHVDQTAVCAEVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.5.1.9 (100%) riboflavin synthase (100%) GO:0009231 (50%) GO:0004746 (50%) riboflavin biosynthetic process (50%) riboflavin synthase activity (50%) "IPR001783 (25%) IPR017938 (25%) IPR023366 (25%)" "Lumazine-binding protein (25%) Riboflavin synthase-like beta-barrel (25%) ATP synthase subunit alpha, N-terminal domain-like superfamily (25%)" LVLVDSVVKHELASSAYNKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" EFHAPAVVNGNEIIEDFSLEQYVGKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.15 (100%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (100%) "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" LGEHNIDVLEGNEQFINAAKIITHPNFNGNTLDNDIMLIK Sus scrofa Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Laurasiatheria Artiodactyla Suina Suidae Sus Sus scrofa 3.4.21.4 (100%) trypsin (100%) "GO:0006508 (24.2%) GO:0007586 (24.2%)" "GO:0005576 (18.2%) GO:0005615 (6.1%)" "GO:0004252 (24.2%) GO:0046872 (3%)" "proteolysis (24.2%) digestion (24.2%)" "extracellular region (18.2%) extracellular space (6.1%)" "serine-type endopeptidase activity (24.2%) metal ion binding (3%)" "IPR001254 (14.3%) IPR001314 (14.3%) IPR009003 (14.3%)" "Serine proteases, trypsin domain (14.3%) Peptidase S1A, chymotrypsin family (14.3%) Peptidase S1, PA clan (14.3%)" KAIEELNQASYDGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0003723 (100%) RNA binding (100%) "IPR000504 (20%) IPR012677 (20%) IPR035979 (20%)" "RNA recognition motif domain (20%) Nucleotide-binding alpha-beta plait domain superfamily (20%) RNA-binding domain superfamily (20%)" HVTDLGCLEFSGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.1.11 (100%) glycogen(starch) synthase (100%) GO:0009103 (50%) "GO:0016757 (33.3%) GO:0004373 (16.7%)" lipopolysaccharide biosynthetic process (50%) "glycosyltransferase activity (33.3%) alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (16.7%)" "IPR001296 (50%) IPR028098 (50%)" "Glycosyl transferase, family 1 (50%) Glycosyltransferase subfamily 4-like, N-terminal domain (50%)" KQLDALTEFVK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.12 (100%) aspartate--tRNA ligase (100%) "GO:0006422 (19.8%) GO:0006418 (0.2%) GO:0006430 (0.1%)" GO:0005737 (20.1%) "GO:0005524 (20.1%) GO:0004815 (20%) GO:0003676 (19.3%)" "aspartyl-tRNA aminoacylation (19.8%) tRNA aminoacylation for protein translation (0.2%) lysyl-tRNA aminoacylation (0.1%)" cytoplasm (20.1%) "ATP binding (20.1%) aspartate-tRNA ligase activity (20%) nucleic acid binding (19.3%)" "IPR004115 (9.3%) IPR004364 (9.3%) IPR029351 (9.3%)" "GAD-like domain superfamily (9.3%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.3%) GAD domain (9.3%)" KENIAIQEAHR Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" ICIPDRIFSFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.4.1.3 (50%) 1.4.1.4 (50%)" "glutamate dehydrogenase [NAD(P)(+)] (50%) glutamate dehydrogenase (NADP(+)) (50%)" GO:0006537 (25.4%) GO:0005829 (24.9%) "GO:0004354 (25.4%) GO:0000166 (24.3%)" glutamate biosynthetic process (25.4%) cytosol (24.9%) "glutamate dehydrogenase (NADP+) activity (25.4%) nucleotide binding (24.3%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" ITYTEPGVKGDTATNTLKPATVETGAEVR Saprospirales Bacteria Pseudomonadati Bacteroidota Saprospiria Saprospirales GO:0043043 (33.3%) GO:0005829 (33.3%) GO:0003746 (33.3%) peptide biosynthetic process (33.3%) cytosol (33.3%) translation elongation factor activity (33.3%) "IPR001059 (11.1%) IPR008991 (11.1%) IPR011768 (11.1%)" "Translation elongation factor P/YeiP, central (11.1%) Translation protein SH3-like domain superfamily (11.1%) Translation elongation factor P (11.1%)" VTFGGENWDGLVQALEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" IAQNQLDKNLAEVNATSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (25%) GO:0005737 (25%) "GO:0004828 (25%) GO:0005524 (25%)" seryl-tRNA aminoacylation (25%) cytoplasm (25%) "serine-tRNA ligase activity (25%) ATP binding (25%)" "IPR002314 (12.5%) IPR002317 (12.5%) IPR006195 (12.5%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (12.5%) Serine-tRNA ligase, type1 (12.5%) Aminoacyl-tRNA synthetase, class II (12.5%)" SMEVIADALSGFNHSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" MYTRHEMLDVVK Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.3.5.1 (96%) 1.3.5.4 (4%)" "succinate dehydrogenase (96%) Transferred entry: 1.3.5.1 (4%)" GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (13%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (13%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" GFSSGSAVVSGGSR Mammalia Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia "GO:0031424 (11.3%) GO:0045109 (11.3%) GO:0032980 (4.3%)" "GO:0045095 (13.3%) GO:0005615 (10.3%) GO:0005829 (5.9%)" "GO:0030280 (11.3%) GO:0008092 (4.2%) GO:0005200 (0.1%)" "keratinization (11.3%) intermediate filament organization (11.3%) keratinocyte activation (4.3%)" "keratin filament (13.3%) extracellular space (10.3%) cytosol (5.9%)" "structural constituent of skin epidermis (11.3%) cytoskeletal protein binding (4.2%) structural constituent of cytoskeleton (0.1%)" "IPR032444 (25.1%) IPR039008 (25.1%) IPR003054 (24.9%)" "Keratin type II head (25.1%) Intermediate filament, rod domain (25.1%) Keratin, type II (24.9%)" LEGLKENVICGHLIPAGTGQR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.6%) GO:0000428 (17.5%) "GO:0003899 (17.5%) GO:0003677 (16.6%) GO:0000287 (15.6%)" DNA-templated transcription (16.6%) DNA-directed RNA polymerase complex (17.5%) "DNA-directed RNA polymerase activity (17.5%) DNA binding (16.6%) magnesium ion binding (15.6%)" "IPR007081 (9.2%) IPR045867 (9.2%) IPR000722 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.2%) DNA-directed RNA polymerase, subunit beta-prime (9.2%) RNA polymerase, alpha subunit (9.1%)" AALEPIEAEMTSLNK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0005524 (24.4%) GO:0016887 (24.4%) GO:0051082 (24.4%)" "ATP binding (24.4%) ATP hydrolysis activity (24.4%) unfolded protein binding (24.4%)" "IPR001404 (20%) IPR019805 (20%) IPR020568 (20%)" "Heat shock protein Hsp90 family (20%) Heat shock protein Hsp90, conserved site (20%) Ribosomal protein uS5 domain 2-type superfamily (20%)" AKVPLAEMFGYVTALR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0032790 (20.2%) GO:0005737 (19.7%) "GO:0003746 (20.2%) GO:0005525 (20.2%) GO:0003924 (19.7%)" ribosome disassembly (20.2%) cytoplasm (19.7%) "translation elongation factor activity (20.2%) GTP binding (20.2%) GTPase activity (19.7%)" "IPR000640 (6.3%) IPR005517 (6.3%) IPR014721 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translation elongation factor EFG/EF2, domain IV (6.3%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.3%)" LGEDCYGHETFALNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis TKPSDLGRPGHINPLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.5.4.25 (50.9%) 4.1.99.12 (49.1%)" "GTP cyclohydrolase II (50.9%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (49.1%)" GO:0009231 (12.9%) GO:0005829 (12.9%) "GO:0003935 (12.9%) GO:0008686 (12.9%) GO:0005525 (12.4%)" riboflavin biosynthetic process (12.9%) cytosol (12.9%) "GTP cyclohydrolase II activity (12.9%) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (12.9%) GTP binding (12.4%)" "IPR000422 (16.9%) IPR017945 (16.9%) IPR032677 (16.9%)" "3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB (16.9%) DHBP synthase RibB-like alpha/beta domain superfamily (16.9%) GTP cyclohydrolase II (16.9%)" KVQDYLAQTGDNADYNQAYTWLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (44%) IPR019734 (44%) IPR013105 (12%)" "Tetratricopeptide-like helical domain superfamily (44%) Tetratricopeptide repeat (44%) Tetratricopeptide repeat 2 (12%)" RFLILSDEADDFKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR012912 (50%) IPR024047 (50%)" "Plasmid pRiA4b, Orf3-like domain (50%) MM3350-like superfamily (50%)" NKNPLIILESCDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0002181 (25%) "GO:0022625 (25%) GO:0005840 (0.2%)" "GO:0003735 (25%) GO:0019843 (25%)" cytoplasmic translation (25%) "cytosolic large ribosomal subunit (25%) ribosome (0.2%)" "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000702 (20%) IPR019906 (20%) IPR020040 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, bacteria (20%) Large ribosomal subunit protein uL6, alpha-beta domain (20%)" VAAALGATLLLEHCKPDVIINTGSAGGLAPTLK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "3.2.2.9 (98.2%) 3.2.2.16 (1.8%)" "adenosylhomocysteine nucleosidase (98.2%) methylthioadenosine nucleosidase (1.8%)" "GO:0019284 (16.5%) GO:0019509 (16.5%) GO:0046124 (15.9%)" GO:0005829 (16.5%) "GO:0008782 (16.5%) GO:0008930 (16.5%) GO:0016798 (0.3%)" "L-methionine salvage from S-adenosylmethionine (16.5%) L-methionine salvage from methylthioadenosine (16.5%) purine deoxyribonucleoside catabolic process (15.9%)" cytosol (16.5%) "adenosylhomocysteine nucleosidase activity (16.5%) methylthioadenosine nucleosidase activity (16.5%) hydrolase activity, acting on glycosyl bonds (0.3%)" "IPR000845 (33.3%) IPR010049 (33.3%) IPR035994 (33.3%)" "Nucleoside phosphorylase domain (33.3%) MTA/SAH nucleosidase (33.3%) Nucleoside phosphorylase superfamily (33.3%)" FICGTQDIHKQLEAAISDYFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (14.3%) GO:0030148 (14.3%)" "GO:0005829 (14.3%) GO:0016020 (14.3%)" "GO:0008890 (14.3%) GO:0030170 (14.3%) GO:0004758 (7.8%)" "L-threonine catabolic process to glycine (14.3%) sphingolipid biosynthetic process (14.3%)" "cytosol (14.3%) membrane (14.3%)" "glycine C-acetyltransferase activity (14.3%) pyridoxal phosphate binding (14.3%) serine C-palmitoyltransferase activity (7.8%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" AVATREEAVAAK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR020069 (14.5%) IPR036791 (14.5%) IPR000244 (14.2%)" "Large ribosomal subunit protein bL9, C-terminal (14.5%) Large ribosomal subunit protein bL9, C-terminal domain superfamily (14.5%) Large ribosomal subunit protein bL9 (14.2%)" FIWTHDAFR Pseudomonadati Bacteria Pseudomonadati "2.2.1.1 (96%) 2.2.1.- (4%)" "transketolase (96%) Transketolases and transaldolases (4%)" GO:0006098 (24.9%) "GO:0005829 (24.9%) GO:0016020 (0.3%)" "GO:0004802 (24.9%) GO:0046872 (24.7%) GO:0047896 (0.2%)" pentose-phosphate shunt (24.9%) "cytosol (24.9%) membrane (0.3%)" "transketolase activity (24.9%) metal ion binding (24.7%) formaldehyde transketolase activity (0.2%)" "IPR005475 (12.8%) IPR029061 (12.8%) IPR033247 (12.8%)" "Transketolase-like, pyrimidine-binding domain (12.8%) Thiamin diphosphate-binding fold (12.8%) Transketolase family (12.8%)" AHQEHIDPICGMVVDPK Bifidobacterium animalis Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium animalis 3.6.3.4 (100%) Transferred entry: 7.2.2.9 (100%) GO:0055070 (14.3%) GO:0005886 (14.3%) "GO:0005507 (14.3%) GO:0005524 (14.3%) GO:0016491 (14.3%)" copper ion homeostasis (14.3%) plasma membrane (14.3%) "copper ion binding (14.3%) ATP binding (14.3%) oxidoreductase activity (14.3%)" "IPR001757 (6.7%) IPR007029 (6.7%) IPR008250 (6.7%)" "P-type ATPase (6.7%) YHS domain (6.7%) P-type ATPase, A domain superfamily (6.7%)" EAPAGDIMDHIAAFFDAR root 2.5.1.15 (100%) dihydropteroate synthase (100%) "GO:0046654 (20.2%) GO:0046656 (18.4%) GO:0042558 (1.1%)" "GO:0005829 (20.2%) GO:0016020 (0.1%)" "GO:0004156 (20.2%) GO:0046872 (18.4%) GO:0016740 (1.1%)" "tetrahydrofolate biosynthetic process (20.2%) folic acid biosynthetic process (18.4%) pteridine-containing compound metabolic process (1.1%)" "cytosol (20.2%) membrane (0.1%)" "dihydropteroate synthase activity (20.2%) metal ion binding (18.4%) transferase activity (1.1%)" "IPR011005 (26.1%) IPR000489 (26.1%) IPR045031 (24.7%)" "Dihydropteroate synthase-like superfamily (26.1%) Pterin-binding domain (26.1%) Dihydropteroate synthase-like (24.7%)" GLIYDRPNHDNFNVHGYEEEGSTTTPYDMVR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium "4.1.2.- (56.7%) 4.1.2.22 (33.3%) 4.1.2.9 (10%)" "Aldehyde-lyases (56.7%) fructose-6-phosphate phosphoketolase (33.3%) phosphoketolase (10%)" GO:0005975 (32.7%) "GO:0000287 (32.1%) GO:0016832 (26.8%) GO:0047905 (6%)" carbohydrate metabolic process (32.7%) "magnesium ion binding (32.1%) aldehyde-lyase activity (26.8%) fructose-6-phosphate phosphoketolase activity (6%)" "IPR005593 (13.8%) IPR018969 (13.8%) IPR018970 (13.8%)" "Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase (13.8%) Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal (13.8%) Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal (13.8%)" KVALAHFQYINPLPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.7.3 (50%) 1.2.-.- (25%) 1.2.7.11 (25%)" "2-oxoglutarate synthase (50%) Acting on the aldehyde or oxo group of donors (25%) 2-oxoacid oxidoreductase (ferredoxin) (25%)" GO:0006979 (50%) "GO:0016903 (46.3%) GO:0016491 (1.9%) GO:0047553 (1.9%)" response to oxidative stress (50%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors (46.3%) oxidoreductase activity (1.9%) 2-oxoglutarate synthase activity (1.9%)" "IPR009014 (12.9%) IPR029061 (12.9%) IPR033412 (12.9%)" "Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.9%) Thiamin diphosphate-binding fold (12.9%) Pyruvate:ferredoxin oxidoreductase, core domain II (12.9%)" GIEKGCANSILIK Pseudomonadati Bacteria Pseudomonadati 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.6%) GO:0005576 (16.6%) GO:0009986 (16.3%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.3%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.6%) extracellular region (16.6%) cell surface (16.3%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.3%)" "IPR000941 (16.8%) IPR020810 (16.8%) IPR036849 (16.8%)" "Enolase (16.8%) Enolase, C-terminal TIM barrel domain (16.8%) Enolase-like, C-terminal domain superfamily (16.8%)" VANLPFVGSDVLASAACMDKDVTKR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 6.3.2.4 (100%) D-alanine--D-alanine ligase (100%) "GO:0009252 (14.4%) GO:0008360 (14.1%) GO:0071555 (14.1%)" GO:0005829 (14.4%) "GO:0008716 (14.4%) GO:0005524 (14.3%) GO:0046872 (14.1%)" "peptidoglycan biosynthetic process (14.4%) regulation of cell shape (14.1%) cell wall organization (14.1%)" cytosol (14.4%) "D-alanine-D-alanine ligase activity (14.4%) ATP binding (14.3%) metal ion binding (14.1%)" "IPR000291 (14.5%) IPR011127 (14.5%) IPR016185 (14.5%)" "D-alanine--D-alanine ligase/VANA/B/C, conserved site (14.5%) D-alanine--D-alanine ligase, N-terminal domain (14.5%) Pre-ATP-grasp domain superfamily (14.5%)" DDAAPAAGSTLDK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006865 (32.2%) GO:0015813 (0.4%) GO:0070778 (0.4%)" "GO:0005576 (32.2%) GO:0030288 (32.2%) GO:0016020 (0.4%)" "GO:0016595 (0.4%) GO:0070335 (0.4%)" "amino acid transport (32.2%) L-glutamate transmembrane transport (0.4%) L-aspartate transmembrane transport (0.4%)" "extracellular region (32.2%) outer membrane-bounded periplasmic space (32.2%) membrane (0.4%)" "glutamate binding (0.4%) aspartate binding (0.4%)" "IPR051455 (50.3%) IPR001638 (49.7%)" "Bacterial solute-binding protein 3 (50.3%) Solute-binding protein family 3/N-terminal domain of MltF (49.7%)" NASSFVDLYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.3%) IPR011013 (7.3%) IPR014718 (7.3%)" "Beta galactosidase small chain/ domain 5 (7.3%) Galactose mutarotase-like domain superfamily (7.3%) Glycoside hydrolase-type carbohydrate-binding (7.3%)" VSEGINDYLER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.3.-.- (90.9%) 1.3.1.14 (9.1%)" "Acting on the CH-CH group of donors (90.9%) dihydroorotate dehydrogenase (NAD(+)) (9.1%)" "GO:0006207 (25%) GO:0044205 (25%)" GO:0005737 (25%) "GO:0004589 (16.7%) GO:0004152 (8.3%)" "'de novo' pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" cytoplasm (25%) "dihydroorotate dehydrogenase (NAD+) activity (16.7%) dihydroorotate dehydrogenase activity (8.3%)" "IPR001295 (12.5%) IPR005720 (12.5%) IPR012135 (12.5%)" "Dihydroorotate dehydrogenase, conserved site (12.5%) Dihydroorotate dehydrogenase, catalytic (12.5%) Dihydroorotate dehydrogenase, class 1/ 2 (12.5%)" AIKPVNEADAEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.3%) "GO:0003746 (25.3%) GO:0005525 (25.3%) GO:0003924 (24.2%)" ribosome disassembly (25.3%) "translation elongation factor activity (25.3%) GTP binding (25.3%) GTPase activity (24.2%)" "IPR000640 (7.6%) IPR005517 (7.6%) IPR009000 (7.6%)" "Elongation factor EFG, domain V-like (7.6%) Translation elongation factor EFG/EF2, domain IV (7.6%) Translation protein, beta-barrel domain superfamily (7.6%)" NYDGLQNDLDKMDGVFLK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (22.8%) GO:0046034 (2.1%) GO:1902600 (0.2%)" "GO:0046961 (24.8%) GO:0005524 (24.3%) GO:0046933 (22.8%)" "proton motive force-driven plasma membrane ATP synthesis (22.8%) ATP metabolic process (2.1%) proton transmembrane transport (0.2%)" "proton-transporting ATPase activity, rotational mechanism (24.8%) ATP binding (24.3%) proton-transporting ATP synthase activity, rotational mechanism (22.8%)" "IPR022878 (13.1%) IPR027417 (13.1%) IPR004100 (12.9%)" "V-type ATP synthase catalytic alpha chain (13.1%) P-loop containing nucleoside triphosphate hydrolase (13.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (12.9%)" YKVPGFESLSLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0016787 (50%) GO:0046872 (50%)" "hydrolase activity (50%) metal ion binding (50%)" IPR039461 (100%) Peptidase family M49 (100%) SIGQFNLTGIAPAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005524 (33.6%) GO:0140662 (33.6%) GO:0051082 (32.7%)" "ATP binding (33.6%) ATP-dependent protein folding chaperone (33.6%) unfolded protein binding (32.7%)" "IPR013126 (16.8%) IPR029047 (16.8%) IPR029048 (16.8%)" "Heat shock protein 70 family (16.8%) Heat shock protein 70kD, peptide-binding domain superfamily (16.8%) Heat shock protein 70kD, C-terminal domain superfamily (16.8%)" IEASSGLSDDEVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005737 (23.4%) GO:0070013 (3.6%)" "GO:0005524 (24.3%) GO:0051082 (24.3%) GO:0140662 (24.3%)" "cytoplasm (23.4%) intracellular organelle lumen (3.6%)" "ATP binding (24.3%) unfolded protein binding (24.3%) ATP-dependent protein folding chaperone (24.3%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" LSPEMVSASTLAGDPITAR root "5.4.2.2 (99.9%) 5.4.2.- (0.1%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (99.9%) Phosphotransferases (phosphomutases) (0.1%)" "GO:0005975 (24.4%) GO:0006166 (1.3%) GO:0006006 (0%)" GO:0005829 (23.1%) "GO:0004614 (24.8%) GO:0000287 (23.9%) GO:0008973 (1.3%)" "carbohydrate metabolic process (24.4%) purine ribonucleoside salvage (1.3%) glucose metabolic process (0%)" cytosol (23.1%) "phosphoglucomutase activity (24.8%) magnesium ion binding (23.9%) phosphopentomutase activity (1.3%)" "IPR005843 (11.4%) IPR036900 (11.4%) IPR005846 (11.2%)" "Alpha-D-phosphohexomutase, C-terminal (11.4%) Alpha-D-phosphohexomutase, C-terminal domain superfamily (11.4%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (11.2%)" ELINPQSIVVVGGSNNVHKPGGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (45.9%) GO:0043758 (21.6%) GO:0003824 (13.5%)" "ATP binding (45.9%) acetate-CoA ligase (ADP-forming) activity (21.6%) catalytic activity (13.5%)" "IPR003781 (18.2%) IPR016102 (18.2%) IPR032875 (18.2%)" "CoA-binding (18.2%) Succinyl-CoA synthetase-like (18.2%) Succinyl-CoA synthetase-like, flavodoxin domain (18.2%)" NAAGAASSTVSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.24.- (85.7%) 3.4.-.- (14.3%)" "Metalloendopeptidases (85.7%) Acting on peptide bonds (peptidases) (14.3%)" GO:0051603 (25%) GO:0016020 (25%) "GO:0004222 (25%) GO:0046872 (24.2%) GO:0016787 (0.8%)" proteolysis involved in protein catabolic process (25%) membrane (25%) "metalloendopeptidase activity (25%) metal ion binding (24.2%) hydrolase activity (0.8%)" "IPR001915 (50%) IPR051156 (50%)" "Peptidase M48 (50%) Mitochondrial and Outer Membrane Metalloprotease (50%)" SIEQTNLAAKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR007139 (100%) Protein of unknown function DUF349 (100%) APPFTTSTLQQEAAR Bacteria Bacteria 5.6.2.1 (100%) DNA topoisomerase (100%) "GO:0006265 (23.5%) GO:0007059 (0.1%)" GO:0005694 (6.2%) "GO:0003677 (23.5%) GO:0003917 (23.5%) GO:0046872 (16.9%)" "DNA topological change (23.5%) chromosome segregation (0.1%)" chromosome (6.2%) "DNA binding (23.5%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (23.5%) metal ion binding (16.9%)" "IPR000380 (7.1%) IPR013497 (7.1%) IPR003601 (7.1%)" "DNA topoisomerase, type IA (7.1%) DNA topoisomerase, type IA, central (7.1%) DNA topoisomerase, type IA, domain 2 (7.1%)" ADNGWLQLNTAK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.5.2.17 (100%) hydroxyisourate hydrolase (100%) "GO:0006144 (32.9%) GO:0051289 (0.4%)" "GO:0042597 (32.2%) GO:0032991 (0.4%)" "GO:0033971 (32.2%) GO:0016787 (1.8%) GO:0042802 (0.4%)" "purine nucleobase metabolic process (32.9%) protein homotetramerization (0.4%)" "periplasmic space (32.2%) protein-containing complex (0.4%)" "hydroxyisourate hydrolase activity (32.2%) hydrolase activity (1.8%) identical protein binding (0.4%)" "IPR023416 (17.1%) IPR036817 (17.1%) IPR000895 (16.9%)" "Transthyretin/hydroxyisourate hydrolase domain (17.1%) Transthyretin/hydroxyisourate hydrolase domain superfamily (17.1%) Transthyretin/hydroxyisourate hydrolase (16.9%)" YSAFGRFPGGFTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8.1%) IPR012162 (8.1%) IPR015847 (8.1%)" "Exoribonuclease, phosphorolytic domain 1 (8.1%) Polyribonucleotide nucleotidyltransferase (8.1%) Exoribonuclease, phosphorolytic domain 2 (8.1%)" HQSQAESAPYLGDDER Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.7%) GO:0006044 (32.7%)" "GO:0004342 (32.7%) GO:0016853 (2%)" "carbohydrate metabolic process (32.7%) N-acetylglucosamine metabolic process (32.7%)" "glucosamine-6-phosphate deaminase activity (32.7%) isomerase activity (2%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" AVGESVEKPLLYYR root 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) "GO:0006012 (31%) GO:0033499 (2%) GO:0005996 (0.3%)" GO:0005829 (33%) "GO:0003978 (33%) GO:0003974 (0.7%)" "galactose metabolic process (31%) galactose catabolic process via UDP-galactose, Leloir pathway (2%) monosaccharide metabolic process (0.3%)" cytosol (33%) "UDP-glucose 4-epimerase activity (33%) UDP-N-acetylglucosamine 4-epimerase activity (0.7%)" "IPR005886 (33%) IPR036291 (33%) IPR016040 (17.7%)" "UDP-glucose 4-epimerase (33%) NAD(P)-binding domain superfamily (33%) NAD(P)-binding domain (17.7%)" VVAGVGVPQLSAVYDVAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20.2%) GO:0006183 (20.2%)" "GO:0003938 (20.2%) GO:0046872 (20.2%) GO:0000166 (19.1%)" "GMP biosynthetic process (20.2%) GTP biosynthetic process (20.2%)" "IMP dehydrogenase activity (20.2%) metal ion binding (20.2%) nucleotide binding (19.1%)" "IPR001093 (16.8%) IPR005990 (16.8%) IPR013785 (16.8%)" "IMP dehydrogenase/GMP reductase (16.8%) Inosine-5'-monophosphate dehydrogenase (16.8%) Aldolase-type TIM barrel (16.8%)" RVPTSDVSVVDLTVVLEK root "1.2.1.- (94.9%) 1.2.1.12 (5.1%)" "With NAD(+) or NADP(+) as acceptor (94.9%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (5.1%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" "GO:0005737 (16.2%) GO:0005829 (0.5%)" "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (10.8%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" "cytoplasm (16.2%) cytosol (0.5%)" "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (10.8%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" KSGGFTCSHLR Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.2.7.1 (75.5%) 1.2.7.- (19.8%) 1.2.1.51 (4.7%)" "pyruvate synthase (75.5%) With an iron-sulfur protein as acceptor (19.8%) pyruvate dehydrogenase (NADP(+)) (4.7%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (11.9%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.4%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (11.9%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.4%)" "IPR019752 (7.8%) IPR050722 (7.8%) IPR011895 (7.8%)" "Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%) Pyruvate-flavodoxin oxidoreductase (7.8%)" VYSEAATMEAADEIGQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.10 (78.6%) 5.4.2.2 (14.3%) 5.4.2.8 (7.1%)" "phosphoglucosamine mutase (78.6%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (14.3%) phosphomannomutase (7.1%)" "GO:0005975 (14%) GO:0006048 (14%) GO:0009252 (14%)" GO:0005829 (14%) "GO:0000287 (14%) GO:0004615 (14%) GO:0008966 (14%)" "carbohydrate metabolic process (14%) UDP-N-acetylglucosamine biosynthetic process (14%) peptidoglycan biosynthetic process (14%)" cytosol (14%) "magnesium ion binding (14%) phosphomannomutase activity (14%) phosphoglucosamine mutase activity (14%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" AAIEEGIVPGGGVAYIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (18.6%) GO:0005737 (14.6%) "GO:0005524 (18.6%) GO:0140662 (18.6%) GO:0016853 (15.1%)" protein refolding (18.6%) cytoplasm (14.6%) "ATP binding (18.6%) ATP-dependent protein folding chaperone (18.6%) isomerase activity (15.1%)" "IPR001844 (16.9%) IPR002423 (16.9%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%) Chaperonin Cpn60, conserved site (16.7%)" QGGIVAAICAAPMVLGGLGLLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (100%) cytoplasm (100%) "IPR002818 (25%) IPR006287 (25%) IPR029062 (25%)" "DJ-1/PfpI (25%) Protein/nucleic acid deglycase DJ-1 (25%) Class I glutamine amidotransferase-like (25%)" FLDFDSDAPNAAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.9%) GO:0005829 (16.9%) "GO:0003723 (16.9%) GO:0004831 (16.9%) GO:0005524 (16.9%)" tyrosyl-tRNA aminoacylation (16.9%) cytosol (16.9%) "RNA binding (16.9%) tyrosine-tRNA ligase activity (16.9%) ATP binding (16.9%)" "IPR001412 (12.6%) IPR002305 (12.6%) IPR002307 (12.6%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.6%) Aminoacyl-tRNA synthetase, class Ic (12.6%) Tyrosine-tRNA ligase (12.6%)" YAYDKVIMLAGGVGFANMR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" ALTGIEEVKKDFWTNVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (12.3%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (12.3%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" GIYPAVDPLSSTSR root "7.1.2.2 (99.1%) 3.6.3.15 (0.9%)" "H(+)-transporting two-sector ATPase (99.1%) Transferred entry: 7.2.2.1 (0.9%)" "GO:0045259 (23.8%) GO:0005886 (21.8%)" "GO:0005524 (23.8%) GO:0046933 (23.8%) GO:0016787 (6.2%)" "proton-transporting ATP synthase complex (23.8%) plasma membrane (21.8%)" "ATP binding (23.8%) proton-transporting ATP synthase activity, rotational mechanism (23.8%) hydrolase activity (6.2%)" "IPR000194 (11.4%) IPR050053 (11.4%) IPR027417 (11.4%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (11.4%) ATPase alpha/beta chains (11.4%) P-loop containing nucleoside triphosphate hydrolase (11.4%)" VNEHYHVPLLLSQYGYSTYR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.5.2.17 (100%) hydroxyisourate hydrolase (100%) "GO:0006144 (32.9%) GO:0051289 (0.3%)" "GO:0042597 (32.6%) GO:0032991 (0.3%)" "GO:0033971 (32.9%) GO:0016787 (0.7%) GO:0042802 (0.3%)" "purine nucleobase metabolic process (32.9%) protein homotetramerization (0.3%)" "periplasmic space (32.6%) protein-containing complex (0.3%)" "hydroxyisourate hydrolase activity (32.9%) hydrolase activity (0.7%) identical protein binding (0.3%)" "IPR023416 (16.9%) IPR023419 (16.9%) IPR036817 (16.9%)" "Transthyretin/hydroxyisourate hydrolase domain (16.9%) Transthyretin, conserved site (16.9%) Transthyretin/hydroxyisourate hydrolase domain superfamily (16.9%)" RLASYADCYVNDAFGTAHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" LSTLYQLQTMMTEIDKIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" KYTAECIINFQEKDLESSFELENEDKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" AGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVK root 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (25%) GO:0006166 (0.1%) GO:0006006 (0%)" GO:0005829 (24.5%) "GO:0004614 (24.9%) GO:0000287 (24.5%) GO:0016853 (0.3%)" "carbohydrate metabolic process (25%) purine ribonucleoside salvage (0.1%) glucose metabolic process (0%)" cytosol (24.5%) "phosphoglucomutase activity (24.9%) magnesium ion binding (24.5%) isomerase activity (0.3%)" "IPR016055 (11.5%) IPR005844 (11.4%) IPR016066 (11.3%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (11.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (11.4%) Alpha-D-phosphohexomutase, conserved site (11.3%)" NEGAVTAPTASLHFSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.4.99.17 (98.8%) 5.-.-.- (1.2%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase (98.8%) Isomerases (1.2%)" "GO:0002099 (32.5%) GO:0008616 (1.3%)" GO:0005737 (32.5%) "GO:0051075 (32.5%) GO:0016757 (0.9%) GO:0016853 (0.4%)" "tRNA wobble guanine modification (32.5%) tRNA queuosine(34) biosynthetic process (1.3%)" cytoplasm (32.5%) "S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity (32.5%) glycosyltransferase activity (0.9%) isomerase activity (0.4%)" "IPR003699 (25%) IPR036100 (25%) IPR042118 (25%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA (25%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily (25%) QueA, domain 1 (25%)" AHWDIGTGLGILDFETAGK Bacillota Bacteria Bacillati Bacillota 6.1.1.11 (100%) serine--tRNA ligase (100%) "GO:0006434 (14.9%) GO:0016260 (13.4%)" GO:0005737 (14.9%) "GO:0004828 (14.9%) GO:0005524 (14.9%) GO:0016740 (13.4%)" "seryl-tRNA aminoacylation (14.9%) selenocysteine biosynthetic process (13.4%)" cytoplasm (14.9%) "serine-tRNA ligase activity (14.9%) ATP binding (14.9%) transferase activity (13.4%)" "IPR002314 (12.5%) IPR002317 (12.5%) IPR006195 (12.5%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (12.5%) Serine-tRNA ligase, type1 (12.5%) Aminoacyl-tRNA synthetase, class II (12.5%)" TEGNYVVVNYSAEPATSDELDRLLNLNESVIR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" RLVLSPSNPYFFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005975 (66.7%) GO:0016787 (33.3%) carbohydrate metabolic process (66.7%) hydrolase activity (33.3%) "IPR008313 (33.3%) IPR008928 (33.3%) IPR012341 (33.3%)" "Metal-independent alpha-mannosidase (33.3%) Six-hairpin glycosidase superfamily (33.3%) Six-hairpin glycosidase-like superfamily (33.3%)" ENGHTPSEAFNETVEELTQSLMPLFAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.86 (93.9%) 1.1.1.- (6.1%)" "ketol-acid reductoisomerase (NADP(+)) (93.9%) With NAD(+) or NADP(+) as acceptor (6.1%)" "GO:0009097 (20.7%) GO:0009099 (20.7%)" GO:0070013 (0.4%) "GO:0004455 (20.7%) GO:0046872 (20.7%) GO:0016853 (16.6%)" "isoleucine biosynthetic process (20.7%) L-valine biosynthetic process (20.7%)" intracellular organelle lumen (0.4%) "ketol-acid reductoisomerase activity (20.7%) metal ion binding (20.7%) isomerase activity (16.6%)" "IPR000506 (16.7%) IPR008927 (16.7%) IPR013023 (16.7%)" "Ketol-acid reductoisomerase, C-terminal (16.7%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.7%) Ketol-acid reductoisomerase (16.7%)" VVDGSLGGNFLHFIADYLENWKE Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0005737 (33.3%) "GO:0016407 (33.3%) GO:0031405 (33.3%)" cytoplasm (33.3%) "acetyltransferase activity (33.3%) lipoic acid binding (33.3%)" "IPR000089 (12.5%) IPR001078 (12.5%) IPR003016 (12.5%)" "Biotin/lipoyl attachment (12.5%) 2-oxoacid dehydrogenase acyltransferase, catalytic domain (12.5%) 2-oxo acid dehydrogenase, lipoyl-binding site (12.5%)" EKVDMEAAGENAPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (32.9%) "GO:0022627 (32.9%) GO:0005840 (1.2%)" GO:0003735 (32.9%) translation (32.9%) "cytosolic small ribosomal subunit (32.9%) ribosome (1.2%)" structural constituent of ribosome (32.9%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" LQQVGDKPRPK root "GO:0031564 (20%) GO:0006353 (19.9%) GO:0032784 (19.9%)" "GO:0005829 (20%) GO:0005840 (0%) GO:0005886 (0%)" "GO:0003735 (0%) GO:0008320 (0%) GO:0016491 (0%)" "transcription antitermination (20%) DNA-templated transcription termination (19.9%) regulation of DNA-templated transcription elongation (19.9%)" "cytosol (20%) ribosome (0%) plasma membrane (0%)" "structural constituent of ribosome (0%) protein transmembrane transporter activity (0%) oxidoreductase activity (0%)" "IPR043425 (11.2%) IPR001062 (11.1%) IPR014722 (11.1%)" "NusG-like (11.2%) Transcription antitermination protein, NusG (11.1%) Large ribosomal subunit protein uL2, domain 2 (11.1%)" SQEVIDTINSNFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.2.2 (50%) 1.2.5.1 (50%)" "Deleted entry (50%) pyruvate dehydrogenase (quinone) (50%)" GO:0019752 (25%) "GO:0000287 (25%) GO:0030976 (25%) GO:0003824 (22.1%)" carboxylic acid metabolic process (25%) "magnesium ion binding (25%) thiamine pyrophosphate binding (25%) catalytic activity (22.1%)" "IPR000399 (11.2%) IPR011766 (11.2%) IPR012000 (11.2%)" "TPP-binding enzyme, conserved site (11.2%) Thiamine pyrophosphate enzyme, TPP-binding (11.2%) Thiamine pyrophosphate enzyme, central domain (11.2%)" AFRDVELEKEVLAEAQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" HKVIGAFDKITASTPEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0002181 (20%) GO:0015934 (20%) "GO:0003735 (20%) GO:0016740 (20%) GO:0019843 (19.3%)" cytoplasmic translation (20%) large ribosomal subunit (20%) "structural constituent of ribosome (20%) transferase activity (20%) rRNA binding (19.3%)" "IPR002171 (11.1%) IPR005880 (11.1%) IPR008991 (11.1%)" "Large ribosomal subunit protein uL2 (11.1%) Large ribosomal subunit protein uL2, bacteria/organella (11.1%) Translation protein SH3-like domain superfamily (11.1%)" NAIPSGIPDESVPLYLQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae SGFSEQITPK root 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (32.5%) "GO:0004476 (33.8%) GO:0008270 (33.3%) GO:0046872 (0.4%)" carbohydrate metabolic process (32.5%) "mannose-6-phosphate isomerase activity (33.8%) zinc ion binding (33.3%) metal ion binding (0.4%)" "IPR011051 (16.9%) IPR014710 (16.9%) IPR051804 (16.9%)" "RmlC-like cupin domain superfamily (16.9%) RmlC-like jelly roll fold (16.9%) Carbohydrate Metabolism Regulated Kinase/Isomerase (16.9%)" ENAAIVITHYQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003439 (25%) IPR003593 (25%) IPR010230 (25%)" "ABC transporter-like, ATP-binding domain (25%) AAA+ ATPase domain (25%) FeS cluster assembly SUF system, ATPase SufC (25%)" NGSFLLNTIWEGEELAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (73.5%) 1.2.7.- (23.5%) 1.2.1.51 (2.9%)" "pyruvate synthase (73.5%) With an iron-sulfur protein as acceptor (23.5%) pyruvate dehydrogenase (NADP(+)) (2.9%)" "GO:0006979 (14.8%) GO:0022900 (14.7%) GO:0044281 (11.3%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.4%)" "response to oxidative stress (14.8%) electron transport chain (14.7%) small molecule metabolic process (11.3%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.4%)" "IPR002869 (7.8%) IPR019752 (7.8%) IPR050722 (7.8%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (7.8%) Pyruvate:ferredoxin/flavodoxin oxidoreductase (7.8%)" MTDFGLPLPHMGWNR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "4.3.2.10 (50.1%) 3.5.1.2 (49.5%) 2.4.2.- (0.3%)" "imidazole glycerol-phosphate synthase (50.1%) glutaminase (49.5%) Pentosyltransferases (0.3%)" GO:0000105 (20.1%) "GO:0005737 (19.5%) GO:0009382 (0%)" "GO:0000107 (20.1%) GO:0016829 (20.1%) GO:0004359 (16.5%)" L-histidine biosynthetic process (20.1%) "cytoplasm (19.5%) imidazoleglycerol-phosphate synthase complex (0%)" "imidazoleglycerol-phosphate synthase activity (20.1%) lyase activity (20.1%) glutaminase activity (16.5%)" "IPR010139 (33.1%) IPR029062 (33%) IPR017926 (33%)" "Imidazole glycerol phosphate synthase, subunit H (33.1%) Class I glutamine amidotransferase-like (33%) Glutamine amidotransferase (33%)" YSKEHEWLRK root 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) "GO:0019464 (25.4%) GO:0009249 (23.5%) GO:0006730 (0%)" "GO:0005829 (25.4%) GO:0005960 (25.4%) GO:0005739 (0.1%)" "GO:0004375 (0%) GO:0008168 (0%) GO:0008483 (0%)" "glycine decarboxylation via glycine cleavage system (25.4%) protein lipoylation (23.5%) one-carbon metabolic process (0%)" "cytosol (25.4%) glycine cleavage complex (25.4%) mitochondrion (0.1%)" "glycine dehydrogenase (decarboxylating) activity (0%) methyltransferase activity (0%) transaminase activity (0%)" "IPR011053 (16.8%) IPR033753 (16.8%) IPR002930 (16.7%)" "Single hybrid motif (16.8%) Glycine cleavage system H-protein/Simiate (16.8%) Glycine cleavage system H-protein (16.7%)" LTDANVEEQIKDMDGIIICPGFGQR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.5%) GO:0044210 (11.5%)" "GO:0005829 (11.5%) GO:0097268 (11.5%)" "GO:0003883 (11.5%) GO:0005524 (11.5%) GO:0042802 (11.5%)" "pyrimidine nucleobase biosynthetic process (11.5%) 'de novo' CTP biosynthetic process (11.5%)" "cytosol (11.5%) cytoophidium (11.5%)" "CTP synthase activity (11.5%) ATP binding (11.5%) identical protein binding (11.5%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" TNAPSNTVTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (25%) GO:0000428 (25%) "GO:0003677 (25%) GO:0003899 (25%)" DNA-templated transcription (25%) DNA-directed RNA polymerase complex (25%) "DNA binding (25%) DNA-directed RNA polymerase activity (25%)" "IPR006110 (65.7%) IPR036161 (34.3%)" "RNA polymerase, subunit omega/Rpo6/RPB6 (65.7%) RPB6/omega subunit-like superfamily (34.3%)" TVYSTENPDLLVLEFRNDTSAGDGAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) "GO:0006189 (20%) GO:0009236 (19.4%) GO:0006164 (0.1%)" "GO:0005829 (20%) GO:0016020 (0%)" "GO:0004639 (20.1%) GO:0005524 (20.1%) GO:0016874 (0.2%)" "'de novo' IMP biosynthetic process (20%) cobalamin biosynthetic process (19.4%) purine nucleotide biosynthetic process (0.1%)" "cytosol (20%) membrane (0%)" "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (20.1%) ATP binding (20.1%) ligase activity (0.2%)" "IPR028923 (20.3%) IPR050089 (20.2%) IPR018236 (20%)" "SAICAR synthetase/ADE2, N-terminal (20.3%) SAICAR synthetase (20.2%) SAICAR synthetase, conserved site (20%)" SFGAPTITKDGVSVAR root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.2%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (16.4%) GO:1990220 (0.1%) GO:0005829 (0%)" "GO:0005524 (17.2%) GO:0140662 (17.2%) GO:0016853 (16.8%)" "protein refolding (17.2%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (16.4%) GroEL-GroES complex (0.1%) cytosol (0%)" "ATP binding (17.2%) ATP-dependent protein folding chaperone (17.2%) isomerase activity (16.8%)" "IPR001844 (16.9%) IPR002423 (16.9%) IPR027413 (16.9%)" "Chaperonin Cpn60/GroEL (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%) GroEL-like equatorial domain superfamily (16.9%)" VRDVYNINDEKLVMVATDR Pseudomonadati Bacteria Pseudomonadati 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" IAQTLLNLAK root 6.2.-.- (100%) Forming carbon-sulfur bonds (100%) "GO:0045893 (16.4%) GO:0045892 (0%) GO:0006351 (0%)" "GO:0005829 (16.8%) GO:0032993 (16.4%) GO:0005886 (0%)" "GO:0003700 (16.8%) GO:0030552 (16.6%) GO:0043565 (16.3%)" "positive regulation of DNA-templated transcription (16.4%) negative regulation of DNA-templated transcription (0%) DNA-templated transcription (0%)" "cytosol (16.8%) protein-DNA complex (16.4%) plasma membrane (0%)" "DNA-binding transcription factor activity (16.8%) cAMP binding (16.6%) sequence-specific DNA binding (16.3%)" "IPR036388 (11.2%) IPR014710 (11.1%) IPR018490 (11.1%)" "Winged helix-like DNA-binding domain superfamily (11.2%) RmlC-like jelly roll fold (11.1%) Cyclic nucleotide-binding domain superfamily (11.1%)" AIMEHPLIPEDIIVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "4.2.1.1 (75%) 4.2.1.- (25%)" "carbonic anhydrase (75%) Hydro-lyases (25%)" "GO:0004089 (50%) GO:0008270 (50%)" "carbonate dehydratase activity (50%) zinc ion binding (50%)" "IPR001765 (50%) IPR036874 (50%)" "Carbonic anhydrase (50%) Carbonic anhydrase superfamily (50%)" AQFAQYGMLSVPEDVLDNYAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" KQAYDKLQEHGIDALIAIGGDGTLTGAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0016208 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) AMP binding (9.1%)" "IPR000023 (16.7%) IPR012003 (16.7%) IPR012828 (16.7%)" "Phosphofructokinase domain (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic (16.7%)" TDVYENMHAAGVVDPAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.5%) GO:0005737 (15.5%) "GO:0005524 (17.5%) GO:0140662 (17.5%) GO:0016853 (16.5%)" protein refolding (17.5%) cytoplasm (15.5%) "ATP binding (17.5%) ATP-dependent protein folding chaperone (17.5%) isomerase activity (16.5%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" EKVEEGLNKNNAEIQCIPTFILPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0001678 (12.7%) GO:0006006 (12.7%) GO:0006096 (12.7%)" GO:0005829 (11.1%) "GO:0004340 (12.7%) GO:0005524 (12.7%) GO:0005536 (12.7%)" "intracellular glucose homeostasis (12.7%) glucose metabolic process (12.7%) glycolytic process (12.7%)" cytosol (11.1%) "glucokinase activity (12.7%) ATP binding (12.7%) D-glucose binding (12.7%)" "IPR001312 (25%) IPR022672 (25%) IPR022673 (25%)" "Hexokinase (25%) Hexokinase, N-terminal (25%) Hexokinase, C-terminal (25%)" FTFDDAATYISHDKDTR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0003755 (100%) peptidyl-prolyl cis-trans isomerase activity (100%) "IPR000297 (20%) IPR023058 (20%) IPR027304 (20%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (20%) Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site (20%) Trigger factor/SurA domain superfamily (20%)" GLEIIKELGIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" VYSEVIGNIQR root 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.4%) GO:0006002 (14.3%)" GO:0005829 (14.4%) "GO:0003872 (14.4%) GO:0046872 (14.4%) GO:0047334 (14.3%)" "response to glucose (14.4%) fructose 6-phosphate metabolic process (14.3%)" cytosol (14.4%) "6-phosphofructokinase activity (14.4%) metal ion binding (14.4%) diphosphate-fructose-6-phosphate 1-phosphotransferase activity (14.3%)" "IPR000023 (25.3%) IPR035966 (25.3%) IPR022953 (25.1%)" "Phosphofructokinase domain (25.3%) Phosphofructokinase superfamily (25.3%) ATP-dependent 6-phosphofructokinase (25.1%)" VVEHESTPSILGMVDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR005996 (33%) IPR016082 (33%) IPR036919 (33%)" "Large ribosomal subunit protein uL30, bacteria (33%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (33%) Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily (33%)" INELGFISTPYRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.9%) IPR007121 (7.9%) IPR007645 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) RNA polymerase, beta subunit, conserved site (7.9%) RNA polymerase Rpb2, domain 3 (7.9%)" IVNNAKDEGKNICAVGTTVMR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.99.17 (100%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (100%) "GO:0002099 (32.7%) GO:0008616 (2%)" GO:0005737 (32.7%) GO:0051075 (32.7%) "tRNA wobble guanine modification (32.7%) tRNA queuosine(34) biosynthetic process (2%)" cytoplasm (32.7%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity (32.7%) "IPR003699 (25%) IPR036100 (25%) IPR042118 (25%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA (25%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily (25%) QueA, domain 1 (25%)" FSTDLPEFAAAEKEVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (12%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (12%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" QLHFEEAAELAYFGAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.3%) GO:0009090 (17.3%) GO:0009088 (13.5%)" GO:0005829 (17.3%) "GO:0004072 (17.3%) GO:0005524 (17.3%) GO:0016301 (0.2%)" "lysine biosynthetic process via diaminopimelate (17.3%) homoserine biosynthetic process (17.3%) threonine biosynthetic process (13.5%)" cytosol (17.3%) "aspartate kinase activity (17.3%) ATP binding (17.3%) kinase activity (0.2%)" "IPR036393 (13.2%) IPR045865 (13.2%) IPR001048 (13.1%)" "Acetylglutamate kinase-like superfamily (13.2%) ACT-like domain (13.2%) Aspartate/glutamate/uridylate kinase (13.1%)" TIHQLMTEQPEYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.46 (100%) dTDP-glucose 4,6-dehydratase (100%) GO:0009225 (50%) GO:0008460 (50%) nucleotide-sugar metabolic process (50%) dTDP-glucose 4,6-dehydratase activity (50%) "IPR005888 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "dTDP-glucose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" FYPEEEGKPVGIDKEDPAYEDAKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%)" GO:0005829 (16.5%) "GO:0004618 (16.5%) GO:0005524 (16.5%) GO:0043531 (16.5%)" "gluconeogenesis (16.5%) glycolytic process (16.5%)" cytosol (16.5%) "phosphoglycerate kinase activity (16.5%) ATP binding (16.5%) ADP binding (16.5%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" DRYAIDKAFNTLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (25%) GO:0009898 (25%) "GO:0003842 (25%) GO:0004657 (25%)" L-proline catabolic process to L-glutamate (25%) cytoplasmic side of plasma membrane (25%) "L-glutamate gamma-semialdehyde dehydrogenase activity (25%) proline dehydrogenase activity (25%)" "IPR005931 (14.3%) IPR015590 (14.3%) IPR016160 (14.3%)" "Delta-1-pyrroline-5-carboxylate dehydrogenase (14.3%) Aldehyde dehydrogenase domain (14.3%) Aldehyde dehydrogenase, cysteine active site (14.3%)" HSQVFSTAEDNQSAVTIHVLQGERK root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0051301 (0.2%) GO:0006260 (0.1%) GO:0042026 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0005524 (25.7%) GO:0140662 (25.7%) GO:0051082 (24.2%)" "cell division (0.2%) DNA replication (0.1%) protein refolding (0.1%)" "cytosol (0.1%) cytoplasm (0%) plasma membrane (0%)" "ATP binding (25.7%) ATP-dependent protein folding chaperone (25.7%) unfolded protein binding (24.2%)" "IPR013126 (17.1%) IPR029047 (17%) IPR029048 (16.7%)" "Heat shock protein 70 family (17.1%) Heat shock protein 70kD, peptide-binding domain superfamily (17%) Heat shock protein 70kD, C-terminal domain superfamily (16.7%)" NKPIAAICAAPMVLGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.1.2.- (100%) Thiolester hydrolases (100%) GO:0006508 (6.7%) GO:0005737 (84.4%) "GO:0008233 (6.7%) GO:0016787 (2.2%)" proteolysis (6.7%) cytoplasm (84.4%) "peptidase activity (6.7%) hydrolase activity (2.2%)" "IPR002818 (25%) IPR006287 (25%) IPR029062 (25%)" "DJ-1/PfpI (25%) Protein/nucleic acid deglycase DJ-1 (25%) Class I glutamine amidotransferase-like (25%)" FNQLAANQPNTVVLAISK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.11.1.24 (95%) 1.11.1.- (5%)" "thioredoxin-dependent peroxiredoxin (95%) Peroxidases (5%)" GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" KIPAHMIIIASHRPDITTYLLGSNAAAVVR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0007155 (9.1%) GO:1902021 (9.1%)" "GO:0005524 (63.6%) GO:0008859 (9.1%) GO:0016787 (9.1%)" "cell adhesion (9.1%) regulation of bacterial-type flagellum-dependent cell motility (9.1%)" "ATP binding (63.6%) exoribonuclease II activity (9.1%) hydrolase activity (9.1%)" "IPR006015 (33.3%) IPR006016 (33.3%) IPR014729 (33.3%)" "Universal stress protein A family (33.3%) UspA (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (33.3%)" IDRFGVVQPNIQSLEDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006605 (19.7%) GO:0043952 (19.7%) GO:0065002 (19.7%)" GO:0005886 (20.2%) GO:0015450 (20%) "protein targeting (19.7%) protein transport by the Sec complex (19.7%) intracellular protein transmembrane transport (19.7%)" plasma membrane (20.2%) protein-transporting ATPase activity (20%) "IPR022813 (11.2%) IPR048631 (11.2%) IPR005791 (11.1%)" "Protein-export membrane protein SecD/SecF, archaeal and bacterial (11.2%) Protein translocase subunit SecDF, P1 domain, N-terminal (11.2%) Protein translocase subunit SecD (11.1%)" DTRGPIASIAYQGLMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0017038 (49.2%) "GO:0005886 (49.2%) GO:0016020 (1.6%)" protein import (49.2%) "plasma membrane (49.2%) membrane (1.6%)" "IPR002898 (50%) IPR050790 (50%)" "MotA/TolQ/ExbB proton channel (50%) ExbB/TolQ Biopolymer Transport (50%)" CGHKPLALIGGATGMIGDPSGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) "GO:0006437 (16.7%) GO:0043039 (0.1%)" GO:0005829 (16.7%) "GO:0003723 (16.7%) GO:0004831 (16.7%) GO:0005524 (16.7%)" "tyrosyl-tRNA aminoacylation (16.7%) tRNA aminoacylation (0.1%)" cytosol (16.7%) "RNA binding (16.7%) tyrosine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR001412 (12.5%) IPR002305 (12.5%) IPR002307 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Aminoacyl-tRNA synthetase, class Ic (12.5%) Tyrosine-tRNA ligase (12.5%)" RVEIDPSLLEDDKEMLEDLVAAAFNDAAR root "GO:0006281 (0.1%) GO:0006310 (0.1%) GO:0006950 (0.1%)" "GO:0005829 (33.5%) GO:0043590 (32.5%)" "GO:0003677 (33.5%) GO:0003887 (0.1%) GO:0008270 (0.1%)" "DNA repair (0.1%) DNA recombination (0.1%) response to stress (0.1%)" "cytosol (33.5%) bacterial nucleoid (32.5%)" "DNA binding (33.5%) DNA-directed DNA polymerase activity (0.1%) zinc ion binding (0.1%)" "IPR004401 (49.8%) IPR036894 (49.8%) IPR015967 (0.1%)" "Nucleoid-associated protein YbaB/EbfC (49.8%) Nucleoid-associated protein YbaB-like domain superfamily (49.8%) Recombination protein RecR, zinc finger domain (0.1%)" LTKDNSELYASLPEGVAR DMQFVSNASCTTNCLAPIAK Bacteria Bacteria 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (23.1%) GO:0006096 (7.7%)" "GO:0050661 (23.1%) GO:0051287 (23.1%) GO:0016620 (15.4%)" "glucose metabolic process (23.1%) glycolytic process (7.7%)" "NADP binding (23.1%) NAD binding (23.1%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (15.4%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" QWGSPTPGHPEVDIMR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.2.1.1 (97.8%) 2.2.1.- (2.2%)" "transketolase (97.8%) Transketolases and transaldolases (2.2%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.8%) IPR029061 (12.8%) IPR033247 (12.8%)" "Transketolase, N-terminal (12.8%) Thiamin diphosphate-binding fold (12.8%) Transketolase family (12.8%)" QLEGLPESSLESYAQTAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.4.15.5 (50%) 3.4.24.- (37.5%) 3.4.-.- (12.5%)" "peptidyl-dipeptidase Dcp (50%) Metalloendopeptidases (37.5%) Acting on peptide bonds (peptidases) (12.5%)" GO:0006508 (19.3%) GO:0005829 (19.3%) "GO:0004180 (19.3%) GO:0004222 (19.3%) GO:0046872 (19.3%)" proteolysis (19.3%) cytosol (19.3%) "carboxypeptidase activity (19.3%) metalloendopeptidase activity (19.3%) metal ion binding (19.3%)" "IPR001567 (17%) IPR034005 (17%) IPR045090 (17%)" "Peptidase M3A/M3B catalytic domain (17%) Peptidyl-dipeptidase DCP (17%) Peptidase M3A/M3B (17%)" KGVAVVGLPGDLAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.5.1 (80%) 1.2.2.2 (20%)" "pyruvate dehydrogenase (quinone) (80%) Deleted entry (20%)" GO:0019752 (24.7%) "GO:0000287 (25.3%) GO:0030976 (25.3%) GO:0003824 (18.5%)" carboxylic acid metabolic process (24.7%) "magnesium ion binding (25.3%) thiamine pyrophosphate binding (25.3%) catalytic activity (18.5%)" "IPR012000 (11.3%) IPR029035 (11.3%) IPR029061 (11.3%)" "Thiamine pyrophosphate enzyme, central domain (11.3%) DHS-like NAD/FAD-binding domain superfamily (11.3%) Thiamin diphosphate-binding fold (11.3%)" ANLIAQLTAPVR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0006633 (32.9%) GO:0005829 (32.9%) GO:0004314 (34.3%) fatty acid biosynthetic process (32.9%) cytosol (32.9%) [acyl-carrier-protein] S-malonyltransferase activity (34.3%) "IPR001227 (14.3%) IPR014043 (14.3%) IPR016035 (14.3%)" "Acyl transferase domain superfamily (14.3%) Acyl transferase domain (14.3%) Acyl transferase/acyl hydrolase/lysophospholipase (14.3%)" VVEKADNAAQVK root "GO:0022900 (19.7%) GO:0006508 (0.3%) GO:0071555 (0.3%)" "GO:0042597 (19.4%) GO:0005829 (0.3%)" "GO:0005506 (19.7%) GO:0009055 (19.7%) GO:0020037 (19.7%)" "electron transport chain (19.7%) proteolysis (0.3%) cell wall organization (0.3%)" "periplasmic space (19.4%) cytosol (0.3%)" "iron ion binding (19.7%) electron transfer activity (19.7%) heme binding (19.7%)" "IPR009155 (46%) IPR010980 (46%) IPR000713 (0.7%)" "Cytochrome b562 (46%) Cytochrome c/b562 (46%) Mur ligase, N-terminal catalytic domain (0.7%)" VSDNNFSIVYVYDIAGKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.21.- (100%) Serine endopeptidases (100%) GO:0006508 (32.8%) GO:0005737 (32.8%) "GO:0008236 (32.8%) GO:0003743 (1.6%)" proteolysis (32.8%) cytoplasm (32.8%) "serine-type peptidase activity (32.8%) translation initiation factor activity (1.6%)" "IPR005151 (12.5%) IPR011659 (12.5%) IPR012393 (12.5%)" "Tail specific protease (12.5%) WD40-like beta-propeller (12.5%) Tricorn protease (12.5%)" FQLEYTGADNQK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.5%) GO:0005737 (16.5%) "GO:0000049 (16.5%) GO:0004829 (16.5%) GO:0005524 (16.5%)" threonyl-tRNA aminoacylation (16.5%) cytoplasm (16.5%) "tRNA binding (16.5%) threonine-tRNA ligase activity (16.5%) ATP binding (16.5%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" DANPGVDFMPLQVEYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8.2%) IPR003029 (8.2%) IPR004087 (8.2%)" "Exoribonuclease, phosphorolytic domain 1 (8.2%) S1 domain (8.2%) K Homology domain (8.2%)" DSGNNNPGNTGGENIR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0016740 (100%) transferase activity (100%) IPR018337 (100%) Cell wall/choline-binding repeat (100%) TGAGMMDCK root "GO:0070125 (5.2%) GO:0006644 (0.1%) GO:0050482 (0.1%)" "GO:0005737 (35.1%) GO:0005739 (6.4%) GO:0009507 (5.1%)" "GO:0003746 (42%) GO:0003729 (4.8%) GO:0003676 (0.1%)" "mitochondrial translational elongation (5.2%) phospholipid metabolic process (0.1%) arachidonate secretion (0.1%)" "cytoplasm (35.1%) mitochondrion (6.4%) chloroplast (5.1%)" "translation elongation factor activity (42%) mRNA binding (4.8%) nucleic acid binding (0.1%)" "IPR001816 (19.1%) IPR018101 (19%) IPR009060 (19%)" "Translation elongation factor EFTs/EF1B (19.1%) Translation elongation factor Ts, conserved site (19%) UBA-like superfamily (19%)" KLLDQGEAGDNVGLLLR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0006414 (0.1%) "GO:0005829 (15.7%) GO:0032045 (5.1%) GO:0005737 (2.2%)" "GO:0003746 (18.4%) GO:0005525 (18.4%) GO:0003924 (18%)" translational elongation (0.1%) "cytosol (15.7%) guanyl-nucleotide exchange factor complex (5.1%) cytoplasm (2.2%)" "translation elongation factor activity (18.4%) GTP binding (18.4%) GTPase activity (18%)" "IPR004161 (8.5%) IPR009000 (8.5%) IPR050055 (8.5%)" "Translation elongation factor EFTu-like, domain 2 (8.5%) Translation protein, beta-barrel domain superfamily (8.5%) Elongation factor Tu GTPase (8.5%)" RAASEAVKDAALSCDQFFVNHR root "GO:0006412 (32.2%) GO:0000028 (0.5%) GO:0002181 (0.3%)" "GO:0022627 (32.4%) GO:0005840 (1.6%) GO:0005737 (0.3%)" "GO:0003735 (32.4%) GO:0008270 (0.3%)" "translation (32.2%) ribosomal small subunit assembly (0.5%) cytoplasmic translation (0.3%)" "cytosolic small ribosomal subunit (32.4%) ribosome (1.6%) cytoplasm (0.3%)" "structural constituent of ribosome (32.4%) zinc ion binding (0.3%)" "IPR001865 (25.1%) IPR005706 (25.1%) IPR023591 (25.1%)" "Small ribosomal subunit protein uS2 (25.1%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.1%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.1%)" KGTYFLADTLINRHPDTSTLIDIAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (17.5%) "GO:0016746 (17.5%) GO:0046872 (17.5%) GO:0051287 (17.5%)" malate metabolic process (17.5%) "acyltransferase activity (17.5%) metal ion binding (17.5%) NAD binding (17.5%)" "IPR002505 (9.1%) IPR012188 (9.1%) IPR012301 (9.1%)" "Phosphate acetyl/butaryl transferase (9.1%) NAD(P)-dependent malic enzyme (9.1%) Malic enzyme, N-terminal domain (9.1%)" KEVINEAELIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.95 (62.5%) 1.1.1.290 (25%) 1.1.1.81 (12.5%)" "phosphoglycerate dehydrogenase (62.5%) 4-phosphoerythronate dehydrogenase (25%) hydroxypyruvate reductase (12.5%)" GO:0006564 (0.8%) "GO:0051287 (49.6%) GO:0016616 (36.8%) GO:0004617 (9%)" L-serine biosynthetic process (0.8%) "NAD binding (49.6%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (36.8%) phosphoglycerate dehydrogenase activity (9%)" "IPR006139 (32.4%) IPR006140 (32.4%) IPR036291 (32.4%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (32.4%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (32.4%) NAD(P)-binding domain superfamily (32.4%)" ADVHLEADIHAVEGNK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales GO:0046872 (100%) metal ion binding (100%) "IPR018470 (50%) IPR038482 (50%)" "Periplasmic metal-binding protein Tp34-type (50%) Periplasmic metal-binding protein Tp34-type superfamily (50%)" MIQEQTMLNVADNSGAR root "GO:0006412 (24.9%) GO:0002181 (0%)" "GO:0022625 (24.7%) GO:0005840 (0.4%) GO:1990904 (0.1%)" "GO:0003735 (24.9%) GO:0070180 (24.7%) GO:0019843 (0.1%)" "translation (24.9%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.7%) ribosome (0.4%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.9%) large ribosomal subunit rRNA binding (24.7%) rRNA binding (0.1%)" "IPR000218 (25.1%) IPR036853 (25.1%) IPR005745 (24.7%)" "Large ribosomal subunit protein uL14 (25.1%) Large ribosomal subunit protein uL14 superfamily (25.1%) Large ribosomal subunit protein uL14, bacteria (24.7%)" WKEKHPIYGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0022627 (24.7%) GO:0005840 (0.3%) GO:1990904 (0.3%)" "GO:0003735 (25%) GO:0019843 (24.7%)" translation (25%) "cytosolic small ribosomal subunit (24.7%) ribosome (0.3%) ribonucleoprotein complex (0.3%)" "structural constituent of ribosome (25%) rRNA binding (24.7%)" "IPR000266 (25.2%) IPR012340 (25.2%) IPR019979 (24.8%)" "Small ribosomal subunit protein uS17 (25.2%) Nucleic acid-binding, OB-fold (25.2%) Small ribosomal subunit protein uS17, conserved site (24.8%)" WHCQHAKPGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) FTGEVSLTGQPFVMEPSK root GO:0006414 (0.2%) "GO:0005737 (49.1%) GO:0005739 (0.1%) GO:0005829 (0.1%)" "GO:0003746 (50%) GO:0005085 (0.1%) GO:0008270 (0.1%)" translational elongation (0.2%) "cytoplasm (49.1%) mitochondrion (0.1%) cytosol (0.1%)" "translation elongation factor activity (50%) guanyl-nucleotide exchange factor activity (0.1%) zinc ion binding (0.1%)" "IPR001816 (20.3%) IPR014039 (20.3%) IPR036402 (20.3%)" "Translation elongation factor EFTs/EF1B (20.3%) Translation elongation factor EFTs/EF1B, dimerisation (20.3%) Elongation factor Ts, dimerisation domain superfamily (20.3%)" AANMPEQMIQNIAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" MFTGSIVALVTPMDEKGNVCR Bacteria Bacteria "4.3.3.7 (98.6%) 4.2.1.52 (0.9%) 4.-.-.- (0.5%)" "4-hydroxy-tetrahydrodipicolinate synthase (98.6%) Transferred entry: 4.3.3.7 (0.9%) Lyases (0.5%)" "GO:0009089 (24.2%) GO:0019877 (24.2%) GO:0019262 (0.1%)" GO:0005829 (24.9%) "GO:0008840 (25.1%) GO:0016829 (1.1%) GO:0008747 (0.1%)" "lysine biosynthetic process via diaminopimelate (24.2%) diaminopimelate biosynthetic process (24.2%) N-acetylneuraminate catabolic process (0.1%)" cytosol (24.9%) "4-hydroxy-tetrahydrodipicolinate synthase activity (25.1%) lyase activity (1.1%) N-acetylneuraminate lyase activity (0.1%)" "IPR002220 (20.4%) IPR013785 (20.4%) IPR020624 (20.1%)" "DapA-like (20.4%) Aldolase-type TIM barrel (20.4%) Schiff base-forming aldolase, conserved site (20.1%)" VYANADNKPAEYNADNKPYTPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.14.- (100%) Dipeptidyl-peptidases and tripeptidyl-peptidases (100%) "GO:0006508 (25%) GO:0043171 (25%)" "GO:0008239 (25%) GO:0070009 (25%)" "proteolysis (25%) peptide catabolic process (25%)" "dipeptidyl-peptidase activity (25%) serine-type aminopeptidase activity (25%)" "IPR009003 (33.3%) IPR019500 (33.3%) IPR043504 (33.3%)" "Peptidase S1, PA clan (33.3%) Peptidase S46 (33.3%) Peptidase S1, PA clan, chymotrypsin-like fold (33.3%)" ITGIRPEFIQLDLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR036291 (34.3%) IPR001509 (31.4%) IPR005886 (31.4%)" "NAD(P)-binding domain superfamily (34.3%) NAD-dependent epimerase/dehydratase (31.4%) UDP-glucose 4-epimerase (31.4%)" LAEKNGMKVAVIGSGPAGLSFAGDMAK IVVDCANGATYHIAPNVLR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "5.4.2.10 (99.7%) 5.4.2.- (0.3%)" "phosphoglucosamine mutase (99.7%) Phosphotransferases (phosphomutases) (0.3%)" "GO:0005975 (14.3%) GO:0009252 (14.2%) GO:0006048 (14.2%)" GO:0005829 (14.2%) "GO:0008966 (14.3%) GO:0004615 (14.2%) GO:0000287 (14.1%)" "carbohydrate metabolic process (14.3%) peptidoglycan biosynthetic process (14.2%) UDP-N-acetylglucosamine biosynthetic process (14.2%)" cytosol (14.2%) "phosphoglucosamine mutase activity (14.3%) phosphomannomutase activity (14.2%) magnesium ion binding (14.1%)" "IPR016055 (10.2%) IPR005841 (10.1%) IPR050060 (10.1%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (10.2%) Alpha-D-phosphohexomutase superfamily (10.1%) Phosphoglucosamine mutase (10.1%)" LLKEEGYSFDFAYTSVLKR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "5.4.2.11 (99.3%) 5.4.2.- (0.7%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (99.3%) Phosphotransferases (phosphomutases) (0.7%)" "GO:0006094 (32.6%) GO:0006096 (32.3%) GO:0061621 (0.3%)" "GO:0005737 (0.3%) GO:0005829 (0.3%)" "GO:0004619 (32.3%) GO:0016853 (1%) GO:0005524 (0.3%)" "gluconeogenesis (32.6%) glycolytic process (32.3%) canonical glycolysis (0.3%)" "cytoplasm (0.3%) cytosol (0.3%)" "phosphoglycerate mutase activity (32.3%) isomerase activity (1%) ATP binding (0.3%)" "IPR005952 (25%) IPR013078 (25%) IPR029033 (25%)" "Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%) Histidine phosphatase superfamily (25%)" CIIDNCVHPDYKPLLEEYLAMGIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" VECATNRPIWPQGLNAPEKVDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (87.5%) GO:0050112 (12.5%)" "nucleotide binding (87.5%) inositol 2-dehydrogenase (NAD+) activity (12.5%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" LYNDAGISNDR root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (24.9%) GO:0006098 (24.8%) GO:0009052 (0.1%)" "GO:0005829 (24.9%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0004801 (24.9%) GO:0016740 (0.2%) GO:0005509 (0%)" "carbohydrate metabolic process (24.9%) pentose-phosphate shunt (24.8%) pentose-phosphate shunt, non-oxidative branch (0.1%)" "cytosol (24.9%) cytoplasm (0%) membrane (0%)" "transaldolase activity (24.9%) transferase activity (0.2%) calcium ion binding (0%)" "IPR001585 (25.1%) IPR013785 (25.1%) IPR018225 (25.1%)" "Transaldolase/Fructose-6-phosphate aldolase (25.1%) Aldolase-type TIM barrel (25.1%) Transaldolase, active site (25.1%)" IEGDDFPTIPVGDSDALK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.4.21.107 (66.7%) 3.4.21.- (16.7%) 3.4.21.108 (16.7%)" "peptidase Do (66.7%) Serine endopeptidases (16.7%) HtrA2 peptidase (16.7%)" GO:0006508 (47.6%) GO:0042597 (2.4%) "GO:0004252 (47.6%) GO:0003676 (2.4%)" proteolysis (47.6%) periplasmic space (2.4%) "serine-type endopeptidase activity (47.6%) nucleic acid binding (2.4%)" "IPR001478 (23.1%) IPR001940 (23.1%) IPR009003 (23.1%)" "PDZ domain (23.1%) Peptidase S1C (23.1%) Peptidase S1, PA clan (23.1%)" NVMVVAGGASAK Clostridia Bacteria Bacillati Bacillota Clostridia "1.21.4.2 (52.6%) 1.21.4.4 (26.3%) 1.21.4.3 (15.8%)" "glycine reductase (52.6%) betaine reductase (26.3%) sarcosine reductase (15.8%)" GO:0006633 (35.7%) "GO:0004315 (35.7%) GO:0030699 (10.7%) GO:0033795 (7.1%)" fatty acid biosynthetic process (35.7%) "3-oxoacyl-[acyl-carrier-protein] synthase activity (35.7%) glycine reductase activity (10.7%) betaine reductase activity (7.1%)" "IPR013751 (30.8%) IPR016039 (30.8%) IPR045984 (30.8%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (30.8%) Thiolase-like (30.8%) Domain of unknown function DUF5940 (30.8%)" YYRPENAFEHSVLTRLEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.9%) GO:0006044 (32.9%)" "GO:0004342 (32.9%) GO:0016853 (1.4%)" "carbohydrate metabolic process (32.9%) N-acetylglucosamine metabolic process (32.9%)" "glucosamine-6-phosphate deaminase activity (32.9%) isomerase activity (1.4%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" QQASLEEQNNDALSPAIR Pseudomonadati Bacteria Pseudomonadati "2.3.1.61 (98.1%) 2.3.1.- (1.9%)" "dihydrolipoyllysine-residue succinyltransferase (98.1%) Transferring groups other than amino-acyl groups (1.9%)" "GO:0006099 (19.9%) GO:0033512 (19.2%) GO:0006554 (0.2%)" "GO:0005829 (19.9%) GO:0045252 (19.3%) GO:0005737 (0.3%)" "GO:0004149 (20.2%) GO:0031405 (0.3%) GO:0016407 (0.3%)" "tricarboxylic acid cycle (19.9%) L-lysine catabolic process to acetyl-CoA via saccharopine (19.2%) lysine catabolic process (0.2%)" "cytosol (19.9%) oxoglutarate dehydrogenase complex (19.3%) cytoplasm (0.3%)" "dihydrolipoyllysine-residue succinyltransferase activity (20.2%) lipoic acid binding (0.3%) acetyltransferase activity (0.3%)" "IPR036625 (11.2%) IPR000089 (11.2%) IPR004167 (11.2%)" "E3-binding domain superfamily (11.2%) Biotin/lipoyl attachment (11.2%) Peripheral subunit-binding domain (11.2%)" IVNNEKFPIQFVFTGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" QVPSVDALLDMGHGVNLTRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0000166 (25%) GO:0047850 (25%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "nucleotide binding (25%) diaminopimelate dehydrogenase activity (25%)" "IPR000683 (25%) IPR010190 (25%) IPR032094 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Diaminopimelate dehydrogenase, Ddh (25%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25%)" VIHILIQLIEKEMVK root "5.3.1.28 (99.1%) 5.3.1.- (0.9%)" "D-sedoheptulose-7-phosphate isomerase (99.1%) Interconverting aldoses and ketoses (0.9%)" "GO:2001061 (14%) GO:0009244 (11.5%) GO:0005975 (5%)" "GO:0005737 (16.5%) GO:0005829 (0.1%) GO:0032991 (0%)" "GO:0097367 (16.8%) GO:0008968 (16.5%) GO:0008270 (16.2%)" "D-glycero-D-manno-heptose 7-phosphate biosynthetic process (14%) lipopolysaccharide core region biosynthetic process (11.5%) carbohydrate metabolic process (5%)" "cytoplasm (16.5%) cytosol (0.1%) protein-containing complex (0%)" "carbohydrate derivative binding (16.8%) D-sedoheptulose 7-phosphate isomerase activity (16.5%) zinc ion binding (16.2%)" "IPR046348 (20.1%) IPR050099 (20.1%) IPR001347 (20%)" "SIS domain superfamily (20.1%) SIS family GmhA and DiaA subfamilies (20.1%) SIS domain (20%)" KYHAHDENNECNIGDTVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022627 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000266 (25%) IPR012340 (25%) IPR019979 (25%)" "Small ribosomal subunit protein uS17 (25%) Nucleic acid-binding, OB-fold (25%) Small ribosomal subunit protein uS17, conserved site (25%)" LADYPTVAIGGISLAR root 2.5.1.3 (100%) thiamine phosphate synthase (100%) "GO:0009228 (19.7%) GO:0009229 (19.2%)" "GO:0005737 (19.7%) GO:0005829 (0.2%)" "GO:0004789 (19.9%) GO:0000287 (18.4%) GO:0046872 (1%)" "thiamine biosynthetic process (19.7%) thiamine diphosphate biosynthetic process (19.2%)" "cytoplasm (19.7%) cytosol (0.2%)" "thiamine-phosphate diphosphorylase activity (19.9%) magnesium ion binding (18.4%) metal ion binding (1%)" "IPR013785 (24.5%) IPR022998 (24.5%) IPR036206 (24.5%)" "Aldolase-type TIM barrel (24.5%) Thiamine phosphate synthase/TenI (24.5%) Thiamin phosphate synthase superfamily (24.5%)" FGTCPHSGFGLGFER Bacteroidota Bacteria Pseudomonadati Bacteroidota "6.1.1.22 (99.2%) 6.1.1.- (0.8%)" "asparagine--tRNA ligase (99.2%) Ligases forming aminoacyl-tRNA and related compounds (0.8%)" GO:0006421 (20.4%) GO:0005737 (19.4%) "GO:0005524 (20.4%) GO:0004816 (19.5%) GO:0003676 (19.4%)" asparaginyl-tRNA aminoacylation (20.4%) cytoplasm (19.4%) "ATP binding (20.4%) asparagine-tRNA ligase activity (19.5%) nucleic acid binding (19.4%)" "IPR004364 (14.7%) IPR045864 (14.7%) IPR002312 (14.3%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (14.7%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.7%) Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.3%)" GISEQQIAEQLACFEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.22 (100%) ribosylnicotinamide kinase (100%) "GO:0016301 (66.7%) GO:0050262 (33.3%)" "kinase activity (66.7%) ribosylnicotinamide kinase activity (33.3%)" "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" VVLASNGSQVTVSPR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales GO:0009279 (100%) cell outer membrane (100%) "IPR008816 (50%) IPR051407 (50%)" "Glycine zipper 2TM domain (50%) Bacterial outer membrane lipoprotein and surface antigen (50%)" NKQLLASGVGQTSR Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" NSQGELVGFDIDLAK Bacteria Bacteria 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (47.9%) GO:1903810 (0.5%)" "GO:0030288 (49.8%) GO:0016020 (0.5%) GO:0055052 (0.5%)" "GO:0016597 (0.5%) GO:0016787 (0.5%)" "amino acid transport (47.9%) L-histidine import across plasma membrane (0.5%)" "outer membrane-bounded periplasmic space (49.8%) membrane (0.5%) ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing (0.5%)" "amino acid binding (0.5%) hydrolase activity (0.5%)" "IPR001638 (35%) IPR018313 (34.4%) IPR005768 (30.7%)" "Solute-binding protein family 3/N-terminal domain of MltF (35%) Solute-binding protein family 3, conserved site (34.4%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (30.7%)" TDNDMGAGLQNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.1%) IPR006101 (7.1%) IPR006102 (7.1%)" "Beta galactosidase small chain/ domain 5 (7.1%) Glycoside hydrolase, family 2 (7.1%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.1%)" YTQSNSVCYVKDGQAIGIGAGQQSR Bacteria Bacteria "2.1.2.3 (95%) 3.5.4.10 (5%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (95%) IMP cyclohydrolase (5%)" GO:0006189 (25%) "GO:0005829 (24.9%) GO:0005840 (0.1%)" "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) "cytosol (24.9%) ribosome (0.1%)" "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (25.1%) IPR016193 (25%) IPR024051 (25%)" "Bifunctional purine biosynthesis protein PurH-like (25.1%) Cytidine deaminase-like (25%) AICAR transformylase, duplicated domain superfamily (25%)" SQATLVFGQMNEPPGAR root "7.1.2.2 (98.8%) 3.6.3.14 (1.2%)" "H(+)-transporting two-sector ATPase (98.8%) Transferred entry: 7.1.2.2 (1.2%)" "GO:0045259 (24.3%) GO:0005886 (21.9%)" "GO:0005524 (24.3%) GO:0046933 (24.3%) GO:0016787 (4.4%)" "proton-transporting ATP synthase complex (24.3%) plasma membrane (21.9%)" "ATP binding (24.3%) proton-transporting ATP synthase activity, rotational mechanism (24.3%) hydrolase activity (4.4%)" "IPR000194 (10.2%) IPR027417 (10.2%) IPR050053 (10.2%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.2%) P-loop containing nucleoside triphosphate hydrolase (10.2%) ATPase alpha/beta chains (10.2%)" MTENINLTDALKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.6.2.4 (100%) DNA 3'-5' helicase (100%) "GO:0006260 (8.3%) GO:0006281 (8.3%) GO:0006310 (8.3%)" "GO:0005737 (8.3%) GO:0030894 (8.3%) GO:0043590 (8.3%)" "GO:0003677 (8.3%) GO:0005524 (8.3%) GO:0009378 (8.3%)" "DNA replication (8.3%) DNA repair (8.3%) DNA recombination (8.3%)" "cytoplasm (8.3%) replisome (8.3%) bacterial nucleoid (8.3%)" "DNA binding (8.3%) ATP binding (8.3%) four-way junction helicase activity (8.3%)" "IPR001650 (7.1%) IPR002121 (7.1%) IPR004589 (7.1%)" "Helicase, C-terminal domain-like (7.1%) HRDC domain (7.1%) DNA helicase, ATP-dependent, RecQ type (7.1%)" ADQVLQDKLR Bacteria Bacteria "1.8.1.- (94.7%) 1.6.4.- (5.3%)" "With NAD(+) or NADP(+) as acceptor (94.7%) With a disulfide as acceptor (5.3%)" "GO:0000302 (14%) GO:0006979 (0.1%) GO:0042744 (0.1%)" "GO:0005829 (14.1%) GO:0032991 (14%) GO:0009321 (0.1%)" "GO:0016668 (14.4%) GO:0050660 (14.4%) GO:0051287 (14%)" "response to reactive oxygen species (14%) response to oxidative stress (0.1%) hydrogen peroxide catabolic process (0.1%)" "cytosol (14.1%) protein-containing complex (14%) alkyl hydroperoxide reductase complex (0.1%)" "oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (14.4%) flavin adenine dinucleotide binding (14.4%) NAD binding (14%)" "IPR036188 (11.5%) IPR023753 (11.4%) IPR050097 (11.4%)" "FAD/NAD(P)-binding domain superfamily (11.5%) FAD/NAD(P)-binding domain (11.4%) Ferredoxin--NADP reductase type 2 (11.4%)" ITGVIPVDQAVEQMK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.1 (70.6%) 1.2.7.- (29.4%)" "pyruvate synthase (70.6%) With an iron-sulfur protein as acceptor (29.4%)" "GO:0006979 (14.9%) GO:0022900 (14.9%) GO:0044281 (10.4%)" "GO:0005506 (14.9%) GO:0030976 (14.9%) GO:0051539 (14.9%)" "response to oxidative stress (14.9%) electron transport chain (14.9%) small molecule metabolic process (10.4%)" "iron ion binding (14.9%) thiamine pyrophosphate binding (14.9%) 4 iron, 4 sulfur cluster binding (14.9%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" LSEEGIGMETIDEIERR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (25%) IPR018211 (25%) IPR044731 (25%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (25%) Alcohol dehydrogenase, iron-type, conserved site (25%) Butanol dehydrogenase-like (25%)" ERTGVVTSNKMDK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (24.7%) "GO:0022627 (24.7%) GO:0005840 (1.4%)" "GO:0003735 (24.7%) GO:0019843 (24.7%)" translation (24.7%) "cytosolic small ribosomal subunit (24.7%) ribosome (1.4%)" "structural constituent of ribosome (24.7%) rRNA binding (24.7%)" "IPR000266 (25%) IPR012340 (25%) IPR019979 (25%)" "Small ribosomal subunit protein uS17 (25%) Nucleic acid-binding, OB-fold (25%) Small ribosomal subunit protein uS17, conserved site (25%)" IIGDNTDKYCQAYFSYDSKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (86.4%) 1.2.7.- (9.1%) 1.2.1.51 (4.5%)" "pyruvate synthase (86.4%) With an iron-sulfur protein as acceptor (9.1%) pyruvate dehydrogenase (NADP(+)) (4.5%)" "GO:0006979 (15%) GO:0022900 (15%) GO:0044281 (11%)" "GO:0005506 (15%) GO:0051539 (15%) GO:0030976 (14.2%)" "response to oxidative stress (15%) electron transport chain (15%) small molecule metabolic process (11%)" "iron ion binding (15%) 4 iron, 4 sulfur cluster binding (15%) thiamine pyrophosphate binding (14.2%)" "IPR002869 (7.8%) IPR009014 (7.8%) IPR011895 (7.8%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.8%) Pyruvate-flavodoxin oxidoreductase (7.8%)" TCIEAMAAALGHTQSLHTNALDEAIALPTDFSAR Bacteria Bacteria 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (19.9%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (19.9%)" "IPR006098 (16.8%) IPR006099 (16.8%) IPR016176 (16.8%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.8%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.8%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (16.8%)" EPIKNEANNGLK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (31.9%) GO:0061077 (0.4%)" "GO:0005737 (31.9%) GO:0005829 (0.4%)" "GO:0003755 (34.2%) GO:0016853 (1.2%)" "protein folding (31.9%) obsolete chaperone-mediated protein folding (0.4%)" "cytoplasm (31.9%) cytosol (0.4%)" "peptidyl-prolyl cis-trans isomerase activity (34.2%) isomerase activity (1.2%)" "IPR002130 (20.4%) IPR029000 (20.4%) IPR044665 (20.4%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (20.4%) Cyclophilin-like domain superfamily (20.4%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, E. coli cyclophilin A-like (20.4%)" ADVPGAWTIEDGAIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) VLSGGVDANALHKPK root "3.6.4.- (99.7%) 3.6.1.- (0.3%)" "Acting on ATP; involved in cellular and subcellular movement (99.7%) In phosphorus-containing anhydrides (0.3%)" GO:0006353 (14.4%) GO:0005829 (13.8%) "GO:0003723 (14.4%) GO:0005524 (14.4%) GO:0008186 (14.4%)" DNA-templated transcription termination (14.4%) cytosol (13.8%) "RNA binding (14.4%) ATP binding (14.4%) ATP-dependent activity, acting on RNA (14.4%)" "IPR004665 (10.3%) IPR027417 (10.3%) IPR000194 (10.3%)" "Transcription termination factor Rho (10.3%) P-loop containing nucleoside triphosphate hydrolase (10.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.3%)" ISLTDASELEELLSAEDYQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0019464 (26.3%) GO:0009249 (21.1%)" "GO:0005829 (26.3%) GO:0005960 (26.3%)" "glycine decarboxylation via glycine cleavage system (26.3%) protein lipoylation (21.1%)" "cytosol (26.3%) glycine cleavage complex (26.3%)" "IPR000089 (16.7%) IPR002930 (16.7%) IPR003016 (16.7%)" "Biotin/lipoyl attachment (16.7%) Glycine cleavage system H-protein (16.7%) 2-oxo acid dehydrogenase, lipoyl-binding site (16.7%)" VYAGGNTSPR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR012910 (12.8%) IPR023996 (12.8%) IPR023997 (12.8%)" "TonB-dependent receptor, plug domain (12.8%) TonB-dependent outer membrane protein, SusC/RagA (12.8%) TonB-dependent outer membrane protein SusC/RagA, conserved site (12.8%)" VQQAIDTITLLQMEIEELKEK root "GO:0043093 (30.7%) GO:0000917 (30.7%) GO:0016192 (3.7%)" "GO:0005737 (30.7%) GO:0016020 (3.7%) GO:0005829 (0%)" GO:0042802 (0%) "FtsZ-dependent cytokinesis (30.7%) division septum assembly (30.7%) vesicle-mediated transport (3.7%)" "cytoplasm (30.7%) membrane (3.7%) cytosol (0%)" identical protein binding (0%) "IPR009252 (88.9%) IPR010989 (11.1%)" "Cell division protein ZapB (88.9%) SNARE (11.1%)" TYVKGTQFVSNASCTTNCLAPIAK Pseudomonadati Bacteria Pseudomonadati 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0006006 (24.8%) "GO:0051287 (25%) GO:0050661 (24.8%) GO:0016620 (13.4%)" glucose metabolic process (24.8%) "NAD binding (25%) NADP binding (24.8%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (13.4%)" "IPR020830 (16.8%) IPR020831 (16.8%) IPR020828 (16.7%)" "Glyceraldehyde 3-phosphate dehydrogenase, active site (16.8%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (16.8%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%)" YYEDIKKVEVSLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR003489 (50%) IPR036567 (50%)" "Ribosome hibernation promoting factor/RaiA (50%) Ribosome hibernation promotion factor-like (50%)" GADDDKGQGMIQVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.4.13.- (87.5%) 3.5.1.- (12.5%)" "Dipeptidases (87.5%) In linear amides (12.5%)" "GO:0046872 (50%) GO:0016787 (36.4%) GO:0016805 (13.6%)" "metal ion binding (50%) hydrolase activity (36.4%) dipeptidase activity (13.6%)" "IPR002933 (33.3%) IPR011650 (33.3%) IPR051458 (33.3%)" "Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%) Cytosolic and Metallo Dipeptidase (33.3%)" RLDITESTVK root 2.7.13.3 (100%) histidine kinase (100%) "GO:0006355 (20.8%) GO:0000160 (20%) GO:0042128 (18.8%)" "GO:0005886 (0.1%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003677 (20.8%) GO:0000166 (18.6%) GO:0005524 (0.2%)" "regulation of DNA-templated transcription (20.8%) phosphorelay signal transduction system (20%) nitrate assimilation (18.8%)" "plasma membrane (0.1%) cytosol (0%) membrane (0%)" "DNA binding (20.8%) nucleotide binding (18.6%) ATP binding (0.2%)" "IPR000792 (16.8%) IPR016032 (16.8%) IPR036388 (16.7%)" "Transcription regulator LuxR, C-terminal (16.8%) Signal transduction response regulator, C-terminal effector (16.8%) Winged helix-like DNA-binding domain superfamily (16.7%)" VMIHQPLGGVEGQASDIEITAR Alistipes Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Rikenellaceae Alistipes TIFETVISVDKVNHK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" KFAIDQEKLEK root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25.1%) GO:0006098 (24.5%) GO:0009052 (0.1%)" "GO:0005829 (24.6%) GO:0016020 (0.1%)" "GO:0004801 (25.1%) GO:0016740 (0.3%) GO:0016744 (0.1%)" "carbohydrate metabolic process (25.1%) pentose-phosphate shunt (24.5%) pentose-phosphate shunt, non-oxidative branch (0.1%)" "cytosol (24.6%) membrane (0.1%)" "transaldolase activity (25.1%) transferase activity (0.3%) transketolase or transaldolase activity (0.1%)" "IPR001585 (25.6%) IPR013785 (25.6%) IPR004730 (24.4%)" "Transaldolase/Fructose-6-phosphate aldolase (25.6%) Aldolase-type TIM barrel (25.6%) Transaldolase type 1 (24.4%)" SPMALMAAGIPCGTEVEVK Collinsella Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella 2.7.11.- (100%) Protein-serine/threonine kinases (100%) GO:0009401 (44.4%) GO:0005737 (44.4%) GO:0016740 (11.1%) phosphoenolpyruvate-dependent sugar phosphotransferase system (44.4%) cytoplasm (44.4%) transferase activity (11.1%) "IPR000032 (33.3%) IPR035895 (33.3%) IPR050399 (33.3%)" "Phosphocarrier protein HPr-like (33.3%) HPr-like superfamily (33.3%) Phosphocarrier protein HPr (33.3%)" YVDGVEMDNQAQYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" YFQDVEDDVKK Pseudomonadati Bacteria Pseudomonadati 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" NAGVQVIGCPK root 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" GANFDKYAGQDIVSNASCTTNCLAPLAK root "1.2.1.- (77.5%) 1.2.1.12 (22.5%)" "With NAD(+) or NADP(+) as acceptor (77.5%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (22.5%)" "GO:0072524 (18.1%) GO:0006006 (17.6%) GO:0006096 (1.4%)" "GO:0005737 (1%) GO:0005576 (0.1%) GO:0005829 (0.1%)" "GO:0051287 (21%) GO:0050661 (17.6%) GO:0004365 (14.3%)" "pyridine-containing compound metabolic process (18.1%) glucose metabolic process (17.6%) glycolytic process (1.4%)" "cytoplasm (1%) extracellular region (0.1%) cytosol (0.1%)" "NAD binding (21%) NADP binding (17.6%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (14.3%)" "IPR020829 (17.3%) IPR020830 (17.3%) IPR020831 (17.3%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.3%) Glyceraldehyde 3-phosphate dehydrogenase, active site (17.3%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.3%)" TGCQEIEAYFLASDYAYRQEPSAEAAVGLGKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (43.5%) IPR019734 (43.5%) IPR013105 (13%)" "Tetratricopeptide-like helical domain superfamily (43.5%) Tetratricopeptide repeat (43.5%) Tetratricopeptide repeat 2 (13%)" YAGTEIELDGEKYLIMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0051085 (0.6%) GO:0005737 (14.1%) "GO:0005524 (17.1%) GO:0044183 (17.1%) GO:0046872 (17.1%)" obsolete chaperone cofactor-dependent protein refolding (0.6%) cytoplasm (14.1%) "ATP binding (17.1%) protein folding chaperone (17.1%) metal ion binding (17.1%)" "IPR011032 (26.1%) IPR020818 (26.1%) IPR037124 (26.1%)" "GroES-like superfamily (26.1%) GroES chaperonin family (26.1%) GroES chaperonin superfamily (26.1%)" FGKNFADLDEEQQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015031 (33.3%) GO:0005886 (33.3%) GO:0022857 (33.3%) protein transport (33.3%) plasma membrane (33.3%) transmembrane transporter activity (33.3%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) VQLSAGHETEHLDK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (14.8%) GO:0030148 (13.9%)" "GO:0016020 (13.9%) GO:0005829 (12.3%) GO:0005737 (1.6%)" "GO:0008890 (14.8%) GO:0030170 (14.8%) GO:0016874 (7.4%)" "L-threonine catabolic process to glycine (14.8%) sphingolipid biosynthetic process (13.9%)" "membrane (13.9%) cytosol (12.3%) cytoplasm (1.6%)" "glycine C-acetyltransferase activity (14.8%) pyridoxal phosphate binding (14.8%) ligase activity (7.4%)" "IPR004839 (16.2%) IPR011282 (16.2%) IPR015421 (16.2%)" "Aminotransferase, class I/classII, large domain (16.2%) 2-amino-3-ketobutyrate coenzyme A ligase (16.2%) Pyridoxal phosphate-dependent transferase, major domain (16.2%)" LHGGEPANFLDVGGGATK root "6.2.1.5 (99.9%) 6.2.1.- (0.1%)" "succinate--CoA ligase (ADP-forming) (99.9%) Acid--thiol ligases (0.1%)" "GO:0006099 (13.6%) GO:0006104 (13.6%) GO:0006086 (0%)" "GO:0042709 (13.6%) GO:0005829 (13.5%) GO:0005739 (0%)" "GO:0004775 (13.6%) GO:0005524 (13.1%) GO:0000287 (12.9%)" "tricarboxylic acid cycle (13.6%) succinyl-CoA metabolic process (13.6%) pyruvate decarboxylation to acetyl-CoA (0%)" "succinate-CoA ligase complex (13.6%) cytosol (13.5%) mitochondrion (0%)" "succinate-CoA ligase (ADP-forming) activity (13.6%) ATP binding (13.1%) magnesium ion binding (12.9%)" "IPR005811 (14.6%) IPR016102 (14.6%) IPR017866 (14.5%)" "ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.6%) Succinyl-CoA synthetase-like (14.6%) Succinyl-CoA synthetase, beta subunit, conserved site (14.5%)" FKGQSPDAFILDLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.21.- (100%) Serine endopeptidases (100%) "GO:0006508 (20%) GO:0007165 (20%)" GO:0030288 (20%) "GO:0004175 (20%) GO:0008236 (20%)" "proteolysis (20%) signal transduction (20%)" outer membrane-bounded periplasmic space (20%) "endopeptidase activity (20%) serine-type peptidase activity (20%)" "IPR005151 (25.4%) IPR029045 (25.4%) IPR036034 (24.6%)" "Tail specific protease (25.4%) ClpP/crotonase-like domain superfamily (25.4%) PDZ superfamily (24.6%)" AQLELSEACGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8.4%) IPR012162 (8.4%) IPR015847 (8.4%)" "Exoribonuclease, phosphorolytic domain 1 (8.4%) Polyribonucleotide nucleotidyltransferase (8.4%) Exoribonuclease, phosphorolytic domain 2 (8.4%)" SIEACLPYYEGVLGLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.1.99.1 (100%) methylmalonyl-CoA epimerase (100%) GO:0046491 (42.9%) "GO:0004493 (42.9%) GO:0051213 (9.5%) GO:0016829 (4.8%)" L-methylmalonyl-CoA metabolic process (42.9%) "methylmalonyl-CoA epimerase activity (42.9%) dioxygenase activity (9.5%) lyase activity (4.8%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" YGNAYADKSEDGDDNPTYSLDGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0043093 (29.8%) GO:0051301 (3.5%)" "GO:0009898 (33.3%) GO:0032153 (33.3%)" "FtsZ-dependent cytokinesis (29.8%) cell division (3.5%)" "cytoplasmic side of plasma membrane (33.3%) cell division site (33.3%)" "IPR003494 (25.3%) IPR043129 (25.3%) IPR050696 (25.3%)" "SHS2 domain inserted in FtsA (25.3%) ATPase, nucleotide binding domain (25.3%) Bacterial cell division protein FtsA/MreB (25.3%)" VRDVIINNGAEMIVVVMGEIMR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.4.3 (100%) formate--tetrahydrofolate ligase (100%) GO:0035999 (33.3%) "GO:0004329 (33.3%) GO:0005524 (33.3%)" tetrahydrofolate interconversion (33.3%) "formate-tetrahydrofolate ligase activity (33.3%) ATP binding (33.3%)" "IPR000559 (33.3%) IPR020628 (33.3%) IPR027417 (33.3%)" "Formate-tetrahydrofolate ligase, FTHFS (33.3%) Formate-tetrahydrofolate ligase, FTHFS, conserved site (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" RLPEEFEILGVGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.49 (100%) glucose-6-phosphate dehydrogenase (NADP(+)) (100%) "GO:0006006 (20%) GO:0009051 (20%)" GO:0005829 (20%) "GO:0004345 (20%) GO:0050661 (20%)" "glucose metabolic process (20%) pentose-phosphate shunt, oxidative branch (20%)" cytosol (20%) "glucose-6-phosphate dehydrogenase activity (20%) NADP binding (20%)" "IPR001282 (20%) IPR019796 (20%) IPR022674 (20%)" "Glucose-6-phosphate dehydrogenase (20%) Glucose-6-phosphate dehydrogenase, active site (20%) Glucose-6-phosphate dehydrogenase, NAD-binding (20%)" VMGLGYPGGPIIDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.234 (100%) N(6)-L-threonylcarbamoyladenine synthase (100%) "GO:0002949 (22.9%) GO:0006508 (3.4%) GO:0008033 (0.3%)" GO:0005737 (22.6%) "GO:0005506 (22.6%) GO:0061711 (16.2%) GO:0016747 (7%)" "tRNA threonylcarbamoyladenosine modification (22.9%) proteolysis (3.4%) tRNA processing (0.3%)" cytoplasm (22.6%) "iron ion binding (22.6%) tRNA N(6)-L-threonylcarbamoyladenine synthase activity (16.2%) acyltransferase activity, transferring groups other than amino-acyl groups (7%)" "IPR000905 (20.4%) IPR017861 (20.4%) IPR022450 (20.1%)" "Gcp-like domain (20.4%) Kae1/TsaD family (20.4%) tRNA N6-adenosine threonylcarbamoyltransferase, TsaD (20.1%)" FGAIAGCMVTEGVVKR root "GO:0006413 (0.1%) GO:0009409 (0.1%) GO:0061077 (0.1%)" "GO:0005829 (20.4%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0003743 (20.9%) GO:0003924 (20.4%) GO:0005525 (20.4%)" "translational initiation (0.1%) response to cold (0.1%) obsolete chaperone-mediated protein folding (0.1%)" "cytosol (20.4%) cytoplasm (0.1%) membrane (0.1%)" "translation initiation factor activity (20.9%) GTPase activity (20.4%) GTP binding (20.4%)" "IPR000178 (7.7%) IPR009000 (7.7%) IPR015760 (7.7%)" "Translation initiation factor IF-2, bacterial-like (7.7%) Translation protein, beta-barrel domain superfamily (7.7%) Translation initiation factor IF- 2 (7.7%)" IKADIEELKSNIATK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" KVGIGHGNLAAMLLR Bacteria Bacteria IPR025964 (100%) GGGtGRT protein (100%) KGVDALANAVK root "5.6.1.7 (99.4%) 4.2.3.5 (0.6%)" "chaperonin ATPase (99.4%) chorismate synthase (0.6%)" "GO:0042026 (18.5%) GO:0009408 (0.4%) GO:0006729 (0.1%)" "GO:0005737 (12.8%) GO:0009986 (0.3%) GO:0042603 (0.3%)" "GO:0005524 (18.5%) GO:0140662 (18.5%) GO:0016853 (17%)" "protein refolding (18.5%) response to heat (0.4%) tetrahydrobiopterin biosynthetic process (0.1%)" "cytoplasm (12.8%) cell surface (0.3%) capsule (0.3%)" "ATP binding (18.5%) ATP-dependent protein folding chaperone (18.5%) isomerase activity (17%)" "IPR001844 (16.6%) IPR002423 (16.6%) IPR027410 (16.6%)" "Chaperonin Cpn60/GroEL (16.6%) Chaperonin Cpn60/GroEL/TCP-1 family (16.6%) TCP-1-like chaperonin intermediate domain superfamily (16.6%)" VLVGCLDDLINWGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "7.1.1.- (94.1%) 1.6.5.11 (5.9%)" "Hydron translocation or charge separation linked to oxidoreductase reactions (94.1%) Transferred entry: 1.6.5.9 (5.9%)" "GO:0009060 (11.1%) GO:0015990 (11.1%)" "GO:0005886 (11.1%) GO:0045271 (11.1%)" "GO:0005506 (11.1%) GO:0008137 (11.1%) GO:0048038 (11.1%)" "aerobic respiration (11.1%) electron transport coupled proton transport (11.1%)" "plasma membrane (11.1%) respiratory chain complex I (11.1%)" "iron ion binding (11.1%) NADH dehydrogenase (ubiquinone) activity (11.1%) quinone binding (11.1%)" "IPR006137 (50%) IPR006138 (50%)" "NADH:ubiquinone oxidoreductase-like, 20kDa subunit (50%) NADH-ubiquinone oxidoreductase, 20 Kd subunit (50%)" SDRLFIFDTTLRDGEQVPGCQLNTVEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.3.3.13 (100%) 2-isopropylmalate synthase (100%) GO:0009098 (20.3%) GO:0005737 (19.7%) "GO:0003852 (20.3%) GO:0003985 (19.7%) GO:0030145 (19.7%)" L-leucine biosynthetic process (20.3%) cytoplasm (19.7%) "2-isopropylmalate synthase activity (20.3%) acetyl-CoA C-acetyltransferase activity (19.7%) manganese ion binding (19.7%)" "IPR000891 (12.6%) IPR002034 (12.6%) IPR013785 (12.6%)" "Pyruvate carboxyltransferase (12.6%) Alpha-isopropylmalate/homocitrate synthase, conserved site (12.6%) Aldolase-type TIM barrel (12.6%)" AVGESVQQPLKYYR root 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.1%) GO:0005829 (33.1%) "GO:0003978 (33.1%) GO:0003974 (0.6%)" galactose metabolic process (33.1%) cytosol (33.1%) "UDP-glucose 4-epimerase activity (33.1%) UDP-N-acetylglucosamine 4-epimerase activity (0.6%)" "IPR005886 (33.3%) IPR036291 (33.3%) IPR016040 (19.5%)" "UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-binding domain (19.5%)" VNDREVVDGTVIAMNKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.8%) "GO:0022627 (24.4%) GO:0005840 (0.9%) GO:1990904 (0.4%)" "GO:0003729 (24.8%) GO:0003735 (24.8%)" translation (24.8%) "cytosolic small ribosomal subunit (24.4%) ribosome (0.9%) ribonucleoprotein complex (0.4%)" "mRNA binding (24.8%) structural constituent of ribosome (24.8%)" "IPR003029 (24.9%) IPR012340 (24.9%) IPR035104 (24.9%)" "S1 domain (24.9%) Nucleic acid-binding, OB-fold (24.9%) Ribosomal protein S1-like (24.9%)" AVQTGGPSGGCLTEK root "1.12.1.3 (48.5%) 1.6.5.11 (33.3%) 1.6.99.5 (9.1%)" "hydrogen dehydrogenase (NADP(+)) (48.5%) Transferred entry: 1.6.5.9 (33.3%) Transferred entry: 1.6.5.11 (9.1%)" "GO:0046872 (24.6%) GO:0051539 (24.6%) GO:0008137 (24%)" "metal ion binding (24.6%) 4 iron, 4 sulfur cluster binding (24.6%) NADH dehydrogenase (ubiquinone) activity (24%)" "IPR019575 (11.6%) IPR037207 (11.6%) IPR037225 (11.6%)" "NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain (11.6%) NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily (11.6%) NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily (11.6%)" VKQETGMYVATEVATAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.5 (100%) chorismate mutase (100%) GO:0046417 (48.9%) "GO:0004106 (48.9%) GO:0003849 (2.2%)" chorismate metabolic process (48.9%) "chorismate mutase activity (48.9%) 3-deoxy-7-phosphoheptulonate synthase activity (2.2%)" "IPR002701 (16.7%) IPR006218 (16.7%) IPR013785 (16.7%)" "Chorismate mutase II, prokaryotic-type (16.7%) DAHP synthetase I/KDSA (16.7%) Aldolase-type TIM barrel (16.7%)" AAPHGTGIYK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (19.4%) GO:0009098 (19.4%) GO:0009099 (19.4%)" "GO:0004084 (20.4%) GO:0052654 (3.9%) GO:0052655 (3.9%)" "isoleucine biosynthetic process (19.4%) L-leucine biosynthetic process (19.4%) L-valine biosynthetic process (19.4%)" "branched-chain-amino-acid transaminase activity (20.4%) L-leucine-2-oxoglutarate transaminase activity (3.9%) L-valine-2-oxoglutarate transaminase activity (3.9%)" "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" YGITDVKEVLHNPSYDVLFAEETKPGLEGFEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17%) GO:0005829 (17%) "GO:0004612 (17%) GO:0005524 (17%) GO:0046872 (17%)" gluconeogenesis (17%) cytosol (17%) "phosphoenolpyruvate carboxykinase (ATP) activity (17%) ATP binding (17%) metal ion binding (17%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" KIEVIDQSMKNE Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR007139 (100%) Protein of unknown function DUF349 (100%) RMEAEAGACEDKKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (50%) GO:0016491 (27.8%) GO:0004601 (18.5%)" "iron ion binding (50%) oxidoreductase activity (27.8%) peroxidase activity (18.5%)" "IPR003251 (12.5%) IPR009040 (12.5%) IPR009078 (12.5%)" "Rubrerythrin, diiron-binding domain (12.5%) Ferritin-like diiron domain (12.5%) Ferritin-like superfamily (12.5%)" RGYDVTVFEALHEIGGVLK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "1.4.1.13 (87.9%) 1.4.1.14 (6.1%) 1.18.1.2 (3%)" "glutamate synthase (NADPH) (87.9%) glutamate synthase (NADH) (6.1%) ferredoxin--NADP(+) reductase (3%)" "GO:0051536 (47.4%) GO:0016491 (30.9%) GO:0004355 (16.5%)" "iron-sulfur cluster binding (47.4%) oxidoreductase activity (30.9%) glutamate synthase (NADPH) activity (16.5%)" "IPR036188 (19.8%) IPR023753 (19.3%) IPR009051 (18.9%)" "FAD/NAD(P)-binding domain superfamily (19.8%) FAD/NAD(P)-binding domain (19.3%) Alpha-helical ferredoxin (18.9%)" SREQFELSSFK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0000049 (16.7%) GO:0003723 (3.3%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) tRNA binding (16.7%) RNA binding (3.3%)" "IPR001848 (25.3%) IPR027486 (25.3%) IPR036838 (25.3%)" "Small ribosomal subunit protein uS10 (25.3%) Small ribosomal subunit protein uS10 domain (25.3%) Small ribosomal subunit protein uS10 domain superfamily (25.3%)" DNIIFDIIEKEHQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (16.4%) GO:0035999 (16.4%) GO:0032259 (7.8%)" GO:0005829 (16.4%) "GO:0004372 (16.4%) GO:0030170 (16.4%) GO:0008168 (7.8%)" "glycine biosynthetic process from serine (16.4%) tetrahydrofolate interconversion (16.4%) methylation (7.8%)" cytosol (16.4%) "glycine hydroxymethyltransferase activity (16.4%) pyridoxal phosphate binding (16.4%) methyltransferase activity (7.8%)" "IPR001085 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Serine hydroxymethyltransferase (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" LDANTLTFEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR015943 (53.8%) IPR031815 (46.2%)" "WD40/YVTN repeat-like-containing domain superfamily (53.8%) Protein of unknown function DUF5074 (46.2%)" ALVPMVIEQTSR Pseudomonadati Bacteria Pseudomonadati 3.4.21.92 (100%) endopeptidase Clp (100%) "GO:0006515 (16.5%) GO:0006508 (0.4%) GO:0009266 (0%)" "GO:0009368 (16.5%) GO:0005737 (16.3%) GO:0005829 (0%)" "GO:0004252 (16.7%) GO:0004176 (16.5%) GO:0051117 (16.5%)" "protein quality control for misfolded or incompletely synthesized proteins (16.5%) proteolysis (0.4%) response to temperature stimulus (0%)" "endopeptidase Clp complex (16.5%) cytoplasm (16.3%) cytosol (0%)" "serine-type endopeptidase activity (16.7%) ATP-dependent peptidase activity (16.5%) ATPase binding (16.5%)" "IPR029045 (20.4%) IPR023562 (20.3%) IPR001907 (20.1%)" "ClpP/crotonase-like domain superfamily (20.4%) Clp protease proteolytic subunit /Translocation-enhancing protein TepA (20.3%) ATP-dependent Clp protease proteolytic subunit (20.1%)" TSADIIGNVNYLYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" NTYAMVGFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.13 (100%) glutamate synthase (NADPH) (100%) "GO:0016740 (92.3%) GO:0004355 (7.7%)" "transferase activity (92.3%) glutamate synthase (NADPH) activity (7.7%)" "IPR029044 (97.1%) IPR005835 (2.9%)" "Nucleotide-diphospho-sugar transferases (97.1%) Nucleotidyl transferase domain (2.9%)" NILFVCGGAFDGIEKK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0051301 (10.1%) GO:0051603 (10.1%)" GO:0009376 (10.1%) "GO:0005524 (10.1%) GO:0008270 (10.1%) GO:0016887 (10.1%)" "cell division (10.1%) proteolysis involved in protein catabolic process (10.1%)" HslUV protease complex (10.1%) "ATP binding (10.1%) zinc ion binding (10.1%) ATP hydrolysis activity (10.1%)" "IPR003593 (10.9%) IPR003959 (10.9%) IPR004487 (10.9%)" "AAA+ ATPase domain (10.9%) ATPase, AAA-type, core (10.9%) Clp protease, ATP-binding subunit ClpX (10.9%)" AALPAIFNPEDLNALEQALR Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) "GO:0009055 (97.2%) GO:0016491 (2.3%) GO:0003677 (0.3%)" "electron transfer activity (97.2%) oxidoreductase activity (2.3%) DNA binding (0.3%)" "IPR014729 (20.8%) IPR012255 (20.6%) IPR014730 (20.6%)" "Rossmann-like alpha/beta/alpha sandwich fold (20.8%) Electron transfer flavoprotein, beta subunit (20.6%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (20.6%)" HGQYIAVNCGAIPEGTIDSELFGHEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006355 (33.4%) GO:0045893 (0.2%)" GO:0032993 (0.2%) "GO:0005524 (33.6%) GO:0043565 (31.7%) GO:0003677 (0.6%)" "regulation of DNA-templated transcription (33.4%) positive regulation of DNA-templated transcription (0.2%)" protein-DNA complex (0.2%) "ATP binding (33.6%) sequence-specific DNA binding (31.7%) DNA binding (0.6%)" "IPR002078 (12.7%) IPR003593 (12.7%) IPR025662 (12.7%)" "RNA polymerase sigma factor 54 interaction domain (12.7%) AAA+ ATPase domain (12.7%) Sigma-54 interaction domain, ATP-binding site 1 (12.7%)" EAHDLGVLDGVTTNPSLMAK Bacteroidota Bacteria Pseudomonadati Bacteroidota "2.2.1.2 (98.3%) 4.1.2.- (1.7%)" "transaldolase (98.3%) Aldehyde-lyases (1.7%)" "GO:0005975 (17.8%) GO:0042182 (17.3%) GO:0006098 (14.7%)" GO:0005737 (17.8%) "GO:0016832 (17.8%) GO:0004801 (14.7%)" "carbohydrate metabolic process (17.8%) ketone catabolic process (17.3%) pentose-phosphate shunt (14.7%)" cytoplasm (17.8%) "aldehyde-lyase activity (17.8%) transaldolase activity (14.7%)" "IPR001585 (17.2%) IPR004731 (17.2%) IPR013785 (17.2%)" "Transaldolase/Fructose-6-phosphate aldolase (17.2%) Transaldolase type 3B/Fructose-6-phosphate aldolase (17.2%) Aldolase-type TIM barrel (17.2%)" TNVPHIFAIGDIVGQPMLAHK root "1.8.1.4 (99.8%) 1.6.1.1 (0.2%) 1.-.-.- (0%)" "dihydrolipoyl dehydrogenase (99.8%) NAD(P)(+) transhydrogenase (Si-specific) (0.2%) Oxidoreductases (0%)" "GO:0006103 (24.1%) GO:0006979 (15.9%) GO:0006090 (0%)" "GO:0005737 (11.2%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0004148 (24.1%) GO:0050660 (24.1%) GO:0016491 (0.2%)" "2-oxoglutarate metabolic process (24.1%) response to oxidative stress (15.9%) pyruvate metabolic process (0%)" "cytoplasm (11.2%) cytosol (0%) plasma membrane (0%)" "dihydrolipoyl dehydrogenase (NADH) activity (24.1%) flavin adenine dinucleotide binding (24.1%) oxidoreductase activity (0.2%)" "IPR023753 (11.4%) IPR036188 (11.4%) IPR050151 (11.4%)" "FAD/NAD(P)-binding domain (11.4%) FAD/NAD(P)-binding domain superfamily (11.4%) Class-I pyridine nucleotide-disulfide oxidoreductase (11.4%)" MKEFPDTQYTVYGYADSATGTPAFNK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (25%) IPR006665 (25%) IPR036737 (25%)" "Outer membrane protein, bacterial (25%) OmpA-like domain (25%) OmpA-like domain superfamily (25%)" DQLFHQFSLYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50%) GO:0046872 (50%)" "alkaline phosphatase activity (50%) metal ion binding (50%)" "IPR001952 (50%) IPR017850 (50%)" "Alkaline phosphatase (50%) Alkaline-phosphatase-like, core domain superfamily (50%)" DIVLLPASAHGTNPASAIQCGYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" AAGLDIKDVMTDIIEDELKNRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.2.4 (100%) D-alanine--D-alanine ligase (100%) "GO:0008360 (14.3%) GO:0009252 (14.3%) GO:0071555 (14.3%)" GO:0005737 (14.3%) "GO:0005524 (14.3%) GO:0008716 (14.3%) GO:0046872 (14.3%)" "regulation of cell shape (14.3%) peptidoglycan biosynthetic process (14.3%) cell wall organization (14.3%)" cytoplasm (14.3%) "ATP binding (14.3%) D-alanine-D-alanine ligase activity (14.3%) metal ion binding (14.3%)" "IPR000291 (14.3%) IPR005905 (14.3%) IPR011095 (14.3%)" "D-alanine--D-alanine ligase/VANA/B/C, conserved site (14.3%) D-alanine--D-alanine ligase (14.3%) D-alanine--D-alanine ligase, C-terminal (14.3%)" YIGSDENWEKAEQAIVEACEEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004829 (16.7%) GO:0005524 (16.7%)" threonyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) threonine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" LGLPLFVKPANQGSSVGVSK root 6.3.2.4 (100%) D-alanine--D-alanine ligase (100%) "GO:0008360 (14.2%) GO:0071555 (14.2%) GO:0009252 (14.2%)" GO:0005829 (14.2%) "GO:0005524 (14.2%) GO:0008716 (14.2%) GO:0046872 (14.2%)" "regulation of cell shape (14.2%) cell wall organization (14.2%) peptidoglycan biosynthetic process (14.2%)" cytosol (14.2%) "ATP binding (14.2%) D-alanine-D-alanine ligase activity (14.2%) metal ion binding (14.2%)" "IPR011095 (14.4%) IPR011761 (14.4%) IPR013815 (14.3%)" "D-alanine--D-alanine ligase, C-terminal (14.4%) ATP-grasp fold (14.4%) ATP-grasp fold, subdomain 1 (14.3%)" VKYEMNIWTPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0046872 (100%) metal ion binding (100%) IPR049279 (100%) DUF3108-like (100%) NDIQIVGINDLCPVDYLAYMLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0006006 (24.7%) "GO:0051287 (25.2%) GO:0050661 (24.7%) GO:0016620 (13.3%)" glucose metabolic process (24.7%) "NAD binding (25.2%) NADP binding (24.7%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (13.3%)" "IPR020828 (16.9%) IPR020831 (16.9%) IPR020830 (16.7%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.9%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (16.9%) Glyceraldehyde 3-phosphate dehydrogenase, active site (16.7%)" IVAAEPASCPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.20 (100%) tryptophan synthase (100%) GO:0005737 (25%) "GO:0004834 (25%) GO:0030170 (25%) GO:0052684 (25%)" cytoplasm (25%) "tryptophan synthase activity (25%) pyridoxal phosphate binding (25%) L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity (25%)" "IPR001926 (20%) IPR006316 (20%) IPR006653 (20%)" "Tryptophan synthase beta chain-like, PALP domain (20%) Tryptophan synthase, beta chain-like (20%) Tryptophan synthase, beta chain, conserved site (20%)" LQSTCQGIMMAELPTER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0009097 (18.3%) GO:0009098 (18.3%) GO:0009099 (18.3%)" "GO:0004084 (15.5%) GO:0052654 (7%) GO:0052655 (7%)" "isoleucine biosynthetic process (18.3%) L-leucine biosynthetic process (18.3%) L-valine biosynthetic process (18.3%)" "branched-chain-amino-acid transaminase activity (15.5%) L-leucine-2-oxoglutarate transaminase activity (7%) L-valine-2-oxoglutarate transaminase activity (7%)" "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" QLLAEVQSICPPGVTIMNVR root "2.7.7.9 (99.9%) 2.7.7.- (0.1%)" "UTP--glucose-1-phosphate uridylyltransferase (99.9%) Nucleotidyltransferases (0.1%)" "GO:0006011 (21.9%) GO:0009103 (18.5%)" GO:0005829 (18.9%) "GO:0003983 (21.9%) GO:0030234 (18.5%) GO:0016779 (0.2%)" "UDP-alpha-D-glucose metabolic process (21.9%) lipopolysaccharide biosynthetic process (18.5%)" cytosol (18.9%) "UTP:glucose-1-phosphate uridylyltransferase activity (21.9%) enzyme regulator activity (18.5%) nucleotidyltransferase activity (0.2%)" "IPR005771 (26%) IPR029044 (26%) IPR005835 (25.9%)" "UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type (26%) Nucleotide-diphospho-sugar transferases (26%) Nucleotidyl transferase domain (25.9%)" TGAYIFDEQMVPNEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR025379 (100%) Protein of unknown function DUF4295 (100%) NAEPADEASAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (18.2%) GO:0006508 (4.5%)" GO:0000428 (18.2%) "GO:0003677 (18.2%) GO:0003899 (18.2%) GO:0032549 (18.2%)" "DNA-templated transcription (18.2%) proteolysis (4.5%)" DNA-directed RNA polymerase complex (18.2%) "DNA binding (18.2%) DNA-directed RNA polymerase activity (18.2%) ribonucleoside binding (18.2%)" "IPR007120 (7.5%) IPR007121 (7.5%) IPR007641 (7.5%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.5%) RNA polymerase, beta subunit, conserved site (7.5%) RNA polymerase Rpb2, domain 7 (7.5%)" EFLAQDDGVIHLLHVLPGSASLSLHR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006950 (14.3%) GO:1902021 (14.3%)" GO:0005737 (14.3%) "GO:0004017 (14.3%) GO:0004672 (14.3%) GO:0042803 (14.3%)" "response to stress (14.3%) regulation of bacterial-type flagellum-dependent cell motility (14.3%)" cytoplasm (14.3%) "AMP kinase activity (14.3%) protein kinase activity (14.3%) protein homodimerization activity (14.3%)" "IPR006016 (34.5%) IPR014729 (34.5%) IPR006015 (31.1%)" "UspA (34.5%) Rossmann-like alpha/beta/alpha sandwich fold (34.5%) Universal stress protein A family (31.1%)" TSHITVVVSDR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (24.8%) GO:0046677 (0.1%) GO:0002181 (0%)" "GO:0022625 (24.5%) GO:0005840 (0.7%) GO:1990904 (0.3%)" "GO:0003735 (24.8%) GO:0019843 (24.8%) GO:0070180 (0%)" "translation (24.8%) response to antibiotic (0.1%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.5%) ribosome (0.7%) ribonucleoprotein complex (0.3%)" "structural constituent of ribosome (24.8%) rRNA binding (24.8%) large ribosomal subunit rRNA binding (0%)" "IPR001063 (20.1%) IPR036394 (20.1%) IPR018260 (20.1%)" "Large ribosomal subunit protein uL22 (20.1%) Ribosomal protein uL22 superfamily (20.1%) Large ribosomal subunit protein uL22, conserved site (20.1%)" IIEVAINELTAITGQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (17.3%) "GO:0005840 (17.3%) GO:1990904 (17.3%)" "GO:0003735 (17.3%) GO:0000049 (15.3%) GO:0019843 (15.3%)" translation (17.3%) "ribosome (17.3%) ribonucleoprotein complex (17.3%)" "structural constituent of ribosome (17.3%) tRNA binding (15.3%) rRNA binding (15.3%)" "IPR002132 (20%) IPR020930 (20%) IPR022803 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5, bacteria (20%) Large ribosomal subunit protein uL5 domain superfamily (20%)" DLPLIASNFR root 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006526 (15.4%) GO:0006207 (15.3%) GO:0006541 (15.3%)" "GO:0005951 (0.2%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0004088 (15.7%) GO:0005524 (15.6%) GO:0004359 (6.3%)" "L-arginine biosynthetic process (15.4%) 'de novo' pyrimidine nucleobase biosynthetic process (15.3%) glutamine metabolic process (15.3%)" "carbamoyl-phosphate synthase complex (0.2%) cytoplasm (0%) membrane (0%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (15.7%) ATP binding (15.6%) glutaminase activity (6.3%)" "IPR002474 (14.6%) IPR036480 (14.6%) IPR029062 (14.3%)" "Carbamoyl-phosphate synthase small subunit, N-terminal domain (14.6%) Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily (14.6%) Class I glutamine amidotransferase-like (14.3%)" VISMYQDPETR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (58%) IPR019734 (40%) IPR036737 (2%)" "Tetratricopeptide-like helical domain superfamily (58%) Tetratricopeptide repeat (40%) OmpA-like domain superfamily (2%)" VLQSQPGERNPAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae IPR020158 (100%) Protein of unknown function DUF2756 (100%) VILVGNLGQDPEVR root "GO:0006260 (21.9%) GO:0006281 (16.9%) GO:0006310 (16.9%)" "GO:0009295 (21.9%) GO:0044777 (0%) GO:0005829 (0%)" "GO:0003697 (22%) GO:0003677 (0.2%) GO:0008047 (0.1%)" "DNA replication (21.9%) DNA repair (16.9%) DNA recombination (16.9%)" "nucleoid (21.9%) single-stranded DNA-binding protein complex (0%) cytosol (0%)" "single-stranded DNA binding (22%) DNA binding (0.2%) enzyme activator activity (0.1%)" "IPR000424 (33.4%) IPR012340 (33.4%) IPR011344 (33.3%)" "Primosome PriB/single-strand DNA-binding (33.4%) Nucleic acid-binding, OB-fold (33.4%) Single-stranded DNA-binding protein (33.3%)" SHHISVYEIVGEQGLLHEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.1.1.31 (100%) 6-phosphogluconolactonase (100%) "GO:0006006 (25.2%) GO:0009051 (23%) GO:0006098 (0.2%)" GO:0005829 (25.2%) "GO:0017057 (25.2%) GO:0016787 (0.9%) GO:0016853 (0.4%)" "glucose metabolic process (25.2%) pentose-phosphate shunt, oxidative branch (23%) pentose-phosphate shunt (0.2%)" cytosol (25.2%) "6-phosphogluconolactonase activity (25.2%) hydrolase activity (0.9%) isomerase activity (0.4%)" "IPR015943 (20.3%) IPR019405 (20.3%) IPR050282 (20.3%)" "WD40/YVTN repeat-like-containing domain superfamily (20.3%) Lactonase, 7-bladed beta-propeller (20.3%) Cycloisomerase 2 (20.3%)" LSHLKELEAESIHIIR Pseudomonadati Bacteria Pseudomonadati 2.7.7.4 (100%) sulfate adenylyltransferase (100%) "GO:0000103 (25.2%) GO:0070814 (24.1%)" "GO:0004781 (25.2%) GO:0005524 (25.2%) GO:0016779 (0.2%)" "sulfate assimilation (25.2%) hydrogen sulfide biosynthetic process (24.1%)" "sulfate adenylyltransferase (ATP) activity (25.2%) ATP binding (25.2%) nucleotidyltransferase activity (0.2%)" "IPR002500 (25%) IPR011784 (25%) IPR014729 (25%)" "Phosphoadenosine phosphosulphate reductase domain (25%) Sulphate adenylyltransferase, small subunit (25%) Rossmann-like alpha/beta/alpha sandwich fold (25%)" AIVDNDGSHNAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0016788 (50%) cytoplasm (50%) hydrolase activity, acting on ester bonds (50%) "IPR004843 (25%) IPR011658 (25%) IPR029052 (25%)" "Calcineurin-like, phosphoesterase domain (25%) PA14 domain (25%) Metallo-dependent phosphatase-like (25%)" SAGGIVLTGSAAAK root "GO:0051085 (2.8%) GO:0006457 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (15.1%) GO:0005829 (0.1%) GO:1990220 (0.1%)" "GO:0005524 (16.4%) GO:0044183 (16.4%) GO:0046872 (16.3%)" "obsolete chaperone cofactor-dependent protein refolding (2.8%) protein folding (0.1%) response to heat (0.1%)" "cytoplasm (15.1%) cytosol (0.1%) GroEL-GroES complex (0.1%)" "ATP binding (16.4%) protein folding chaperone (16.4%) metal ion binding (16.3%)" "IPR011032 (25.3%) IPR020818 (25.3%) IPR037124 (25.3%)" "GroES-like superfamily (25.3%) GroES chaperonin family (25.3%) GroES chaperonin superfamily (25.3%)" MNIIELEGNNIMNILAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.3.1 (100%) citrate (Si)-synthase (100%) "GO:0005975 (24.9%) GO:0006099 (24.9%)" GO:0005829 (24.9%) "GO:0036440 (22.5%) GO:0046912 (2.4%) GO:0016746 (0.3%)" "carbohydrate metabolic process (24.9%) tricarboxylic acid cycle (24.9%)" cytosol (24.9%) "citrate synthase activity (22.5%) acyltransferase activity, acyl groups converted into alkyl on transfer (2.4%) acyltransferase activity (0.3%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" ALQIHGGYGFIKDYPIER Clostridia Bacteria Bacillati Bacillota Clostridia "1.3.8.1 (57.1%) 1.3.99.- (42.9%)" "short-chain acyl-CoA dehydrogenase (57.1%) With other acceptors (42.9%)" "GO:0050660 (50%) GO:0003995 (41.7%) GO:0016937 (8.3%)" "flavin adenine dinucleotide binding (50%) acyl-CoA dehydrogenase activity (41.7%) short-chain fatty acyl-CoA dehydrogenase activity (8.3%)" "IPR006089 (12.5%) IPR006091 (12.5%) IPR009075 (12.5%)" "Acyl-CoA dehydrogenase, conserved site (12.5%) Acyl-CoA oxidase/dehydrogenase, middle domain (12.5%) Acyl-CoA dehydrogenase/oxidase, C-terminal (12.5%)" YFDTNNKMFGYLMEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" MKNISLNIDKVAGFVSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.2%) GO:0006096 (14.2%) GO:0051156 (14.2%)" GO:0005829 (14.2%) "GO:0004347 (14.2%) GO:0048029 (14.2%) GO:0097367 (14.2%)" "gluconeogenesis (14.2%) glycolytic process (14.2%) glucose 6-phosphate metabolic process (14.2%)" cytosol (14.2%) "glucose-6-phosphate isomerase activity (14.2%) monosaccharide binding (14.2%) carbohydrate derivative binding (14.2%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" LGQPSTQLSGGEAQR Bacteria Bacteria 3.1.25.- (100%) Site-specific endodeoxyribonucleases specific for altered bases (100%) "GO:0006289 (11%) GO:0009432 (10.7%) GO:0006281 (0.3%)" "GO:0005737 (11.2%) GO:0009380 (11%)" "GO:0003677 (11.2%) GO:0005524 (11.2%) GO:0016887 (11.2%)" "nucleotide-excision repair (11%) SOS response (10.7%) DNA repair (0.3%)" "cytoplasm (11.2%) excinuclease repair complex (11%)" "DNA binding (11.2%) ATP binding (11.2%) ATP hydrolysis activity (11.2%)" "IPR003439 (13.6%) IPR027417 (13.5%) IPR017871 (13.5%)" "ABC transporter-like, ATP-binding domain (13.6%) P-loop containing nucleoside triphosphate hydrolase (13.5%) ABC transporter-like, conserved site (13.5%)" ANATAPAINVIESDKDYKVEVAAPGMTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR002068 (33.6%) IPR008978 (33.6%) IPR031107 (32.7%)" "Alpha crystallin/Hsp20 domain (33.6%) HSP20-like chaperone (33.6%) Small heat shock protein (32.7%)" AVLVAGGVEAEKLDKLPR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.3%) GO:0006352 (0.1%) GO:0006412 (0.1%)" "GO:0000428 (20%) GO:0005829 (0.2%) GO:0000345 (0.1%)" "GO:0003899 (19.4%) GO:0003677 (19.3%) GO:0032549 (19.3%)" "DNA-templated transcription (19.3%) DNA-templated transcription initiation (0.1%) translation (0.1%)" "DNA-directed RNA polymerase complex (20%) cytosol (0.2%) cytosolic DNA-directed RNA polymerase complex (0.1%)" "DNA-directed RNA polymerase activity (19.4%) DNA binding (19.3%) ribonucleoside binding (19.3%)" "IPR007120 (7.9%) IPR015712 (7.9%) IPR037033 (7.8%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) DNA-directed RNA polymerase, subunit 2 (7.9%) DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily (7.8%)" TLAASGIKDFRK root "1.3.1.9 (99.8%) 1.3.1.10 (0.2%)" "enoyl-[acyl-carrier-protein] reductase (NADH) (99.8%) enoyl-[acyl-carrier-protein] reductase (NADPH, Si-specific) (0.2%)" "GO:0006633 (34.6%) GO:0009102 (29.3%) GO:0030497 (0.2%)" "GO:0005829 (0%) GO:0005886 (0%) GO:0016020 (0%)" "GO:0004318 (34.8%) GO:0016491 (0.3%) GO:0042802 (0.2%)" "fatty acid biosynthetic process (34.6%) biotin biosynthetic process (29.3%) fatty acid elongation (0.2%)" "cytosol (0%) plasma membrane (0%) membrane (0%)" "enoyl-[acyl-carrier-protein] reductase (NADH) activity (34.8%) oxidoreductase activity (0.3%) identical protein binding (0.2%)" "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" AQEQYDEEEAKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (20%) "GO:0048500 (19.2%) GO:0005786 (0.8%)" "GO:0003924 (20%) GO:0005525 (20%) GO:0008312 (20%)" SRP-dependent cotranslational protein targeting to membrane (20%) "signal recognition particle (19.2%) signal recognition particle, endoplasmic reticulum targeting (0.8%)" "GTPase activity (20%) GTP binding (20%) 7S RNA binding (20%)" "IPR000897 (11.2%) IPR004125 (11.2%) IPR022941 (11.2%)" "Signal recognition particle, SRP54 subunit, GTPase domain (11.2%) Signal recognition particle, SRP54 subunit, M-domain (11.2%) Signal recognition particle, SRP54 subunit (11.2%)" AELDGKPVIVCSTGIGGPSTSIAVEELAQLGIR root 2.4.2.3 (100%) uridine phosphorylase (100%) "GO:0009164 (20.6%) GO:0009166 (20.3%) GO:0044206 (16%)" "GO:0005829 (20.8%) GO:0032991 (0.2%)" "GO:0004850 (20.8%) GO:0016757 (0.3%) GO:0005524 (0.2%)" "nucleoside catabolic process (20.6%) nucleotide catabolic process (20.3%) UMP salvage (16%)" "cytosol (20.8%) protein-containing complex (0.2%)" "uridine phosphorylase activity (20.8%) glycosyltransferase activity (0.3%) ATP binding (0.2%)" "IPR000845 (25.1%) IPR018016 (25.1%) IPR035994 (25.1%)" "Nucleoside phosphorylase domain (25.1%) Nucleoside phosphorylase, conserved site (25.1%) Nucleoside phosphorylase superfamily (25.1%)" RIDHINAVLNEYGINGIEDAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR025964 (100%) GGGtGRT protein (100%) TLLTNEDGTYTQR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.-.-.- (33.3%) 1.1.1.131 (33.3%) 1.1.1.57 (33.3%)" "Oxidoreductases (33.3%) mannuronate reductase (33.3%) fructuronate reductase (33.3%)" GO:0005975 (45.7%) "GO:0016616 (42.9%) GO:0050090 (5.7%) GO:0008866 (2.9%)" carbohydrate metabolic process (45.7%) "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (42.9%) mannuronate reductase activity (5.7%) fructuronate reductase activity (2.9%)" "IPR002347 (25.4%) IPR020904 (25.4%) IPR036291 (25.4%)" "Short-chain dehydrogenase/reductase SDR (25.4%) Short-chain dehydrogenase/reductase, conserved site (25.4%) NAD(P)-binding domain superfamily (25.4%)" IMLDNFTPENTKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.2.19 (100%) nicotinate-nucleotide diphosphorylase (carboxylating) (100%) "GO:0009435 (25%) GO:0034213 (25%)" GO:0005737 (25%) GO:0004514 (25%) "NAD+ biosynthetic process (25%) quinolinate catabolic process (25%)" cytoplasm (25%) nicotinate-nucleotide diphosphorylase (carboxylating) activity (25%) "IPR002638 (14.3%) IPR004393 (14.3%) IPR013785 (14.3%)" "Quinolinate phosphoribosyl transferase, C-terminal (14.3%) Nicotinate-nucleotide pyrophosphorylase (14.3%) Aldolase-type TIM barrel (14.3%)" TGLIYGIGHAVYTISDPR Bacteria Bacteria "2.3.3.16 (77.8%) 2.3.3.1 (22.2%)" "citrate synthase (unknown stereospecificity) (77.8%) citrate (Si)-synthase (22.2%)" "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (24.8%) "GO:0036440 (20.3%) GO:0046912 (4.7%) GO:0016746 (0.2%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (24.8%) "citrate synthase activity (20.3%) acyltransferase activity, acyl groups converted into alkyl on transfer (4.7%) acyltransferase activity (0.2%)" "IPR002020 (20.4%) IPR016142 (20.1%) IPR016143 (20.1%)" "Citrate synthase (20.4%) Citrate synthase-like, large alpha subdomain (20.1%) Citrate synthase-like, small alpha subdomain (20.1%)" LVEDFFGKTPSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0042026 (0.8%) GO:0051085 (0.8%)" "GO:0005524 (32%) GO:0051082 (32%) GO:0140662 (32%)" "protein refolding (0.8%) obsolete chaperone cofactor-dependent protein refolding (0.8%)" "ATP binding (32%) unfolded protein binding (32%) ATP-dependent protein folding chaperone (32%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" VLVKPDEAEQK Collinsella aerofaciens Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella aerofaciens GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0044183 (16.7%) GO:0046872 (16.7%)" cytoplasm (16.7%) "ATP binding (16.7%) protein folding chaperone (16.7%) metal ion binding (16.7%)" "IPR011032 (25%) IPR018369 (25%) IPR020818 (25%)" "GroES-like superfamily (25%) Chaperonin GroES, conserved site (25%) GroES chaperonin family (25%)" EGYEQIAAIFTETADQEKEHAK Pseudomonadati Bacteria Pseudomonadati "1.11.1.1 (50%) 1.14.13.81 (50%)" "NADH peroxidase (50%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (50%)" "GO:0005506 (50%) GO:0016491 (49.4%) GO:0048529 (0.6%)" "iron ion binding (50%) oxidoreductase activity (49.4%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity (0.6%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" IAQLFAVAGQTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" CPVYQNVDALPHTDPAEIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0006633 (4.9%) GO:0005829 (4.9%) "GO:0004314 (89%) GO:0016740 (1.2%)" fatty acid biosynthetic process (4.9%) cytosol (4.9%) "[acyl-carrier-protein] S-malonyltransferase activity (89%) transferase activity (1.2%)" "IPR001227 (14.4%) IPR016035 (14.4%) IPR004410 (14.2%)" "Acyl transferase domain superfamily (14.4%) Acyl transferase/acyl hydrolase/lysophospholipase (14.4%) Malonyl CoA-acyl carrier protein transacylase, FabD-type (14.2%)" SNPAVVSEIDGEVTMGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) GO:0000428 (16.9%) "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0000287 (16.2%)" DNA-templated transcription (16.8%) DNA-directed RNA polymerase complex (16.9%) "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) magnesium ion binding (16.2%)" "IPR007081 (9.2%) IPR045867 (9.2%) IPR007083 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.2%) DNA-directed RNA polymerase, subunit beta-prime (9.2%) RNA polymerase Rpb1, domain 4 (9.1%)" AFGTQPTPTGLAEPPIDDLMEHADSK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (25%) GO:0000428 (25%) "GO:0003677 (25%) GO:0003899 (25%)" DNA-templated transcription (25%) DNA-directed RNA polymerase complex (25%) "DNA binding (25%) DNA-directed RNA polymerase activity (25%)" "IPR003716 (33.3%) IPR006110 (33.3%) IPR036161 (33.3%)" "DNA-directed RNA polymerase, omega subunit (33.3%) RNA polymerase, subunit omega/Rpo6/RPB6 (33.3%) RPB6/omega subunit-like superfamily (33.3%)" AGIDKSELSAVAFTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.234 (100%) N(6)-L-threonylcarbamoyladenine synthase (100%) "GO:0002949 (22.8%) GO:0006508 (4.4%)" GO:0005737 (22.8%) "GO:0005506 (21.9%) GO:0061711 (18.4%) GO:0008233 (4.4%)" "tRNA threonylcarbamoyladenosine modification (22.8%) proteolysis (4.4%)" cytoplasm (22.8%) "iron ion binding (21.9%) tRNA N(6)-L-threonylcarbamoyladenine synthase activity (18.4%) peptidase activity (4.4%)" "IPR000905 (20%) IPR017860 (20%) IPR017861 (20%)" "Gcp-like domain (20%) Peptidase M22, conserved site (20%) Kae1/TsaD family (20%)" LITGAMATAIIEGR Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (25%) IPR005706 (25%) IPR018130 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, conserved site (25%)" IEFESVIENVTYKVESDETTGLKEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) TSPAHGTAYDIAGQNVASEESFR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.262 (100%) 4-hydroxythreonine-4-phosphate dehydrogenase (100%) "GO:0046872 (33.3%) GO:0051287 (33.3%) GO:0016491 (21.4%)" "metal ion binding (33.3%) NAD binding (33.3%) oxidoreductase activity (21.4%)" IPR005255 (100%) PdxA family (100%) ALEYGMPPTSGMGIGMDR Bacteria Bacteria 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004824 (16.7%) GO:0005524 (16.7%)" lysyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) lysine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR004364 (12.6%) IPR006195 (12.6%) IPR045864 (12.5%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (12.6%) Aminoacyl-tRNA synthetase, class II (12.6%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (12.5%)" TVMVSDDARDILASK Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.2.1.- (50%) 3.2.1.22 (50%)" "Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (50%) alpha-galactosidase (50%)" "GO:0030246 (61.8%) GO:0016787 (36.4%) GO:0004557 (1.8%)" "carbohydrate binding (61.8%) hydrolase activity (36.4%) alpha-galactosidase activity (1.8%)" "IPR013785 (14%) IPR014718 (14%) IPR017853 (14%)" "Aldolase-type TIM barrel (14%) Glycoside hydrolase-type carbohydrate-binding (14%) Glycoside hydrolase superfamily (14%)" GLLGGHSGMDIIK Bacteria Bacteria "3.4.13.18 (93.3%) 3.4.13.3 (6.7%)" "cytosol non-specific dipeptidase (93.3%) Transferred entry: 3.4.13.18 and 3.4.13.20 (6.7%)" GO:0006508 (25.5%) GO:0005829 (25.5%) "GO:0070573 (25.5%) GO:0046872 (23.6%)" proteolysis (25.5%) cytosol (25.5%) "metallodipeptidase activity (25.5%) metal ion binding (23.6%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" CETDFVAKNEDFVALTQAILDAAVANK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" IKQDWDYLQASNNFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.1 (100%) alpha-amylase (100%) GO:0005975 (50.1%) "GO:0003824 (31.5%) GO:0016787 (13.4%) GO:0004556 (4.2%)" carbohydrate metabolic process (50.1%) "catalytic activity (31.5%) hydrolase activity (13.4%) alpha-amylase activity (4.2%)" "IPR011330 (33.4%) IPR052046 (33.4%) IPR004300 (32.9%)" "Glycoside hydrolase/deacetylase, beta/alpha-barrel (33.4%) Glycosyl hydrolase family 57 (33.4%) Glycoside hydrolase family 57, N-terminal domain (32.9%)" IVGDDVESAVYPIAQALK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0032790 (20%) "GO:0005829 (20%) GO:0016020 (20%)" "GO:0003743 (20%) GO:0043022 (20%)" ribosome disassembly (20%) "cytosol (20%) membrane (20%)" "translation initiation factor activity (20%) ribosome binding (20%)" "IPR001288 (17.3%) IPR019813 (17.3%) IPR019814 (17.3%)" "Translation initiation factor 3 (17.3%) Translation initiation factor 3, conserved site (17.3%) Translation initiation factor 3, N-terminal (17.3%)" ATFDEKENCWR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.99.- (54.5%) 1.3.8.1 (45.5%)" "With other acceptors (54.5%) short-chain acyl-CoA dehydrogenase (45.5%)" "GO:0050660 (50%) GO:0016627 (27.6%) GO:0003995 (19.8%)" "flavin adenine dinucleotide binding (50%) oxidoreductase activity, acting on the CH-CH group of donors (27.6%) acyl-CoA dehydrogenase activity (19.8%)" "IPR006091 (9.7%) IPR009075 (9.7%) IPR013786 (9.7%)" "Acyl-CoA oxidase/dehydrogenase, middle domain (9.7%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.7%) Acyl-CoA dehydrogenase/oxidase, N-terminal (9.7%)" VIFLCSPNNPSGNSLDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.6.1.9 (100%) histidinol-phosphate transaminase (100%) GO:0000105 (33.3%) "GO:0004400 (33.3%) GO:0030170 (33.3%)" L-histidine biosynthetic process (33.3%) "histidinol-phosphate transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR001917 (16.7%) IPR004839 (16.7%) IPR005861 (16.7%)" "Aminotransferase, class-II, pyridoxal-phosphate binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Histidinol-phosphate aminotransferase family (16.7%)" WALDNCADDVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.1%) GO:0005737 (19.7%) "GO:0004816 (20.1%) GO:0005524 (20.1%) GO:0003676 (19.9%)" asparaginyl-tRNA aminoacylation (20.1%) cytoplasm (19.7%) "asparagine-tRNA ligase activity (20.1%) ATP binding (20.1%) nucleic acid binding (19.9%)" "IPR002312 (14.3%) IPR004364 (14.3%) IPR004522 (14.3%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.3%) Aminoacyl-tRNA synthetase, class II (D/K/N) (14.3%) Asparagine-tRNA ligase (14.3%)" ASGNDIVAPYADEFPGSTFVAGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.4.1.2 (66.7%) 1.4.1.4 (33.3%)" "glutamate dehydrogenase (66.7%) glutamate dehydrogenase (NADP(+)) (33.3%)" GO:0006537 (25.6%) GO:0005829 (25.6%) "GO:0004354 (25.6%) GO:0000166 (22.2%) GO:0004352 (1.1%)" glutamate biosynthetic process (25.6%) cytosol (25.6%) "glutamate dehydrogenase (NADP+) activity (25.6%) nucleotide binding (22.2%) glutamate dehydrogenase (NAD+) activity (1.1%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" IEVEGGDLDQYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.8%) GO:0006516 (19.8%)" GO:0005829 (19.8%) "GO:0000224 (19.8%) GO:0030246 (19.8%) GO:0016798 (1.2%)" "carbohydrate metabolic process (19.8%) glycoprotein catabolic process (19.8%)" cytosol (19.8%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.8%) carbohydrate binding (19.8%) hydrolase activity, acting on glycosyl bonds (1.2%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" KDEAGNLLMSKPATPGMEDRPVVVLQSHMDMVCEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" GQTGQQLLLGAYSALSR Bacteria Bacteria "1.3.5.1 (98.6%) 1.3.5.4 (1.2%) 1.-.-.- (0.2%)" "succinate dehydrogenase (98.6%) Transferred entry: 1.3.5.1 (1.2%) Oxidoreductases (0.2%)" GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (14.9%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (14.9%)" "IPR003953 (14.4%) IPR030664 (14.4%) IPR036188 (14.4%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.4%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (14.4%) FAD/NAD(P)-binding domain superfamily (14.4%)" ALVNEPPVIFADEPTGNLDEENEQR root 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0005886 (20.2%) GO:1902495 (18.5%)" "GO:0005524 (20.5%) GO:0016887 (20.2%) GO:0022857 (20.2%)" "plasma membrane (20.2%) transmembrane transporter complex (18.5%)" "ATP binding (20.5%) ATP hydrolysis activity (20.2%) transmembrane transporter activity (20.2%)" "IPR003439 (17.1%) IPR015854 (17.1%) IPR027417 (17.1%)" "ABC transporter-like, ATP-binding domain (17.1%) ABC transporter, lipoprotein release, LolD-like (17.1%) P-loop containing nucleoside triphosphate hydrolase (17.1%)" YFEEISQIPR Bacteria Bacteria "3.4.13.18 (96.8%) 3.4.13.- (1.6%) 3.4.13.3 (1.6%)" "cytosol non-specific dipeptidase (96.8%) Dipeptidases (1.6%) Transferred entry: 3.4.13.18 and 3.4.13.20 (1.6%)" GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.5%) IPR002933 (33.5%) IPR011650 (31.8%)" "Peptidase M20C, Xaa-His dipeptidase (33.5%) Peptidase M20 (33.5%) Peptidase M20, dimerisation domain (31.8%)" DPEHGGMTWTSQYADSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0044718 (2.4%) GO:0009279 (92.9%) "GO:0004180 (2.4%) GO:0015344 (2.4%)" siderophore transmembrane transport (2.4%) cell outer membrane (92.9%) "carboxypeptidase activity (2.4%) siderophore uptake transmembrane transporter activity (2.4%)" "IPR039426 (14.9%) IPR012910 (14.6%) IPR023996 (14.6%)" "TonB-dependent receptor-like (14.9%) TonB-dependent receptor, plug domain (14.6%) TonB-dependent outer membrane protein, SusC/RagA (14.6%)" NAFVQVFESTR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (22.4%) GO:0046034 (2.6%)" "GO:0005524 (25%) GO:0046961 (25%) GO:0046933 (22.4%)" "proton motive force-driven plasma membrane ATP synthesis (22.4%) ATP metabolic process (2.6%)" "ATP binding (25%) proton-transporting ATPase activity, rotational mechanism (25%) proton-transporting ATP synthase activity, rotational mechanism (22.4%)" "IPR000194 (14.4%) IPR004100 (14.4%) IPR022878 (14.4%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14.4%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (14.4%) V-type ATP synthase catalytic alpha chain (14.4%)" LSFMGLPCPNIFAGGLNFHGR Bacteria Bacteria 3.4.11.4 (100%) tripeptide aminopeptidase (100%) "GO:0006508 (16.7%) GO:0043171 (16%) GO:0006518 (0.7%)" "GO:0005829 (16%) GO:0005737 (0.7%)" "GO:0008237 (16.7%) GO:0008270 (16.7%) GO:0045148 (16.7%)" "proteolysis (16.7%) peptide catabolic process (16%) peptide metabolic process (0.7%)" "cytosol (16%) cytoplasm (0.7%)" "metallopeptidase activity (16.7%) zinc ion binding (16.7%) tripeptide aminopeptidase activity (16.7%)" "IPR001261 (20%) IPR002933 (20%) IPR010161 (20%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%) Peptidase M20 (20%) Peptidase M20B, tripeptide aminopeptidase (20%)" FITAEEAASYVHHNDNVGFSGFTPAGCPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (25%) GO:0006084 (25%)" "GO:0003986 (25%) GO:0008775 (25%)" "acetate metabolic process (25%) acetyl-CoA metabolic process (25%)" "acetyl-CoA hydrolase activity (25%) acetate CoA-transferase activity (25%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" YKDPNYSAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0003700 (50%) GO:0043565 (50%)" "DNA-binding transcription factor activity (50%) sequence-specific DNA binding (50%)" "IPR018060 (51%) IPR009057 (49%)" "AraC-like, DNA binding HTH domain (51%) Homedomain-like superfamily (49%)" IQLNDKFAEVSEVQDYIYQER Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0015031 (31.3%) GO:0005886 (34.4%) GO:0022857 (34.4%) protein transport (31.3%) plasma membrane (34.4%) transmembrane transporter activity (34.4%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) VLGDKIQLVGDDLFVTNTK root "4.2.1.11 (99.8%) 6.3.4.2 (0.2%)" "phosphopyruvate hydratase (99.8%) CTP synthase (glutamine hydrolyzing) (0.2%)" "GO:0006096 (16.7%) GO:0019856 (0%) GO:0044210 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" "glycolytic process (16.7%) pyrimidine nucleobase biosynthetic process (0%) 'de novo' CTP biosynthetic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020810 (16.8%) IPR036849 (16.8%)" "Enolase (16.8%) Enolase, C-terminal TIM barrel domain (16.8%) Enolase-like, C-terminal domain superfamily (16.8%)" TKLLYVAPESLTKEENVEFLR Bacteroidota Bacteria Pseudomonadati Bacteroidota "5.6.2.4 (79.7%) 3.6.4.12 (19.2%) 3.6.1.- (1.1%)" "DNA 3'-5' helicase (79.7%) DNA helicase (19.2%) In phosphorus-containing anhydrides (1.1%)" "GO:0006281 (8.7%) GO:0006310 (8.7%) GO:0006260 (8.3%)" "GO:0005737 (8.7%) GO:0030894 (8.7%) GO:0043590 (8.7%)" "GO:0005524 (8.7%) GO:0009378 (8.7%) GO:0043138 (8.7%)" "DNA repair (8.7%) DNA recombination (8.7%) DNA replication (8.3%)" "cytoplasm (8.7%) replisome (8.7%) bacterial nucleoid (8.7%)" "ATP binding (8.7%) four-way junction helicase activity (8.7%) 3'-5' DNA helicase activity (8.7%)" "IPR011545 (7.6%) IPR014001 (7.6%) IPR027417 (7.6%)" "DEAD/DEAH-box helicase domain (7.6%) Helicase superfamily 1/2, ATP-binding domain (7.6%) P-loop containing nucleoside triphosphate hydrolase (7.6%)" FAILDPQVTYSLPER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (25%) IPR018211 (25%) IPR044731 (25%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (25%) Alcohol dehydrogenase, iron-type, conserved site (25%) Butanol dehydrogenase-like (25%)" HKLLDIIGDLALIGKPIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.5.1.108 (53.3%) 4.2.1.59 (46.7%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase (53.3%) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (46.7%)" "GO:0009245 (14.6%) GO:0006633 (13%)" "GO:0005737 (14.6%) GO:0016020 (14.6%)" "GO:0103117 (14.6%) GO:0046872 (14%) GO:0019171 (10.3%)" "lipid A biosynthetic process (14.6%) fatty acid biosynthetic process (13%)" "cytoplasm (14.6%) membrane (14.6%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.6%) metal ion binding (14%) (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (10.3%)" "IPR004463 (14.6%) IPR011334 (14.6%) IPR013114 (14.6%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.6%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.6%) Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ (14.6%)" AQFSEEELEEKGALIDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (7.7%) IPR003029 (7.7%) IPR004087 (7.7%)" "Exoribonuclease, phosphorolytic domain 1 (7.7%) S1 domain (7.7%) K Homology domain (7.7%)" MFGYPGIDLQDKCWILLAK Bacteria Bacteria "2.7.1.- (71.4%) 2.7.1.4 (19%) 2.7.1.11 (4.8%)" "Phosphotransferases with an alcohol group as acceptor (71.4%) fructokinase (19%) 6-phosphofructokinase (4.8%)" "GO:0016301 (95.1%) GO:0008865 (2.9%) GO:0003872 (1%)" "kinase activity (95.1%) fructokinase activity (2.9%) 6-phosphofructokinase activity (1%)" "IPR002173 (25.1%) IPR011611 (25.1%) IPR050306 (25.1%)" "Carbohydrate/purine kinase, PfkB, conserved site (25.1%) Carbohydrate kinase PfkB (25.1%) PfkB Carbohydrate Kinase (25.1%)" FTDMHQWICDLEDFDDDPQASNEK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales GO:0016226 (33.1%) GO:0005829 (33.1%) "GO:0008198 (33.1%) GO:0004857 (0.4%) GO:0005506 (0.4%)" iron-sulfur cluster assembly (33.1%) cytosol (33.1%) "ferrous iron binding (33.1%) enzyme inhibitor activity (0.4%) iron ion binding (0.4%)" "IPR007479 (50%) IPR036762 (50%)" "ISC system FeS cluster assembly, IscX (50%) IscX-like superfamily (50%)" GYTIQPYSPAAGTGLSTHELNQPGCYR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.4%) GO:0005737 (14.3%) "GO:0004822 (14.4%) GO:0005524 (14.4%) GO:0002161 (14.3%)" isoleucyl-tRNA aminoacylation (14.4%) cytoplasm (14.3%) "isoleucine-tRNA ligase activity (14.4%) ATP binding (14.4%) aminoacyl-tRNA deacylase activity (14.3%)" "IPR002300 (12.6%) IPR002301 (12.6%) IPR023586 (12.6%)" "Aminoacyl-tRNA synthetase, class Ia (12.6%) Isoleucine-tRNA ligase (12.6%) Isoleucine-tRNA ligase, type 2 (12.6%)" YVNEAQSINLTPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" ERIAQLLDEGSFEELDMFVQHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.-.-.- (100%) Ligases (100%) GO:0015977 (21.1%) GO:0009317 (21.1%) "GO:0004658 (23.3%) GO:0003989 (21.1%) GO:0016740 (11.1%)" carbon fixation (21.1%) acetyl-CoA carboxylase complex (21.1%) "propionyl-CoA carboxylase activity (23.3%) acetyl-CoA carboxylase activity (21.1%) transferase activity (11.1%)" "IPR011762 (20.2%) IPR029045 (20.2%) IPR034733 (20.2%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20.2%) ClpP/crotonase-like domain superfamily (20.2%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.2%)" EVETDPADIALK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" VKLQGDDLVVNFSQTKPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005829 (100%) cytosol (100%) "IPR004375 (50%) IPR037012 (50%)" "NanQ anomerase/TabA/YiaL family (50%) NanQ anomerase/TabA/YiaL superfamily (50%)" LIMNYNTIGGVQADLHPNFIPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 7.1.1.- (100%) Hydron translocation or charge separation linked to oxidoreductase reactions (100%) "GO:0005886 (14.5%) GO:0030964 (14.5%) GO:0005737 (13%)" "GO:0008137 (14.5%) GO:0048038 (14.5%) GO:0050136 (14.5%)" "plasma membrane (14.5%) NADH dehydrogenase complex (14.5%) cytoplasm (13%)" "NADH dehydrogenase (ubiquinone) activity (14.5%) quinone binding (14.5%) NADH dehydrogenase (quinone) (non-electrogenic) activity (14.5%)" "IPR001135 (14.3%) IPR001268 (14.3%) IPR020396 (14.3%)" "NADH-quinone oxidoreductase, subunit D (14.3%) NADH:ubiquinone oxidoreductase, 30kDa subunit (14.3%) NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site (14.3%)" ATTVPLVGESLWK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "6.3.4.14 (75%) 6.4.1.7 (25%)" "biotin carboxylase (75%) 2-oxoglutarate carboxylase (25%)" GO:2001295 (18%) "GO:0005524 (22%) GO:0046872 (22%) GO:0003989 (16%)" malonyl-CoA biosynthetic process (18%) "ATP binding (22%) metal ion binding (22%) acetyl-CoA carboxylase activity (16%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" HQSQMESAPFLGNDER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0006044 (32.3%) GO:0005975 (32.2%)" "GO:0004342 (32.6%) GO:0016853 (2.3%) GO:0016787 (0.7%)" "N-acetylglucosamine metabolic process (32.3%) carbohydrate metabolic process (32.2%)" "glucosamine-6-phosphate deaminase activity (32.6%) isomerase activity (2.3%) hydrolase activity (0.7%)" "IPR052960 (16.5%) IPR024078 (16.3%) IPR003737 (15.8%)" "Glucosamine-6-phosphate deaminase-like (16.5%) Putative deacetylase LmbE-like domain superfamily (16.3%) N-acetylglucosaminyl phosphatidylinositol deacetylase-related (15.8%)" METHPQFTPDYIYAGR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.17.7.3 (100%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (100%) "GO:0016114 (17.4%) GO:0019288 (17.4%)" "GO:0005506 (17.4%) GO:0046429 (17.4%) GO:0051539 (17.4%)" "terpenoid biosynthetic process (17.4%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.4%)" "iron ion binding (17.4%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.4%) 4 iron, 4 sulfur cluster binding (17.4%)" "IPR004588 (25%) IPR011005 (25%) IPR017178 (25%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25%) Dihydropteroate synthase-like superfamily (25%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (25%)" GGRGEAEEGYTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.6.4.13 (100%) RNA helicase (100%) "GO:0009266 (2.9%) GO:0042255 (2.9%)" GO:0005829 (18.8%) "GO:0003676 (18.8%) GO:0003724 (18.8%) GO:0005524 (18.8%)" "response to temperature stimulus (2.9%) ribosome assembly (2.9%)" cytosol (18.8%) "nucleic acid binding (18.8%) RNA helicase activity (18.8%) ATP binding (18.8%)" "IPR000629 (10.9%) IPR001650 (10.9%) IPR005580 (10.9%)" "ATP-dependent RNA helicase DEAD-box, conserved site (10.9%) Helicase, C-terminal domain-like (10.9%) DEAD box helicase DbpA/CsdA, RNA-binding domain (10.9%)" YVENPEGNMEKENIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (13.4%) GO:0006526 (13.4%) GO:0006541 (13.4%)" GO:0005737 (13.4%) "GO:0004088 (13.4%) GO:0005524 (13.4%) GO:0046872 (13.4%)" "pyrimidine nucleotide biosynthetic process (13.4%) L-arginine biosynthetic process (13.4%) glutamine metabolic process (13.4%)" cytoplasm (13.4%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.4%) ATP binding (13.4%) metal ion binding (13.4%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" VAEAYLTFAEADAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (45.9%) IPR012944 (45.9%) IPR033985 (8.1%)" "Tetratricopeptide-like helical domain superfamily (45.9%) RagB/SusD domain (45.9%) SusD-like, N-terminal (8.1%)" FKTASTAVNRR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR007139 (100%) Protein of unknown function DUF349 (100%) EAAATGAKPAELEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0006508 (20%) GO:0009636 (20%) GO:0043418 (20%)" GO:0005737 (20%) GO:0070005 (20%) "proteolysis (20%) response to toxic substance (20%) homocysteine catabolic process (20%)" cytoplasm (20%) cysteine-type aminopeptidase activity (20%) "IPR000169 (33.3%) IPR004134 (33.3%) IPR038765 (33.3%)" "Cysteine peptidase, cysteine active site (33.3%) Peptidase C1B, bleomycin hydrolase (33.3%) Papain-like cysteine peptidase superfamily (33.3%)" NLEFGTGGLRGIMGAGTNRMNIYTVGAATQGLSNYLK EQGLHFYAAGHHATER root 3.5.4.16 (100%) GTP cyclohydrolase I (100%) "GO:0006281 (24.4%) GO:0005975 (0%) GO:0010212 (0%)" "GO:0005737 (30.8%) GO:0005829 (0%) GO:0060187 (0%)" "GO:0046872 (30.8%) GO:0016787 (13.5%) GO:0003934 (0.2%)" "DNA repair (24.4%) carbohydrate metabolic process (0%) response to ionizing radiation (0%)" "cytoplasm (30.8%) cytosol (0%) cell pole (0%)" "metal ion binding (30.8%) hydrolase activity (13.5%) GTP cyclohydrolase I activity (0.2%)" "IPR002678 (49.7%) IPR036069 (49.7%) IPR003778 (0.1%)" "DUF34/NIF3 (49.7%) DUF34/NIF3 superfamily (49.7%) Carboxyltransferase domain, subdomain A and B (0.1%)" NAVFTLESYR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.7 (100%) DNA-directed DNA polymerase (100%) GO:0006271 (16.6%) "GO:0005737 (16.6%) GO:0009360 (16.6%)" "GO:0003677 (16.6%) GO:0003887 (16.6%) GO:0008408 (16.6%)" DNA strand elongation involved in DNA replication (16.6%) "cytoplasm (16.6%) DNA polymerase III complex (16.6%)" "DNA binding (16.6%) DNA-directed DNA polymerase activity (16.6%) 3'-5' exonuclease activity (16.6%)" "IPR001001 (20%) IPR022634 (20%) IPR022635 (20%)" "DNA polymerase III, beta sliding clamp (20%) DNA polymerase III, beta sliding clamp, N-terminal (20%) DNA polymerase III, beta sliding clamp, C-terminal (20%)" LEFPDALLKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.4%) GO:0051083 (16.4%)" "GO:0003755 (16.4%) GO:0043022 (16.4%) GO:0044183 (16.4%)" "protein transport (16.7%) protein unfolding (16.4%) 'de novo' cotranslational protein folding (16.4%)" "peptidyl-prolyl cis-trans isomerase activity (16.4%) ribosome binding (16.4%) protein folding chaperone (16.4%)" "IPR027304 (20.1%) IPR037041 (20.1%) IPR008881 (20%)" "Trigger factor/SurA domain superfamily (20.1%) Trigger factor, C-terminal domain superfamily (20.1%) Trigger factor, ribosome-binding, bacterial (20%)" VKDDLQELAVVESFPTKIEGR root 6.1.1.3 (100%) threonine--tRNA ligase (100%) "GO:0032790 (19.8%) GO:0001731 (0.1%) GO:0006413 (0.1%)" "GO:0005829 (19.8%) GO:0016020 (19.7%) GO:0005840 (0.1%)" "GO:0003743 (20.2%) GO:0043022 (19.7%) GO:0000049 (0.1%)" "ribosome disassembly (19.8%) formation of translation preinitiation complex (0.1%) translational initiation (0.1%)" "cytosol (19.8%) membrane (19.7%) ribosome (0.1%)" "translation initiation factor activity (20.2%) ribosome binding (19.7%) tRNA binding (0.1%)" "IPR019815 (17.1%) IPR036788 (17.1%) IPR001288 (17.1%)" "Translation initiation factor 3, C-terminal (17.1%) Translation initiation factor 3 (IF-3), C-terminal domain superfamily (17.1%) Translation initiation factor 3 (17.1%)" MVSNSWAHADENTSVYELK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0009328 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) phenylalanine-tRNA ligase complex (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002547 (7.7%) IPR004532 (7.7%) IPR005121 (7.7%)" "tRNA-binding domain (7.7%) Phenylalanine-tRNA ligase, class IIc, beta subunit, bacterial type (7.7%) Ferrodoxin-fold anticodon-binding domain (7.7%)" VVGAAVGAAVGYLAATDKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR024623 (100%) Uncharacterised protein family YtxH (100%) LLNDTLPLSIGGGIGQSR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.1.1 (100%) aspartate--ammonia ligase (100%) "GO:0070981 (22.4%) GO:0006529 (2.6%)" GO:0005829 (25%) "GO:0004071 (25%) GO:0005524 (22.4%) GO:0000166 (2.6%)" "L-asparagine biosynthetic process (22.4%) obsolete asparagine biosynthetic process (2.6%)" cytosol (25%) "aspartate-ammonia ligase activity (25%) ATP binding (22.4%) nucleotide binding (2.6%)" "IPR004618 (33.3%) IPR006195 (33.3%) IPR045864 (33.3%)" "Aspartate--ammonia ligase (33.3%) Aminoacyl-tRNA synthetase, class II (33.3%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (33.3%)" KGDTVYVNSGESR AEIEGDMGDNKVGLQAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006281 (13.4%) GO:0006310 (13.4%) GO:0009432 (10%)" "GO:0005829 (13.3%) GO:0005737 (0.1%)" "GO:0003697 (13.4%) GO:0005524 (13.4%) GO:0140664 (13.4%)" "DNA repair (13.4%) DNA recombination (13.4%) SOS response (10%)" "cytosol (13.3%) cytoplasm (0.1%)" "single-stranded DNA binding (13.4%) ATP binding (13.4%) ATP-dependent DNA damage sensor activity (13.4%)" "IPR013765 (12%) IPR020588 (12%) IPR027417 (12%)" "DNA recombination and repair protein RecA (12%) DNA recombination and repair protein RecA-like, ATP-binding domain (12%) P-loop containing nucleoside triphosphate hydrolase (12%)" NVILLDDMIDTAGTIVNAANALK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (16.7%) IPR000842 (16.7%) IPR005946 (16.7%)" "Phosphoribosyltransferase domain (16.7%) Phosphoribosyl pyrophosphate synthetase, conserved site (16.7%) Ribose-phosphate pyrophosphokinase (16.7%)" LEQQALMKESDEASK root "GO:0034605 (17%) GO:0042026 (16%) GO:0006508 (0.1%)" "GO:0005829 (15.5%) GO:0005737 (1.5%) GO:0016020 (0%)" "GO:0005524 (17%) GO:0016887 (17%) GO:0042802 (15.5%)" "cellular response to heat (17%) protein refolding (16%) proteolysis (0.1%)" "cytosol (15.5%) cytoplasm (1.5%) membrane (0%)" "ATP binding (17%) ATP hydrolysis activity (17%) identical protein binding (15.5%)" "IPR027417 (8.6%) IPR041546 (8.5%) IPR050130 (8.5%)" "P-loop containing nucleoside triphosphate hydrolase (8.6%) ClpA/ClpB, AAA lid domain (8.5%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.5%)" GVKLDNELEVEDLKELVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25.1%) GO:0016301 (25.1%) GO:0050242 (25.1%)" "ATP binding (25.1%) kinase activity (25.1%) pyruvate, phosphate dikinase activity (25.1%)" "IPR002192 (10.2%) IPR010121 (10.2%) IPR013815 (10.1%)" "Pyruvate phosphate dikinase, AMP/ATP-binding (10.2%) Pyruvate, phosphate dikinase (10.2%) ATP-grasp fold, subdomain 1 (10.1%)" VDKSGIVHTSVGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (16.7%) GO:0006417 (16.7%)" GO:0015934 (16.7%) "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" "translation (16.7%) regulation of translation (16.7%)" large ribosomal subunit (16.7%) "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR002143 (16.7%) IPR005878 (16.7%) IPR016095 (16.7%)" "Large ribosomal subunit protein uL1 (16.7%) Large ribosomal subunit protein uL1, bacteria (16.7%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" ELGMPEHLITR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0006177 (0.2%) GO:0005829 (33.1%) "GO:0003921 (33.1%) GO:0005524 (33.1%) GO:0016740 (0.2%)" GMP biosynthetic process (0.2%) cytosol (33.1%) "GMP synthase activity (33.1%) ATP binding (33.1%) transferase activity (0.2%)" "IPR001674 (12.6%) IPR014729 (12.6%) IPR025777 (12.6%)" "GMP synthase, C-terminal (12.6%) Rossmann-like alpha/beta/alpha sandwich fold (12.6%) GMP synthetase ATP pyrophosphatase domain (12.6%)" LYDFEKEGIQVVPSAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "6.3.1.21 (92%) 2.1.2.- (8%)" "phosphoribosylglycinamide formyltransferase 2 (92%) Hydroxymethyl-, formyl- and related transferases (8%)" "GO:0006189 (16.2%) GO:0006164 (0.5%)" GO:0005829 (16.6%) "GO:0005524 (16.6%) GO:0000287 (16.2%) GO:0004644 (16.2%)" "'de novo' IMP biosynthetic process (16.2%) purine nucleotide biosynthetic process (0.5%)" cytosol (16.6%) "ATP binding (16.6%) magnesium ion binding (16.2%) phosphoribosylglycinamide formyltransferase activity (16.2%)" "IPR016185 (12.7%) IPR054350 (12.7%) IPR003135 (12.6%)" "Pre-ATP-grasp domain superfamily (12.7%) PurT/PurK-like, preATP-grasp domain (12.7%) ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.6%)" ILLSSLEGFAITTIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.7%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0046983 (16.7%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.7%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%)" "IPR011260 (16.7%) IPR011262 (16.7%) IPR011263 (16.7%)" "RNA polymerase, alpha subunit, C-terminal (16.7%) DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%)" TLASYADCYINDAFGTAHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%)" GO:0005829 (16.5%) "GO:0004618 (16.5%) GO:0005524 (16.5%) GO:0043531 (16.5%)" "gluconeogenesis (16.5%) glycolytic process (16.5%)" cytosol (16.5%) "phosphoglycerate kinase activity (16.5%) ATP binding (16.5%) ADP binding (16.5%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" IDAEQYSADIKK ELHTELAKDAIDYTLYPDYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (17%) IPR014628 (17%) IPR014710 (17%)" "RmlC-like cupin domain superfamily (17%) Mannose-6-phosphate isomerase, Firmicutes type, short form (17%) RmlC-like jelly roll fold (17%)" NEKRMLQEAVDSLFDNSRK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) "GO:0000428 (16.9%) GO:0031981 (0%)" "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (15.7%)" DNA-templated transcription (16.9%) "DNA-directed RNA polymerase complex (16.9%) nuclear lumen (0%)" "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (15.7%)" "IPR007080 (9.1%) IPR045867 (9.1%) IPR006592 (9.1%)" "RNA polymerase Rpb1, domain 1 (9.1%) DNA-directed RNA polymerase, subunit beta-prime (9.1%) RNA polymerase, N-terminal (9.1%)" NTTGVLLLTNDGDLASK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.99.- (98.6%) 5.4.99.22 (1.4%)" "Transferring other groups (98.6%) 23S rRNA pseudouridine(2605) synthase (1.4%)" "GO:0000455 (31.6%) GO:0001522 (1.2%) GO:0006364 (1.2%)" "GO:0003723 (32.8%) GO:0120159 (31.6%) GO:0009982 (0.9%)" "enzyme-directed rRNA pseudouridine synthesis (31.6%) pseudouridine synthesis (1.2%) rRNA processing (1.2%)" "RNA binding (32.8%) rRNA pseudouridine synthase activity (31.6%) pseudouridine synthase activity (0.9%)" "IPR006145 (11.2%) IPR018496 (11.2%) IPR050343 (11.2%)" "Pseudouridine synthase, RsuA/RluA-like (11.2%) Pseudouridine synthase, RsuA/RluB/E/F, conserved site (11.2%) Ribosomal RNA Pseudouridine Synthase RsuA (11.2%)" ALVLSADKNSAYYNETDPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) "GO:0006633 (30%) GO:0044550 (30%)" "GO:0004315 (30%) GO:0033818 (10%)" "fatty acid biosynthetic process (30%) secondary metabolite biosynthetic process (30%)" "3-oxoacyl-[acyl-carrier-protein] synthase activity (30%) beta-ketoacyl-acyl-carrier-protein synthase III activity (10%)" "IPR013747 (33.3%) IPR013751 (33.3%) IPR016039 (33.3%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (33.3%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (33.3%) Thiolase-like (33.3%)" LGIWVAGNRVENNWAHPDEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0009328 (16.7%) "GO:0000049 (16.7%) GO:0000287 (16.7%) GO:0004826 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) phenylalanine-tRNA ligase complex (16.7%) "tRNA binding (16.7%) magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%)" "IPR002547 (7.7%) IPR004532 (7.7%) IPR005121 (7.7%)" "tRNA-binding domain (7.7%) Phenylalanine-tRNA ligase, class IIc, beta subunit, bacterial type (7.7%) Ferrodoxin-fold anticodon-binding domain (7.7%)" SLRDDTWVTLR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0044011 (1%) GO:0070301 (1%) GO:0071276 (1%)" "GO:0042597 (94%) GO:0030288 (1%)" "GO:0003700 (1%) GO:0043565 (1%)" "single-species biofilm formation on inanimate substrate (1%) cellular response to hydrogen peroxide (1%) cellular response to cadmium ion (1%)" "periplasmic space (94%) outer membrane-bounded periplasmic space (1%)" "DNA-binding transcription factor activity (1%) sequence-specific DNA binding (1%)" "IPR005220 (25%) IPR036700 (25%) IPR052401 (25%)" "Calcium-regulated OB-fold protein CarO-like (25%) Bacterial OB-fold superfamily (25%) Unknown (25%)" VMDLTATTMCK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.4.22 (100%) UMP kinase (100%) "GO:0006225 (20%) GO:0044210 (19.8%)" "GO:0005737 (19.8%) GO:0016020 (0.2%)" "GO:0005524 (20%) GO:0033862 (20%)" "UDP biosynthetic process (20%) 'de novo' CTP biosynthetic process (19.8%)" "cytoplasm (19.8%) membrane (0.2%)" "ATP binding (20%) UMP kinase activity (20%)" "IPR001048 (25%) IPR036393 (24.9%) IPR015963 (24.7%)" "Aspartate/glutamate/uridylate kinase (25%) Acetylglutamate kinase-like superfamily (24.9%) Uridylate kinase, bacteria (24.7%)" FRGALSTASIDDFTR root GO:0016032 (50%) GO:0016020 (50%) viral process (50%) membrane (50%) IPR019276 (100%) Protein of unkown function DUF2303 (100%) EWVIVDAEGQTLGR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006412 (20%) GO:0017148 (20%)" GO:0022625 (20%) "GO:0003729 (20%) GO:0003735 (20%)" "translation (20%) negative regulation of translation (20%)" cytosolic large ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%)" "IPR005822 (26.4%) IPR005823 (26.4%) IPR036899 (25.9%)" "Large ribosomal subunit protein uL13 (26.4%) Large ribosomal subunit protein uL13, bacteria (26.4%) Large ribosomal subunit protein uL13 superfamily (25.9%)" MREEDPTWEVEQSKELK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" SGKYDTIICNYPNGDMVGHTGVMEAAVK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "5.4.2.12 (98%) 5.4.2.1 (1.2%) 5.4.2.- (0.8%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (98%) Transferred entry: 5.4.2.11 and 5.4.2.12 (1.2%) Phosphotransferases (phosphomutases) (0.8%)" "GO:0006007 (19.9%) GO:0006096 (19.6%) GO:0005975 (0.1%)" "GO:0005829 (19.9%) GO:0005737 (0.1%)" "GO:0004619 (19.9%) GO:0030145 (19.9%) GO:0016853 (0.5%)" "glucose catabolic process (19.9%) glycolytic process (19.6%) carbohydrate metabolic process (0.1%)" "cytosol (19.9%) cytoplasm (0.1%)" "phosphoglycerate mutase activity (19.9%) manganese ion binding (19.9%) isomerase activity (0.5%)" "IPR005995 (20.3%) IPR006124 (20.3%) IPR017850 (20.3%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.3%) Metalloenzyme (20.3%) Alkaline-phosphatase-like, core domain superfamily (20.3%)" SYTTSLFQSGINK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.5.4.19 (50%) 3.6.1.31 (50%)" "phosphoribosyl-AMP cyclohydrolase (50%) phosphoribosyl-ATP diphosphatase (50%)" GO:0000105 (19.8%) GO:0005737 (19.8%) "GO:0004635 (19.8%) GO:0004636 (19.8%) GO:0005524 (19.8%)" L-histidine biosynthetic process (19.8%) cytoplasm (19.8%) "phosphoribosyl-AMP cyclohydrolase activity (19.8%) phosphoribosyl-ATP diphosphatase activity (19.8%) ATP binding (19.8%)" "IPR002496 (20%) IPR008179 (20%) IPR021130 (20%)" "Phosphoribosyl-AMP cyclohydrolase domain (20%) Phosphoribosyl-ATP pyrophosphohydrolase (20%) Phosphoribosyl-ATP pyrophosphohydrolase-like (20%)" MKEHLSNTIAEIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (13.7%) GO:0030148 (13.7%)" "GO:0005829 (14%) GO:0016020 (13.7%)" "GO:0008890 (14%) GO:0030170 (14%) GO:0004758 (8.4%)" "L-threonine catabolic process to glycine (13.7%) sphingolipid biosynthetic process (13.7%)" "cytosol (14%) membrane (13.7%)" "glycine C-acetyltransferase activity (14%) pyridoxal phosphate binding (14%) serine C-palmitoyltransferase activity (8.4%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" KAGWDTHGLPVELGVEK root 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.4%) GO:0005737 (14.2%) "GO:0004822 (14.4%) GO:0005524 (14.4%) GO:0002161 (14.2%)" isoleucyl-tRNA aminoacylation (14.4%) cytoplasm (14.2%) "isoleucine-tRNA ligase activity (14.4%) ATP binding (14.4%) aminoacyl-tRNA deacylase activity (14.2%)" "IPR002300 (12.1%) IPR023586 (12.1%) IPR014729 (12%)" "Aminoacyl-tRNA synthetase, class Ia (12.1%) Isoleucine-tRNA ligase, type 2 (12.1%) Rossmann-like alpha/beta/alpha sandwich fold (12%)" WNEVDADVVVESTGFFLTDETARK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.1.- (96.2%) 1.2.1.12 (3.8%)" "With NAD(+) or NADP(+) as acceptor (96.2%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (3.8%)" "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0004365 (10.7%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (10.7%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" AVPNIDKLMAHLDVLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0017004 (25%) GO:0030313 (25%) "GO:0016209 (25%) GO:0016491 (25%)" cytochrome complex assembly (25%) cell envelope (25%) "antioxidant activity (25%) oxidoreductase activity (25%)" "IPR000866 (16.7%) IPR013766 (16.7%) IPR017937 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Thioredoxin, conserved site (16.7%)" FAGSPLGHEFTSLVLALLWTGGHPSK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "1.8.1.- (96.2%) 1.6.4.- (3.8%)" "With NAD(+) or NADP(+) as acceptor (96.2%) With a disulfide as acceptor (3.8%)" "GO:0000302 (14.2%) GO:0045454 (0%) GO:0006979 (0%)" "GO:0005829 (14.1%) GO:0032991 (14.1%) GO:0009321 (0%)" "GO:0051287 (14.2%) GO:0102039 (14.2%) GO:0050660 (14.2%)" "response to reactive oxygen species (14.2%) cell redox homeostasis (0%) response to oxidative stress (0%)" "cytosol (14.1%) protein-containing complex (14.1%) alkyl hydroperoxide reductase complex (0%)" "NAD binding (14.2%) NADH-dependent peroxiredoxin activity (14.2%) flavin adenine dinucleotide binding (14.2%)" "IPR036249 (11.4%) IPR044142 (11.4%) IPR012336 (11.2%)" "Thioredoxin-like superfamily (11.4%) AhpF, N-terminal domain, N-terminal TRX-fold subdomain (11.4%) Thioredoxin-like fold (11.2%)" TNQTVTEQSIKEFIETLNVSDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (20.7%) GO:0044208 (20.7%) GO:0006188 (13.8%)" "GO:0004018 (34.5%) GO:0070626 (10.3%)" "'de novo' IMP biosynthetic process (20.7%) 'de novo' AMP biosynthetic process (20.7%) IMP biosynthetic process (13.8%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (34.5%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (10.3%)" "IPR000362 (12.5%) IPR004769 (12.5%) IPR008948 (12.5%)" "Fumarate lyase family (12.5%) Adenylosuccinate lyase (12.5%) L-Aspartase-like (12.5%)" GKYLILNIFPSMDTGVCATSVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" SLLNGVLVQER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (20.1%) IPR016193 (20.1%) IPR024051 (20.1%)" "Bifunctional purine biosynthesis protein PurH-like (20.1%) Cytidine deaminase-like (20.1%) AICAR transformylase, duplicated domain superfamily (20.1%)" RIINEPTAAALAYGLDKQDKN Bacillati Bacteria Bacillati "GO:0005524 (36.4%) GO:0140662 (36.4%) GO:0051082 (27.3%)" "ATP binding (36.4%) ATP-dependent protein folding chaperone (36.4%) unfolded protein binding (27.3%)" "IPR013126 (19%) IPR018181 (19%) IPR043129 (19%)" "Heat shock protein 70 family (19%) Heat shock protein 70, conserved site (19%) ATPase, nucleotide binding domain (19%)" FAITIGDELPAGIIQMAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (19.9%) GO:0000428 (20.1%) "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (19.9%)" DNA-templated transcription (19.9%) DNA-directed RNA polymerase complex (20.1%) "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (19.9%)" "IPR007120 (7.9%) IPR007645 (7.9%) IPR010243 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) RNA polymerase Rpb2, domain 3 (7.9%) DNA-directed RNA polymerase beta subunit, bacterial-type (7.9%)" KASYIDTGTWASNAIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20.2%) GO:0008615 (19.3%)" GO:0005737 (20.2%) "GO:0004648 (20.2%) GO:0030170 (20.2%)" "L-serine biosynthetic process (20.2%) pyridoxine biosynthetic process (19.3%)" cytoplasm (20.2%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20.2%) pyridoxal phosphate binding (20.2%)" "IPR000192 (17.2%) IPR015421 (17.2%) IPR015422 (17.2%)" "Aminotransferase class V domain (17.2%) Pyridoxal phosphate-dependent transferase, major domain (17.2%) Pyridoxal phosphate-dependent transferase, small domain (17.2%)" VYLFEDMRPTPEMSFAIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.- (50%) 5.4.2.2 (50%)" "Phosphotransferases (phosphomutases) (50%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (50%)" "GO:0005975 (24.5%) GO:0006166 (24.5%)" GO:0016020 (0.5%) "GO:0000287 (24.5%) GO:0008973 (24.5%) GO:0004614 (1.6%)" "carbohydrate metabolic process (24.5%) purine ribonucleoside salvage (24.5%)" membrane (0.5%) "magnesium ion binding (24.5%) phosphopentomutase activity (24.5%) phosphoglucomutase activity (1.6%)" "IPR005844 (12.6%) IPR005845 (12.6%) IPR016055 (12.6%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (12.6%)" AAQYVASHPGEVCPAKWK root "1.11.1.26 (96%) 1.11.1.15 (2.6%) 1.11.1.24 (1.3%)" "NADH-dependent peroxiredoxin (96%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (2.6%) thioredoxin-dependent peroxiredoxin (1.3%)" "GO:0006979 (14.8%) GO:0042744 (14.8%) GO:0045454 (14.8%)" "GO:0005829 (14.8%) GO:0005737 (0%) GO:0009321 (0%)" "GO:0008379 (14.8%) GO:0102039 (10.5%) GO:0051920 (0.1%)" "response to oxidative stress (14.8%) hydrogen peroxide catabolic process (14.8%) cell redox homeostasis (14.8%)" "cytosol (14.8%) cytoplasm (0%) alkyl hydroperoxide reductase complex (0%)" "thioredoxin peroxidase activity (14.8%) NADH-dependent peroxiredoxin activity (10.5%) peroxiredoxin activity (0.1%)" "IPR019479 (14.5%) IPR036249 (14.5%) IPR050217 (14.4%)" "Peroxiredoxin, C-terminal (14.5%) Thioredoxin-like superfamily (14.5%) Thiol-specific antioxidant peroxiredoxin (14.4%)" TEHELNANLLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (12.3%) GO:0044210 (12.3%)" "GO:0005829 (12.3%) GO:0097268 (12.3%)" "GO:0003883 (12.3%) GO:0005524 (12.3%) GO:0042802 (12.3%)" "pyrimidine nucleobase biosynthetic process (12.3%) 'de novo' CTP biosynthetic process (12.3%)" "cytosol (12.3%) cytoophidium (12.3%)" "CTP synthase activity (12.3%) ATP binding (12.3%) identical protein binding (12.3%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" DKTKAPAAHIVDENGNYLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) GO:0000428 (16.9%) "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (16.2%)" DNA-templated transcription (16.9%) DNA-directed RNA polymerase complex (16.9%) "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (16.2%)" "IPR007081 (9.4%) IPR045867 (9.4%) IPR000722 (9%)" "RNA polymerase Rpb1, domain 5 (9.4%) DNA-directed RNA polymerase, subunit beta-prime (9.4%) RNA polymerase, alpha subunit (9%)" ETGNLPVPLHLR Bacteria Bacteria "GO:0000731 (14.3%) GO:0006261 (14.3%)" "GO:0003677 (14.3%) GO:0005524 (14.3%) GO:0008047 (14.3%)" "DNA synthesis involved in DNA repair (14.3%) DNA-templated DNA replication (14.3%)" "DNA binding (14.3%) ATP binding (14.3%) enzyme activator activity (14.3%)" "IPR008921 (14.4%) IPR021886 (14.4%) IPR032423 (14.4%)" "DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (14.4%) MgsA AAA+ ATPase, C-terminal (14.4%) AAA C-terminal domain (14.4%)" FDDKTITISDR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (24.6%) GO:0016887 (24.6%) GO:0051082 (24.6%)" "ATP binding (24.6%) ATP hydrolysis activity (24.6%) unfolded protein binding (24.6%)" "IPR001404 (14.4%) IPR003594 (14.4%) IPR019805 (14.4%)" "Heat shock protein Hsp90 family (14.4%) Histidine kinase/HSP90-like ATPase domain (14.4%) Heat shock protein Hsp90, conserved site (14.4%)" HGFDILVGQIDDALK root "GO:0022900 (19.9%) GO:0006508 (0.1%) GO:0071555 (0.1%)" "GO:0042597 (19.6%) GO:0005829 (0.1%)" "GO:0005506 (19.9%) GO:0009055 (19.9%) GO:0020037 (19.9%)" "electron transport chain (19.9%) proteolysis (0.1%) cell wall organization (0.1%)" "periplasmic space (19.6%) cytosol (0.1%)" "iron ion binding (19.9%) electron transfer activity (19.9%) heme binding (19.9%)" "IPR009155 (47.9%) IPR010980 (47.9%) IPR000713 (0.3%)" "Cytochrome b562 (47.9%) Cytochrome c/b562 (47.9%) Mur ligase, N-terminal catalytic domain (0.3%)" ALLDIIGTDALTKEQWTEIQQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (34.1%) "GO:0016615 (31.8%) GO:0016616 (31.8%) GO:0030060 (2.3%)" malate metabolic process (34.1%) "malate dehydrogenase activity (31.8%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (31.8%) L-malate dehydrogenase (NAD+) activity (2.3%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" KIMHSDIEVSATCVR Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11%) GO:0009089 (11%) GO:0009097 (11%)" "GO:0046983 (11.3%) GO:0004073 (11%) GO:0050661 (11%)" "threonine biosynthetic process (11%) lysine biosynthetic process via diaminopimelate (11%) isoleucine biosynthetic process (11%)" "protein dimerization activity (11.3%) aspartate-semialdehyde dehydrogenase activity (11%) NADP binding (11%)" "IPR012280 (20.5%) IPR000534 (19.9%) IPR005986 (19.9%)" "Semialdehyde dehydrogenase, dimerisation domain (20.5%) Semialdehyde dehydrogenase, NAD-binding (19.9%) Aspartate-semialdehyde dehydrogenase, beta-type (19.9%)" RCEEEGVIFIGPSADIIAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.3.4.14 (89.5%) 6.4.1.1 (5.3%) 6.4.1.7 (5.3%)" "biotin carboxylase (89.5%) pyruvate carboxylase (5.3%) 2-oxoglutarate carboxylase (5.3%)" GO:2001295 (17.6%) "GO:0005524 (22%) GO:0046872 (22%) GO:0003989 (16.5%)" malonyl-CoA biosynthetic process (17.6%) "ATP binding (22%) metal ion binding (22%) acetyl-CoA carboxylase activity (16.5%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" DIDKPFLMPVEDVFSITGR Bacteria Bacteria 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (18.3%) GO:0032045 (4.4%) GO:0005737 (0.5%)" "GO:0003746 (18.9%) GO:0005525 (18.8%) GO:0003924 (18.7%)" "cytosol (18.3%) guanyl-nucleotide exchange factor complex (4.4%) cytoplasm (0.5%)" "translation elongation factor activity (18.9%) GTP binding (18.8%) GTPase activity (18.7%)" "IPR050055 (8.5%) IPR000795 (8.4%) IPR004161 (8.4%)" "Elongation factor Tu GTPase (8.5%) Translational (tr)-type GTP-binding domain (8.4%) Translation elongation factor EFTu-like, domain 2 (8.4%)" VLSGPQAQPAGDKAEFIEK Bacteria Bacteria 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25.3%) GO:0019521 (25.3%) GO:0016054 (0.2%)" GO:0005829 (0.1%) "GO:0004616 (25.3%) GO:0050661 (23.3%) GO:0016491 (0.3%)" "pentose-phosphate shunt (25.3%) D-gluconate metabolic process (25.3%) organic acid catabolic process (0.2%)" cytosol (0.1%) "phosphogluconate dehydrogenase (decarboxylating) activity (25.3%) NADP binding (23.3%) oxidoreductase activity (0.3%)" "IPR006114 (12.9%) IPR006183 (12.9%) IPR008927 (12.9%)" "6-phosphogluconate dehydrogenase, C-terminal (12.9%) 6-phosphogluconate dehydrogenase (12.9%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (12.9%)" AYKHILIAVDLSPESK root GO:0006950 (0.5%) "GO:0005737 (99%) GO:0016020 (0.2%)" "GO:0042802 (0.2%) GO:0042803 (0.2%)" response to stress (0.5%) "cytoplasm (99%) membrane (0.2%)" "identical protein binding (0.2%) protein homodimerization activity (0.2%)" "IPR006016 (33.8%) IPR014729 (33.7%) IPR006015 (32.4%)" "UspA (33.8%) Rossmann-like alpha/beta/alpha sandwich fold (33.7%) Universal stress protein A family (32.4%)" AGEKEVQMAIDAAMK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (25%) GO:0009898 (25%) "GO:0003842 (25%) GO:0004657 (25%)" L-proline catabolic process to L-glutamate (25%) cytoplasmic side of plasma membrane (25%) "L-glutamate gamma-semialdehyde dehydrogenase activity (25%) proline dehydrogenase activity (25%)" "IPR005931 (14.3%) IPR015590 (14.3%) IPR016160 (14.3%)" "Delta-1-pyrroline-5-carboxylate dehydrogenase (14.3%) Aldehyde dehydrogenase domain (14.3%) Aldehyde dehydrogenase, cysteine active site (14.3%)" DIEADHLDPQSLLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (12.2%) GO:0005737 (2%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (12.2%) cytoplasm (2%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" VLSMYQDPEQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR011990 (54.5%) IPR019734 (45.5%)" "Tetratricopeptide-like helical domain superfamily (54.5%) Tetratricopeptide repeat (45.5%)" EADYDKLMTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20%) GO:0005737 (20%) "GO:0003676 (20%) GO:0004816 (20%) GO:0005524 (20%)" asparaginyl-tRNA aminoacylation (20%) cytoplasm (20%) "nucleic acid binding (20%) asparagine-tRNA ligase activity (20%) ATP binding (20%)" "IPR002312 (14.3%) IPR004364 (14.3%) IPR004365 (14.3%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.3%) Aminoacyl-tRNA synthetase, class II (D/K/N) (14.3%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (14.3%)" VMGGGFGGCTINLVKDELYDDFVKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10.5%) IPR006203 (10.5%) IPR006204 (10.5%)" "Galactokinase (10.5%) GHMP kinase, ATP-binding, conserved site (10.5%) GHMP kinase N-terminal domain (10.5%)" IYDDPDMSLDIYTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" ELNEALAADKPNCDVVICTPFIHLASVTPIVDK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" TFADNKVEKGNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.23 (100%) beta-galactosidase (100%) "GO:0006004 (24.7%) GO:0016139 (24.7%)" GO:0005764 (24.7%) "GO:0004560 (24.7%) GO:0004565 (1%)" "fucose metabolic process (24.7%) glycoside catabolic process (24.7%)" lysosome (24.7%) "alpha-L-fucosidase activity (24.7%) beta-galactosidase activity (1%)" "IPR000421 (25%) IPR000933 (25%) IPR008979 (25%)" "Coagulation factor 5/8, C-terminal domain (25%) Glycoside hydrolase, family 29 (25%) Galactose-binding-like domain superfamily (25%)" FCVIGAGTGASLRPLYAELVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (33.3%) GO:0006044 (33.3%)" GO:0004342 (33.3%) "carbohydrate metabolic process (33.3%) N-acetylglucosamine metabolic process (33.3%)" glucosamine-6-phosphate deaminase activity (33.3%) "IPR003737 (14.8%) IPR004547 (14.8%) IPR006148 (14.8%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.8%) Glucosamine-6-phosphate isomerase (14.8%) Glucosamine/galactosamine-6-phosphate isomerase (14.8%)" HLGCQSGIIITASHNPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.2 (62.5%) 5.4.2.- (31.3%) 5.4.2.8 (6.3%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (62.5%) Phosphotransferases (phosphomutases) (31.3%) phosphomannomutase (6.3%)" "GO:0005975 (24.1%) GO:0006166 (24.1%)" "GO:0000287 (24.1%) GO:0008973 (24.1%) GO:0004614 (3.4%)" "carbohydrate metabolic process (24.1%) purine ribonucleoside salvage (24.1%)" "magnesium ion binding (24.1%) phosphopentomutase activity (24.1%) phosphoglucomutase activity (3.4%)" "IPR005844 (13%) IPR016055 (13%) IPR016066 (13%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (13%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (13%) Alpha-D-phosphohexomutase, conserved site (13%)" KLLDNAAADLAAISGQKPLITK root "GO:0006412 (16.5%) GO:0000027 (0.1%) GO:0002181 (0.1%)" "GO:0005840 (17.3%) GO:1990904 (16.4%) GO:0005829 (0.2%)" "GO:0003735 (16.5%) GO:0000049 (16.3%) GO:0019843 (16.3%)" "translation (16.5%) ribosomal large subunit assembly (0.1%) cytoplasmic translation (0.1%)" "ribosome (17.3%) ribonucleoprotein complex (16.4%) cytosol (0.2%)" "structural constituent of ribosome (16.5%) tRNA binding (16.3%) rRNA binding (16.3%)" "IPR020929 (16.5%) IPR022803 (16.5%) IPR031310 (16.5%)" "Large ribosomal subunit protein uL5, conserved site (16.5%) Large ribosomal subunit protein uL5 domain superfamily (16.5%) Large ribosomal subunit protein uL5, N-terminal (16.5%)" LIDVIGDIALIGKPIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.5.1.108 (50%) 4.2.1.59 (50%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase (50%) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (50%)" "GO:0006633 (14.3%) GO:0009245 (14.3%)" "GO:0005737 (14.3%) GO:0016020 (14.3%)" "GO:0046872 (14.3%) GO:0103117 (14.3%) GO:0019171 (11%)" "fatty acid biosynthetic process (14.3%) lipid A biosynthetic process (14.3%)" "cytoplasm (14.3%) membrane (14.3%)" "metal ion binding (14.3%) UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.3%) (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (11%)" "IPR004463 (14.3%) IPR010084 (14.3%) IPR011334 (14.3%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.3%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (14.3%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.3%)" GTATSGEGVEGSKDGNSSTGAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0055085 (50%) GO:0016020 (50%) transmembrane transport (50%) membrane (50%) "IPR006260 (50%) IPR037682 (50%)" "TonB/TolA, C-terminal (50%) TonB, C-terminal (50%)" TEHDLNTNLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.8%) GO:0044210 (10.9%) GO:0006241 (0.8%)" "GO:0005829 (11.8%) GO:0097268 (9.2%)" "GO:0003883 (11.8%) GO:0005524 (11.8%) GO:0042802 (11.8%)" "pyrimidine nucleobase biosynthetic process (11.8%) 'de novo' CTP biosynthetic process (10.9%) CTP biosynthetic process (0.8%)" "cytosol (11.8%) cytoophidium (9.2%)" "CTP synthase activity (11.8%) ATP binding (11.8%) identical protein binding (11.8%)" "IPR004468 (17.1%) IPR017456 (17.1%) IPR027417 (17.1%)" "CTP synthase (17.1%) CTP synthase, N-terminal (17.1%) P-loop containing nucleoside triphosphate hydrolase (17.1%)" AIFEAGAPEGIKPIGLGAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (14.5%) GO:0032259 (11.6%) GO:0006546 (0.7%)" "GO:0005829 (15.2%) GO:0005960 (15.2%)" "GO:0004047 (15.2%) GO:0008483 (15.2%) GO:0008168 (11.6%)" "glycine decarboxylation via glycine cleavage system (14.5%) methylation (11.6%) glycine catabolic process (0.7%)" "cytosol (15.2%) glycine cleavage complex (15.2%)" "aminomethyltransferase activity (15.2%) transaminase activity (15.2%) methyltransferase activity (11.6%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" GDKAAAESYLGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (44.8%) IPR019734 (44.8%) IPR013105 (10.3%)" "Tetratricopeptide-like helical domain superfamily (44.8%) Tetratricopeptide repeat (44.8%) Tetratricopeptide repeat 2 (10.3%)" VGTVVCAGGGVGVAPLLPIVEAFHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.18.1.2 (100%) ferredoxin--NADP(+) reductase (100%) GO:0006221 (19.7%) GO:0016020 (0.5%) "GO:0046872 (19.7%) GO:0050660 (19.7%) GO:0051537 (19.7%)" pyrimidine nucleotide biosynthetic process (19.7%) membrane (0.5%) "metal ion binding (19.7%) flavin adenine dinucleotide binding (19.7%) 2 iron, 2 sulfur cluster binding (19.7%)" "IPR017938 (16.3%) IPR039261 (16.3%) IPR050353 (16.3%)" "Riboflavin synthase-like beta-barrel (16.3%) Ferredoxin-NADP reductase (FNR), nucleotide-binding domain (16.3%) Dihydroorotate dehydrogenase B electron transfer subunit (16.3%)" NLLAGNDTFVLMPTGGGK Pseudomonadati Bacteria Pseudomonadati "5.6.2.4 (91.5%) 3.6.4.12 (8.5%)" "DNA 3'-5' helicase (91.5%) DNA helicase (8.5%)" "GO:0006281 (8.4%) GO:0006310 (8.4%) GO:0006260 (8%)" "GO:0005737 (8.4%) GO:0030894 (8.4%) GO:0043590 (8.4%)" "GO:0005524 (8.4%) GO:0009378 (8.4%) GO:0043138 (8.4%)" "DNA repair (8.4%) DNA recombination (8.4%) DNA replication (8%)" "cytoplasm (8.4%) replisome (8.4%) bacterial nucleoid (8.4%)" "ATP binding (8.4%) four-way junction helicase activity (8.4%) 3'-5' DNA helicase activity (8.4%)" "IPR011545 (7.4%) IPR014001 (7.4%) IPR027417 (7.4%)" "DEAD/DEAH-box helicase domain (7.4%) Helicase superfamily 1/2, ATP-binding domain (7.4%) P-loop containing nucleoside triphosphate hydrolase (7.4%)" GMVICHPGQVKEHSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20.5%) "GO:0003746 (20.5%) GO:0003924 (20.5%) GO:0005525 (20.5%)" cytosol (20.5%) "translation elongation factor activity (20.5%) GTPase activity (20.5%) GTP binding (20.5%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" DNKVNMLGMPLPNEEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.5%) GO:0043335 (16.5%) GO:0051083 (16.5%)" "GO:0003755 (16.5%) GO:0043022 (16.5%) GO:0044183 (16.5%)" "protein transport (16.5%) protein unfolding (16.5%) 'de novo' cotranslational protein folding (16.5%)" "peptidyl-prolyl cis-trans isomerase activity (16.5%) ribosome binding (16.5%) protein folding chaperone (16.5%)" "IPR005215 (20.3%) IPR008881 (20.3%) IPR036611 (20.3%)" "Trigger factor (20.3%) Trigger factor, ribosome-binding, bacterial (20.3%) Trigger factor ribosome-binding domain superfamily (20.3%)" QTLLFGGLESIQHNANR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0009328 (16.7%) "GO:0000287 (16.7%) GO:0004826 (16.7%) GO:0005524 (16.7%)" phenylalanyl-tRNA aminoacylation (16.7%) phenylalanine-tRNA ligase complex (16.7%) "magnesium ion binding (16.7%) phenylalanine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR005147 (7.9%) IPR041616 (7.9%) IPR045060 (7.9%)" "tRNA synthetase, B5-domain (7.9%) Phenylalanyl tRNA synthetase beta chain, core domain (7.9%) Phenylalanine-tRNA ligase, class IIc, beta subunit (7.9%)" AVLGLPIPEITQER Bacteroidota Bacteria Pseudomonadati Bacteroidota "6.3.1.21 (91.2%) 2.1.2.- (8.8%)" "phosphoribosylglycinamide formyltransferase 2 (91.2%) Hydroxymethyl-, formyl- and related transferases (8.8%)" "GO:0006189 (16.1%) GO:0009152 (0.5%)" GO:0005829 (16.7%) "GO:0000287 (16.7%) GO:0004644 (16.7%) GO:0005524 (16.7%)" "'de novo' IMP biosynthetic process (16.1%) purine ribonucleotide biosynthetic process (0.5%)" cytosol (16.7%) "magnesium ion binding (16.7%) phosphoribosylglycinamide formyltransferase activity (16.7%) ATP binding (16.7%)" "IPR003135 (12.5%) IPR005862 (12.5%) IPR011054 (12.5%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.5%) Formate-dependent phosphoribosylglycinamide formyltransferase (12.5%) Rudiment single hybrid motif (12.5%)" EIELEDKFENMGAQMVK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.2%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (16.5%) GO:1990220 (0%) GO:0005829 (0%)" "GO:0005524 (17.2%) GO:0140662 (17.2%) GO:0016853 (16.7%)" "protein refolding (17.2%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (16.5%) GroEL-GroES complex (0%) cytosol (0%)" "ATP binding (17.2%) ATP-dependent protein folding chaperone (17.2%) isomerase activity (16.7%)" "IPR001844 (16.9%) IPR002423 (16.9%) IPR027413 (16.8%)" "Chaperonin Cpn60/GroEL (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%) GroEL-like equatorial domain superfamily (16.8%)" NLGGNPENPFTIFPEVAELYAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" TKVPGVFAAGDVADPHYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.8.1.9 (100%) thioredoxin-disulfide reductase (NADPH) (100%) "GO:0019430 (33.1%) GO:0045454 (0.3%)" GO:0005737 (33.1%) "GO:0004791 (33.1%) GO:0016491 (0.6%)" "removal of superoxide radicals (33.1%) cell redox homeostasis (0.3%)" cytoplasm (33.1%) "thioredoxin-disulfide reductase (NADPH) activity (33.1%) oxidoreductase activity (0.6%)" "IPR023753 (20.1%) IPR036188 (20.1%) IPR050097 (20.1%)" "FAD/NAD(P)-binding domain (20.1%) FAD/NAD(P)-binding domain superfamily (20.1%) Ferredoxin--NADP reductase type 2 (20.1%)" NAGEEKYAVLSDILGDEDHLGDMDFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.3%) GO:0006396 (14.1%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "mRNA catabolic process (14.3%) RNA processing (14.1%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR003029 (7.9%) IPR004087 (7.9%) IPR004088 (7.9%)" "S1 domain (7.9%) K Homology domain (7.9%) K Homology domain, type 1 (7.9%)" LVGSLQLDSENINTWK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (21.5%) GO:0009263 (12.5%)" "GO:0004748 (21.9%) GO:0031419 (21.9%) GO:0005524 (12.5%)" "DNA biosynthetic process (21.5%) deoxyribonucleotide biosynthetic process (12.5%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (21.9%) cobalamin binding (21.9%) ATP binding (12.5%)" "IPR000788 (28.1%) IPR050862 (28.1%) IPR013344 (27.7%)" "Ribonucleotide reductase large subunit, C-terminal (28.1%) Ribonucleoside diphosphate reductase class-2 (28.1%) Ribonucleotide reductase, adenosylcobalamin-dependent (27.7%)" GLAFIDNMVKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0000160 (0.8%) "GO:0016301 (49.8%) GO:0005524 (49.4%)" phosphorelay signal transduction system (0.8%) "kinase activity (49.8%) ATP binding (49.4%)" "IPR051549 (25.1%) IPR002192 (24.9%) IPR013815 (24.9%)" "Phosphoenolpyruvate Utilizing Enzyme (25.1%) Pyruvate phosphate dikinase, AMP/ATP-binding (24.9%) ATP-grasp fold, subdomain 1 (24.9%)" SSIHSYRGPGLEEGMK root 2.5.1.55 (100%) 3-deoxy-8-phosphooctulonate synthase (100%) "GO:0019294 (30%) GO:0009103 (3%) GO:0046394 (0.3%)" "GO:0005737 (33%) GO:0005829 (0.1%) GO:0032991 (0%)" "GO:0008676 (33.1%) GO:0016740 (0.3%) GO:0042802 (0%)" "keto-3-deoxy-D-manno-octulosonic acid biosynthetic process (30%) lipopolysaccharide biosynthetic process (3%) carboxylic acid biosynthetic process (0.3%)" "cytoplasm (33%) cytosol (0.1%) protein-containing complex (0%)" "3-deoxy-8-phosphooctulonate synthase activity (33.1%) transferase activity (0.3%) identical protein binding (0%)" "IPR006218 (33.3%) IPR006269 (33.3%) IPR013785 (33.3%)" "DAHP synthetase I/KDSA (33.3%) 3-deoxy-8-phosphooctulonate synthase (33.3%) Aldolase-type TIM barrel (33.3%)" FNKGEKKDDETLSK root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.5%) GO:0006094 (16.5%) GO:0008615 (0.1%)" "GO:0005829 (16.5%) GO:0005737 (0.1%)" "GO:0004618 (16.5%) GO:0005524 (16.5%) GO:0043531 (16.5%)" "glycolytic process (16.5%) gluconeogenesis (16.5%) pyridoxine biosynthetic process (0.1%)" "cytosol (16.5%) cytoplasm (0.1%)" "phosphoglycerate kinase activity (16.5%) ATP binding (16.5%) ADP binding (16.5%)" "IPR001576 (25.1%) IPR015824 (25.1%) IPR036043 (25.1%)" "Phosphoglycerate kinase (25.1%) Phosphoglycerate kinase, N-terminal (25.1%) Phosphoglycerate kinase superfamily (25.1%)" AQFSEEELTDEKLEMIGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.4%) GO:0006402 (14.4%)" GO:0005829 (14.4%) "GO:0000175 (14.4%) GO:0003723 (14.4%) GO:0004654 (14.4%)" "RNA processing (14.4%) mRNA catabolic process (14.4%)" cytosol (14.4%) "3'-5'-RNA exonuclease activity (14.4%) RNA binding (14.4%) polyribonucleotide nucleotidyltransferase activity (14.4%)" "IPR001247 (8.5%) IPR012162 (8.5%) IPR015847 (8.5%)" "Exoribonuclease, phosphorolytic domain 1 (8.5%) Polyribonucleotide nucleotidyltransferase (8.5%) Exoribonuclease, phosphorolytic domain 2 (8.5%)" ELGISQAPEATETK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001854 (25%) IPR018254 (25%) IPR036049 (25%)" "Large ribosomal subunit protein uL29 (25%) Large ribosomal subunit protein uL29, conserved site (25%) Large ribosomal subunit protein uL29 superfamily (25%)" FNSGEGGEQR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (32.7%) "GO:0003723 (32.7%) GO:0120159 (32.7%) GO:0016829 (1.9%)" enzyme-directed rRNA pseudouridine synthesis (32.7%) "RNA binding (32.7%) rRNA pseudouridine synthase activity (32.7%) lyase activity (1.9%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" KIYDICEFLHDVVRPESLPAVFPHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005829 (50%) GO:0016491 (50%) cytosol (50%) oxidoreductase activity (50%) IPR004017 (100%) Cysteine-rich domain (100%) EIVSELDKHIIGQDNAKR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "3.4.21.- (50%) 3.4.25.2 (50%)" "Serine endopeptidases (50%) HslU--HslV peptidase (50%)" "GO:0051603 (14.3%) GO:0043335 (13.2%) GO:0006508 (0.5%)" "GO:0009376 (14.3%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0005524 (14.6%) GO:0008233 (14.5%) GO:0016887 (14.3%)" "proteolysis involved in protein catabolic process (14.3%) protein unfolding (13.2%) proteolysis (0.5%)" "HslUV protease complex (14.3%) cytosol (0.1%) membrane (0.1%)" "ATP binding (14.6%) peptidase activity (14.5%) ATP hydrolysis activity (14.3%)" "IPR027417 (17.4%) IPR050052 (17.1%) IPR003959 (17%)" "P-loop containing nucleoside triphosphate hydrolase (17.4%) ATP-dependent Clp protease ATP-binding subunit ClpX (17.1%) ATPase, AAA-type, core (17%)" QNLATFCQTWDDENVHK root 4.1.1.15 (100%) glutamate decarboxylase (100%) "GO:0006538 (22.1%) GO:0051454 (10.9%)" "GO:0005829 (22.1%) GO:0016020 (0.1%)" "GO:0004351 (22.1%) GO:0030170 (22.1%) GO:0016829 (0.4%)" "L-glutamate catabolic process (22.1%) intracellular pH elevation (10.9%)" "cytosol (22.1%) membrane (0.1%)" "glutamate decarboxylase activity (22.1%) pyridoxal phosphate binding (22.1%) lyase activity (0.4%)" "IPR002129 (22.4%) IPR010107 (22.4%) IPR015424 (22.4%)" "Pyridoxal phosphate-dependent decarboxylase (22.4%) Glutamate decarboxylase (22.4%) Pyridoxal phosphate-dependent transferase (22.4%)" AAYAEEGFYVGANQLDALCNIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" DALKGDPEPGEKVVVIGGDNYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" NALEFLQQVTSNNVATLPVGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (15.5%) GO:0032259 (10.9%)" "GO:0005829 (15.5%) GO:0005960 (15.5%)" "GO:0004047 (15.5%) GO:0008483 (15.5%) GO:0008168 (10.9%)" "glycine decarboxylation via glycine cleavage system (15.5%) methylation (10.9%)" "cytosol (15.5%) glycine cleavage complex (15.5%)" "aminomethyltransferase activity (15.5%) transaminase activity (15.5%) methyltransferase activity (10.9%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" SAYALGGMGSGICKDEAELR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006541 (13.6%) GO:0006221 (13%) GO:0006526 (13%)" GO:0005737 (13.6%) "GO:0004088 (13.6%) GO:0005524 (13.6%) GO:0046872 (13.6%)" "glutamine metabolic process (13.6%) pyrimidine nucleotide biosynthetic process (13%) L-arginine biosynthetic process (13%)" cytoplasm (13.6%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.6%) ATP binding (13.6%) metal ion binding (13.6%)" "IPR005479 (10.2%) IPR005483 (10.2%) IPR011761 (10.2%)" "Carbamoyl phosphate synthase, ATP-binding domain (10.2%) Carbamoyl phosphate synthase, CPSase domain (10.2%) ATP-grasp fold (10.2%)" HNMALVTIEDLVAYR root 4.1.99.12 (100%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (100%) GO:0009231 (20.2%) "GO:0005829 (20%) GO:0005886 (0.2%)" "GO:0008686 (20.2%) GO:0000287 (19%) GO:0030145 (19%)" riboflavin biosynthetic process (20.2%) "cytosol (20%) plasma membrane (0.2%)" "3,4-dihydroxy-2-butanone-4-phosphate synthase activity (20.2%) magnesium ion binding (19%) manganese ion binding (19%)" "IPR000422 (50%) IPR017945 (50%)" "3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB (50%) DHBP synthase RibB-like alpha/beta domain superfamily (50%)" KYGGFYLGSIGGPAAILAQNNIK root 4.2.1.2 (100%) fumarate hydratase (100%) "GO:0006099 (19.1%) GO:0006091 (0.8%) GO:0006106 (0.6%)" GO:0005829 (0.2%) "GO:0004333 (19.9%) GO:0046872 (19.9%) GO:0051539 (19.9%)" "tricarboxylic acid cycle (19.1%) generation of precursor metabolites and energy (0.8%) fumarate metabolic process (0.6%)" cytosol (0.2%) "fumarate hydratase activity (19.9%) metal ion binding (19.9%) 4 iron, 4 sulfur cluster binding (19.9%)" "IPR004647 (16.9%) IPR036660 (16.9%) IPR051208 (16.9%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.9%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (16.9%) Class-I Fumarase/Tartrate Dehydratase (16.9%)" SSFQSPSYVSIEMIAAAMGGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (34.5%) "GO:0016616 (30.9%) GO:0016615 (30%) GO:0030060 (4.5%)" malate metabolic process (34.5%) "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (30.9%) malate dehydrogenase activity (30%) L-malate dehydrogenase (NAD+) activity (4.5%)" "IPR015955 (17%) IPR022383 (17%) IPR001236 (16.5%)" "Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (17%) Lactate/malate dehydrogenase, C-terminal (17%) Lactate/malate dehydrogenase, N-terminal (16.5%)" MGEVSALADKLKCEVIPADATSVEDLENVFKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" YTDKAQLLDAVK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "1.1.1.95 (84.6%) 1.1.1.81 (15.4%)" "phosphoglycerate dehydrogenase (84.6%) hydroxypyruvate reductase (15.4%)" GO:0006564 (0.8%) "GO:0051287 (46.9%) GO:0016616 (35.4%) GO:0004617 (10%)" L-serine biosynthetic process (0.8%) "NAD binding (46.9%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (35.4%) phosphoglycerate dehydrogenase activity (10%)" "IPR006139 (31%) IPR006140 (31%) IPR036291 (31%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (31%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (31%) NAD(P)-binding domain superfamily (31%)" GKDYAENETVTLDMPTTSNVLQYFTEDNTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (24.3%) GO:0006166 (24.3%)" "GO:0000287 (24.3%) GO:0008973 (24.3%) GO:0004614 (2.7%)" "carbohydrate metabolic process (24.3%) purine ribonucleoside salvage (24.3%)" "magnesium ion binding (24.3%) phosphopentomutase activity (24.3%) phosphoglucomutase activity (2.7%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" NKDGVIYLTHTEVPMELGGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR016181 (33.3%) IPR031165 (33.3%) IPR045057 (33.3%)" "Acyl-CoA N-acyltransferase (33.3%) Yjdj-type Gcn5-related N-acetyltransferase (33.3%) Gcn5-related N-acetyltransferase (33.3%)" VHGDVYNYNEREYDDDYYSQPGALFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" GO:0005737 (16.7%) "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16.7%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" cytoplasm (16.7%) "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16.7%)" "IPR002226 (12.5%) IPR010582 (12.5%) IPR011614 (12.5%)" "Catalase haem-binding site (12.5%) Catalase immune-responsive domain (12.5%) Catalase core domain (12.5%)" ETIFDEDEYIINIGPQHPATHGVLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "7.1.1.- (95.2%) 1.6.5.11 (4.8%)" "Hydron translocation or charge separation linked to oxidoreductase reactions (95.2%) Transferred entry: 1.6.5.9 (4.8%)" "GO:0005886 (15.7%) GO:0030964 (11%) GO:0005737 (10.2%)" "GO:0008137 (15.7%) GO:0048038 (15.7%) GO:0050136 (15.7%)" "plasma membrane (15.7%) NADH dehydrogenase complex (11%) cytoplasm (10.2%)" "NADH dehydrogenase (ubiquinone) activity (15.7%) quinone binding (15.7%) NADH dehydrogenase (quinone) (non-electrogenic) activity (15.7%)" "IPR001135 (17.5%) IPR001268 (17.5%) IPR022885 (17.5%)" "NADH-quinone oxidoreductase, subunit D (17.5%) NADH:ubiquinone oxidoreductase, 30kDa subunit (17.5%) NAD(P)H-quinone oxidoreductase subunit D/H (17.5%)" VKPFQQYTEAPKPGILVTNPPYGER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.1.1.173 (100%) 23S rRNA (guanine(2445)-N(2))-methyltransferase (100%) "GO:0003723 (33.3%) GO:0070043 (33.3%) GO:0008990 (27.3%)" "RNA binding (33.3%) rRNA (guanine-N7-)-methyltransferase activity (33.3%) rRNA (guanine-N2-)-methyltransferase activity (27.3%)" "IPR000241 (16.7%) IPR002052 (16.7%) IPR004114 (16.7%)" "Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain (16.7%) DNA methylase, N-6 adenine-specific, conserved site (16.7%) THUMP domain (16.7%)" SNPATYTGVFSDIR Bacteria Bacteria 3.1.25.- (100%) Site-specific endodeoxyribonucleases specific for altered bases (100%) "GO:0006289 (12.3%) GO:0009432 (0.4%) GO:0006281 (0.2%)" "GO:0005737 (12.5%) GO:0009380 (12.3%) GO:0005829 (0%)" "GO:0003677 (12.5%) GO:0005524 (12.5%) GO:0008270 (12.4%)" "nucleotide-excision repair (12.3%) SOS response (0.4%) DNA repair (0.2%)" "cytoplasm (12.5%) excinuclease repair complex (12.3%) cytosol (0%)" "DNA binding (12.5%) ATP binding (12.5%) zinc ion binding (12.4%)" "IPR027417 (14.5%) IPR017871 (14.4%) IPR004602 (14.3%)" "P-loop containing nucleoside triphosphate hydrolase (14.5%) ABC transporter-like, conserved site (14.4%) UvrABC system subunit A (14.3%)" MKQDMIVILDLGSHENTVLAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0006177 (0.4%) GO:0005829 (33%) "GO:0003921 (33%) GO:0005524 (33%) GO:0016740 (0.4%)" GMP biosynthetic process (0.4%) cytosol (33%) "GMP synthase activity (33%) ATP binding (33%) transferase activity (0.4%)" "IPR017926 (16.9%) IPR025777 (16.7%) IPR029062 (16.7%)" "Glutamine amidotransferase (16.9%) GMP synthetase ATP pyrophosphatase domain (16.7%) Class I glutamine amidotransferase-like (16.7%)" SEDYKYTDVAQAFAPDYGLNINR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016226 (100%) iron-sulfur cluster assembly (100%) "IPR000825 (20%) IPR011542 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufD (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" IFPIESPAIDSIEVNKVGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (32.9%) "GO:0022625 (32.9%) GO:0005840 (0.5%) GO:1990904 (0.5%)" GO:0003735 (33.3%) translation (32.9%) "cytosolic large ribosomal subunit (32.9%) ribosome (0.5%) ribonucleoprotein complex (0.5%)" structural constituent of ribosome (33.3%) "IPR001857 (25%) IPR008991 (25%) IPR018257 (25%)" "Large ribosomal subunit protein bL19 (25%) Translation protein SH3-like domain superfamily (25%) Large ribosomal subunit protein bL19, conserved site (25%)" YLSFDSTKDKYMMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) YMENSLKEQEK root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (36%) GO:0042026 (0%)" "GO:0030313 (23.7%) GO:0042597 (3.6%) GO:0030288 (0%)" "GO:0003755 (35.9%) GO:0016853 (0.7%) GO:0044183 (0%)" "protein folding (36%) protein refolding (0%)" "cell envelope (23.7%) periplasmic space (3.6%) outer membrane-bounded periplasmic space (0%)" "peptidyl-prolyl cis-trans isomerase activity (35.9%) isomerase activity (0.7%) protein folding chaperone (0%)" "IPR036944 (25.2%) IPR000774 (25.2%) IPR046357 (24.8%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25.2%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25.2%) Peptidyl-prolyl cis-trans isomerase domain superfamily (24.8%)" EGFSGFAHWMK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.16.3.2 (97.4%) 1.16.3.1 (2.6%)" "bacterial non-heme ferritin (97.4%) ferroxidase (2.6%)" "GO:0006826 (14.3%) GO:0006879 (14.3%)" "GO:0005829 (14.3%) GO:0005737 (0.4%)" "GO:0004322 (14.3%) GO:0008198 (14.3%) GO:0008199 (14.3%)" "iron ion transport (14.3%) intracellular iron ion homeostasis (14.3%)" "cytosol (14.3%) cytoplasm (0.4%)" "ferroxidase activity (14.3%) ferrous iron binding (14.3%) ferric iron binding (14.3%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" EYCTDVNVIPIDSIYTPIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.6%) "GO:0000428 (16.8%) GO:0005737 (16.6%)" "GO:0003677 (16.6%) GO:0003899 (16.6%) GO:0046983 (16.6%)" DNA-templated transcription (16.6%) "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.6%)" "DNA binding (16.6%) DNA-directed RNA polymerase activity (16.6%) protein dimerization activity (16.6%)" "IPR011262 (16.7%) IPR011263 (16.7%) IPR011773 (16.7%)" "DNA-directed RNA polymerase, insert domain (16.7%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.7%) DNA-directed RNA polymerase, alpha subunit (16.7%)" YSWAPEGGAPIIEEIPAEEKDKAMELHK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.1%) IPR000795 (7.1%) IPR005225 (7.1%)" "Elongation factor EFG, domain V-like (7.1%) Translational (tr)-type GTP-binding domain (7.1%) Small GTP-binding domain (7.1%)" EYNGGMGSNGLTSAR root 6.3.3.1 (100%) phosphoribosylformylglycinamidine cyclo-ligase (100%) "GO:0006189 (16.7%) GO:0046084 (16.7%) GO:0006164 (0%)" "GO:0005829 (16.7%) GO:0016020 (0%)" "GO:0004637 (16.7%) GO:0004641 (16.7%) GO:0005524 (16.4%)" "'de novo' IMP biosynthetic process (16.7%) adenine biosynthetic process (16.7%) purine nucleotide biosynthetic process (0%)" "cytosol (16.7%) membrane (0%)" "phosphoribosylamine-glycine ligase activity (16.7%) phosphoribosylformylglycinamidine cyclo-ligase activity (16.7%) ATP binding (16.4%)" "IPR004733 (20.1%) IPR036676 (20.1%) IPR016188 (20%)" "Phosphoribosylformylglycinamidine cyclo-ligase (20.1%) PurM-like, C-terminal domain superfamily (20.1%) PurM-like, N-terminal domain (20%)" KFNTELDELLKER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) GO:0042777 (23.6%) "GO:0005524 (23.6%) GO:0046933 (23.6%) GO:0046961 (23.6%)" proton motive force-driven plasma membrane ATP synthesis (23.6%) "ATP binding (23.6%) proton-transporting ATP synthase activity, rotational mechanism (23.6%) proton-transporting ATPase activity, rotational mechanism (23.6%)" "IPR000194 (14.3%) IPR004100 (14.3%) IPR020003 (14.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (14.3%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (14.3%)" GYFYGNLDEMFDQIHGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (24.7%) GO:0005829 (24.7%) "GO:0003937 (24.7%) GO:0004643 (24.7%) GO:0016740 (1.1%)" 'de novo' IMP biosynthetic process (24.7%) cytosol (24.7%) "IMP cyclohydrolase activity (24.7%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (24.7%) transferase activity (1.1%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" THHTFSFANYYNPER Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.13.11.24 (100%) quercetin 2,3-dioxygenase (100%) "GO:0046872 (78.4%) GO:0008127 (18.9%) GO:0051213 (2.7%)" "metal ion binding (78.4%) quercetin 2,3-dioxygenase activity (18.9%) dioxygenase activity (2.7%)" "IPR003829 (20%) IPR011051 (20%) IPR012093 (20%)" "Pirin, N-terminal domain (20%) RmlC-like cupin domain superfamily (20%) Pirin (20%)" ERQEQQEQEAAELQAVTAIAEGR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (24.5%) GO:0006352 (0.1%) GO:0006879 (0%)" "GO:0000428 (24.9%) GO:0000345 (0.1%) GO:0005829 (0%)" "GO:0003677 (24.6%) GO:0003899 (24.6%) GO:0016779 (0.3%)" "DNA-templated transcription (24.5%) DNA-templated transcription initiation (0.1%) intracellular iron ion homeostasis (0%)" "DNA-directed RNA polymerase complex (24.9%) cytosolic DNA-directed RNA polymerase complex (0.1%) cytosol (0%)" "DNA binding (24.6%) DNA-directed RNA polymerase activity (24.6%) nucleotidyltransferase activity (0.3%)" "IPR036161 (33.4%) IPR003716 (33.3%) IPR006110 (33.3%)" "RPB6/omega subunit-like superfamily (33.4%) DNA-directed RNA polymerase, omega subunit (33.3%) RNA polymerase, subunit omega/Rpo6/RPB6 (33.3%)" SDKIIHLTDDSFDTDVLK root "GO:0045454 (33.1%) GO:0006353 (0.1%)" "GO:0005829 (33.1%) GO:0005737 (0.1%)" "GO:0015035 (33.2%) GO:0003723 (0.1%) GO:0004386 (0.1%)" "cell redox homeostasis (33.1%) DNA-templated transcription termination (0.1%)" "cytosol (33.1%) cytoplasm (0.1%)" "protein-disulfide reductase activity (33.2%) RNA binding (0.1%) helicase activity (0.1%)" "IPR036249 (25%) IPR013766 (24.9%) IPR005746 (24.7%)" "Thioredoxin-like superfamily (25%) Thioredoxin domain (24.9%) Thioredoxin (24.7%)" EILLGTNQYPNFNEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" FSGNYGNMTEVSYQVAK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0006950 (100%) response to stress (100%) "IPR025543 (20.3%) IPR051096 (20.3%) IPR010854 (20.2%)" "Dodecin-like (20.3%) BhsA/McbA stress and biofilm-associated protein (20.3%) YdgH/BhsA/McbA-like domain (20.2%)" MIMLITPETSEER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "4.2.1.20 (97.7%) 5.3.1.24 (2.3%)" "tryptophan synthase (97.7%) phosphoribosylanthranilate isomerase (2.3%)" GO:0005829 (49.4%) "GO:0004834 (49.4%) GO:0004640 (1.2%)" cytosol (49.4%) "tryptophan synthase activity (49.4%) phosphoribosylanthranilate isomerase activity (1.2%)" "IPR002028 (24.8%) IPR011060 (24.8%) IPR013785 (24.8%)" "Tryptophan synthase, alpha chain (24.8%) Ribulose-phosphate binding barrel (24.8%) Aldolase-type TIM barrel (24.8%)" ERVLAGKPYFSVASGGGTGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR025964 (100%) GGGtGRT protein (100%) VAEYLAQNDKVAWVNYCGLPGNK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.5.1.49 (66.7%) 4.4.1.11 (33.3%)" "O-acetylhomoserine aminocarboxypropyltransferase (66.7%) methionine gamma-lyase (33.3%)" "GO:0006535 (13.9%) GO:0019346 (13.9%) GO:0071269 (13.9%)" GO:0005737 (13.9%) "GO:0003961 (13.9%) GO:0004124 (13.9%) GO:0030170 (13.9%)" "cysteine biosynthetic process from serine (13.9%) transsulfuration (13.9%) L-homocysteine biosynthetic process (13.9%)" cytoplasm (13.9%) "O-acetylhomoserine aminocarboxypropyltransferase activity (13.9%) cysteine synthase activity (13.9%) pyridoxal phosphate binding (13.9%)" "IPR000277 (20%) IPR006235 (20%) IPR015421 (20%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (20%) O-acetylhomoserine/O-acetylserine sulfhydrylase (20%) Pyridoxal phosphate-dependent transferase, major domain (20%)" QHNDANVLVMPGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.3.1.6 (98.6%) 5.3.1.- (1.4%)" "ribose-5-phosphate isomerase (98.6%) Interconverting aldoses and ketoses (1.4%)" "GO:0009052 (33%) GO:0019316 (33%) GO:0005975 (0.3%)" "GO:0004751 (33%) GO:0016853 (0.3%) GO:0016861 (0.3%)" "pentose-phosphate shunt, non-oxidative branch (33%) D-allose catabolic process (33%) carbohydrate metabolic process (0.3%)" "ribose-5-phosphate isomerase activity (33%) isomerase activity (0.3%) intramolecular oxidoreductase activity, interconverting aldoses and ketoses (0.3%)" "IPR003500 (34.4%) IPR036569 (34.4%) IPR004785 (31.3%)" "Sugar-phosphate isomerase, RpiB/LacA/LacB family (34.4%) Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily (34.4%) Ribose 5-phosphate isomerase B (31.3%)" IEPNKLDELLHPVFDK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10.1%) IPR002192 (10.1%) IPR008279 (10.1%)" "PEP-utilising enzyme, C-terminal (10.1%) Pyruvate phosphate dikinase, AMP/ATP-binding (10.1%) PEP-utilising enzyme, mobile domain (10.1%)" GIEVLGTCDNTYPLQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.5%) GO:0005737 (17.9%) "GO:0003676 (20.5%) GO:0004816 (20.5%) GO:0005524 (20.5%)" asparaginyl-tRNA aminoacylation (20.5%) cytoplasm (17.9%) "nucleic acid binding (20.5%) asparagine-tRNA ligase activity (20.5%) ATP binding (20.5%)" "IPR004364 (14.4%) IPR004365 (14.4%) IPR004522 (14.4%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (14.4%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (14.4%) Asparagine-tRNA ligase (14.4%)" VRGEEAIISADDSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" KDCFENLCEAGVIDPAKVTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" SGEIIDLGSELNIIKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006281 (12.5%) GO:0006310 (12.5%) GO:0009432 (12.5%)" GO:0005829 (12.5%) "GO:0003684 (12.5%) GO:0003697 (12.5%) GO:0005524 (12.5%)" "DNA repair (12.5%) DNA recombination (12.5%) SOS response (12.5%)" cytosol (12.5%) "damaged DNA binding (12.5%) single-stranded DNA binding (12.5%) ATP binding (12.5%)" "IPR003593 (11.1%) IPR013765 (11.1%) IPR020584 (11.1%)" "AAA+ ATPase domain (11.1%) DNA recombination and repair protein RecA (11.1%) DNA recombination/repair protein RecA, conserved site (11.1%)" ALIEAELEQQKKDIISK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.1%) "GO:0022627 (22.6%) GO:0005737 (1.5%) GO:0005840 (1.5%)" "GO:0003729 (24.1%) GO:0003735 (24.1%) GO:0004654 (0.5%)" translation (24.1%) "cytosolic small ribosomal subunit (22.6%) cytoplasm (1.5%) ribosome (1.5%)" "mRNA binding (24.1%) structural constituent of ribosome (24.1%) polyribonucleotide nucleotidyltransferase activity (0.5%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" ALYALGEAPLPSFIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.99.17 (100%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (100%) "GO:0002099 (32.7%) GO:0008616 (1.8%)" GO:0005737 (32.7%) GO:0051075 (32.7%) "tRNA wobble guanine modification (32.7%) tRNA queuosine(34) biosynthetic process (1.8%)" cytoplasm (32.7%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity (32.7%) "IPR003699 (25%) IPR036100 (25%) IPR042118 (25%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA (25%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily (25%) QueA, domain 1 (25%)" MVNYKDLGLVNTR Bacteria Bacteria "4.1.2.13 (98.4%) 4.1.2.- (1.6%)" "fructose-bisphosphate aldolase (98.4%) Aldehyde-lyases (1.6%)" "GO:0006096 (24.2%) GO:0030388 (24.2%) GO:0005975 (1.1%)" "GO:0008270 (25.2%) GO:0004332 (24.4%) GO:0016832 (0.8%)" "glycolytic process (24.2%) fructose 1,6-bisphosphate metabolic process (24.2%) carbohydrate metabolic process (1.1%)" "zinc ion binding (25.2%) fructose-bisphosphate aldolase activity (24.4%) aldehyde-lyase activity (0.8%)" "IPR000771 (25.3%) IPR013785 (25.3%) IPR050246 (25.3%)" "Fructose-bisphosphate aldolase, class-II (25.3%) Aldolase-type TIM barrel (25.3%) Class II Fructose-bisphosphate Aldolase (25.3%)" LKGVNFVYMGDAR Clostridia Bacteria Bacillati Bacillota Clostridia 2.1.3.3 (100%) ornithine carbamoyltransferase (100%) "GO:0019240 (20.1%) GO:0042450 (20.1%)" GO:0005737 (19.4%) "GO:0004585 (20.1%) GO:0016597 (20.1%)" "citrulline biosynthetic process (20.1%) L-arginine biosynthetic process via ornithine (20.1%)" cytoplasm (19.4%) "ornithine carbamoyltransferase activity (20.1%) amino acid binding (20.1%)" "IPR002292 (16.7%) IPR006130 (16.7%) IPR006131 (16.7%)" "Ornithine/putrescine carbamoyltransferase (16.7%) Aspartate/ornithine carbamoyltransferase (16.7%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (16.7%)" VAVIGGGNTAVEEALYLSNIASEVHLIHRR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 1.8.1.9 (100%) thioredoxin-disulfide reductase (NADPH) (100%) "GO:0019430 (19.3%) GO:0045454 (0.1%)" "GO:0005829 (19.6%) GO:0032991 (19.6%) GO:0005737 (0.1%)" "GO:0004791 (19.8%) GO:0050660 (18.1%) GO:0043168 (1.5%)" "removal of superoxide radicals (19.3%) cell redox homeostasis (0.1%)" "cytosol (19.6%) protein-containing complex (19.6%) cytoplasm (0.1%)" "thioredoxin-disulfide reductase (NADPH) activity (19.8%) flavin adenine dinucleotide binding (18.1%) anion binding (1.5%)" "IPR008255 (20.1%) IPR023753 (20.1%) IPR036188 (20.1%)" "Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (20.1%) FAD/NAD(P)-binding domain (20.1%) FAD/NAD(P)-binding domain superfamily (20.1%)" AIITDSYQGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (16.7%) "GO:0000287 (16.7%) GO:0004743 (16.7%) GO:0005524 (16.7%)" response to stress (16.7%) "magnesium ion binding (16.7%) pyruvate kinase activity (16.7%) ATP binding (16.7%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" LSGGVAVLYVGAASEVEMKEK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.4%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (15.5%) GO:1990220 (0.1%)" "GO:0005524 (17.4%) GO:0140662 (17.4%) GO:0016853 (16.4%)" "protein refolding (17.4%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (15.5%) GroEL-GroES complex (0.1%)" "ATP binding (17.4%) ATP-dependent protein folding chaperone (17.4%) isomerase activity (16.4%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR027409 (16.7%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like apical domain superfamily (16.7%)" AIPLSYFEAHAELK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales AILPIPVDETNVNPNLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.7%) IPR012944 (33.7%) IPR033985 (32.6%)" "Tetratricopeptide-like helical domain superfamily (33.7%) RagB/SusD domain (33.7%) SusD-like, N-terminal (32.6%)" LLHLEEELHQR Bacteria Bacteria "GO:0034605 (18.6%) GO:0042026 (17.8%) GO:0006508 (3.4%)" GO:0005737 (18.6%) "GO:0005524 (18.6%) GO:0016887 (18.6%) GO:0008233 (3.4%)" "cellular response to heat (18.6%) protein refolding (17.8%) proteolysis (3.4%)" cytoplasm (18.6%) "ATP binding (18.6%) ATP hydrolysis activity (18.6%) peptidase activity (3.4%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" ASMISPDFVGHTIAVHNGNK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0000028 (16.7%) GO:0006412 (16.7%)" "GO:0005737 (16.7%) GO:0015935 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16.7%)" "ribosomal small subunit assembly (16.7%) translation (16.7%)" "cytoplasm (16.7%) small ribosomal subunit (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR002222 (25%) IPR005732 (25%) IPR020934 (25%)" "Small ribosomal subunit protein uS19 (25%) Small ribosomal subunit protein uS19, bacteria (25%) Small ribosomal subunit protein uS19, conserved site (25%)" DNFATVKDNER root FDGTVEVKDGHLIVNGK root "1.2.1.- (93%) 1.2.1.12 (7%)" "With NAD(+) or NADP(+) as acceptor (93%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (7%)" "GO:0072524 (19.8%) GO:0006006 (18.8%) GO:0006096 (0.5%)" "GO:0005737 (0.4%) GO:0005576 (0%) GO:0005829 (0%)" "GO:0051287 (20.6%) GO:0050661 (18.8%) GO:0004365 (16.8%)" "pyridine-containing compound metabolic process (19.8%) glucose metabolic process (18.8%) glycolytic process (0.5%)" "cytoplasm (0.4%) extracellular region (0%) cytosol (0%)" "NAD binding (20.6%) NADP binding (18.8%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (16.8%)" "IPR020828 (17.1%) IPR020831 (17.1%) IPR036291 (17.1%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (17.1%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.1%) NAD(P)-binding domain superfamily (17.1%)" VLVPDLNAGCSLADSCPATEFAEFVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.5.1.72 (100%) quinolinate synthase (100%) GO:0034628 (20%) GO:0005829 (20%) "GO:0008987 (20%) GO:0046872 (20%) GO:0051539 (20%)" 'de novo' NAD+ biosynthetic process from L-aspartate (20%) cytosol (20%) "quinolinate synthetase A activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR003473 (33.3%) IPR023066 (33.3%) IPR036094 (33.3%)" "Quinolinate synthetase A (33.3%) Quinolinate synthase A, type 2 (33.3%) Quinolinate synthetase A superfamily (33.3%)" TMKEDILEGFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.9%) IPR001867 (16.9%) IPR011006 (16.9%)" "Signal transduction response regulator, receiver domain (16.9%) OmpR/PhoB-type DNA-binding domain (16.9%) CheY-like superfamily (16.9%)" VHNTRGEVVEPDPNGPTSLYFFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.1%) IPR000795 (7.1%) IPR005225 (7.1%)" "Elongation factor EFG, domain V-like (7.1%) Translational (tr)-type GTP-binding domain (7.1%) Small GTP-binding domain (7.1%)" FVNLNDDRGTNEINSGLNTVDSPGDQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.5%) IPR008969 (12.5%) IPR012910 (12.5%)" "TonB-dependent receptor-like, beta-barrel (12.5%) Carboxypeptidase-like, regulatory domain superfamily (12.5%) TonB-dependent receptor, plug domain (12.5%)" LAQEVLAASVNGEVWDLSRPINDDATVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.7%) GO:0005737 (16.7%) "GO:0000049 (16.7%) GO:0004829 (16.7%) GO:0005524 (16.7%)" threonyl-tRNA aminoacylation (16.7%) cytoplasm (16.7%) "tRNA binding (16.7%) threonine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" EFWNVVNWDEAAAR root 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0019430 (0.1%) GO:0006801 (0.1%) GO:0006979 (0.1%)" "GO:0005737 (32.9%) GO:0005829 (0.1%)" "GO:0004784 (33.1%) GO:0030145 (31.9%) GO:0046872 (1.1%)" "removal of superoxide radicals (0.1%) superoxide metabolic process (0.1%) response to oxidative stress (0.1%)" "cytoplasm (32.9%) cytosol (0.1%)" "superoxide dismutase activity (33.1%) manganese ion binding (31.9%) metal ion binding (1.1%)" "IPR019832 (16.9%) IPR036314 (16.9%) IPR019833 (16.7%)" "Manganese/iron superoxide dismutase, C-terminal (16.9%) Manganese/iron superoxide dismutase, C-terminal domain superfamily (16.9%) Manganese/iron superoxide dismutase, binding site (16.7%)" FGVVQPNIQSLEDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006605 (19.7%) GO:0043952 (19.7%) GO:0065002 (19.7%)" GO:0005886 (20.2%) GO:0015450 (20%) "protein targeting (19.7%) protein transport by the Sec complex (19.7%) intracellular protein transmembrane transport (19.7%)" plasma membrane (20.2%) protein-transporting ATPase activity (20%) "IPR022813 (11.2%) IPR048631 (11.2%) IPR005791 (11.1%)" "Protein-export membrane protein SecD/SecF, archaeal and bacterial (11.2%) Protein translocase subunit SecDF, P1 domain, N-terminal (11.2%) Protein translocase subunit SecD (11.1%)" VLDAEEQKGANFEMLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.7.1 (69.2%) 1.2.7.- (30.8%)" "pyruvate synthase (69.2%) With an iron-sulfur protein as acceptor (30.8%)" "GO:0006979 (14.9%) GO:0022900 (14.9%) GO:0044281 (10.8%)" "GO:0005506 (14.9%) GO:0030976 (14.9%) GO:0051539 (14.9%)" "response to oxidative stress (14.9%) electron transport chain (14.9%) small molecule metabolic process (10.8%)" "iron ion binding (14.9%) thiamine pyrophosphate binding (14.9%) 4 iron, 4 sulfur cluster binding (14.9%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" GMPSSSVLGGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033104 (100%) type VI protein secretion system complex (100%) IPR041408 (100%) Hemolysin coregulated protein (Hcp) TssD (100%) KHPDIIVIADEIYEHINYIGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" FHASVNQSILK Bacteria Bacteria 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (25.2%) GO:0005829 (24.3%) "GO:0004354 (25.2%) GO:0000166 (24.3%) GO:0004352 (0.9%)" glutamate biosynthetic process (25.2%) cytosol (24.3%) "glutamate dehydrogenase (NADP+) activity (25.2%) nucleotide binding (24.3%) glutamate dehydrogenase (NAD+) activity (0.9%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" DRFQFSELGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "2.1.3.11 (83.3%) 2.1.3.9 (16.7%)" "N-succinylornithine carbamoyltransferase (83.3%) N-acetylornithine carbamoyltransferase (16.7%)" "GO:0019240 (25%) GO:0042450 (25%)" "GO:0004585 (25%) GO:0016597 (25%)" "citrulline biosynthetic process (25%) L-arginine biosynthetic process via ornithine (25%)" "ornithine carbamoyltransferase activity (25%) amino acid binding (25%)" "IPR006130 (20%) IPR006131 (20%) IPR006132 (20%)" "Aspartate/ornithine carbamoyltransferase (20%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (20%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20%)" AYKLELAAPGMTKEDFSVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" QINEEIIRDTVASGSPINAIMLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR005886 (33.3%) IPR036291 (33.3%) IPR001509 (29.2%)" "UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD-dependent epimerase/dehydratase (29.2%)" ELLSFYQFDGDNTPIIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20.6%) "GO:0003746 (20.6%) GO:0003924 (20.6%) GO:0005525 (20.6%)" cytosol (20.6%) "translation elongation factor activity (20.6%) GTPase activity (20.6%) GTP binding (20.6%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" LLTAGSVDDGKSTLIGR root 2.7.7.4 (100%) sulfate adenylyltransferase (100%) "GO:0000103 (10.6%) GO:0070814 (10.6%) GO:0006790 (6.9%)" "GO:0003924 (17.7%) GO:0005525 (17.7%) GO:0005524 (17.4%)" "sulfate assimilation (10.6%) hydrogen sulfide biosynthetic process (10.6%) sulfur compound metabolic process (6.9%)" "GTPase activity (17.7%) GTP binding (17.7%) ATP binding (17.4%)" "IPR000795 (9%) IPR027417 (9%) IPR050100 (9%)" "Translational (tr)-type GTP-binding domain (9%) P-loop containing nucleoside triphosphate hydrolase (9%) Translation factor GTPase superfamily members (9%)" RGNSYYGYSYTSTDPALGTTYYYYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) GQDLFAHINLIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" FLLHYNFPPFSTGEAK Pseudomonadati Bacteria Pseudomonadati 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.3%) GO:0006396 (14.2%) GO:0006401 (0.1%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "mRNA catabolic process (14.3%) RNA processing (14.2%) RNA catabolic process (0.1%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8%) IPR012162 (8%) IPR015847 (8%)" "Exoribonuclease, phosphorolytic domain 1 (8%) Polyribonucleotide nucleotidyltransferase (8%) Exoribonuclease, phosphorolytic domain 2 (8%)" KVENNAFLTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0050821 (25%) "GO:0005829 (25%) GO:0016020 (25%)" GO:0051082 (25%) protein stabilization (25%) "cytosol (25%) membrane (25%)" unfolded protein binding (25%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" TGEVPADVAAQAR root "3.5.4.- (72.7%) 3.5.99.10 (18.2%) 2.1.3.2 (3%)" "In cyclic amidines (72.7%) 2-iminobutanoate/2-iminopropanoate deaminase (18.2%) aspartate carbamoyltransferase (3%)" "GO:0009097 (1.1%) GO:0009636 (1.1%) GO:0006207 (0.4%)" "GO:0005829 (44.1%) GO:0005759 (0.4%) GO:0005886 (0.4%)" "GO:0019239 (42.3%) GO:0120242 (1.1%) GO:0120243 (1.1%)" "isoleucine biosynthetic process (1.1%) response to toxic substance (1.1%) 'de novo' pyrimidine nucleobase biosynthetic process (0.4%)" "cytosol (44.1%) mitochondrial matrix (0.4%) plasma membrane (0.4%)" "deaminase activity (42.3%) 2-iminobutanoate deaminase activity (1.1%) 2-iminopropanoate deaminase activity (1.1%)" "IPR006175 (24.7%) IPR035959 (24.7%) IPR006056 (23.7%)" "YjgF/YER057c/UK114 family (24.7%) RutC-like superfamily (24.7%) RidA family (23.7%)" GLTPIMGFDVWEHSYYLDYQNRR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0004784 (50%) GO:0046872 (50%)" "superoxide dismutase activity (50%) metal ion binding (50%)" "IPR001189 (16.7%) IPR019831 (16.7%) IPR019832 (16.7%)" "Manganese/iron superoxide dismutase (16.7%) Manganese/iron superoxide dismutase, N-terminal (16.7%) Manganese/iron superoxide dismutase, C-terminal (16.7%)" YGNTYEYRPLIEETEYKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0045892 (50%) GO:0003677 (50%) negative regulation of DNA-templated transcription (50%) DNA binding (50%) "IPR005650 (33.3%) IPR036388 (33.3%) IPR036390 (33.3%)" "BlaI transcriptional regulatory family (33.3%) Winged helix-like DNA-binding domain superfamily (33.3%) Winged helix DNA-binding domain superfamily (33.3%)" IVGVNQVPIVWKDVDREYVQQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.1.11 (100%) glycogen(starch) synthase (100%) GO:0009103 (50%) "GO:0016757 (35.7%) GO:0004373 (14.3%)" lipopolysaccharide biosynthetic process (50%) "glycosyltransferase activity (35.7%) alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (14.3%)" "IPR001296 (50%) IPR028098 (50%)" "Glycosyl transferase, family 1 (50%) Glycosyltransferase subfamily 4-like, N-terminal domain (50%)" IYLTAAGGIAPTVCR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.8.3.- (95.7%) 3.1.2.1 (4.3%)" "CoA-transferases (95.7%) acetyl-CoA hydrolase (4.3%)" "GO:0006083 (24.8%) GO:0006084 (24.8%)" "GO:0003986 (24.8%) GO:0008775 (24.8%) GO:0016740 (0.3%)" "acetate metabolic process (24.8%) acetyl-CoA metabolic process (24.8%)" "acetyl-CoA hydrolase activity (24.8%) acetate CoA-transferase activity (24.8%) transferase activity (0.3%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" TVGQLLKEHNAEVTGFIR root GO:0006414 (0.5%) "GO:0005737 (46.8%) GO:0005739 (0.5%) GO:0005829 (0.5%)" "GO:0003746 (49.8%) GO:0005085 (0.5%) GO:0008270 (0.5%)" translational elongation (0.5%) "cytoplasm (46.8%) mitochondrion (0.5%) cytosol (0.5%)" "translation elongation factor activity (49.8%) guanyl-nucleotide exchange factor activity (0.5%) zinc ion binding (0.5%)" "IPR001816 (20.6%) IPR014039 (20.6%) IPR036402 (20.6%)" "Translation elongation factor EFTs/EF1B (20.6%) Translation elongation factor EFTs/EF1B, dimerisation (20.6%) Elongation factor Ts, dimerisation domain superfamily (20.6%)" IAPLIIEMGCFAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.1.3.1 (40%) 6.4.1.1 (40%) 4.1.1.112 (13.3%)" "methylmalonyl-CoA carboxytransferase (40%) pyruvate carboxylase (40%) oxaloacetate decarboxylase (13.3%)" GO:0006094 (13.3%) "GO:0005737 (13.3%) GO:0016020 (0.7%)" "GO:0003824 (48.7%) GO:0004736 (15.3%) GO:0047154 (4.7%)" gluconeogenesis (13.3%) "cytoplasm (13.3%) membrane (0.7%)" "catalytic activity (48.7%) pyruvate carboxylase activity (15.3%) methylmalonyl-CoA carboxytransferase activity (4.7%)" "IPR000891 (24.7%) IPR013785 (24.7%) IPR003379 (23.7%)" "Pyruvate carboxyltransferase (24.7%) Aldolase-type TIM barrel (24.7%) Carboxylase, conserved domain (23.7%)" MFVGTAAKEDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.9%) GO:0008615 (19.9%)" GO:0005737 (19.9%) "GO:0004648 (19.9%) GO:0030170 (19.9%) GO:0008483 (0.7%)" "L-serine biosynthetic process (19.9%) pyridoxine biosynthetic process (19.9%)" cytoplasm (19.9%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.9%) pyridoxal phosphate binding (19.9%) transaminase activity (0.7%)" "IPR000192 (19.8%) IPR015421 (19.8%) IPR015422 (19.8%)" "Aminotransferase class V domain (19.8%) Pyridoxal phosphate-dependent transferase, major domain (19.8%) Pyridoxal phosphate-dependent transferase, small domain (19.8%)" VREYLEAELKNTDLGEYVSQVLIPTEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006353 (20%) GO:0006354 (20%) GO:0031564 (20%)" GO:0005829 (20%) "DNA-templated transcription termination (20%) DNA-templated transcription elongation (20%) transcription antitermination (20%)" cytosol (20%) "IPR001062 (12.5%) IPR005824 (12.5%) IPR006645 (12.5%)" "Transcription antitermination protein, NusG (12.5%) KOW (12.5%) NusG-like, N-terminal (12.5%)" YVSFDTQSDENSGATPSTPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.11.4 (100%) tripeptide aminopeptidase (100%) "GO:0006508 (16.3%) GO:0043171 (16.3%)" GO:0005829 (17.5%) "GO:0045148 (17.5%) GO:0008237 (16.3%) GO:0008270 (16.3%)" "proteolysis (16.3%) peptide catabolic process (16.3%)" cytosol (17.5%) "tripeptide aminopeptidase activity (17.5%) metallopeptidase activity (16.3%) zinc ion binding (16.3%)" "IPR001261 (21.2%) IPR002933 (19.7%) IPR010161 (19.7%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (21.2%) Peptidase M20 (19.7%) Peptidase M20B, tripeptide aminopeptidase (19.7%)" MENLNWSELGFGYIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.42 (100%) branched-chain-amino-acid transaminase (100%) "GO:0008652 (14.3%) GO:0009082 (14.3%) GO:0009097 (14.3%)" GO:0004084 (28.6%) "amino acid biosynthetic process (14.3%) branched-chain amino acid biosynthetic process (14.3%) isoleucine biosynthetic process (14.3%)" branched-chain-amino-acid transaminase activity (28.6%) "IPR001544 (16.7%) IPR005786 (16.7%) IPR033939 (16.7%)" "Aminotransferase class IV (16.7%) Branched-chain amino acid aminotransferase II (16.7%) Branched-chain aminotransferase (16.7%)" IADIDMTVSPSSK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000297 (25%) IPR027304 (25%) IPR046357 (25%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (25%) Trigger factor/SurA domain superfamily (25%) Peptidyl-prolyl cis-trans isomerase domain superfamily (25%)" ADVQELSEDEWEVVRR Bacteria Bacteria 3.1.-.- (100%) Acting on ester bonds (100%) "GO:0004521 (52%) GO:0016787 (48%)" "RNA endonuclease activity (52%) hydrolase activity (48%)" "IPR005229 (34.2%) IPR013527 (34.2%) IPR013551 (31.6%)" "Endoribonuclease YicC/YloC-like (34.2%) Endoribonuclease YicC-like, N-terminal (34.2%) Endoribonuclease YicC-like, C-terminal (31.6%)" DLNADMISKEENSR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" KDRVDDALHATR root "5.6.1.7 (100%) 2.3.1.41 (0%)" "chaperonin ATPase (100%) beta-ketoacyl-[acyl-carrier-protein] synthase I (0%)" "GO:0042026 (16.9%) GO:0009408 (0%) GO:0051085 (0%)" "GO:0005737 (16.3%) GO:1990220 (0%)" "GO:0005524 (16.9%) GO:0140662 (16.9%) GO:0016853 (16.7%)" "protein refolding (16.9%) response to heat (0%) obsolete chaperone cofactor-dependent protein refolding (0%)" "cytoplasm (16.3%) GroEL-GroES complex (0%)" "ATP binding (16.9%) ATP-dependent protein folding chaperone (16.9%) isomerase activity (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR027409 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) GroEL-like apical domain superfamily (16.7%)" AQYQPLMDLLNEKGAETSIEDRR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" DMQFQPVTDEILHMDFLEVSKDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" LQNVPTSPR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR001063 (24.9%) IPR005727 (24.9%) IPR047867 (24.9%)" "Large ribosomal subunit protein uL22 (24.9%) Large ribosomal subunit protein uL22, bacterial/chloroplast-type (24.9%) Large ribosomal subunit protein uL22, bacteria/organella (24.9%)" ISVSTPIAQGLMGKK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0006354 (20%) GO:0032784 (20%)" "GO:0003677 (20%) GO:0003746 (20%) GO:0070063 (20%)" "DNA-templated transcription elongation (20%) regulation of DNA-templated transcription elongation (20%)" "DNA binding (20%) translation elongation factor activity (20%) RNA polymerase binding (20%)" "IPR001437 (12.5%) IPR006359 (12.5%) IPR018151 (12.5%)" "Transcription elongation factor, GreA/GreB, C-terminal (12.5%) Transcription elongation factor GreA (12.5%) Transcription elongation factor, GreA/GreB, conserved site (12.5%)" GDIVFVNAGEDKGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR003256 (16.9%) IPR005824 (16.9%) IPR008991 (16.9%)" "Large ribosomal subunit protein uL24 (16.9%) KOW (16.9%) Translation protein SH3-like domain superfamily (16.9%)" SFQDFLQLDTPPEKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.6%) GO:0006508 (1%)" GO:0000428 (19.6%) "GO:0003677 (19.6%) GO:0003899 (19.6%) GO:0032549 (19.5%)" "DNA-templated transcription (19.6%) proteolysis (1%)" DNA-directed RNA polymerase complex (19.6%) "DNA binding (19.6%) DNA-directed RNA polymerase activity (19.6%) ribonucleoside binding (19.5%)" "IPR007644 (7.9%) IPR007642 (7.9%) IPR015712 (7.9%)" "RNA polymerase, beta subunit, protrusion (7.9%) RNA polymerase Rpb2, domain 2 (7.9%) DNA-directed RNA polymerase, subunit 2 (7.9%)" DSMFNTPPVLPIYAALQTLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20%) GO:0008615 (20%)" GO:0005737 (20%) "GO:0004648 (20%) GO:0030170 (20%)" "L-serine biosynthetic process (20%) pyridoxine biosynthetic process (20%)" cytoplasm (20%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (20%)" "IPR000192 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase class V domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" VNSVPNSEVQNVFR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50%) GO:0046872 (50%)" "alkaline phosphatase activity (50%) metal ion binding (50%)" "IPR001952 (50%) IPR017850 (50%)" "Alkaline phosphatase (50%) Alkaline-phosphatase-like, core domain superfamily (50%)" ITIPGFYDDVEDVSPAER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.4.13.- (50%) 3.5.1.- (50%)" "Dipeptidases (50%) In linear amides (50%)" "GO:0046872 (50%) GO:0016787 (40%) GO:0016805 (10%)" "metal ion binding (50%) hydrolase activity (40%) dipeptidase activity (10%)" "IPR002933 (33.3%) IPR011650 (33.3%) IPR051458 (33.3%)" "Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%) Cytosolic and Metallo Dipeptidase (33.3%)" YLEENGFEIISSEFVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (33.3%) GO:0005829 (33.3%) GO:0003677 (33.3%) regulation of DNA-templated transcription (33.3%) cytosol (33.3%) DNA binding (33.3%) "IPR002876 (17.4%) IPR026564 (17.4%) IPR029072 (17.4%)" "Transcriptional regulator TACO1-like (17.4%) Transcriptional regulator TACO1-like, domain 3 (17.4%) YebC-like (17.4%)" VGMEVGPTPELKPWKEFLALK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (12%) GO:0044210 (12%)" "GO:0005829 (12%) GO:0097268 (12%)" "GO:0003883 (12%) GO:0005524 (12%) GO:0042802 (12%)" "pyrimidine nucleobase biosynthetic process (12%) 'de novo' CTP biosynthetic process (12%)" "cytosol (12%) cytoophidium (12%)" "CTP synthase activity (12%) ATP binding (12%) identical protein binding (12%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" DNTTIVNGAGAKENIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.9%) GO:0005737 (16.3%) "GO:0005524 (16.9%) GO:0016853 (16.9%) GO:0140662 (16.9%)" protein refolding (16.9%) cytoplasm (16.3%) "ATP binding (16.9%) isomerase activity (16.9%) ATP-dependent protein folding chaperone (16.9%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR027409 (16.8%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like apical domain superfamily (16.8%)" AQGYTYQGTNAKNPQVLHDER Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR011990 (51.4%) IPR041662 (48.6%)" "Tetratricopeptide-like helical domain superfamily (51.4%) SusD-like 2 (48.6%)" DLLPLVEGCTVSTK root "3.4.25.2 (55.6%) 3.4.21.- (40.7%) 2.8.1.7 (1.2%)" "HslU--HslV peptidase (55.6%) Serine endopeptidases (40.7%) cysteine desulfurase (1.2%)" "GO:0051603 (14.4%) GO:0043335 (13.7%) GO:0006508 (0.1%)" "GO:0009376 (14.5%) GO:0005839 (0%) GO:0005829 (0%)" "GO:0005524 (14.5%) GO:0016887 (14.5%) GO:0008233 (14.4%)" "proteolysis involved in protein catabolic process (14.4%) protein unfolding (13.7%) proteolysis (0.1%)" "HslUV protease complex (14.5%) proteasome core complex (0%) cytosol (0%)" "ATP binding (14.5%) ATP hydrolysis activity (14.5%) peptidase activity (14.4%)" "IPR003959 (16.7%) IPR027417 (16.7%) IPR050052 (16.7%)" "ATPase, AAA-type, core (16.7%) P-loop containing nucleoside triphosphate hydrolase (16.7%) ATP-dependent Clp protease ATP-binding subunit ClpX (16.7%)" IGNRFDLVLVAAR root "2.7.7.6 (99.8%) 2.7.6.5 (0.1%) 5.6.2.4 (0.1%)" "DNA-directed RNA polymerase (99.8%) GTP diphosphokinase (0.1%) DNA 3'-5' helicase (0.1%)" "GO:0006351 (24.5%) GO:0006352 (0.1%) GO:0006281 (0%)" "GO:0000428 (24.9%) GO:0000345 (0.1%) GO:0005829 (0%)" "GO:0003677 (24.7%) GO:0003899 (24.7%) GO:0016779 (0.2%)" "DNA-templated transcription (24.5%) DNA-templated transcription initiation (0.1%) DNA repair (0%)" "DNA-directed RNA polymerase complex (24.9%) cytosolic DNA-directed RNA polymerase complex (0.1%) cytosol (0%)" "DNA binding (24.7%) DNA-directed RNA polymerase activity (24.7%) nucleotidyltransferase activity (0.2%)" "IPR003716 (33%) IPR006110 (33%) IPR036161 (33%)" "DNA-directed RNA polymerase, omega subunit (33%) RNA polymerase, subunit omega/Rpo6/RPB6 (33%) RPB6/omega subunit-like superfamily (33%)" MTTVHAATATQK root "1.2.1.- (83%) 1.2.1.12 (17%)" "With NAD(+) or NADP(+) as acceptor (83%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (17%)" "GO:0006096 (16.1%) GO:0006006 (15%) GO:0019682 (0.4%)" "GO:0005737 (14.6%) GO:0005829 (1.4%) GO:0005634 (0.1%)" "GO:0051287 (18.6%) GO:0050661 (15%) GO:0004365 (10.5%)" "glycolytic process (16.1%) glucose metabolic process (15%) glyceraldehyde-3-phosphate metabolic process (0.4%)" "cytoplasm (14.6%) cytosol (1.4%) nucleus (0.1%)" "NAD binding (18.6%) NADP binding (15%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (10.5%)" "IPR020829 (17.3%) IPR020831 (17.3%) IPR036291 (17.2%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.3%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.3%) NAD(P)-binding domain superfamily (17.2%)" DVTDGKLSYEGSTGPNAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) HNFNAGPSILPR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (20.1%) GO:0008615 (18.8%)" "GO:0005737 (20.1%) GO:0016020 (0.2%)" "GO:0004648 (20.3%) GO:0030170 (20.1%) GO:0008483 (0.3%)" "L-serine biosynthetic process (20.1%) pyridoxine biosynthetic process (18.8%)" "cytoplasm (20.1%) membrane (0.2%)" "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20.3%) pyridoxal phosphate binding (20.1%) transaminase activity (0.3%)" "IPR000192 (20.1%) IPR015424 (20.1%) IPR022278 (20.1%)" "Aminotransferase class V domain (20.1%) Pyridoxal phosphate-dependent transferase (20.1%) Phosphoserine aminotransferase (20.1%)" YLLDQGYHVIPVSPK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.5.1.49 (100%) O-acetylhomoserine aminocarboxypropyltransferase (100%) "GO:0005737 (33.3%) GO:0005829 (33.3%)" GO:0016740 (33.3%) "cytoplasm (33.3%) cytosol (33.3%)" transferase activity (33.3%) "IPR003781 (50%) IPR036291 (50%)" "CoA-binding (50%) NAD(P)-binding domain superfamily (50%)" IVELELTAEEKELFAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25%) GO:0006099 (25%)" "GO:0004459 (25%) GO:0030060 (25%)" "lactate metabolic process (25%) tricarboxylic acid cycle (25%)" "L-lactate dehydrogenase (NAD+) activity (25%) L-malate dehydrogenase (NAD+) activity (25%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR011275 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 3 (16.7%)" AADKADSQALSPIYLIQAGQLFEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0016020 (100%) membrane (100%) "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" GWDSNWYGGNDYGDALLEDSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.5%) GO:0022627 (20.5%) "GO:0003735 (20.5%) GO:0019843 (20.5%) GO:0003729 (17.9%)" translation (20.5%) cytosolic small ribosomal subunit (20.5%) "structural constituent of ribosome (20.5%) rRNA binding (20.5%) mRNA binding (17.9%)" "IPR001351 (11.3%) IPR004044 (11.3%) IPR004087 (11.3%)" "Small ribosomal subunit protein uS3, C-terminal (11.3%) K Homology domain, type 2 (11.3%) K Homology domain (11.3%)" TLLTQVAPPGVTAHVVDVAK root "2.7.1.191 (98.2%) 2.7.1.- (1.2%) 2.7.1.69 (0.6%)" "protein-N(pi)-phosphohistidine--D-mannose phosphotransferase (98.2%) Phosphotransferases with an alcohol group as acceptor (1.2%) Transferred entry: 2.7.1.191, 2.7.1.192, 2.7.1.193, 2.7.1.194, 2.7.1.1952.7.1.196, 2.7.1.197, 2.7.1.198, 2.7.1.199, 2.7.1.200, 2.7.1.2012.7.1.202, 2.7.1.203, 2.7.1.204, 2.7.1.205, 2.7.1.206, 2.7.1.207 an2.7.1.208 (0.6%)" "GO:0009401 (20.1%) GO:0015761 (0%) GO:0015764 (0%)" "GO:0005737 (20.1%) GO:0005886 (19.1%) GO:0016020 (0.1%)" "GO:0008982 (20.1%) GO:0016301 (20.1%) GO:0016740 (0.1%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (20.1%) mannose transmembrane transport (0%) N-acetylglucosamine transport (0%)" "cytoplasm (20.1%) plasma membrane (19.1%) membrane (0.1%)" "protein-N(PI)-phosphohistidine-sugar phosphotransferase activity (20.1%) kinase activity (20.1%) transferase activity (0.1%)" "IPR004720 (12.9%) IPR036667 (12.9%) IPR018455 (12.7%)" "Phosphotransferase system, sorbose subfamily IIB component (12.9%) Phosphotransferase system, sorbose subfamily IIB component superfamily (12.9%) Phosphotransferase system, sorbose subfamily IIB component, subgroup (12.7%)" SVYELVLEHGILNKEELDTILSPENMLKPVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.3%) IPR008948 (14.3%) IPR018951 (14.3%)" "Fumarate lyase family (14.3%) L-Aspartase-like (14.3%) Fumarase C, C-terminal (14.3%)" HTPGNTVSNLSSTR Bacteroidota Bacteria Pseudomonadati Bacteroidota "5.4.2.10 (77.3%) 5.4.2.2 (13.4%) 5.4.2.8 (9.3%)" "phosphoglucosamine mutase (77.3%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (13.4%) phosphomannomutase (9.3%)" "GO:0005975 (14.3%) GO:0006048 (14%) GO:0009252 (14%)" GO:0005829 (14%) "GO:0004615 (14%) GO:0008966 (14%) GO:0000287 (13.8%)" "carbohydrate metabolic process (14.3%) UDP-N-acetylglucosamine biosynthetic process (14%) peptidoglycan biosynthetic process (14%)" cytosol (14%) "phosphomannomutase activity (14%) phosphoglucosamine mutase activity (14%) magnesium ion binding (13.8%)" "IPR016055 (10.2%) IPR005845 (10.1%) IPR005846 (10.1%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (10.2%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (10.1%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (10.1%)" ATDASVPFADNMAAIYAATR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" ALQAIAGPFSQVR root "4.1.2.14 (50.6%) 4.1.3.42 (46%) 4.1.3.16 (3.3%)" "2-dehydro-3-deoxy-phosphogluconate aldolase (50.6%) (4S)-4-hydroxy-2-oxoglutarate aldolase (46%) 4-hydroxy-2-oxoglutarate aldolase (3.3%)" "GO:0009255 (0.2%) GO:0009082 (0.1%) GO:0019521 (0.1%)" "GO:0005737 (32.7%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0008700 (26.9%) GO:0008675 (26.6%) GO:0016829 (8%)" "Entner-Doudoroff pathway through 6-phosphogluconate (0.2%) branched-chain amino acid biosynthetic process (0.1%) D-gluconate metabolic process (0.1%)" "cytoplasm (32.7%) cytosol (0.1%) membrane (0.1%)" "(R,S)-4-hydroxy-2-oxoglutarate aldolase activity (26.9%) 2-dehydro-3-deoxy-phosphogluconate aldolase activity (26.6%) lyase activity (8%)" "IPR000887 (25.1%) IPR013785 (25.1%) IPR031338 (24.9%)" "KDPG/KHG aldolase (25.1%) Aldolase-type TIM barrel (25.1%) KDPG/KHG aldolase, active site 2 (24.9%)" MNKAELINAMAAESGLSKVDSKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" NSDIQPTVESLKGK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (48.6%) GO:1903810 (0.5%)" "GO:0030288 (49%) GO:0016020 (0.5%) GO:0055052 (0.5%)" "GO:0016597 (0.5%) GO:0016787 (0.5%)" "amino acid transport (48.6%) L-histidine import across plasma membrane (0.5%)" "outer membrane-bounded periplasmic space (49%) membrane (0.5%) ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing (0.5%)" "amino acid binding (0.5%) hydrolase activity (0.5%)" "IPR001638 (35.1%) IPR018313 (33.4%) IPR005768 (31.5%)" "Solute-binding protein family 3/N-terminal domain of MltF (35.1%) Solute-binding protein family 3, conserved site (33.4%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (31.5%)" FGIPMFYGGPSAAFFATKDDYKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" DSSAQVYPFVTLAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005975 (64.7%) GO:0016787 (35.3%) carbohydrate metabolic process (64.7%) hydrolase activity (35.3%) "IPR008313 (33.3%) IPR008928 (33.3%) IPR012341 (33.3%)" "Metal-independent alpha-mannosidase (33.3%) Six-hairpin glycosidase superfamily (33.3%) Six-hairpin glycosidase-like superfamily (33.3%)" QELNQTDQWIEIPEEVREMYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.20 (100%) tryptophan synthase (100%) GO:0005737 (25%) "GO:0004834 (25%) GO:0030170 (25%) GO:0052684 (25%)" cytoplasm (25%) "tryptophan synthase activity (25%) pyridoxal phosphate binding (25%) L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity (25%)" "IPR001926 (20%) IPR006316 (20%) IPR006653 (20%)" "Tryptophan synthase beta chain-like, PALP domain (20%) Tryptophan synthase, beta chain-like (20%) Tryptophan synthase, beta chain, conserved site (20%)" IVDDEADVQETAIASTEDTGQKVEVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0015031 (16.7%) GO:0015891 (16.7%) GO:0055085 (16.7%)" "GO:0030288 (16.7%) GO:0098797 (16.7%)" GO:0031992 (16.7%) "protein transport (16.7%) siderophore transport (16.7%) transmembrane transport (16.7%)" "outer membrane-bounded periplasmic space (16.7%) plasma membrane protein complex (16.7%)" energy transducer activity (16.7%) "IPR003538 (25%) IPR006260 (25%) IPR037682 (25%)" "Gram-negative bacterial TonB protein (25%) TonB/TolA, C-terminal (25%) TonB, C-terminal (25%)" YDTAIILNQPSLEKFESR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.7.1 (66.7%) 1.2.7.3 (33.3%)" "pyruvate synthase (66.7%) 2-oxoglutarate synthase (33.3%)" "GO:0016903 (80%) GO:0019164 (12%) GO:0047553 (8%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (80%) pyruvate synthase activity (12%) 2-oxoglutarate synthase activity (8%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" SFMVNAINETLKEEFRR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.2.4.4 (100%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (100%) "GO:0007584 (33.3%) GO:0009083 (33.3%)" "GO:0016624 (27.5%) GO:0003863 (5.8%)" "response to nutrient (33.3%) branched-chain amino acid catabolic process (33.3%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (27.5%) branched-chain 2-oxo acid dehydrogenase activity (5.8%)" "IPR001017 (20%) IPR005475 (20%) IPR009014 (20%)" "Dehydrogenase, E1 component (20%) Transketolase-like, pyrimidine-binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%)" KQGTTQIIVSAKENDVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" ILDNAEAGDNVGLLLR EAEGQDFQLYPGELGK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales GO:0034599 (32.2%) GO:0005829 (32.2%) "GO:0005506 (32.4%) GO:0016787 (3.1%)" cellular response to oxidative stress (32.2%) cytosol (32.2%) "iron ion binding (32.4%) hydrolase activity (3.1%)" "IPR007457 (50%) IPR036766 (50%)" "Fe(II) trafficking protein YggX (50%) Fe(II) trafficking protein YggX superfamily (50%)" AMLHFCENPGK root "GO:0006355 (20%) GO:0000160 (0.3%) GO:0045892 (0%)" "GO:0005829 (19.7%) GO:0032993 (19.7%) GO:0005737 (0%)" "GO:0000156 (19.7%) GO:0000976 (19.7%) GO:0003677 (0.3%)" "regulation of DNA-templated transcription (20%) phosphorelay signal transduction system (0.3%) negative regulation of DNA-templated transcription (0%)" "cytosol (19.7%) protein-DNA complex (19.7%) cytoplasm (0%)" "phosphorelay response regulator activity (19.7%) transcription cis-regulatory region binding (19.7%) DNA binding (0.3%)" "IPR001867 (16.7%) IPR016032 (16.7%) IPR036388 (16.7%)" "OmpR/PhoB-type DNA-binding domain (16.7%) Signal transduction response regulator, C-terminal effector (16.7%) Winged helix-like DNA-binding domain superfamily (16.7%)" NYSLPLGAHVVKDNGDVVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" ATDAVIGGEGNGGVIYPASHYGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.2.10 (100%) phosphoglucosamine mutase (100%) "GO:0005975 (14.3%) GO:0006048 (14.3%) GO:0009252 (14.3%)" GO:0005829 (14.3%) "GO:0000287 (14.3%) GO:0004615 (14.3%) GO:0008966 (14.3%)" "carbohydrate metabolic process (14.3%) UDP-N-acetylglucosamine biosynthetic process (14.3%) peptidoglycan biosynthetic process (14.3%)" cytosol (14.3%) "magnesium ion binding (14.3%) phosphomannomutase activity (14.3%) phosphoglucosamine mutase activity (14.3%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" ACAEAGVFLISPFVGR root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (24.7%) GO:0009052 (0.1%)" "GO:0005829 (24.9%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0004801 (25%) GO:0016740 (0.2%) GO:0016744 (0%)" "carbohydrate metabolic process (25%) pentose-phosphate shunt (24.7%) pentose-phosphate shunt, non-oxidative branch (0.1%)" "cytosol (24.9%) cytoplasm (0.1%) membrane (0%)" "transaldolase activity (25%) transferase activity (0.2%) transketolase or transaldolase activity (0%)" "IPR001585 (25.1%) IPR013785 (25.1%) IPR018225 (25%)" "Transaldolase/Fructose-6-phosphate aldolase (25.1%) Aldolase-type TIM barrel (25.1%) Transaldolase, active site (25%)" LGISWQDFIDMGRENPGSNEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" WTMIDNHTWDMIIGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.3.1 (50%) 6.4.1.1 (35.7%) 4.1.1.112 (7.1%)" "methylmalonyl-CoA carboxytransferase (50%) pyruvate carboxylase (35.7%) oxaloacetate decarboxylase (7.1%)" GO:0006094 (15.6%) GO:0005737 (15.6%) "GO:0003824 (39%) GO:0004736 (18.8%) GO:0047154 (7.3%)" gluconeogenesis (15.6%) cytoplasm (15.6%) "catalytic activity (39%) pyruvate carboxylase activity (18.8%) methylmalonyl-CoA carboxytransferase activity (7.3%)" "IPR003379 (24.6%) IPR013785 (24.6%) IPR000891 (24.3%)" "Carboxylase, conserved domain (24.6%) Aldolase-type TIM barrel (24.6%) Pyruvate carboxyltransferase (24.3%)" HLDVIEGVIEDKEVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.7.2.4 (55.6%) 1.1.1.3 (44.4%)" "aspartate kinase (55.6%) homoserine dehydrogenase (44.4%)" "GO:0009086 (11.1%) GO:0009088 (11.1%) GO:0009089 (11.1%)" "GO:0004072 (11.1%) GO:0004412 (11.1%) GO:0005524 (11.1%)" "methionine biosynthetic process (11.1%) threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%)" "aspartate kinase activity (11.1%) homoserine dehydrogenase activity (11.1%) ATP binding (11.1%)" "IPR001048 (7.1%) IPR001341 (7.1%) IPR001342 (7.1%)" "Aspartate/glutamate/uridylate kinase (7.1%) Aspartate kinase (7.1%) Homoserine dehydrogenase, catalytic (7.1%)" AYSLKEAASLVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (17%) GO:0006417 (15.6%)" "GO:0015934 (17%) GO:0005840 (0.3%) GO:1990904 (0.3%)" "GO:0003735 (17%) GO:0019843 (17%) GO:0000049 (15.6%)" "translation (17%) regulation of translation (15.6%)" "large ribosomal subunit (17%) ribosome (0.3%) ribonucleoprotein complex (0.3%)" "structural constituent of ribosome (17%) rRNA binding (17%) tRNA binding (15.6%)" "IPR016095 (16.8%) IPR023673 (16.8%) IPR023674 (16.8%)" "Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.8%) Large ribosomal subunit protein uL1, conserved site (16.8%) Ribosomal protein uL1-like (16.8%)" VDAAIEESVIAHMNELLIALSDDAELSREDR root GO:0005829 (100%) cytosol (100%) IPR019671 (100%) Protein of unknown function DUF2526 (100%) FVTDLNQPVSVYMTPK root 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (20.5%) GO:0006177 (19.5%) GO:0009411 (0%)" "GO:0005737 (0%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0003938 (20.6%) GO:0046872 (19.8%) GO:0000166 (18.9%)" "GTP biosynthetic process (20.5%) GMP biosynthetic process (19.5%) response to UV (0%)" "cytoplasm (0%) cytosol (0%) plasma membrane (0%)" "IMP dehydrogenase activity (20.6%) metal ion binding (19.8%) nucleotide binding (18.9%)" "IPR000644 (16.9%) IPR013785 (16.9%) IPR005990 (16.8%)" "CBS domain (16.9%) Aldolase-type TIM barrel (16.9%) Inosine-5'-monophosphate dehydrogenase (16.8%)" GITEPTPTFSACFGAAFLSLHPTKYGEELVK root 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.4%) GO:0005829 (18.4%) "GO:0004612 (18.4%) GO:0005524 (18.4%) GO:0046872 (15.9%)" gluconeogenesis (18.4%) cytosol (18.4%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.4%) ATP binding (18.4%) metal ion binding (15.9%)" "IPR001272 (26.4%) IPR013035 (26.4%) IPR015994 (23.9%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (26.4%) Phosphoenolpyruvate carboxykinase, C-terminal (26.4%) Phosphoenolpyruvate carboxykinase (ATP), conserved site (23.9%)" IVGNPAQETTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006950 (16.7%) "GO:0000287 (16.7%) GO:0004743 (16.7%) GO:0005524 (16.7%)" response to stress (16.7%) "magnesium ion binding (16.7%) pyruvate kinase activity (16.7%) ATP binding (16.7%)" "IPR001697 (11.1%) IPR011037 (11.1%) IPR015793 (11.1%)" "Pyruvate kinase (11.1%) Pyruvate kinase-like, insert domain superfamily (11.1%) Pyruvate kinase, barrel (11.1%)" LVPTKEELFPNTK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0006353 (25%) GO:0031564 (25%)" GO:0005829 (25%) GO:0003723 (25%) "DNA-templated transcription termination (25%) transcription antitermination (25%)" cytosol (25%) RNA binding (25%) "IPR006027 (33.3%) IPR011605 (33.3%) IPR035926 (33.3%)" "NusB/RsmB/TIM44 (33.3%) NusB antitermination factor (33.3%) NusB-like superfamily (33.3%)" VVVVAGYGDVGK root "3.13.2.1 (89.7%) 3.3.1.1 (10.3%)" "adenosylhomocysteinase (89.7%) Transferred entry: 3.13.2.1 (10.3%)" "GO:0006730 (20.4%) GO:0033353 (20.4%) GO:0071269 (18.2%)" GO:0005829 (20.4%) GO:0004013 (20.4%) "one-carbon metabolic process (20.4%) S-adenosylmethionine cycle (20.4%) L-homocysteine biosynthetic process (18.2%)" cytosol (20.4%) adenosylhomocysteinase activity (20.4%) "IPR000043 (20%) IPR015878 (20%) IPR036291 (20%)" "Adenosylhomocysteinase-like (20%) S-adenosyl-L-homocysteine hydrolase, NAD binding domain (20%) NAD(P)-binding domain superfamily (20%)" ITTEFKGTSTKFENDDWNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006811 (25%) "GO:0009279 (25%) GO:0046930 (25%)" GO:0015288 (25%) monoatomic ion transport (25%) "cell outer membrane (25%) pore complex (25%)" porin activity (25%) "IPR006664 (19.4%) IPR006665 (19.4%) IPR011250 (19.4%)" "Outer membrane protein, bacterial (19.4%) OmpA-like domain (19.4%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (19.4%)" KMSGTVGVER Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (33.3%) "GO:0022625 (33.3%) GO:1990904 (0.1%)" GO:0003735 (33.4%) translation (33.3%) "cytosolic large ribosomal subunit (33.3%) ribonucleoprotein complex (0.1%)" structural constituent of ribosome (33.4%) "IPR001857 (29.3%) IPR008991 (29.3%) IPR038657 (29.3%)" "Large ribosomal subunit protein bL19 (29.3%) Translation protein SH3-like domain superfamily (29.3%) Large ribosomal subunit protein bL19 superfamily (29.3%)" MGLNFTACAPK Bacillota Bacteria Bacillati Bacillota 2.1.3.3 (100%) ornithine carbamoyltransferase (100%) "GO:0019240 (20.1%) GO:0042450 (20.1%)" GO:0005737 (19.4%) "GO:0004585 (20.1%) GO:0016597 (20.1%)" "citrulline biosynthetic process (20.1%) L-arginine biosynthetic process via ornithine (20.1%)" cytoplasm (19.4%) "ornithine carbamoyltransferase activity (20.1%) amino acid binding (20.1%)" "IPR002292 (16.7%) IPR006130 (16.7%) IPR006131 (16.7%)" "Ornithine/putrescine carbamoyltransferase (16.7%) Aspartate/ornithine carbamoyltransferase (16.7%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (16.7%)" ANPIEQVVHFPITK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006004 (25%) GO:0016139 (25%)" GO:0005764 (25%) GO:0004560 (25%) "fucose metabolic process (25%) glycoside catabolic process (25%)" lysosome (25%) alpha-L-fucosidase activity (25%) "IPR000421 (20%) IPR000933 (20%) IPR008979 (20%)" "Coagulation factor 5/8, C-terminal domain (20%) Glycoside hydrolase, family 29 (20%) Galactose-binding-like domain superfamily (20%)" VQNASYQVAAYLADEIAK root 4.1.1.15 (100%) glutamate decarboxylase (100%) "GO:0006538 (21.2%) GO:0051454 (14.8%)" "GO:0005829 (21.2%) GO:0016020 (0.1%)" "GO:0004351 (21.2%) GO:0030170 (21.2%) GO:0016829 (0.4%)" "L-glutamate catabolic process (21.2%) intracellular pH elevation (14.8%)" "cytosol (21.2%) membrane (0.1%)" "glutamate decarboxylase activity (21.2%) pyridoxal phosphate binding (21.2%) lyase activity (0.4%)" "IPR010107 (20.7%) IPR015424 (20.7%) IPR002129 (20.5%)" "Glutamate decarboxylase (20.7%) Pyridoxal phosphate-dependent transferase (20.7%) Pyridoxal phosphate-dependent decarboxylase (20.5%)" GAQEAHEAIRPTYMENETVNGTGQEQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.6.2.1 (100%) DNA topoisomerase (100%) GO:0006265 (25.6%) "GO:0003677 (25.6%) GO:0003917 (25.6%) GO:0046872 (23.3%)" DNA topological change (25.6%) "DNA binding (25.6%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25.6%) metal ion binding (23.3%)" "IPR000380 (7.4%) IPR003602 (7.4%) IPR013497 (7.4%)" "DNA topoisomerase, type IA (7.4%) DNA topoisomerase, type IA, DNA-binding domain (7.4%) DNA topoisomerase, type IA, central (7.4%)" NLNMNFELSDEMK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006865 (33.2%) GO:0015813 (0.1%) GO:0070778 (0.1%)" "GO:0005576 (33.2%) GO:0030288 (33.2%) GO:0016020 (0.1%)" "GO:0016595 (0.1%) GO:0070335 (0.1%)" "amino acid transport (33.2%) L-glutamate transmembrane transport (0.1%) L-aspartate transmembrane transport (0.1%)" "extracellular region (33.2%) outer membrane-bounded periplasmic space (33.2%) membrane (0.1%)" "glutamate binding (0.1%) aspartate binding (0.1%)" "IPR051455 (50.1%) IPR001638 (49.9%)" "Bacterial solute-binding protein 3 (50.1%) Solute-binding protein family 3/N-terminal domain of MltF (49.9%)" KLKEIDEVVKEDLE Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis DSFAVLGAELSQMDGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016740 (100%) transferase activity (100%) IPR029044 (100%) Nucleotide-diphospho-sugar transferases (100%) EIPADLDIEKFEAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.15.5 (100%) peptidyl-dipeptidase Dcp (100%) GO:0006508 (19.2%) GO:0005829 (19.2%) "GO:0004180 (19.2%) GO:0004222 (19.2%) GO:0046872 (19.2%)" proteolysis (19.2%) cytosol (19.2%) "carboxypeptidase activity (19.2%) metalloendopeptidase activity (19.2%) metal ion binding (19.2%)" "IPR001567 (20%) IPR024077 (20%) IPR024079 (20%)" "Peptidase M3A/M3B catalytic domain (20%) Neurolysin/Thimet oligopeptidase, domain 2 (20%) Metallopeptidase, catalytic domain superfamily (20%)" ILGMNITFVTSAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (17.2%) "GO:0005840 (17.2%) GO:1990904 (17.2%)" "GO:0003735 (17.2%) GO:0000049 (15.6%) GO:0019843 (15.6%)" translation (17.2%) "ribosome (17.2%) ribonucleoprotein complex (17.2%)" "structural constituent of ribosome (17.2%) tRNA binding (15.6%) rRNA binding (15.6%)" "IPR002132 (20%) IPR020930 (20%) IPR022803 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5, bacteria (20%) Large ribosomal subunit protein uL5 domain superfamily (20%)" YQQIADFTDGKDYTTCDIAK Jilunia laotingensis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Jilunia Jilunia laotingensis GO:0006879 (20%) GO:0005829 (20%) "GO:0004322 (20%) GO:0008199 (20%) GO:0020037 (20%)" intracellular iron ion homeostasis (20%) cytosol (20%) "ferroxidase activity (20%) ferric iron binding (20%) heme binding (20%)" "IPR008331 (20%) IPR009040 (20%) IPR009078 (20%)" "Ferritin/DPS domain (20%) Ferritin-like diiron domain (20%) Ferritin-like superfamily (20%)" AVPIAEAMLAIVLMDHLLR root "4.2.3.5 (99.9%) 2.1.1.298 (0.1%)" "chorismate synthase (99.9%) ribosomal protein uL3 N(5)-glutamine methyltransferase (0.1%)" "GO:0008652 (16.6%) GO:0009073 (16.6%) GO:0009423 (16.6%)" "GO:0005829 (16.6%) GO:0005886 (0%) GO:0042597 (0%)" "GO:0004107 (16.6%) GO:0010181 (16.6%) GO:0016829 (0.2%)" "amino acid biosynthetic process (16.6%) aromatic amino acid family biosynthetic process (16.6%) chorismate biosynthetic process (16.6%)" "cytosol (16.6%) plasma membrane (0%) periplasmic space (0%)" "chorismate synthase activity (16.6%) FMN binding (16.6%) lyase activity (0.2%)" "IPR000453 (33.2%) IPR020541 (33.2%) IPR035904 (33.2%)" "Chorismate synthase (33.2%) Chorismate synthase, conserved site (33.2%) Chorismate synthase AroC superfamily (33.2%)" LQQEKLEINKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" MCPSGALSYK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR010693 (100%) Divergent 4Fe-4S mono-cluster (100%) ISDEQLDQAIANIAK Pseudomonadati Bacteria Pseudomonadati 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (13.9%) GO:0043165 (13.9%) GO:0050821 (13.9%)" "GO:0030288 (13.9%) GO:0042597 (0.7%)" "GO:0003755 (15.3%) GO:0042277 (13.9%) GO:0051082 (13.9%)" "protein folding (13.9%) Gram-negative-bacterium-type cell outer membrane assembly (13.9%) protein stabilization (13.9%)" "outer membrane-bounded periplasmic space (13.9%) periplasmic space (0.7%)" "peptidyl-prolyl cis-trans isomerase activity (15.3%) peptide binding (13.9%) unfolded protein binding (13.9%)" "IPR015391 (14.8%) IPR027304 (14.8%) IPR050280 (14.8%)" "SurA N-terminal (14.8%) Trigger factor/SurA domain superfamily (14.8%) Outer Membrane Protein Chaperone SurA (14.8%)" MDLVPRNELRTGDVGYIISGIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.6.5.0 (100%) Unknown (100%) GO:0045727 (16.7%) GO:0005886 (16.7%) "GO:0003746 (16.7%) GO:0003924 (16.7%) GO:0005525 (16.7%)" positive regulation of translation (16.7%) plasma membrane (16.7%) "translation elongation factor activity (16.7%) GTPase activity (16.7%) GTP binding (16.7%)" "IPR000640 (10%) IPR000795 (10%) IPR004161 (10%)" "Elongation factor EFG, domain V-like (10%) Translational (tr)-type GTP-binding domain (10%) Translation elongation factor EFTu-like, domain 2 (10%)" LYCHEVTSPQAFAGLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.33 (100%) 3-isopropylmalate dehydratase (100%) GO:0009098 (24.8%) "GO:0046872 (24.8%) GO:0051539 (24.8%) GO:0003861 (24.4%)" L-leucine biosynthetic process (24.8%) "metal ion binding (24.8%) 4 iron, 4 sulfur cluster binding (24.8%) 3-isopropylmalate dehydratase activity (24.4%)" "IPR001030 (14.4%) IPR015931 (14.4%) IPR036008 (14.4%)" "Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (14.4%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (14.4%) Aconitase, iron-sulfur domain (14.4%)" DYADIDNAPEEKER root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0070125 (3.8%) "GO:0005829 (15.4%) GO:0005739 (3.8%)" "GO:0003746 (19.2%) GO:0003924 (19.2%) GO:0005525 (19.2%)" mitochondrial translational elongation (3.8%) "cytosol (15.4%) mitochondrion (3.8%)" "translation elongation factor activity (19.2%) GTPase activity (19.2%) GTP binding (19.2%)" "IPR000795 (8.5%) IPR004160 (8.5%) IPR004161 (8.5%)" "Translational (tr)-type GTP-binding domain (8.5%) Translation elongation factor EFTu/EF1A, C-terminal (8.5%) Translation elongation factor EFTu-like, domain 2 (8.5%)" LFEMEVPEINDGLITIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006353 (19.6%) GO:0031564 (19.6%)" GO:0005829 (19.6%) "GO:0003723 (19.6%) GO:0003700 (19.4%) GO:0003746 (2.3%)" "DNA-templated transcription termination (19.6%) transcription antitermination (19.6%)" cytosol (19.6%) "RNA binding (19.6%) DNA-binding transcription factor activity (19.4%) translation elongation factor activity (2.3%)" "IPR009019 (12.5%) IPR010213 (12.5%) IPR012340 (12.5%)" "K homology domain superfamily, prokaryotic type (12.5%) Transcription factor NusA (12.5%) Nucleic acid-binding, OB-fold (12.5%)" QLDPLVVGQEHYDTAR root "7.1.2.2 (97%) 3.6.3.14 (2.7%) 3.6.1.15 (0.2%)" "H(+)-transporting two-sector ATPase (97%) Transferred entry: 7.1.2.2 (2.7%) nucleoside-triphosphate phosphatase (0.2%)" GO:0042777 (0%) "GO:0045259 (23.5%) GO:0005886 (22.5%) GO:0016020 (0%)" "GO:0005524 (23.5%) GO:0046933 (23.5%) GO:0016787 (5.2%)" proton motive force-driven plasma membrane ATP synthesis (0%) "proton-transporting ATP synthase complex (23.5%) plasma membrane (22.5%) membrane (0%)" "ATP binding (23.5%) proton-transporting ATP synthase activity, rotational mechanism (23.5%) hydrolase activity (5.2%)" "IPR050053 (10.1%) IPR020003 (10.1%) IPR027417 (10.1%)" "ATPase alpha/beta chains (10.1%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (10.1%) P-loop containing nucleoside triphosphate hydrolase (10.1%)" LAEVSSNIIDQCVAQGVPFAR Pseudomonadati Bacteria Pseudomonadati 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (16.3%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (16.3%)" "IPR003953 (14.4%) IPR011280 (14.4%) IPR027477 (14.4%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.4%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.4%) Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily (14.4%)" AIIDNNVLGTKAEQEAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.4.14.- (100%) Dipeptidyl-peptidases and tripeptidyl-peptidases (100%) "GO:0006508 (25%) GO:0043171 (25%)" "GO:0008239 (25%) GO:0070009 (25%)" "proteolysis (25%) peptide catabolic process (25%)" "dipeptidyl-peptidase activity (25%) serine-type aminopeptidase activity (25%)" "IPR009003 (33.3%) IPR019500 (33.3%) IPR043504 (33.3%)" "Peptidase S1, PA clan (33.3%) Peptidase S46 (33.3%) Peptidase S1, PA clan, chymotrypsin-like fold (33.3%)" LGANAILGVSLAVAK root "4.2.1.11 (99.9%) 1.2.4.1 (0%) 1.3.1.70 (0%)" "phosphopyruvate hydratase (99.9%) pyruvate dehydrogenase (acetyl-transferring) (0%) Delta(14)-sterol reductase (0%)" "GO:0006096 (18.8%) GO:0001732 (0%) GO:0006397 (0%)" "GO:0000015 (18.8%) GO:0005576 (12.4%) GO:0009986 (12.1%)" "GO:0000287 (18.8%) GO:0004634 (18.8%) GO:0016829 (0%)" "glycolytic process (18.8%) formation of cytoplasmic translation initiation complex (0%) mRNA processing (0%)" "phosphopyruvate hydratase complex (18.8%) extracellular region (12.4%) cell surface (12.1%)" "magnesium ion binding (18.8%) phosphopyruvate hydratase activity (18.8%) lyase activity (0%)" "IPR000941 (16.9%) IPR020811 (16.9%) IPR020810 (16.9%)" "Enolase (16.9%) Enolase, N-terminal (16.9%) Enolase, C-terminal TIM barrel domain (16.9%)" MNVPFQLADSALDKLFLEESFAAGLHALK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.9%) GO:0008615 (19.6%) GO:0006563 (0.1%)" "GO:0005737 (19.9%) GO:0005829 (0.1%)" "GO:0004648 (20%) GO:0030170 (19.9%) GO:0008483 (0.3%)" "L-serine biosynthetic process (19.9%) pyridoxine biosynthetic process (19.6%) L-serine metabolic process (0.1%)" "cytoplasm (19.9%) cytosol (0.1%)" "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (20%) pyridoxal phosphate binding (19.9%) transaminase activity (0.3%)" "IPR015422 (17%) IPR015424 (16.9%) IPR022278 (16.9%)" "Pyridoxal phosphate-dependent transferase, small domain (17%) Pyridoxal phosphate-dependent transferase (16.9%) Phosphoserine aminotransferase (16.9%)" QIYAQVIDDTTGK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR004389 (33.8%) IPR005484 (33.8%) IPR057268 (32.5%)" "Large ribosomal subunit protein uL18, bacteria (33.8%) Large ribosomal subunit protein uL18, bacterial/plantae/animalia (33.8%) Large ribosomal subunit protein uL18 (32.5%)" VENGVLADVAPSILHILGMPQPADMTGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (20.2%) GO:0006096 (19.2%)" GO:0005829 (20.2%) "GO:0004619 (20.2%) GO:0030145 (20.2%)" "glucose catabolic process (20.2%) glycolytic process (19.2%)" cytosol (20.2%) "phosphoglycerate mutase activity (20.2%) manganese ion binding (20.2%)" "IPR005995 (20.4%) IPR006124 (20.4%) IPR017850 (20.4%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.4%) Metalloenzyme (20.4%) Alkaline-phosphatase-like, core domain superfamily (20.4%)" IETGVIHVGDEIEILGLGEDKKSVVTGVEMFRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20.4%) "GO:0003746 (20.4%) GO:0003924 (20.4%) GO:0005525 (20.4%)" cytosol (20.4%) "translation elongation factor activity (20.4%) GTPase activity (20.4%) GTP binding (20.4%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" LGIQAFQPHMIEGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.1%) GO:0000428 (17.1%) "GO:0003677 (17.1%) GO:0003899 (17.1%) GO:0000287 (15.4%)" DNA-templated transcription (17.1%) DNA-directed RNA polymerase complex (17.1%) "DNA binding (17.1%) DNA-directed RNA polymerase activity (17.1%) magnesium ion binding (15.4%)" "IPR000722 (9.3%) IPR006592 (9.3%) IPR007066 (9.3%)" "RNA polymerase, alpha subunit (9.3%) RNA polymerase, N-terminal (9.3%) RNA polymerase Rpb1, domain 3 (9.3%)" AKELGLDAIHDTVHEMCKDEAR Bacteria Bacteria 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (47.9%) GO:0016491 (21%) GO:0004601 (19.2%)" "iron ion binding (47.9%) oxidoreductase activity (21%) peroxidase activity (19.2%)" "IPR009078 (13.2%) IPR052773 (13.2%) IPR012347 (12.9%)" "Ferritin-like superfamily (13.2%) Anaerobic Bacterial Peroxidase-Related (13.2%) Ferritin-like (12.9%)" GATVLPHGTGR root "GO:0006417 (16.7%) GO:0006412 (16.5%) GO:0000027 (0%)" "GO:0022625 (16.7%) GO:0005840 (0.2%) GO:0000428 (0%)" "GO:0000049 (16.6%) GO:0003735 (16.5%) GO:0019843 (16.5%)" "regulation of translation (16.7%) translation (16.5%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (16.7%) ribosome (0.2%) DNA-directed RNA polymerase complex (0%)" "tRNA binding (16.6%) structural constituent of ribosome (16.5%) rRNA binding (16.5%)" "IPR028364 (16.8%) IPR023674 (16.8%) IPR016095 (16.6%)" "Ribosomal protein uL1/ribosomal biogenesis protein (16.8%) Ribosomal protein uL1-like (16.8%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.6%)" NIFLTDEQWENERK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033103 (50%) GO:0033104 (50%) protein secretion by the type VI secretion system (50%) type VI protein secretion system complex (50%) IPR035576 (100%) Type VI secretion system TssC (100%) VSYPIYHIKNIVEPVSK Pseudomonadati Bacteria Pseudomonadati 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (16.7%) GO:0005829 (16.7%) "GO:0004612 (16.7%) GO:0005524 (16.7%) GO:0016301 (16.7%)" gluconeogenesis (16.7%) cytosol (16.7%) "phosphoenolpyruvate carboxykinase (ATP) activity (16.7%) ATP binding (16.7%) kinase activity (16.7%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" VLVQGLKDLGLMK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0030145 (25%) GO:0070006 (25%)" proteolysis (25%) cytosol (25%) "manganese ion binding (25%) metalloaminopeptidase activity (25%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" GSNSNVDYALSGLTHYVMAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) "IPR004155 (25%) IPR010496 (25%) IPR011989 (25%)" "PBS lyase HEAT-like repeat (25%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (25%) Armadillo-like helical (25%)" IADDFSNDAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" MLANPDKTDLIEAFYK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.- (50%) 5.4.2.2 (50%)" "Phosphotransferases (phosphomutases) (50%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (50%)" "GO:0005975 (24%) GO:0006166 (24%)" "GO:0000287 (24%) GO:0008973 (24%) GO:0004614 (4%)" "carbohydrate metabolic process (24%) purine ribonucleoside salvage (24%)" "magnesium ion binding (24%) phosphopentomutase activity (24%) phosphoglucomutase activity (4%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" ADACSHYGVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.7%) GO:0009328 (16.7%) "GO:0000049 (16.8%) GO:0004826 (16.8%) GO:0000287 (16.5%)" phenylalanyl-tRNA aminoacylation (16.7%) phenylalanine-tRNA ligase complex (16.7%) "tRNA binding (16.8%) phenylalanine-tRNA ligase activity (16.8%) magnesium ion binding (16.5%)" "IPR002547 (7.8%) IPR012340 (7.8%) IPR033714 (7.8%)" "tRNA-binding domain (7.8%) Nucleic acid-binding, OB-fold (7.8%) Phenylalanly tRNA synthetase, tRNA-binding-domain (7.8%)" ISHASLQPGGQAPVAPSALSAGTR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "1.3.1.- (50.5%) 1.-.-.- (49.5%)" "With NAD(+) or NADP(+) as acceptor (50.5%) Oxidoreductases (49.5%)" "GO:0006805 (0.2%) GO:0018937 (0.2%) GO:0046256 (0.2%)" GO:0005829 (32.5%) "GO:0010181 (32.5%) GO:0016628 (30.3%) GO:0016491 (3.6%)" "xenobiotic metabolic process (0.2%) nitroglycerin metabolic process (0.2%) 2,4,6-trinitrotoluene catabolic process (0.2%)" cytosol (32.5%) "FMN binding (32.5%) oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (30.3%) oxidoreductase activity (3.6%)" "IPR013785 (33.5%) IPR001155 (33.3%) IPR045247 (33.3%)" "Aldolase-type TIM barrel (33.5%) NADH:flavin oxidoreductase/NADH oxidase, N-terminal (33.3%) Oxidoreductase Oye-like (33.3%)" VVNIASYQVSPNDVVSIREK root "GO:0042274 (19.7%) GO:0006412 (19.6%) GO:0006353 (0.1%)" "GO:0015935 (19.8%) GO:0005840 (0.4%) GO:0005737 (0%)" "GO:0019843 (19.8%) GO:0003735 (19.8%) GO:0016787 (0.3%)" "ribosomal small subunit biogenesis (19.7%) translation (19.6%) DNA-templated transcription termination (0.1%)" "small ribosomal subunit (19.8%) ribosome (0.4%) cytoplasm (0%)" "rRNA binding (19.8%) structural constituent of ribosome (19.8%) hydrolase activity (0.3%)" "IPR036986 (16.7%) IPR002942 (16.7%) IPR022801 (16.7%)" "RNA-binding S4 domain superfamily (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4 (16.7%)" WILFPLKDVKPIQER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006298 (16.7%) GO:0005829 (16.7%) "GO:0003684 (16.7%) GO:0005524 (16.7%) GO:0030983 (16.7%)" mismatch repair (16.7%) cytosol (16.7%) "damaged DNA binding (16.7%) ATP binding (16.7%) mismatched DNA binding (16.7%)" "IPR000432 (8.3%) IPR005748 (8.3%) IPR007695 (8.3%)" "DNA mismatch repair protein MutS, C-terminal (8.3%) DNA mismatch repair protein MutS (8.3%) DNA mismatch repair protein MutS-like, N-terminal (8.3%)" QLGEDPWVAIAK root "GO:0006412 (24.8%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (24.6%) GO:0005840 (0.5%) GO:1990904 (0.2%)" "GO:0003735 (24.8%) GO:0003729 (24.8%) GO:0016491 (0.1%)" "translation (24.8%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.6%) ribosome (0.5%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (24.8%) mRNA binding (24.8%) oxidoreductase activity (0.1%)" "IPR003029 (20.1%) IPR012340 (20.1%) IPR050437 (20.1%)" "S1 domain (20.1%) Nucleic acid-binding, OB-fold (20.1%) Small ribosomal subunit protein bS1-like (20.1%)" EVGGKKITFLDTPGHEAFTAMR Massilimicrobiota timonensis Bacteria Bacillati Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Massilimicrobiota Massilimicrobiota timonensis GO:0005829 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytosol (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (9.1%) IPR000795 (9.1%) IPR005225 (9.1%)" "Translation initiation factor IF-2, bacterial-like (9.1%) Translational (tr)-type GTP-binding domain (9.1%) Small GTP-binding domain (9.1%)" QIQVYAEDAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (58.1%) "GO:0016853 (27.9%) GO:0003755 (14%)" plasma membrane (58.1%) "isomerase activity (27.9%) peptidyl-prolyl cis-trans isomerase activity (14%)" "IPR027304 (45.5%) IPR052029 (45.5%) IPR046357 (9.1%)" "Trigger factor/SurA domain superfamily (45.5%) Periplasmic chaperone PpiD (45.5%) Peptidyl-prolyl cis-trans isomerase domain superfamily (9.1%)" VQGTEGLWMNDGDHVYVQGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "3.2.1.49 (75%) 3.2.1.- (25%)" "alpha-N-acetylgalactosaminidase (75%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (25%)" "GO:0000166 (50%) GO:0016798 (42.3%) GO:0008456 (7.7%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (42.3%) alpha-N-acetylgalactosaminidase activity (7.7%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" MGAPCIGINDSGGAR Bacteria Bacteria "4.1.1.41 (36.4%) 6.-.-.- (27.3%) 6.4.1.3 (27.3%)" "Transferred entry: 7.2.4.3 (36.4%) Ligases (27.3%) propionyl-CoA carboxylase (27.3%)" "GO:0015977 (21.3%) GO:0006633 (0.8%)" GO:0009317 (21.8%) "GO:0004658 (22.9%) GO:0003989 (21.8%) GO:0016740 (10.2%)" "carbon fixation (21.3%) fatty acid biosynthetic process (0.8%)" acetyl-CoA carboxylase complex (21.8%) "propionyl-CoA carboxylase activity (22.9%) acetyl-CoA carboxylase activity (21.8%) transferase activity (10.2%)" "IPR011762 (19.9%) IPR029045 (19.9%) IPR034733 (19.9%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (19.9%) ClpP/crotonase-like domain superfamily (19.9%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (19.9%)" LMANIEAALEKGDVEAAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0017038 (50%) GO:0005886 (50%) protein import (50%) plasma membrane (50%) "IPR002898 (50%) IPR050790 (50%)" "MotA/TolQ/ExbB proton channel (50%) ExbB/TolQ Biopolymer Transport (50%)" EVAAAEDPKACAAEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.-.-.- (100%) Ligases (100%) GO:0015977 (23.3%) GO:0009317 (23.3%) "GO:0003989 (23.3%) GO:0004658 (23.3%) GO:0016740 (6.7%)" carbon fixation (23.3%) acetyl-CoA carboxylase complex (23.3%) "acetyl-CoA carboxylase activity (23.3%) propionyl-CoA carboxylase activity (23.3%) transferase activity (6.7%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" LQELHKEIEDTQK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0034605 (20%) GO:0042026 (20%)" GO:0005737 (20%) "GO:0005524 (20%) GO:0016887 (20%)" "cellular response to heat (20%) protein refolding (20%)" cytoplasm (20%) "ATP binding (20%) ATP hydrolysis activity (20%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" HIGIQEEDLPVMLEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" MENNDLLEMVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (23.9%) GO:0006166 (23.9%)" "GO:0000287 (23.9%) GO:0008973 (23.9%) GO:0004614 (4.3%)" "carbohydrate metabolic process (23.9%) purine ribonucleoside salvage (23.9%)" "magnesium ion binding (23.9%) phosphopentomutase activity (23.9%) phosphoglucomutase activity (4.3%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" FTDFINYEIVETYKDFGGIRNEEDYLITETGAR Bacteroides ovatus Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides ovatus 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (26.1%) GO:0005829 (26.1%) "GO:0030145 (21.7%) GO:0070006 (21.7%) GO:0004177 (4.3%)" proteolysis (26.1%) cytosol (26.1%) "manganese ion binding (21.7%) metalloaminopeptidase activity (21.7%) aminopeptidase activity (4.3%)" "IPR000994 (21.4%) IPR036005 (21.4%) IPR052433 (21.4%)" "Peptidase M24 (21.4%) Creatinase/aminopeptidase-like (21.4%) Xaa-Pro dipeptidase-like (21.4%)" TITIQQIKDVAQEAYNLYKDNTDGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" SQQVTDACKK root "4.2.1.2 (99.7%) 5.3.2.2 (0.3%) 4.2.1.81 (0.1%)" "fumarate hydratase (99.7%) oxaloacetate tautomerase (0.3%) D(-)-tartrate dehydratase (0.1%)" "GO:0006099 (19.9%) GO:0006106 (0.1%) GO:0006108 (0%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0004333 (20.1%) GO:0046872 (19.9%) GO:0051539 (19.9%)" "tricarboxylic acid cycle (19.9%) fumarate metabolic process (0.1%) malate metabolic process (0%)" "cytosol (0%) membrane (0%)" "fumarate hydratase activity (20.1%) metal ion binding (19.9%) 4 iron, 4 sulfur cluster binding (19.9%)" "IPR004647 (16.9%) IPR051208 (16.9%) IPR036660 (16.9%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.9%) Class-I Fumarase/Tartrate Dehydratase (16.9%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (16.9%)" RLLIGDDEHGWDNEGVFNYEGGCYAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.5%) GO:0005829 (17.5%) "GO:0004612 (17.5%) GO:0005524 (17.5%) GO:0046872 (17.5%)" gluconeogenesis (17.5%) cytosol (17.5%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.5%) ATP binding (17.5%) metal ion binding (17.5%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" VTDGIITYVGENR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.2.7 (100%) imidazolonepropionase (100%) "GO:0019556 (16.9%) GO:0019557 (16.2%)" GO:0005737 (16.9%) "GO:0050480 (16.9%) GO:0005506 (16.2%) GO:0008270 (16.2%)" "L-histidine catabolic process to glutamate and formamide (16.9%) L-histidine catabolic process to glutamate and formate (16.2%)" cytoplasm (16.9%) "imidazolonepropionase activity (16.9%) iron ion binding (16.2%) zinc ion binding (16.2%)" "IPR005920 (25.3%) IPR011059 (25.3%) IPR032466 (25.3%)" "Imidazolonepropionase (25.3%) Metal-dependent hydrolase, composite domain superfamily (25.3%) Metal-dependent hydrolase (25.3%)" AGYNQVADMKEVNPQK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.5%) GO:0005829 (16.5%) "GO:0000049 (16.5%) GO:0000287 (16.5%) GO:0004824 (16.5%)" lysyl-tRNA aminoacylation (16.5%) cytosol (16.5%) "tRNA binding (16.5%) magnesium ion binding (16.5%) lysine-tRNA ligase activity (16.5%)" "IPR002313 (11.1%) IPR004364 (11.1%) IPR004365 (11.1%)" "Lysine-tRNA ligase, class II (11.1%) Aminoacyl-tRNA synthetase, class II (D/K/N) (11.1%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.1%)" LLNQLLDAYTPTAHKEYEAVQELAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "3.4.15.5 (66.7%) 3.4.24.70 (33.3%)" "peptidyl-dipeptidase Dcp (66.7%) oligopeptidase A (33.3%)" GO:0006508 (19.6%) GO:0005829 (19.6%) "GO:0004180 (19.6%) GO:0004222 (19.6%) GO:0046872 (19.6%)" proteolysis (19.6%) cytosol (19.6%) "carboxypeptidase activity (19.6%) metalloendopeptidase activity (19.6%) metal ion binding (19.6%)" "IPR001567 (16.7%) IPR024077 (16.7%) IPR024079 (16.7%)" "Peptidase M3A/M3B catalytic domain (16.7%) Neurolysin/Thimet oligopeptidase, domain 2 (16.7%) Metallopeptidase, catalytic domain superfamily (16.7%)" VADKATEVKEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016020 (100%) membrane (100%) ACEGIDVIIHAAAIK Pseudomonadati Bacteria Pseudomonadati "4.2.1.115 (86.2%) 4.2.1.- (13.8%)" "UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (86.2%) Hydro-lyases (13.8%)" GO:0016829 (100%) lyase activity (100%) "IPR003869 (25.2%) IPR036291 (25.2%) IPR051203 (25.2%)" "Polysaccharide biosynthesis protein, CapD-like domain (25.2%) NAD(P)-binding domain superfamily (25.2%) Polysaccharide Synthase-Related Protein (25.2%)" GNPNWIATTPR root "4.1.1.12 (73%) 2.6.1.1 (15.7%) 2.6.1.- (11.2%)" "aspartate 4-decarboxylase (73%) aspartate transaminase (15.7%) Transaminases (11.2%)" "GO:0006520 (25.8%) GO:0006531 (1.8%)" "GO:0030170 (27.6%) GO:0008483 (25.5%) GO:0047688 (13.6%)" "amino acid metabolic process (25.8%) aspartate metabolic process (1.8%)" "pyridoxal phosphate binding (27.6%) transaminase activity (25.5%) aspartate 4-decarboxylase activity (13.6%)" "IPR004839 (16.3%) IPR015421 (16.3%) IPR015422 (16.3%)" "Aminotransferase, class I/classII, large domain (16.3%) Pyridoxal phosphate-dependent transferase, major domain (16.3%) Pyridoxal phosphate-dependent transferase, small domain (16.3%)" EGFYDNTIFHR root 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (33.8%) "GO:0005737 (30.5%) GO:0071013 (0.7%) GO:0005634 (0.1%)" "GO:0003755 (34.4%) GO:0016853 (0.4%)" protein folding (33.8%) "cytoplasm (30.5%) catalytic step 2 spliceosome (0.7%) nucleus (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (34.4%) isomerase activity (0.4%)" "IPR002130 (20.4%) IPR029000 (20.4%) IPR020892 (20.1%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (20.4%) Cyclophilin-like domain superfamily (20.4%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (20.1%)" VSEHGAELSSIVANATGKEYLWQADPAFWKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005975 (33.3%) "GO:0016853 (33.3%) GO:0030246 (33.3%)" carbohydrate metabolic process (33.3%) "isomerase activity (33.3%) carbohydrate binding (33.3%)" "IPR008183 (25%) IPR011013 (25%) IPR014718 (25%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (25%) Galactose mutarotase-like domain superfamily (25%) Glycoside hydrolase-type carbohydrate-binding (25%)" LSDEVTDSPMVDK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0009252 (49.3%) "GO:0009279 (49.3%) GO:0016020 (0.4%)" "GO:0016787 (0.4%) GO:0030674 (0.4%)" peptidoglycan biosynthetic process (49.3%) "cell outer membrane (49.3%) membrane (0.4%)" "hydrolase activity (0.4%) protein-macromolecule adaptor activity (0.4%)" "IPR010583 (95%) IPR011250 (5%)" "MltA-interacting MipA (95%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (5%)" IIAQGNAPLNDDGTFIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.8%) IPR007121 (7.8%) IPR007645 (7.8%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.8%) RNA polymerase, beta subunit, conserved site (7.8%) RNA polymerase Rpb2, domain 3 (7.8%)" TQKDLDKLSNGLAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0032790 (20.5%) GO:0006412 (0.5%)" GO:0005737 (18.4%) "GO:0005525 (20.5%) GO:0003746 (20%) GO:0003924 (20%)" "ribosome disassembly (20.5%) translation (0.5%)" cytoplasm (18.4%) "GTP binding (20.5%) translation elongation factor activity (20%) GTPase activity (20%)" "IPR004161 (6.4%) IPR009000 (6.4%) IPR009022 (6.4%)" "Translation elongation factor EFTu-like, domain 2 (6.4%) Translation protein, beta-barrel domain superfamily (6.4%) Elongation factor G, domain III (6.4%)" AVDYLGEAVTLSPNRTEIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" DEFAGQNTNPSTVSKPNVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR024302 (47.5%) IPR041662 (2.5%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (47.5%) SusD-like 2 (2.5%)" RYPAVNPIDSYSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (21.6%) GO:0046034 (3.6%) GO:1902600 (0.1%)" "GO:0005524 (25.2%) GO:0046961 (25.2%) GO:0046933 (21.6%)" "proton motive force-driven plasma membrane ATP synthesis (21.6%) ATP metabolic process (3.6%) proton transmembrane transport (0.1%)" "ATP binding (25.2%) proton-transporting ATPase activity, rotational mechanism (25.2%) proton-transporting ATP synthase activity, rotational mechanism (21.6%)" "IPR020003 (13.1%) IPR022878 (13.1%) IPR027417 (13.1%)" "ATPase, alpha/beta subunit, nucleotide-binding domain, active site (13.1%) V-type ATP synthase catalytic alpha chain (13.1%) P-loop containing nucleoside triphosphate hydrolase (13.1%)" FDPQREEDFAYSEFPAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.2.1.135 (100%) neopullulanase (100%) GO:0009313 (47.8%) "GO:0004556 (47.8%) GO:0031216 (4.3%)" oligosaccharide catabolic process (47.8%) "alpha-amylase activity (47.8%) neopullulanase activity (4.3%)" "IPR006047 (33.3%) IPR013780 (33.3%) IPR017853 (33.3%)" "Glycosyl hydrolase family 13, catalytic domain (33.3%) Glycosyl hydrolase, all-beta (33.3%) Glycoside hydrolase superfamily (33.3%)" GVTPVHFDSANDGVAAASEAVNLLR root 2.7.1.40 (100%) pyruvate kinase (100%) GO:0006096 (0.2%) "GO:0005737 (0.2%) GO:0005829 (0.2%) GO:1902912 (0.2%)" "GO:0016301 (20.5%) GO:0004743 (20%) GO:0005524 (19.6%)" glycolytic process (0.2%) "cytoplasm (0.2%) cytosol (0.2%) pyruvate kinase complex (0.2%)" "kinase activity (20.5%) pyruvate kinase activity (20%) ATP binding (19.6%)" "IPR015795 (12%) IPR036918 (12%) IPR001697 (11.5%)" "Pyruvate kinase, C-terminal (12%) Pyruvate kinase, C-terminal domain superfamily (12%) Pyruvate kinase (11.5%)" QIESLGISHYPICIAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.4.3 (100%) formate--tetrahydrofolate ligase (100%) GO:0035999 (33.3%) "GO:0004329 (33.3%) GO:0005524 (33.3%)" tetrahydrofolate interconversion (33.3%) "formate-tetrahydrofolate ligase activity (33.3%) ATP binding (33.3%)" "IPR000559 (33.3%) IPR020628 (33.3%) IPR027417 (33.3%)" "Formate-tetrahydrofolate ligase, FTHFS (33.3%) Formate-tetrahydrofolate ligase, FTHFS, conserved site (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%)" RKPILSTVTGGMSGAAVKPIALR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.3.-.- (85.7%) 1.3.1.14 (14.3%)" "Acting on the CH-CH group of donors (85.7%) dihydroorotate dehydrogenase (NAD(+)) (14.3%)" "GO:0006207 (25%) GO:0044205 (25%)" GO:0005737 (25%) GO:0004589 (25%) "'de novo' pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" cytoplasm (25%) dihydroorotate dehydrogenase (NAD+) activity (25%) "IPR001295 (12.5%) IPR005720 (12.5%) IPR012135 (12.5%)" "Dihydroorotate dehydrogenase, conserved site (12.5%) Dihydroorotate dehydrogenase, catalytic (12.5%) Dihydroorotate dehydrogenase, class 1/ 2 (12.5%)" AKSSLYNLFLK Bacteria Bacteria GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" VYGDDAPQAWQK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0015888 (20.9%) GO:0055085 (15.9%) GO:0071934 (0.1%)" "GO:0030288 (20.9%) GO:0016020 (0.3%) GO:0055052 (0.1%)" "GO:0030975 (20.9%) GO:0030976 (20.9%)" "thiamine transport (20.9%) transmembrane transport (15.9%) thiamine transmembrane transport (0.1%)" "outer membrane-bounded periplasmic space (20.9%) membrane (0.3%) ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing (0.1%)" "thiamine binding (20.9%) thiamine pyrophosphate binding (20.9%)" "IPR005948 (27%) IPR005967 (26.6%) IPR006059 (25.7%)" "Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter (27%) Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria (26.6%) Bacterial-type extracellular solute-binding protein (25.7%)" MQMAQDVTSMVLALR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.3%) GO:0005737 (14.1%) "GO:0000049 (14.4%) GO:0004822 (14.4%) GO:0005524 (14.4%)" isoleucyl-tRNA aminoacylation (14.3%) cytoplasm (14.1%) "tRNA binding (14.4%) isoleucine-tRNA ligase activity (14.4%) ATP binding (14.4%)" "IPR013155 (12.6%) IPR023586 (12.6%) IPR033709 (12.6%)" "Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding (12.6%) Isoleucine-tRNA ligase, type 2 (12.6%) Isoleucyl tRNA synthetase type 2, anticodon-binding domain (12.6%)" AVEALDHCVEEVAK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "5.4.2.12 (95.1%) 5.4.2.- (3.3%) 5.4.2.1 (1.6%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (95.1%) Phosphotransferases (phosphomutases) (3.3%) Transferred entry: 5.4.2.11 and 5.4.2.12 (1.6%)" "GO:0006007 (20.1%) GO:0006096 (19%) GO:0005975 (0.2%)" "GO:0005829 (20.1%) GO:0005737 (0.2%)" "GO:0004619 (20.1%) GO:0030145 (20.1%) GO:0016853 (0.2%)" "glucose catabolic process (20.1%) glycolytic process (19%) carbohydrate metabolic process (0.2%)" "cytosol (20.1%) cytoplasm (0.2%)" "phosphoglycerate mutase activity (20.1%) manganese ion binding (20.1%) isomerase activity (0.2%)" "IPR005995 (20.9%) IPR006124 (20.9%) IPR017850 (20.9%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.9%) Metalloenzyme (20.9%) Alkaline-phosphatase-like, core domain superfamily (20.9%)" FILPDSVSAQQIR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" DIEKGILDSELGITPENNGEVIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006415 (33.3%) GO:0005737 (33.3%) GO:0043023 (33.3%) translational termination (33.3%) cytoplasm (33.3%) ribosomal large subunit binding (33.3%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" LEGVALTIGAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000244 (14.3%) IPR009027 (14.3%) IPR020069 (14.3%)" "Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.3%) Large ribosomal subunit protein bL9, C-terminal (14.3%)" GQVLAAPGSVTPHTKFEGEVYVLTKDEGGR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (19.8%) "GO:0003746 (19.8%) GO:0003924 (19.8%) GO:0005525 (19.8%)" cytosol (19.8%) "translation elongation factor activity (19.8%) GTPase activity (19.8%) GTP binding (19.8%)" "IPR000795 (9.8%) IPR004160 (9.8%) IPR004161 (9.8%)" "Translational (tr)-type GTP-binding domain (9.8%) Translation elongation factor EFTu/EF1A, C-terminal (9.8%) Translation elongation factor EFTu-like, domain 2 (9.8%)" SGKGFIEQLEAHCAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.12 (96.7%) 5.4.2.1 (3.3%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (96.7%) Transferred entry: 5.4.2.11 and 5.4.2.12 (3.3%)" "GO:0006007 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004619 (20%) GO:0030145 (20%)" "glucose catabolic process (20%) glycolytic process (20%)" cytosol (20%) "phosphoglycerate mutase activity (20%) manganese ion binding (20%)" "IPR005995 (20%) IPR006124 (20%) IPR011258 (20%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20%) Metalloenzyme (20%) BPG-independent PGAM, N-terminal (20%)" FLVDYAHLDASKMPAQYVEYYQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (61.3%) "GO:0016853 (35.5%) GO:0003755 (3.2%)" plasma membrane (61.3%) "isomerase activity (35.5%) peptidyl-prolyl cis-trans isomerase activity (3.2%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" KVFAEKPAEFDPR Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.8%) GO:0030388 (24.8%) GO:0005975 (0.3%)" "GO:0008270 (25.1%) GO:0004332 (24.8%) GO:0016832 (0.3%)" "glycolytic process (24.8%) fructose 1,6-bisphosphate metabolic process (24.8%) carbohydrate metabolic process (0.3%)" "zinc ion binding (25.1%) fructose-bisphosphate aldolase activity (24.8%) aldehyde-lyase activity (0.3%)" "IPR000771 (25.1%) IPR013785 (25.1%) IPR050246 (25.1%)" "Fructose-bisphosphate aldolase, class-II (25.1%) Aldolase-type TIM barrel (25.1%) Class II Fructose-bisphosphate Aldolase (25.1%)" VKDALHLLTDKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006355 (0.9%) "GO:0003700 (49.6%) GO:0043565 (48.7%) GO:0000976 (0.9%)" regulation of DNA-templated transcription (0.9%) "DNA-binding transcription factor activity (49.6%) sequence-specific DNA binding (48.7%) transcription cis-regulatory region binding (0.9%)" "IPR009057 (50%) IPR018060 (50%)" "Homedomain-like superfamily (50%) AraC-like, DNA binding HTH domain (50%)" YLEMAEGYIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006879 (25%) GO:0005737 (25%) "GO:0008198 (25%) GO:0051537 (25%)" intracellular iron ion homeostasis (25%) cytoplasm (25%) "ferrous iron binding (25%) 2 iron, 2 sulfur cluster binding (25%)" AIVEGINMVSK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (19.9%) GO:0022625 (0.1%)" "GO:0003735 (20%) GO:0019843 (19.6%) GO:0003723 (0.4%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (19.9%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (20%) rRNA binding (19.6%) RNA binding (0.4%)" "IPR003256 (16.5%) IPR008991 (16.5%) IPR014722 (16.5%)" "Large ribosomal subunit protein uL24 (16.5%) Translation protein SH3-like domain superfamily (16.5%) Large ribosomal subunit protein uL2, domain 2 (16.5%)" GADDDKGQAMIQVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.4.13.- (75%) 3.5.1.18 (25%)" "Dipeptidases (75%) succinyl-diaminopimelate desuccinylase (25%)" "GO:0046872 (49.3%) GO:0016787 (35.8%) GO:0016805 (10.4%)" "metal ion binding (49.3%) hydrolase activity (35.8%) dipeptidase activity (10.4%)" "IPR002933 (33.3%) IPR011650 (33.3%) IPR051458 (33.3%)" "Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%) Cytosolic and Metallo Dipeptidase (33.3%)" VSLVPGFISSSTETGEVTNLGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.7.2.4 (55.6%) 1.1.1.3 (44.4%)" "aspartate kinase (55.6%) homoserine dehydrogenase (44.4%)" "GO:0009086 (11.1%) GO:0009088 (11.1%) GO:0009089 (11.1%)" "GO:0004072 (11.1%) GO:0004412 (11.1%) GO:0005524 (11.1%)" "methionine biosynthetic process (11.1%) threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%)" "aspartate kinase activity (11.1%) homoserine dehydrogenase activity (11.1%) ATP binding (11.1%)" "IPR001048 (7.1%) IPR001341 (7.1%) IPR001342 (7.1%)" "Aspartate/glutamate/uridylate kinase (7.1%) Aspartate kinase (7.1%) Homoserine dehydrogenase, catalytic (7.1%)" LAKDDAEKYQTFWQQFGLVLK root "GO:0006457 (0.1%) GO:0006974 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (19.2%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0005524 (19.9%) GO:0016887 (19.9%) GO:0051082 (19.9%)" "protein folding (0.1%) DNA damage response (0.1%) response to heat (0.1%)" "cytoplasm (19.2%) cytosol (0.1%) plasma membrane (0.1%)" "ATP binding (19.9%) ATP hydrolysis activity (19.9%) unfolded protein binding (19.9%)" "IPR001404 (15.1%) IPR020568 (15.1%) IPR020575 (14.3%)" "Heat shock protein Hsp90 family (15.1%) Ribosomal protein uS5 domain 2-type superfamily (15.1%) Heat shock protein Hsp90, N-terminal (14.3%)" VMGLGYPGGPVVNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.234 (100%) N(6)-L-threonylcarbamoyladenine synthase (100%) "GO:0002949 (22.3%) GO:0006508 (5.3%)" GO:0005737 (22.3%) "GO:0005506 (21.8%) GO:0061711 (18.1%) GO:0008233 (5.3%)" "tRNA threonylcarbamoyladenosine modification (22.3%) proteolysis (5.3%)" cytoplasm (22.3%) "iron ion binding (21.8%) tRNA N(6)-L-threonylcarbamoyladenine synthase activity (18.1%) peptidase activity (5.3%)" "IPR000905 (20%) IPR017860 (20%) IPR017861 (20%)" "Gcp-like domain (20%) Peptidase M22, conserved site (20%) Kae1/TsaD family (20%)" VRFAPSPTGALHIGGVR Bacteria Bacteria 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) "GO:0005829 (16.7%) GO:0005737 (0%)" "GO:0004818 (16.7%) GO:0005524 (16.7%) GO:0008270 (16.6%)" glutamyl-tRNA aminoacylation (16.7%) "cytosol (16.7%) cytoplasm (0%)" "glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%) zinc ion binding (16.6%)" "IPR001412 (9.7%) IPR020058 (9.7%) IPR049940 (9.7%)" "Aminoacyl-tRNA synthetase, class I, conserved site (9.7%) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain (9.7%) Glutamyl-Q tRNA(Asp) synthetase/Glutamate--tRNA ligase (9.7%)" IYYPVADNKEPIICILK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "3.4.24.- (50%) 3.4.24.55 (50%)" "Metalloendopeptidases (50%) pitrilysin (50%)" GO:0006508 (33.3%) "GO:0004222 (33.3%) GO:0046872 (33.3%)" proteolysis (33.3%) "metalloendopeptidase activity (33.3%) metal ion binding (33.3%)" "IPR001431 (20%) IPR007863 (20%) IPR011249 (20%)" "Peptidase M16, zinc-binding site (20%) Peptidase M16, C-terminal (20%) Metalloenzyme, LuxS/M16 peptidase-like (20%)" AGYPSGSLGPTTAGR root "4.2.1.2 (99.9%) 4.2.1.81 (0.1%)" "fumarate hydratase (99.9%) D(-)-tartrate dehydratase (0.1%)" "GO:0006099 (19.8%) GO:0006091 (0.1%) GO:0006106 (0%)" GO:0005829 (0.1%) "GO:0004333 (20%) GO:0046872 (20%) GO:0051539 (20%)" "tricarboxylic acid cycle (19.8%) generation of precursor metabolites and energy (0.1%) fumarate metabolic process (0%)" cytosol (0.1%) "fumarate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR004647 (16.9%) IPR051208 (16.9%) IPR036660 (16.9%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.9%) Class-I Fumarase/Tartrate Dehydratase (16.9%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (16.9%)" GILENIIPSSTGAAK root "1.2.1.- (86.3%) 1.2.1.12 (13.7%)" "With NAD(+) or NADP(+) as acceptor (86.3%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (13.7%)" "GO:0006096 (16.6%) GO:0006006 (15.6%)" GO:0005737 (16.6%) "GO:0051287 (17.8%) GO:0050661 (15.6%) GO:0004365 (10.1%)" "glycolytic process (16.6%) glucose metabolic process (15.6%)" cytoplasm (16.6%) "NAD binding (17.8%) NADP binding (15.6%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (10.1%)" "IPR020829 (17.1%) IPR020831 (17.1%) IPR020830 (17%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.1%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.1%) Glyceraldehyde 3-phosphate dehydrogenase, active site (17%)" VGDNYDKIEQVATVSANNDPVIGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (18.9%) GO:0009408 (0.3%) GO:0051085 (0.3%)" "GO:0005737 (12%) GO:1990220 (0.3%)" "GO:0005524 (18.9%) GO:0140662 (18.9%) GO:0016853 (18.3%)" "protein refolding (18.9%) response to heat (0.3%) obsolete chaperone cofactor-dependent protein refolding (0.3%)" "cytoplasm (12%) GroEL-GroES complex (0.3%)" "ATP binding (18.9%) ATP-dependent protein folding chaperone (18.9%) isomerase activity (18.3%)" "IPR001844 (17.6%) IPR002423 (17.6%) IPR027410 (17.6%)" "Chaperonin Cpn60/GroEL (17.6%) Chaperonin Cpn60/GroEL/TCP-1 family (17.6%) TCP-1-like chaperonin intermediate domain superfamily (17.6%)" VVCEVVSPLVKGDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (15.6%) GO:0003723 (1.1%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (15.6%) RNA binding (1.1%)" "IPR001787 (33.3%) IPR028909 (33.3%) IPR036164 (33.3%)" "Large ribosomal subunit protein bL21 (33.3%) Large ribosomal subunit protein bL21-like (33.3%) Large ribosomal subunit protein bL21-like superfamily (33.3%)" LANLLLSEIVGQETKFF Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (25%) GO:0016052 (25%)" GO:0005737 (25%) GO:0004139 (25%) "deoxyribonucleotide catabolic process (25%) carbohydrate catabolic process (25%)" cytoplasm (25%) deoxyribose-phosphate aldolase activity (25%) "IPR002915 (33.3%) IPR011343 (33.3%) IPR013785 (33.3%)" "DeoC/FbaB/LacD aldolase (33.3%) Deoxyribose-phosphate aldolase (33.3%) Aldolase-type TIM barrel (33.3%)" YYVNTYGFHTIHGR root "1.2.7.3 (75%) 1.2.-.- (12.5%) 1.2.7.11 (12.5%)" "2-oxoglutarate synthase (75%) Acting on the aldehyde or oxo group of donors (12.5%) 2-oxoacid oxidoreductase (ferredoxin) (12.5%)" "GO:0044281 (31%) GO:0006979 (1%)" "GO:0030976 (32.9%) GO:0016625 (30%) GO:0047553 (1.9%)" "small molecule metabolic process (31%) response to oxidative stress (1%)" "thiamine pyrophosphate binding (32.9%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (30%) 2-oxoglutarate synthase activity (1.9%)" "IPR011766 (31.4%) IPR029061 (31.4%) IPR051457 (30.5%)" "Thiamine pyrophosphate enzyme, TPP-binding (31.4%) Thiamin diphosphate-binding fold (31.4%) 2-oxoacid:ferredoxin oxidoreductase (30.5%)" LALGQTGSDVHVYHVK Streptococcus Bacteria Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus "GO:0005576 (51.7%) GO:0016020 (48.3%)" "extracellular region (51.7%) membrane (48.3%)" "IPR019931 (13.8%) IPR031792 (12.8%) IPR038183 (12.8%)" "LPXTG cell wall anchor domain (13.8%) Surface antigen, GAG-binding domain (12.8%) RICH domain superfamily (12.8%)" GIENTSGPLGQGHTYAVGAAIAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.2.1.1 (94.5%) 1.2.4.4 (3.6%) 2.2.1.- (1.8%)" "transketolase (94.5%) 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (3.6%) Transketolases and transaldolases (1.8%)" GO:0006098 (24.9%) GO:0005829 (24.9%) "GO:0004802 (24.9%) GO:0046872 (24.4%) GO:0003863 (0.9%)" pentose-phosphate shunt (24.9%) cytosol (24.9%) "transketolase activity (24.9%) metal ion binding (24.4%) branched-chain 2-oxo acid dehydrogenase activity (0.9%)" "IPR005474 (13.3%) IPR029061 (13.3%) IPR033247 (13.3%)" "Transketolase, N-terminal (13.3%) Thiamin diphosphate-binding fold (13.3%) Transketolase family (13.3%)" KMAGQMGNER root "GO:0006412 (24.8%) GO:0000027 (0.1%) GO:0002181 (0.1%)" "GO:0022625 (24.7%) GO:0005840 (0.6%) GO:1990904 (0.1%)" "GO:0003735 (24.8%) GO:0019843 (24.8%)" "translation (24.8%) ribosomal large subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic large ribosomal subunit (24.7%) ribosome (0.6%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.8%) rRNA binding (24.8%)" "IPR009000 (24.9%) IPR019927 (24.9%) IPR000597 (24.9%)" "Translation protein, beta-barrel domain superfamily (24.9%) Large ribosomal subunit protein uL3, bacteria/organella (24.9%) Large ribosomal subunit protein uL3 (24.9%)" FYDDLNTACVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" NKEEGKTASLVPSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR041218 (25%) IPR049280 (25%) IPR049281 (25%)" "Domain of unknown function DUF5606 (25%) Domain of unknown function DUF6852 (25%) BVU_3817-like, C-terminal domain superfamily (25%)" AIEYLNTAIAKDSNNPQLYDVMGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" KAVEDMYSVTVVDVNTINYSGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001014 (25%) IPR012677 (25%) IPR012678 (25%)" "Large ribosomal subunit protein uL23, conserved site (25%) Nucleotide-binding alpha-beta plait domain superfamily (25%) Ribosomal protein uL23/eL15/eS24 core domain superfamily (25%)" FNTLETLVEAIGLPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.2.14 (100%) amidophosphoribosyltransferase (100%) "GO:0009113 (20.2%) GO:0006189 (16%) GO:0006164 (4.2%)" "GO:0004044 (20.2%) GO:0046872 (19.6%) GO:0051536 (19.6%)" "purine nucleobase biosynthetic process (20.2%) 'de novo' IMP biosynthetic process (16%) purine nucleotide biosynthetic process (4.2%)" "amidophosphoribosyltransferase activity (20.2%) metal ion binding (19.6%) iron-sulfur cluster binding (19.6%)" "IPR000836 (20%) IPR005854 (20%) IPR017932 (20%)" "Phosphoribosyltransferase domain (20%) Amidophosphoribosyltransferase (20%) Glutamine amidotransferase type 2 domain (20%)" IIGDNTDKHCQAYFSYDSKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.1 (75.5%) 1.2.7.- (20.4%) 1.2.1.51 (4.1%)" "pyruvate synthase (75.5%) With an iron-sulfur protein as acceptor (20.4%) pyruvate dehydrogenase (NADP(+)) (4.1%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (11.6%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.6%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (11.6%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.6%)" "IPR002869 (7.8%) IPR009014 (7.8%) IPR019752 (7.8%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.8%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (7.8%)" SVGYFVEPTVIQTTDPMFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (25%) GO:0009898 (25%) "GO:0003842 (25%) GO:0004657 (25%)" L-proline catabolic process to L-glutamate (25%) cytoplasmic side of plasma membrane (25%) "L-glutamate gamma-semialdehyde dehydrogenase activity (25%) proline dehydrogenase activity (25%)" "IPR005931 (14.3%) IPR015590 (14.3%) IPR016160 (14.3%)" "Delta-1-pyrroline-5-carboxylate dehydrogenase (14.3%) Aldehyde dehydrogenase domain (14.3%) Aldehyde dehydrogenase, cysteine active site (14.3%)" NFVSLAKDGFYDGLTFHR NPTAEKPFVLGLPTGSSPLGMYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (14.3%) GO:0006043 (14.3%) GO:0006046 (14.3%)" "GO:0005829 (13.7%) GO:0005737 (0.6%)" "GO:0004342 (14.3%) GO:0042802 (14.3%)" "carbohydrate metabolic process (14.3%) glucosamine catabolic process (14.3%) N-acetylglucosamine catabolic process (14.3%)" "cytosol (13.7%) cytoplasm (0.6%)" "glucosamine-6-phosphate deaminase activity (14.3%) identical protein binding (14.3%)" "IPR004547 (25%) IPR006148 (25%) IPR018321 (25%)" "Glucosamine-6-phosphate isomerase (25%) Glucosamine/galactosamine-6-phosphate isomerase (25%) Glucosamine-6-phosphate isomerase, conserved site (25%)" YRDPDYSAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0003700 (50%) GO:0043565 (50%)" "DNA-binding transcription factor activity (50%) sequence-specific DNA binding (50%)" "IPR009057 (50%) IPR018060 (50%)" "Homedomain-like superfamily (50%) AraC-like, DNA binding HTH domain (50%)" GFGFVEIADDAAGAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0003723 (100%) RNA binding (100%) "IPR000504 (22.4%) IPR012677 (22.4%) IPR035979 (22.4%)" "RNA recognition motif domain (22.4%) Nucleotide-binding alpha-beta plait domain superfamily (22.4%) RNA-binding domain superfamily (22.4%)" LAEVYYLNNKFDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0051301 (50%) GO:0009579 (50%) cell division (50%) thylakoid (50%) "IPR011990 (40%) IPR019734 (40%) IPR051685 (20%)" "Tetratricopeptide-like helical domain superfamily (40%) Tetratricopeptide repeat (40%) Ycf3/AcsC/BcsC/TPR Multifunctional (20%)" VHEGDDFTNADRGSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (24.8%) "GO:0003746 (25.5%) GO:0003924 (24.8%) GO:0005525 (24.8%)" ribosome disassembly (24.8%) "translation elongation factor activity (25.5%) GTPase activity (24.8%) GTP binding (24.8%)" "IPR000640 (7.4%) IPR000795 (7.4%) IPR005225 (7.4%)" "Elongation factor EFG, domain V-like (7.4%) Translational (tr)-type GTP-binding domain (7.4%) Small GTP-binding domain (7.4%)" VYTTAPALQFYSGNFLGGTPSR root 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (19.9%) GO:0033499 (19.9%)" GO:0005737 (19.9%) "GO:0004034 (19.9%) GO:0030246 (19.9%) GO:0016853 (0.3%)" "glucose metabolic process (19.9%) galactose catabolic process via UDP-galactose, Leloir pathway (19.9%)" cytoplasm (19.9%) "aldose 1-epimerase activity (19.9%) carbohydrate binding (19.9%) isomerase activity (0.3%)" "IPR008183 (15%) IPR011013 (15%) IPR014718 (15%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (15%) Galactose mutarotase-like domain superfamily (15%) Glycoside hydrolase-type carbohydrate-binding (15%)" VGGANYQVPVEVRPER Bacteria Bacteria "GO:0006412 (19.9%) GO:0000028 (0.1%)" "GO:0015935 (19.8%) GO:0005840 (0.2%) GO:0022627 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.9%) GO:0000049 (19.9%)" "translation (19.9%) ribosomal small subunit assembly (0.1%)" "small ribosomal subunit (19.8%) ribosome (0.2%) cytosolic small ribosomal subunit (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%) tRNA binding (19.9%)" "IPR000235 (20.4%) IPR005717 (20.4%) IPR023798 (20.4%)" "Small ribosomal subunit protein uS7 (20.4%) Small ribosomal subunit protein uS7, bacteria/organella (20.4%) Small ribosomal subunit protein uS7 domain (20.4%)" LMVEQILTDLQK root "5.1.3.2 (99.7%) 5.1.3.7 (0.3%)" "UDP-glucose 4-epimerase (99.7%) UDP-N-acetylglucosamine 4-epimerase (0.3%)" "GO:0006012 (33.1%) GO:0005996 (0.1%) GO:0005975 (0%)" "GO:0005829 (33.1%) GO:0005737 (0%)" "GO:0003978 (33.1%) GO:0016853 (0.3%) GO:0016857 (0%)" "galactose metabolic process (33.1%) monosaccharide metabolic process (0.1%) carbohydrate metabolic process (0%)" "cytosol (33.1%) cytoplasm (0%)" "UDP-glucose 4-epimerase activity (33.1%) isomerase activity (0.3%) racemase and epimerase activity, acting on carbohydrates and derivatives (0%)" "IPR036291 (33.5%) IPR005886 (33.1%) IPR001509 (27.4%)" "NAD(P)-binding domain superfamily (33.5%) UDP-glucose 4-epimerase (33.1%) NAD-dependent epimerase/dehydratase (27.4%)" AVGTADYTMK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001854 (25%) IPR018254 (25%) IPR036049 (25%)" "Large ribosomal subunit protein uL29 (25%) Large ribosomal subunit protein uL29, conserved site (25%) Large ribosomal subunit protein uL29 superfamily (25%)" TQQEIPNAETMK root 2.4.2.3 (100%) uridine phosphorylase (100%) "GO:0009164 (20.1%) GO:0009166 (20.1%) GO:0044206 (17.3%)" "GO:0005829 (20.5%) GO:0032991 (0%)" "GO:0004850 (20.6%) GO:0016757 (0.4%) GO:0003824 (0.2%)" "nucleoside catabolic process (20.1%) nucleotide catabolic process (20.1%) UMP salvage (17.3%)" "cytosol (20.5%) protein-containing complex (0%)" "uridine phosphorylase activity (20.6%) glycosyltransferase activity (0.4%) catalytic activity (0.2%)" "IPR035994 (25.6%) IPR000845 (25%) IPR010058 (24.7%)" "Nucleoside phosphorylase superfamily (25.6%) Nucleoside phosphorylase domain (25%) Uridine phosphorylase (24.7%)" NNSVMFGSLSGTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.4%) GO:0006164 (1.1%)" GO:0005737 (20.4%) "GO:0004642 (20.4%) GO:0005524 (19.4%) GO:0046872 (19.4%)" "'de novo' IMP biosynthetic process (19.4%) purine nucleotide biosynthetic process (1.1%)" cytoplasm (20.4%) "phosphoribosylformylglycinamidine synthase activity (20.4%) ATP binding (19.4%) metal ion binding (19.4%)" "IPR029062 (11.6%) IPR036676 (11.6%) IPR010073 (11%)" "Class I glutamine amidotransferase-like (11.6%) PurM-like, C-terminal domain superfamily (11.6%) Phosphoribosylformylglycinamidine synthase PurL (11%)" EKGYEVYAACANTGGFSEEQLRTNEENAYK FVSPVSGEVTAVNRGEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "7.2.1.1 (96.6%) 1.6.5.- (3.4%)" "NADH:ubiquinone reductase (Na(+)-transporting) (96.6%) With a quinone or similar compound as acceptor (3.4%)" GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (20.6%) IPR022615 (20.6%) IPR056147 (20.6%)" "Na(+)-translocating NADH-quinone reductase subunit A (20.6%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (20.6%) NqrA, N-terminal barrel-sandwich hybrid domain (20.6%)" RGDIGNTSEMYAR Bacteroidota Bacteria Pseudomonadati Bacteroidota 4.1.1.23 (100%) orotidine-5'-phosphate decarboxylase (100%) "GO:0006207 (33.3%) GO:0044205 (32.3%) GO:0009220 (1%)" GO:0004590 (33.3%) "'de novo' pyrimidine nucleobase biosynthetic process (33.3%) 'de novo' UMP biosynthetic process (32.3%) pyrimidine ribonucleotide biosynthetic process (1%)" orotidine-5'-phosphate decarboxylase activity (33.3%) "IPR001754 (25%) IPR011060 (25%) IPR011995 (25%)" "Orotidine 5'-phosphate decarboxylase domain (25%) Ribulose-phosphate binding barrel (25%) Orotidine 5'-phosphate decarboxylase, type 2 (25%)" HFDGTTGSVYASPGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" AVEAEGADSVSLINTMLGMAIDAEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.3.-.- (85.2%) 1.3.1.14 (14.8%)" "Acting on the CH-CH group of donors (85.2%) dihydroorotate dehydrogenase (NAD(+)) (14.8%)" "GO:0006207 (25%) GO:0044205 (25%)" GO:0005737 (25%) "GO:0004152 (24%) GO:0004589 (1%)" "'de novo' pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" cytoplasm (25%) "dihydroorotate dehydrogenase activity (24%) dihydroorotate dehydrogenase (NAD+) activity (1%)" "IPR001295 (12.5%) IPR005720 (12.5%) IPR012135 (12.5%)" "Dihydroorotate dehydrogenase, conserved site (12.5%) Dihydroorotate dehydrogenase, catalytic (12.5%) Dihydroorotate dehydrogenase, class 1/ 2 (12.5%)" EAEAYDGPSLIIAYAPCINHGLKK Bacteria Bacteria "1.2.7.1 (90.9%) 1.2.7.- (9.1%)" "pyruvate synthase (90.9%) With an iron-sulfur protein as acceptor (9.1%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (12%)" "GO:0005506 (14.7%) GO:0030976 (14.7%) GO:0051539 (14.7%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (12%)" "iron ion binding (14.7%) thiamine pyrophosphate binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" CIKECLVPPTSYGYPFLGEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (25%) GO:0009898 (25%) "GO:0003842 (25%) GO:0004657 (25%)" L-proline catabolic process to L-glutamate (25%) cytoplasmic side of plasma membrane (25%) "L-glutamate gamma-semialdehyde dehydrogenase activity (25%) proline dehydrogenase activity (25%)" "IPR005931 (14.3%) IPR015590 (14.3%) IPR016160 (14.3%)" "Delta-1-pyrroline-5-carboxylate dehydrogenase (14.3%) Aldehyde dehydrogenase domain (14.3%) Aldehyde dehydrogenase, cysteine active site (14.3%)" RLMEFLGNVVPGVSEMPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.1%) IPR000795 (7.1%) IPR005225 (7.1%)" "Elongation factor EFG, domain V-like (7.1%) Translational (tr)-type GTP-binding domain (7.1%) Small GTP-binding domain (7.1%)" MGNTMLLATVCAAKDAVPGTDFMPLQVEYKEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.3%) GO:0006396 (14.2%) GO:0006401 (0.1%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "mRNA catabolic process (14.3%) RNA processing (14.2%) RNA catabolic process (0.1%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (7.9%) IPR012162 (7.9%) IPR015847 (7.9%)" "Exoribonuclease, phosphorolytic domain 1 (7.9%) Polyribonucleotide nucleotidyltransferase (7.9%) Exoribonuclease, phosphorolytic domain 2 (7.9%)" VAIVDFSTEKPIIYPNNGWK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0001678 (12.7%) GO:0006006 (12.7%) GO:0006096 (12.7%)" GO:0005829 (11.1%) "GO:0004340 (12.7%) GO:0005524 (12.7%) GO:0005536 (12.7%)" "intracellular glucose homeostasis (12.7%) glucose metabolic process (12.7%) glycolytic process (12.7%)" cytosol (11.1%) "glucokinase activity (12.7%) ATP binding (12.7%) D-glucose binding (12.7%)" "IPR001312 (25%) IPR022672 (25%) IPR022673 (25%)" "Hexokinase (25%) Hexokinase, N-terminal (25%) Hexokinase, C-terminal (25%)" NPSNPAVVSEIDGEVGFGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.1%) GO:0000428 (17.1%) "GO:0003677 (17.1%) GO:0003899 (17.1%) GO:0000287 (15.8%)" DNA-templated transcription (17.1%) DNA-directed RNA polymerase complex (17.1%) "DNA binding (17.1%) DNA-directed RNA polymerase activity (17.1%) magnesium ion binding (15.8%)" "IPR007081 (9.7%) IPR045867 (9.7%) IPR000722 (8.9%)" "RNA polymerase Rpb1, domain 5 (9.7%) DNA-directed RNA polymerase, subunit beta-prime (9.7%) RNA polymerase, alpha subunit (8.9%)" LGGSAFAQALNK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (20%) GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" 'de novo' IMP biosynthetic process (20%) cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" AFDSIMAETLK root "GO:0015833 (20.7%) GO:0015031 (18.5%) GO:0006857 (0.2%)" "GO:0030288 (20.6%) GO:0043190 (18.2%) GO:0005886 (0.2%)" "GO:1904680 (20.7%) GO:1900750 (0.2%)" "peptide transport (20.7%) protein transport (18.5%) oligopeptide transport (0.2%)" "outer membrane-bounded periplasmic space (20.6%) ATP-binding cassette (ABC) transporter complex (18.2%) plasma membrane (0.2%)" "peptide transmembrane transporter activity (20.7%) oligopeptide binding (0.2%)" "IPR039424 (26.5%) IPR000914 (26.3%) IPR030678 (23.3%)" "Solute-binding protein family 5 (26.5%) Solute-binding protein family 5 domain (26.3%) Peptide/nickel binding protein, MppA-type (23.3%)" SKATNLLYTR root 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0006879 (14%) GO:0030261 (14%) GO:0006950 (0.2%)" "GO:0005737 (14%) GO:0009295 (13.2%) GO:0016020 (0.2%)" "GO:0008199 (14.7%) GO:0016722 (14.7%) GO:0003677 (14%)" "intracellular iron ion homeostasis (14%) chromosome condensation (14%) response to stress (0.2%)" "cytoplasm (14%) nucleoid (13.2%) membrane (0.2%)" "ferric iron binding (14.7%) oxidoreductase activity, acting on metal ions (14.7%) DNA binding (14%)" "IPR012347 (16.9%) IPR002177 (16.8%) IPR008331 (16.8%)" "Ferritin-like (16.9%) DNA-binding protein Dps (16.8%) Ferritin/DPS domain (16.8%)" KSTPYAAGMAAESAAR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006412 (19.8%) GO:0005975 (0.1%) GO:0006351 (0.1%)" "GO:0005840 (19.9%) GO:1990904 (19.8%) GO:0000428 (0.1%)" "GO:0003735 (19.8%) GO:0019843 (19.5%) GO:0003677 (0.1%)" "translation (19.8%) carbohydrate metabolic process (0.1%) DNA-templated transcription (0.1%)" "ribosome (19.9%) ribonucleoprotein complex (19.8%) DNA-directed RNA polymerase complex (0.1%)" "structural constituent of ribosome (19.8%) rRNA binding (19.5%) DNA binding (0.1%)" "IPR001971 (24.7%) IPR036967 (24.7%) IPR019981 (24.2%)" "Small ribosomal subunit protein uS11 (24.7%) Small ribosomal subunit protein uS11 superfamily (24.7%) Small ribosomal subunit protein uS11, bacteria (24.2%)" IIYQSGLNTSDALTK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.3.1.129 (100%) acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (100%) "GO:0009245 (30.8%) GO:0008610 (2.6%)" GO:0016020 (30.8%) "GO:0008780 (33.3%) GO:0046872 (2.6%)" "lipid A biosynthetic process (30.8%) lipid biosynthetic process (2.6%)" membrane (30.8%) "acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity (33.3%) metal ion binding (2.6%)" "IPR001451 (20%) IPR010137 (20%) IPR011004 (20%)" "Hexapeptide repeat (20%) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (20%) Trimeric LpxA-like superfamily (20%)" EKVDATKQYDINEAIALLK root "GO:0006417 (16.9%) GO:0006412 (16.3%) GO:0000027 (0%)" "GO:0022625 (17%) GO:0005840 (0.4%) GO:0005737 (0%)" "GO:0000049 (16.4%) GO:0003735 (16.3%) GO:0019843 (16.3%)" "regulation of translation (16.9%) translation (16.3%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (17%) ribosome (0.4%) cytoplasm (0%)" "tRNA binding (16.4%) structural constituent of ribosome (16.3%) rRNA binding (16.3%)" "IPR023674 (17.2%) IPR028364 (17%) IPR016095 (16.5%)" "Ribosomal protein uL1-like (17.2%) Ribosomal protein uL1/ribosomal biogenesis protein (17%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.5%)" SNKQIYVQVIDDLSGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR004389 (34.1%) IPR005484 (34.1%) IPR057268 (31.8%)" "Large ribosomal subunit protein uL18, bacteria (34.1%) Large ribosomal subunit protein uL18, bacterial/plantae/animalia (34.1%) Large ribosomal subunit protein uL18 (31.8%)" VWITIFPDRPLTK Actinomycetes Bacteria Bacillati Actinomycetota Actinomycetes GO:0006412 (20%) GO:0022625 (20%) "GO:0000049 (20%) GO:0003735 (20%) GO:0019843 (20%)" translation (20%) cytosolic large ribosomal subunit (20%) "tRNA binding (20%) structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000114 (20%) IPR016180 (20%) IPR020798 (20%)" "Large ribosomal subunit protein uL16, bacteria (20%) Large ribosomal subunit protein uL16 domain (20%) Large ribosomal subunit protein uL16, conserved site (20%)" YLAKKYPESYDAAVPEELVYSGGLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.3.1 (100%) phosphoribosylformylglycinamidine cyclo-ligase (100%) "GO:0006189 (16.7%) GO:0046084 (16.7%)" GO:0005829 (16.7%) "GO:0004637 (16.7%) GO:0004641 (16.7%) GO:0005524 (16.7%)" "'de novo' IMP biosynthetic process (16.7%) adenine biosynthetic process (16.7%)" cytosol (16.7%) "phosphoribosylamine-glycine ligase activity (16.7%) phosphoribosylformylglycinamidine cyclo-ligase activity (16.7%) ATP binding (16.7%)" "IPR004733 (20%) IPR010918 (20%) IPR016188 (20%)" "Phosphoribosylformylglycinamidine cyclo-ligase (20%) PurM-like, C-terminal domain (20%) PurM-like, N-terminal domain (20%)" FEMPEIFVDEEVQKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.5.1.72 (100%) quinolinate synthase (100%) GO:0034628 (20%) GO:0005829 (20%) "GO:0008987 (20%) GO:0046872 (20%) GO:0051539 (20%)" 'de novo' NAD+ biosynthetic process from L-aspartate (20%) cytosol (20%) "quinolinate synthetase A activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR003473 (33.3%) IPR023066 (33.3%) IPR036094 (33.3%)" "Quinolinate synthetase A (33.3%) Quinolinate synthase A, type 2 (33.3%) Quinolinate synthetase A superfamily (33.3%)" LFTYKDFSGIRNEEDYLITENGAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25.7%) GO:0005829 (24.3%) "GO:0030145 (24.3%) GO:0070006 (24.3%) GO:0004177 (1.4%)" proteolysis (25.7%) cytosol (24.3%) "manganese ion binding (24.3%) metalloaminopeptidase activity (24.3%) aminopeptidase activity (1.4%)" "IPR000994 (20.5%) IPR036005 (20.5%) IPR052433 (20.5%)" "Peptidase M24 (20.5%) Creatinase/aminopeptidase-like (20.5%) Xaa-Pro dipeptidase-like (20.5%)" YNPFTHTVCR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" EVLGTHVEQK root 6.1.1.7 (100%) alanine--tRNA ligase (100%) "GO:0006419 (14.1%) GO:0045892 (0.7%)" "GO:0005737 (12.8%) GO:0005829 (1.1%)" "GO:0000049 (14.1%) GO:0002161 (14.1%) GO:0004813 (14.1%)" "alanyl-tRNA aminoacylation (14.1%) negative regulation of DNA-templated transcription (0.7%)" "cytoplasm (12.8%) cytosol (1.1%)" "tRNA binding (14.1%) aminoacyl-tRNA deacylase activity (14.1%) alanine-tRNA ligase activity (14.1%)" "IPR012947 (9.1%) IPR018163 (9.1%) IPR018165 (9.1%)" "Threonyl/alanyl tRNA synthetase, SAD (9.1%) Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily (9.1%) Alanyl-tRNA synthetase, class IIc, core domain (9.1%)" YLYENWTPVQIGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) GO:0005975 (50%) GO:0004563 (50%) carbohydrate metabolic process (50%) beta-N-acetylhexosaminidase activity (50%) "IPR015882 (16.7%) IPR015883 (16.7%) IPR017853 (16.7%)" "Beta-hexosaminidase, bacterial type, N-terminal (16.7%) Glycoside hydrolase family 20, catalytic domain (16.7%) Glycoside hydrolase superfamily (16.7%)" AYGDQCEACGTSLSPTDLIDPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004825 (16.7%) GO:0005524 (16.7%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) methionine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR001412 (8.3%) IPR002547 (8.3%) IPR004495 (8.3%)" "Aminoacyl-tRNA synthetase, class I, conserved site (8.3%) tRNA-binding domain (8.3%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.3%)" YHPHGDSSVYGALVR Bacteria Bacteria 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (12.7%) GO:0006261 (11.9%)" "GO:0005737 (12.7%) GO:0009330 (12.7%) GO:0005694 (12.1%)" "GO:0003677 (12.7%) GO:0005524 (12.7%) GO:0034335 (12.1%)" "DNA topological change (12.7%) DNA-templated DNA replication (11.9%)" "cytoplasm (12.7%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.7%) chromosome (12.1%)" "DNA binding (12.7%) ATP binding (12.7%) DNA negative supercoiling activity (12.1%)" "IPR002205 (12.7%) IPR050220 (12.7%) IPR013758 (12.6%)" "DNA topoisomerase, type IIA, domain A (12.7%) Type II DNA Topoisomerases (12.7%) DNA topoisomerase, type IIA, domain A, alpha-beta (12.6%)" VSGTLNWTAPSSVDNVTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR003961 (16.9%) IPR011044 (16.9%) IPR013783 (16.9%)" "Fibronectin type III (16.9%) Quinoprotein amine dehydrogenase, beta chain-like (16.9%) Immunoglobulin-like fold (16.9%)" EIEVLGTCDNTYPLQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20.1%) GO:0005737 (19.4%) "GO:0003676 (20.1%) GO:0005524 (20.1%) GO:0004816 (19.9%)" asparaginyl-tRNA aminoacylation (20.1%) cytoplasm (19.4%) "nucleic acid binding (20.1%) ATP binding (20.1%) asparagine-tRNA ligase activity (19.9%)" "IPR004365 (14.4%) IPR012340 (14.4%) IPR045864 (14.4%)" "OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (14.4%) Nucleic acid-binding, OB-fold (14.4%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (14.4%)" HKIIGTFEEITASVPEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0002181 (20%) GO:0015934 (20%) "GO:0003735 (20%) GO:0016740 (20%) GO:0019843 (19.7%)" cytoplasmic translation (20%) large ribosomal subunit (20%) "structural constituent of ribosome (20%) transferase activity (20%) rRNA binding (19.7%)" "IPR012340 (11.2%) IPR002171 (11.1%) IPR005880 (11.1%)" "Nucleic acid-binding, OB-fold (11.2%) Large ribosomal subunit protein uL2 (11.1%) Large ribosomal subunit protein uL2, bacteria/organella (11.1%)" GITVAHVVSSSK Bacteroidota Bacteria Pseudomonadati Bacteroidota "1.13.12.16 (50%) 5.3.1.16 (50%)" "nitronate monooxygenase (50%) 1-(5-phosphoribosyl)-5[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamidisomerase (50%)" "GO:0018580 (79.3%) GO:0051213 (13.8%) GO:0004497 (3.4%)" "nitronate monooxygenase activity (79.3%) dioxygenase activity (13.8%) monooxygenase activity (3.4%)" "IPR004136 (50%) IPR013785 (50%)" "Nitronate monooxygenase (50%) Aldolase-type TIM barrel (50%)" SLIRPELADELYDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0003700 (50%) GO:0043565 (50%)" "DNA-binding transcription factor activity (50%) sequence-specific DNA binding (50%)" "IPR009057 (50%) IPR018060 (50%)" "Homedomain-like superfamily (50%) AraC-like, DNA binding HTH domain (50%)" VTKGGANIIALR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (34.6%) "GO:0016616 (30.8%) GO:0016615 (30.1%) GO:0030060 (4.5%)" malate metabolic process (34.6%) "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (30.8%) malate dehydrogenase activity (30.1%) L-malate dehydrogenase (NAD+) activity (4.5%)" "IPR015955 (16.9%) IPR022383 (16.9%) IPR001236 (16.6%)" "Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (16.9%) Lactate/malate dehydrogenase, C-terminal (16.9%) Lactate/malate dehydrogenase, N-terminal (16.6%)" QNAITTTSDFTGAFNQAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.4.16 (100%) GTP cyclohydrolase I (100%) "GO:0006729 (14.4%) GO:0046654 (14.4%) GO:0006730 (13.7%)" GO:0005737 (14.4%) "GO:0003934 (14.4%) GO:0005525 (14.4%) GO:0008270 (14.4%)" "tetrahydrobiopterin biosynthetic process (14.4%) tetrahydrofolate biosynthetic process (14.4%) one-carbon metabolic process (13.7%)" cytoplasm (14.4%) "GTP cyclohydrolase I activity (14.4%) GTP binding (14.4%) zinc ion binding (14.4%)" "IPR001474 (20%) IPR018234 (20%) IPR020602 (20%)" "GTP cyclohydrolase I (20%) GTP cyclohydrolase I, conserved site (20%) GTP cyclohydrolase I domain (20%)" VYLAEHDVVTEMVPTER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0006516 (19.5%) GO:0005975 (18.8%)" GO:0005829 (19.5%) "GO:0000224 (19.5%) GO:0030246 (18.8%) GO:0016798 (3.9%)" "glycoprotein catabolic process (19.5%) carbohydrate metabolic process (18.8%)" cytosol (19.5%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.5%) carbohydrate binding (18.8%) hydrolase activity, acting on glycosyl bonds (3.9%)" "IPR005887 (16.9%) IPR012939 (16.9%) IPR041371 (16.9%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.9%) Glycosyl hydrolase family 92 (16.9%) Glycosyl hydrolase family 92 N-terminal domain (16.9%)" GMFPVFCVCAGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.1%) "GO:0003746 (25.3%) GO:0005525 (25.1%) GO:0003924 (24.6%)" ribosome disassembly (25.1%) "translation elongation factor activity (25.3%) GTP binding (25.1%) GTPase activity (24.6%)" "IPR009000 (7.7%) IPR027417 (7.7%) IPR053905 (7.7%)" "Translation protein, beta-barrel domain superfamily (7.7%) P-loop containing nucleoside triphosphate hydrolase (7.7%) Elongation factor G-like, domain II (7.7%)" GYGITIGNALRR Bacteria Bacteria 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) "GO:0000428 (16.7%) GO:0005737 (16.6%)" "GO:0003899 (16.7%) GO:0046983 (16.7%) GO:0003677 (16.6%)" DNA-templated transcription (16.7%) "DNA-directed RNA polymerase complex (16.7%) cytoplasm (16.6%)" "DNA-directed RNA polymerase activity (16.7%) protein dimerization activity (16.7%) DNA binding (16.6%)" "IPR011262 (17%) IPR011263 (17%) IPR036603 (17%)" "DNA-directed RNA polymerase, insert domain (17%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (17%) RNA polymerase, RBP11-like subunit (17%)" LIVEVQQHIGENTVR root "7.1.2.2 (99.1%) 3.6.3.14 (0.9%)" "H(+)-transporting two-sector ATPase (99.1%) Transferred entry: 7.1.2.2 (0.9%)" "GO:0045259 (22.9%) GO:0005886 (22.2%)" "GO:0005524 (22.9%) GO:0046933 (22.9%) GO:0016787 (8.6%)" "proton-transporting ATP synthase complex (22.9%) plasma membrane (22.2%)" "ATP binding (22.9%) proton-transporting ATP synthase activity, rotational mechanism (22.9%) hydrolase activity (8.6%)" "IPR000194 (10%) IPR003593 (10%) IPR004100 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10%)" LLDYIKPDIVHVLYK Pseudomonadati Bacteria Pseudomonadati GO:0016226 (0.6%) "GO:0005737 (0.6%) GO:1990229 (0.6%)" "GO:0005524 (49.1%) GO:0016887 (49.1%)" iron-sulfur cluster assembly (0.6%) "cytoplasm (0.6%) iron-sulfur cluster assembly complex (0.6%)" "ATP binding (49.1%) ATP hydrolysis activity (49.1%)" "IPR003439 (25.1%) IPR010230 (25.1%) IPR027417 (25.1%)" "ABC transporter-like, ATP-binding domain (25.1%) FeS cluster assembly SUF system, ATPase SufC (25.1%) P-loop containing nucleoside triphosphate hydrolase (25.1%)" IAGDDLTADIQEYMSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0000902 (25%) GO:0008360 (25%) GO:0043093 (0.3%)" "GO:0005737 (25%) GO:0005856 (0.3%) GO:0005886 (0.3%)" "GO:0005524 (23.7%) GO:0016787 (0.5%)" "cell morphogenesis (25%) regulation of cell shape (25%) FtsZ-dependent cytokinesis (0.3%)" "cytoplasm (25%) cytoskeleton (0.3%) plasma membrane (0.3%)" "ATP binding (23.7%) hydrolase activity (0.5%)" "IPR004753 (32.6%) IPR043129 (32.6%) IPR056546 (32.6%)" "Cell shape determining protein MreB (32.6%) ATPase, nucleotide binding domain (32.6%) MreB/MamK-like (32.6%)" TIEWLNYIATELHK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 2.5.1.18 (100%) glutathione transferase (100%) GO:0042542 (0.1%) GO:0005737 (10.4%) "GO:0004364 (49.6%) GO:0016740 (39.6%) GO:0016853 (0.1%)" response to hydrogen peroxide (0.1%) cytoplasm (10.4%) "glutathione transferase activity (49.6%) transferase activity (39.6%) isomerase activity (0.1%)" "IPR036282 (17.6%) IPR004046 (17.6%) IPR010987 (17.6%)" "Glutathione S-transferase, C-terminal domain superfamily (17.6%) Glutathione S-transferase, C-terminal (17.6%) Glutathione S-transferase, C-terminal-like (17.6%)" LFVLPNETIVYPGHGAPTTIGIEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.-.-.- (66.7%) 3.1.2.6 (33.3%)" "Hydrolases (66.7%) hydroxyacylglutathione hydrolase (33.3%)" "GO:0016787 (50%) GO:0046872 (50%)" "hydrolase activity (50%) metal ion binding (50%)" "IPR001279 (33.3%) IPR036866 (33.3%) IPR051453 (33.3%)" "Metallo-beta-lactamase (33.3%) Ribonuclease Z/Hydroxyacylglutathione hydrolase-like (33.3%) Metallo-Beta-Lactamase Glyoxalase II (33.3%)" LFVHHIQNAESGAVVEFDKVLLVDNNGEVTVGVPTVEGAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR001787 (33.3%) IPR028909 (33.3%) IPR036164 (33.3%)" "Large ribosomal subunit protein bL21 (33.3%) Large ribosomal subunit protein bL21-like (33.3%) Large ribosomal subunit protein bL21-like superfamily (33.3%)" IVNNPDYPVQFLFTGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.2%) "GO:0030170 (33.2%) GO:0008184 (32.9%) GO:0004645 (0.3%)" carbohydrate metabolic process (33.2%) "pyridoxal phosphate binding (33.2%) glycogen phosphorylase activity (32.9%) 1,4-alpha-oligoglucan phosphorylase activity (0.3%)" "IPR011834 (25.2%) IPR052182 (25.2%) IPR000811 (24.9%)" "Alpha-glucan phosphorylase (25.2%) Glycogen_Maltodextrin_Phosphorylase (25.2%) Glycosyl transferase, family 35 (24.9%)" NNPVLIGEPGVGK root "3.4.21.92 (83.3%) 3.4.-.- (16.7%)" "endopeptidase Clp (83.3%) Acting on peptide bonds (peptidases) (16.7%)" "GO:0034605 (18%) GO:0042026 (12.6%) GO:0006508 (5.2%)" "GO:0005737 (14.3%) GO:0005829 (3.5%) GO:0009507 (0.4%)" "GO:0005524 (18.2%) GO:0016887 (18.2%) GO:0008233 (5.2%)" "cellular response to heat (18%) protein refolding (12.6%) proteolysis (5.2%)" "cytoplasm (14.3%) cytosol (3.5%) chloroplast (0.4%)" "ATP binding (18.2%) ATP hydrolysis activity (18.2%) peptidase activity (5.2%)" "IPR050130 (8.6%) IPR027417 (8.6%) IPR003959 (8.6%)" "ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%) P-loop containing nucleoside triphosphate hydrolase (8.6%) ATPase, AAA-type, core (8.6%)" RDQWALNTDYVYPGPIQYFGPTEVCDQPTK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" TYGGHGEQMAVYASTAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (34.4%) "GO:0016615 (31.3%) GO:0016616 (31.3%) GO:0030060 (3.1%)" malate metabolic process (34.4%) "malate dehydrogenase activity (31.3%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (31.3%) L-malate dehydrogenase (NAD+) activity (3.1%)" "IPR010945 (16.8%) IPR015955 (16.8%) IPR022383 (16.8%)" "Malate dehydrogenase, type 2 (16.8%) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (16.8%) Lactate/malate dehydrogenase, C-terminal (16.8%)" KGISEVQIAEQLACFQK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" LLDQGEAGDNVGLLLR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0006414 (0.1%) "GO:0005829 (15.6%) GO:0032045 (5.2%) GO:0005737 (2.3%)" "GO:0003746 (18.4%) GO:0005525 (18.3%) GO:0003924 (18%)" translational elongation (0.1%) "cytosol (15.6%) guanyl-nucleotide exchange factor complex (5.2%) cytoplasm (2.3%)" "translation elongation factor activity (18.4%) GTP binding (18.3%) GTPase activity (18%)" "IPR004161 (8.5%) IPR009000 (8.5%) IPR050055 (8.5%)" "Translation elongation factor EFTu-like, domain 2 (8.5%) Translation protein, beta-barrel domain superfamily (8.5%) Elongation factor Tu GTPase (8.5%)" MVATGFVSCPQCHEPK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0006412 (33.3%) GO:0015934 (33.3%) GO:0003735 (33.3%) translation (33.3%) large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR002677 (33.3%) IPR011332 (33.3%) IPR044957 (33.3%)" "Large ribosomal subunit protein bL32 (33.3%) Zinc-binding ribosomal protein (33.3%) Large ribosomal subunit protein bL32, bacteria (33.3%)" AGLSHFFNVLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.2.2.9 (100%) adenosylhomocysteine nucleosidase (100%) "GO:0009116 (20%) GO:0019284 (20%)" GO:0005829 (20%) "GO:0008782 (20%) GO:0008930 (20%)" "nucleoside metabolic process (20%) L-methionine salvage from S-adenosylmethionine (20%)" cytosol (20%) "adenosylhomocysteine nucleosidase activity (20%) methylthioadenosine nucleosidase activity (20%)" "IPR000845 (50%) IPR035994 (50%)" "Nucleoside phosphorylase domain (50%) Nucleoside phosphorylase superfamily (50%)" VLPIYQSTTFKYDTSEQMAR Bacteria Bacteria "4.4.1.11 (52.2%) 2.5.1.49 (30.4%) 2.5.1.48 (13%)" "methionine gamma-lyase (52.2%) O-acetylhomoserine aminocarboxypropyltransferase (30.4%) cystathionine gamma-synthase (13%)" "GO:0019346 (13.8%) GO:0071269 (13.8%) GO:0006535 (13.6%)" GO:0005737 (13.6%) "GO:0004124 (13.8%) GO:0030170 (13.8%) GO:0003961 (13.6%)" "transsulfuration (13.8%) L-homocysteine biosynthetic process (13.8%) cysteine biosynthetic process from serine (13.6%)" cytoplasm (13.6%) "cysteine synthase activity (13.8%) pyridoxal phosphate binding (13.8%) O-acetylhomoserine aminocarboxypropyltransferase activity (13.6%)" "IPR000277 (20.1%) IPR006235 (20.1%) IPR015421 (20.1%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (20.1%) O-acetylhomoserine/O-acetylserine sulfhydrylase (20.1%) Pyridoxal phosphate-dependent transferase, major domain (20.1%)" YVDQLLNDGHAYIAFDTPAELEEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.17 (100%) glutamate--tRNA ligase (100%) GO:0006424 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004818 (16.7%) GO:0005524 (16.7%)" glutamyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) glutamate-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR000924 (10%) IPR001412 (10%) IPR004527 (10%)" "Glutamyl/glutaminyl-tRNA synthetase (10%) Aminoacyl-tRNA synthetase, class I, conserved site (10%) Glutamate-tRNA ligase, bacterial/mitochondrial (10%)" ISAPEDLEKIVESILQGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "3.4.21.107 (66.7%) 3.4.21.- (33.3%)" "peptidase Do (66.7%) Serine endopeptidases (33.3%)" GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001478 (16.7%) IPR001940 (16.7%) IPR009003 (16.7%)" "PDZ domain (16.7%) Peptidase S1C (16.7%) Peptidase S1, PA clan (16.7%)" GIDFAFVTMHAGLGNFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.99.17 (100%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (100%) "GO:0002099 (32.7%) GO:0008616 (1.8%)" GO:0005737 (32.7%) GO:0051075 (32.7%) "tRNA wobble guanine modification (32.7%) tRNA queuosine(34) biosynthetic process (1.8%)" cytoplasm (32.7%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity (32.7%) "IPR003699 (25%) IPR036100 (25%) IPR042118 (25%)" "S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA (25%) S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily (25%) QueA, domain 1 (25%)" RAENGMIYDPVTITK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" ENQRFPEPIITPTTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) "GO:0006189 (24.7%) GO:0039694 (0.6%)" GO:0005737 (24.7%) "GO:0004639 (24.7%) GO:0005524 (24.7%) GO:0003968 (0.6%)" "'de novo' IMP biosynthetic process (24.7%) viral RNA genome replication (0.6%)" cytoplasm (24.7%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (24.7%) ATP binding (24.7%) RNA-directed RNA polymerase activity (0.6%)" "IPR018236 (49.4%) IPR028923 (49.4%) IPR007094 (1.3%)" "SAICAR synthetase, conserved site (49.4%) SAICAR synthetase/ADE2, N-terminal (49.4%) RNA-directed RNA polymerase, catalytic domain (1.3%)" ISISQIKEVVQQAYEQVKGNTGGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" CAYVCPHASIRPF Bacteria Bacteria "1.2.7.1 (68%) 1.2.7.- (28%) 1.2.1.51 (4%)" "pyruvate synthase (68%) With an iron-sulfur protein as acceptor (28%) pyruvate dehydrogenase (NADP(+)) (4%)" "GO:0006979 (14.6%) GO:0022900 (14.6%) GO:0044281 (12.2%)" "GO:0005506 (14.6%) GO:0051539 (14.6%) GO:0030976 (14.4%)" "response to oxidative stress (14.6%) electron transport chain (14.6%) small molecule metabolic process (12.2%)" "iron ion binding (14.6%) 4 iron, 4 sulfur cluster binding (14.6%) thiamine pyrophosphate binding (14.4%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" ASNQGNIIELALGYTHNIFIQLPPEVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0002181 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" cytoplasmic translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000702 (20%) IPR002358 (20%) IPR019906 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, conserved site (20%) Large ribosomal subunit protein uL6, bacteria (20%)" LKGEEVIMIGGSDEHGVPITIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004825 (16.7%) GO:0005524 (16.7%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) methionine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR001412 (8.3%) IPR002547 (8.3%) IPR004495 (8.3%)" "Aminoacyl-tRNA synthetase, class I, conserved site (8.3%) tRNA-binding domain (8.3%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.3%)" TYGLPTIVTNCSNNYGPYHFPEK root "4.2.1.46 (99.9%) 4.2.1.47 (0.1%)" "dTDP-glucose 4,6-dehydratase (99.9%) GDP-mannose 4,6-dehydratase (0.1%)" "GO:0009225 (46.1%) GO:1901137 (4.4%) GO:0009103 (2.1%)" "GO:0016020 (0.1%) GO:0005829 (0%)" "GO:0008460 (46.4%) GO:0016829 (0.4%) GO:0000166 (0%)" "nucleotide-sugar metabolic process (46.1%) carbohydrate derivative biosynthetic process (4.4%) lipopolysaccharide biosynthetic process (2.1%)" "membrane (0.1%) cytosol (0%)" "dTDP-glucose 4,6-dehydratase activity (46.4%) lyase activity (0.4%) nucleotide binding (0%)" "IPR016040 (33.2%) IPR036291 (33.1%) IPR005888 (32.8%)" "NAD(P)-binding domain (33.2%) NAD(P)-binding domain superfamily (33.1%) dTDP-glucose 4,6-dehydratase (32.8%)" GGLSFNLADVLIPAEKDALVQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" SYAFYSIVIADVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (24.9%) "GO:0005737 (24.9%) GO:0015935 (24.9%) GO:0005840 (0.4%)" GO:0003735 (24.9%) translation (24.9%) "cytoplasm (24.9%) small ribosomal subunit (24.9%) ribosome (0.4%)" structural constituent of ribosome (24.9%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" KTTEIRPIWCEVGYLPGPHGSAIFTR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (7.8%) IPR012162 (7.8%) IPR015847 (7.8%)" "Exoribonuclease, phosphorolytic domain 1 (7.8%) Polyribonucleotide nucleotidyltransferase (7.8%) Exoribonuclease, phosphorolytic domain 2 (7.8%)" YFTTNLLDLDTIMVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (17.6%) IPR014628 (17.6%) IPR014710 (17.6%)" "RmlC-like cupin domain superfamily (17.6%) Mannose-6-phosphate isomerase, Firmicutes type, short form (17.6%) RmlC-like jelly roll fold (17.6%)" FHFHCQYDEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.7%) GO:0015966 (12.1%) GO:0044281 (0.5%)" "GO:0005737 (12.7%) GO:0070062 (12.1%) GO:1990742 (12.1%)" "GO:0004820 (12.7%) GO:0005524 (12.7%) GO:0004081 (12.1%)" "glycyl-tRNA aminoacylation (12.7%) diadenosine tetraphosphate biosynthetic process (12.1%) small molecule metabolic process (0.5%)" "cytoplasm (12.7%) extracellular exosome (12.1%) microvesicle (12.1%)" "glycine-tRNA ligase activity (12.7%) ATP binding (12.7%) bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.1%)" "IPR004154 (11.2%) IPR027031 (11.2%) IPR036621 (11.2%)" "Anticodon-binding (11.2%) Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 (11.2%) Anticodon-binding domain superfamily (11.2%)" NVLGYADANSIEMDEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.8%) GO:0044210 (11.8%)" "GO:0005829 (11.8%) GO:0097268 (10.3%)" "GO:0003883 (11.8%) GO:0005524 (11.8%) GO:0042802 (11.8%)" "pyrimidine nucleobase biosynthetic process (11.8%) 'de novo' CTP biosynthetic process (11.8%)" "cytosol (11.8%) cytoophidium (10.3%)" "CTP synthase activity (11.8%) ATP binding (11.8%) identical protein binding (11.8%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" VESSKDFLIATLKPR root "1.3.5.1 (99%) 1.3.99.1 (0.7%) 1.-.-.- (0.2%)" "succinate dehydrogenase (99%) Deleted entry (0.7%) Oxidoreductases (0.2%)" "GO:0009061 (11.3%) GO:0006099 (11.1%) GO:0006113 (0%)" "GO:0005886 (10.8%) GO:0045283 (0%) GO:0005829 (0%)" "GO:0046872 (11.3%) GO:0051539 (11.3%) GO:0051537 (11.1%)" "anaerobic respiration (11.3%) tricarboxylic acid cycle (11.1%) fermentation (0%)" "plasma membrane (10.8%) fumarate reductase complex (0%) cytosol (0%)" "metal ion binding (11.3%) 4 iron, 4 sulfur cluster binding (11.3%) 2 iron, 2 sulfur cluster binding (11.1%)" "IPR009051 (11.4%) IPR004489 (11.2%) IPR017896 (11.2%)" "Alpha-helical ferredoxin (11.4%) Succinate dehydrogenase/fumarate reductase iron-sulphur protein (11.2%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (11.2%)" SSPYGTVEDPFVPAELALGAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.7.11 (50%) 1.2.7.3 (50%)" "2-oxoacid oxidoreductase (ferredoxin) (50%) 2-oxoglutarate synthase (50%)" GO:0044281 (33.3%) "GO:0016625 (33.3%) GO:0030976 (33.3%)" small molecule metabolic process (33.3%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (33.3%) thiamine pyrophosphate binding (33.3%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" RGDMNSPVLVGGGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.1%) "GO:0005840 (20.5%) GO:1990904 (20.1%)" "GO:0003735 (20.1%) GO:0019843 (18.9%) GO:0003723 (0.4%)" translation (20.1%) "ribosome (20.5%) ribonucleoprotein complex (20.1%)" "structural constituent of ribosome (20.1%) rRNA binding (18.9%) RNA binding (0.4%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" ENAAQQAEIAELK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006811 (25%) "GO:0009279 (25%) GO:0046930 (25%)" GO:0015288 (25%) monoatomic ion transport (25%) "cell outer membrane (25%) pore complex (25%)" porin activity (25%) "IPR006664 (19.4%) IPR006665 (19.4%) IPR011250 (19.4%)" "Outer membrane protein, bacterial (19.4%) OmpA-like domain (19.4%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (19.4%)" DNAKEFIATIIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (16.9%) GO:0006417 (16.2%)" GO:0015934 (16.9%) "GO:0003735 (16.9%) GO:0019843 (16.9%) GO:0000049 (16.2%)" "translation (16.9%) regulation of translation (16.2%)" large ribosomal subunit (16.9%) "structural constituent of ribosome (16.9%) rRNA binding (16.9%) tRNA binding (16.2%)" "IPR002143 (16.7%) IPR005878 (16.7%) IPR016095 (16.7%)" "Large ribosomal subunit protein uL1 (16.7%) Large ribosomal subunit protein uL1, bacteria (16.7%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" NQALTGEYENSPYYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25.4%) GO:0009341 (25.4%) "GO:0004565 (25.4%) GO:0030246 (23.7%)" lactose catabolic process (25.4%) beta-galactosidase complex (25.4%) "beta-galactosidase activity (25.4%) carbohydrate binding (23.7%)" "IPR006104 (7.4%) IPR008979 (7.4%) IPR050347 (7.4%)" "Glycosyl hydrolases family 2, sugar binding domain (7.4%) Galactose-binding-like domain superfamily (7.4%) Bacterial Beta-galactosidase (7.4%)" IMVNAHEAVRPTGICR Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.2.1.22 (45.1%) 3.2.1.3 (27.5%) 3.2.1.- (13.7%)" "alpha-galactosidase (45.1%) glucan 1,4-alpha-glucosidase (27.5%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (13.7%)" GO:0016020 (0.1%) "GO:0030246 (59.1%) GO:0016787 (33.7%) GO:0004557 (2.8%)" membrane (0.1%) "carbohydrate binding (59.1%) hydrolase activity (33.7%) alpha-galactosidase activity (2.8%)" "IPR019563 (14.4%) IPR052720 (14.4%) IPR013785 (14.3%)" "Glycosyl-hydrolase 97, catalytic domain (14.4%) Glycosyl Hydrolase Family 97 (14.4%) Aldolase-type TIM barrel (14.3%)" DRVPFDHLTPLFPDEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "3.6.4.- (99.2%) 3.6.1.- (0.8%)" "Acting on ATP; involved in cellular and subcellular movement (99.2%) In phosphorus-containing anhydrides (0.8%)" GO:0006353 (14.3%) GO:0005829 (14.2%) "GO:0003723 (14.3%) GO:0004386 (14.3%) GO:0005524 (14.3%)" DNA-templated transcription termination (14.3%) cytosol (14.2%) "RNA binding (14.3%) helicase activity (14.3%) ATP binding (14.3%)" "IPR000194 (10%) IPR003593 (10%) IPR004665 (10%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10%) AAA+ ATPase domain (10%) Transcription termination factor Rho (10%)" VSSALTSGLTADCTQLEIGTHEDKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) GO:0033539 (32.6%) "GO:0009055 (32.6%) GO:0050660 (32.6%) GO:0016491 (2.3%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (32.6%) "electron transfer activity (32.6%) flavin adenine dinucleotide binding (32.6%) oxidoreductase activity (2.3%)" "IPR001308 (16.7%) IPR014729 (16.7%) IPR014730 (16.7%)" "Electron transfer flavoprotein alpha subunit/FixB (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.7%)" VINLDKESEPDIFNAIKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.4%) GO:0005829 (17.4%) "GO:0004612 (17.4%) GO:0005524 (17.4%) GO:0046872 (17.4%)" gluconeogenesis (17.4%) cytosol (17.4%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.4%) ATP binding (17.4%) metal ion binding (17.4%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" AHLLFTDIER Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.4.1.1 (100%) glycogen phosphorylase (100%) "GO:0005975 (32.8%) GO:0005978 (0.4%)" "GO:0030170 (33.2%) GO:0008184 (33%) GO:0004373 (0.4%)" "carbohydrate metabolic process (32.8%) glycogen biosynthetic process (0.4%)" "pyridoxal phosphate binding (33.2%) glycogen phosphorylase activity (33%) alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (0.4%)" "IPR011834 (25%) IPR052182 (25%) IPR000811 (24.9%)" "Alpha-glucan phosphorylase (25%) Glycogen_Maltodextrin_Phosphorylase (25%) Glycosyl transferase, family 35 (24.9%)" QAEAETQTASGLFIPDNAK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0051085 (0.5%) GO:0005737 (16.6%) "GO:0005524 (16.6%) GO:0044183 (16.6%) GO:0046872 (16.6%)" obsolete chaperone cofactor-dependent protein refolding (0.5%) cytoplasm (16.6%) "ATP binding (16.6%) protein folding chaperone (16.6%) metal ion binding (16.6%)" "IPR011032 (25.8%) IPR020818 (25.8%) IPR037124 (25.8%)" "GroES-like superfamily (25.8%) GroES chaperonin family (25.8%) GroES chaperonin superfamily (25.8%)" LVRLPLNQVSAVNK GITINTSHVEYDTPTR root "3.6.5.3 (99.8%) 1.97.1.4 (0.2%)" "protein-synthesizing GTPase (99.8%) [formate-C-acetyltransferase]-activating enzyme (0.2%)" "GO:0006414 (0%) GO:0046677 (0%)" "GO:0005829 (18.4%) GO:0032045 (8.1%) GO:0005886 (0.9%)" "GO:0003746 (18.6%) GO:0003924 (18.4%) GO:0005525 (18.4%)" "translational elongation (0%) response to antibiotic (0%)" "cytosol (18.4%) guanyl-nucleotide exchange factor complex (8.1%) plasma membrane (0.9%)" "translation elongation factor activity (18.6%) GTPase activity (18.4%) GTP binding (18.4%)" "IPR000795 (12.6%) IPR050055 (12.6%) IPR027417 (12.6%)" "Translational (tr)-type GTP-binding domain (12.6%) Elongation factor Tu GTPase (12.6%) P-loop containing nucleoside triphosphate hydrolase (12.6%)" NVLEELEYVPLKQR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (25%) "GO:0036440 (23.9%) GO:0046912 (1.1%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (25%) "citrate synthase activity (23.9%) acyltransferase activity, acyl groups converted into alkyl on transfer (1.1%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" EIFHSDEGVKEFVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (14.4%) GO:0006261 (10.5%)" "GO:0005737 (11.1%) GO:0005694 (10.5%)" "GO:0003677 (14.4%) GO:0005524 (14.4%) GO:0034335 (10.5%)" "DNA topological change (14.4%) DNA-templated DNA replication (10.5%)" "cytoplasm (11.1%) chromosome (10.5%)" "DNA binding (14.4%) ATP binding (14.4%) DNA negative supercoiling activity (10.5%)" "IPR000565 (8.1%) IPR001241 (8.1%) IPR006171 (8.1%)" "DNA topoisomerase, type IIA, subunit B (8.1%) DNA topoisomerase, type IIA (8.1%) TOPRIM domain (8.1%)" ANATAPAINVIENEKDYKVELAAPGMTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006457 (16.7%) GO:0009408 (16.7%) GO:0009651 (16.7%)" GO:0051082 (16.7%) "protein folding (16.7%) response to heat (16.7%) response to salt stress (16.7%)" unfolded protein binding (16.7%) "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" QAVENDVHVMGVSSLAAGHK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006158 (16.8%) IPR006159 (16.8%) IPR036724 (16.8%)" "Cobalamin (vitamin B12)-binding domain (16.8%) Methylmalonyl-CoA mutase, C-terminal (16.8%) Cobalamin-binding domain superfamily (16.8%)" FDGFVHSIGFAPGDQLDGDYVNAVTR root 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) "GO:0006633 (34.2%) GO:0009102 (29.9%) GO:0030497 (0.2%)" "GO:0005829 (0.1%) GO:0005886 (0.1%) GO:0016020 (0.1%)" "GO:0004318 (34.4%) GO:0016491 (0.3%) GO:0042802 (0.2%)" "fatty acid biosynthetic process (34.2%) biotin biosynthetic process (29.9%) fatty acid elongation (0.2%)" "cytosol (0.1%) plasma membrane (0.1%) membrane (0.1%)" "enoyl-[acyl-carrier-protein] reductase (NADH) activity (34.4%) oxidoreductase activity (0.3%) identical protein binding (0.2%)" "IPR002347 (33.2%) IPR014358 (33.2%) IPR036291 (33.2%)" "Short-chain dehydrogenase/reductase SDR (33.2%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.2%) NAD(P)-binding domain superfamily (33.2%)" NEPERIEHLWDITNYSLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.3.1.50 (70%) 2.3.1.47 (30%)" "serine C-palmitoyltransferase (70%) 8-amino-7-oxononanoate synthase (30%)" "GO:0030170 (45.2%) GO:0004758 (16.1%) GO:0008710 (9.7%)" "pyridoxal phosphate binding (45.2%) serine C-palmitoyltransferase activity (16.1%) 8-amino-7-oxononanoate synthase activity (9.7%)" "IPR001917 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class-II, pyridoxal-phosphate binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" HHQTYVTNLNNLIK root 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0000303 (0%) GO:0006801 (0%) GO:0019430 (0%)" "GO:0005737 (32%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0004784 (33.7%) GO:0046914 (31.2%) GO:0046872 (2.5%)" "response to superoxide (0%) superoxide metabolic process (0%) removal of superoxide radicals (0%)" "cytoplasm (32%) cytosol (0%) membrane (0%)" "superoxide dismutase activity (33.7%) transition metal ion binding (31.2%) metal ion binding (2.5%)" "IPR019831 (16.8%) IPR036324 (16.8%) IPR001189 (16.8%)" "Manganese/iron superoxide dismutase, N-terminal (16.8%) Manganese/iron superoxide dismutase, N-terminal domain superfamily (16.8%) Manganese/iron superoxide dismutase (16.8%)" AASGNIIPSSTGAAK root "1.2.1.- (69.2%) 1.2.1.12 (29.3%) 1.2.1.13 (0.9%)" "With NAD(+) or NADP(+) as acceptor (69.2%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (29.3%) glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) (0.9%)" "GO:0006006 (19.5%) GO:0006096 (9.6%) GO:0019253 (0.1%)" "GO:0005829 (8.3%) GO:0009507 (0.1%)" "GO:0051287 (20.9%) GO:0050661 (19.5%) GO:0004365 (15.1%)" "glucose metabolic process (19.5%) glycolytic process (9.6%) reductive pentose-phosphate cycle (0.1%)" "cytosol (8.3%) chloroplast (0.1%)" "NAD binding (20.9%) NADP binding (19.5%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (15.1%)" "IPR020829 (17.3%) IPR020831 (17.3%) IPR020830 (16.6%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (17.3%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (17.3%) Glyceraldehyde 3-phosphate dehydrogenase, active site (16.6%)" NISAVYSDLAETILPQLRR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (58.7%) IPR019734 (39.1%) IPR036737 (2.2%)" "Tetratricopeptide-like helical domain superfamily (58.7%) Tetratricopeptide repeat (39.1%) OmpA-like domain superfamily (2.2%)" GLATGVIGTAATVAGAVFAVKK Streptococcus Bacteria Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus IPR021402 (100%) Protein of unknown function DUF3042 (100%) AAFNQMVQGHKLPAWVMK root GO:0061077 (1%) "GO:0042597 (96%) GO:0030288 (1%)" "GO:0042803 (1%) GO:0060241 (1%)" obsolete chaperone-mediated protein folding (1%) "periplasmic space (96%) outer membrane-bounded periplasmic space (1%)" "protein homodimerization activity (1%) lysozyme inhibitor activity (1%)" "IPR036501 (50.7%) IPR014453 (49.3%)" "Inhibitor of vertebrate lysozyme superfamily (50.7%) Inhibitor of vertebrate lysozyme (49.3%)" NDYNSNVVQGFFDQKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR024302 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like (50%)" KYGQTGESNWISSANYENAQVDGDNLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR027304 (33.3%) IPR046357 (33.3%) IPR052029 (33.3%)" "Trigger factor/SurA domain superfamily (33.3%) Peptidyl-prolyl cis-trans isomerase domain superfamily (33.3%) Periplasmic chaperone PpiD (33.3%)" VVGCTNDYEKTANSDVVVITSGIPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25.3%) GO:0006099 (24.1%)" "GO:0004459 (25.3%) GO:0030060 (24.1%) GO:0016491 (1.1%)" "lactate metabolic process (25.3%) tricarboxylic acid cycle (24.1%)" "L-lactate dehydrogenase (NAD+) activity (25.3%) L-malate dehydrogenase (NAD+) activity (24.1%) oxidoreductase activity (1.1%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR011275 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 3 (16.7%)" ILEVTNCDLAIIGAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (33.5%) "GO:0008448 (33.5%) GO:0046872 (32.9%)" N-acetylglucosamine catabolic process (33.5%) "N-acetylglucosamine-6-phosphate deacetylase activity (33.5%) metal ion binding (32.9%)" "IPR003764 (25%) IPR006680 (25%) IPR011059 (25%)" "N-acetylglucosamine-6-phosphate deacetylase (25%) Amidohydrolase-related (25%) Metal-dependent hydrolase, composite domain superfamily (25%)" MKADMVDKIDYAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.24.55 (100%) pitrilysin (100%) GO:0006508 (33.3%) "GO:0004222 (33.3%) GO:0046872 (33.3%)" proteolysis (33.3%) "metalloendopeptidase activity (33.3%) metal ion binding (33.3%)" "IPR001431 (20%) IPR007863 (20%) IPR011249 (20%)" "Peptidase M16, zinc-binding site (20%) Peptidase M16, C-terminal (20%) Metalloenzyme, LuxS/M16 peptidase-like (20%)" STENESRQEGAANEENQNVSR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (32.8%) "GO:0003723 (32.8%) GO:0120159 (32.8%) GO:0016829 (1.7%)" enzyme-directed rRNA pseudouridine synthesis (32.8%) "RNA binding (32.8%) rRNA pseudouridine synthase activity (32.8%) lyase activity (1.7%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" EMVGQFVGKPLLDYLNEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0001678 (12.7%) GO:0006006 (12.7%) GO:0006096 (12.7%)" GO:0005829 (11.1%) "GO:0004340 (12.7%) GO:0005524 (12.7%) GO:0005536 (12.7%)" "intracellular glucose homeostasis (12.7%) glucose metabolic process (12.7%) glycolytic process (12.7%)" cytosol (11.1%) "glucokinase activity (12.7%) ATP binding (12.7%) D-glucose binding (12.7%)" "IPR001312 (25%) IPR022672 (25%) IPR022673 (25%)" "Hexokinase (25%) Hexokinase, N-terminal (25%) Hexokinase, C-terminal (25%)" IQELGIPMKDMWWYLDTR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20%) GO:0005737 (20%) "GO:0003676 (20%) GO:0004816 (20%) GO:0005524 (20%)" asparaginyl-tRNA aminoacylation (20%) cytoplasm (20%) "nucleic acid binding (20%) asparagine-tRNA ligase activity (20%) ATP binding (20%)" "IPR002312 (14.3%) IPR004364 (14.3%) IPR004365 (14.3%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.3%) Aminoacyl-tRNA synthetase, class II (D/K/N) (14.3%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (14.3%)" QVAMQVAAMNPIAVDEDGVSEEVKQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" AEDGTNVTYQELAWK Phocaeicola vulgatus Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus TSNIGLIGLAVMGENLALNMESK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" ANEVVEIFTEFPELVDPHTGRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (23%) GO:0046034 (1.6%) GO:1902600 (0.2%)" "GO:0005524 (24.6%) GO:0046961 (24.6%) GO:0046933 (23%)" "proton motive force-driven plasma membrane ATP synthesis (23%) ATP metabolic process (1.6%) proton transmembrane transport (0.2%)" "ATP binding (24.6%) proton-transporting ATPase activity, rotational mechanism (24.6%) proton-transporting ATP synthase activity, rotational mechanism (23%)" "IPR000194 (13.1%) IPR022878 (13.1%) IPR027417 (13.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (13.1%) V-type ATP synthase catalytic alpha chain (13.1%) P-loop containing nucleoside triphosphate hydrolase (13.1%)" IAEAEAFEFADIDHIGSYREDNTYNQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.10 (76.9%) 5.4.2.2 (15.4%) 5.4.2.8 (7.7%)" "phosphoglucosamine mutase (76.9%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (15.4%) phosphomannomutase (7.7%)" "GO:0005975 (14%) GO:0006048 (14%) GO:0009252 (14%)" GO:0005829 (14%) "GO:0000287 (14%) GO:0004615 (14%) GO:0008966 (14%)" "carbohydrate metabolic process (14%) UDP-N-acetylglucosamine biosynthetic process (14%) peptidoglycan biosynthetic process (14%)" cytosol (14%) "magnesium ion binding (14%) phosphomannomutase activity (14%) phosphoglucosamine mutase activity (14%)" "IPR005841 (10%) IPR005843 (10%) IPR005844 (10%)" "Alpha-D-phosphohexomutase superfamily (10%) Alpha-D-phosphohexomutase, C-terminal (10%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10%)" SCIDSGFSSVMIDGSHLPYEENIALTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "4.1.2.- (50%) 4.1.2.13 (50%)" "Aldehyde-lyases (50%) fructose-bisphosphate aldolase (50%)" "GO:0006096 (25%) GO:0030388 (25%)" "GO:0004332 (25%) GO:0008270 (25%)" "glycolytic process (25%) fructose 1,6-bisphosphate metabolic process (25%)" "fructose-bisphosphate aldolase activity (25%) zinc ion binding (25%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" AANIIGIQIEFAK Bacteria Bacteria "GO:0006412 (24.7%) GO:0002181 (0%)" "GO:0022625 (24.6%) GO:0005840 (0.8%) GO:1990904 (0.3%)" "GO:0003735 (24.8%) GO:0019843 (24.7%)" "translation (24.7%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.6%) ribosome (0.8%) ribonucleoprotein complex (0.3%)" "structural constituent of ribosome (24.8%) rRNA binding (24.7%)" "IPR036227 (20.2%) IPR021131 (20.2%) IPR005749 (20%)" "Large ribosomal subunit protein uL15/eL18 superfamily (20.2%) Large ribosomal subunit protein uL15/eL18 (20.2%) Large ribosomal subunit protein uL15, bacteria (20%)" SEVRLPDGVLR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000244 (14.3%) IPR009027 (14.3%) IPR020069 (14.3%)" "Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.3%) Large ribosomal subunit protein bL9, C-terminal (14.3%)" NDRFSEDLSNR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005975 (50%) "GO:0003824 (28.6%) GO:0016787 (14.3%) GO:0016798 (7.1%)" carbohydrate metabolic process (50%) "catalytic activity (28.6%) hydrolase activity (14.3%) hydrolase activity, acting on glycosyl bonds (7.1%)" "IPR004300 (33.3%) IPR011330 (33.3%) IPR052046 (33.3%)" "Glycoside hydrolase family 57, N-terminal domain (33.3%) Glycoside hydrolase/deacetylase, beta/alpha-barrel (33.3%) Glycosyl hydrolase family 57 (33.3%)" NGLCTMVAFNK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" ANAIAPGFIITDMTAGLSEEVKTEWAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) GO:0006633 (33.3%) "GO:0004316 (33.3%) GO:0051287 (33.3%)" fatty acid biosynthetic process (33.3%) "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33.3%) NAD binding (33.3%)" "IPR002347 (16.7%) IPR011284 (16.7%) IPR020904 (16.7%)" "Short-chain dehydrogenase/reductase SDR (16.7%) 3-oxoacyl-(acyl-carrier-protein) reductase (16.7%) Short-chain dehydrogenase/reductase, conserved site (16.7%)" YLTEQEVNFLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" TGDEVNPEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR002130 (24.1%) IPR020892 (24.1%) IPR044666 (24.1%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (24.1%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site (24.1%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like (24.1%)" VGSGPFPTELFDEVGDK Bacteria Bacteria 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.8%) GO:0046040 (16.8%)" GO:0005737 (16.8%) "GO:0004019 (16.8%) GO:0000287 (16%) GO:0005525 (16%)" "'de novo' AMP biosynthetic process (16.8%) IMP metabolic process (16.8%)" cytoplasm (16.8%) "adenylosuccinate synthase activity (16.8%) magnesium ion binding (16%) GTP binding (16%)" "IPR001114 (15.3%) IPR027417 (15.3%) IPR042111 (15.3%)" "Adenylosuccinate synthetase (15.3%) P-loop containing nucleoside triphosphate hydrolase (15.3%) Adenylosuccinate synthetase, domain 3 (15.3%)" YKDLGLVNTR Bacteria Bacteria "4.1.2.13 (98.3%) 4.1.2.- (1.7%)" "fructose-bisphosphate aldolase (98.3%) Aldehyde-lyases (1.7%)" "GO:0006096 (23.4%) GO:0030388 (23.4%) GO:0005975 (2.1%)" "GO:0008270 (25.5%) GO:0004332 (23.9%) GO:0016832 (1.6%)" "glycolytic process (23.4%) fructose 1,6-bisphosphate metabolic process (23.4%) carbohydrate metabolic process (2.1%)" "zinc ion binding (25.5%) fructose-bisphosphate aldolase activity (23.9%) aldehyde-lyase activity (1.6%)" "IPR000771 (25.5%) IPR013785 (25.5%) IPR050246 (25.5%)" "Fructose-bisphosphate aldolase, class-II (25.5%) Aldolase-type TIM barrel (25.5%) Class II Fructose-bisphosphate Aldolase (25.5%)" GFPIVLHGSSSVPQEEVETINKYGGALK Bacteria Bacteria "4.1.2.13 (87.5%) 4.1.2.- (12.5%)" "fructose-bisphosphate aldolase (87.5%) Aldehyde-lyases (12.5%)" "GO:0006096 (25%) GO:0030388 (25%)" "GO:0004332 (25%) GO:0008270 (25%)" "glycolytic process (25%) fructose 1,6-bisphosphate metabolic process (25%)" "fructose-bisphosphate aldolase activity (25%) zinc ion binding (25%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" QGKDAAEIYIGQGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0016884 (85.7%) GO:0016740 (14.3%)" "carbon-nitrogen ligase activity, with glutamine as amido-N-donor (85.7%) transferase activity (14.3%)" "IPR003789 (25%) IPR019004 (25%) IPR023168 (25%)" "Aspartyl/glutamyl-tRNA amidotransferase subunit B-like (25%) Uncharacterised protein YqeY/Aim41 (25%) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 (25%)" KVDPEQAKEINQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.79 (75%) 2.3.1.30 (25%)" "maltose O-acetyltransferase (75%) serine O-acetyltransferase (25%)" "GO:0016740 (88.1%) GO:0008925 (7.1%) GO:0009001 (2.4%)" "transferase activity (88.1%) maltose O-acetyltransferase activity (7.1%) serine O-acetyltransferase activity (2.4%)" "IPR011004 (25.2%) IPR047324 (25.2%) IPR050484 (25.2%)" "Trimeric LpxA-like superfamily (25.2%) Gamma carbonic anhydrase-like (25.2%) Transferase Hexapeptide/Carbonic Anhydrase (25.2%)" MYTELTTEHPIDLCR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (50%) GO:0004332 (50%) glycolytic process (50%) fructose-bisphosphate aldolase activity (50%) "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" LDTGSPADTDMDVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.80 (100%) fructan beta-fructosidase (100%) GO:0005987 (31.6%) "GO:0005737 (31.6%) GO:0016020 (1.3%)" "GO:0004575 (31.6%) GO:0051669 (3.9%)" sucrose catabolic process (31.6%) "cytoplasm (31.6%) membrane (1.3%)" "sucrose alpha-glucosidase activity (31.6%) fructan beta-fructosidase activity (3.9%)" "IPR001362 (16.7%) IPR013148 (16.7%) IPR013189 (16.7%)" "Glycoside hydrolase, family 32 (16.7%) Glycosyl hydrolase family 32, N-terminal (16.7%) Glycosyl hydrolase family 32, C-terminal (16.7%)" RINTQCTFVENPLDALIPSLK root 3.6.3.21 (100%) Transferred entry: 7.4.2.1 (100%) "GO:0006865 (48.8%) GO:1903810 (0.1%)" "GO:0030288 (50.4%) GO:0016020 (0.1%) GO:0042597 (0.1%)" "GO:0005524 (0.2%) GO:0016597 (0.2%) GO:0016787 (0.1%)" "amino acid transport (48.8%) L-histidine import across plasma membrane (0.1%)" "outer membrane-bounded periplasmic space (50.4%) membrane (0.1%) periplasmic space (0.1%)" "ATP binding (0.2%) amino acid binding (0.2%) hydrolase activity (0.1%)" "IPR001638 (34.1%) IPR018313 (33.8%) IPR005768 (32.1%)" "Solute-binding protein family 3/N-terminal domain of MltF (34.1%) Solute-binding protein family 3, conserved site (33.8%) Specific amino acids and opine-binding periplasmic protein, ABC transporter (32.1%)" ALEGTVAGLQASAASGQPGTDATIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR008969 (14.3%) IPR012910 (14.3%) IPR023996 (14.3%)" "Carboxypeptidase-like, regulatory domain superfamily (14.3%) TonB-dependent receptor, plug domain (14.3%) TonB-dependent outer membrane protein, SusC/RagA (14.3%)" ALQSLSDHLFNNK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.2%) GO:0009090 (17.2%) GO:0009088 (14.1%)" GO:0005829 (17.2%) "GO:0004072 (17.2%) GO:0005524 (17.2%)" "lysine biosynthetic process via diaminopimelate (17.2%) homoserine biosynthetic process (17.2%) threonine biosynthetic process (14.1%)" cytosol (17.2%) "aspartate kinase activity (17.2%) ATP binding (17.2%)" "IPR045865 (13%) IPR047962 (13%) IPR054352 (13%)" "ACT-like domain (13%) Lysine-sensitive aspartokinase 3, ACT2 domain (13%) Aspartokinase, ACT domain (13%)" IYQASTSELYGLVQEVPQR Bacteria Bacteria 4.2.1.47 (100%) GDP-mannose 4,6-dehydratase (100%) GO:0042351 (33.5%) "GO:0008446 (33.5%) GO:0070401 (32.9%)" 'de novo' GDP-L-fucose biosynthetic process (33.5%) "GDP-mannose 4,6-dehydratase activity (33.5%) NADP+ binding (32.9%)" "IPR006368 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "GDP-mannose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" RFKDGDTITVEPWR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.3.99.1 (75%) 1.3.5.1 (25%)" "Deleted entry (75%) succinate dehydrogenase (25%)" "GO:0009060 (24.5%) GO:0022904 (24.5%)" "GO:0009055 (24.5%) GO:0051537 (24.5%) GO:0016491 (1.3%)" "aerobic respiration (24.5%) respiratory electron transport chain (24.5%)" "electron transfer activity (24.5%) 2 iron, 2 sulfur cluster binding (24.5%) oxidoreductase activity (1.3%)" "IPR006058 (14.3%) IPR009051 (14.3%) IPR012675 (14.3%)" "2Fe-2S ferredoxin, iron-sulphur binding site (14.3%) Alpha-helical ferredoxin (14.3%) Beta-grasp domain superfamily (14.3%)" YFDFEVPTALPGVDPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.2%) GO:0005829 (18.2%) "GO:0004612 (18.2%) GO:0005524 (18.2%) GO:0046872 (18.2%)" gluconeogenesis (18.2%) cytosol (18.2%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.2%) ATP binding (18.2%) metal ion binding (18.2%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" AIQIGDKVPEFLGTDQDGKEVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) "GO:0034599 (25%) GO:0045454 (25%)" GO:0005737 (25%) GO:0008379 (25%) "cellular response to oxidative stress (25%) cell redox homeostasis (25%)" cytoplasm (25%) thioredoxin peroxidase activity (25%) "IPR000866 (20%) IPR013766 (20%) IPR024706 (20%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (20%) Thioredoxin domain (20%) Peroxiredoxin, AhpC-type (20%)" ATAFIAALNQLIAETTAAYNQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR046228 (100%) Protein of unknown function DUF6261 (100%) IEYFNPAGSVKDR root 2.5.1.47 (100%) cysteine synthase (100%) GO:0006535 (38.1%) GO:0005737 (22.3%) "GO:0004124 (37.4%) GO:0016846 (1%) GO:0016765 (0.6%)" cysteine biosynthetic process from serine (38.1%) cytoplasm (22.3%) "cysteine synthase activity (37.4%) carbon-sulfur lyase activity (1%) transferase activity, transferring alkyl or aryl (other than methyl) groups (0.6%)" "IPR001216 (16.7%) IPR001926 (16.7%) IPR050214 (16.7%)" "Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site (16.7%) Tryptophan synthase beta chain-like, PALP domain (16.7%) Cysteine synthase/Cystathionine beta-synthase (16.7%)" VIGVGGGGGNAVEHMVR root 3.4.24.- (100%) Metalloendopeptidases (100%) "GO:0000917 (14.1%) GO:0043093 (13.9%) GO:0051258 (13.9%)" "GO:0005737 (14.3%) GO:0032153 (14.3%) GO:0005886 (0%)" "GO:0003924 (14.4%) GO:0005525 (14.4%) GO:0016787 (0%)" "division septum assembly (14.1%) FtsZ-dependent cytokinesis (13.9%) protein polymerization (13.9%)" "cytoplasm (14.3%) cell division site (14.3%) plasma membrane (0%)" "GTPase activity (14.4%) GTP binding (14.4%) hydrolase activity (0%)" "IPR036525 (11.3%) IPR045061 (11.3%) IPR003008 (11.3%)" "Tubulin/FtsZ, GTPase domain superfamily (11.3%) Tubulin-like protein FtsZ/CetZ (11.3%) Tubulin/FtsZ, GTPase domain (11.3%)" LVGAPPGYVGYEEGGYLTEAVRR root "3.4.21.- (50%) 3.6.1.15 (50%)" "Serine endopeptidases (50%) nucleoside-triphosphate phosphatase (50%)" "GO:0034605 (16.8%) GO:0042026 (16%) GO:0006508 (1.3%)" "GO:0005829 (14.2%) GO:0005737 (2.6%) GO:0005759 (0%)" "GO:0005524 (16.8%) GO:0016887 (16.8%) GO:0042802 (14.2%)" "cellular response to heat (16.8%) protein refolding (16%) proteolysis (1.3%)" "cytosol (14.2%) cytoplasm (2.6%) mitochondrial matrix (0%)" "ATP binding (16.8%) ATP hydrolysis activity (16.8%) identical protein binding (14.2%)" "IPR003959 (8.5%) IPR050130 (8.5%) IPR027417 (8.5%)" "ATPase, AAA-type, core (8.5%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.5%) P-loop containing nucleoside triphosphate hydrolase (8.5%)" RLVDVSHDVIVNEEDCGTLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.1%) GO:0000428 (17.1%) "GO:0003677 (17.1%) GO:0003899 (17.1%) GO:0000287 (15.2%)" DNA-templated transcription (17.1%) DNA-directed RNA polymerase complex (17.1%) "DNA binding (17.1%) DNA-directed RNA polymerase activity (17.1%) magnesium ion binding (15.2%)" "IPR007081 (9.5%) IPR045867 (9.5%) IPR000722 (9%)" "RNA polymerase Rpb1, domain 5 (9.5%) DNA-directed RNA polymerase, subunit beta-prime (9.5%) RNA polymerase, alpha subunit (9%)" FQGGPNAGHTLEFEGQK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0004019 (16.7%) GO:0005525 (16.7%) GO:0000287 (15.8%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "adenylosuccinate synthase activity (16.7%) GTP binding (16.7%) magnesium ion binding (15.8%)" "IPR001114 (14.5%) IPR027417 (14.5%) IPR042109 (14.5%)" "Adenylosuccinate synthetase (14.5%) P-loop containing nucleoside triphosphate hydrolase (14.5%) Adenylosuccinate synthetase, domain 1 (14.5%)" IGKLEFPDAILK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.3%) GO:0043335 (16.3%) GO:0051083 (16.3%)" "GO:0003755 (16.3%) GO:0043022 (16.3%) GO:0044183 (16.3%)" "protein transport (16.3%) protein unfolding (16.3%) 'de novo' cotranslational protein folding (16.3%)" "peptidyl-prolyl cis-trans isomerase activity (16.3%) ribosome binding (16.3%) protein folding chaperone (16.3%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" EAPGQPEPVR root "GO:0015920 (23.1%) GO:0043165 (23.1%) GO:0061024 (0.8%)" "GO:1990351 (26.6%) GO:0009279 (26.4%)" "lipopolysaccharide transport (23.1%) Gram-negative-bacterium-type cell outer membrane assembly (23.1%) membrane organization (0.8%)" "transporter complex (26.6%) cell outer membrane (26.4%)" "IPR050218 (26.5%) IPR005653 (26.4%) IPR007543 (23.9%)" "Lipopolysaccharide Assembly Protein LptD (26.5%) Organic solvent tolerance-like, N-terminal (26.4%) LptD, C-terminal (23.9%)" KLEELGIGRPSTYAPTISTIQQR Bacteroidota Bacteria Pseudomonadati Bacteroidota "5.6.2.1 (99.7%) 5.99.1.2 (0.3%)" "DNA topoisomerase (99.7%) Transferred entry: 5.6.2.1 (0.3%)" "GO:0006265 (25%) GO:0007059 (0.1%)" "GO:0003677 (25%) GO:0003917 (25%) GO:0046872 (24.7%)" "DNA topological change (25%) chromosome segregation (0.1%)" "DNA binding (25%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25%) metal ion binding (24.7%)" "IPR000380 (7.2%) IPR003602 (7.2%) IPR013497 (7.2%)" "DNA topoisomerase, type IA (7.2%) DNA topoisomerase, type IA, DNA-binding domain (7.2%) DNA topoisomerase, type IA, central (7.2%)" MENLKNVAPIEDFNWDAYENGESFAGASHEELEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" VYRIDAMDAANEMNNAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.3 (56.3%) 1.2.7.1 (43.8%)" "2-oxoglutarate synthase (56.3%) pyruvate synthase (43.8%)" "GO:0016903 (76.4%) GO:0047553 (12.5%) GO:0019164 (11.1%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (76.4%) 2-oxoglutarate synthase activity (12.5%) pyruvate synthase activity (11.1%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" QVTMDFSYDQLGGVPGGDAYAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.49 (100%) glucose-6-phosphate dehydrogenase (NADP(+)) (100%) "GO:0006006 (20%) GO:0009051 (20%)" GO:0005829 (20%) "GO:0004345 (20%) GO:0050661 (20%)" "glucose metabolic process (20%) pentose-phosphate shunt, oxidative branch (20%)" cytosol (20%) "glucose-6-phosphate dehydrogenase activity (20%) NADP binding (20%)" "IPR001282 (20%) IPR019796 (20%) IPR022674 (20%)" "Glucose-6-phosphate dehydrogenase (20%) Glucose-6-phosphate dehydrogenase, active site (20%) Glucose-6-phosphate dehydrogenase, NAD-binding (20%)" ILDPRDTYADPAQWNEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.7%) GO:0005829 (17.7%) "GO:0004612 (17.7%) GO:0005524 (17.7%) GO:0046872 (16.5%)" gluconeogenesis (17.7%) cytosol (17.7%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.7%) ATP binding (17.7%) metal ion binding (16.5%)" "IPR001272 (25.9%) IPR013035 (25.9%) IPR008210 (24.1%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.9%) Phosphoenolpyruvate carboxykinase, C-terminal (25.9%) Phosphoenolpyruvate carboxykinase, N-terminal (24.1%)" VVDIEAATVKPYNER Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus NMITGAAQMDGAILVVAATDGPMPQTR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0006414 (0%) GO:0032790 (0%) GO:0046677 (0%)" "GO:0005829 (18.1%) GO:0032045 (6.3%) GO:0005886 (0.4%)" "GO:0003746 (18.5%) GO:0003924 (18.4%) GO:0005525 (18.4%)" "translational elongation (0%) ribosome disassembly (0%) response to antibiotic (0%)" "cytosol (18.1%) guanyl-nucleotide exchange factor complex (6.3%) plasma membrane (0.4%)" "translation elongation factor activity (18.5%) GTPase activity (18.4%) GTP binding (18.4%)" "IPR000795 (9.6%) IPR050055 (9.6%) IPR027417 (9.6%)" "Translational (tr)-type GTP-binding domain (9.6%) Elongation factor Tu GTPase (9.6%) P-loop containing nucleoside triphosphate hydrolase (9.6%)" CDVDENSDLPAEFGIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" VAEINADTKNYK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" YLGPARDNMEK Bacteria Bacteria "4.1.2.13 (98.6%) 4.1.2.- (1.4%)" "fructose-bisphosphate aldolase (98.6%) Aldehyde-lyases (1.4%)" "GO:0006096 (24.7%) GO:0030388 (24.7%) GO:0005975 (0.3%)" GO:0016020 (0.2%) "GO:0008270 (25%) GO:0004332 (24.7%) GO:0016832 (0.3%)" "glycolytic process (24.7%) fructose 1,6-bisphosphate metabolic process (24.7%) carbohydrate metabolic process (0.3%)" membrane (0.2%) "zinc ion binding (25%) fructose-bisphosphate aldolase activity (24.7%) aldehyde-lyase activity (0.3%)" "IPR000771 (25.1%) IPR013785 (25.1%) IPR050246 (25.1%)" "Fructose-bisphosphate aldolase, class-II (25.1%) Aldolase-type TIM barrel (25.1%) Class II Fructose-bisphosphate Aldolase (25.1%)" AYETMQSVNDNFHALYPEGR Escherichia coli Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli TPKPIAQALAEGK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0005829 (10.9%) GO:0009295 (10.9%) GO:0032993 (10.9%)" "GO:0000976 (10.9%) GO:0001217 (10.9%) GO:0003680 (10.9%)" "cytosol (10.9%) nucleoid (10.9%) protein-DNA complex (10.9%)" "transcription cis-regulatory region binding (10.9%) DNA-binding transcription repressor activity (10.9%) minor groove of adenine-thymine-rich DNA binding (10.9%)" "IPR027444 (20.3%) IPR037150 (20.3%) IPR001801 (19.8%)" "DNA-binding protein H-NS-like, C-terminal domain (20.3%) Histone-like protein H-NS, C-terminal domain superfamily (20.3%) DNA-binding protein H-NS-like (19.8%)" AEDGTPCCEWVGPGGAGHYVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" HTTQPEMGHFKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000597 (25%) IPR009000 (25%) IPR019926 (25%)" "Large ribosomal subunit protein uL3 (25%) Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, conserved site (25%)" NPVIISSSGLTNSAAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.3.1.1 (94.7%) 1.3.98.1 (5.3%)" "dihydrouracil dehydrogenase (NAD(+)) (94.7%) dihydroorotate oxidase (fumarate) (5.3%)" "GO:0006210 (13.5%) GO:0006212 (13.5%) GO:0044205 (11.9%)" GO:0005737 (14.3%) "GO:0002058 (13.5%) GO:0004152 (13.5%) GO:0050661 (13.5%)" "thymine catabolic process (13.5%) uracil catabolic process (13.5%) 'de novo' UMP biosynthetic process (11.9%)" cytoplasm (14.3%) "uracil binding (13.5%) dihydroorotate dehydrogenase activity (13.5%) NADP binding (13.5%)" "IPR005720 (32.8%) IPR012135 (32.8%) IPR013785 (32.8%)" "Dihydroorotate dehydrogenase, catalytic (32.8%) Dihydroorotate dehydrogenase, class 1/ 2 (32.8%) Aldolase-type TIM barrel (32.8%)" GVWNVEEFDPDPFMEQLNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.5.1.7 (41.7%) 1.-.-.- (33.3%) 1.5.1.43 (25%)" "saccharopine dehydrogenase (NAD(+), L-lysine-forming) (41.7%) Oxidoreductases (33.3%) carboxynorspermidine synthase (25%)" "GO:0004754 (41.7%) GO:0016491 (41.7%) GO:0102143 (16.7%)" "saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (41.7%) oxidoreductase activity (41.7%) carboxynorspermidine dehydrogenase activity (16.7%)" "IPR032095 (34.1%) IPR005097 (33.2%) IPR036291 (32.7%)" "Saccharopine dehydrogenase-like, C-terminal (34.1%) Saccharopine dehydrogenase, NADP binding domain (33.2%) NAD(P)-binding domain superfamily (32.7%)" ELTSAYVGIDPTADSLHIGHLVSVMMLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.9%) GO:0005829 (16.9%) "GO:0003723 (16.9%) GO:0004831 (16.9%) GO:0005524 (16.9%)" tyrosyl-tRNA aminoacylation (16.9%) cytosol (16.9%) "RNA binding (16.9%) tyrosine-tRNA ligase activity (16.9%) ATP binding (16.9%)" "IPR001412 (12.5%) IPR002305 (12.5%) IPR002307 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Aminoacyl-tRNA synthetase, class Ic (12.5%) Tyrosine-tRNA ligase (12.5%)" ETMKEIDPELQILAFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" GQAHWEGDIKR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "1.11.1.15 (51.7%) 1.11.1.29 (27.6%) 1.11.1.24 (13.8%)" "Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (51.7%) mycoredoxin-dependent peroxiredoxin (27.6%) thioredoxin-dependent peroxiredoxin (13.8%)" "GO:0006979 (33.8%) GO:0006972 (0.1%) GO:0033194 (0.1%)" "GO:0005737 (31.6%) GO:0005829 (0.1%)" "GO:0004601 (32.3%) GO:0051920 (1.8%) GO:0140824 (0.1%)" "response to oxidative stress (33.8%) hyperosmotic response (0.1%) response to hydroperoxide (0.1%)" "cytoplasm (31.6%) cytosol (0.1%)" "peroxidase activity (32.3%) peroxiredoxin activity (1.8%) thioredoxin-dependent peroxiredoxin activity (0.1%)" "IPR015946 (20.2%) IPR036102 (20%) IPR052707 (20%)" "K homology domain-like, alpha/beta (20.2%) OsmC/Ohr superfamily (20%) OsmC/Ohr Peroxiredoxin (20%)" NALTEANGDIDKAMEIIRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (48.6%) GO:0003746 (51.4%) cytoplasm (48.6%) translation elongation factor activity (51.4%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" DAVPGTDFMPLQVEYKEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.3%) GO:0006396 (14.2%) GO:0006401 (0.1%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "mRNA catabolic process (14.3%) RNA processing (14.2%) RNA catabolic process (0.1%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (8%) IPR012162 (8%) IPR015847 (8%)" "Exoribonuclease, phosphorolytic domain 1 (8%) Polyribonucleotide nucleotidyltransferase (8%) Exoribonuclease, phosphorolytic domain 2 (8%)" VTKDNLFPIPPLFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.3.1 (100%) phosphoribosylformylglycinamidine cyclo-ligase (100%) "GO:0006189 (16.3%) GO:0046084 (16.3%)" GO:0005829 (16.3%) "GO:0004637 (16.3%) GO:0004641 (16.3%) GO:0005524 (16.3%)" "'de novo' IMP biosynthetic process (16.3%) adenine biosynthetic process (16.3%)" cytosol (16.3%) "phosphoribosylamine-glycine ligase activity (16.3%) phosphoribosylformylglycinamidine cyclo-ligase activity (16.3%) ATP binding (16.3%)" "IPR004733 (20%) IPR010918 (20%) IPR016188 (20%)" "Phosphoribosylformylglycinamidine cyclo-ligase (20%) PurM-like, C-terminal domain (20%) PurM-like, N-terminal domain (20%)" GLSTAVGDEGGFAPNLEGTEDALNSILAAIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0005576 (16.7%) GO:0000015 (16.5%) GO:0009986 (16.2%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.4%)" glycolytic process (16.7%) "extracellular region (16.7%) phosphopyruvate hydratase complex (16.5%) cell surface (16.2%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.4%)" "IPR000941 (16.7%) IPR020810 (16.7%) IPR029017 (16.7%)" "Enolase (16.7%) Enolase, C-terminal TIM barrel domain (16.7%) Enolase-like, N-terminal (16.7%)" LVPHQEAPTNVCWGDR root "6.3.1.2 (80%) 6.3.1.- (20%)" "glutamine synthetase (80%) Acid--ammonia (or amine) ligases (amide synthases) (20%)" "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" DHPQVMNAAVR Pseudomonadati Bacteria Pseudomonadati 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (31.3%) GO:1902600 (31.3%) GO:0006811 (1.3%)" "GO:0005524 (32.4%) GO:0016787 (3.7%)" "ATP metabolic process (31.3%) proton transmembrane transport (31.3%) monoatomic ion transport (1.3%)" "ATP binding (32.4%) hydrolase activity (3.7%)" "IPR022879 (20.2%) IPR055190 (20.2%) IPR000194 (20.1%)" "V-type ATP synthase regulatory subunit B/beta (20.2%) ATP synthase A/B type, C-terminal domain (20.2%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.1%)" NVALEEQAVEAVLAK root "5.2.1.8 (99.9%) 3.4.21.92 (0.1%)" "peptidylprolyl isomerase (99.9%) endopeptidase Clp (0.1%)" "GO:0015031 (12.7%) GO:0051301 (12.4%) GO:0043335 (12%)" "GO:0005737 (12.3%) GO:0005759 (0%) GO:0005829 (0%)" "GO:0003755 (12.7%) GO:0043022 (12%) GO:0044183 (12%)" "protein transport (12.7%) cell division (12.4%) protein unfolding (12%)" "cytoplasm (12.3%) mitochondrial matrix (0%) cytosol (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.7%) ribosome binding (12%) protein folding chaperone (12%)" "IPR027304 (12.8%) IPR037041 (12.8%) IPR008880 (12.7%)" "Trigger factor/SurA domain superfamily (12.8%) Trigger factor, C-terminal domain superfamily (12.8%) Trigger factor, C-terminal (12.7%)" IELSQEVSIFNIAEFLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006811 (25%) "GO:0009279 (25%) GO:0046930 (25%)" GO:0015288 (25%) monoatomic ion transport (25%) "cell outer membrane (25%) pore complex (25%)" porin activity (25%) "IPR006664 (19.4%) IPR006665 (19.4%) IPR011250 (19.4%)" "Outer membrane protein, bacterial (19.4%) OmpA-like domain (19.4%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (19.4%)" TLEEAGAEVELK Pseudomonadati Bacteria Pseudomonadati GO:0006412 (25%) "GO:0022625 (24.8%) GO:0005840 (0.5%)" "GO:0003735 (25%) GO:0003729 (24.8%)" translation (25%) "cytosolic large ribosomal subunit (24.8%) ribosome (0.5%)" "structural constituent of ribosome (25%) mRNA binding (24.8%)" "IPR013823 (20.2%) IPR014719 (20.2%) IPR000206 (20%)" "Large ribosomal subunit protein bL12, C-terminal (20.2%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20.2%) Large ribosomal subunit protein bL12 (20%)" FVGTGEKLDAIDQFHPAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.5.4 (100%) signal-recognition-particle GTPase (100%) GO:0006614 (19.9%) GO:0048500 (19.9%) "GO:0003924 (19.9%) GO:0005525 (19.9%) GO:0008312 (19.9%)" SRP-dependent cotranslational protein targeting to membrane (19.9%) signal recognition particle (19.9%) "GTPase activity (19.9%) GTP binding (19.9%) 7S RNA binding (19.9%)" "IPR000897 (11.2%) IPR004125 (11.2%) IPR022941 (11.2%)" "Signal recognition particle, SRP54 subunit, GTPase domain (11.2%) Signal recognition particle, SRP54 subunit, M-domain (11.2%) Signal recognition particle, SRP54 subunit (11.2%)" GFIDVFDEEAHKLKDVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (12.9%) IPR014729 (12.9%) IPR025777 (12.9%)" "GMP synthase, C-terminal (12.9%) Rossmann-like alpha/beta/alpha sandwich fold (12.9%) GMP synthetase ATP pyrophosphatase domain (12.9%)" GRESEFAFLELLEER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (25%) "GO:0036440 (22.7%) GO:0046912 (2.3%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (25%) "citrate synthase activity (22.7%) acyltransferase activity, acyl groups converted into alkyl on transfer (2.3%)" "IPR002020 (20%) IPR016142 (20%) IPR016143 (20%)" "Citrate synthase (20%) Citrate synthase-like, large alpha subdomain (20%) Citrate synthase-like, small alpha subdomain (20%)" MKASEVLDNLKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006537 (25.6%) GO:0005829 (24.4%) "GO:0004354 (25.6%) GO:0000166 (24.4%)" glutamate biosynthetic process (25.6%) cytosol (24.4%) "glutamate dehydrogenase (NADP+) activity (25.6%) nucleotide binding (24.4%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" YCEYLRDVCEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.6%) GO:0006044 (32.6%)" "GO:0004342 (32.6%) GO:0016853 (2.3%)" "carbohydrate metabolic process (32.6%) N-acetylglucosamine metabolic process (32.6%)" "glucosamine-6-phosphate deaminase activity (32.6%) isomerase activity (2.3%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" AAAAAPQAQHGQSASAVSSDASVEVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0005737 (33.3%) "GO:0016407 (33.3%) GO:0031405 (33.3%)" cytoplasm (33.3%) "acetyltransferase activity (33.3%) lipoic acid binding (33.3%)" "IPR000089 (12.5%) IPR001078 (12.5%) IPR003016 (12.5%)" "Biotin/lipoyl attachment (12.5%) 2-oxoacid dehydrogenase acyltransferase, catalytic domain (12.5%) 2-oxo acid dehydrogenase, lipoyl-binding site (12.5%)" EQVEDEANVLNIVSHLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.2%) GO:0006879 (14.2%)" "GO:0005829 (14.2%) GO:0005737 (0.5%)" "GO:0004322 (14.2%) GO:0008198 (14.2%) GO:0008199 (14.2%)" "iron ion transport (14.2%) intracellular iron ion homeostasis (14.2%)" "cytosol (14.2%) cytoplasm (0.5%)" "ferroxidase activity (14.2%) ferrous iron binding (14.2%) ferric iron binding (14.2%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" DMHVGDTIIGIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.4.5 (100%) argininosuccinate synthase (100%) "GO:0006526 (16.6%) GO:0000050 (16.5%) GO:0000053 (16.5%)" GO:0005737 (16.5%) "GO:0004055 (16.6%) GO:0005524 (16.5%) GO:0016740 (0.6%)" "L-arginine biosynthetic process (16.6%) urea cycle (16.5%) argininosuccinate metabolic process (16.5%)" cytoplasm (16.5%) "argininosuccinate synthase activity (16.6%) ATP binding (16.5%) transferase activity (0.6%)" "IPR024074 (14.4%) IPR048268 (14.4%) IPR001518 (14.4%)" "Argininosuccinate synthetase, catalytic/multimerisation domain body (14.4%) Arginosuccinate synthase C-terminal domain (14.4%) Argininosuccinate synthase (14.4%)" IVPDRESLGVFTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006089 (33.7%) "GO:0046872 (32.6%) GO:0051539 (32.6%) GO:0051536 (1.2%)" lactate metabolic process (33.7%) "metal ion binding (32.6%) 4 iron, 4 sulfur cluster binding (32.6%) iron-sulfur cluster binding (1.2%)" "IPR003741 (14.8%) IPR004452 (14.8%) IPR017896 (14.3%)" "LUD domain (14.8%) L-lactate oxidation iron-sulfur protein LutB/LldF (14.8%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14.3%)" WKPEGGVPDVLEIPAEEMDK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.7%) IPR000795 (7.7%) IPR005225 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%)" GRNLFGYNPYPDEIIEGFCR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "6.4.1.7 (75%) 2.1.3.1 (25%)" "2-oxoglutarate carboxylase (75%) methylmalonyl-CoA carboxytransferase (25%)" GO:0006094 (31.4%) GO:0005737 (31.4%) "GO:0004736 (31.4%) GO:0034029 (3.9%) GO:0047154 (2%)" gluconeogenesis (31.4%) cytoplasm (31.4%) "pyruvate carboxylase activity (31.4%) 2-oxoglutarate carboxylase activity (3.9%) methylmalonyl-CoA carboxytransferase activity (2%)" "IPR000891 (25%) IPR003379 (25%) IPR013785 (25%)" "Pyruvate carboxyltransferase (25%) Carboxylase, conserved domain (25%) Aldolase-type TIM barrel (25%)" TVAVSGFGNVAWGAVTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (25.6%) GO:0005829 (25.6%) "GO:0004354 (25.6%) GO:0000166 (23.3%)" glutamate biosynthetic process (25.6%) cytosol (25.6%) "glutamate dehydrogenase (NADP+) activity (25.6%) nucleotide binding (23.3%)" "IPR006095 (11.3%) IPR006096 (11.3%) IPR006097 (11.3%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.3%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.3%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.3%)" TLTVDPAWANLPDDAKVENNDPAFINEVVRPINAQDGDLLPVSAFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.7.1 (72.7%) 1.2.7.- (27.3%)" "pyruvate synthase (72.7%) With an iron-sulfur protein as acceptor (27.3%)" "GO:0006979 (15.4%) GO:0022900 (15.4%) GO:0044281 (7.7%)" "GO:0005506 (15.4%) GO:0030976 (15.4%) GO:0051539 (15.4%)" "response to oxidative stress (15.4%) electron transport chain (15.4%) small molecule metabolic process (7.7%)" "iron ion binding (15.4%) thiamine pyrophosphate binding (15.4%) 4 iron, 4 sulfur cluster binding (15.4%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" VVYEELVPEITTEPNYDAALAALK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" AVLEVAGVHNVLAK root "GO:0006412 (16.8%) GO:0042254 (15.8%) GO:0002181 (0.1%)" "GO:0015935 (16.5%) GO:0005737 (16%) GO:0005840 (0.5%)" "GO:0003735 (16.9%) GO:0019843 (16.6%) GO:0003723 (0.2%)" "translation (16.8%) ribosome biogenesis (15.8%) cytoplasmic translation (0.1%)" "small ribosomal subunit (16.5%) cytoplasm (16%) ribosome (0.5%)" "structural constituent of ribosome (16.9%) rRNA binding (16.6%) RNA binding (0.2%)" "IPR005324 (14.3%) IPR014721 (14.3%) IPR020568 (14.3%)" "Small ribosomal subunit protein uS5, C-terminal (14.3%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (14.3%) Ribosomal protein uS5 domain 2-type superfamily (14.3%)" DGDEIKGNQVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006281 (12.9%) GO:0006310 (12.9%) GO:0009432 (11.3%)" GO:0005829 (12.9%) "GO:0003697 (12.9%) GO:0005524 (12.9%) GO:0140664 (12.9%)" "DNA repair (12.9%) DNA recombination (12.9%) SOS response (11.3%)" cytosol (12.9%) "single-stranded DNA binding (12.9%) ATP binding (12.9%) ATP-dependent DNA damage sensor activity (12.9%)" "IPR013765 (11.6%) IPR020584 (11.6%) IPR020587 (11.6%)" "DNA recombination and repair protein RecA (11.6%) DNA recombination/repair protein RecA, conserved site (11.6%) DNA recombination and repair protein RecA, monomer-monomer interface (11.6%)" DGQSCPVTCGMPSALVSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.-.- (100%) Acting on peptide bonds (peptidases) (100%) GO:0006508 (33.3%) GO:0005829 (33.3%) GO:0008237 (33.3%) proteolysis (33.3%) cytosol (33.3%) metallopeptidase activity (33.3%) "IPR036059 (14%) IPR045569 (14%) IPR051463 (14%)" "Metalloprotease TldD/PmbA superfamily (14%) Metalloprotease TldD/E, C-terminal domain (14%) Peptidase U62 metalloprotease (14%)" AGLGYVHNSLSNMQPQVAMWR Bacteria Bacteria "GO:0043165 (32.7%) GO:0051205 (32.7%) GO:0007155 (0.2%)" "GO:1990063 (32.7%) GO:0019867 (1.2%) GO:0009279 (0.2%)" "Gram-negative-bacterium-type cell outer membrane assembly (32.7%) protein insertion into membrane (32.7%) cell adhesion (0.2%)" "Bam protein complex (32.7%) outer membrane (1.2%) cell outer membrane (0.2%)" "IPR000184 (21.1%) IPR039910 (20.3%) IPR023707 (20%)" "Bacterial surface antigen (D15) (21.1%) Surface antigen D15-like (20.3%) Outer membrane protein assembly factor BamA (20%)" IIQAVQPDEIYNLAAQSHVK Pseudomonadati Bacteria Pseudomonadati 4.2.1.47 (100%) GDP-mannose 4,6-dehydratase (100%) GO:0042351 (33.3%) "GO:0008446 (33.3%) GO:0070401 (33.3%)" 'de novo' GDP-L-fucose biosynthetic process (33.3%) "GDP-mannose 4,6-dehydratase activity (33.3%) NADP+ binding (33.3%)" "IPR006368 (33.3%) IPR016040 (33.3%) IPR036291 (33.3%)" "GDP-mannose 4,6-dehydratase (33.3%) NAD(P)-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" LIDLAFAEDIGDGDHTTLSCIPATAMGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.2.19 (100%) nicotinate-nucleotide diphosphorylase (carboxylating) (100%) "GO:0009435 (24.9%) GO:0034213 (24.9%)" GO:0005737 (24.9%) "GO:0004514 (24.9%) GO:0016757 (0.6%)" "NAD+ biosynthetic process (24.9%) quinolinate catabolic process (24.9%)" cytoplasm (24.9%) "nicotinate-nucleotide diphosphorylase (carboxylating) activity (24.9%) glycosyltransferase activity (0.6%)" "IPR002638 (14.3%) IPR004393 (14.3%) IPR013785 (14.3%)" "Quinolinate phosphoribosyl transferase, C-terminal (14.3%) Nicotinate-nucleotide pyrophosphorylase (14.3%) Aldolase-type TIM barrel (14.3%)" LGIAAQSVGISQAAYNEGLAYAKDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.8.1 (68.8%) 1.3.99.- (18.8%) 1.3.8.- (12.5%)" "short-chain acyl-CoA dehydrogenase (68.8%) With other acceptors (18.8%) With a flavin as acceptor (12.5%)" "GO:0050660 (49.5%) GO:0003995 (44.8%) GO:0016937 (5.2%)" "flavin adenine dinucleotide binding (49.5%) acyl-CoA dehydrogenase activity (44.8%) short-chain fatty acyl-CoA dehydrogenase activity (5.2%)" "IPR009075 (9.2%) IPR009100 (9.2%) IPR036250 (9.2%)" "Acyl-CoA dehydrogenase/oxidase, C-terminal (9.2%) Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily (9.2%) Acyl-CoA dehydrogenase-like, C-terminal (9.2%)" TPSKGVNPDEVVAVGAAVQGAVLTDEIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0042026 (0.5%) GO:0051085 (0.5%)" "GO:0005524 (32.4%) GO:0051082 (32.4%) GO:0140662 (32.4%)" "protein refolding (0.5%) obsolete chaperone cofactor-dependent protein refolding (0.5%)" "ATP binding (32.4%) unfolded protein binding (32.4%) ATP-dependent protein folding chaperone (32.4%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" HIGSVASFFVSR Bacteria Bacteria "2.2.1.2 (99.4%) 5.3.1.9 (0.6%)" "transaldolase (99.4%) glucose-6-phosphate isomerase (0.6%)" "GO:0006098 (24.6%) GO:0005975 (24.1%) GO:0006094 (0.5%)" GO:0005737 (24.6%) "GO:0004801 (24.6%) GO:0004347 (0.5%) GO:0097367 (0.5%)" "pentose-phosphate shunt (24.6%) carbohydrate metabolic process (24.1%) gluconeogenesis (0.5%)" cytoplasm (24.6%) "transaldolase activity (24.6%) glucose-6-phosphate isomerase activity (0.5%) carbohydrate derivative binding (0.5%)" "IPR001585 (25.1%) IPR004732 (25.1%) IPR013785 (25.1%)" "Transaldolase/Fructose-6-phosphate aldolase (25.1%) Transaldolase type 2 (25.1%) Aldolase-type TIM barrel (25.1%)" LVVMHSVQDGQADRR root 2.5.1.15 (100%) dihydropteroate synthase (100%) "GO:0046654 (20%) GO:0046656 (18.4%) GO:0042558 (1.3%)" "GO:0005829 (20%) GO:0016020 (0.1%)" "GO:0004156 (20%) GO:0046872 (18.4%) GO:0016740 (1.4%)" "tetrahydrofolate biosynthetic process (20%) folic acid biosynthetic process (18.4%) pteridine-containing compound metabolic process (1.3%)" "cytosol (20%) membrane (0.1%)" "dihydropteroate synthase activity (20%) metal ion binding (18.4%) transferase activity (1.4%)" "IPR011005 (26.3%) IPR000489 (26.1%) IPR045031 (24.5%)" "Dihydropteroate synthase-like superfamily (26.3%) Pterin-binding domain (26.1%) Dihydropteroate synthase-like (24.5%)" TIEREELHKLDECEATKVIDENGR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.4.1.13 (100%) glutamate synthase (NADPH) (100%) "GO:0051536 (48.6%) GO:0016491 (27%) GO:0004355 (21.6%)" "iron-sulfur cluster binding (48.6%) oxidoreductase activity (27%) glutamate synthase (NADPH) activity (21.6%)" "IPR001433 (10%) IPR006004 (10%) IPR009051 (10%)" "Oxidoreductase FAD/NAD(P)-binding (10%) Sulfide dehydrogenase subunit alpha-like (10%) Alpha-helical ferredoxin (10%)" IIPTENILIVTNAIYADLVKEQLPELDPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.7.7.13 (100%) mannose-1-phosphate guanylyltransferase (100%) GO:0009298 (30.4%) "GO:0004475 (30.4%) GO:0005525 (30.4%) GO:0008928 (4.3%)" GDP-mannose biosynthetic process (30.4%) "mannose-1-phosphate guanylyltransferase (GTP) activity (30.4%) GTP binding (30.4%) mannose-1-phosphate guanylyltransferase (GDP) activity (4.3%)" "IPR005835 (25%) IPR029044 (25%) IPR049577 (25%)" "Nucleotidyl transferase domain (25%) Nucleotide-diphospho-sugar transferases (25%) GDP-mannose pyrophosphorylase, N-terminal domain (25%)" TGDVGYIISGIK Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.6.5.0 (98%) 3.6.5.- (2%)" "Unknown (98%) Acting on GTP; involved in cellular and subcellular movement (2%)" GO:0045727 (16.8%) GO:0005886 (16.2%) "GO:0005525 (16.8%) GO:0043022 (16.8%) GO:0003924 (16.6%)" positive regulation of translation (16.8%) plasma membrane (16.2%) "GTP binding (16.8%) ribosome binding (16.8%) GTPase activity (16.6%)" "IPR006297 (9.5%) IPR035647 (9.5%) IPR004161 (9.4%)" "Elongation factor 4 (9.5%) EF-G domain III/V-like (9.5%) Translation elongation factor EFTu-like, domain 2 (9.4%)" VHEGDDLTNADRGSKER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.3%) "GO:0003746 (25.3%) GO:0005525 (25.3%) GO:0003924 (24.1%)" ribosome disassembly (25.3%) "translation elongation factor activity (25.3%) GTP binding (25.3%) GTPase activity (24.1%)" "IPR009000 (8%) IPR027417 (8%) IPR053905 (8%)" "Translation protein, beta-barrel domain superfamily (8%) P-loop containing nucleoside triphosphate hydrolase (8%) Elongation factor G-like, domain II (8%)" VVEEIHKDFGRIDILVNNAGITR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.100 (100%) 3-oxoacyl-[acyl-carrier-protein] reductase (100%) GO:0006633 (33.3%) "GO:0004316 (33.3%) GO:0051287 (33.3%)" fatty acid biosynthetic process (33.3%) "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (33.3%) NAD binding (33.3%)" "IPR002347 (16.7%) IPR011284 (16.7%) IPR020904 (16.7%)" "Short-chain dehydrogenase/reductase SDR (16.7%) 3-oxoacyl-(acyl-carrier-protein) reductase (16.7%) Short-chain dehydrogenase/reductase, conserved site (16.7%)" GIAVDDFAQAIKDVLEGNQTAISHQEAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0006457 (50%) GO:0003755 (50%) protein folding (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000774 (25%) IPR001179 (25%) IPR036944 (25%)" "Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal (25%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (25%) Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily (25%)" AKILVATEKPFAAVAVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (47.1%) GO:0016616 (35.3%) GO:0004617 (11.8%)" "NAD binding (47.1%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (35.3%) phosphoglycerate dehydrogenase activity (11.8%)" "IPR006139 (25%) IPR006140 (25%) IPR029752 (25%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (25%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 (25%)" RTDKVYYHHTGHIGGIK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (19.8%) GO:0017148 (19.8%) GO:0002181 (0%)" "GO:0022625 (19.8%) GO:0005840 (0.6%) GO:0005737 (0.1%)" "GO:0003735 (19.8%) GO:0003729 (19.8%) GO:0008270 (0%)" "translation (19.8%) negative regulation of translation (19.8%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (19.8%) ribosome (0.6%) cytoplasm (0.1%)" "structural constituent of ribosome (19.8%) mRNA binding (19.8%) zinc ion binding (0%)" "IPR005822 (25%) IPR005823 (25%) IPR036899 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13 superfamily (25%)" KVLADLAVNHPEAFK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0006412 (17%) GO:0000027 (14.8%)" "GO:0005840 (17%) GO:1990904 (17%)" "GO:0003735 (17%) GO:0019843 (17%)" "translation (17%) ribosomal large subunit assembly (14.8%)" "ribosome (17%) ribonucleoprotein complex (17%)" "structural constituent of ribosome (17%) rRNA binding (17%)" "IPR005813 (33.3%) IPR035566 (33.3%) IPR049946 (33.3%)" "Large ribosomal subunit protein bL20 (33.3%) Ribosomal protein bL20, C-terminal (33.3%) Large ribosomal subunit protein bL20, conserved site (33.3%)" AYYGETVEILK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" KIIDIAISELSTITGQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (16.7%) "GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" translation (16.7%) "ribosome (16.7%) ribonucleoprotein complex (16.7%)" "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR002132 (20%) IPR020930 (20%) IPR022803 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5, bacteria (20%) Large ribosomal subunit protein uL5 domain superfamily (20%)" IIGADPTTDIALIK Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.4.21.- (60%) 3.4.21.107 (40%)" "Serine endopeptidases (60%) peptidase Do (40%)" GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001478 (18.4%) IPR001940 (18.4%) IPR009003 (18.4%)" "PDZ domain (18.4%) Peptidase S1C (18.4%) Peptidase S1, PA clan (18.4%)" VEERELPELTAEFIKR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.6%) GO:0051301 (12.4%) GO:0043335 (11.3%)" "GO:0005737 (12.3%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0003755 (12.7%) GO:0043022 (11.3%) GO:0044183 (11.3%)" "protein transport (12.6%) cell division (12.4%) protein unfolding (11.3%)" "cytoplasm (12.3%) cytosol (0.1%) membrane (0.1%)" "peptidyl-prolyl cis-trans isomerase activity (12.7%) ribosome binding (11.3%) protein folding chaperone (11.3%)" "IPR037041 (13%) IPR001179 (12.8%) IPR046357 (12.7%)" "Trigger factor, C-terminal domain superfamily (13%) FKBP-type peptidyl-prolyl cis-trans isomerase domain (12.8%) Peptidyl-prolyl cis-trans isomerase domain superfamily (12.7%)" VSKLEQYFDGIILAEVTLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003489 (50%) IPR036567 (50%)" "Ribosome hibernation promoting factor/RaiA (50%) Ribosome hibernation promotion factor-like (50%)" ISAFDVVLPEGIPYKGQMLNQIAAK Pseudomonadati Bacteria Pseudomonadati 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25.1%) GO:0005737 (24.8%) "GO:0004639 (25.1%) GO:0005524 (25.1%)" 'de novo' IMP biosynthetic process (25.1%) cytoplasm (24.8%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25.1%) ATP binding (25.1%)" "IPR028923 (50.2%) IPR018236 (49.8%)" "SAICAR synthetase/ADE2, N-terminal (50.2%) SAICAR synthetase, conserved site (49.8%)" SVEVILDACCAAMIEGLEER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (33%) "GO:0022627 (32.2%) GO:0005840 (1.7%)" GO:0003735 (33%) translation (33%) "cytosolic small ribosomal subunit (32.2%) ribosome (1.7%)" structural constituent of ribosome (33%) "IPR001865 (25.3%) IPR023591 (25.3%) IPR005706 (24.7%)" "Small ribosomal subunit protein uS2 (25.3%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.3%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (24.7%)" SKDYVFDFVTPYPDFDVK Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.2.1.22 (37.8%) 3.2.1.- (24.4%) 3.2.1.3 (24.4%)" "alpha-galactosidase (37.8%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (24.4%) glucan 1,4-alpha-glucosidase (24.4%)" GO:0005983 (0.2%) "GO:0005886 (0.2%) GO:0042597 (0.2%)" "GO:0030246 (57%) GO:0016787 (33.2%) GO:0004557 (4.5%)" starch catabolic process (0.2%) "plasma membrane (0.2%) periplasmic space (0.2%)" "carbohydrate binding (57%) hydrolase activity (33.2%) alpha-galactosidase activity (4.5%)" "IPR013785 (14.3%) IPR017853 (14.3%) IPR019563 (14.3%)" "Aldolase-type TIM barrel (14.3%) Glycoside hydrolase superfamily (14.3%) Glycosyl-hydrolase 97, catalytic domain (14.3%)" LNYANIPNPAMYER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.3.1.1 (90.9%) 1.3.98.1 (9.1%)" "dihydrouracil dehydrogenase (NAD(+)) (90.9%) dihydroorotate oxidase (fumarate) (9.1%)" "GO:0006210 (12.7%) GO:0006212 (12.7%) GO:0044205 (8.9%)" GO:0005737 (15.2%) "GO:0002058 (12.7%) GO:0004152 (12.7%) GO:0050661 (12.7%)" "thymine catabolic process (12.7%) uracil catabolic process (12.7%) 'de novo' UMP biosynthetic process (8.9%)" cytoplasm (15.2%) "uracil binding (12.7%) dihydroorotate dehydrogenase activity (12.7%) NADP binding (12.7%)" "IPR005720 (31.6%) IPR012135 (31.6%) IPR013785 (31.6%)" "Dihydroorotate dehydrogenase, catalytic (31.6%) Dihydroorotate dehydrogenase, class 1/ 2 (31.6%) Aldolase-type TIM barrel (31.6%)" EVLLSIEEVYNQHPEFEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.4 (100%) glutamate dehydrogenase (NADP(+)) (100%) GO:0006537 (25.5%) "GO:0005829 (24.8%) GO:0009986 (0.7%)" "GO:0004354 (25.5%) GO:0000166 (23.4%)" glutamate biosynthetic process (25.5%) "cytosol (24.8%) cell surface (0.7%)" "glutamate dehydrogenase (NADP+) activity (25.5%) nucleotide binding (23.4%)" "IPR006097 (12.5%) IPR046346 (12.5%) IPR050724 (12.5%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.5%) Aminoacid dehydrogenase-like, N-terminal domain superfamily (12.5%) Glutamate/Leucine/Phenylalanine/Valine dehydrogenases (12.5%)" GKDMAPLYHWLTEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0034599 (50%) GO:0004601 (50%) cellular response to oxidative stress (50%) peroxidase activity (50%) "IPR000889 (25%) IPR013766 (25%) IPR029759 (25%)" "Glutathione peroxidase (25%) Thioredoxin domain (25%) Glutathione peroxidase active site (25%)" ESEMWQTAVTVRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.86 (93.5%) 1.1.1.- (6.5%)" "ketol-acid reductoisomerase (NADP(+)) (93.5%) With NAD(+) or NADP(+) as acceptor (6.5%)" "GO:0009097 (20.9%) GO:0009099 (20.9%)" GO:0070013 (0.3%) "GO:0004455 (20.9%) GO:0046872 (20.3%) GO:0016853 (16.4%)" "isoleucine biosynthetic process (20.9%) L-valine biosynthetic process (20.9%)" intracellular organelle lumen (0.3%) "ketol-acid reductoisomerase activity (20.9%) metal ion binding (20.3%) isomerase activity (16.4%)" "IPR000506 (16.9%) IPR008927 (16.9%) IPR013328 (16.9%)" "Ketol-acid reductoisomerase, C-terminal (16.9%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.9%) 6-phosphogluconate dehydrogenase, domain 2 (16.9%)" AQELNAYKEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0015977 (21.8%) GO:0009317 (21.8%) "GO:0003989 (21.8%) GO:0004658 (21.8%) GO:0016740 (12.8%)" carbon fixation (21.8%) acetyl-CoA carboxylase complex (21.8%) "acetyl-CoA carboxylase activity (21.8%) propionyl-CoA carboxylase activity (21.8%) transferase activity (12.8%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" EFNKEVANVNDAENK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" SRLDVYHTQTAPLADYYVGEGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.4.3 (100%) adenylate kinase (100%) GO:0044209 (25%) GO:0005737 (25%) "GO:0004017 (25%) GO:0005524 (25%)" AMP salvage (25%) cytoplasm (25%) "AMP kinase activity (25%) ATP binding (25%)" "IPR000850 (33.3%) IPR027417 (33.3%) IPR033690 (33.3%)" "Adenylate kinase/UMP-CMP kinase (33.3%) P-loop containing nucleoside triphosphate hydrolase (33.3%) Adenylate kinase, conserved site (33.3%)" IALKYDLVNKVNAIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (16.8%) "GO:0005840 (16.8%) GO:1990904 (16.8%) GO:0005737 (15.9%)" "GO:0003735 (16.8%) GO:0019843 (16.8%)" translation (16.8%) "ribosome (16.8%) ribonucleoprotein complex (16.8%) cytoplasm (15.9%)" "structural constituent of ribosome (16.8%) rRNA binding (16.8%)" "IPR000630 (33.3%) IPR035987 (33.3%) IPR047863 (33.3%)" "Small ribosomal subunit protein uS8 (33.3%) Small ribosomal subunit protein uS8 superfamily (33.3%) Small ribosomal subunit protein uS8, conserved site (33.3%)" TQTGELSIHCTELR root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.4%) GO:0006418 (0.1%) GO:0034605 (0.1%)" "GO:0005829 (14.4%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0000049 (14.4%) GO:0004824 (14.4%) GO:0005524 (14.4%)" "lysyl-tRNA aminoacylation (14.4%) tRNA aminoacylation for protein translation (0.1%) cellular response to heat (0.1%)" "cytosol (14.4%) cytoplasm (0.1%) membrane (0.1%)" "tRNA binding (14.4%) lysine-tRNA ligase activity (14.4%) ATP binding (14.4%)" "IPR012340 (11.5%) IPR044136 (11.5%) IPR004365 (11.4%)" "Nucleic acid-binding, OB-fold (11.5%) Lysine-tRNA ligase, class II, N-terminal (11.5%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.4%)" AGLTAILGCGFDPGVTGVYTAYAAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.5.1.7 (66.7%) 1.5.1.43 (33.3%)" "saccharopine dehydrogenase (NAD(+), L-lysine-forming) (66.7%) carboxynorspermidine synthase (33.3%)" "GO:0004754 (50%) GO:0102143 (50%)" "saccharopine dehydrogenase (NAD+, L-lysine-forming) activity (50%) carboxynorspermidine dehydrogenase activity (50%)" "IPR005097 (33.3%) IPR032095 (33.3%) IPR036291 (33.3%)" "Saccharopine dehydrogenase, NADP binding domain (33.3%) Saccharopine dehydrogenase-like, C-terminal (33.3%) NAD(P)-binding domain superfamily (33.3%)" LFAGQAVNALKTEIATLLTNEVVSESVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0033178 (50%) GO:0046961 (50%) proton-transporting two-sector ATPase complex, catalytic domain (50%) proton-transporting ATPase activity, rotational mechanism (50%) IPR002842 (100%) V-type ATPase subunit E (100%) IVNEPTAAALAYGLDKAHKDMK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0042026 (0.3%) GO:0051085 (0.3%)" GO:0005737 (1.3%) "GO:0005524 (32.5%) GO:0051082 (32.5%) GO:0140662 (32.5%)" "protein refolding (0.3%) obsolete chaperone cofactor-dependent protein refolding (0.3%)" cytoplasm (1.3%) "ATP binding (32.5%) unfolded protein binding (32.5%) ATP-dependent protein folding chaperone (32.5%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" AYGSTNPINVVR root "GO:0006412 (16.9%) GO:0042254 (15.7%) GO:0002181 (0.1%)" "GO:0015935 (16.6%) GO:0005737 (16%) GO:0005840 (0.5%)" "GO:0003735 (16.9%) GO:0019843 (16.7%) GO:0003723 (0.2%)" "translation (16.9%) ribosome biogenesis (15.7%) cytoplasmic translation (0.1%)" "small ribosomal subunit (16.6%) cytoplasm (16%) ribosome (0.5%)" "structural constituent of ribosome (16.9%) rRNA binding (16.7%) RNA binding (0.2%)" "IPR005324 (14.4%) IPR014721 (14.3%) IPR020568 (14.3%)" "Small ribosomal subunit protein uS5, C-terminal (14.4%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (14.3%) Ribosomal protein uS5 domain 2-type superfamily (14.3%)" TILSIAGKPGLYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016301 (100%) kinase activity (100%) "IPR041218 (25.1%) IPR049280 (25.1%) IPR049281 (24.9%)" "Domain of unknown function DUF5606 (25.1%) Domain of unknown function DUF6852 (25.1%) BVU_3817-like, C-terminal domain superfamily (24.9%)" IAHWVGQGATISDR root "GO:0006412 (24.6%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0005737 (24.6%) GO:0015935 (24.6%) GO:0005840 (0.6%)" "GO:0003735 (24.7%) GO:0004519 (0.3%) GO:0000400 (0.1%)" "translation (24.6%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytoplasm (24.6%) small ribosomal subunit (24.6%) ribosome (0.6%)" "structural constituent of ribosome (24.7%) endonuclease activity (0.3%) four-way junction DNA binding (0.1%)" "IPR023803 (33.5%) IPR000307 (33.3%) IPR020592 (33.2%)" "Small ribosomal subunit protein bS16 domain superfamily (33.5%) Small ribosomal subunit protein bS16 (33.3%) Small ribosomal subunit protein bS16, conserved site (33.2%)" GKAEIEVENNHEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006261 (12.5%) GO:0006265 (12.5%)" "GO:0005694 (12.5%) GO:0005737 (12.5%) GO:0009330 (12.5%)" "GO:0003677 (12.5%) GO:0005524 (12.5%) GO:0034335 (12.5%)" "DNA-templated DNA replication (12.5%) DNA topological change (12.5%)" "chromosome (12.5%) cytoplasm (12.5%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.5%)" "DNA binding (12.5%) ATP binding (12.5%) DNA negative supercoiling activity (12.5%)" "IPR002205 (12.5%) IPR005743 (12.5%) IPR006691 (12.5%)" "DNA topoisomerase, type IIA, domain A (12.5%) DNA gyrase, subunit A (12.5%) DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.5%)" ESCNNFYEAVPAIVEEYMNEISK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.1 (60%) 1.2.1.51 (20%) 1.2.7.- (20%)" "pyruvate synthase (60%) pyruvate dehydrogenase (NADP(+)) (20%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (11.3%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (11.3%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" ADAVLHDTPNILYFIK root "GO:0006865 (20.3%) GO:0006868 (0%) GO:1903803 (0%)" "GO:0016020 (26.4%) GO:0030288 (25.9%) GO:0042597 (0.5%)" "GO:0015276 (26.4%) GO:0016597 (0.1%) GO:0016787 (0%)" "amino acid transport (20.3%) glutamine transport (0%) L-glutamine import across plasma membrane (0%)" "membrane (26.4%) outer membrane-bounded periplasmic space (25.9%) periplasmic space (0.5%)" "ligand-gated monoatomic ion channel activity (26.4%) amino acid binding (0.1%) hydrolase activity (0%)" "IPR001638 (25.5%) IPR001320 (25%) IPR044132 (24.8%)" "Solute-binding protein family 3/N-terminal domain of MltF (25.5%) Ionotropic glutamate receptor, C-terminal (25%) Glutamine-binding periplasmic protein GlnH, type 2 periplasmic binding protein fold (24.8%)" SIFNGEKDFTPDFSGKEYLLER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.4.16 (100%) thiamine-phosphate kinase (100%) "GO:0009228 (20%) GO:0009229 (20%)" "GO:0000287 (20%) GO:0005524 (20%) GO:0009030 (20%)" "thiamine biosynthetic process (20%) thiamine diphosphate biosynthetic process (20%)" "magnesium ion binding (20%) ATP binding (20%) thiamine-phosphate kinase activity (20%)" "IPR006283 (25%) IPR016188 (25%) IPR036676 (25%)" "Thiamine-monophosphate kinase-like (25%) PurM-like, N-terminal domain (25%) PurM-like, C-terminal domain superfamily (25%)" VDVAILEACEITPDGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.8.3.- (80%) 3.1.2.1 (20%)" "CoA-transferases (80%) acetyl-CoA hydrolase (20%)" "GO:0006083 (25.3%) GO:0006084 (24.1%)" "GO:0003986 (25.3%) GO:0008775 (25.3%)" "acetate metabolic process (25.3%) acetyl-CoA metabolic process (24.1%)" "acetyl-CoA hydrolase activity (25.3%) acetate CoA-transferase activity (25.3%)" "IPR003702 (17.1%) IPR037171 (17.1%) IPR046433 (17.1%)" "Acetyl-CoA hydrolase/transferase, N-terminal (17.1%) NagB/RpiA transferase-like (17.1%) Acetyl-CoA hydrolase/transferase (17.1%)" INHAIFQNVEMLQDNIAAVTGHIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.7.1.- (33.3%) 2.7.1.162 (33.3%) 3.1.6.- (33.3%)" "Phosphotransferases with an alcohol group as acceptor (33.3%) N-acetylhexosamine 1-kinase (33.3%) Sulfuric ester hydrolases (33.3%)" "GO:0016740 (92.3%) GO:0016301 (7.7%)" "transferase activity (92.3%) kinase activity (7.7%)" "IPR002575 (33.3%) IPR011009 (33.3%) IPR050249 (33.3%)" "Aminoglycoside phosphotransferase (33.3%) Protein kinase-like domain superfamily (33.3%) Pseudomonas-type Homoserine Kinase (33.3%)" DLFVALPGSTLSIDDPVRFEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005980 (33.3%) "GO:0004134 (33.3%) GO:0004135 (33.3%)" glycogen catabolic process (33.3%) "4-alpha-glucanotransferase activity (33.3%) amylo-alpha-1,6-glucosidase activity (33.3%)" "IPR008928 (20%) IPR010401 (20%) IPR012341 (20%)" "Six-hairpin glycosidase superfamily (20%) Glycogen debranching enzyme (20%) Six-hairpin glycosidase-like superfamily (20%)" LLIPDMALTAAEYFAVEHNQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0046034 (31.7%) GO:1902600 (31.7%) GO:0006811 (2.4%)" GO:0005524 (34.1%) "ATP metabolic process (31.7%) proton transmembrane transport (31.7%) monoatomic ion transport (2.4%)" ATP binding (34.1%) "IPR000194 (20.4%) IPR022879 (20.4%) IPR027417 (20.4%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (20.4%) V-type ATP synthase regulatory subunit B/beta (20.4%) P-loop containing nucleoside triphosphate hydrolase (20.4%)" FTPEQCTIDPVTGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.4%) GO:0030388 (24.4%)" GO:0016020 (2.4%) "GO:0004332 (24.4%) GO:0008270 (24.4%)" "glycolytic process (24.4%) fructose 1,6-bisphosphate metabolic process (24.4%)" membrane (2.4%) "fructose-bisphosphate aldolase activity (24.4%) zinc ion binding (24.4%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" TNTHRDAMLSNMACSLIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.3%) IPR036373 (33.3%) IPR047859 (33.3%)" "Large ribosomal subunit protein bL17 (33.3%) Large ribosomal subunit protein bL17 superfamily (33.3%) Large ribosomal subunit protein bL17, conserved site (33.3%)" LNIKEFLDKDEQKDLLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.4 (100%) sulfate adenylyltransferase (100%) "GO:0000103 (16.4%) GO:0070814 (16.4%)" "GO:0003924 (17%) GO:0005525 (17%) GO:0004781 (16.4%)" "sulfate assimilation (16.4%) hydrogen sulfide biosynthetic process (16.4%)" "GTPase activity (17%) GTP binding (17%) sulfate adenylyltransferase (ATP) activity (16.4%)" "IPR000795 (9.4%) IPR027417 (9.4%) IPR009000 (9%)" "Translational (tr)-type GTP-binding domain (9.4%) P-loop containing nucleoside triphosphate hydrolase (9.4%) Translation protein, beta-barrel domain superfamily (9%)" TMDIGGDKELPYMNFPKEENPFLGWR root "2.7.3.9 (99.9%) 2.7.-.- (0.1%)" "phosphoenolpyruvate--protein phosphotransferase (99.9%) Transferring phosphorus-containing groups (0.1%)" "GO:0009401 (19.9%) GO:0015764 (0.1%)" "GO:0005737 (19.9%) GO:0005829 (0%)" "GO:0008965 (20%) GO:0016301 (19.9%) GO:0046872 (19.9%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (19.9%) N-acetylglucosamine transport (0.1%)" "cytoplasm (19.9%) cytosol (0%)" "phosphoenolpyruvate-protein phosphotransferase activity (20%) kinase activity (19.9%) metal ion binding (19.9%)" "IPR000121 (8.5%) IPR015813 (8.5%) IPR040442 (8.5%)" "PEP-utilising enzyme, C-terminal (8.5%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (8.5%) Pyruvate kinase-like domain superfamily (8.5%)" PLLDSFTVDHTR root 4.4.1.21 (100%) S-ribosylhomocysteine lyase (100%) "GO:0009372 (32.9%) GO:0019284 (0.1%) GO:2000145 (0%)" "GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0005506 (32.9%) GO:0043768 (32.9%) GO:0016787 (0.5%)" "quorum sensing (32.9%) L-methionine salvage from S-adenosylmethionine (0.1%) regulation of cell motility (0%)" "cytosol (0.1%) membrane (0.1%)" "iron ion binding (32.9%) S-ribosylhomocysteine lyase activity (32.9%) hydrolase activity (0.5%)" "IPR003815 (33.3%) IPR011249 (33.2%) IPR037005 (33.2%)" "S-ribosylhomocysteinase (LuxS) (33.3%) Metalloenzyme, LuxS/M16 peptidase-like (33.2%) S-ribosylhomocysteinase (LuxS) superfamily (33.2%)" VEGITHDTLGQGNANSIYDFEGAQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.8.2.3 (100%) sulfide-cytochrome-c reductase (flavocytochrome c) (100%) GO:0070221 (29.2%) "GO:0070224 (29.2%) GO:0071949 (29.2%) GO:0070225 (12.5%)" sulfide oxidation, using sulfide:quinone oxidoreductase (29.2%) "sulfide:quinone oxidoreductase activity (29.2%) FAD binding (29.2%) sulfide dehydrogenase activity (12.5%)" "IPR006311 (25%) IPR015904 (25%) IPR023753 (25%)" "Twin-arginine translocation pathway, signal sequence (25%) Sulphide quinone-reductase (25%) FAD/NAD(P)-binding domain (25%)" MITTSGGGALICR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.6.1.- (50%) 2.6.1.87 (50%)" "Transaminases (50%) UDP-4-amino-4-deoxy-L-arabinose aminotransferase (50%)" GO:0000271 (33.2%) "GO:0030170 (33.2%) GO:0008483 (32%) GO:0099620 (1.6%)" polysaccharide biosynthetic process (33.2%) "pyridoxal phosphate binding (33.2%) transaminase activity (32%) UDP-4-amino-4-deoxy-L-arabinose aminotransferase (1.6%)" "IPR000653 (25.1%) IPR015421 (25.1%) IPR015424 (25.1%)" "DegT/DnrJ/EryC1/StrS aminotransferase (25.1%) Pyridoxal phosphate-dependent transferase, major domain (25.1%) Pyridoxal phosphate-dependent transferase (25.1%)" SLEYQYFPFKPEGYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000705 (10%) IPR006203 (10%) IPR006204 (10%)" "Galactokinase (10%) GHMP kinase, ATP-binding, conserved site (10%) GHMP kinase N-terminal domain (10%)" MKHYNFDEVIER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.4.1.13 (100%) cysteine-S-conjugate beta-lyase (100%) "GO:0016829 (40%) GO:0030170 (40%) GO:0008483 (20%)" "lyase activity (40%) pyridoxal phosphate binding (40%) transaminase activity (20%)" "IPR004839 (16.7%) IPR015421 (16.7%) IPR015422 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%) Pyridoxal phosphate-dependent transferase, small domain (16.7%)" GMGESNPVTGNTCDNVK root "GO:0034220 (23.1%) GO:0006811 (1.8%) GO:0006974 (0%)" "GO:0009279 (24.9%) GO:0046930 (24.9%) GO:0019867 (0.1%)" "GO:0015288 (24.9%) GO:0015075 (0%) GO:0016740 (0%)" "monoatomic ion transmembrane transport (23.1%) monoatomic ion transport (1.8%) DNA damage response (0%)" "cell outer membrane (24.9%) pore complex (24.9%) outer membrane (0.1%)" "porin activity (24.9%) monoatomic ion transmembrane transporter activity (0%) transferase activity (0%)" "IPR006665 (12.6%) IPR050330 (12.6%) IPR002368 (12.6%)" "OmpA-like domain (12.6%) Bacterial Outer Membrane Structural/Functional (12.6%) Outer membrane protein, OmpA (12.6%)" NKELQDIISILGMDELSDEDRQTVNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0045259 (23.7%) GO:0005886 (22.4%)" "GO:0005524 (23.7%) GO:0046933 (23.7%) GO:0016787 (5.3%)" "proton-transporting ATP synthase complex (23.7%) plasma membrane (22.4%)" "ATP binding (23.7%) proton-transporting ATP synthase activity, rotational mechanism (23.7%) hydrolase activity (5.3%)" "IPR000194 (10.3%) IPR005722 (10.3%) IPR020003 (10.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.3%) ATP synthase, F1 complex, beta subunit (10.3%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (10.3%)" NFGAVGIGLCR Pseudomonadati Bacteria Pseudomonadati 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0016301 (25.2%) GO:0050242 (25.2%) GO:0005524 (24.7%)" "kinase activity (25.2%) pyruvate, phosphate dikinase activity (25.2%) ATP binding (24.7%)" "IPR000121 (10.1%) IPR010121 (10.1%) IPR023151 (10.1%)" "PEP-utilising enzyme, C-terminal (10.1%) Pyruvate, phosphate dikinase (10.1%) PEP-utilising enzyme, conserved site (10.1%)" EFLVARPEPSLLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (71.4%) GO:0004340 (28.6%)" "kinase activity (71.4%) glucokinase activity (28.6%)" "IPR000600 (33.3%) IPR043129 (33.3%) IPR049874 (33.3%)" "ROK family (33.3%) ATPase, nucleotide binding domain (33.3%) ROK, conserved site (33.3%)" GEIFHFNPGSVSIPK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.1.4.- (100%) Phosphoric diester hydrolases (100%) "GO:0005829 (0.5%) GO:0032991 (0.5%)" "GO:0016787 (49.5%) GO:0046872 (48.2%) GO:0008081 (0.5%)" "cytosol (0.5%) protein-containing complex (0.5%)" "hydrolase activity (49.5%) metal ion binding (48.2%) phosphoric diester hydrolase activity (0.5%)" "IPR000979 (20.3%) IPR024654 (20.3%) IPR029052 (20.3%)" "Phosphodiesterase MJ0936/Vps29 (20.3%) Calcineurin-like phosphoesterase domain, lpxH-type (20.3%) Metallo-dependent phosphatase-like (20.3%)" LVPFLDGQVIKK root "GO:0006364 (20%) GO:0042274 (19.6%) GO:0030490 (0.1%)" "GO:0005840 (20%) GO:0005737 (19.9%) GO:0005829 (0.1%)" "GO:0043022 (20.1%) GO:0003735 (0%) GO:0019843 (0%)" "rRNA processing (20%) ribosomal small subunit biogenesis (19.6%) maturation of SSU-rRNA (0.1%)" "ribosome (20%) cytoplasm (19.9%) cytosol (0.1%)" "ribosome binding (20.1%) structural constituent of ribosome (0%) rRNA binding (0%)" "IPR011033 (16.8%) IPR011961 (16.7%) IPR036976 (16.5%)" "PRC-barrel-like superfamily (16.8%) Ribosome maturation factor RimM (16.7%) RimM, N-terminal domain superfamily (16.5%)" AVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMK root 5.3.1.6 (100%) ribose-5-phosphate isomerase (100%) "GO:0006014 (24.8%) GO:0009052 (24.8%)" GO:0005829 (24.8%) "GO:0004751 (25.1%) GO:0016853 (0.4%) GO:0042802 (0%)" "D-ribose metabolic process (24.8%) pentose-phosphate shunt, non-oxidative branch (24.8%)" cytosol (24.8%) "ribose-5-phosphate isomerase activity (25.1%) isomerase activity (0.4%) identical protein binding (0%)" "IPR037171 (33.8%) IPR004788 (33.4%) IPR020672 (32.4%)" "NagB/RpiA transferase-like (33.8%) Ribose 5-phosphate isomerase, type A (33.4%) Ribose-5-phosphate isomerase, type A, subgroup (32.4%)" LDSHPGELIPEELRQAGEGDAVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" LHVDPENFR root "GO:0042744 (8.6%) GO:0015671 (0.1%) GO:0048821 (0.1%)" "GO:0005833 (9.1%) GO:0031838 (8.7%) GO:0072562 (8.5%)" "GO:0005344 (9.1%) GO:0019825 (9.1%) GO:0020037 (9.1%)" "hydrogen peroxide catabolic process (8.6%) oxygen transport (0.1%) erythrocyte development (0.1%)" "hemoglobin complex (9.1%) haptoglobin-hemoglobin complex (8.7%) blood microparticle (8.5%)" "oxygen carrier activity (9.1%) oxygen binding (9.1%) heme binding (9.1%)" "IPR000971 (20%) IPR009050 (20%) IPR012292 (20%)" "Globin (20%) Globin-like superfamily (20%) Globin/Protoglobin (20%)" VLVLVAAPEGIAALEK root 2.4.2.9 (100%) uracil phosphoribosyltransferase (100%) "GO:0006223 (16.8%) GO:0044206 (16.7%) GO:0006206 (0%)" "GO:0005737 (15.7%) GO:0005829 (0.1%) GO:0016020 (0%)" "GO:0005525 (17%) GO:0004845 (17%) GO:0000287 (16.3%)" "uracil salvage (16.8%) UMP salvage (16.7%) pyrimidine nucleobase metabolic process (0%)" "cytoplasm (15.7%) cytosol (0.1%) membrane (0%)" "GTP binding (17%) uracil phosphoribosyltransferase activity (17%) magnesium ion binding (16.3%)" "IPR000836 (20.3%) IPR029057 (20.2%) IPR050054 (20.2%)" "Phosphoribosyltransferase domain (20.3%) Phosphoribosyltransferase-like (20.2%) Uracil phosphoribosyltransferase/Adenine phosphoribosyltransferase (20.2%)" LSAMIPVVAYIQPTVEVVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" EKADMLYAEIDRNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.9%) GO:0008615 (19.9%)" GO:0005737 (19.9%) "GO:0004648 (19.9%) GO:0030170 (19.9%) GO:0008483 (0.6%)" "L-serine biosynthetic process (19.9%) pyridoxine biosynthetic process (19.9%)" cytoplasm (19.9%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.9%) pyridoxal phosphate binding (19.9%) transaminase activity (0.6%)" "IPR000192 (20.1%) IPR022278 (20.1%) IPR015421 (19.9%)" "Aminotransferase class V domain (20.1%) Phosphoserine aminotransferase (20.1%) Pyridoxal phosphate-dependent transferase, major domain (19.9%)" IKQLKPYQVNK Bacteria Bacteria 2.1.3.3 (100%) ornithine carbamoyltransferase (100%) "GO:0019240 (20%) GO:0042450 (20%)" GO:0005737 (20%) "GO:0004585 (20%) GO:0016597 (20%)" "citrulline biosynthetic process (20%) L-arginine biosynthetic process via ornithine (20%)" cytoplasm (20%) "ornithine carbamoyltransferase activity (20%) amino acid binding (20%)" "IPR002292 (16.7%) IPR006130 (16.7%) IPR006131 (16.7%)" "Ornithine/putrescine carbamoyltransferase (16.7%) Aspartate/ornithine carbamoyltransferase (16.7%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (16.7%)" LEFVEGKVLPAVAMLEER root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.6%) GO:0006094 (16.6%) GO:0008615 (0%)" "GO:0005829 (16.6%) GO:0005737 (0%)" "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "glycolytic process (16.6%) gluconeogenesis (16.6%) pyridoxine biosynthetic process (0%)" "cytosol (16.6%) cytoplasm (0%)" "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (25.1%) IPR015824 (25.1%) IPR036043 (25.1%)" "Phosphoglycerate kinase (25.1%) Phosphoglycerate kinase, N-terminal (25.1%) Phosphoglycerate kinase superfamily (25.1%)" GGDYRESFQPAHIDPAHLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "6.3.1.21 (91.3%) 2.1.2.- (8.7%)" "phosphoribosylglycinamide formyltransferase 2 (91.3%) Hydroxymethyl-, formyl- and related transferases (8.7%)" "GO:0006189 (16.2%) GO:0009152 (0.3%)" GO:0005829 (16.7%) "GO:0005524 (16.7%) GO:0000287 (16.5%) GO:0004644 (16.5%)" "'de novo' IMP biosynthetic process (16.2%) purine ribonucleotide biosynthetic process (0.3%)" cytosol (16.7%) "ATP binding (16.7%) magnesium ion binding (16.5%) phosphoribosylglycinamide formyltransferase activity (16.5%)" "IPR003135 (12.6%) IPR011054 (12.6%) IPR011761 (12.6%)" "ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (12.6%) Rudiment single hybrid motif (12.6%) ATP-grasp fold (12.6%)" AGIPVMAAGHDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (16.7%) IPR014729 (16.7%) IPR017926 (16.7%)" "GMP synthase, C-terminal (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Glutamine amidotransferase (16.7%)" IVYDEFIKEGVPIPPPEDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GKPFTVGGWIGER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (44.4%) IPR019734 (44.4%) IPR013105 (11.1%)" "Tetratricopeptide-like helical domain superfamily (44.4%) Tetratricopeptide repeat (44.4%) Tetratricopeptide repeat 2 (11.1%)" GVNFVYMGDAR Clostridia Bacteria Bacillati Bacillota Clostridia 2.1.3.3 (100%) ornithine carbamoyltransferase (100%) "GO:0019240 (20.1%) GO:0042450 (20.1%)" GO:0005737 (19.4%) "GO:0004585 (20.1%) GO:0016597 (20.1%)" "citrulline biosynthetic process (20.1%) L-arginine biosynthetic process via ornithine (20.1%)" cytoplasm (19.4%) "ornithine carbamoyltransferase activity (20.1%) amino acid binding (20.1%)" "IPR002292 (16.7%) IPR006130 (16.7%) IPR006131 (16.7%)" "Ornithine/putrescine carbamoyltransferase (16.7%) Aspartate/ornithine carbamoyltransferase (16.7%) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (16.7%)" MNIGDKAPEILGINEKGEEIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) "GO:0034599 (25%) GO:0045454 (25%)" GO:0005737 (25%) GO:0008379 (25%) "cellular response to oxidative stress (25%) cell redox homeostasis (25%)" cytoplasm (25%) thioredoxin peroxidase activity (25%) "IPR000866 (20.3%) IPR013766 (20.3%) IPR036249 (20.3%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (20.3%) Thioredoxin domain (20.3%) Thioredoxin-like superfamily (20.3%)" AAVAGIAMGLVK root 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006402 (14.3%) GO:0006396 (14%) GO:0006401 (0%)" "GO:0005829 (14.3%) GO:0016020 (0%) GO:1990061 (0%)" "GO:0003723 (14.3%) GO:0004654 (14.3%) GO:0000175 (14.3%)" "mRNA catabolic process (14.3%) RNA processing (14%) RNA catabolic process (0%)" "cytosol (14.3%) membrane (0%) bacterial degradosome (0%)" "RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%) 3'-5'-RNA exonuclease activity (14.3%)" "IPR012162 (7.9%) IPR027408 (7.9%) IPR015847 (7.9%)" "Polyribonucleotide nucleotidyltransferase (7.9%) PNPase/RNase PH domain superfamily (7.9%) Exoribonuclease, phosphorolytic domain 2 (7.9%)" VNPNDTNVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (23%) GO:0009263 (7.2%)" "GO:0004748 (23%) GO:0031419 (23%) GO:0000166 (15.8%)" "DNA biosynthetic process (23%) deoxyribonucleotide biosynthetic process (7.2%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (23%) cobalamin binding (23%) nucleotide binding (15.8%)" "IPR000788 (30.3%) IPR013344 (30.3%) IPR050862 (30.3%)" "Ribonucleotide reductase large subunit, C-terminal (30.3%) Ribonucleotide reductase, adenosylcobalamin-dependent (30.3%) Ribonucleoside diphosphate reductase class-2 (30.3%)" FAGALDTYTIEGLMQDGK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR002314 (11.1%) IPR004154 (11.1%) IPR004499 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Anticodon-binding (11.1%) Proline-tRNA ligase, class IIa, archaeal-type (11.1%)" VSFTPEQIR root 2.7.1.176 (100%) UDP-N-acetylglucosamine kinase (100%) "GO:0006412 (16.1%) GO:0006417 (16.1%)" GO:0015934 (16.1%) "GO:0000049 (16.1%) GO:0003735 (16.1%) GO:0019843 (16.1%)" "translation (16.1%) regulation of translation (16.1%)" large ribosomal subunit (16.1%) "tRNA binding (16.1%) structural constituent of ribosome (16.1%) rRNA binding (16.1%)" "IPR002143 (16.1%) IPR005878 (16.1%) IPR016095 (16.1%)" "Large ribosomal subunit protein uL1 (16.1%) Large ribosomal subunit protein uL1, bacteria (16.1%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.1%)" LNEVIELLQPAWQKEPDLNLLQFLQK root "GO:0005737 (25%) GO:0005829 (25%)" "GO:0004674 (25%) GO:0016491 (25%)" "cytoplasm (25%) cytosol (25%)" "protein serine/threonine kinase activity (25%) oxidoreductase activity (25%)" "IPR009383 (47.6%) IPR038134 (47.6%) IPR001853 (0.6%)" "Protein of unknown function DUF1040 (47.6%) YihD-like superfamily (47.6%) DSBA-like thioredoxin domain (0.6%)" VEAMNADVER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006412 (12.5%) GO:0006417 (12.5%)" GO:0005737 (12.5%) "GO:0000049 (12.5%) GO:0003677 (12.5%) GO:0005524 (12.5%)" "translation (12.5%) regulation of translation (12.5%)" cytoplasm (12.5%) "tRNA binding (12.5%) DNA binding (12.5%) ATP binding (12.5%)" "IPR003439 (12.5%) IPR003593 (12.5%) IPR017871 (12.5%)" "ABC transporter-like, ATP-binding domain (12.5%) AAA+ ATPase domain (12.5%) ABC transporter-like, conserved site (12.5%)" MNAEAGACEDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.11.1.1 (100%) NADH peroxidase (100%) "GO:0005506 (50%) GO:0016491 (20.5%) GO:0016692 (15.9%)" "iron ion binding (50%) oxidoreductase activity (20.5%) NADH peroxidase activity (15.9%)" "IPR003251 (12.5%) IPR009040 (12.5%) IPR009078 (12.5%)" "Rubrerythrin, diiron-binding domain (12.5%) Ferritin-like diiron domain (12.5%) Ferritin-like superfamily (12.5%)" MSVTVINAGTQHNVIPDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.5.1.16 (100%) acetylornithine deacetylase (100%) GO:0006526 (33.3%) "GO:0008777 (33.3%) GO:0046872 (33.3%)" L-arginine biosynthetic process (33.3%) "acetylornithine deacetylase activity (33.3%) metal ion binding (33.3%)" "IPR001261 (20%) IPR002933 (20%) IPR011650 (20%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%) Peptidase M20 (20%) Peptidase M20, dimerisation domain (20%)" TKVELALANGLTPIFCIGEVLEER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" AFQPLTTVLEAGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50%) GO:0046872 (50%)" "alkaline phosphatase activity (50%) metal ion binding (50%)" "IPR001952 (50%) IPR017850 (50%)" "Alkaline phosphatase (50%) Alkaline-phosphatase-like, core domain superfamily (50%)" SSGDPADQKYVELK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006974 (0.5%) GO:0033554 (0.5%)" "GO:0005886 (48.5%) GO:0005829 (0.5%) GO:0016020 (0.5%)" GO:0043022 (49.5%) "DNA damage response (0.5%) cellular response to stress (0.5%)" "plasma membrane (48.5%) cytosol (0.5%) membrane (0.5%)" ribosome binding (49.5%) "IPR043604 (33.6%) IPR010279 (33.3%) IPR043605 (33%)" "DUF883, N-terminal domain (33.6%) Inner membrane protein YqjD/ElaB (33.3%) DUF883, C-terminal domain (33%)" TSTSDENLCGLKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (20%) IPR011013 (20%) IPR014718 (20%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (20%) Galactose mutarotase-like domain superfamily (20%) Glycoside hydrolase-type carbohydrate-binding (20%)" FGIATASDLGQAPYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.8.1.9 (100%) thioredoxin-disulfide reductase (NADPH) (100%) GO:0019430 (33.3%) GO:0005737 (33.3%) GO:0004791 (33.3%) removal of superoxide radicals (33.3%) cytoplasm (33.3%) thioredoxin-disulfide reductase (NADPH) activity (33.3%) "IPR005982 (20%) IPR008255 (20%) IPR023753 (20%)" "Thioredoxin reductase (20%) Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (20%) FAD/NAD(P)-binding domain (20%)" SRYWGTPLPIWR root 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.3%) GO:0005737 (14.2%) "GO:0004822 (14.4%) GO:0005524 (14.4%) GO:0002161 (14.3%)" isoleucyl-tRNA aminoacylation (14.3%) cytoplasm (14.2%) "isoleucine-tRNA ligase activity (14.4%) ATP binding (14.4%) aminoacyl-tRNA deacylase activity (14.3%)" "IPR002300 (12.6%) IPR023586 (12.6%) IPR014729 (12.5%)" "Aminoacyl-tRNA synthetase, class Ia (12.6%) Isoleucine-tRNA ligase, type 2 (12.6%) Rossmann-like alpha/beta/alpha sandwich fold (12.5%)" LMNNVSYFR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.29 (95.2%) 2.3.1.50 (4.8%)" "glycine C-acetyltransferase (95.2%) serine C-palmitoyltransferase (4.8%)" "GO:0030148 (13.9%) GO:0019518 (13.1%) GO:0006567 (0.7%)" "GO:0005829 (13.9%) GO:0016020 (13.9%)" "GO:0008890 (13.9%) GO:0030170 (13.9%) GO:0016874 (8.8%)" "sphingolipid biosynthetic process (13.9%) L-threonine catabolic process to glycine (13.1%) L-threonine catabolic process (0.7%)" "cytosol (13.9%) membrane (13.9%)" "glycine C-acetyltransferase activity (13.9%) pyridoxal phosphate binding (13.9%) ligase activity (8.8%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" FLVWDNDSRQPLYWESDENR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.1.25 (100%) 4-alpha-glucanotransferase (100%) GO:0005975 (24.5%) GO:0005737 (24.5%) "GO:0004134 (24.5%) GO:2001070 (24.5%) GO:0016787 (1.9%)" carbohydrate metabolic process (24.5%) cytoplasm (24.5%) "4-alpha-glucanotransferase activity (24.5%) starch binding (24.5%) hydrolase activity (1.9%)" "IPR002044 (16.7%) IPR003385 (16.7%) IPR013783 (16.7%)" "Carbohydrate binding module family 20 (16.7%) Glycoside hydrolase, family 77 (16.7%) Immunoglobulin-like fold (16.7%)" SIVVLGSGAYR Pseudomonadati Bacteria Pseudomonadati "6.3.5.5 (92.7%) 6.3.4.16 (7.3%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (92.7%) carbamoyl-phosphate synthase (ammonia) (7.3%)" "GO:0006541 (14.3%) GO:0006221 (10.3%) GO:0006526 (10.2%)" GO:0005737 (14.3%) "GO:0004088 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "glutamine metabolic process (14.3%) pyrimidine nucleotide biosynthetic process (10.3%) L-arginine biosynthetic process (10.2%)" cytoplasm (14.3%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR005479 (10.1%) IPR005483 (10.1%) IPR011761 (10.1%)" "Carbamoyl phosphate synthase, ATP-binding domain (10.1%) Carbamoyl phosphate synthase, CPSase domain (10.1%) ATP-grasp fold (10.1%)" RGHTVYVQHTAGINSGFADDAYVAAGAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.1.1 (100%) alanine dehydrogenase (100%) GO:0042853 (25%) GO:0005886 (25%) "GO:0000166 (25%) GO:0000286 (25%)" L-alanine catabolic process (25%) plasma membrane (25%) "nucleotide binding (25%) alanine dehydrogenase activity (25%)" "IPR007698 (16.7%) IPR007886 (16.7%) IPR008141 (16.7%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (16.7%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (16.7%) Alanine dehydrogenase (16.7%)" FEDLYNGAAEKVDEIAER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.16.-.- (100%) Oxidizing metal ions (100%) "GO:0008199 (44.4%) GO:0016722 (44.4%) GO:0003677 (11.1%)" "ferric iron binding (44.4%) oxidoreductase activity, acting on metal ions (44.4%) DNA binding (11.1%)" "IPR002177 (20%) IPR008331 (20%) IPR009078 (20%)" "DNA-binding protein Dps (20%) Ferritin/DPS domain (20%) Ferritin-like superfamily (20%)" AIKPVNEADVEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0032790 (25.5%) "GO:0003746 (25.5%) GO:0005525 (25.5%) GO:0003924 (23.4%)" ribosome disassembly (25.5%) "translation elongation factor activity (25.5%) GTP binding (25.5%) GTPase activity (23.4%)" "IPR009000 (7.8%) IPR027417 (7.8%) IPR035647 (7.8%)" "Translation protein, beta-barrel domain superfamily (7.8%) P-loop containing nucleoside triphosphate hydrolase (7.8%) EF-G domain III/V-like (7.8%)" LFWQLPGVYSTAAGYTGGYTPNPTYR root 1.8.4.11 (100%) peptide-methionine (S)-S-oxide reductase (100%) "GO:0034599 (24.2%) GO:0036211 (2.4%) GO:0006979 (0.1%)" "GO:0005737 (24.2%) GO:0005829 (0.1%)" "GO:0008113 (24.2%) GO:0036456 (24.2%) GO:0016491 (0.3%)" "cellular response to oxidative stress (24.2%) protein modification process (2.4%) response to oxidative stress (0.1%)" "cytoplasm (24.2%) cytosol (0.1%)" "peptide-methionine (S)-S-oxide reductase activity (24.2%) obsolete L-methionine-(S)-S-oxide reductase activity (24.2%) oxidoreductase activity (0.3%)" "IPR002569 (33.4%) IPR050162 (33.4%) IPR036509 (33.2%)" "Peptide methionine sulphoxide reductase MsrA domain (33.4%) Methionine Sulfoxide Reductase A (33.4%) Peptide methionine sulphoxide reductase MsrA superfamily (33.2%)" SEAPIVGTGIER Bacteria Bacteria 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (19.9%) GO:0000428 (20.1%) "GO:0003677 (19.9%) GO:0003899 (19.9%) GO:0032549 (19.9%)" DNA-templated transcription (19.9%) DNA-directed RNA polymerase complex (20.1%) "DNA binding (19.9%) DNA-directed RNA polymerase activity (19.9%) ribonucleoside binding (19.9%)" "IPR007120 (7.9%) IPR007121 (7.9%) IPR007645 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) RNA polymerase, beta subunit, conserved site (7.9%) RNA polymerase Rpb2, domain 3 (7.9%)" YDTMHGQFDGTIEADVENSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0006006 (24.6%) "GO:0051287 (25.3%) GO:0050661 (24.6%) GO:0004365 (13.8%)" glucose metabolic process (24.6%) "NAD binding (25.3%) NADP binding (24.6%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (13.8%)" "IPR020828 (16.9%) IPR020831 (16.9%) IPR020830 (16.7%)" "Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.9%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (16.9%) Glyceraldehyde 3-phosphate dehydrogenase, active site (16.7%)" VGAELAITNYGAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (16.7%) IPR011013 (16.7%) IPR014718 (16.7%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (16.7%) Galactose mutarotase-like domain superfamily (16.7%) Glycoside hydrolase-type carbohydrate-binding (16.7%)" NIQTLNSLQTLLGHGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) GO:0006096 (50%) GO:0004332 (50%) glycolytic process (50%) fructose-bisphosphate aldolase activity (50%) "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" RNPADFALWK root "6.1.1.16 (99.6%) 3.2.1.22 (0.2%) 3.1.4.46 (0.1%)" "cysteine--tRNA ligase (99.6%) alpha-galactosidase (0.2%) glycerophosphodiester phosphodiesterase (0.1%)" "GO:0006423 (18.8%) GO:0006418 (0.1%) GO:0010197 (0.1%)" "GO:0005737 (11%) GO:0005739 (4.8%) GO:0009507 (4.8%)" "GO:0005524 (19%) GO:0004817 (18.8%) GO:0046872 (12.8%)" "cysteinyl-tRNA aminoacylation (18.8%) tRNA aminoacylation for protein translation (0.1%) polar nucleus fusion (0.1%)" "cytoplasm (11%) mitochondrion (4.8%) chloroplast (4.8%)" "ATP binding (19%) cysteine-tRNA ligase activity (18.8%) metal ion binding (12.8%)" "IPR024909 (17.2%) IPR032678 (17.2%) IPR014729 (16.8%)" "Cysteinyl-tRNA synthetase/mycothiol ligase (17.2%) tRNA synthetases class I, catalytic domain (17.2%) Rossmann-like alpha/beta/alpha sandwich fold (16.8%)" ELMNIHAMFDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" MILPIYVYGQPVLRK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.5.1.88 (100%) peptide deformylase (100%) "GO:0043686 (25.2%) GO:0006412 (24.6%)" "GO:0042586 (25.2%) GO:0046872 (24.6%) GO:0016787 (0.3%)" "obsolete co-translational protein modification (25.2%) translation (24.6%)" "peptide deformylase activity (25.2%) metal ion binding (24.6%) hydrolase activity (0.3%)" "IPR023635 (50%) IPR036821 (50%)" "Peptide deformylase (50%) Peptide deformylase superfamily (50%)" KAVEAFVSTVTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0030261 (11.8%) GO:0006270 (10.6%) GO:0006351 (10.6%)" "GO:0005829 (11.8%) GO:1990103 (10.6%) GO:1990178 (10.6%)" "GO:0003677 (11.8%) GO:0030527 (11.8%) GO:0042802 (10.6%)" "chromosome condensation (11.8%) DNA replication initiation (10.6%) DNA-templated transcription (10.6%)" "cytosol (11.8%) DnaA-HU complex (10.6%) HU-DNA complex (10.6%)" "DNA binding (11.8%) structural constituent of chromatin (11.8%) identical protein binding (10.6%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" ENYPDQFIIADAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.23 (100%) orotidine-5'-phosphate decarboxylase (100%) "GO:0006207 (33.2%) GO:0044205 (33.2%)" "GO:0004590 (33.2%) GO:0016829 (0.5%)" "'de novo' pyrimidine nucleobase biosynthetic process (33.2%) 'de novo' UMP biosynthetic process (33.2%)" "orotidine-5'-phosphate decarboxylase activity (33.2%) lyase activity (0.5%)" "IPR001754 (25%) IPR011060 (25%) IPR011995 (25%)" "Orotidine 5'-phosphate decarboxylase domain (25%) Ribulose-phosphate binding barrel (25%) Orotidine 5'-phosphate decarboxylase, type 2 (25%)" TAPGANDTLTDADALK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0016884 (90%) GO:0016740 (10%)" "carbon-nitrogen ligase activity, with glutamine as amido-N-donor (90%) transferase activity (10%)" "IPR003789 (25.3%) IPR019004 (25.3%) IPR042184 (25.3%)" "Aspartyl/glutamyl-tRNA amidotransferase subunit B-like (25.3%) Uncharacterised protein YqeY/Aim41 (25.3%) YqeY/Aim41, N-terminal domain (25.3%)" SSPYGTVEDPFHPAELCFGAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.-.- (50%) 1.2.7.3 (50%)" "Acting on the aldehyde or oxo group of donors (50%) 2-oxoglutarate synthase (50%)" GO:0044281 (32.8%) "GO:0030976 (33.6%) GO:0016625 (32.4%) GO:0047553 (1.2%)" small molecule metabolic process (32.8%) "thiamine pyrophosphate binding (33.6%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (32.4%) 2-oxoglutarate synthase activity (1.2%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" SQNLDATAINQIHALISAQGVNEIISK root GO:0016032 (50%) GO:0016020 (50%) viral process (50%) membrane (50%) IPR019276 (100%) Protein of unkown function DUF2303 (100%) GAALNAVQIAEYLLK Bacteria Bacteria 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0019877 (11.1%) GO:0009088 (11%) GO:0009089 (11%)" "GO:0046983 (11.2%) GO:0004073 (11.1%) GO:0050661 (11.1%)" "diaminopimelate biosynthetic process (11.1%) threonine biosynthetic process (11%) lysine biosynthetic process via diaminopimelate (11%)" "protein dimerization activity (11.2%) aspartate-semialdehyde dehydrogenase activity (11.1%) NADP binding (11.1%)" "IPR012280 (19.1%) IPR000534 (18.8%) IPR005986 (18.8%)" "Semialdehyde dehydrogenase, dimerisation domain (19.1%) Semialdehyde dehydrogenase, NAD-binding (18.8%) Aspartate-semialdehyde dehydrogenase, beta-type (18.8%)" FVKEDTSNIAER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (24.5%) "GO:0004639 (25%) GO:0005524 (25%) GO:0016874 (0.5%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (24.5%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%) ligase activity (0.5%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" TSAFAVAMDDSPLYRR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) AAQAANNQKEVNALTAYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (44%) IPR019734 (44%) IPR013105 (12%)" "Tetratricopeptide-like helical domain superfamily (44%) Tetratricopeptide repeat (44%) Tetratricopeptide repeat 2 (12%)" MYCDYFNTVGYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016853 (100%) isomerase activity (100%) "IPR013022 (24.7%) IPR036237 (24.7%) IPR050312 (24.7%)" "Xylose isomerase-like, TIM barrel domain (24.7%) Xylose isomerase-like superfamily (24.7%) IolE/XylA/MocC-like (24.7%)" HVAENNTPDVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (25%) GO:0016052 (25%)" GO:0005737 (25%) GO:0004139 (25%) "deoxyribonucleotide catabolic process (25%) carbohydrate catabolic process (25%)" cytoplasm (25%) deoxyribose-phosphate aldolase activity (25%) "IPR013785 (34.5%) IPR002915 (32.8%) IPR011343 (32.8%)" "Aldolase-type TIM barrel (34.5%) DeoC/FbaB/LacD aldolase (32.8%) Deoxyribose-phosphate aldolase (32.8%)" ANVSQVMHIIGDVAGRDCVLVDDMIDTGGTLCK root 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11%)" "GO:0005737 (11.1%) GO:0002189 (11.1%) GO:0005829 (0%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0016301 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11%)" "cytoplasm (11.1%) ribose phosphate diphosphokinase complex (11.1%) cytosol (0%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) kinase activity (11.1%)" "IPR000836 (16.9%) IPR005946 (16.9%) IPR029057 (16.9%)" "Phosphoribosyltransferase domain (16.9%) Ribose-phosphate pyrophosphokinase (16.9%) Phosphoribosyltransferase-like (16.9%)" KLIGDDEHGWDNEGVFNYEGGCYAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.1%) GO:0005829 (17.1%) "GO:0004612 (17.1%) GO:0005524 (17.1%) GO:0046872 (17.1%)" gluconeogenesis (17.1%) cytosol (17.1%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.1%) ATP binding (17.1%) metal ion binding (17.1%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" EHQIVPSAPMVVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR002318 (9.1%) IPR003156 (9.1%) IPR009000 (9.1%)" "Alanine-tRNA ligase, class IIc (9.1%) DHHA1 domain (9.1%) Translation protein, beta-barrel domain superfamily (9.1%)" INDKFQQLIYGAGYDHCYVLNK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (20%) IPR011013 (20%) IPR014718 (20%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (20%) Galactose mutarotase-like domain superfamily (20%) Glycoside hydrolase-type carbohydrate-binding (20%)" VFAEKPAEFDPRK Bacteria Bacteria "4.1.2.13 (98.6%) 4.1.2.- (1.4%)" "fructose-bisphosphate aldolase (98.6%) Aldehyde-lyases (1.4%)" "GO:0006096 (24.5%) GO:0030388 (24.5%) GO:0005975 (0.7%)" "GO:0008270 (25.2%) GO:0004332 (24.5%) GO:0016832 (0.7%)" "glycolytic process (24.5%) fructose 1,6-bisphosphate metabolic process (24.5%) carbohydrate metabolic process (0.7%)" "zinc ion binding (25.2%) fructose-bisphosphate aldolase activity (24.5%) aldehyde-lyase activity (0.7%)" "IPR000771 (25.2%) IPR013785 (25.2%) IPR050246 (25.2%)" "Fructose-bisphosphate aldolase, class-II (25.2%) Aldolase-type TIM barrel (25.2%) Class II Fructose-bisphosphate Aldolase (25.2%)" ATAERDGMMDVFEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" QMQVGGKDPLVPEENDKTTVIALR root "2.7.7.6 (99.6%) 2.7.6.5 (0.2%) 5.6.2.4 (0.2%)" "DNA-directed RNA polymerase (99.6%) GTP diphosphokinase (0.2%) DNA 3'-5' helicase (0.2%)" "GO:0006351 (24.4%) GO:0006352 (0.1%) GO:0006281 (0.1%)" "GO:0000428 (24.8%) GO:0000345 (0.1%) GO:0005829 (0.1%)" "GO:0003677 (24.5%) GO:0003899 (24.5%) GO:0016779 (0.3%)" "DNA-templated transcription (24.4%) DNA-templated transcription initiation (0.1%) DNA repair (0.1%)" "DNA-directed RNA polymerase complex (24.8%) cytosolic DNA-directed RNA polymerase complex (0.1%) cytosol (0.1%)" "DNA binding (24.5%) DNA-directed RNA polymerase activity (24.5%) nucleotidyltransferase activity (0.3%)" "IPR003716 (32.8%) IPR006110 (32.8%) IPR036161 (32.8%)" "DNA-directed RNA polymerase, omega subunit (32.8%) RNA polymerase, subunit omega/Rpo6/RPB6 (32.8%) RPB6/omega subunit-like superfamily (32.8%)" LLPVLIENMGEAYPELNAQK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR002318 (9.3%) IPR018164 (9.3%) IPR018165 (9.3%)" "Alanine-tRNA ligase, class IIc (9.3%) Alanyl-tRNA synthetase, class IIc, N-terminal (9.3%) Alanyl-tRNA synthetase, class IIc, core domain (9.3%)" MQIDSKPEELDR root 3.6.1.15 (100%) nucleoside-triphosphate phosphatase (100%) "GO:0034605 (17%) GO:0042026 (15.7%) GO:0006508 (0.4%)" "GO:0005829 (15.1%) GO:0005737 (2%) GO:0005759 (0%)" "GO:0005524 (17%) GO:0016887 (17%) GO:0042802 (15.1%)" "cellular response to heat (17%) protein refolding (15.7%) proteolysis (0.4%)" "cytosol (15.1%) cytoplasm (2%) mitochondrial matrix (0%)" "ATP binding (17%) ATP hydrolysis activity (17%) identical protein binding (15.1%)" "IPR027417 (8.6%) IPR041546 (8.6%) IPR050130 (8.6%)" "P-loop containing nucleoside triphosphate hydrolase (8.6%) ClpA/ClpB, AAA lid domain (8.6%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.6%)" TLFSSSHNIEKELPTTDLIIGAVLIPGAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.1.1 (100%) alanine dehydrogenase (100%) GO:0042853 (25.6%) GO:0005886 (25.6%) "GO:0000286 (25.6%) GO:0000166 (23.2%)" L-alanine catabolic process (25.6%) plasma membrane (25.6%) "alanine dehydrogenase activity (25.6%) nucleotide binding (23.2%)" "IPR007698 (20%) IPR007886 (20%) IPR008141 (20%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (20%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (20%) Alanine dehydrogenase (20%)" ENDIKVEQDDVINMAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.3%) GO:0043335 (16.3%) GO:0051083 (16.3%)" "GO:0003755 (16.3%) GO:0043022 (16.3%) GO:0044183 (16.3%)" "protein transport (16.3%) protein unfolding (16.3%) 'de novo' cotranslational protein folding (16.3%)" "peptidyl-prolyl cis-trans isomerase activity (16.3%) ribosome binding (16.3%) protein folding chaperone (16.3%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" LYGEHHAVLMDHR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.3%) GO:0006879 (14.3%)" GO:0005829 (14.3%) "GO:0004322 (14.3%) GO:0008198 (14.3%) GO:0008199 (14.3%)" "iron ion transport (14.3%) intracellular iron ion homeostasis (14.3%)" cytosol (14.3%) "ferroxidase activity (14.3%) ferrous iron binding (14.3%) ferric iron binding (14.3%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" EAQNQELLDFVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.8.1 (50%) 1.3.8.- (16.7%) 1.3.8.7 (16.7%)" "short-chain acyl-CoA dehydrogenase (50%) With a flavin as acceptor (16.7%) medium-chain acyl-CoA dehydrogenase (16.7%)" "GO:0050660 (49.5%) GO:0003995 (46.6%) GO:0016937 (2.9%)" "flavin adenine dinucleotide binding (49.5%) acyl-CoA dehydrogenase activity (46.6%) short-chain fatty acyl-CoA dehydrogenase activity (2.9%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009075 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.1%)" SVGIPDSEHTYFVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR032265 (100%) Protein of unknown function DUF4831 (100%) DVEAPTYNDAVAEQIDEVKAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "1.2.-.- (50%) 1.2.7.3 (50%)" "Acting on the aldehyde or oxo group of donors (50%) 2-oxoglutarate synthase (50%)" GO:0044281 (33.3%) "GO:0016625 (33.3%) GO:0030976 (33.3%)" small molecule metabolic process (33.3%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (33.3%) thiamine pyrophosphate binding (33.3%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" EANKQNEVVAAQLASVFDLSAEDFSK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" QNITDLPAKENR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" VQIIGFGNFEVR root "GO:0030261 (11.2%) GO:0010467 (11%) GO:0006270 (11%)" "GO:0005829 (11.2%) GO:1990103 (11%) GO:1990178 (11%)" "GO:0003677 (11.3%) GO:0030527 (11.2%) GO:0042802 (11%)" "chromosome condensation (11.2%) gene expression (11%) DNA replication initiation (11%)" "cytosol (11.2%) DnaA-HU complex (11%) HU-DNA complex (11%)" "DNA binding (11.3%) structural constituent of chromatin (11.2%) identical protein binding (11%)" "IPR000119 (33.6%) IPR010992 (33.6%) IPR020816 (32.5%)" "Histone-like DNA-binding protein (33.6%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.6%) Histone-like DNA-binding protein, conserved site (32.5%)" NALPHWELAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.11 (100%) serine--tRNA ligase (100%) GO:0006434 (25%) GO:0005737 (25%) "GO:0004828 (25%) GO:0005524 (25%)" seryl-tRNA aminoacylation (25%) cytoplasm (25%) "serine-tRNA ligase activity (25%) ATP binding (25%)" "IPR002314 (13.5%) IPR002317 (13.5%) IPR006195 (13.5%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (13.5%) Serine-tRNA ligase, type1 (13.5%) Aminoacyl-tRNA synthetase, class II (13.5%)" EVLLGTNQFPNFNEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (24.9%) "GO:0004494 (24.9%) GO:0031419 (24.9%) GO:0046872 (24.9%)" lactate fermentation to propionate and acetate (24.9%) "methylmalonyl-CoA mutase activity (24.9%) cobalamin binding (24.9%) metal ion binding (24.9%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" VVVPAGVDVK root "GO:0002181 (24.5%) GO:0006412 (0.3%) GO:0000027 (0.1%)" "GO:0022625 (24.5%) GO:0005840 (0.9%) GO:1990904 (0.1%)" "GO:0003735 (24.7%) GO:0019843 (24.7%) GO:0070180 (0.1%)" "cytoplasmic translation (24.5%) translation (0.3%) ribosomal large subunit assembly (0.1%)" "cytosolic large ribosomal subunit (24.5%) ribosome (0.9%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.7%) rRNA binding (24.7%) large ribosomal subunit rRNA binding (0.1%)" "IPR036789 (20.1%) IPR020040 (20.1%) IPR000702 (19.9%)" "Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily (20.1%) Large ribosomal subunit protein uL6, alpha-beta domain (20.1%) Large ribosomal subunit protein uL6-like (19.9%)" FLANAGVCSR Bacteroidota Bacteria Pseudomonadati Bacteroidota "5.4.99.- (99.6%) 5.4.99.22 (0.4%)" "Transferring other groups (99.6%) 23S rRNA pseudouridine(2605) synthase (0.4%)" "GO:0000455 (32.1%) GO:0001522 (0.9%) GO:0006364 (0.9%)" GO:0005829 (0.1%) "GO:0003723 (33%) GO:0120159 (32.1%) GO:0009982 (0.7%)" "enzyme-directed rRNA pseudouridine synthesis (32.1%) pseudouridine synthesis (0.9%) rRNA processing (0.9%)" cytosol (0.1%) "RNA binding (33%) rRNA pseudouridine synthase activity (32.1%) pseudouridine synthase activity (0.7%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" EVINEDELIQLMEERPDFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.95 (100%) phosphoglycerate dehydrogenase (100%) "GO:0051287 (43.4%) GO:0016616 (39.6%) GO:0016787 (13.2%)" "NAD binding (43.4%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (39.6%) hydrolase activity (13.2%)" "IPR006139 (33.3%) IPR006140 (33.3%) IPR036291 (33.3%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (33.3%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (33.3%) NAD(P)-binding domain superfamily (33.3%)" VCTDAVFAAVDLEKEEGAEWLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (30.2%) GO:0006044 (30.2%)" "GO:0004342 (30.2%) GO:0016853 (9.4%)" "carbohydrate metabolic process (30.2%) N-acetylglucosamine metabolic process (30.2%)" "glucosamine-6-phosphate deaminase activity (30.2%) isomerase activity (9.4%)" "IPR003737 (14.3%) IPR004547 (14.3%) IPR006148 (14.3%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.3%) Glucosamine-6-phosphate isomerase (14.3%) Glucosamine/galactosamine-6-phosphate isomerase (14.3%)" NITDVGHLEHDADEGEDKIAK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.16 (100%) cysteine--tRNA ligase (100%) GO:0006423 (20%) "GO:0005829 (20%) GO:0005737 (0.1%)" "GO:0004817 (20%) GO:0005524 (20%) GO:0008270 (18.1%)" cysteinyl-tRNA aminoacylation (20%) "cytosol (20%) cytoplasm (0.1%)" "cysteine-tRNA ligase activity (20%) ATP binding (20%) zinc ion binding (18.1%)" "IPR014729 (14.6%) IPR024909 (14.6%) IPR032678 (14.6%)" "Rossmann-like alpha/beta/alpha sandwich fold (14.6%) Cysteinyl-tRNA synthetase/mycothiol ligase (14.6%) tRNA synthetases class I, catalytic domain (14.6%)" VKGDQMGMLATVINSLALSSALVAAGVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.4.22 (100%) UMP kinase (100%) "GO:0006225 (19.6%) GO:0044210 (19.3%)" "GO:0005737 (19.3%) GO:0016020 (2.4%)" "GO:0005524 (19.6%) GO:0033862 (19.6%) GO:0016301 (0.3%)" "UDP biosynthetic process (19.6%) 'de novo' CTP biosynthetic process (19.3%)" "cytoplasm (19.3%) membrane (2.4%)" "ATP binding (19.6%) UMP kinase activity (19.6%) kinase activity (0.3%)" "IPR001048 (25.2%) IPR036393 (25.2%) IPR011817 (24.8%)" "Aspartate/glutamate/uridylate kinase (25.2%) Acetylglutamate kinase-like superfamily (25.2%) Uridylate kinase (24.8%)" YRNAFTPTTTGEMSDALR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.3.36 (100%) 1,4-dihydroxy-2-naphthoyl-CoA synthase (100%) GO:0009234 (33.3%) GO:0005829 (33.3%) GO:0008935 (33.3%) menaquinone biosynthetic process (33.3%) cytosol (33.3%) 1,4-dihydroxy-2-naphthoyl-CoA synthase activity (33.3%) "IPR001753 (20.6%) IPR029045 (20.6%) IPR010198 (19.6%)" "Enoyl-CoA hydratase/isomerase (20.6%) ClpP/crotonase-like domain superfamily (20.6%) 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB (19.6%)" VKEPIECEYNLVR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.1.1 (100%) alanine dehydrogenase (100%) "GO:0042853 (24.4%) GO:0006524 (1.2%)" GO:0005886 (25.6%) "GO:0000286 (25.6%) GO:0000166 (23.2%)" "L-alanine catabolic process (24.4%) alanine catabolic process (1.2%)" plasma membrane (25.6%) "alanine dehydrogenase activity (25.6%) nucleotide binding (23.2%)" "IPR007698 (20.2%) IPR007886 (20.2%) IPR008143 (20.2%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (20.2%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (20.2%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 (20.2%)" QSQEELEHAYK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.3%) GO:0006879 (14.3%)" GO:0005829 (14.3%) "GO:0004322 (14.3%) GO:0008198 (14.3%) GO:0008199 (14.3%)" "iron ion transport (14.3%) intracellular iron ion homeostasis (14.3%)" cytosol (14.3%) "ferroxidase activity (14.3%) ferrous iron binding (14.3%) ferric iron binding (14.3%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" KGMVPMGMVK Bacteroidota Bacteria Pseudomonadati Bacteroidota 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.4%) GO:0043335 (16.4%) GO:0051083 (16.4%)" GO:0005737 (1.3%) "GO:0003755 (16.4%) GO:0043022 (16.4%) GO:0044183 (16.4%)" "protein transport (16.4%) protein unfolding (16.4%) 'de novo' cotranslational protein folding (16.4%)" cytoplasm (1.3%) "peptidyl-prolyl cis-trans isomerase activity (16.4%) ribosome binding (16.4%) protein folding chaperone (16.4%)" "IPR005215 (19.7%) IPR008881 (19.7%) IPR027304 (19.7%)" "Trigger factor (19.7%) Trigger factor, ribosome-binding, bacterial (19.7%) Trigger factor/SurA domain superfamily (19.7%)" MNIYTVGAATQGLSNYLK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "5.4.2.2 (73.9%) 5.4.2.- (17.4%) 1.1.1.133 (4.3%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (73.9%) Phosphotransferases (phosphomutases) (17.4%) dTDP-4-dehydrorhamnose reductase (4.3%)" "GO:0005975 (24.1%) GO:0006166 (24.1%)" "GO:0000287 (24.1%) GO:0008973 (24.1%) GO:0004614 (3.4%)" "carbohydrate metabolic process (24.1%) purine ribonucleoside salvage (24.1%)" "magnesium ion binding (24.1%) phosphopentomutase activity (24.1%) phosphoglucomutase activity (3.4%)" "IPR005844 (12.6%) IPR005845 (12.6%) IPR016055 (12.6%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (12.6%)" AAGFAEPSWIDKMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "1.1.1.18 (66.7%) 1.1.1.292 (33.3%)" "inositol 2-dehydrogenase (66.7%) 1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming) (33.3%)" "GO:0000166 (71.4%) GO:0050112 (14.3%) GO:0016491 (7.1%)" "nucleotide binding (71.4%) inositol 2-dehydrogenase (NAD+) activity (14.3%) oxidoreductase activity (7.1%)" "IPR000683 (25%) IPR004104 (25%) IPR036291 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) Gfo/Idh/MocA-like oxidoreductase, C-terminal (25%) NAD(P)-binding domain superfamily (25%)" RLDIIVVGTGLAGASAAASLGALGFK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (17%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (17%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" EFKVEANVGAPQVAYR root "GO:0032790 (19.6%) GO:0070125 (0.1%) GO:0006354 (0%)" "GO:0005737 (19.3%) GO:0005739 (0.1%) GO:0005840 (0%)" "GO:0003746 (19.7%) GO:0005525 (19.6%) GO:0003924 (19.4%)" "ribosome disassembly (19.6%) mitochondrial translational elongation (0.1%) DNA-templated transcription elongation (0%)" "cytoplasm (19.3%) mitochondrion (0.1%) ribosome (0%)" "translation elongation factor activity (19.7%) GTP binding (19.6%) GTPase activity (19.4%)" "IPR009022 (6.3%) IPR035647 (6.3%) IPR041095 (6.3%)" "Elongation factor G, domain III (6.3%) EF-G domain III/V-like (6.3%) Elongation Factor G, domain II (6.3%)" GDNEDETTGIEIVKR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17%) GO:0005737 (16%) "GO:0005524 (17%) GO:0016853 (17%) GO:0140662 (17%)" protein refolding (17%) cytoplasm (16%) "ATP binding (17%) isomerase activity (17%) ATP-dependent protein folding chaperone (17%)" "IPR001844 (17.3%) IPR002423 (17.3%) IPR027409 (17.3%)" "Chaperonin Cpn60/GroEL (17.3%) Chaperonin Cpn60/GroEL/TCP-1 family (17.3%) GroEL-like apical domain superfamily (17.3%)" ATPPFHYEPMFQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" YQDNDKAYDTNMYTRPEIER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.85 (100%) 3-isopropylmalate dehydrogenase (100%) GO:0009098 (20%) GO:0005829 (20%) "GO:0000287 (20%) GO:0003862 (20%) GO:0051287 (20%)" L-leucine biosynthetic process (20%) cytosol (20%) "magnesium ion binding (20%) 3-isopropylmalate dehydrogenase activity (20%) NAD binding (20%)" "IPR004429 (33.3%) IPR019818 (33.3%) IPR024084 (33.3%)" "Isopropylmalate dehydrogenase (33.3%) Isocitrate/isopropylmalate dehydrogenase, conserved site (33.3%) Isopropylmalate dehydrogenase-like domain (33.3%)" FGGFNVLESSVDGIQNMNPERK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033103 (50%) GO:0033104 (50%) protein secretion by the type VI secretion system (50%) type VI protein secretion system complex (50%) IPR035576 (100%) Type VI secretion system TssC (100%) GILAPDAEEQKAYLAAWDAYTNSDKTIVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" AALGTSSFMSAASFQETTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.1%) GO:0000428 (17.1%) "GO:0003677 (17.1%) GO:0003899 (17.1%) GO:0000287 (15.4%)" DNA-templated transcription (17.1%) DNA-directed RNA polymerase complex (17.1%) "DNA binding (17.1%) DNA-directed RNA polymerase activity (17.1%) magnesium ion binding (15.4%)" "IPR007081 (9.5%) IPR045867 (9.5%) IPR000722 (9%)" "RNA polymerase Rpb1, domain 5 (9.5%) DNA-directed RNA polymerase, subunit beta-prime (9.5%) RNA polymerase, alpha subunit (9%)" KINDYDIIIGGR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0009055 (100%) electron transfer activity (100%) "IPR000049 (20%) IPR012255 (20%) IPR014729 (20%)" "Electron transfer flavoprotein, beta-subunit, conserved site (20%) Electron transfer flavoprotein, beta subunit (20%) Rossmann-like alpha/beta/alpha sandwich fold (20%)" VGLKDPNKPIGTFMFLGPTGVGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0034605 (18.4%) GO:0006508 (13.3%)" GO:0005737 (18.4%) "GO:0005524 (18.4%) GO:0016887 (18.4%) GO:0008233 (13.3%)" "cellular response to heat (18.4%) proteolysis (13.3%)" cytoplasm (18.4%) "ATP binding (18.4%) ATP hydrolysis activity (18.4%) peptidase activity (13.3%)" "IPR001270 (8.5%) IPR003593 (8.5%) IPR003959 (8.5%)" "ClpA/B family (8.5%) AAA+ ATPase domain (8.5%) ATPase, AAA-type, core (8.5%)" FGAPHITK root "5.6.1.7 (99.8%) 2.5.1.19 (0.2%)" "chaperonin ATPase (99.8%) 3-phosphoshikimate 1-carboxyvinyltransferase (0.2%)" "GO:0042026 (16.8%) GO:0010267 (0.2%) GO:0008652 (0%)" "GO:0005737 (15.9%) GO:0005634 (0.2%) GO:0016020 (0%)" "GO:0005524 (17%) GO:0140662 (16.8%) GO:0016853 (16.1%)" "protein refolding (16.8%) ta-siRNA processing (0.2%) amino acid biosynthetic process (0%)" "cytoplasm (15.9%) nucleus (0.2%) membrane (0%)" "ATP binding (17%) ATP-dependent protein folding chaperone (16.8%) isomerase activity (16.1%)" "IPR001844 (16.5%) IPR002423 (16.5%) IPR027413 (16.4%)" "Chaperonin Cpn60/GroEL (16.5%) Chaperonin Cpn60/GroEL/TCP-1 family (16.5%) GroEL-like equatorial domain superfamily (16.4%)" MKECNCDLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 4.1.1.15 (100%) glutamate decarboxylase (100%) GO:0006538 (25%) GO:0005829 (25%) "GO:0004351 (25%) GO:0030170 (25%)" L-glutamate catabolic process (25%) cytosol (25%) "glutamate decarboxylase activity (25%) pyridoxal phosphate binding (25%)" "IPR002129 (25%) IPR010107 (25%) IPR015421 (25%)" "Pyridoxal phosphate-dependent decarboxylase (25%) Glutamate decarboxylase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%)" TVLIDTVDVCYSDIFLKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0009055 (23.6%) GO:0010181 (23.6%) GO:0016491 (23.6%)" "electron transfer activity (23.6%) FMN binding (23.6%) oxidoreductase activity (23.6%)" "IPR001279 (14.8%) IPR036866 (14.8%) IPR045761 (14.8%)" "Metallo-beta-lactamase (14.8%) Ribonuclease Z/Hydroxyacylglutathione hydrolase-like (14.8%) ODP domain (14.8%)" AGDITGGLPR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) GO:0000428 (16.9%) "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0000287 (16.1%)" DNA-templated transcription (16.8%) DNA-directed RNA polymerase complex (16.9%) "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) magnesium ion binding (16.1%)" "IPR007081 (9.2%) IPR045867 (9.2%) IPR007083 (9.1%)" "RNA polymerase Rpb1, domain 5 (9.2%) DNA-directed RNA polymerase, subunit beta-prime (9.2%) RNA polymerase Rpb1, domain 4 (9.1%)" DGLVLDEPANFHTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.5.1.4 (100%) inositol-3-phosphate synthase (100%) "GO:0006021 (27.8%) GO:0008654 (27.8%)" GO:0016020 (16.6%) GO:0004512 (27.8%) "inositol biosynthetic process (27.8%) phospholipid biosynthetic process (27.8%)" membrane (16.6%) inositol-3-phosphate synthase activity (27.8%) "IPR002587 (33.5%) IPR013021 (33.5%) IPR036291 (33.1%)" "Myo-inositol-1-phosphate synthase (33.5%) Myo-inositol-1-phosphate synthase, GAPDH-like (33.5%) NAD(P)-binding domain superfamily (33.1%)" RGGVGHDLSHIRPK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20%) GO:0009263 (18.2%)" "GO:0004748 (20.6%) GO:0031419 (20.6%) GO:0005524 (18.2%)" "DNA biosynthetic process (20%) deoxyribonucleotide biosynthetic process (18.2%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.6%) cobalamin binding (20.6%) ATP binding (18.2%)" "IPR000788 (25.8%) IPR050862 (25.8%) IPR013344 (25.6%)" "Ribonucleotide reductase large subunit, C-terminal (25.8%) Ribonucleoside diphosphate reductase class-2 (25.8%) Ribonucleotide reductase, adenosylcobalamin-dependent (25.6%)" HGYELTTAEGDKIGVVTSGTMSPIR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (17.3%) GO:0032259 (6.1%)" "GO:0005829 (17.3%) GO:0005960 (17.3%)" "GO:0004047 (17.3%) GO:0008483 (17.3%) GO:0008168 (6.1%)" "glycine decarboxylation via glycine cleavage system (17.3%) methylation (6.1%)" "cytosol (17.3%) glycine cleavage complex (17.3%)" "aminomethyltransferase activity (17.3%) transaminase activity (17.3%) methyltransferase activity (6.1%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" NTYIYPPEFSMK root 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) "GO:0005737 (19.7%) GO:0005739 (0.3%)" "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) "cytoplasm (19.7%) mitochondrion (0.3%)" "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (16.8%) IPR006099 (16.8%) IPR016176 (16.8%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.8%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.8%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (16.8%)" QMMGMQPGDVVCTYADTGRLEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 4.2.1.46 (100%) dTDP-glucose 4,6-dehydratase (100%) GO:0008460 (100%) dTDP-glucose 4,6-dehydratase activity (100%) "IPR001509 (50%) IPR036291 (50%)" "NAD-dependent epimerase/dehydratase (50%) NAD(P)-binding domain superfamily (50%)" LMEMAADIIMAHLLIQDATKAPELFAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.3.8.1 (100%) short-chain acyl-CoA dehydrogenase (100%) "GO:0050660 (50%) GO:0003995 (38.9%) GO:0016937 (11.1%)" "flavin adenine dinucleotide binding (50%) acyl-CoA dehydrogenase activity (38.9%) short-chain fatty acyl-CoA dehydrogenase activity (11.1%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009075 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.1%)" SGETEDATIADIAVATNSGQIK Bacteria Bacteria 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.6%) GO:0009986 (16.3%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.6%) cell surface (16.3%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020810 (16.8%) IPR036849 (16.8%)" "Enolase (16.8%) Enolase, C-terminal TIM barrel domain (16.8%) Enolase-like, C-terminal domain superfamily (16.8%)" NLDTAEKELFFSLSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006353 (25%) GO:0031564 (25%)" GO:0005829 (25%) GO:0003723 (25%) "DNA-templated transcription termination (25%) transcription antitermination (25%)" cytosol (25%) RNA binding (25%) "IPR006027 (33.3%) IPR011605 (33.3%) IPR035926 (33.3%)" "NusB/RsmB/TIM44 (33.3%) NusB antitermination factor (33.3%) NusB-like superfamily (33.3%)" EIVELTQLAHNLNPGLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.13 (100%) arabinose-5-phosphate isomerase (100%) GO:1901135 (40%) "GO:0097367 (40%) GO:0016853 (12.7%) GO:0019146 (7.3%)" carbohydrate derivative metabolic process (40%) "carbohydrate derivative binding (40%) isomerase activity (12.7%) arabinose-5-phosphate isomerase activity (7.3%)" "IPR001347 (33.3%) IPR035474 (33.3%) IPR046348 (33.3%)" "SIS domain (33.3%) KpsF-like, SIS domain (33.3%) SIS domain superfamily (33.3%)" LYYGGTEALQDSGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.18 (100%) exo-alpha-sialidase (100%) "GO:0006689 (19.4%) GO:0009313 (19.4%)" "GO:0005737 (19.4%) GO:0016020 (19.4%) GO:0042597 (1.4%)" GO:0004308 (19.4%) "ganglioside catabolic process (19.4%) oligosaccharide catabolic process (19.4%)" "cytoplasm (19.4%) membrane (19.4%) periplasmic space (1.4%)" exo-alpha-sialidase activity (19.4%) "IPR029456 (21.1%) IPR008377 (19.7%) IPR011040 (19.7%)" "Sialidase, N-terminal (21.1%) Trypanosome sialidase (19.7%) Sialidase (19.7%)" VIKDELLEIKDKFGDER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006261 (12.5%) GO:0006265 (12.5%)" "GO:0005694 (12.5%) GO:0005737 (12.5%) GO:0009330 (12.5%)" "GO:0003677 (12.5%) GO:0005524 (12.5%) GO:0034335 (12.5%)" "DNA-templated DNA replication (12.5%) DNA topological change (12.5%)" "chromosome (12.5%) cytoplasm (12.5%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.5%)" "DNA binding (12.5%) ATP binding (12.5%) DNA negative supercoiling activity (12.5%)" "IPR002205 (12.5%) IPR005743 (12.5%) IPR006691 (12.5%)" "DNA topoisomerase, type IIA, domain A (12.5%) DNA gyrase, subunit A (12.5%) DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.5%)" LADCSDKDPSKCELFLVEGDSAGGTAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (14%) GO:0006261 (11%)" "GO:0005694 (11%) GO:0005737 (11%)" "GO:0003677 (14%) GO:0005524 (14%) GO:0034335 (11%)" "DNA topological change (14%) DNA-templated DNA replication (11%)" "chromosome (11%) cytoplasm (11%)" "DNA binding (14%) ATP binding (14%) DNA negative supercoiling activity (11%)" "IPR000565 (7.6%) IPR001241 (7.6%) IPR006171 (7.6%)" "DNA topoisomerase, type IIA, subunit B (7.6%) DNA topoisomerase, type IIA (7.6%) TOPRIM domain (7.6%)" EAYNLSGDKASDLEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (51.9%) IPR041662 (48.1%)" "Tetratricopeptide-like helical domain superfamily (51.9%) SusD-like 2 (48.1%)" SVCTFSTHDMSTLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.25 (100%) 4-alpha-glucanotransferase (100%) GO:0005975 (24.8%) GO:0005737 (24.8%) "GO:0004134 (24.8%) GO:2001070 (24.8%) GO:0016757 (0.8%)" carbohydrate metabolic process (24.8%) cytoplasm (24.8%) "4-alpha-glucanotransferase activity (24.8%) starch binding (24.8%) glycosyltransferase activity (0.8%)" "IPR002044 (16.7%) IPR003385 (16.7%) IPR013783 (16.7%)" "Carbohydrate binding module family 20 (16.7%) Glycoside hydrolase, family 77 (16.7%) Immunoglobulin-like fold (16.7%)" YHLNNPMMER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.8.1 (57.1%) 1.3.8.- (14.3%) 1.3.8.7 (14.3%)" "short-chain acyl-CoA dehydrogenase (57.1%) With a flavin as acceptor (14.3%) medium-chain acyl-CoA dehydrogenase (14.3%)" "GO:0050660 (49.6%) GO:0003995 (46.6%) GO:0016937 (3%)" "flavin adenine dinucleotide binding (49.6%) acyl-CoA dehydrogenase activity (46.6%) short-chain fatty acyl-CoA dehydrogenase activity (3%)" "IPR006089 (9.1%) IPR006091 (9.1%) IPR009075 (9.1%)" "Acyl-CoA dehydrogenase, conserved site (9.1%) Acyl-CoA oxidase/dehydrogenase, middle domain (9.1%) Acyl-CoA dehydrogenase/oxidase, C-terminal (9.1%)" AIIAWGNCASAGCVQAANPNPTGAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.12.99.6 (100%) hydrogenase (acceptor) (100%) GO:0009061 (10.9%) "GO:0005886 (10.9%) GO:0009375 (10.9%) GO:0044569 (10.9%)" "GO:0008901 (10.9%) GO:0009055 (10.9%) GO:0046872 (10.9%)" anaerobic respiration (10.9%) "plasma membrane (10.9%) ferredoxin hydrogenase complex (10.9%) [Ni-Fe] hydrogenase complex (10.9%)" "ferredoxin hydrogenase activity (10.9%) electron transfer activity (10.9%) metal ion binding (10.9%)" "IPR001821 (14.3%) IPR006137 (14.3%) IPR006311 (14.3%)" "[NiFe]-hydrogenase, small subunit (14.3%) NADH:ubiquinone oxidoreductase-like, 20kDa subunit (14.3%) Twin-arginine translocation pathway, signal sequence (14.3%)" SAHKYELMFIADPELDER Bacteria Bacteria GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" YKTESNLIEGCQSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR003808 (100%) Fe-S metabolism associated domain, SufE-like (100%) GKAAGVNIFSNSSQPGAYGSR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR012910 (12.8%) IPR023996 (12.8%) IPR023997 (12.8%)" "TonB-dependent receptor, plug domain (12.8%) TonB-dependent outer membrane protein, SusC/RagA (12.8%) TonB-dependent outer membrane protein SusC/RagA, conserved site (12.8%)" GIDKQLVGNYAAK Clostridia Bacteria Bacillati Bacillota Clostridia GO:0002181 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0019843 (25%)" cytoplasmic translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000702 (20%) IPR002358 (20%) IPR019906 (20%)" "Large ribosomal subunit protein uL6-like (20%) Large ribosomal subunit protein uL6, conserved site (20%) Large ribosomal subunit protein uL6, bacteria (20%)" FLENPVMAAWHNETLWMVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (33.3%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (33.3%)" "IPR003741 (12.9%) IPR004452 (12.9%) IPR009051 (12.9%)" "LUD domain (12.9%) L-lactate oxidation iron-sulfur protein LutB/LldF (12.9%) Alpha-helical ferredoxin (12.9%)" KMSQLLDSAVFPGIQGGPLEHVIAAK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.4%) GO:0035999 (14.8%) GO:0032259 (9.9%)" "GO:0005829 (15.4%) GO:0016020 (0.6%)" "GO:0004372 (15.4%) GO:0030170 (15.4%) GO:0008168 (9.9%)" "glycine biosynthetic process from serine (15.4%) tetrahydrofolate interconversion (14.8%) methylation (9.9%)" "cytosol (15.4%) membrane (0.6%)" "glycine hydroxymethyltransferase activity (15.4%) pyridoxal phosphate binding (15.4%) methyltransferase activity (9.9%)" "IPR015421 (14.4%) IPR015422 (14.4%) IPR015424 (14.4%)" "Pyridoxal phosphate-dependent transferase, major domain (14.4%) Pyridoxal phosphate-dependent transferase, small domain (14.4%) Pyridoxal phosphate-dependent transferase (14.4%)" YIFELNPDHVLVKR root "GO:0006457 (0.1%) GO:0006974 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (19.2%) GO:0005829 (0.1%) GO:0005886 (0%)" "GO:0005524 (20.1%) GO:0016887 (20.1%) GO:0051082 (20.1%)" "protein folding (0.1%) DNA damage response (0.1%) response to heat (0.1%)" "cytoplasm (19.2%) cytosol (0.1%) plasma membrane (0%)" "ATP binding (20.1%) ATP hydrolysis activity (20.1%) unfolded protein binding (20.1%)" "IPR037196 (14.9%) IPR001404 (14.8%) IPR020568 (14.5%)" "HSP90, C-terminal domain (14.9%) Heat shock protein Hsp90 family (14.8%) Ribosomal protein uS5 domain 2-type superfamily (14.5%)" FTGWYDVDLSEKGVSEAK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "5.4.2.11 (99.8%) 5.4.2.1 (0.2%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (99.8%) Transferred entry: 5.4.2.11 and 5.4.2.12 (0.2%)" "GO:0006094 (33.1%) GO:0006096 (33.1%) GO:0061621 (0.1%)" "GO:0005737 (0.1%) GO:0005829 (0.1%)" "GO:0004619 (33%) GO:0016853 (0.4%) GO:0016868 (0.1%)" "gluconeogenesis (33.1%) glycolytic process (33.1%) canonical glycolysis (0.1%)" "cytoplasm (0.1%) cytosol (0.1%)" "phosphoglycerate mutase activity (33%) isomerase activity (0.4%) intramolecular phosphotransferase activity (0.1%)" "IPR005952 (25%) IPR013078 (25%) IPR029033 (25%)" "Phosphoglycerate mutase 1 (25%) Histidine phosphatase superfamily, clade-1 (25%) Histidine phosphatase superfamily (25%)" DYECMGDVPNVCFPCAALHDSETGR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.4.1.- (100%) Hexosyltransferases (100%) "GO:0016757 (78.9%) GO:0016787 (10.5%) GO:0016798 (10.5%)" "glycosyltransferase activity (78.9%) hydrolase activity (10.5%) hydrolase activity, acting on glycosyl bonds (10.5%)" "IPR007184 (50%) IPR023296 (50%)" "Mannoside phosphorylase (50%) Glycosyl hydrolase, five-bladed beta-propeller domain superfamily (50%)" IINDNFGIKEGLMTTVHSTTATQK NMVADGATDFTECGPGAVLQGLIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0006633 (1.3%) GO:0005829 (1.3%) "GO:0004314 (93.4%) GO:0016746 (2.6%) GO:0016740 (1.3%)" fatty acid biosynthetic process (1.3%) cytosol (1.3%) "[acyl-carrier-protein] S-malonyltransferase activity (93.4%) acyltransferase activity (2.6%) transferase activity (1.3%)" "IPR001227 (14.4%) IPR016035 (14.4%) IPR004410 (14.2%)" "Acyl transferase domain superfamily (14.4%) Acyl transferase/acyl hydrolase/lysophospholipase (14.4%) Malonyl CoA-acyl carrier protein transacylase, FabD-type (14.2%)" KGAALNAVQIAEYLLK Bacteria Bacteria 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0019877 (11.1%) GO:0009088 (11%) GO:0009089 (11%)" "GO:0046983 (11.2%) GO:0004073 (11.1%) GO:0050661 (11.1%)" "diaminopimelate biosynthetic process (11.1%) threonine biosynthetic process (11%) lysine biosynthetic process via diaminopimelate (11%)" "protein dimerization activity (11.2%) aspartate-semialdehyde dehydrogenase activity (11.1%) NADP binding (11.1%)" "IPR012280 (19.1%) IPR000534 (18.8%) IPR005986 (18.8%)" "Semialdehyde dehydrogenase, dimerisation domain (19.1%) Semialdehyde dehydrogenase, NAD-binding (18.8%) Aspartate-semialdehyde dehydrogenase, beta-type (18.8%)" VLISAPAKDETTPTVVFGVNHNILK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium "1.2.1.- (66.7%) 1.2.1.12 (33.3%)" "With NAD(+) or NADP(+) as acceptor (66.7%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (33.3%)" GO:0006006 (20%) GO:0005737 (20%) "GO:0004365 (20%) GO:0050661 (20%) GO:0051287 (20%)" glucose metabolic process (20%) cytoplasm (20%) "glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (20%) NADP binding (20%) NAD binding (20%)" "IPR006424 (20%) IPR020828 (20%) IPR020829 (20%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (20%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (20%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (20%)" LSHLQELEAESIHIIR Bacteria Bacteria 2.7.7.4 (100%) sulfate adenylyltransferase (100%) "GO:0000103 (25.2%) GO:0070814 (24.3%)" "GO:0004781 (25.2%) GO:0005524 (25.2%)" "sulfate assimilation (25.2%) hydrogen sulfide biosynthetic process (24.3%)" "sulfate adenylyltransferase (ATP) activity (25.2%) ATP binding (25.2%)" "IPR002500 (25%) IPR011784 (25%) IPR014729 (25%)" "Phosphoadenosine phosphosulphate reductase domain (25%) Sulphate adenylyltransferase, small subunit (25%) Rossmann-like alpha/beta/alpha sandwich fold (25%)" RIPITIEEVETIMNE Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0030145 (25%) GO:0070006 (25%)" proteolysis (25%) cytosol (25%) "manganese ion binding (25%) metalloaminopeptidase activity (25%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" MDAFVGHLHYLAIDPALESGYGQLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.49 (100%) glucose-6-phosphate dehydrogenase (NADP(+)) (100%) "GO:0006006 (20%) GO:0009051 (20%)" GO:0005829 (20%) "GO:0004345 (20%) GO:0050661 (20%)" "glucose metabolic process (20%) pentose-phosphate shunt, oxidative branch (20%)" cytosol (20%) "glucose-6-phosphate dehydrogenase activity (20%) NADP binding (20%)" "IPR001282 (20%) IPR019796 (20%) IPR022674 (20%)" "Glucose-6-phosphate dehydrogenase (20%) Glucose-6-phosphate dehydrogenase, active site (20%) Glucose-6-phosphate dehydrogenase, NAD-binding (20%)" VDAYIIPSSDPHLSEYPADRWK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.9 (100%) Xaa-Pro dipeptidase (100%) GO:0005737 (31.6%) "GO:0046872 (31.6%) GO:0070006 (31.6%) GO:0102009 (3.5%)" cytoplasm (31.6%) "metal ion binding (31.6%) metalloaminopeptidase activity (31.6%) proline dipeptidase activity (3.5%)" "IPR000587 (14.3%) IPR000994 (14.3%) IPR029149 (14.3%)" "Creatinase, N-terminal (14.3%) Peptidase M24 (14.3%) Creatinase/Aminopeptidase P/Spt16, N-terminal (14.3%)" HVLVEEINKLVSENLFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" DFTAIIFNDIHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.1.4.53 (100%) 3',5'-cyclic-AMP phosphodiesterase (100%) GO:0006506 (20.6%) GO:0016020 (20.6%) "GO:0003993 (21.2%) GO:0046872 (21.2%) GO:0004519 (14.1%)" GPI anchor biosynthetic process (20.6%) membrane (20.6%) "acid phosphatase activity (21.2%) metal ion binding (21.2%) endonuclease activity (14.1%)" "IPR004843 (14.2%) IPR008963 (14.2%) IPR015914 (14.2%)" "Calcineurin-like, phosphoesterase domain (14.2%) Purple acid phosphatase-like, N-terminal (14.2%) Purple acid phosphatase, N-terminal (14.2%)" EEESAAAAEVEER Bacteria Bacteria "GO:0045892 (0.1%) GO:0006355 (0%) GO:0006417 (0%)" "GO:0005829 (11%) GO:0032993 (11%) GO:0009295 (11%)" "GO:0046983 (11%) GO:0000976 (11%) GO:0001217 (11%)" "negative regulation of DNA-templated transcription (0.1%) regulation of DNA-templated transcription (0%) regulation of translation (0%)" "cytosol (11%) protein-DNA complex (11%) nucleoid (11%)" "protein dimerization activity (11%) transcription cis-regulatory region binding (11%) DNA-binding transcription repressor activity (11%)" "IPR027454 (20.2%) IPR054180 (20.2%) IPR001801 (20%)" "Histone-like protein H-NS, N-terminal (20.2%) DNA-binding protein H-NS-like, N-terminal domain (20.2%) DNA-binding protein H-NS-like (20%)" RMQEIQDIQER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" SEIDSLPTELDVIR Clostridium Bacteria Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium "GO:0034605 (18.8%) GO:0042026 (18.8%) GO:0006508 (2.9%)" GO:0005737 (18.8%) "GO:0005524 (18.8%) GO:0016887 (18.8%) GO:0008233 (2.9%)" "cellular response to heat (18.8%) protein refolding (18.8%) proteolysis (2.9%)" cytoplasm (18.8%) "ATP binding (18.8%) ATP hydrolysis activity (18.8%) peptidase activity (2.9%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" TSPYGLTGSIFAR root 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (25.4%) GO:0009898 (25.4%) "GO:0003842 (25.4%) GO:0004657 (23.7%)" L-proline catabolic process to L-glutamate (25.4%) cytoplasmic side of plasma membrane (25.4%) "L-glutamate gamma-semialdehyde dehydrogenase activity (25.4%) proline dehydrogenase activity (23.7%)" "IPR005931 (14.2%) IPR015590 (14.2%) IPR016160 (14.2%)" "Delta-1-pyrroline-5-carboxylate dehydrogenase (14.2%) Aldehyde dehydrogenase domain (14.2%) Aldehyde dehydrogenase, cysteine active site (14.2%)" HGYNIGLSGFTPAGTAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.8.3.- (97%) 3.1.2.1 (3%)" "CoA-transferases (97%) acetyl-CoA hydrolase (3%)" "GO:0006083 (24.9%) GO:0006084 (24.9%)" "GO:0003986 (24.9%) GO:0008775 (24.9%) GO:0016740 (0.2%)" "acetate metabolic process (24.9%) acetyl-CoA metabolic process (24.9%)" "acetyl-CoA hydrolase activity (24.9%) acetate CoA-transferase activity (24.9%) transferase activity (0.2%)" "IPR003702 (16.7%) IPR017821 (16.7%) IPR026888 (16.7%)" "Acetyl-CoA hydrolase/transferase, N-terminal (16.7%) Succinate CoA transferase (16.7%) Acetyl-CoA hydrolase/transferase, C-terminal domain (16.7%)" ATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELK root 2.7.4.22 (100%) UMP kinase (100%) "GO:0006225 (20.1%) GO:0044210 (18.4%) GO:0006221 (0.2%)" GO:0005829 (20.1%) "GO:0005524 (20.1%) GO:0033862 (20.1%) GO:0016301 (0.7%)" "UDP biosynthetic process (20.1%) 'de novo' CTP biosynthetic process (18.4%) pyrimidine nucleotide biosynthetic process (0.2%)" cytosol (20.1%) "ATP binding (20.1%) UMP kinase activity (20.1%) kinase activity (0.7%)" "IPR001048 (25.9%) IPR036393 (25.9%) IPR015963 (24.4%)" "Aspartate/glutamate/uridylate kinase (25.9%) Acetylglutamate kinase-like superfamily (25.9%) Uridylate kinase, bacteria (24.4%)" MNICFVMAPEYKDLEADFLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006564 (19.9%) GO:0008615 (19.9%)" GO:0005737 (19.9%) "GO:0004648 (19.9%) GO:0030170 (19.9%) GO:0008483 (0.7%)" "L-serine biosynthetic process (19.9%) pyridoxine biosynthetic process (19.9%)" cytoplasm (19.9%) "O-phospho-L-serine:2-oxoglutarate aminotransferase activity (19.9%) pyridoxal phosphate binding (19.9%) transaminase activity (0.7%)" "IPR000192 (20%) IPR015421 (20%) IPR015422 (20%)" "Aminotransferase class V domain (20%) Pyridoxal phosphate-dependent transferase, major domain (20%) Pyridoxal phosphate-dependent transferase, small domain (20%)" AYNDFSQFVAQNTTMDK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) GO:0005886 (62.5%) "GO:0016853 (34.4%) GO:0003755 (3.1%)" plasma membrane (62.5%) "isomerase activity (34.4%) peptidyl-prolyl cis-trans isomerase activity (3.1%)" "IPR027304 (50%) IPR052029 (50%)" "Trigger factor/SurA domain superfamily (50%) Periplasmic chaperone PpiD (50%)" SYDYSLVDKSAEK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0000049 (19.4%) GO:0003723 (0.6%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) tRNA binding (19.4%) RNA binding (0.6%)" "IPR001848 (25%) IPR018268 (25%) IPR027486 (25%)" "Small ribosomal subunit protein uS10 (25%) Small ribosomal subunit protein uS10, conserved site (25%) Small ribosomal subunit protein uS10 domain (25%)" AHFVNLLTGKDPENPYEVEFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR024299 (25%) IPR035376 (25%) IPR038143 (25%)" "NigD-like N-terminal OB domain (25%) NigD-like, C-terminal domain (25%) NigD-like, C-terminal domain superfamily (25%)" VSLTIEKTEEFFR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.1.1.1 (62.5%) 1.1.1.- (37.5%)" "alcohol dehydrogenase (62.5%) With NAD(+) or NADP(+) as acceptor (37.5%)" GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (16.7%) IPR011322 (16.7%) IPR018211 (16.7%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (16.7%) Nitrogen regulatory PII-like, alpha/beta (16.7%) Alcohol dehydrogenase, iron-type, conserved site (16.7%)" LFQMHSNKQNPVEVIGAGDIGAGVGFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.5%) GO:0005737 (18.4%) "GO:0003746 (20.7%) GO:0005525 (20.5%) GO:0003924 (19.9%)" ribosome disassembly (20.5%) cytoplasm (18.4%) "translation elongation factor activity (20.7%) GTP binding (20.5%) GTPase activity (19.9%)" "IPR004161 (6.3%) IPR009000 (6.3%) IPR009022 (6.3%)" "Translation elongation factor EFTu-like, domain 2 (6.3%) Translation protein, beta-barrel domain superfamily (6.3%) Elongation factor G, domain III (6.3%)" TGDTLCDENHPITLESMEFPEPVIGIAVEPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" IAEIKEMSTNDLVER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001854 (33.3%) IPR018254 (33.3%) IPR036049 (33.3%)" "Large ribosomal subunit protein uL29 (33.3%) Large ribosomal subunit protein uL29, conserved site (33.3%) Large ribosomal subunit protein uL29 superfamily (33.3%)" TNTTESQVAEVEPGVLMLNMR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.18 (100%) exo-alpha-sialidase (100%) "GO:0006689 (20.2%) GO:0009313 (20.2%)" "GO:0016020 (20.2%) GO:0005737 (19.1%)" GO:0004308 (20.2%) "ganglioside catabolic process (20.2%) oligosaccharide catabolic process (20.2%)" "membrane (20.2%) cytoplasm (19.1%)" exo-alpha-sialidase activity (20.2%) "IPR011040 (20.2%) IPR026856 (20.2%) IPR029456 (20.2%)" "Sialidase (20.2%) Sialidase family (20.2%) Sialidase, N-terminal (20.2%)" EAKDMVDGAPSTVK Pseudomonadati Bacteria Pseudomonadati GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" QSGLHTSVDCSTPLTEQSLSR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "IPR019720 (50%) IPR038307 (50%)" "Plasmid stability protein, StbB (50%) StbB superfamily (50%)" GGIAAFIDAEHAFDRFYAEK Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006281 (12.8%) GO:0006310 (12.8%) GO:0009432 (12%)" GO:0005829 (12.8%) "GO:0003697 (12.8%) GO:0005524 (12.8%) GO:0140664 (12.8%)" "DNA repair (12.8%) DNA recombination (12.8%) SOS response (12%)" cytosol (12.8%) "single-stranded DNA binding (12.8%) ATP binding (12.8%) ATP-dependent DNA damage sensor activity (12.8%)" "IPR013765 (11.5%) IPR020587 (11.5%) IPR020588 (11.5%)" "DNA recombination and repair protein RecA (11.5%) DNA recombination and repair protein RecA, monomer-monomer interface (11.5%) DNA recombination and repair protein RecA-like, ATP-binding domain (11.5%)" SLFATADDELRPVMNGVYFDIHTDDLTFVASDGHK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006271 (16.7%) "GO:0005737 (16.7%) GO:0009360 (16.7%)" "GO:0003677 (16.7%) GO:0003887 (16.7%) GO:0008408 (16.7%)" DNA strand elongation involved in DNA replication (16.7%) "cytoplasm (16.7%) DNA polymerase III complex (16.7%)" "DNA binding (16.7%) DNA-directed DNA polymerase activity (16.7%) 3'-5' exonuclease activity (16.7%)" "IPR001001 (20%) IPR022634 (20%) IPR022635 (20%)" "DNA polymerase III, beta sliding clamp (20%) DNA polymerase III, beta sliding clamp, N-terminal (20%) DNA polymerase III, beta sliding clamp, C-terminal (20%)" LNCEVIPADATSVEDLENVFKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" ATVTPANATNKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" VIGQNEAVDAVSNAIRR root "GO:0034605 (17.3%) GO:0042026 (14.8%) GO:0006508 (1.1%)" "GO:0005829 (13.7%) GO:0005737 (3.6%) GO:0016020 (0.1%)" "GO:0005524 (17.3%) GO:0016887 (17.3%) GO:0042802 (13.7%)" "cellular response to heat (17.3%) protein refolding (14.8%) proteolysis (1.1%)" "cytosol (13.7%) cytoplasm (3.6%) membrane (0.1%)" "ATP binding (17.3%) ATP hydrolysis activity (17.3%) identical protein binding (13.7%)" "IPR027417 (9%) IPR050130 (9%) IPR003959 (8.8%)" "P-loop containing nucleoside triphosphate hydrolase (9%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (9%) ATPase, AAA-type, core (8.8%)" TGYINEEDVPVLDNWRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25%) GO:0044205 (25%)" "GO:0000287 (25%) GO:0004588 (25%)" "pyrimidine nucleobase biosynthetic process (25%) 'de novo' UMP biosynthetic process (25%)" "magnesium ion binding (25%) orotate phosphoribosyltransferase activity (25%)" "IPR000836 (25%) IPR004467 (25%) IPR023031 (25%)" "Phosphoribosyltransferase domain (25%) Orotate phosphoribosyl transferase domain (25%) Orotate phosphoribosyltransferase (25%)" NTQPACHQDGEPTVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009055 (100%) electron transfer activity (100%) "IPR000049 (20%) IPR012255 (20%) IPR014729 (20%)" "Electron transfer flavoprotein, beta-subunit, conserved site (20%) Electron transfer flavoprotein, beta subunit (20%) Rossmann-like alpha/beta/alpha sandwich fold (20%)" KILADGGSVIIGSHLGRPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" IAPTDKLNIAGVGIGGMGNANLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (91.7%) GO:0050112 (8.3%)" "nucleotide binding (91.7%) inositol 2-dehydrogenase (NAD+) activity (8.3%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" QVYSLDMGALVAGAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0034605 (19.6%) GO:0042026 (19%) GO:0006508 (1.3%)" GO:0005737 (19.6%) "GO:0005524 (19.6%) GO:0016887 (19.6%) GO:0008233 (1.3%)" "cellular response to heat (19.6%) protein refolding (19%) proteolysis (1.3%)" cytoplasm (19.6%) "ATP binding (19.6%) ATP hydrolysis activity (19.6%) peptidase activity (1.3%)" "IPR003593 (8.3%) IPR003959 (8.3%) IPR004176 (8.3%)" "AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%) Clp, repeat (R) N-terminal domain (8.3%)" GLTGGHSGDDINKGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" GIYPSAVDFSTDLHSMGQWIQEGER Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.2%) GO:0006096 (14.2%) GO:0051156 (14.2%)" GO:0005829 (14.2%) "GO:0004347 (14.2%) GO:0048029 (14.2%) GO:0097367 (14.2%)" "gluconeogenesis (14.2%) glycolytic process (14.2%) glucose 6-phosphate metabolic process (14.2%)" cytosol (14.2%) "glucose-6-phosphate isomerase activity (14.2%) monosaccharide binding (14.2%) carbohydrate derivative binding (14.2%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" SIEEALPYYENVLGLK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "5.1.99.1 (98.1%) 4.4.1.5 (1%) 5.1.99.- (1%)" "methylmalonyl-CoA epimerase (98.1%) lactoylglutathione lyase (1%) Acting on other compounds (1%)" GO:0046491 (47.3%) "GO:0004493 (47.3%) GO:0016829 (3.3%) GO:0051213 (1.5%)" L-methylmalonyl-CoA metabolic process (47.3%) "methylmalonyl-CoA epimerase activity (47.3%) lyase activity (3.3%) dioxygenase activity (1.5%)" "IPR029068 (25%) IPR037523 (25%) IPR051785 (25%)" "Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%) Methylmalonyl-CoA/ethylmalonyl-CoA epimerase (25%)" AKIEVPVDAK Bacteria Bacteria "IPR011990 (47.6%) IPR019734 (47.6%) IPR029046 (2.4%)" "Tetratricopeptide-like helical domain superfamily (47.6%) Tetratricopeptide repeat (47.6%) Lipoprotein localisation LolA/LolB/LppX (2.4%)" NRNPEGEVIEILER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.1.13.1 (100%) exoribonuclease II (100%) GO:0006402 (24.8%) GO:0005829 (24.8%) "GO:0003723 (24.8%) GO:0008859 (24.8%) GO:0004527 (1%)" mRNA catabolic process (24.8%) cytosol (24.8%) "RNA binding (24.8%) exoribonuclease II activity (24.8%) exonuclease activity (1%)" "IPR012340 (11.4%) IPR013223 (11.4%) IPR040476 (11.4%)" "Nucleic acid-binding, OB-fold (11.4%) Ribonuclease B, N-terminal OB domain (11.4%) RNase II/RNase R, cold shock domain (11.4%)" TLIDEVTIPAGQLADR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0036376 (33.3%) GO:0005886 (33.3%) GO:0015081 (33.3%) sodium ion export across plasma membrane (33.3%) plasma membrane (33.3%) sodium ion transmembrane transporter activity (33.3%) "IPR001322 (33.3%) IPR005899 (33.3%) IPR036415 (33.3%)" "Lamin tail domain (33.3%) Sodium ion-translocating decarboxylase (33.3%) Lamin tail domain superfamily (33.3%)" ALTAISDEEVIYKEEHSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (19.9%) GO:0005829 (19.9%) "GO:0002161 (20%) GO:0004832 (20%) GO:0005524 (20%)" valyl-tRNA aminoacylation (19.9%) cytosol (19.9%) "aminoacyl-tRNA deacylase activity (20%) valine-tRNA ligase activity (20%) ATP binding (20%)" "IPR002300 (9.2%) IPR002303 (9.2%) IPR009008 (9.2%)" "Aminoacyl-tRNA synthetase, class Ia (9.2%) Valine-tRNA ligase (9.2%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (9.2%)" TDLDKLVIEMETNGTIDPEEAIRR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.6%) GO:0006352 (0%) GO:0006879 (0%)" "GO:0000428 (16.8%) GO:0005737 (16.4%) GO:0000345 (0%)" "GO:0003899 (16.6%) GO:0046983 (16.6%) GO:0003677 (16.6%)" "DNA-templated transcription (16.6%) DNA-templated transcription initiation (0%) intracellular iron ion homeostasis (0%)" "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.4%) cytosolic DNA-directed RNA polymerase complex (0%)" "DNA-directed RNA polymerase activity (16.6%) protein dimerization activity (16.6%) DNA binding (16.6%)" "IPR011263 (16.8%) IPR036603 (16.8%) IPR036643 (16.7%)" "DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) RNA polymerase, RBP11-like subunit (16.8%) DNA-directed RNA polymerase, insert domain superfamily (16.7%)" IHSIGAGAFIAEIQQTSDITYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) "GO:0005975 (32.2%) GO:0009298 (3.4%)" "GO:0004476 (32.2%) GO:0008270 (32.2%)" "carbohydrate metabolic process (32.2%) GDP-mannose biosynthetic process (3.4%)" "mannose-6-phosphate isomerase activity (32.2%) zinc ion binding (32.2%)" "IPR011051 (16.4%) IPR014628 (16.4%) IPR014710 (16.4%)" "RmlC-like cupin domain superfamily (16.4%) Mannose-6-phosphate isomerase, Firmicutes type, short form (16.4%) RmlC-like jelly roll fold (16.4%)" KEFDEQLGDSYPIPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR011990 (51.4%) IPR041662 (48.6%)" "Tetratricopeptide-like helical domain superfamily (51.4%) SusD-like 2 (48.6%)" GMDKLYDFANR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" KGETLADTISVISTYVDAIVMR root "2.1.3.2 (99.8%) 2.1.3.- (0.1%) 2.1.3.3 (0.1%)" "aspartate carbamoyltransferase (99.8%) Carboxy- and carbamoyltransferases (0.1%) ornithine carbamoyltransferase (0.1%)" "GO:0006520 (16.5%) GO:0006207 (16.4%) GO:0044205 (16.3%)" "GO:0005829 (16.6%) GO:0005737 (0%) GO:0009347 (0%)" "GO:0016597 (16.6%) GO:0004070 (16.5%) GO:0016740 (0.2%)" "amino acid metabolic process (16.5%) 'de novo' pyrimidine nucleobase biosynthetic process (16.4%) 'de novo' UMP biosynthetic process (16.3%)" "cytosol (16.6%) cytoplasm (0%) aspartate carbamoyltransferase complex (0%)" "amino acid binding (16.6%) aspartate carbamoyltransferase activity (16.5%) transferase activity (0.2%)" "IPR006132 (20%) IPR036901 (20%) IPR006130 (20%)" "Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20%) Aspartate/ornithine carbamoyltransferase superfamily (20%) Aspartate/ornithine carbamoyltransferase (20%)" LLFALQDNIKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR021857 (100%) Protein of unknown function DUF3467 (100%) EIEPLLSAGLIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.5.1.108 (54.5%) 4.2.1.59 (44.7%) 4.2.1.- (0.8%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase (54.5%) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (44.7%) Hydro-lyases (0.8%)" "GO:0009245 (14.7%) GO:0006633 (13.6%)" "GO:0016020 (14.7%) GO:0005737 (13.8%)" "GO:0103117 (14.7%) GO:0046872 (14.5%) GO:0019171 (12.1%)" "lipid A biosynthetic process (14.7%) fatty acid biosynthetic process (13.6%)" "membrane (14.7%) cytoplasm (13.8%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.7%) metal ion binding (14.5%) (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (12.1%)" "IPR004463 (14.6%) IPR011334 (14.6%) IPR020568 (14.6%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.6%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.6%) Ribosomal protein uS5 domain 2-type superfamily (14.6%)" AIIDSDLGIMPENNGEIIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006415 (29.7%) GO:0006412 (4%)" GO:0005737 (32.6%) GO:0043023 (33.7%) "translational termination (29.7%) translation (4%)" cytoplasm (32.6%) ribosomal large subunit binding (33.7%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" SQYEQLAEQNRK Mammalia Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia "GO:0045109 (14.7%) GO:0008544 (9%) GO:0030855 (9%)" "GO:0045095 (14.9%) GO:0005829 (8%) GO:0001533 (5.9%)" "GO:0030280 (14.9%) GO:0046982 (5.9%) GO:0005198 (0.4%)" "intermediate filament organization (14.7%) epidermis development (9%) epithelial cell differentiation (9%)" "keratin filament (14.9%) cytosol (8%) cornified envelope (5.9%)" "structural constituent of skin epidermis (14.9%) protein heterodimerization activity (5.9%) structural molecule activity (0.4%)" "IPR002957 (33.8%) IPR039008 (33.8%) IPR018039 (32.5%)" "Keratin, type I (33.8%) Intermediate filament, rod domain (33.8%) Intermediate filament protein, conserved site (32.5%)" DSERDEVTYR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.7.6.5 (100%) GTP diphosphokinase (100%) GO:0015969 (39%) GO:0005886 (39%) "GO:0008728 (7.3%) GO:0016301 (7.3%) GO:0016787 (4.9%)" guanosine tetraphosphate metabolic process (39%) plasma membrane (39%) "GTP diphosphokinase activity (7.3%) kinase activity (7.3%) hydrolase activity (4.9%)" "IPR002912 (10%) IPR004095 (10%) IPR004811 (10%)" "ACT domain (10%) TGS (10%) RelA/SpoT family (10%)" KYNAQEALDMGLVNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.3.36 (100%) 1,4-dihydroxy-2-naphthoyl-CoA synthase (100%) GO:0009234 (33.5%) GO:0005829 (33%) GO:0008935 (33.5%) menaquinone biosynthetic process (33.5%) cytosol (33%) 1,4-dihydroxy-2-naphthoyl-CoA synthase activity (33.5%) "IPR001753 (20.1%) IPR018376 (20.1%) IPR029045 (20.1%)" "Enoyl-CoA hydratase/isomerase (20.1%) Enoyl-CoA hydratase/isomerase, conserved site (20.1%) ClpP/crotonase-like domain superfamily (20.1%)" DKGDLSENAEYDAAKEAQGIMEAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006354 (20%) GO:0032784 (20%)" "GO:0003677 (20%) GO:0003746 (20%) GO:0070063 (20%)" "DNA-templated transcription elongation (20%) regulation of DNA-templated transcription elongation (20%)" "DNA binding (20%) translation elongation factor activity (20%) RNA polymerase binding (20%)" "IPR001437 (12.5%) IPR006359 (12.5%) IPR018151 (12.5%)" "Transcription elongation factor, GreA/GreB, C-terminal (12.5%) Transcription elongation factor GreA (12.5%) Transcription elongation factor, GreA/GreB, conserved site (12.5%)" RYDLGEVGR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (18.9%) GO:0006508 (0.2%) GO:0006412 (0%)" "GO:0000428 (18.8%) GO:0009507 (2.8%) GO:0009536 (2.3%)" "GO:0003677 (18.9%) GO:0003899 (18.9%) GO:0032549 (18.8%)" "DNA-templated transcription (18.9%) proteolysis (0.2%) translation (0%)" "DNA-directed RNA polymerase complex (18.8%) chloroplast (2.8%) plastid (2.3%)" "DNA binding (18.9%) DNA-directed RNA polymerase activity (18.9%) ribonucleoside binding (18.8%)" "IPR007642 (7.9%) IPR015712 (7.9%) IPR007645 (7.9%)" "RNA polymerase Rpb2, domain 2 (7.9%) DNA-directed RNA polymerase, subunit 2 (7.9%) RNA polymerase Rpb2, domain 3 (7.9%)" SESAIPAEQFK root "GO:0006412 (24.7%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.6%) GO:0005840 (0.6%) GO:1990904 (0.1%)" "GO:0003735 (24.7%) GO:0003729 (24.7%) GO:0003676 (0.1%)" "translation (24.7%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.6%) ribosome (0.6%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.7%) mRNA binding (24.7%) nucleic acid binding (0.1%)" "IPR012340 (20.2%) IPR035104 (20.2%) IPR003029 (20.1%)" "Nucleic acid-binding, OB-fold (20.2%) Ribosomal protein S1-like (20.2%) S1 domain (20.1%)" FAELLGDCVWDTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.11.1.1 (97.2%) 1.14.13.81 (2.8%)" "NADH peroxidase (97.2%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (2.8%)" "GO:0005506 (50%) GO:0016491 (19%) GO:0004601 (17.1%)" "iron ion binding (50%) oxidoreductase activity (19%) peroxidase activity (17.1%)" "IPR003251 (12.6%) IPR009040 (12.6%) IPR009078 (12.6%)" "Rubrerythrin, diiron-binding domain (12.6%) Ferritin-like diiron domain (12.6%) Ferritin-like superfamily (12.6%)" LVPHQEAPTNICWGDRNR root "6.3.1.2 (80.9%) 6.3.1.- (19.1%)" "glutamine synthetase (80.9%) Acid--ammonia (or amine) ligases (amide synthases) (19.1%)" "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" "GO:0004356 (20%) GO:0016874 (0.1%)" "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" "glutamine synthetase activity (20%) ligase activity (0.1%)" "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" YFQGDELAAR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0071897 (20.4%) GO:0009263 (17.2%)" "GO:0004748 (20.7%) GO:0031419 (20.6%) GO:0005524 (17.2%)" "DNA biosynthetic process (20.4%) deoxyribonucleotide biosynthetic process (17.2%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20.7%) cobalamin binding (20.6%) ATP binding (17.2%)" "IPR000788 (26%) IPR013344 (26%) IPR050862 (26%)" "Ribonucleotide reductase large subunit, C-terminal (26%) Ribonucleotide reductase, adenosylcobalamin-dependent (26%) Ribonucleoside diphosphate reductase class-2 (26%)" LYTSLGDAAVGR root 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (10.9%)" "GO:0005737 (11.1%) GO:0002189 (11.1%) GO:0005829 (0%)" "GO:0004749 (11.1%) GO:0000287 (11.1%) GO:0016301 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (10.9%)" "cytoplasm (11.1%) ribose phosphate diphosphokinase complex (11.1%) cytosol (0%)" "ribose phosphate diphosphokinase activity (11.1%) magnesium ion binding (11.1%) kinase activity (11.1%)" "IPR029099 (17%) IPR005946 (16.9%) IPR029057 (16.9%)" "Ribose-phosphate pyrophosphokinase, N-terminal domain (17%) Ribose-phosphate pyrophosphokinase (16.9%) Phosphoribosyltransferase-like (16.9%)" EVGSLQCTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) GO:0004565 (50%) carbohydrate metabolic process (50%) beta-galactosidase activity (50%) "IPR001944 (12.5%) IPR008979 (12.5%) IPR017853 (12.5%)" "Glycoside hydrolase, family 35 (12.5%) Galactose-binding-like domain superfamily (12.5%) Glycoside hydrolase superfamily (12.5%)" IIATDGVFSMDGNVAPMDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.29 (98.3%) 2.3.1.50 (1.7%)" "glycine C-acetyltransferase (98.3%) serine C-palmitoyltransferase (1.7%)" "GO:0030148 (14.3%) GO:0019518 (14%) GO:0006567 (0.6%)" "GO:0005829 (14.6%) GO:0016020 (14.3%)" "GO:0008890 (14.6%) GO:0030170 (14.6%) GO:0004758 (7.4%)" "sphingolipid biosynthetic process (14.3%) L-threonine catabolic process to glycine (14%) L-threonine catabolic process (0.6%)" "cytosol (14.6%) membrane (14.3%)" "glycine C-acetyltransferase activity (14.6%) pyridoxal phosphate binding (14.6%) serine C-palmitoyltransferase activity (7.4%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" TRVPDMSAYRK root "GO:0006524 (20%) GO:0043201 (20%) GO:0006355 (19.4%)" "GO:0005829 (20%) GO:0005886 (0%) GO:0032993 (0%)" "GO:0043565 (20%) GO:0042802 (0%) GO:0000976 (0%)" "alanine catabolic process (20%) response to L-leucine (20%) regulation of DNA-templated transcription (19.4%)" "cytosol (20%) plasma membrane (0%) protein-DNA complex (0%)" "sequence-specific DNA binding (20%) identical protein binding (0%) transcription cis-regulatory region binding (0%)" "IPR011008 (12.8%) IPR019887 (12.8%) IPR019888 (12.5%)" "Dimeric alpha-beta barrel (12.8%) Transcription regulator AsnC/Lrp, ligand binding domain (12.8%) Transcription regulator AsnC-like (12.5%)" YREELVGEANYAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (32.9%) "GO:0004476 (33.5%) GO:0008270 (33.5%)" carbohydrate metabolic process (32.9%) "mannose-6-phosphate isomerase activity (33.5%) zinc ion binding (33.5%)" "IPR011051 (16.8%) IPR014710 (16.8%) IPR046457 (16.8%)" "RmlC-like cupin domain superfamily (16.8%) RmlC-like jelly roll fold (16.8%) Phosphomannose isomerase type I, catalytic domain (16.8%)" EVSNRDDVEQR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "5.4.99.27 (93.6%) 5.4.99.- (6.4%)" "tRNA pseudouridine(13) synthase (93.6%) Transferring other groups (6.4%)" "GO:0031119 (20.6%) GO:0001522 (2.2%) GO:0008033 (1.9%)" GO:0005829 (22.6%) "GO:0003723 (22.6%) GO:0160150 (16%) GO:0009982 (6.8%)" "tRNA pseudouridine synthesis (20.6%) pseudouridine synthesis (2.2%) tRNA processing (1.9%)" cytosol (22.6%) "RNA binding (22.6%) tRNA pseudouridine(13) synthase activity (16%) pseudouridine synthase activity (6.8%)" "IPR001656 (14.5%) IPR020103 (14.5%) IPR050170 (14.5%)" "Pseudouridine synthase, TruD (14.5%) Pseudouridine synthase, catalytic domain superfamily (14.5%) tRNA pseudouridine synthase D (14.5%)" YVADTDYVVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.3.1.108 (100%) caffeoyl-CoA reductase (100%) GO:0033539 (33.1%) "GO:0009055 (33.1%) GO:0050660 (33.1%) GO:0016491 (0.6%)" fatty acid beta-oxidation using acyl-CoA dehydrogenase (33.1%) "electron transfer activity (33.1%) flavin adenine dinucleotide binding (33.1%) oxidoreductase activity (0.6%)" "IPR001308 (16.7%) IPR014729 (16.7%) IPR014730 (16.7%)" "Electron transfer flavoprotein alpha subunit/FixB (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (16.7%)" RPAQAPTTASGDPVVTRPAASTTQGAVKTPLPGVILQVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.1.70 (100%) Transferred entry: 7.2.4.5 (100%) GO:0016829 (100%) lyase activity (100%) "IPR000089 (25%) IPR001882 (25%) IPR011053 (25%)" "Biotin/lipoyl attachment (25%) Biotin-binding site (25%) Single hybrid motif (25%)" FDHFNINVLDLEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.4.1.5 (100%) lactoylglutathione lyase (100%) GO:0019243 (20%) GO:0005737 (20%) "GO:0004462 (40%) GO:0016829 (20%)" methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (20%) cytoplasm (20%) "lactoylglutathione lyase activity (40%) lyase activity (20%)" "IPR004360 (33.3%) IPR029068 (33.3%) IPR037523 (33.3%)" "Glyoxalase/fosfomycin resistance/dioxygenase domain (33.3%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (33.3%) Vicinal oxygen chelate (VOC), core domain (33.3%)" AQYPHIDCVVGNIATGEAAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" EAMDTHGFGMSSVR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (14%) GO:0030148 (14%)" "GO:0016020 (14%) GO:0005829 (13.2%)" "GO:0008890 (14%) GO:0030170 (14%) GO:0004758 (9.3%)" "L-threonine catabolic process to glycine (14%) sphingolipid biosynthetic process (14%)" "membrane (14%) cytosol (13.2%)" "glycine C-acetyltransferase activity (14%) pyridoxal phosphate binding (14%) serine C-palmitoyltransferase activity (9.3%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" LDGDNVKDCK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.5.1.4 (100%) inositol-3-phosphate synthase (100%) "GO:0006021 (27.6%) GO:0008654 (27.6%)" GO:0016020 (17.3%) GO:0004512 (27.6%) "inositol biosynthetic process (27.6%) phospholipid biosynthetic process (27.6%)" membrane (17.3%) inositol-3-phosphate synthase activity (27.6%) "IPR002587 (33.5%) IPR013021 (33.5%) IPR036291 (32.9%)" "Myo-inositol-1-phosphate synthase (33.5%) Myo-inositol-1-phosphate synthase, GAPDH-like (33.5%) NAD(P)-binding domain superfamily (32.9%)" AALQTNSFMSAASFQETTK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17%) GO:0000428 (17%) "GO:0003677 (17%) GO:0003899 (17%) GO:0000287 (15.8%)" DNA-templated transcription (17%) DNA-directed RNA polymerase complex (17%) "DNA binding (17%) DNA-directed RNA polymerase activity (17%) magnesium ion binding (15.8%)" "IPR007081 (9.4%) IPR045867 (9.4%) IPR000722 (9%)" "RNA polymerase Rpb1, domain 5 (9.4%) DNA-directed RNA polymerase, subunit beta-prime (9.4%) RNA polymerase, alpha subunit (9%)" IVGETGGKNFIFAHPSAPALDVATAIVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (25%) GO:0009898 (25%) "GO:0003842 (25%) GO:0004657 (25%)" L-proline catabolic process to L-glutamate (25%) cytoplasmic side of plasma membrane (25%) "L-glutamate gamma-semialdehyde dehydrogenase activity (25%) proline dehydrogenase activity (25%)" "IPR005931 (14.3%) IPR015590 (14.3%) IPR016160 (14.3%)" "Delta-1-pyrroline-5-carboxylate dehydrogenase (14.3%) Aldehyde dehydrogenase domain (14.3%) Aldehyde dehydrogenase, cysteine active site (14.3%)" GIDNAGDKLQEK Lactobacillaceae Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae QLTDEQLIEAGVRPDLIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.5.1.49 (60%) 4.4.1.11 (40%)" "O-acetylhomoserine aminocarboxypropyltransferase (60%) methionine gamma-lyase (40%)" "GO:0006535 (14%) GO:0019346 (14%) GO:0071269 (14%)" GO:0005737 (14%) "GO:0003961 (14%) GO:0004124 (14%) GO:0030170 (14%)" "cysteine biosynthetic process from serine (14%) transsulfuration (14%) L-homocysteine biosynthetic process (14%)" cytoplasm (14%) "O-acetylhomoserine aminocarboxypropyltransferase activity (14%) cysteine synthase activity (14%) pyridoxal phosphate binding (14%)" "IPR000277 (20%) IPR006235 (20%) IPR015421 (20%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (20%) O-acetylhomoserine/O-acetylserine sulfhydrylase (20%) Pyridoxal phosphate-dependent transferase, major domain (20%)" VGDEVEAVILTLDRDERK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.9%) GO:0022627 (24.9%) "GO:0003729 (24.9%) GO:0003735 (24.9%) GO:0004654 (0.4%)" translation (24.9%) cytosolic small ribosomal subunit (24.9%) "mRNA binding (24.9%) structural constituent of ribosome (24.9%) polyribonucleotide nucleotidyltransferase activity (0.4%)" "IPR003029 (23.4%) IPR012340 (23.4%) IPR035104 (23.4%)" "S1 domain (23.4%) Nucleic acid-binding, OB-fold (23.4%) Ribosomal protein S1-like (23.4%)" TECAVDAIR root "4.1.2.14 (52.1%) 4.1.3.42 (46%) 4.1.1.112 (0.5%)" "2-dehydro-3-deoxy-phosphogluconate aldolase (52.1%) (4S)-4-hydroxy-2-oxoglutarate aldolase (46%) oxaloacetate decarboxylase (0.5%)" "GO:0009255 (0.6%) GO:0019521 (0.3%) GO:0042026 (0.3%)" "GO:0005737 (28.8%) GO:0005829 (0.6%) GO:0016020 (0.3%)" "GO:0008675 (23.9%) GO:0008700 (23.3%) GO:0016829 (9.4%)" "Entner-Doudoroff pathway through 6-phosphogluconate (0.6%) D-gluconate metabolic process (0.3%) protein refolding (0.3%)" "cytoplasm (28.8%) cytosol (0.6%) membrane (0.3%)" "2-dehydro-3-deoxy-phosphogluconate aldolase activity (23.9%) (R,S)-4-hydroxy-2-oxoglutarate aldolase activity (23.3%) lyase activity (9.4%)" "IPR000887 (24.7%) IPR013785 (24.7%) IPR031337 (24.7%)" "KDPG/KHG aldolase (24.7%) Aldolase-type TIM barrel (24.7%) KDPG/KHG aldolase, active site 1 (24.7%)" QIVLNCGEEPSVVANTVK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (16.2%) GO:1990220 (0.1%) GO:0005829 (0%)" "GO:0005524 (17%) GO:0140662 (17%) GO:0016853 (16.6%)" "protein refolding (17%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (16.2%) GroEL-GroES complex (0.1%) cytosol (0%)" "ATP binding (17%) ATP-dependent protein folding chaperone (17%) isomerase activity (16.6%)" "IPR001844 (16.9%) IPR002423 (16.9%) IPR027413 (16.9%)" "Chaperonin Cpn60/GroEL (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.9%) GroEL-like equatorial domain superfamily (16.9%)" KMDLYTQYAVAVAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.6%) IPR014030 (14.6%) IPR016039 (14.6%)" "Beta-ketoacyl synthase (14.6%) Beta-ketoacyl synthase-like, N-terminal (14.6%) Thiolase-like (14.6%)" HGTTSIFPTLSSSTIPMIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.1.25 (100%) N-acetylglucosamine-6-phosphate deacetylase (100%) GO:0006046 (33.5%) "GO:0008448 (33.5%) GO:0046872 (32.6%) GO:0016787 (0.5%)" N-acetylglucosamine catabolic process (33.5%) "N-acetylglucosamine-6-phosphate deacetylase activity (33.5%) metal ion binding (32.6%) hydrolase activity (0.5%)" "IPR006680 (25.1%) IPR011059 (25.1%) IPR032466 (25.1%)" "Amidohydrolase-related (25.1%) Metal-dependent hydrolase, composite domain superfamily (25.1%) Metal-dependent hydrolase (25.1%)" KLCAFELQEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (16.7%) GO:0032259 (8.3%)" "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004047 (16.7%) GO:0008483 (16.7%) GO:0008168 (8.3%)" "glycine decarboxylation via glycine cleavage system (16.7%) methylation (8.3%)" "cytosol (16.7%) glycine cleavage complex (16.7%)" "aminomethyltransferase activity (16.7%) transaminase activity (16.7%) methyltransferase activity (8.3%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" KLNKPDLQVK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0006865 (33.2%) GO:0015813 (0%) GO:0070778 (0%)" "GO:0005576 (33.2%) GO:0030288 (33.2%) GO:0016020 (0%)" "GO:0016595 (0%) GO:0070335 (0%)" "amino acid transport (33.2%) L-glutamate transmembrane transport (0%) L-aspartate transmembrane transport (0%)" "extracellular region (33.2%) outer membrane-bounded periplasmic space (33.2%) membrane (0%)" "glutamate binding (0%) aspartate binding (0%)" "IPR001638 (50%) IPR051455 (50%)" "Solute-binding protein family 3/N-terminal domain of MltF (50%) Bacterial solute-binding protein 3 (50%)" AEQQLDKDSAIVPVYYYVNAR root "GO:0015833 (20.3%) GO:0015031 (19.5%) GO:0006857 (0%)" "GO:0030288 (20.2%) GO:0043190 (19.5%) GO:0005886 (0%)" "GO:1904680 (20.3%) GO:1900750 (0%)" "peptide transport (20.3%) protein transport (19.5%) oligopeptide transport (0%)" "outer membrane-bounded periplasmic space (20.2%) ATP-binding cassette (ABC) transporter complex (19.5%) plasma membrane (0%)" "peptide transmembrane transporter activity (20.3%) oligopeptide binding (0%)" "IPR039424 (25.5%) IPR000914 (25.4%) IPR030678 (24.7%)" "Solute-binding protein family 5 (25.5%) Solute-binding protein family 5 domain (25.4%) Peptide/nickel binding protein, MppA-type (24.7%)" IFDFVKPGVITGDDVQK root "4.1.2.13 (99.9%) 4.1.2.- (0.1%)" "fructose-bisphosphate aldolase (99.9%) Aldehyde-lyases (0.1%)" "GO:0006096 (19.9%) GO:0006094 (19.9%)" GO:0005829 (19.9%) "GO:0004332 (20.1%) GO:0008270 (19.9%) GO:0016829 (0.2%)" "glycolytic process (19.9%) gluconeogenesis (19.9%)" cytosol (19.9%) "fructose-bisphosphate aldolase activity (20.1%) zinc ion binding (19.9%) lyase activity (0.2%)" "IPR000771 (33.3%) IPR006411 (33.3%) IPR013785 (33.3%)" "Fructose-bisphosphate aldolase, class-II (33.3%) Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype (33.3%) Aldolase-type TIM barrel (33.3%)" LQLFLFGEKDKQAPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.9%) IPR012944 (33.9%) IPR033985 (32.1%)" "Tetratricopeptide-like helical domain superfamily (33.9%) RagB/SusD domain (33.9%) SusD-like, N-terminal (32.1%)" AGDQIQSGVDAAIKPGNTLPMR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0002181 (16.4%) GO:0000027 (0.1%) GO:0032297 (0.1%)" "GO:0015934 (16.3%) GO:0005829 (16%) GO:0005840 (1.1%)" "GO:0016740 (16.5%) GO:0003735 (16.4%) GO:0019843 (16.1%)" "cytoplasmic translation (16.4%) ribosomal large subunit assembly (0.1%) negative regulation of DNA-templated DNA replication initiation (0.1%)" "large ribosomal subunit (16.3%) cytosol (16%) ribosome (1.1%)" "transferase activity (16.5%) structural constituent of ribosome (16.4%) rRNA binding (16.1%)" "IPR002171 (11.2%) IPR005880 (11.2%) IPR012340 (11.2%)" "Large ribosomal subunit protein uL2 (11.2%) Large ribosomal subunit protein uL2, bacteria/organella (11.2%) Nucleic acid-binding, OB-fold (11.2%)" QVQQPVMDRYQQHGMAPLTQEQKPVAK root 3.4.24.- (100%) Metalloendopeptidases (100%) "GO:0000917 (13.6%) GO:0043093 (13.6%) GO:0051258 (13.6%)" "GO:0005737 (14.3%) GO:0032153 (14.3%) GO:0005886 (0.1%)" "GO:0003924 (14.3%) GO:0005525 (14.3%) GO:0016787 (0.1%)" "division septum assembly (13.6%) FtsZ-dependent cytokinesis (13.6%) protein polymerization (13.6%)" "cytoplasm (14.3%) cell division site (14.3%) plasma membrane (0.1%)" "GTPase activity (14.3%) GTP binding (14.3%) hydrolase activity (0.1%)" "IPR008280 (11.3%) IPR018316 (11.3%) IPR024757 (11.3%)" "Tubulin/FtsZ, C-terminal (11.3%) Tubulin/FtsZ, 2-layer sandwich domain (11.3%) Cell division protein FtsZ, C-terminal (11.3%)" ELLPDSWETWWKDPETK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004825 (16.7%) GO:0005524 (16.7%)" methionyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) methionine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR001412 (8.3%) IPR002547 (8.3%) IPR004495 (8.3%)" "Aminoacyl-tRNA synthetase, class I, conserved site (8.3%) tRNA-binding domain (8.3%) Methionyl-tRNA synthetase, beta subunit, C-terminal (8.3%)" IDGDIQFVDENGKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) IPR029044 (100%) Nucleotide-diphospho-sugar transferases (100%) CTDSDAYQQASFYVYK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) VDQSALTEMIFTDSIPYAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.1%) GO:0006164 (11.1%) GO:0009156 (11.1%)" "GO:0002189 (11.1%) GO:0005737 (11.1%)" "GO:0000287 (11.1%) GO:0004749 (11.1%) GO:0005524 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.1%) purine nucleotide biosynthetic process (11.1%) ribonucleoside monophosphate biosynthetic process (11.1%)" "ribose phosphate diphosphokinase complex (11.1%) cytoplasm (11.1%)" "magnesium ion binding (11.1%) ribose phosphate diphosphokinase activity (11.1%) ATP binding (11.1%)" "IPR000836 (20%) IPR000842 (20%) IPR005946 (20%)" "Phosphoribosyltransferase domain (20%) Phosphoribosyl pyrophosphate synthetase, conserved site (20%) Ribose-phosphate pyrophosphokinase (20%)" IVSGEGDDSQVSFEK Bacteria Bacteria "GO:0000977 (50%) GO:0032422 (50%)" "RNA polymerase II transcription regulatory region sequence-specific DNA binding (50%) purine-rich negative regulatory element binding (50%)" IPR006628 (100%) Purine-rich element binding protein family (100%) ERRDDFANETADDAEAGDSEE Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006412 (24.8%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0022627 (24.7%) GO:0005840 (0.6%) GO:0005737 (0.1%)" "GO:0003735 (24.8%) GO:0070181 (24.7%) GO:0019843 (0.1%)" "translation (24.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (24.7%) ribosome (0.6%) cytoplasm (0.1%)" "structural constituent of ribosome (24.8%) small ribosomal subunit rRNA binding (24.7%) rRNA binding (0.1%)" "IPR014717 (20.1%) IPR035980 (20.1%) IPR000529 (20%)" "Translation elongation factor EF1B/small ribosomal subunit protein bS6 (20.1%) Small ribosomal subunit protein bS6 superfamily (20.1%) Small ribosomal subunit protein bS6 (20%)" YAVVATTRPETIMGDTAMCINPNDPKNAWLKG Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.9 (100%) valine--tRNA ligase (100%) GO:0006438 (20%) GO:0005829 (20%) "GO:0002161 (20%) GO:0004832 (20%) GO:0005524 (20%)" valyl-tRNA aminoacylation (20%) cytosol (20%) "aminoacyl-tRNA deacylase activity (20%) valine-tRNA ligase activity (20%) ATP binding (20%)" "IPR001412 (9.1%) IPR002300 (9.1%) IPR002303 (9.1%)" "Aminoacyl-tRNA synthetase, class I, conserved site (9.1%) Aminoacyl-tRNA synthetase, class Ia (9.1%) Valine-tRNA ligase (9.1%)" VSSKIEIIENLLNKVDNLIITGGMTYTFTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" MDIEEIKDFRPLILVAEDDDSNFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0000160 (100%) phosphorelay signal transduction system (100%) "IPR001789 (50%) IPR011006 (50%)" "Signal transduction response regulator, receiver domain (50%) CheY-like superfamily (50%)" IKDGDIIEINIPER Bacteria Bacteria 4.2.1.9 (100%) dihydroxy-acid dehydratase (100%) "GO:0009097 (16.1%) GO:0009099 (16.1%) GO:0008652 (0.5%)" GO:0005829 (16.7%) "GO:0004160 (16.7%) GO:0051537 (16.7%) GO:0000287 (14.5%)" "isoleucine biosynthetic process (16.1%) L-valine biosynthetic process (16.1%) amino acid biosynthetic process (0.5%)" cytosol (16.7%) "dihydroxy-acid dehydratase activity (16.7%) 2 iron, 2 sulfur cluster binding (16.7%) magnesium ion binding (14.5%)" "IPR000581 (16.7%) IPR004404 (16.7%) IPR020558 (16.7%)" "Dihydroxy-acid/6-phosphogluconate dehydratase, N-terminal (16.7%) Dihydroxy-acid dehydratase (16.7%) Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site (16.7%)" WTCDGSPEFTLEEVEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0005737 (15.5%) "GO:0005524 (19.8%) GO:0016887 (19.8%) GO:0051082 (19.8%)" cytoplasm (15.5%) "ATP binding (19.8%) ATP hydrolysis activity (19.8%) unfolded protein binding (19.8%)" "IPR001404 (16.8%) IPR019805 (16.8%) IPR020568 (16.8%)" "Heat shock protein Hsp90 family (16.8%) Heat shock protein Hsp90, conserved site (16.8%) Ribosomal protein uS5 domain 2-type superfamily (16.8%)" QPVNQPLQTGLK Bacteria Bacteria "7.1.2.2 (99.3%) 3.6.3.14 (0.7%)" "H(+)-transporting two-sector ATPase (99.3%) Transferred entry: 7.1.2.2 (0.7%)" GO:0015986 (0.1%) "GO:0045259 (18.8%) GO:0005886 (17.2%)" "GO:0005524 (18.8%) GO:0043531 (18.8%) GO:0046933 (18.8%)" proton motive force-driven ATP synthesis (0.1%) "proton-transporting ATP synthase complex (18.8%) plasma membrane (17.2%)" "ATP binding (18.8%) ADP binding (18.8%) proton-transporting ATP synthase activity, rotational mechanism (18.8%)" "IPR000194 (10.1%) IPR005294 (10.1%) IPR027417 (10.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%) ATP synthase, F1 complex, alpha subunit (10.1%) P-loop containing nucleoside triphosphate hydrolase (10.1%)" MTKADIVNEITK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0030261 (24.2%) GO:0005829 (24.9%) "GO:0003677 (25.7%) GO:0030527 (25.3%)" chromosome condensation (24.2%) cytosol (24.9%) "DNA binding (25.7%) structural constituent of chromatin (25.3%)" "IPR000119 (50%) IPR010992 (50%)" "Histone-like DNA-binding protein (50%) Integration host factor (IHF)-like DNA-binding domain superfamily (50%)" ALATSSLNIFGDHQDVMAAR Bacillota Bacteria Bacillati Bacillota 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0006979 (18.5%) GO:0022900 (18.5%)" "GO:0005506 (18.5%) GO:0051539 (18.5%) GO:0016903 (13%)" "response to oxidative stress (18.5%) electron transport chain (18.5%)" "iron ion binding (18.5%) 4 iron, 4 sulfur cluster binding (18.5%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (13%)" "IPR002869 (8%) IPR002880 (8%) IPR009014 (8%)" "Pyruvate-flavodoxin oxidoreductase, central domain (8%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (8%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (8%)" KLGILAYGNVGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.95 (66.7%) 1.1.1.290 (16.7%) 1.1.1.81 (16.7%)" "phosphoglycerate dehydrogenase (66.7%) 4-phosphoerythronate dehydrogenase (16.7%) hydroxypyruvate reductase (16.7%)" "GO:0051287 (49.2%) GO:0016616 (42.9%) GO:0004617 (3.2%)" "NAD binding (49.2%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (42.9%) phosphoglycerate dehydrogenase activity (3.2%)" "IPR006139 (24.2%) IPR006140 (24.2%) IPR029752 (24.2%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (24.2%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (24.2%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 (24.2%)" QLGEDPWVAIAKR root "GO:0006412 (24.8%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (24.6%) GO:0005840 (0.5%) GO:1990904 (0.2%)" "GO:0003735 (24.8%) GO:0003729 (24.8%) GO:0016491 (0.1%)" "translation (24.8%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.6%) ribosome (0.5%) ribonucleoprotein complex (0.2%)" "structural constituent of ribosome (24.8%) mRNA binding (24.8%) oxidoreductase activity (0.1%)" "IPR003029 (20.1%) IPR012340 (20.1%) IPR050437 (20.1%)" "S1 domain (20.1%) Nucleic acid-binding, OB-fold (20.1%) Small ribosomal subunit protein bS1-like (20.1%)" ATKEPIKNEANNGLK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0006457 (32.1%) GO:0061077 (0.4%)" "GO:0005737 (31.7%) GO:0005829 (0.4%)" "GO:0003755 (34.2%) GO:0016853 (1.2%)" "protein folding (32.1%) obsolete chaperone-mediated protein folding (0.4%)" "cytoplasm (31.7%) cytosol (0.4%)" "peptidyl-prolyl cis-trans isomerase activity (34.2%) isomerase activity (1.2%)" "IPR002130 (20.4%) IPR029000 (20.4%) IPR044665 (20.4%)" "Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain (20.4%) Cyclophilin-like domain superfamily (20.4%) Cyclophilin-type peptidyl-prolyl cis-trans isomerase, E. coli cyclophilin A-like (20.4%)" ANADLDKQPDSVSSVLK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "GO:0045892 (25.1%) GO:0006355 (0.1%)" "GO:0005737 (24.3%) GO:0005829 (0.1%)" "GO:0003677 (25.4%) GO:0003700 (25.1%)" "negative regulation of DNA-templated transcription (25.1%) regulation of DNA-templated transcription (0.1%)" "cytoplasm (24.3%) cytosol (0.1%)" "DNA binding (25.4%) DNA-binding transcription factor activity (25.1%)" "IPR005471 (14.5%) IPR036388 (14.5%) IPR036390 (14.5%)" "Transcription regulator IclR, N-terminal (14.5%) Winged helix-like DNA-binding domain superfamily (14.5%) Winged helix DNA-binding domain superfamily (14.5%)" YLSLNEMYQVANSYPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0016020 (100%) membrane (100%) "IPR011990 (25%) IPR024480 (25%) IPR036737 (25%)" "Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%) OmpA-like domain superfamily (25%)" TVFGELPFKFEAGTPDYIATTGLAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.8.1.7 (100%) cysteine desulfurase (100%) GO:0006534 (32.4%) "GO:0030170 (32.4%) GO:0031071 (32.4%) GO:0008483 (2.8%)" cysteine metabolic process (32.4%) "pyridoxal phosphate binding (32.4%) cysteine desulfurase activity (32.4%) transaminase activity (2.8%)" "IPR000192 (16.7%) IPR010970 (16.7%) IPR015421 (16.7%)" "Aminotransferase class V domain (16.7%) Cysteine desulfurase, SufS (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" TAEDVEAVKEGVDLIFGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006457 (16.7%) GO:0005737 (16.7%) "GO:0000774 (16.7%) GO:0042803 (16.7%) GO:0051082 (16.7%)" protein folding (16.7%) cytoplasm (16.7%) "adenyl-nucleotide exchange factor activity (16.7%) protein homodimerization activity (16.7%) unfolded protein binding (16.7%)" "IPR000740 (33.3%) IPR009012 (33.3%) IPR013805 (33.3%)" "GrpE nucleotide exchange factor (33.3%) GrpE nucleotide exchange factor, head (33.3%) GrpE nucleotide exchange factor, coiled-coil (33.3%)" VLIPIDFSDYSAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR006015 (33.3%) IPR006016 (33.3%) IPR014729 (30.3%)" "Universal stress protein A family (33.3%) UspA (33.3%) Rossmann-like alpha/beta/alpha sandwich fold (30.3%)" QFIVATESGVIHEMRK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.5.1.72 (100%) quinolinate synthase (100%) GO:0034628 (20%) GO:0005829 (20%) "GO:0008987 (20%) GO:0046872 (20%) GO:0051539 (20%)" 'de novo' NAD+ biosynthetic process from L-aspartate (20%) cytosol (20%) "quinolinate synthetase A activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR003473 (33.3%) IPR023066 (33.3%) IPR036094 (33.3%)" "Quinolinate synthetase A (33.3%) Quinolinate synthase A, type 2 (33.3%) Quinolinate synthetase A superfamily (33.3%)" SEQNNTEMTFQIQR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0015031 (20.3%) GO:0051262 (20.3%) GO:0006457 (18.9%)" "GO:0005737 (19.2%) GO:0005829 (0.1%)" "GO:0051082 (20.3%) GO:0015038 (0.1%) GO:0070678 (0.1%)" "protein transport (20.3%) protein tetramerization (20.3%) protein folding (18.9%)" "cytoplasm (19.2%) cytosol (0.1%)" "unfolded protein binding (20.3%) glutathione disulfide oxidoreductase activity (0.1%) preprotein binding (0.1%)" "IPR003708 (49.2%) IPR035958 (49.2%) IPR002109 (0.3%)" "Bacterial protein export chaperone SecB (49.2%) SecB-like superfamily (49.2%) Glutaredoxin (0.3%)" SATNTGSAESQIALFTFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022627 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000589 (33.3%) IPR005290 (33.3%) IPR009068 (33.3%)" "Small ribosomal subunit protein uS15 (33.3%) Small ribosomal subunit protein uS15, bacteria (33.3%) uS15/NS1, RNA-binding domain superfamily (33.3%)" STQVYGQDVWLPAETLDLIR root 1.1.1.42 (100%) isocitrate dehydrogenase (NADP(+)) (100%) "GO:0006099 (21.5%) GO:0006097 (17.7%) GO:0006979 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004450 (21.5%) GO:0000287 (17.5%) GO:0051287 (17.5%)" "tricarboxylic acid cycle (21.5%) glyoxylate cycle (17.7%) response to oxidative stress (0%)" "cytoplasm (0%) cytosol (0%)" "isocitrate dehydrogenase (NADP+) activity (21.5%) magnesium ion binding (17.5%) NAD binding (17.5%)" "IPR004439 (35.5%) IPR024084 (35.5%) IPR019818 (29%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (35.5%) Isopropylmalate dehydrogenase-like domain (35.5%) Isocitrate/isopropylmalate dehydrogenase, conserved site (29%)" FLQDNPGTEVEIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.14.- (100%) Dipeptidyl-peptidases and tripeptidyl-peptidases (100%) "GO:0006508 (25%) GO:0043171 (25%)" "GO:0008239 (25%) GO:0070009 (25%)" "proteolysis (25%) peptide catabolic process (25%)" "dipeptidyl-peptidase activity (25%) serine-type aminopeptidase activity (25%)" "IPR009003 (33.3%) IPR019500 (33.3%) IPR043504 (33.3%)" "Peptidase S1, PA clan (33.3%) Peptidase S46 (33.3%) Peptidase S1, PA clan, chymotrypsin-like fold (33.3%)" LVPFSVVGEWK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004822 (14.3%)" isoleucyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) isoleucine-tRNA ligase activity (14.3%)" "IPR002300 (12.5%) IPR002301 (12.5%) IPR009008 (12.5%)" "Aminoacyl-tRNA synthetase, class Ia (12.5%) Isoleucine-tRNA ligase (12.5%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.5%)" SALLAHPDHIK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (33.3%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (33.3%)" "IPR003741 (12.7%) IPR004452 (12.7%) IPR009051 (12.7%)" "LUD domain (12.7%) L-lactate oxidation iron-sulfur protein LutB/LldF (12.7%) Alpha-helical ferredoxin (12.7%)" SYQAFLSQVETFIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR049273 (50%) IPR053996 (50%)" "DUF3829-like, N-terminal domain (50%) DUF3829-like, C-terminal domain (50%)" IKPGGILIYDGYGIIEPPTRK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0016903 (88.9%) GO:0019164 (11.1%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (88.9%) pyruvate synthase activity (11.1%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" QNIANLPAGNDYSQAAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25.2%) GO:0005829 (25.2%) "GO:0004802 (25.2%) GO:0046872 (24.3%)" pentose-phosphate shunt (25.2%) cytosol (25.2%) "transketolase activity (25.2%) metal ion binding (24.3%)" "IPR009014 (12.8%) IPR033247 (12.8%) IPR055152 (12.8%)" "Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.8%) Transketolase family (12.8%) Transketolase-like, C-terminal domain (12.8%)" EQSHMFITGPDVVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.-.-.- (33.3%) 6.4.1.2 (33.3%) 6.4.1.3 (33.3%)" "Ligases (33.3%) acetyl-CoA carboxylase (33.3%) propionyl-CoA carboxylase (33.3%)" GO:0015977 (21.4%) GO:0009317 (21.4%) "GO:0004658 (25.9%) GO:0003989 (21.8%) GO:0016740 (9.5%)" carbon fixation (21.4%) acetyl-CoA carboxylase complex (21.4%) "propionyl-CoA carboxylase activity (25.9%) acetyl-CoA carboxylase activity (21.8%) transferase activity (9.5%)" "IPR011762 (20.1%) IPR029045 (20.1%) IPR034733 (20.1%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20.1%) ClpP/crotonase-like domain superfamily (20.1%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.1%)" LYKEVGSLQCTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (50%) GO:0004565 (50%) carbohydrate metabolic process (50%) beta-galactosidase activity (50%) "IPR001944 (12.5%) IPR008979 (12.5%) IPR017853 (12.5%)" "Glycoside hydrolase, family 35 (12.5%) Galactose-binding-like domain superfamily (12.5%) Glycoside hydrolase superfamily (12.5%)" MYDFYLKCDEIEQAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae IPR011990 (100%) Tetratricopeptide-like helical domain superfamily (100%) RKEINDLLGISEPCETR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis DAGFRVPDINMK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.1.3.1 (100%) methylmalonyl-CoA carboxytransferase (100%) GO:0006094 (10%) GO:0005737 (10%) "GO:0003824 (60%) GO:0004736 (10%) GO:0047154 (10%)" gluconeogenesis (10%) cytoplasm (10%) "catalytic activity (60%) pyruvate carboxylase activity (10%) methylmalonyl-CoA carboxytransferase activity (10%)" "IPR000891 (25%) IPR003379 (25%) IPR013785 (25%)" "Pyruvate carboxyltransferase (25%) Carboxylase, conserved domain (25%) Aldolase-type TIM barrel (25%)" SIASLLDIIDKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.1.3.1 (100%) alkaline phosphatase (100%) GO:0004035 (100%) alkaline phosphatase activity (100%) "IPR002591 (33.3%) IPR017850 (33.3%) IPR026263 (33.3%)" "Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (33.3%) Alkaline-phosphatase-like, core domain superfamily (33.3%) Alkaline phosphatase, prokaryotic (33.3%)" LEISNTSHPFYTGK Bacteria Bacteria GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR002150 (25.1%) IPR027493 (25.1%) IPR034704 (24.9%)" "Large ribosomal subunit protein bL31 type A/B (25.1%) Large ribosomal subunit protein bL31 type B (25.1%) Large ribosomal subunit protein bL28/bL31-like superfamily (24.9%)" IGMGGLFNVLEVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.103 (50%) 4.2.1.47 (50%)" "L-threonine 3-dehydrogenase (50%) GDP-mannose 4,6-dehydratase (50%)" GO:0006567 (49.5%) "GO:0008743 (49.5%) GO:0016829 (1%)" L-threonine catabolic process (49.5%) "L-threonine 3-dehydrogenase activity (49.5%) lyase activity (1%)" "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" MDLVEQIDDIMKQER Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0016787 (100%) hydrolase activity (100%) "IPR003495 (20%) IPR011629 (20%) IPR027417 (20%)" "CobW/HypB/UreG, nucleotide-binding domain (20%) Zinc chaperone CobW-like, C-terminal (20%) P-loop containing nucleoside triphosphate hydrolase (20%)" TDTDSFLLEGEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.16.1.1 (100%) mercury(II) reductase (100%) "GO:0003955 (30.2%) GO:0016668 (30.2%) GO:0050660 (30.2%)" "NAD(P)H dehydrogenase (quinone) activity (30.2%) oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (30.2%) flavin adenine dinucleotide binding (30.2%)" "IPR001100 (16.7%) IPR004099 (16.7%) IPR012999 (16.7%)" "Pyridine nucleotide-disulphide oxidoreductase, class I (16.7%) Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (16.7%) Pyridine nucleotide-disulphide oxidoreductase, class I, active site (16.7%)" MVDLNCFTVEAAMR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (14.3%) IPR006519 (14.3%) IPR020783 (14.3%)" "Ribosomal protein uL11 (14.3%) Large ribosomal subunit protein uL11, bacteria (14.3%) Large ribosomal subunit protein uL11, C-terminal (14.3%)" YSDHIALPVEIEKR root "GO:0006457 (0.1%) GO:0006974 (0.1%) GO:0009408 (0.1%)" "GO:0005737 (19.8%) GO:0005829 (0.1%) GO:0005886 (0%)" "GO:0005524 (19.9%) GO:0016887 (19.9%) GO:0051082 (19.9%)" "protein folding (0.1%) DNA damage response (0.1%) response to heat (0.1%)" "cytoplasm (19.8%) cytosol (0.1%) plasma membrane (0%)" "ATP binding (19.9%) ATP hydrolysis activity (19.9%) unfolded protein binding (19.9%)" "IPR001404 (14.6%) IPR036890 (14.5%) IPR020575 (14.5%)" "Heat shock protein Hsp90 family (14.6%) Histidine kinase/HSP90-like ATPase superfamily (14.5%) Heat shock protein Hsp90, N-terminal (14.5%)" ENMKEEDQPFMTVSLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0015031 (31%) GO:0005886 (34.5%) GO:0022857 (34.5%) protein transport (31%) plasma membrane (34.5%) transmembrane transporter activity (34.5%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) LAVTEGVNNYGSGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.2.1.177 (100%) alpha-D-xyloside xylohydrolase (100%) GO:0000272 (33.3%) "GO:0030246 (33.3%) GO:0004553 (29.2%) GO:0061634 (4.2%)" polysaccharide catabolic process (33.3%) "carbohydrate binding (33.3%) hydrolase activity, hydrolyzing O-glycosyl compounds (29.2%) alpha-D-xyloside xylohydrolase (4.2%)" "IPR000322 (6%) IPR000421 (6%) IPR002105 (6%)" "Glycoside hydrolase family 31, TIM barrel domain (6%) Coagulation factor 5/8, C-terminal domain (6%) Dockerin type I repeat (6%)" SADELHAYFAEVLPNYDRDR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR041218 (25%) IPR049280 (25%) IPR049281 (25%)" "Domain of unknown function DUF5606 (25%) Domain of unknown function DUF6852 (25%) BVU_3817-like, C-terminal domain superfamily (25%)" NGGIYQEVGPR root TTVPQIFIDAQHIGGCDDLYALDAR root "GO:0034599 (20%) GO:0045454 (19.9%) GO:0009263 (19.8%)" "GO:0005737 (20%) GO:0005829 (0%)" "GO:0015038 (20%) GO:0015035 (0%) GO:0016491 (0%)" "cellular response to oxidative stress (20%) cell redox homeostasis (19.9%) deoxyribonucleotide biosynthetic process (19.8%)" "cytoplasm (20%) cytosol (0%)" "glutathione disulfide oxidoreductase activity (20%) protein-disulfide reductase activity (0%) oxidoreductase activity (0%)" "IPR014025 (20.1%) IPR036249 (20.1%) IPR002109 (20%)" "Glutaredoxin subgroup (20.1%) Thioredoxin-like superfamily (20.1%) Glutaredoxin (20%)" AIEEPLRQIVANAGKEGAVVVQK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.7%) GO:0005737 (15.5%) "GO:0005524 (17.7%) GO:0140662 (17.7%) GO:0016853 (15.9%)" protein refolding (17.7%) cytoplasm (15.5%) "ATP binding (17.7%) ATP-dependent protein folding chaperone (17.7%) isomerase activity (15.9%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR027413 (16.7%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like equatorial domain superfamily (16.7%)" KNPQKNLYTFK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:1990451 (32.4%) GO:0009268 (0.4%) GO:0010447 (0.4%)" "GO:0042597 (33.8%) GO:0030288 (0.4%)" GO:0051082 (32.7%) "cellular stress response to acidic pH (32.4%) response to pH (0.4%) response to acidic pH (0.4%)" "periplasmic space (33.8%) outer membrane-bounded periplasmic space (0.4%)" unfolded protein binding (32.7%) "IPR010486 (33.8%) IPR038303 (33.8%) IPR028623 (32.4%)" "HNS-dependent expression A/B (33.8%) HNS-dependent expression A/B superfamily (33.8%) HNS-dependent expression B (32.4%)" ATGTTTITASSK Parabacteroides merdae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides merdae "IPR003343 (20%) IPR008964 (20%) IPR015943 (20%)" "Bacterial Ig-like domain, group 2 (20%) Invasin/intimin cell-adhesion fragments (20%) WD40/YVTN repeat-like-containing domain superfamily (20%)" LVTITVCTARPGIIIGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20.3%) "GO:0022627 (20.3%) GO:0005840 (0.2%)" "GO:0003735 (20.3%) GO:0019843 (20.3%) GO:0003729 (18.5%)" translation (20.3%) "cytosolic small ribosomal subunit (20.3%) ribosome (0.2%)" "structural constituent of ribosome (20.3%) rRNA binding (20.3%) mRNA binding (18.5%)" "IPR001351 (11.2%) IPR004044 (11.2%) IPR004087 (11.2%)" "Small ribosomal subunit protein uS3, C-terminal (11.2%) K Homology domain, type 2 (11.2%) K Homology domain (11.2%)" EIMDAANNTGASVK root "GO:0006412 (19.9%) GO:0000028 (0%)" "GO:0015935 (19.9%) GO:0005840 (0.3%) GO:1990904 (0.1%)" "GO:0003735 (19.9%) GO:0019843 (19.9%) GO:0000049 (19.8%)" "translation (19.9%) ribosomal small subunit assembly (0%)" "small ribosomal subunit (19.9%) ribosome (0.3%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (19.9%) rRNA binding (19.9%) tRNA binding (19.8%)" "IPR023798 (20.2%) IPR036823 (20.2%) IPR005717 (20.1%)" "Small ribosomal subunit protein uS7 domain (20.2%) Small ribosomal subunit protein uS7 domain superfamily (20.2%) Small ribosomal subunit protein uS7, bacteria/organella (20.1%)" NVLGYTDANSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (11.6%) GO:0044210 (11.6%)" "GO:0005829 (11.6%) GO:0097268 (11.6%)" "GO:0003883 (11.6%) GO:0005524 (11.6%) GO:0042802 (11.6%)" "pyrimidine nucleobase biosynthetic process (11.6%) 'de novo' CTP biosynthetic process (11.6%)" "cytosol (11.6%) cytoophidium (11.6%)" "CTP synthase activity (11.6%) ATP binding (11.6%) identical protein binding (11.6%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" MLQEAVDSLFDNSKR Pseudomonadati Bacteria Pseudomonadati 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0000287 (16.7%) GO:0003677 (16.7%) GO:0003899 (16.7%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "magnesium ion binding (16.7%) DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" FVQMYGDVVLGMKPVNKEDIDPFEAIIEEVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10%) IPR002192 (10%) IPR008279 (10%)" "PEP-utilising enzyme, C-terminal (10%) Pyruvate phosphate dikinase, AMP/ATP-binding (10%) PEP-utilising enzyme, mobile domain (10%)" VIWGGSDICPFK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (32.4%) "GO:0004476 (32.4%) GO:0008270 (32.4%) GO:0016853 (2.7%)" carbohydrate metabolic process (32.4%) "mannose-6-phosphate isomerase activity (32.4%) zinc ion binding (32.4%) isomerase activity (2.7%)" "IPR011051 (18.3%) IPR014710 (18.3%) IPR014628 (16.9%)" "RmlC-like cupin domain superfamily (18.3%) RmlC-like jelly roll fold (18.3%) Mannose-6-phosphate isomerase, Firmicutes type, short form (16.9%)" VVCVSGSGNVAQYTVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006537 (26.3%) GO:0005829 (23.7%) "GO:0004354 (26.3%) GO:0000166 (23.7%)" glutamate biosynthetic process (26.3%) cytosol (23.7%) "glutamate dehydrogenase (NADP+) activity (26.3%) nucleotide binding (23.7%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" FFEQDSLTEDEMR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.6.-.- (100%) Acting on acid anhydrides (100%) GO:0032790 (25%) "GO:0003746 (25.4%) GO:0005525 (25%) GO:0003924 (24.3%)" ribosome disassembly (25%) "translation elongation factor activity (25.4%) GTP binding (25%) GTPase activity (24.3%)" "IPR027417 (7.8%) IPR009000 (7.6%) IPR035647 (7.6%)" "P-loop containing nucleoside triphosphate hydrolase (7.8%) Translation protein, beta-barrel domain superfamily (7.6%) EF-G domain III/V-like (7.6%)" EAEKHGLTFVHHQEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.1.1.- (100%) Methyltransferases (100%) GO:0032259 (29.8%) "GO:0005737 (29.8%) GO:0005840 (10.6%)" "GO:0016279 (21.3%) GO:0008276 (8.5%)" methylation (29.8%) "cytoplasm (29.8%) ribosome (10.6%)" "protein-lysine N-methyltransferase activity (21.3%) protein methyltransferase activity (8.5%)" "IPR004498 (33.3%) IPR029063 (33.3%) IPR050078 (33.3%)" "Ribosomal protein L11 methyltransferase (33.3%) S-adenosyl-L-methionine-dependent methyltransferase superfamily (33.3%) Ribosomal protein L11 methyltransferase PrmA (33.3%)" ALSPNHPVTR Bacteria Bacteria "1.2.7.1 (88.1%) 1.2.7.- (11.9%)" "pyruvate synthase (88.1%) With an iron-sulfur protein as acceptor (11.9%)" "GO:0006979 (16.8%) GO:0022900 (16.5%)" "GO:0051539 (16.8%) GO:0005506 (16.5%) GO:0030976 (15.4%)" "response to oxidative stress (16.8%) electron transport chain (16.5%)" "4 iron, 4 sulfur cluster binding (16.8%) iron ion binding (16.5%) thiamine pyrophosphate binding (15.4%)" "IPR002880 (7.8%) IPR009014 (7.8%) IPR029061 (7.8%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.8%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.8%) Thiamin diphosphate-binding fold (7.8%)" IHINEDNDLVISMEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" SAAEQVAYLEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (16.7%) IPR020809 (16.7%) IPR020810 (16.7%)" "Enolase (16.7%) Enolase, conserved site (16.7%) Enolase, C-terminal TIM barrel domain (16.7%)" NTTIIIPEHNIPSFKPAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0030261 (24.2%) GO:0005829 (25.3%) "GO:0003677 (25.3%) GO:0030527 (25.3%)" chromosome condensation (24.2%) cytosol (25.3%) "DNA binding (25.3%) structural constituent of chromatin (25.3%)" "IPR000119 (50%) IPR010992 (50%)" "Histone-like DNA-binding protein (50%) Integration host factor (IHF)-like DNA-binding domain superfamily (50%)" EYCHEVNDDELRKDVHDK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (8.3%) IPR003029 (8.3%) IPR004087 (8.3%)" "Exoribonuclease, phosphorolytic domain 1 (8.3%) S1 domain (8.3%) K Homology domain (8.3%)" VGEDGPTHEPVEQEAQVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.2.1.1 (95.5%) 2.2.1.- (4.5%)" "transketolase (95.5%) Transketolases and transaldolases (4.5%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" QEIGQIVGCSR root "GO:0045893 (16.4%) GO:0045892 (0%) GO:0006351 (0%)" "GO:0005829 (16.7%) GO:0032993 (16.4%)" "GO:0003700 (16.8%) GO:0030552 (16.6%) GO:0043565 (16.4%)" "positive regulation of DNA-templated transcription (16.4%) negative regulation of DNA-templated transcription (0%) DNA-templated transcription (0%)" "cytosol (16.7%) protein-DNA complex (16.4%)" "DNA-binding transcription factor activity (16.8%) cAMP binding (16.6%) sequence-specific DNA binding (16.4%)" "IPR012318 (11.2%) IPR036388 (11.2%) IPR036390 (11.2%)" "Crp-type HTH domain (11.2%) Winged helix-like DNA-binding domain superfamily (11.2%) Winged helix DNA-binding domain superfamily (11.2%)" TGKGNLLELAVEAAHVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (19.3%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (19.3%)" "IPR006098 (16.9%) IPR006099 (16.9%) IPR016176 (16.9%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.9%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.9%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (16.9%)" LTPSTPGQMVFAEYLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.4.11.4 (95.2%) 3.4.11.- (4.8%)" "tripeptide aminopeptidase (95.2%) Aminopeptidases (4.8%)" "GO:0006508 (16.7%) GO:0043171 (16.7%)" GO:0005829 (16.7%) "GO:0008237 (16.7%) GO:0008270 (16.7%) GO:0045148 (16.7%)" "proteolysis (16.7%) peptide catabolic process (16.7%)" cytosol (16.7%) "metallopeptidase activity (16.7%) zinc ion binding (16.7%) tripeptide aminopeptidase activity (16.7%)" "IPR001261 (20%) IPR002933 (20%) IPR010161 (20%)" "ArgE/DapE/ACY1/CPG2/YscS, conserved site (20%) Peptidase M20 (20%) Peptidase M20B, tripeptide aminopeptidase (20%)" DNIVFHCIVFPSMLK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.10 (100%) methionine--tRNA ligase (100%) GO:0006431 (16.8%) GO:0005829 (16.8%) "GO:0004825 (17.1%) GO:0005524 (17.1%) GO:0000049 (16.1%)" methionyl-tRNA aminoacylation (16.8%) cytosol (16.8%) "methionine-tRNA ligase activity (17.1%) ATP binding (17.1%) tRNA binding (16.1%)" "IPR014729 (8.6%) IPR015413 (8.6%) IPR023458 (8.6%)" "Rossmann-like alpha/beta/alpha sandwich fold (8.6%) Methionyl/Leucyl tRNA synthetase (8.6%) Methionine-tRNA ligase, type 1 (8.6%)" QISVVVGYDCR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.4.2.2 (60%) 5.4.2.- (40%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (60%) Phosphotransferases (phosphomutases) (40%)" "GO:0005975 (24.5%) GO:0006166 (24.5%)" "GO:0000287 (24.5%) GO:0008973 (24.5%) GO:0004614 (2.1%)" "carbohydrate metabolic process (24.5%) purine ribonucleoside salvage (24.5%)" "magnesium ion binding (24.5%) phosphopentomutase activity (24.5%) phosphoglucomutase activity (2.1%)" "IPR005844 (13.2%) IPR016055 (13.2%) IPR016066 (13.2%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (13.2%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (13.2%) Alpha-D-phosphohexomutase, conserved site (13.2%)" GANFDAYAGQDIVSNASCTTNCLAPLAK Bacteria Bacteria "1.2.1.- (50%) 1.2.1.12 (50%)" "With NAD(+) or NADP(+) as acceptor (50%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (50%)" "GO:0072524 (15.2%) GO:0006006 (10.7%) GO:0006096 (1.8%)" GO:0005737 (1.8%) "GO:0051287 (26.8%) GO:0004365 (17.9%) GO:0016620 (15.2%)" "pyridine-containing compound metabolic process (15.2%) glucose metabolic process (10.7%) glycolytic process (1.8%)" cytoplasm (1.8%) "NAD binding (26.8%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (17.9%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (15.2%)" "IPR020829 (20.1%) IPR020830 (20.1%) IPR020831 (20.1%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (20.1%) Glyceraldehyde 3-phosphate dehydrogenase, active site (20.1%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (20.1%)" GQVLAAPGSVTPHTK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (19.9%) "GO:0003746 (19.9%) GO:0003924 (19.9%) GO:0005525 (19.9%)" cytosol (19.9%) "translation elongation factor activity (19.9%) GTPase activity (19.9%) GTP binding (19.9%)" "IPR000795 (9.9%) IPR004161 (9.9%) IPR009000 (9.9%)" "Translational (tr)-type GTP-binding domain (9.9%) Translation elongation factor EFTu-like, domain 2 (9.9%) Translation protein, beta-barrel domain superfamily (9.9%)" GVIINGGPNHVIDGVDIDVLPEIYK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%)" cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%)" "IPR001674 (16.7%) IPR014729 (16.7%) IPR017926 (16.7%)" "GMP synthase, C-terminal (16.7%) Rossmann-like alpha/beta/alpha sandwich fold (16.7%) Glutamine amidotransferase (16.7%)" TRYSDAELEEFR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006355 (0.6%) GO:0008270 (99.4%) regulation of DNA-templated transcription (0.6%) zinc ion binding (99.4%) "IPR000962 (54.3%) IPR037187 (45.7%)" "Zinc finger, DksA/TraR C4-type (54.3%) DksA, N-terminal domain superfamily (45.7%)" AELADELYDKILNIVVVQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0003700 (50%) GO:0043565 (50%)" "DNA-binding transcription factor activity (50%) sequence-specific DNA binding (50%)" "IPR018060 (51.6%) IPR009057 (48.4%)" "AraC-like, DNA binding HTH domain (51.6%) Homedomain-like superfamily (48.4%)" THHTFSFANYYNPSR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.13.11.24 (100%) quercetin 2,3-dioxygenase (100%) "GO:0046872 (83.3%) GO:0008127 (16.7%)" "metal ion binding (83.3%) quercetin 2,3-dioxygenase activity (16.7%)" "IPR003829 (20%) IPR011051 (20%) IPR012093 (20%)" "Pirin, N-terminal domain (20%) RmlC-like cupin domain superfamily (20%) Pirin (20%)" SNRPSDFIDALITLQK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.1 (66.7%) 1.1.1.202 (33.3%)" "alcohol dehydrogenase (66.7%) 1,3-propanediol dehydrogenase (33.3%)" "GO:0004022 (48.3%) GO:0046872 (48.3%) GO:0047516 (3.4%)" "alcohol dehydrogenase (NAD+) activity (48.3%) metal ion binding (48.3%) 1,3-propanediol dehydrogenase activity (3.4%)" "IPR001670 (33.3%) IPR039697 (33.3%) IPR056798 (33.3%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (33.3%) Iron-type alcohol dehydrogenase-like (33.3%) Fe-containing alcohol dehydrogenase-like, C-terminal (33.3%)" ECNVSGAAIHQR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0043200 (21.7%) GO:0006355 (2.8%)" GO:0005829 (21.7%) GO:0043565 (53.8%) "response to amino acid (21.7%) regulation of DNA-templated transcription (2.8%)" cytosol (21.7%) sequence-specific DNA binding (53.8%) "IPR000485 (15%) IPR011008 (15%) IPR019887 (15%)" "AsnC-type HTH domain (15%) Dimeric alpha-beta barrel (15%) Transcription regulator AsnC/Lrp, ligand binding domain (15%)" SDSHLWIMPFPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (37%) IPR033985 (34.8%) IPR019734 (26.1%)" "Tetratricopeptide-like helical domain superfamily (37%) SusD-like, N-terminal (34.8%) Tetratricopeptide repeat (26.1%)" HFEALTHALEAIHR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.6.-.- (100%) Acting on acid anhydrides (100%) "GO:0002098 (14.4%) GO:0030488 (14.4%)" GO:0005829 (14.4%) "GO:0003924 (14.4%) GO:0005525 (14.4%) GO:0046872 (14.4%)" "tRNA wobble uridine modification (14.4%) tRNA methylation (14.4%)" cytosol (14.4%) "GTPase activity (14.4%) GTP binding (14.4%) metal ion binding (14.4%)" "IPR004520 (11.3%) IPR005225 (11.3%) IPR006073 (11.3%)" "tRNA modification GTPase MnmE (11.3%) Small GTP-binding domain (11.3%) GTP binding domain (11.3%)" VAVLDADITGPSIPR Eubacteriales Bacteria Bacillati Bacillota Clostridia Eubacteriales GO:0016226 (16.7%) "GO:0005524 (16.7%) GO:0016887 (16.7%) GO:0046872 (16.7%)" iron-sulfur cluster assembly (16.7%) "ATP binding (16.7%) ATP hydrolysis activity (16.7%) metal ion binding (16.7%)" "IPR019591 (25%) IPR027417 (25%) IPR033756 (25%)" "Mrp/NBP35 ATP-binding protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%) Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 (25%)" MEEQHYQLLDGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.5.1.5 (50%) 3.5.4.9 (50%)" "methylenetetrahydrofolate dehydrogenase (NADP(+)) (50%) methenyltetrahydrofolate cyclohydrolase (50%)" "GO:0000105 (14.3%) GO:0006164 (14.3%) GO:0009086 (14.3%)" GO:0005829 (14.3%) "GO:0004477 (14.3%) GO:0004488 (14.3%)" "L-histidine biosynthetic process (14.3%) purine nucleotide biosynthetic process (14.3%) methionine biosynthetic process (14.3%)" cytosol (14.3%) "methenyltetrahydrofolate cyclohydrolase activity (14.3%) methylenetetrahydrofolate dehydrogenase (NADP+) activity (14.3%)" "IPR000672 (16.7%) IPR020630 (16.7%) IPR020631 (16.7%)" "Tetrahydrofolate dehydrogenase/cyclohydrolase (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (16.7%) Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (16.7%)" EGLTAMANAAFR Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (19.8%) GO:0005829 (0.1%) "GO:0046872 (20.1%) GO:0051539 (20.1%) GO:0004333 (19.8%)" tricarboxylic acid cycle (19.8%) cytosol (0.1%) "metal ion binding (20.1%) 4 iron, 4 sulfur cluster binding (20.1%) fumarate hydratase activity (19.8%)" "IPR004646 (16.8%) IPR051208 (16.8%) IPR004647 (16.6%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.8%) Class-I Fumarase/Tartrate Dehydratase (16.8%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.6%)" TMETICGPATPFAENPAAVYAATRNELYKDGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.1%) GO:0006096 (14.1%) GO:0051156 (14.1%)" GO:0005829 (14.1%) "GO:0004347 (14.1%) GO:0048029 (14.1%) GO:0097367 (14.1%)" "gluconeogenesis (14.1%) glycolytic process (14.1%) glucose 6-phosphate metabolic process (14.1%)" cytosol (14.1%) "glucose-6-phosphate isomerase activity (14.1%) monosaccharide binding (14.1%) carbohydrate derivative binding (14.1%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" IRPTAEELANYGEPDFVCFNASK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17%) GO:0005829 (17%) "GO:0004612 (17%) GO:0005524 (17%) GO:0046872 (17%)" gluconeogenesis (17%) cytosol (17%) "phosphoenolpyruvate carboxykinase (ATP) activity (17%) ATP binding (17%) metal ion binding (17%)" "IPR001272 (25.2%) IPR008210 (25.2%) IPR013035 (24.8%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.2%) Phosphoenolpyruvate carboxykinase, N-terminal (25.2%) Phosphoenolpyruvate carboxykinase, C-terminal (24.8%)" GTMVAPDGTVSGTSECAENEFPVNSIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.17.1.8 (100%) 4-hydroxy-tetrahydrodipicolinate reductase (100%) "GO:0009089 (25%) GO:0019877 (25%)" GO:0005829 (25%) GO:0008839 (25%) "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" cytosol (25%) 4-hydroxy-tetrahydrodipicolinate reductase (25%) "IPR000846 (25%) IPR022663 (25%) IPR023940 (25%)" "Dihydrodipicolinate reductase, N-terminal (25%) Dihydrodipicolinate reductase, C-terminal (25%) Dihydrodipicolinate reductase (25%)" AGDIEKVWANPDYANNELGWK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR005886 (33.3%) IPR036291 (33.3%) IPR001509 (28.9%)" "UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD-dependent epimerase/dehydratase (28.9%)" LNGANNEEVVEETKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0034605 (20%) GO:0042026 (20%)" GO:0005737 (20%) "GO:0005524 (20%) GO:0016887 (20%)" "cellular response to heat (20%) protein refolding (20%)" cytoplasm (20%) "ATP binding (20%) ATP hydrolysis activity (20%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" NHGHIINIGSTAGSWPYAGGNVYGATK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "1.1.1.298 (50%) 1.1.1.381 (50%)" "3-hydroxypropionate dehydrogenase (NADP(+)) (50%) 3-hydroxy acid dehydrogenase (50%)" "GO:0006212 (0.5%) GO:0051289 (0.5%)" "GO:0005829 (47.3%) GO:0032991 (0.5%)" "GO:0016616 (27.7%) GO:0035527 (19.5%) GO:0031132 (2.3%)" "uracil catabolic process (0.5%) protein homotetramerization (0.5%)" "cytosol (47.3%) protein-containing complex (0.5%)" "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (27.7%) 3-hydroxypropionate dehydrogenase (NADP+) activity (19.5%) serine 3-dehydrogenase activity (2.3%)" "IPR002347 (33.3%) IPR020904 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Short-chain dehydrogenase/reductase, conserved site (33.3%) NAD(P)-binding domain superfamily (33.3%)" QSIAKEDALKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (17.1%) GO:0005737 (16.3%) "GO:0004829 (17.1%) GO:0005524 (17.1%) GO:0000049 (16.3%)" threonyl-tRNA aminoacylation (17.1%) cytoplasm (16.3%) "threonine-tRNA ligase activity (17.1%) ATP binding (17.1%) tRNA binding (16.3%)" "IPR012947 (8.1%) IPR018163 (8.1%) IPR045864 (8.1%)" "Threonyl/alanyl tRNA synthetase, SAD (8.1%) Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily (8.1%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (8.1%)" GTNYAILSDILGDEDHLGDMDFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0000287 (14.3%) GO:0003723 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) magnesium ion binding (14.3%) RNA binding (14.3%)" "IPR001247 (8%) IPR003029 (8%) IPR004087 (8%)" "Exoribonuclease, phosphorolytic domain 1 (8%) S1 domain (8%) K Homology domain (8%)" FIASTGYDPEFGARPVKR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0034605 (20%) GO:0042026 (20%)" GO:0005737 (20%) "GO:0005524 (20%) GO:0016887 (20%)" "cellular response to heat (20%) protein refolding (20%)" cytoplasm (20%) "ATP binding (20%) ATP hydrolysis activity (20%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" NLLDLSPEDR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003439 (25%) IPR003593 (25%) IPR010230 (25%)" "ABC transporter-like, ATP-binding domain (25%) AAA+ ATPase domain (25%) FeS cluster assembly SUF system, ATPase SufC (25%)" ALTEAEGDVAR Bacillati Bacteria Bacillati GO:0005737 (49.6%) GO:0003746 (50.4%) cytoplasm (49.6%) translation elongation factor activity (50.4%) "IPR001816 (20.1%) IPR018101 (20.1%) IPR009060 (19.9%)" "Translation elongation factor EFTs/EF1B (20.1%) Translation elongation factor Ts, conserved site (20.1%) UBA-like superfamily (19.9%)" ATVQVAFNTPYPGPNGIGGVTVDGTTSDVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR025347 (100%) Protein of unknown function DUF4251 (100%) TLNSGQMVAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0046872 (100%) metal ion binding (100%) IPR049279 (100%) DUF3108-like (100%) DGTGSAASSIGEVR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR053994 (100%) NigD-like, OB domain (100%) QATKEAGQIAGLEVKR Pseudomonadati Bacteria Pseudomonadati "GO:0042026 (0.1%) GO:0051085 (0.1%)" GO:0005737 (6.6%) "GO:0005524 (30.9%) GO:0051082 (30.9%) GO:0140662 (30.9%)" "protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" cytoplasm (6.6%) "ATP binding (30.9%) unfolded protein binding (30.9%) ATP-dependent protein folding chaperone (30.9%)" "IPR012725 (16.7%) IPR013126 (16.7%) IPR018181 (16.7%)" "Chaperone DnaK (16.7%) Heat shock protein 70 family (16.7%) Heat shock protein 70, conserved site (16.7%)" DDIASFLPVYLEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.7.9.1 (99.6%) 2.7.-.- (0.4%)" "pyruvate, phosphate dikinase (99.6%) Transferring phosphorus-containing groups (0.4%)" "GO:0050242 (25.5%) GO:0016301 (25.4%) GO:0046872 (24.6%)" "pyruvate, phosphate dikinase activity (25.5%) kinase activity (25.4%) metal ion binding (24.6%)" "IPR000121 (10.2%) IPR010121 (10.2%) IPR023151 (10.2%)" "PEP-utilising enzyme, C-terminal (10.2%) Pyruvate, phosphate dikinase (10.2%) PEP-utilising enzyme, conserved site (10.2%)" EVLLNAGMWPFIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (20%) IPR011053 (20%) IPR022615 (20%)" "Na(+)-translocating NADH-quinone reductase subunit A (20%) Single hybrid motif (20%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (20%)" LVQGGGVSLNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) "GO:0006437 (16.4%) GO:0043039 (0.4%) GO:0006418 (0.1%)" GO:0005829 (16.7%) "GO:0003723 (16.9%) GO:0004831 (16.7%) GO:0005524 (16.5%)" "tyrosyl-tRNA aminoacylation (16.4%) tRNA aminoacylation (0.4%) tRNA aminoacylation for protein translation (0.1%)" cytosol (16.7%) "RNA binding (16.9%) tyrosine-tRNA ligase activity (16.7%) ATP binding (16.5%)" "IPR036986 (12.7%) IPR054608 (12.7%) IPR024088 (12.7%)" "RNA-binding S4 domain superfamily (12.7%) Tyrosine--tRNA ligase SYY-like, C-terminal domain (12.7%) Tyrosine-tRNA ligase, bacterial-type (12.7%)" QIEEQLACFVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" HKIINVLGSDNK Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.3%) GO:0030388 (24.3%) GO:0005975 (1%)" "GO:0008270 (25.2%) GO:0004332 (24.3%) GO:0016832 (1%)" "glycolytic process (24.3%) fructose 1,6-bisphosphate metabolic process (24.3%) carbohydrate metabolic process (1%)" "zinc ion binding (25.2%) fructose-bisphosphate aldolase activity (24.3%) aldehyde-lyase activity (1%)" "IPR000771 (25.2%) IPR013785 (25.2%) IPR050246 (25.2%)" "Fructose-bisphosphate aldolase, class-II (25.2%) Aldolase-type TIM barrel (25.2%) Class II Fructose-bisphosphate Aldolase (25.2%)" KLWEIVKDTLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0034599 (33.3%) GO:0005737 (33.3%) GO:0016491 (33.3%) cellular response to oxidative stress (33.3%) cytoplasm (33.3%) oxidoreductase activity (33.3%) "IPR000415 (33.3%) IPR029479 (33.3%) IPR033877 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase Frm2/Hbn1-like (33.3%)" TKLLISELKDADAAVLGASALGWEVRE Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (71.4%) GO:0004340 (28.6%)" "kinase activity (71.4%) glucokinase activity (28.6%)" "IPR000600 (34%) IPR049874 (34%) IPR043129 (31.9%)" "ROK family (34%) ROK, conserved site (34%) ATPase, nucleotide binding domain (31.9%)" YGIPVLEDAAEALGSELNGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0000271 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" polysaccharide biosynthetic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000653 (25%) IPR015421 (25%) IPR015422 (25%)" "DegT/DnrJ/EryC1/StrS aminotransferase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%) Pyridoxal phosphate-dependent transferase, small domain (25%)" TYHKESDELIAKK root 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%) GO:0019563 (16.6%)" "GO:0005829 (16.6%) GO:0016020 (0%)" "GO:0004807 (16.6%) GO:0016853 (0.2%) GO:0042802 (0%)" "gluconeogenesis (16.6%) glycolytic process (16.6%) glycerol catabolic process (16.6%)" "cytosol (16.6%) membrane (0%)" "triose-phosphate isomerase activity (16.6%) isomerase activity (0.2%) identical protein binding (0%)" "IPR000652 (20.3%) IPR013785 (20.3%) IPR035990 (20.3%)" "Triosephosphate isomerase (20.3%) Aldolase-type TIM barrel (20.3%) Triosephosphate isomerase superfamily (20.3%)" HKFSAMLDSLGIDQPR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (13.6%) GO:0006526 (13.6%) GO:0006541 (13.6%)" GO:0005737 (13.6%) "GO:0004088 (13.6%) GO:0005524 (13.6%) GO:0046872 (13.6%)" "pyrimidine nucleotide biosynthetic process (13.6%) L-arginine biosynthetic process (13.6%) glutamine metabolic process (13.6%)" cytoplasm (13.6%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.6%) ATP binding (13.6%) metal ion binding (13.6%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" ILPTIEDVYAIAEMIIK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.4.1.1 (100%) alanine dehydrogenase (100%) GO:0042853 (25.3%) GO:0005886 (25.3%) "GO:0000286 (25.3%) GO:0000166 (23%) GO:0046872 (1.1%)" L-alanine catabolic process (25.3%) plasma membrane (25.3%) "alanine dehydrogenase activity (25.3%) nucleotide binding (23%) metal ion binding (1.1%)" "IPR007698 (19.6%) IPR007886 (19.6%) IPR008141 (19.6%)" "Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain (19.6%) Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal (19.6%) Alanine dehydrogenase (19.6%)" SEFMTMTSGTGLLYSTFSHYDDVRPGEVGQR root 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0009409 (8.9%) GO:0010467 (8.7%) GO:0000027 (8.4%)" "GO:0005829 (9.3%) GO:1990904 (9.3%)" "GO:0005525 (9.3%) GO:0003924 (9.3%) GO:0097216 (9.1%)" "response to cold (8.9%) gene expression (8.7%) ribosomal large subunit assembly (8.4%)" "cytosol (9.3%) ribonucleoprotein complex (9.3%)" "GTP binding (9.3%) GTPase activity (9.3%) guanosine tetraphosphate binding (9.1%)" "IPR035647 (7.1%) IPR000640 (7%) IPR035651 (7%)" "EF-G domain III/V-like (7.1%) Elongation factor EFG, domain V-like (7%) BipA, domain V (7%)" HKDAEMNQELFDKVFGENVVTSEEEFKNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" HQHALDKELELTGGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) "GO:0005737 (20%) GO:0016020 (1%)" "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (19%)" glycogen biosynthetic process (20%) "cytoplasm (20%) membrane (1%)" "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (19%)" "IPR004193 (12.7%) IPR006047 (12.7%) IPR013783 (12.7%)" "Glycoside hydrolase, family 13, N-terminal (12.7%) Glycosyl hydrolase family 13, catalytic domain (12.7%) Immunoglobulin-like fold (12.7%)" HKAPTDLSLMVLGNMVTNLINTSIAPAQR Bacteria Bacteria GO:0005829 (100%) cytosol (100%) "IPR009857 (50%) IPR023202 (50%)" "Uncharacterised protein family UPF0352 (50%) YejL-like superfamily (50%)" YKPNFTPHVDCGDNVIIINADK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0006412 (19.9%) GO:0017148 (19.9%)" "GO:0022625 (19.9%) GO:0005840 (0.3%)" "GO:0003729 (19.9%) GO:0003735 (19.9%)" "translation (19.9%) negative regulation of translation (19.9%)" "cytosolic large ribosomal subunit (19.9%) ribosome (0.3%)" "mRNA binding (19.9%) structural constituent of ribosome (19.9%)" "IPR005822 (25.3%) IPR005823 (25.3%) IPR036899 (25.3%)" "Large ribosomal subunit protein uL13 (25.3%) Large ribosomal subunit protein uL13, bacteria (25.3%) Large ribosomal subunit protein uL13 superfamily (25.3%)" FNQIGSLTETLAAIK root "4.2.1.11 (99.9%) 6.3.4.2 (0.1%)" "phosphopyruvate hydratase (99.9%) CTP synthase (glutamine hydrolyzing) (0.1%)" "GO:0006096 (16.7%) GO:0019856 (0%) GO:0044210 (0%)" "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.2%)" "glycolytic process (16.7%) pyrimidine nucleobase biosynthetic process (0%) 'de novo' CTP biosynthetic process (0%)" "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.2%)" "IPR000941 (16.8%) IPR020809 (16.8%) IPR020810 (16.8%)" "Enolase (16.8%) Enolase, conserved site (16.8%) Enolase, C-terminal TIM barrel domain (16.8%)" YLHDGDIITFGNTTLEAIHVPGHSPGSLVYYCR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "3.-.-.- (50%) 3.1.2.6 (50%)" "Hydrolases (50%) hydroxyacylglutathione hydrolase (50%)" "GO:0016787 (50%) GO:0046872 (50%)" "hydrolase activity (50%) metal ion binding (50%)" "IPR001279 (33.3%) IPR036866 (33.3%) IPR051453 (33.3%)" "Metallo-beta-lactamase (33.3%) Ribonuclease Z/Hydroxyacylglutathione hydrolase-like (33.3%) Metallo-Beta-Lactamase Glyoxalase II (33.3%)" KAVIEMGGGEAAIEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0015977 (23.1%) GO:0009317 (23.1%) "GO:0003989 (23.1%) GO:0004658 (23.1%) GO:0016740 (3.8%)" carbon fixation (23.1%) acetyl-CoA carboxylase complex (23.1%) "acetyl-CoA carboxylase activity (23.1%) propionyl-CoA carboxylase activity (23.1%) transferase activity (3.8%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" IAVLTHWVADNIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR002931 (33.3%) IPR024618 (33.3%) IPR038765 (33.3%)" "Transglutaminase-like (33.3%) Domain of unknown function DUF3857 (33.3%) Papain-like cysteine peptidase superfamily (33.3%)" QTFAEKPAEFDPRK Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.7%) GO:0030388 (24.7%)" GO:0016020 (1.2%) "GO:0004332 (24.7%) GO:0008270 (24.7%)" "glycolytic process (24.7%) fructose 1,6-bisphosphate metabolic process (24.7%)" membrane (1.2%) "fructose-bisphosphate aldolase activity (24.7%) zinc ion binding (24.7%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" RTQANTSVIFVPAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.2.1.5 (94.4%) 6.2.1.- (5.6%)" "succinate--CoA ligase (ADP-forming) (94.4%) Acid--thiol ligases (5.6%)" GO:0006099 (20%) GO:0009361 (20%) "GO:0000166 (20%) GO:0004775 (20%) GO:0004776 (20%)" tricarboxylic acid cycle (20%) succinate-CoA ligase complex (ADP-forming) (20%) "nucleotide binding (20%) succinate-CoA ligase (ADP-forming) activity (20%) succinate-CoA ligase (GDP-forming) activity (20%)" "IPR003781 (14.3%) IPR005810 (14.3%) IPR005811 (14.3%)" "CoA-binding (14.3%) Succinyl-CoA ligase, alpha subunit (14.3%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.3%)" ENLMQVYQQAR root "GO:0046677 (19.4%) GO:0009410 (0%) GO:0009636 (0%)" "GO:1990281 (20.1%) GO:0009279 (20%) GO:0016020 (0%)" "GO:0015288 (20.1%) GO:0015562 (20.1%) GO:0005216 (0%)" "response to antibiotic (19.4%) response to xenobiotic stimulus (0%) response to toxic substance (0%)" "efflux pump complex (20.1%) cell outer membrane (20%) membrane (0%)" "porin activity (20.1%) efflux transmembrane transporter activity (20.1%) monoatomic ion channel activity (0%)" "IPR003423 (33.5%) IPR051906 (33.5%) IPR010130 (32.9%)" "Outer membrane efflux protein (33.5%) Outer membrane protein TolC-like (33.5%) Type I secretion outer membrane protein, TolC (32.9%)" VDNYKELGLNSETATVFNLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.4%) GO:0005829 (17.4%) "GO:0004612 (17.4%) GO:0005524 (17.4%) GO:0046872 (17.1%)" gluconeogenesis (17.4%) cytosol (17.4%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.4%) ATP binding (17.4%) metal ion binding (17.1%)" "IPR001272 (25.1%) IPR008210 (25.1%) IPR013035 (24.9%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.1%) Phosphoenolpyruvate carboxykinase, N-terminal (25.1%) Phosphoenolpyruvate carboxykinase, C-terminal (24.9%)" EGDLTLAQITESAIDFLTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (50.6%) GO:0046872 (49.4%)" "alkaline phosphatase activity (50.6%) metal ion binding (49.4%)" "IPR001952 (33.6%) IPR017850 (33.6%) IPR018299 (32.8%)" "Alkaline phosphatase (33.6%) Alkaline-phosphatase-like, core domain superfamily (33.6%) Alkaline phosphatase, active site (32.8%)" DCFENLCEAGVIDPAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" YLTGFEVLNPELVICHLDSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.6%) "GO:0000428 (16.8%) GO:0005737 (16.6%)" "GO:0003899 (16.6%) GO:0046983 (16.6%) GO:0003677 (16.5%)" DNA-templated transcription (16.6%) "DNA-directed RNA polymerase complex (16.8%) cytoplasm (16.6%)" "DNA-directed RNA polymerase activity (16.6%) protein dimerization activity (16.6%) DNA binding (16.5%)" "IPR011262 (16.8%) IPR011263 (16.8%) IPR011773 (16.6%)" "DNA-directed RNA polymerase, insert domain (16.8%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (16.8%) DNA-directed RNA polymerase, alpha subunit (16.6%)" AVQAIVEKFFGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0005737 (22.4%) GO:0070013 (3.4%)" "GO:0005524 (25%) GO:0140662 (25%) GO:0051082 (24.1%)" "cytoplasm (22.4%) intracellular organelle lumen (3.4%)" "ATP binding (25%) ATP-dependent protein folding chaperone (25%) unfolded protein binding (24.1%)" "IPR013126 (17%) IPR018181 (17%) IPR029047 (17%)" "Heat shock protein 70 family (17%) Heat shock protein 70, conserved site (17%) Heat shock protein 70kD, peptide-binding domain superfamily (17%)" ASEESPYNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.2.7.8 (100%) indolepyruvate ferredoxin oxidoreductase (100%) GO:0044281 (20%) "GO:0030976 (20%) GO:0043805 (20%) GO:0046872 (20%)" small molecule metabolic process (20%) "thiamine pyrophosphate binding (20%) indolepyruvate ferredoxin oxidoreductase activity (20%) metal ion binding (20%)" "IPR002880 (20%) IPR011766 (20%) IPR017721 (20%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20%) Thiamine pyrophosphate enzyme, TPP-binding (20%) Indolepyruvate oxidoreductase subunit IorA (20%)" HLDSSLMLVTALNPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.1.2 (100%) fumarate hydratase (100%) "GO:0006099 (20%) GO:0006106 (20%) GO:0006108 (20%)" GO:0005737 (20%) GO:0004333 (20%) "tricarboxylic acid cycle (20%) fumarate metabolic process (20%) malate metabolic process (20%)" cytoplasm (20%) fumarate hydratase activity (20%) "IPR000362 (14.3%) IPR005677 (14.3%) IPR008948 (14.3%)" "Fumarate lyase family (14.3%) Fumarate hydratase, class II (14.3%) L-Aspartase-like (14.3%)" QGANQPLLPEFKDDEDQEFAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006353 (25%) GO:0031564 (25%)" GO:0005829 (25%) GO:0003723 (25%) "DNA-templated transcription termination (25%) transcription antitermination (25%)" cytosol (25%) RNA binding (25%) "IPR006027 (33.3%) IPR011605 (33.3%) IPR035926 (33.3%)" "NusB/RsmB/TIM44 (33.3%) NusB antitermination factor (33.3%) NusB-like superfamily (33.3%)" MAPPQISAEVLK root 3.6.4.10 (100%) non-chaperonin molecular chaperone ATPase (100%) "GO:0042026 (0.1%) GO:0051085 (0.1%) GO:0006260 (0.1%)" "GO:0005829 (0.1%) GO:0005737 (0%) GO:0005886 (0%)" "GO:0005524 (27.6%) GO:0140662 (27.6%) GO:0051082 (26.6%)" "protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%) DNA replication (0.1%)" "cytosol (0.1%) cytoplasm (0%) plasma membrane (0%)" "ATP binding (27.6%) ATP-dependent protein folding chaperone (27.6%) unfolded protein binding (26.6%)" "IPR013126 (17%) IPR043129 (16.9%) IPR018181 (16.9%)" "Heat shock protein 70 family (17%) ATPase, nucleotide binding domain (16.9%) Heat shock protein 70, conserved site (16.9%)" LSSASELNIPYFSK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0005829 (50%) GO:0016491 (50%) cytosol (50%) oxidoreductase activity (50%) IPR004017 (100%) Cysteine-rich domain (100%) QLTPHPWDALDANLQVGDKVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" AVGAAEGVIYIFDMAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0050821 (33.3%) GO:0005829 (33.3%) GO:0051082 (33.3%) protein stabilization (33.3%) cytosol (33.3%) unfolded protein binding (33.3%) "IPR005632 (50%) IPR024930 (50%)" "Chaperone protein Skp (50%) Skp domain superfamily (50%)" QALELPRELFEEQAK root "5.2.1.8 (99.9%) 3.4.21.92 (0.1%)" "peptidylprolyl isomerase (99.9%) endopeptidase Clp (0.1%)" "GO:0015031 (12.6%) GO:0051301 (12.4%) GO:0043335 (12.1%)" "GO:0005737 (12.4%) GO:0005759 (0%) GO:0005829 (0%)" "GO:0003755 (12.6%) GO:0043022 (12.1%) GO:0044183 (12.1%)" "protein transport (12.6%) cell division (12.4%) protein unfolding (12.1%)" "cytoplasm (12.4%) mitochondrial matrix (0%) cytosol (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.6%) ribosome binding (12.1%) protein folding chaperone (12.1%)" "IPR008880 (12.6%) IPR027304 (12.6%) IPR037041 (12.6%)" "Trigger factor, C-terminal (12.6%) Trigger factor/SurA domain superfamily (12.6%) Trigger factor, C-terminal domain superfamily (12.6%)" IREFGEAVDAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)" GLGVVYHLESTVTGER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "7.1.1.- (97.4%) 1.6.5.11 (2.6%)" "Hydron translocation or charge separation linked to oxidoreductase reactions (97.4%) Transferred entry: 1.6.5.9 (2.6%)" "GO:0005886 (14.4%) GO:0030964 (14.4%) GO:0005737 (13.3%)" "GO:0008137 (14.4%) GO:0048038 (14.4%) GO:0050136 (14.4%)" "plasma membrane (14.4%) NADH dehydrogenase complex (14.4%) cytoplasm (13.3%)" "NADH dehydrogenase (ubiquinone) activity (14.4%) quinone binding (14.4%) NADH dehydrogenase (quinone) (non-electrogenic) activity (14.4%)" "IPR001135 (14.3%) IPR001268 (14.3%) IPR020396 (14.3%)" "NADH-quinone oxidoreductase, subunit D (14.3%) NADH:ubiquinone oxidoreductase, 30kDa subunit (14.3%) NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site (14.3%)" FSTFYASQVYADQPYSETGILNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.1.88 (100%) L-glutamate gamma-semialdehyde dehydrogenase (100%) GO:0010133 (25.2%) GO:0009898 (25.2%) "GO:0003842 (25.2%) GO:0004657 (24.3%)" L-proline catabolic process to L-glutamate (25.2%) cytoplasmic side of plasma membrane (25.2%) "L-glutamate gamma-semialdehyde dehydrogenase activity (25.2%) proline dehydrogenase activity (24.3%)" "IPR015590 (14.4%) IPR016160 (14.4%) IPR016161 (14.4%)" "Aldehyde dehydrogenase domain (14.4%) Aldehyde dehydrogenase, cysteine active site (14.4%) Aldehyde/histidinol dehydrogenase (14.4%)" KNVEYLIADVAGETR Citrobacter Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Citrobacter "IPR009778 (33.3%) IPR023534 (33.3%) IPR038626 (33.3%)" "Modulator of Rho-dependent transcription termination (33.3%) Rof/RNase P-like (33.3%) Rof-like superfamily (33.3%)" AMVGNNVSHSK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001383 (25%) IPR026569 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL28, bacteria (25%) Large ribosomal subunit protein bL28 (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" GALIDSQAAIEALKNQK root 1.1.1.28 (100%) D-lactate dehydrogenase (100%) "GO:0006089 (0.1%) GO:0009408 (0.1%) GO:0019664 (0.1%)" GO:0005829 (33%) "GO:0008720 (33.1%) GO:0051287 (33.1%) GO:0016491 (0.3%)" "lactate metabolic process (0.1%) response to heat (0.1%) mixed acid fermentation (0.1%)" cytosol (33%) "D-lactate dehydrogenase (NAD+) activity (33.1%) NAD binding (33.1%) oxidoreductase activity (0.3%)" "IPR006140 (20.2%) IPR036291 (20.2%) IPR029753 (20.2%)" "D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (20.2%) NAD(P)-binding domain superfamily (20.2%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (20.2%)" AEQAIIEACEEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.6%) GO:0005737 (16.6%) "GO:0004829 (16.6%) GO:0005524 (16.6%) GO:0046872 (16.6%)" threonyl-tRNA aminoacylation (16.6%) cytoplasm (16.6%) "threonine-tRNA ligase activity (16.6%) ATP binding (16.6%) metal ion binding (16.6%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004154 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) Anticodon-binding (7.7%)" ISGAGIQESHVHDVTITK root 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (20.2%) GO:0006177 (19.7%) GO:0009411 (0%)" "GO:0016020 (0.1%) GO:0005737 (0%) GO:0005829 (0%)" "GO:0003938 (20.3%) GO:0046872 (20%) GO:0000166 (19.1%)" "GTP biosynthetic process (20.2%) GMP biosynthetic process (19.7%) response to UV (0%)" "membrane (0.1%) cytoplasm (0%) cytosol (0%)" "IMP dehydrogenase activity (20.3%) metal ion binding (20%) nucleotide binding (19.1%)" "IPR001093 (17.1%) IPR013785 (17.1%) IPR005990 (17%)" "IMP dehydrogenase/GMP reductase (17.1%) Aldolase-type TIM barrel (17.1%) Inosine-5'-monophosphate dehydrogenase (17%)" ASASMEVNKEQAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005886 (100%) plasma membrane (100%) "IPR027705 (26%) IPR001107 (24.7%) IPR031905 (24.7%)" "Flotillin family (26%) Band 7 domain (24.7%) Flotillin, C-terminal domain (24.7%)" DSAAVPSTVHCDHLIQAYK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 4.2.1.3 (100%) aconitate hydratase (100%) GO:0006099 (20%) GO:0005829 (20%) "GO:0003994 (20%) GO:0046872 (20%) GO:0051539 (20%)" tricarboxylic acid cycle (20%) cytosol (20%) "aconitate hydratase activity (20%) metal ion binding (20%) 4 iron, 4 sulfur cluster binding (20%)" "IPR000573 (11.1%) IPR001030 (11.1%) IPR006248 (11.1%)" "Aconitase A/isopropylmalate dehydratase small subunit, swivel domain (11.1%) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain (11.1%) Aconitase, mitochondrial-like (11.1%)" LADDLIGATSDTSCLVGYSSAMR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.7%) GO:0006531 (24.7%)" GO:0005829 (24.7%) "GO:0008797 (24.7%) GO:0016853 (1.3%)" "tricarboxylic acid cycle (24.7%) aspartate metabolic process (24.7%)" cytosol (24.7%) "aspartate ammonia-lyase activity (24.7%) isomerase activity (1.3%)" "IPR000362 (12.6%) IPR008948 (12.6%) IPR018951 (12.6%)" "Fumarate lyase family (12.6%) L-Aspartase-like (12.6%) Fumarase C, C-terminal (12.6%)" LLNTMQPDAPGTLISNAIEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.4 (100%) aspartate kinase (100%) "GO:0009089 (17.3%) GO:0009090 (17.3%) GO:0009088 (13.5%)" GO:0005829 (17.3%) "GO:0004072 (17.3%) GO:0005524 (17.3%)" "lysine biosynthetic process via diaminopimelate (17.3%) homoserine biosynthetic process (17.3%) threonine biosynthetic process (13.5%)" cytosol (17.3%) "aspartate kinase activity (17.3%) ATP binding (17.3%)" "IPR001048 (14.3%) IPR001341 (14.3%) IPR005260 (14.3%)" "Aspartate/glutamate/uridylate kinase (14.3%) Aspartate kinase (14.3%) Aspartate kinase, monofunctional class (14.3%)" HGNTSAASVPCALDEAVRDGR root "2.3.1.180 (98.5%) 2.3.1.41 (1.5%)" "beta-ketoacyl-[acyl-carrier-protein] synthase III (98.5%) beta-ketoacyl-[acyl-carrier-protein] synthase I (1.5%)" "GO:0006633 (25.4%) GO:0006631 (0%)" "GO:0005737 (24.1%) GO:0005829 (0%)" "GO:0033818 (25.1%) GO:0004315 (24.9%) GO:0016746 (0.3%)" "fatty acid biosynthetic process (25.4%) fatty acid metabolic process (0%)" "cytoplasm (24.1%) cytosol (0%)" "beta-ketoacyl-acyl-carrier-protein synthase III activity (25.1%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (24.9%) acyltransferase activity (0.3%)" "IPR013747 (25.3%) IPR016039 (25.3%) IPR013751 (24.8%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (25.3%) Thiolase-like (25.3%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (24.8%)" SGAEGGQIIENPILSNFK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.7%) GO:0000428 (16.7%) "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0000287 (16.4%)" DNA-templated transcription (16.7%) DNA-directed RNA polymerase complex (16.7%) "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) magnesium ion binding (16.4%)" "IPR007081 (9.2%) IPR007083 (9.2%) IPR038120 (9.2%)" "RNA polymerase Rpb1, domain 5 (9.2%) RNA polymerase Rpb1, domain 4 (9.2%) RNA polymerase Rpb1, funnel domain superfamily (9.2%)" VVCEATMMCAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "4.2.1.59 (99.5%) 4.2.1.- (0.5%)" "3-hydroxyacyl-[acyl-carrier-protein] dehydratase (99.5%) Hydro-lyases (0.5%)" "GO:0009245 (20%) GO:0006633 (19.5%)" "GO:0005737 (20%) GO:0016020 (20%)" "GO:0019171 (15.9%) GO:0016836 (3.6%) GO:0016829 (0.9%)" "lipid A biosynthetic process (20%) fatty acid biosynthetic process (19.5%)" "cytoplasm (20%) membrane (20%)" "(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (15.9%) hydro-lyase activity (3.6%) lyase activity (0.9%)" "IPR029069 (33.8%) IPR013114 (33.7%) IPR010084 (32.5%)" "HotDog domain superfamily (33.8%) Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ (33.7%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (32.5%)" ANVIQAEAEVPK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "GO:0005886 (51%) GO:0045121 (49%)" "plasma membrane (51%) membrane raft (49%)" IPR022853 (100%) Flotillin-like protein FloA (100%) VMAGLGIAVVSTSK root "GO:0006412 (16.8%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0005840 (17.1%) GO:1990904 (16.8%) GO:0005737 (15.5%)" "GO:0003735 (16.9%) GO:0019843 (16.6%) GO:0000049 (0%)" "translation (16.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "ribosome (17.1%) ribonucleoprotein complex (16.8%) cytoplasm (15.5%)" "structural constituent of ribosome (16.9%) rRNA binding (16.6%) tRNA binding (0%)" "IPR000630 (33.1%) IPR035987 (33.1%) IPR047863 (33.1%)" "Small ribosomal subunit protein uS8 (33.1%) Small ribosomal subunit protein uS8 superfamily (33.1%) Small ribosomal subunit protein uS8, conserved site (33.1%)" TLEEGLNKFPEEQYFLMSLINNYIYSNRNEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" VEGGQHLNVNVLR root 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006950 (0.1%) "GO:0005829 (47.2%) GO:0005737 (0.1%)" "GO:0008861 (48.7%) GO:0016829 (3.6%) GO:0003824 (0.4%)" response to stress (0.1%) "cytosol (47.2%) cytoplasm (0.1%)" "formate C-acetyltransferase activity (48.7%) lyase activity (3.6%) catalytic activity (0.4%)" "IPR001150 (25.2%) IPR050244 (25.1%) IPR019777 (25%)" "Glycine radical domain (25.2%) Autonomous Glycyl Radical Cofactor (25.1%) Formate C-acetyltransferase glycine radical, conserved site (25%)" IGAPADQKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.2%) "GO:0022625 (33.2%) GO:0005840 (0.4%)" GO:0003735 (33.2%) translation (33.2%) "cytosolic large ribosomal subunit (33.2%) ribosome (0.4%)" structural constituent of ribosome (33.2%) "IPR005996 (33.1%) IPR016082 (33.1%) IPR036919 (33.1%)" "Large ribosomal subunit protein uL30, bacteria (33.1%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (33.1%) Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily (33.1%)" FAFQQADGVRPFDLAVDQMFGSSPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) GO:0006189 (19.6%) GO:0005737 (19.6%) "GO:0004642 (19.6%) GO:0005524 (19.6%) GO:0046872 (19.6%)" 'de novo' IMP biosynthetic process (19.6%) cytoplasm (19.6%) "phosphoribosylformylglycinamidine synthase activity (19.6%) ATP binding (19.6%) metal ion binding (19.6%)" "IPR010073 (11.1%) IPR010918 (11.1%) IPR029062 (11.1%)" "Phosphoribosylformylglycinamidine synthase PurL (11.1%) PurM-like, C-terminal domain (11.1%) Class I glutamine amidotransferase-like (11.1%)" TFAMESPFTEDEFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (1.4%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (1.4%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" VECNQGKPQVNYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.3%) GO:0005737 (19.3%) "GO:0003746 (20.4%) GO:0005525 (20.3%) GO:0003924 (19.7%)" ribosome disassembly (20.3%) cytoplasm (19.3%) "translation elongation factor activity (20.4%) GTP binding (20.3%) GTPase activity (19.7%)" "IPR000640 (6.3%) IPR005517 (6.3%) IPR035649 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translation elongation factor EFG/EF2, domain IV (6.3%) EFG, domain V (6.3%)" AGMGYCGAANIEQLHDAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20.3%) GO:0006183 (20.3%)" "GO:0003938 (20.3%) GO:0046872 (20.3%) GO:0000166 (18.8%)" "GMP biosynthetic process (20.3%) GTP biosynthetic process (20.3%)" "IMP dehydrogenase activity (20.3%) metal ion binding (20.3%) nucleotide binding (18.8%)" "IPR001093 (17.1%) IPR005990 (17.1%) IPR013785 (17.1%)" "IMP dehydrogenase/GMP reductase (17.1%) Inosine-5'-monophosphate dehydrogenase (17.1%) Aldolase-type TIM barrel (17.1%)" SISLDGNNGKPYILIANMYASSPNWSDEAALNK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" PYVVAQPCVDVKDK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium "GO:0009055 (24%) GO:0046872 (24%) GO:0051538 (24%)" "electron transfer activity (24%) metal ion binding (24%) 3 iron, 4 sulfur cluster binding (24%)" "IPR000813 (20%) IPR017896 (20%) IPR017900 (20%)" "7Fe ferredoxin (20%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (20%) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (20%)" GKGTVSTESGVLNQQPYGFNTR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "1.11.1.15 (50%) 1.11.1.29 (37%) 1.11.1.24 (8.7%)" "Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (50%) mycoredoxin-dependent peroxiredoxin (37%) thioredoxin-dependent peroxiredoxin (8.7%)" "GO:0006979 (34.6%) GO:0006972 (0.1%) GO:0033194 (0.1%)" "GO:0005737 (30.1%) GO:0005829 (0.1%)" "GO:0004601 (33.5%) GO:0051920 (1.4%) GO:0140824 (0.1%)" "response to oxidative stress (34.6%) hyperosmotic response (0.1%) response to hydroperoxide (0.1%)" "cytoplasm (30.1%) cytosol (0.1%)" "peroxidase activity (33.5%) peroxiredoxin activity (1.4%) thioredoxin-dependent peroxiredoxin activity (0.1%)" "IPR015946 (20.1%) IPR052707 (20%) IPR036102 (20%)" "K homology domain-like, alpha/beta (20.1%) OsmC/Ohr Peroxiredoxin (20%) OsmC/Ohr superfamily (20%)" ADYADQVDK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" IGASSLVGDIEKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (25%) GO:0016052 (25%)" GO:0005737 (25%) GO:0004139 (25%) "deoxyribonucleotide catabolic process (25%) carbohydrate catabolic process (25%)" cytoplasm (25%) deoxyribose-phosphate aldolase activity (25%) "IPR002915 (33.3%) IPR011343 (33.3%) IPR013785 (33.3%)" "DeoC/FbaB/LacD aldolase (33.3%) Deoxyribose-phosphate aldolase (33.3%) Aldolase-type TIM barrel (33.3%)" KGAEGLNIAFLHPK Pseudomonadati Bacteria Pseudomonadati "5.1.99.1 (98.1%) 4.4.1.5 (0.9%) 5.1.99.- (0.9%)" "methylmalonyl-CoA epimerase (98.1%) lactoylglutathione lyase (0.9%) Acting on other compounds (0.9%)" GO:0046491 (46.3%) "GO:0004493 (46.3%) GO:0016829 (2.9%) GO:0004462 (1.6%)" L-methylmalonyl-CoA metabolic process (46.3%) "methylmalonyl-CoA epimerase activity (46.3%) lyase activity (2.9%) lactoylglutathione lyase activity (1.6%)" "IPR029068 (24.9%) IPR037523 (24.9%) IPR051785 (24.9%)" "Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (24.9%) Vicinal oxygen chelate (VOC), core domain (24.9%) Methylmalonyl-CoA/ethylmalonyl-CoA epimerase (24.9%)" YGEDPDIKYHPQIR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.5.2.3 (92.9%) 3.5.2.5 (7.1%)" "dihydroorotase (92.9%) allantoinase (7.1%)" GO:0006145 (21.6%) GO:0005737 (21.6%) "GO:0004038 (21.6%) GO:0046872 (21.6%) GO:0004151 (13.4%)" purine nucleobase catabolic process (21.6%) cytoplasm (21.6%) "allantoinase activity (21.6%) metal ion binding (21.6%) dihydroorotase activity (13.4%)" "IPR002195 (20%) IPR006680 (20%) IPR011059 (20%)" "Dihydroorotase, conserved site (20%) Amidohydrolase-related (20%) Metal-dependent hydrolase, composite domain superfamily (20%)" AEQLINEALTNPETKDNAATWDVAGYIQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" LYFCVDFLHVKPGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0043043 (32.2%) "GO:0005829 (30.5%) GO:0005737 (3.4%)" GO:0003746 (33.9%) peptide biosynthetic process (32.2%) "cytosol (30.5%) cytoplasm (3.4%)" translation elongation factor activity (33.9%) "IPR008991 (11.4%) IPR013185 (11.4%) IPR014722 (11.4%)" "Translation protein SH3-like domain superfamily (11.4%) Translation elongation factor, KOW-like (11.4%) Large ribosomal subunit protein uL2, domain 2 (11.4%)" AAIVGYGNIGR Bacteria Bacteria 1.4.1.16 (100%) diaminopimelate dehydrogenase (100%) "GO:0009089 (25%) GO:0019877 (25%)" "GO:0000166 (25%) GO:0047850 (25%)" "lysine biosynthetic process via diaminopimelate (25%) diaminopimelate biosynthetic process (25%)" "nucleotide binding (25%) diaminopimelate dehydrogenase activity (25%)" "IPR010190 (25.3%) IPR032094 (25.3%) IPR036291 (25.3%)" "Diaminopimelate dehydrogenase, Ddh (25.3%) Meso-diaminopimelate D-dehydrogenase, C-terminal (25.3%) NAD(P)-binding domain superfamily (25.3%)" VGDTVLYDKYAGSEVKYEGQDYLVLHEK Lacticaseibacillus Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus GO:0051085 (1.7%) GO:0005737 (15.4%) "GO:0005524 (16.6%) GO:0044183 (16.6%) GO:0046872 (16.6%)" obsolete chaperone cofactor-dependent protein refolding (1.7%) cytoplasm (15.4%) "ATP binding (16.6%) protein folding chaperone (16.6%) metal ion binding (16.6%)" "IPR011032 (25.4%) IPR020818 (25.4%) IPR037124 (25.4%)" "GroES-like superfamily (25.4%) GroES chaperonin family (25.4%) GroES chaperonin superfamily (25.4%)" YLIHSNELHLIDQER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides KVTMQNLFHDGGFSSVGMSLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" YVDGPDYGGVFQMNPGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.1.- (100%) Methyltransferases (100%) "GO:0009117 (43.6%) GO:0032259 (3.6%)" "GO:0003824 (40%) GO:0016787 (9.1%) GO:0008168 (3.6%)" "nucleotide metabolic process (43.6%) methylation (3.6%)" "catalytic activity (40%) hydrolase activity (9.1%) methyltransferase activity (3.6%)" "IPR011146 (34.9%) IPR036265 (34.9%) IPR001310 (30.1%)" "HIT-like domain (34.9%) HIT-like superfamily (34.9%) Histidine triad (HIT) protein (30.1%)" GIEDGTWEQGTAQYEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "1.2.7.1 (60%) 1.2.1.51 (20%) 1.2.7.- (20%)" "pyruvate synthase (60%) pyruvate dehydrogenase (NADP(+)) (20%) With an iron-sulfur protein as acceptor (20%)" "GO:0006979 (14.5%) GO:0022900 (14.5%) GO:0044281 (11.3%)" "GO:0005506 (14.5%) GO:0030976 (14.5%) GO:0051539 (14.5%)" "response to oxidative stress (14.5%) electron transport chain (14.5%) small molecule metabolic process (11.3%)" "iron ion binding (14.5%) thiamine pyrophosphate binding (14.5%) 4 iron, 4 sulfur cluster binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" LSIAYGIAQAMHR root 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) "GO:0006633 (34.1%) GO:0009102 (29.4%) GO:0030497 (0.2%)" "GO:0005829 (0.1%) GO:0005886 (0.1%) GO:0016020 (0.1%)" "GO:0004318 (34.8%) GO:0016491 (0.4%) GO:0042802 (0.2%)" "fatty acid biosynthetic process (34.1%) biotin biosynthetic process (29.4%) fatty acid elongation (0.2%)" "cytosol (0.1%) plasma membrane (0.1%) membrane (0.1%)" "enoyl-[acyl-carrier-protein] reductase (NADH) activity (34.8%) oxidoreductase activity (0.4%) identical protein binding (0.2%)" "IPR036291 (33.4%) IPR002347 (33.4%) IPR014358 (32.9%)" "NAD(P)-binding domain superfamily (33.4%) Short-chain dehydrogenase/reductase SDR (33.4%) Enoyl-[acyl-carrier-protein] reductase (NADH) (32.9%)" ADLKAFAEQLVNLTVK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (25%) "GO:0022625 (25%) GO:0005840 (0.1%)" "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) "cytosolic large ribosomal subunit (25%) ribosome (0.1%)" "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" MVNSGTEATMSAIR root "5.4.3.8 (99.9%) 2.6.1.- (0.1%)" "glutamate-1-semialdehyde 2,1-aminomutase (99.9%) Transaminases (0.1%)" "GO:0006782 (19.7%) GO:0006779 (0.2%) GO:0009228 (0%)" "GO:0005737 (19.5%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0008483 (20.1%) GO:0030170 (20.1%) GO:0042286 (19.9%)" "protoporphyrinogen IX biosynthetic process (19.7%) porphyrin-containing compound biosynthetic process (0.2%) thiamine biosynthetic process (0%)" "cytoplasm (19.5%) cytosol (0%) membrane (0%)" "transaminase activity (20.1%) pyridoxal phosphate binding (20.1%) glutamate-1-semialdehyde 2,1-aminomutase activity (19.9%)" "IPR005814 (16.8%) IPR015424 (16.8%) IPR015421 (16.7%)" "Aminotransferase class-III (16.8%) Pyridoxal phosphate-dependent transferase (16.8%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" LYQPQDATTNPSLILNAAQIPEYRK root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (24.8%) GO:0009052 (0.1%)" "GO:0005829 (24.9%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0004801 (25%) GO:0016740 (0.2%) GO:0016744 (0%)" "carbohydrate metabolic process (25%) pentose-phosphate shunt (24.8%) pentose-phosphate shunt, non-oxidative branch (0.1%)" "cytosol (24.9%) cytoplasm (0%) membrane (0%)" "transaldolase activity (25%) transferase activity (0.2%) transketolase or transaldolase activity (0%)" "IPR013785 (25.2%) IPR018225 (25.2%) IPR001585 (25.1%)" "Aldolase-type TIM barrel (25.2%) Transaldolase, active site (25.2%) Transaldolase/Fructose-6-phosphate aldolase (25.1%)" ASKDLTTVLTLK Phocaeicola vulgatus Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus "IPR009081 (50%) IPR036736 (50%)" "Phosphopantetheine binding ACP domain (50%) ACP-like superfamily (50%)" SMLAEECELNPFLESK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006089 (33.3%) "GO:0046872 (33.3%) GO:0051539 (31.4%) GO:0051536 (2%)" lactate metabolic process (33.3%) "metal ion binding (33.3%) 4 iron, 4 sulfur cluster binding (31.4%) iron-sulfur cluster binding (2%)" "IPR003741 (14.8%) IPR004452 (14.8%) IPR017896 (14.8%)" "LUD domain (14.8%) L-lactate oxidation iron-sulfur protein LutB/LldF (14.8%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14.8%)" GAHHINVNVLNR root "2.3.1.54 (99.7%) 1.17.4.2 (0.3%)" "formate C-acetyltransferase (99.7%) ribonucleoside-triphosphate reductase (thioredoxin) (0.3%)" "GO:0006006 (31.3%) GO:0005975 (0.6%)" GO:0005829 (33.4%) "GO:0008861 (33.4%) GO:0016829 (1.1%) GO:0008998 (0.1%)" "glucose metabolic process (31.3%) carbohydrate metabolic process (0.6%)" cytosol (33.4%) "formate C-acetyltransferase activity (33.4%) lyase activity (1.1%) ribonucleoside-triphosphate reductase (thioredoxin) activity (0.1%)" "IPR001150 (20.2%) IPR019777 (20.2%) IPR050244 (20.2%)" "Glycine radical domain (20.2%) Formate C-acetyltransferase glycine radical, conserved site (20.2%) Autonomous Glycyl Radical Cofactor (20.2%)" NVENVVNIYFTSATTSKEDKPGIQTEYHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) LANLLLSEIKGEELKFF Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.1.2.4 (100%) deoxyribose-phosphate aldolase (100%) "GO:0009264 (24.7%) GO:0016052 (24.7%)" GO:0005737 (24.7%) "GO:0004139 (24.7%) GO:0016829 (1.2%)" "deoxyribonucleotide catabolic process (24.7%) carbohydrate catabolic process (24.7%)" cytoplasm (24.7%) "deoxyribose-phosphate aldolase activity (24.7%) lyase activity (1.2%)" "IPR002915 (33.3%) IPR011343 (33.3%) IPR013785 (33.3%)" "DeoC/FbaB/LacD aldolase (33.3%) Deoxyribose-phosphate aldolase (33.3%) Aldolase-type TIM barrel (33.3%)" NTSYEIFYAALETVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20.7%) "GO:0015935 (20.7%) GO:0005840 (0.2%)" "GO:0003735 (20.7%) GO:0019843 (20.7%) GO:0000049 (16.9%)" translation (20.7%) "small ribosomal subunit (20.7%) ribosome (0.2%)" "structural constituent of ribosome (20.7%) rRNA binding (20.7%) tRNA binding (16.9%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" CAAPSNYDADYCYSLGYTASCLIAAGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.4%) GO:0006002 (13.8%)" GO:0005829 (14.4%) "GO:0003872 (14.4%) GO:0005524 (14.4%) GO:0046872 (14.4%)" "response to glucose (14.4%) fructose 6-phosphate metabolic process (13.8%)" cytosol (14.4%) "6-phosphofructokinase activity (14.4%) ATP binding (14.4%) metal ion binding (14.4%)" "IPR000023 (25.3%) IPR011183 (25.3%) IPR035966 (25.3%)" "Phosphofructokinase domain (25.3%) Pyrophosphate-dependent phosphofructokinase PfpB (25.3%) Phosphofructokinase superfamily (25.3%)" ELLSFYDFDGDNTPIIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (20.1%) GO:0032045 (0.6%)" "GO:0003746 (20.1%) GO:0003924 (20.1%) GO:0005525 (20.1%)" "cytosol (20.1%) guanyl-nucleotide exchange factor complex (0.6%)" "translation elongation factor activity (20.1%) GTPase activity (20.1%) GTP binding (20.1%)" "IPR000795 (8.4%) IPR005225 (8.4%) IPR027417 (8.4%)" "Translational (tr)-type GTP-binding domain (8.4%) Small GTP-binding domain (8.4%) P-loop containing nucleoside triphosphate hydrolase (8.4%)" GYVEQGIIQGGMIPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.8 (100%) acetylglutamate kinase (100%) "GO:0042450 (24.2%) GO:0006526 (3%)" GO:0005737 (24.2%) "GO:0003991 (24.2%) GO:0005524 (24.2%)" "L-arginine biosynthetic process via ornithine (24.2%) L-arginine biosynthetic process (3%)" cytoplasm (24.2%) "acetylglutamate kinase activity (24.2%) ATP binding (24.2%)" "IPR001048 (25%) IPR004662 (25%) IPR036393 (25%)" "Aspartate/glutamate/uridylate kinase (25%) Acetylglutamate kinase family (25%) Acetylglutamate kinase-like superfamily (25%)" EVLHNPSYDVLFAEETKPGLEGFEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17%) GO:0005829 (17%) "GO:0004612 (17%) GO:0005524 (17%) GO:0046872 (17%)" gluconeogenesis (17%) cytosol (17%) "phosphoenolpyruvate carboxykinase (ATP) activity (17%) ATP binding (17%) metal ion binding (17%)" "IPR001272 (25%) IPR008210 (25%) IPR013035 (25%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25%) Phosphoenolpyruvate carboxykinase, N-terminal (25%) Phosphoenolpyruvate carboxykinase, C-terminal (25%)" SHADAELKEYLQQLGEHQTTSIGSSLK root "3.1.3.7 (99.2%) 3.1.3.57 (0.8%)" "3'(2'),5'-bisphosphate nucleotidase (99.2%) inositol-1,4-bisphosphate 1-phosphatase (0.8%)" "GO:0000103 (16.9%) GO:0050427 (16.9%) GO:0046854 (16.3%)" GO:0005886 (16.1%) "GO:0008441 (16.9%) GO:0000287 (16.1%) GO:0046872 (0.7%)" "sulfate assimilation (16.9%) 3'-phosphoadenosine 5'-phosphosulfate metabolic process (16.9%) phosphatidylinositol phosphate biosynthetic process (16.3%)" plasma membrane (16.1%) "3'(2'),5'-bisphosphate nucleotidase activity (16.9%) magnesium ion binding (16.1%) metal ion binding (0.7%)" "IPR000760 (20.5%) IPR050725 (20.5%) IPR020550 (19.9%)" "Inositol monophosphatase-like (20.5%) CysQ/Inositol Monophosphatase (20.5%) Inositol monophosphatase, conserved site (19.9%)" SSYNNGDRPSYNR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (32.8%) "GO:0003723 (32.8%) GO:0120159 (32.8%) GO:0016829 (1.7%)" enzyme-directed rRNA pseudouridine synthesis (32.8%) "RNA binding (32.8%) rRNA pseudouridine synthase activity (32.8%) lyase activity (1.7%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" NYGSLIGEATAER root "GO:0008360 (24.9%) GO:0000902 (24.8%) GO:0043093 (0.1%)" "GO:0005737 (25%) GO:0005856 (0.1%) GO:0005886 (0.1%)" "GO:0005524 (24.9%) GO:0042802 (0%)" "regulation of cell shape (24.9%) cell morphogenesis (24.8%) FtsZ-dependent cytokinesis (0.1%)" "cytoplasm (25%) cytoskeleton (0.1%) plasma membrane (0.1%)" "ATP binding (24.9%) identical protein binding (0%)" "IPR056546 (33.4%) IPR043129 (33.3%) IPR004753 (33.2%)" "MreB/MamK-like (33.4%) ATPase, nucleotide binding domain (33.3%) Cell shape determining protein MreB (33.2%)" VDGVFTADPAKDPTATMYEQLTYSEVLEKELK root 2.7.4.22 (100%) UMP kinase (100%) "GO:0006225 (20.1%) GO:0044210 (18.4%) GO:0006221 (0.2%)" GO:0005829 (20.1%) "GO:0005524 (20.1%) GO:0033862 (20.1%) GO:0016301 (0.7%)" "UDP biosynthetic process (20.1%) 'de novo' CTP biosynthetic process (18.4%) pyrimidine nucleotide biosynthetic process (0.2%)" cytosol (20.1%) "ATP binding (20.1%) UMP kinase activity (20.1%) kinase activity (0.7%)" "IPR001048 (25.9%) IPR036393 (25.9%) IPR015963 (24.4%)" "Aspartate/glutamate/uridylate kinase (25.9%) Acetylglutamate kinase-like superfamily (25.9%) Uridylate kinase, bacteria (24.4%)" EIDYQAISYYADPTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016226 (99.1%) GO:1990229 (0.9%) iron-sulfur cluster assembly (99.1%) iron-sulfur cluster assembly complex (0.9%) "IPR000825 (20%) IPR010231 (20%) IPR037284 (20%)" "SUF system FeS cluster assembly, SufBD core domain (20%) SUF system FeS cluster assembly, SufB (20%) SUF system FeS cluster assembly, SufBD superfamily (20%)" VQLDEIGTVLQVSDGVVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "7.1.2.2 (98%) 3.6.3.14 (2%)" "H(+)-transporting two-sector ATPase (98%) Transferred entry: 7.1.2.2 (2%)" GO:0015986 (0.4%) "GO:0045259 (18.2%) GO:0005886 (17.1%)" "GO:0005524 (18.2%) GO:0043531 (18.2%) GO:0046933 (18.2%)" proton motive force-driven ATP synthesis (0.4%) "proton-transporting ATP synthase complex (18.2%) plasma membrane (17.1%)" "ATP binding (18.2%) ADP binding (18.2%) proton-transporting ATP synthase activity, rotational mechanism (18.2%)" "IPR000194 (10.1%) IPR004100 (10.1%) IPR005294 (10.1%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (10.1%) ATP synthase, F1 complex, alpha subunit (10.1%)" KLTSSIVGNWSLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR032573 (100%) Protein of unknown function DUF4925 (100%) HGAVLIDNSSAYR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11%) GO:0009089 (11%) GO:0009097 (11%)" "GO:0051287 (11.6%) GO:0004073 (11%) GO:0046983 (11%)" "threonine biosynthetic process (11%) lysine biosynthetic process via diaminopimelate (11%) isoleucine biosynthetic process (11%)" "NAD binding (11.6%) aspartate-semialdehyde dehydrogenase activity (11%) protein dimerization activity (11%)" "IPR000534 (17.2%) IPR036291 (17.2%) IPR000319 (16.4%)" "Semialdehyde dehydrogenase, NAD-binding (17.2%) NAD(P)-binding domain superfamily (17.2%) Aspartate-semialdehyde dehydrogenase, conserved site (16.4%)" YQYKDPYTGEEEEILIENTETR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (49.1%) "GO:0016149 (48.7%) GO:0016787 (1.3%) GO:0003747 (0.9%)" cytoplasm (49.1%) "translation release factor activity, codon specific (48.7%) hydrolase activity (1.3%) translation release factor activity (0.9%)" "IPR000352 (25.2%) IPR045853 (25.2%) IPR005139 (24.9%)" "Peptide chain release factor class I (25.2%) Peptide chain release factor class I superfamily (25.2%) Peptide chain release factor (24.9%)" TILWNGPVGVFEFPNFRK root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006096 (16.6%) GO:0006094 (16.6%) GO:0008615 (0%)" "GO:0005829 (16.6%) GO:0005737 (0%)" "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "glycolytic process (16.6%) gluconeogenesis (16.6%) pyridoxine biosynthetic process (0%)" "cytosol (16.6%) cytoplasm (0%)" "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (25.6%) IPR015824 (25.6%) IPR036043 (25.6%)" "Phosphoglycerate kinase (25.6%) Phosphoglycerate kinase, N-terminal (25.6%) Phosphoglycerate kinase superfamily (25.6%)" GVNTSAIFGFINSLEDVLKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.7.7 (100%) DNA-directed DNA polymerase (100%) "GO:0006261 (16.7%) GO:0006302 (16.7%)" "GO:0003677 (16.7%) GO:0003887 (16.7%) GO:0008408 (16.7%)" "DNA-templated DNA replication (16.7%) double-strand break repair (16.7%)" "DNA binding (16.7%) DNA-directed DNA polymerase activity (16.7%) 3'-5' exonuclease activity (16.7%)" "IPR001098 (7.1%) IPR002298 (7.1%) IPR002421 (7.1%)" "DNA-directed DNA polymerase, family A, palm domain (7.1%) DNA polymerase A (7.1%) 5'-3' exonuclease (7.1%)" HYEEEKEAASR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.3.4.14 (88.9%) 6.4.1.1 (5.6%) 6.4.1.7 (5.6%)" "biotin carboxylase (88.9%) pyruvate carboxylase (5.6%) 2-oxoglutarate carboxylase (5.6%)" GO:2001295 (17.3%) "GO:0005524 (22.2%) GO:0046872 (22.2%) GO:0003989 (16%)" malonyl-CoA biosynthetic process (17.3%) "ATP binding (22.2%) metal ion binding (22.2%) acetyl-CoA carboxylase activity (16%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" YHAHDEKNECNVGDTVHIMETRPLSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (25%) GO:0022627 (25%) "GO:0003735 (25%) GO:0019843 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "structural constituent of ribosome (25%) rRNA binding (25%)" "IPR000266 (25%) IPR012340 (25%) IPR019979 (25%)" "Small ribosomal subunit protein uS17 (25%) Nucleic acid-binding, OB-fold (25%) Small ribosomal subunit protein uS17, conserved site (25%)" TCEETQPICFENAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales IPR025964 (100%) GGGtGRT protein (100%) SQEGGDENGERAPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0003723 (33.3%) GO:0008990 (33.3%) GO:0070043 (33.3%)" "RNA binding (33.3%) rRNA (guanine-N2-)-methyltransferase activity (33.3%) rRNA (guanine-N7-)-methyltransferase activity (33.3%)" "IPR000241 (16.7%) IPR002052 (16.7%) IPR004114 (16.7%)" "Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain (16.7%) DNA methylase, N-6 adenine-specific, conserved site (16.7%) THUMP domain (16.7%)" MRKEDKGVIIGQLAETVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" GTVHHPGENVGIGKDHTLYALVDGVVTFR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001684 (50%) IPR018261 (50%)" "Large ribosomal subunit protein bL27 (50%) Large ribosomal subunit protein bL27, conserved site (50%)" AAGNNGLWEVTVALKNYDEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae LPEGMKENQKFPEPIVTPTTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" LIPITSQNRIPLLQNGTFDFECGSTTNNVER root "GO:0006865 (32.6%) GO:0015813 (0.3%) GO:0070778 (0.3%)" "GO:0005576 (32.6%) GO:0030288 (32.4%) GO:0016020 (0.3%)" "GO:0016595 (0.3%) GO:0070335 (0.3%)" "amino acid transport (32.6%) L-glutamate transmembrane transport (0.3%) L-aspartate transmembrane transport (0.3%)" "extracellular region (32.6%) outer membrane-bounded periplasmic space (32.4%) membrane (0.3%)" "glutamate binding (0.3%) aspartate binding (0.3%)" "IPR001638 (50%) IPR051455 (50%)" "Solute-binding protein family 3/N-terminal domain of MltF (50%) Bacterial solute-binding protein 3 (50%)" FCTTEGIDKVITLSVFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" TIAFAITDGQLPSNAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR002318 (9.1%) IPR003156 (9.1%) IPR009000 (9.1%)" "Alanine-tRNA ligase, class IIc (9.1%) DHHA1 domain (9.1%) Translation protein, beta-barrel domain superfamily (9.1%)" QAQEAVSAQATR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (33.3%) GO:0022627 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic small ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001865 (26.7%) IPR005706 (26.7%) IPR023591 (26.7%)" "Small ribosomal subunit protein uS2 (26.7%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (26.7%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (26.7%)" DKMTAAGFDIKPTQSAICAVMLYDAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.29 (100%) glycine C-acetyltransferase (100%) "GO:0019518 (14.1%) GO:0030148 (14.1%) GO:0006567 (0.3%)" "GO:0005829 (14.4%) GO:0016020 (14.1%)" "GO:0008890 (14.4%) GO:0030170 (14.4%) GO:0016874 (7.1%)" "L-threonine catabolic process to glycine (14.1%) sphingolipid biosynthetic process (14.1%) L-threonine catabolic process (0.3%)" "cytosol (14.4%) membrane (14.1%)" "glycine C-acetyltransferase activity (14.4%) pyridoxal phosphate binding (14.4%) ligase activity (7.1%)" "IPR004839 (16.7%) IPR011282 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class I/classII, large domain (16.7%) 2-amino-3-ketobutyrate coenzyme A ligase (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" MLGSFNHGSMANAMPQAIGAALAYPGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.2.5.1 (100%) pyruvate dehydrogenase (quinone) (100%) "GO:0019752 (23.8%) GO:0044281 (1.2%)" "GO:0000287 (25%) GO:0030976 (25%) GO:0003824 (21.4%)" "carboxylic acid metabolic process (23.8%) small molecule metabolic process (1.2%)" "magnesium ion binding (25%) thiamine pyrophosphate binding (25%) catalytic activity (21.4%)" "IPR000399 (11.2%) IPR011766 (11.2%) IPR012001 (11.2%)" "TPP-binding enzyme, conserved site (11.2%) Thiamine pyrophosphate enzyme, TPP-binding (11.2%) Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (11.2%)" DGFIANVGDFEANPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR013766 (33.3%) IPR017937 (33.3%) IPR036249 (33.3%)" "Thioredoxin domain (33.3%) Thioredoxin, conserved site (33.3%) Thioredoxin-like superfamily (33.3%)" DIQTVAVNKEYPR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25.3%) GO:0009341 (25.3%) "GO:0004565 (25.3%) GO:0030246 (24.1%)" lactose catabolic process (25.3%) beta-galactosidase complex (25.3%) "beta-galactosidase activity (25.3%) carbohydrate binding (24.1%)" "IPR006104 (7.3%) IPR008979 (7.3%) IPR050347 (7.3%)" "Glycosyl hydrolases family 2, sugar binding domain (7.3%) Galactose-binding-like domain superfamily (7.3%) Bacterial Beta-galactosidase (7.3%)" EIVECHFTTGPYTMLTK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0043200 (31.5%) GO:0006355 (0.3%)" GO:0005829 (31.5%) "GO:0043565 (36.3%) GO:0003700 (0.3%)" "response to amino acid (31.5%) regulation of DNA-templated transcription (0.3%)" cytosol (31.5%) "sequence-specific DNA binding (36.3%) DNA-binding transcription factor activity (0.3%)" "IPR000485 (16.4%) IPR011008 (16.4%) IPR019887 (16.4%)" "AsnC-type HTH domain (16.4%) Dimeric alpha-beta barrel (16.4%) Transcription regulator AsnC/Lrp, ligand binding domain (16.4%)" VKKEYPQFDVR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (9.1%) GO:0030388 (9.1%) GO:0061621 (9.1%)" GO:0005945 (9.1%) "GO:0003872 (9.1%) GO:0005524 (9.1%) GO:0016208 (9.1%)" "fructose 6-phosphate metabolic process (9.1%) fructose 1,6-bisphosphate metabolic process (9.1%) canonical glycolysis (9.1%)" 6-phosphofructokinase complex (9.1%) "6-phosphofructokinase activity (9.1%) ATP binding (9.1%) AMP binding (9.1%)" "IPR000023 (16.7%) IPR012003 (16.7%) IPR012828 (16.7%)" "Phosphofructokinase domain (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (16.7%) ATP-dependent 6-phosphofructokinase, prokaryotic (16.7%)" LELAAPGMTKEDFSVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" FASDITLDYKGK Streptococcus Bacteria Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus 2.7.11.- (100%) Protein-serine/threonine kinases (100%) GO:0009401 (42.3%) GO:0005737 (42.3%) GO:0016740 (15.4%) phosphoenolpyruvate-dependent sugar phosphotransferase system (42.3%) cytoplasm (42.3%) transferase activity (15.4%) "IPR000032 (20%) IPR001020 (20%) IPR002114 (20%)" "Phosphocarrier protein HPr-like (20%) Phosphotransferase system, HPr histidine phosphorylation site (20%) Phosphotransferase system, HPr serine phosphorylation site (20%)" GLAEDATDEEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" IFNDIQHTITGWPGGKPNADDSNRPER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.8%) GO:0006044 (32.8%)" "GO:0004342 (32.8%) GO:0016853 (1.7%)" "carbohydrate metabolic process (32.8%) N-acetylglucosamine metabolic process (32.8%)" "glucosamine-6-phosphate deaminase activity (32.8%) isomerase activity (1.7%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" AYWDDGAQVLAPHDK Bacteroidota Bacteria Pseudomonadati Bacteroidota "5.4.2.2 (63.6%) 5.4.2.- (31.8%) 5.4.2.8 (4.5%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (63.6%) Phosphotransferases (phosphomutases) (31.8%) phosphomannomutase (4.5%)" "GO:0005975 (24.3%) GO:0006166 (24.3%)" "GO:0000287 (24.3%) GO:0008973 (24.3%) GO:0004614 (2.8%)" "carbohydrate metabolic process (24.3%) purine ribonucleoside salvage (24.3%)" "magnesium ion binding (24.3%) phosphopentomutase activity (24.3%) phosphoglucomutase activity (2.8%)" "IPR005844 (13%) IPR016055 (13%) IPR016066 (13%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (13%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (13%) Alpha-D-phosphohexomutase, conserved site (13%)" VGDEVEAVILTLDRDER Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) GO:0006412 (24.9%) GO:0022627 (24.9%) "GO:0003729 (24.9%) GO:0003735 (24.9%) GO:0004654 (0.4%)" translation (24.9%) cytosolic small ribosomal subunit (24.9%) "mRNA binding (24.9%) structural constituent of ribosome (24.9%) polyribonucleotide nucleotidyltransferase activity (0.4%)" "IPR003029 (23.4%) IPR012340 (23.4%) IPR035104 (23.4%)" "S1 domain (23.4%) Nucleic acid-binding, OB-fold (23.4%) Ribosomal protein S1-like (23.4%)" QLAEDPFNNWVALNKK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006412 (24.7%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.6%) GO:0005840 (0.6%) GO:1990904 (0.1%)" "GO:0003729 (24.7%) GO:0003735 (24.7%) GO:0003723 (0%)" "translation (24.7%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.6%) ribosome (0.6%) ribonucleoprotein complex (0.1%)" "mRNA binding (24.7%) structural constituent of ribosome (24.7%) RNA binding (0%)" "IPR003029 (20.2%) IPR012340 (20.2%) IPR050437 (20.2%)" "S1 domain (20.2%) Nucleic acid-binding, OB-fold (20.2%) Small ribosomal subunit protein bS1-like (20.2%)" LVVGAAVGAAVGYLAATDKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR024623 (100%) Uncharacterised protein family YtxH (100%) NLSDEEAAAIIAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.11.1.6 (100%) catalase (100%) "GO:0042542 (16.7%) GO:0042744 (16.7%)" GO:0005737 (16.7%) "GO:0004096 (16.7%) GO:0020037 (16.7%) GO:0046872 (16.7%)" "response to hydrogen peroxide (16.7%) hydrogen peroxide catabolic process (16.7%)" cytoplasm (16.7%) "catalase activity (16.7%) heme binding (16.7%) metal ion binding (16.7%)" "IPR002226 (12.5%) IPR010582 (12.5%) IPR011614 (12.5%)" "Catalase haem-binding site (12.5%) Catalase immune-responsive domain (12.5%) Catalase core domain (12.5%)" QIFSLDMGALIAGAK root "GO:0034605 (18.5%) GO:0042026 (17.3%) GO:0006508 (3.9%)" GO:0005737 (18.5%) "GO:0005524 (18.5%) GO:0016887 (18.5%) GO:0008233 (3.9%)" "cellular response to heat (18.5%) protein refolding (17.3%) proteolysis (3.9%)" cytoplasm (18.5%) "ATP binding (18.5%) ATP hydrolysis activity (18.5%) peptidase activity (3.9%)" "IPR003959 (8.4%) IPR050130 (8.4%) IPR003593 (8.4%)" "ATPase, AAA-type, core (8.4%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.4%) AAA+ ATPase domain (8.4%)" MLDEYLALMEEAKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.6%) GO:0005737 (16.6%) "GO:0000049 (16.6%) GO:0004829 (16.6%) GO:0005524 (16.6%)" threonyl-tRNA aminoacylation (16.6%) cytoplasm (16.6%) "tRNA binding (16.6%) threonine-tRNA ligase activity (16.6%) ATP binding (16.6%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" GLIYDRPNHDNFNVHGYEEQGSTTTPYDMVR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium "4.1.2.- (37.5%) 4.1.2.22 (37.5%) 4.1.2.9 (25%)" "Aldehyde-lyases (37.5%) fructose-6-phosphate phosphoketolase (37.5%) phosphoketolase (25%)" GO:0005975 (31.9%) "GO:0000287 (31.9%) GO:0016832 (23.5%) GO:0047905 (7.6%)" carbohydrate metabolic process (31.9%) "magnesium ion binding (31.9%) aldehyde-lyase activity (23.5%) fructose-6-phosphate phosphoketolase activity (7.6%)" "IPR005593 (13.8%) IPR009014 (13.8%) IPR018969 (13.8%)" "Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase (13.8%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (13.8%) Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal (13.8%)" IIKEAHDANIMFLIQQANLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0032259 (50%) GO:0008168 (50%) methylation (50%) methyltransferase activity (50%) "IPR011990 (60%) IPR019734 (37.1%) IPR036737 (2.9%)" "Tetratricopeptide-like helical domain superfamily (60%) Tetratricopeptide repeat (37.1%) OmpA-like domain superfamily (2.9%)" LMTDLPTVDITTFPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) ALNFGHTIGHAFESLSFLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.2.3.4 (100%) 3-dehydroquinate synthase (100%) "GO:0008652 (14.3%) GO:0009073 (14.3%) GO:0009423 (14.3%)" GO:0005737 (14.3%) "GO:0000166 (14.3%) GO:0003856 (14.3%) GO:0046872 (14.3%)" "amino acid biosynthetic process (14.3%) aromatic amino acid family biosynthetic process (14.3%) chorismate biosynthetic process (14.3%)" cytoplasm (14.3%) "nucleotide binding (14.3%) 3-dehydroquinate synthase activity (14.3%) metal ion binding (14.3%)" "IPR016037 (20%) IPR030960 (20%) IPR030963 (20%)" "3-dehydroquinate synthase AroB (20%) 3-dehydroquinate synthase, N-terminal domain (20%) 3-dehydroquinate synthase family (20%)" NIVLNIFPSLDTGVCATSVR Bacteria Bacteria "1.11.1.24 (94.4%) 1.11.1.- (5.6%)" "thioredoxin-dependent peroxiredoxin (94.4%) Peroxidases (5.6%)" GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" MAGMAIDGKDKGEAENEAKPIDVK root "7.1.1.- (90.8%) 1.6.5.11 (3.9%) 1.6.5.9 (3.9%)" "Hydron translocation or charge separation linked to oxidoreductase reactions (90.8%) Transferred entry: 1.6.5.9 (3.9%) NADH:ubiquinone reductase (non-electrogenic) (3.9%)" "GO:0009060 (16.6%) GO:0022904 (0%)" "GO:0005886 (16.5%) GO:0016020 (0.2%) GO:0045271 (0.1%)" "GO:0051539 (16.6%) GO:0048038 (16.5%) GO:0005506 (16.3%)" "aerobic respiration (16.6%) respiratory electron transport chain (0%)" "plasma membrane (16.5%) membrane (0.2%) respiratory chain complex I (0.1%)" "4 iron, 4 sulfur cluster binding (16.6%) quinone binding (16.5%) iron ion binding (16.3%)" "IPR010226 (33.3%) IPR017896 (33.3%) IPR017900 (33.3%)" "NADH-quinone oxidoreductase, chain I (33.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (33.3%) 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (33.3%)" QTHQTPVIMLTAR root 2.7.13.3 (100%) histidine kinase (100%) "GO:0006355 (19.9%) GO:0007155 (0.1%) GO:0010810 (0%)" "GO:0005829 (19.9%) GO:0032993 (19.9%) GO:0016020 (0.1%)" "GO:0000156 (19.9%) GO:0000976 (19.9%) GO:0000155 (0.1%)" "regulation of DNA-templated transcription (19.9%) cell adhesion (0.1%) regulation of cell-substrate adhesion (0%)" "cytosol (19.9%) protein-DNA complex (19.9%) membrane (0.1%)" "phosphorelay response regulator activity (19.9%) transcription cis-regulatory region binding (19.9%) phosphorelay sensor kinase activity (0.1%)" "IPR001789 (20.1%) IPR011006 (20.1%) IPR039420 (20%)" "Signal transduction response regulator, receiver domain (20.1%) CheY-like superfamily (20.1%) Transcriptional regulatory protein WalR-like (20%)" EMSSYSTSLSSLTGGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (25.3%) "GO:0003746 (25.3%) GO:0005525 (25.3%) GO:0003924 (24%)" ribosome disassembly (25.3%) "translation elongation factor activity (25.3%) GTP binding (25.3%) GTPase activity (24%)" "IPR000640 (7.7%) IPR005517 (7.7%) IPR009000 (7.7%)" "Elongation factor EFG, domain V-like (7.7%) Translation elongation factor EFG/EF2, domain IV (7.7%) Translation protein, beta-barrel domain superfamily (7.7%)" IFRLPQCESLISR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.3.5.2 (100%) dihydroorotate dehydrogenase (quinone) (100%) "GO:0006207 (19.7%) GO:0044205 (15.7%) GO:0006222 (3.9%)" "GO:0005737 (19.7%) GO:0005886 (19.7%)" "GO:0106430 (14.2%) GO:0004152 (5.5%) GO:0016491 (1.6%)" "'de novo' pyrimidine nucleobase biosynthetic process (19.7%) 'de novo' UMP biosynthetic process (15.7%) UMP biosynthetic process (3.9%)" "cytoplasm (19.7%) plasma membrane (19.7%)" "dihydroorotate dehydrogenase (quinone) activity (14.2%) dihydroorotate dehydrogenase activity (5.5%) oxidoreductase activity (1.6%)" "IPR001295 (16.7%) IPR005719 (16.7%) IPR005720 (16.7%)" "Dihydroorotate dehydrogenase, conserved site (16.7%) Dihydroorotate dehydrogenase, class 2 (16.7%) Dihydroorotate dehydrogenase, catalytic (16.7%)" VKDVVDTGKNQVEYVKDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis YYHDVEKEAMR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.8 (100%) polyribonucleotide nucleotidyltransferase (100%) "GO:0006396 (14.3%) GO:0006402 (14.3%) GO:0006401 (0%)" GO:0005829 (14.3%) "GO:0000175 (14.3%) GO:0003723 (14.3%) GO:0004654 (14.3%)" "RNA processing (14.3%) mRNA catabolic process (14.3%) RNA catabolic process (0%)" cytosol (14.3%) "3'-5'-RNA exonuclease activity (14.3%) RNA binding (14.3%) polyribonucleotide nucleotidyltransferase activity (14.3%)" "IPR001247 (7.9%) IPR012162 (7.9%) IPR015847 (7.9%)" "Exoribonuclease, phosphorolytic domain 1 (7.9%) Polyribonucleotide nucleotidyltransferase (7.9%) Exoribonuclease, phosphorolytic domain 2 (7.9%)" LADQFNKCGEIAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016853 (100%) isomerase activity (100%) "IPR006311 (20%) IPR013022 (20%) IPR019546 (20%)" "Twin-arginine translocation pathway, signal sequence (20%) Xylose isomerase-like, TIM barrel domain (20%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (20%)" GKLPLCQDTGTAIIHGEK Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (19.1%) "GO:0046872 (20.6%) GO:0051539 (20.6%) GO:0004333 (19.1%)" tricarboxylic acid cycle (19.1%) "metal ion binding (20.6%) 4 iron, 4 sulfur cluster binding (20.6%) fumarate hydratase activity (19.1%)" "IPR004646 (17.5%) IPR051208 (17.5%) IPR004647 (16.2%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (17.5%) Class-I Fumarase/Tartrate Dehydratase (17.5%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.2%)" EAGITVLVPNNDFHASK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR003489 (50%) IPR036567 (50%)" "Ribosome hibernation promoting factor/RaiA (50%) Ribosome hibernation promotion factor-like (50%)" FKPGAELTDAIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0030261 (25%) GO:0005829 (25%) "GO:0003677 (25%) GO:0030527 (25%)" chromosome condensation (25%) cytosol (25%) "DNA binding (25%) structural constituent of chromatin (25%)" "IPR000119 (33.3%) IPR010992 (33.3%) IPR020816 (33.3%)" "Histone-like DNA-binding protein (33.3%) Integration host factor (IHF)-like DNA-binding domain superfamily (33.3%) Histone-like DNA-binding protein, conserved site (33.3%)" EICGVKLPEGMKENQKFPEPIITPTTK Pseudomonadati Bacteria Pseudomonadati 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (24.9%) GO:0005737 (24.9%) "GO:0004639 (24.9%) GO:0005524 (24.9%) GO:0016874 (0.4%)" 'de novo' IMP biosynthetic process (24.9%) cytoplasm (24.9%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (24.9%) ATP binding (24.9%) ligase activity (0.4%)" "IPR018236 (50%) IPR028923 (50%)" "SAICAR synthetase, conserved site (50%) SAICAR synthetase/ADE2, N-terminal (50%)" ALPLGVVLTLAATGSEMNER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0005829 (20%) "GO:0008106 (20%) GO:0046872 (20%) GO:1990002 (20%)" cytosol (20%) "alcohol dehydrogenase (NADP+) activity (20%) metal ion binding (20%) methylglyoxal reductase (NADPH) (acetol producing) activity (20%)" "IPR001670 (25%) IPR018211 (25%) IPR044731 (25%)" "Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA (25%) Alcohol dehydrogenase, iron-type, conserved site (25%) Butanol dehydrogenase-like (25%)" VMQAQGSQLTNK root 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.2%) GO:0035999 (14.8%) GO:0032259 (11.2%)" "GO:0005829 (15.2%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0004372 (15.2%) GO:0030170 (15.2%) GO:0008168 (11.2%)" "glycine biosynthetic process from serine (15.2%) tetrahydrofolate interconversion (14.8%) methylation (11.2%)" "cytosol (15.2%) cytoplasm (0.1%) membrane (0%)" "glycine hydroxymethyltransferase activity (15.2%) pyridoxal phosphate binding (15.2%) methyltransferase activity (11.2%)" "IPR015421 (14.4%) IPR015424 (14.4%) IPR039429 (14.4%)" "Pyridoxal phosphate-dependent transferase, major domain (14.4%) Pyridoxal phosphate-dependent transferase (14.4%) Serine hydroxymethyltransferase-like domain (14.4%)" FVAEPGDFDVMIGPDSR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.21 (100%) beta-glucosidase (100%) GO:0009251 (32.8%) GO:0042597 (32.8%) "GO:0008422 (32.8%) GO:0016798 (1.6%)" glucan catabolic process (32.8%) periplasmic space (32.8%) "beta-glucosidase activity (32.8%) hydrolase activity, acting on glycosyl bonds (1.6%)" "IPR001764 (12.5%) IPR002772 (12.5%) IPR013783 (12.5%)" "Glycoside hydrolase, family 3, N-terminal (12.5%) Glycoside hydrolase family 3 C-terminal domain (12.5%) Immunoglobulin-like fold (12.5%)" FATPIFDGASMDDLNEWTDKAGLPR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.9%) IPR007121 (7.9%) IPR007645 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) RNA polymerase, beta subunit, conserved site (7.9%) RNA polymerase Rpb2, domain 3 (7.9%)" NQGESLDDQVTYMK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales HLESQLAQADNWTYCADNVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.1 (72.7%) 1.2.7.- (27.3%)" "pyruvate synthase (72.7%) With an iron-sulfur protein as acceptor (27.3%)" "GO:0006979 (15.1%) GO:0022900 (15.1%) GO:0044281 (9.2%)" "GO:0005506 (15.1%) GO:0030976 (15.1%) GO:0051539 (15.1%)" "response to oxidative stress (15.1%) electron transport chain (15.1%) small molecule metabolic process (9.2%)" "iron ion binding (15.1%) thiamine pyrophosphate binding (15.1%) 4 iron, 4 sulfur cluster binding (15.1%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" VRGEEAIISTDDSR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (16.7%) GO:0006085 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0005524 (16.7%) GO:0008776 (16.7%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) ATP binding (16.7%) acetate kinase activity (16.7%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" AKYTNDELLEAFGEMTLVELSEFVK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" ICVQLIAFKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "IPR018598 (25.4%) IPR036781 (25.4%) IPR002625 (24.6%)" "Domain of unknown function DUF2027 (25.4%) Smr-associated-like superfamily (25.4%) Smr domain (24.6%)" NLLAIVHPILR root "GO:0045892 (26.7%) GO:0006097 (19.9%) GO:0006355 (0%)" GO:0005829 (0%) "GO:0003677 (26.7%) GO:0003700 (26.7%)" "negative regulation of DNA-templated transcription (26.7%) glyoxylate cycle (19.9%) regulation of DNA-templated transcription (0%)" cytosol (0%) "DNA binding (26.7%) DNA-binding transcription factor activity (26.7%)" "IPR050707 (16.8%) IPR014757 (16.7%) IPR005471 (16.7%)" "HTH-type Transcriptional Regulators in Metabolic Pathways (16.8%) Transcription regulator IclR, C-terminal (16.7%) Transcription regulator IclR, N-terminal (16.7%)" ALAEHGIVFGEPK root "1.8.1.4 (99.8%) 1.-.-.- (0.1%) 1.8.1.7 (0.1%)" "dihydrolipoyl dehydrogenase (99.8%) Oxidoreductases (0.1%) glutathione-disulfide reductase (0.1%)" "GO:0006103 (20.3%) GO:0006979 (19.2%) GO:0006090 (0%)" "GO:0005737 (19.1%) GO:0005829 (0%) GO:0005886 (0%)" "GO:0004148 (20.4%) GO:0050660 (20.4%) GO:0016491 (0.2%)" "2-oxoglutarate metabolic process (20.3%) response to oxidative stress (19.2%) pyruvate metabolic process (0%)" "cytoplasm (19.1%) cytosol (0%) plasma membrane (0%)" "dihydrolipoyl dehydrogenase (NADH) activity (20.4%) flavin adenine dinucleotide binding (20.4%) oxidoreductase activity (0.2%)" "IPR023753 (12.8%) IPR036188 (12.8%) IPR050151 (12.8%)" "FAD/NAD(P)-binding domain (12.8%) FAD/NAD(P)-binding domain superfamily (12.8%) Class-I pyridine nucleotide-disulfide oxidoreductase (12.8%)" KYDLIDFDLGVK Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.1.1.11 (100%) serine--tRNA ligase (100%) "GO:0006434 (24.9%) GO:0006412 (0.1%)" "GO:0005737 (24.7%) GO:0005829 (0.1%)" "GO:0004828 (24.9%) GO:0005524 (24.9%) GO:0016874 (0.3%)" "seryl-tRNA aminoacylation (24.9%) translation (0.1%)" "cytoplasm (24.7%) cytosol (0.1%)" "serine-tRNA ligase activity (24.9%) ATP binding (24.9%) ligase activity (0.3%)" "IPR045864 (13.7%) IPR002314 (13.6%) IPR002317 (13.6%)" "Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (13.7%) Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (13.6%) Serine-tRNA ligase, type1 (13.6%)" HEEMPAGSYTTSLFESGINK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.5.4.19 (50%) 3.6.1.31 (50%)" "phosphoribosyl-AMP cyclohydrolase (50%) phosphoribosyl-ATP diphosphatase (50%)" GO:0000105 (19.8%) GO:0005737 (19.8%) "GO:0004635 (19.8%) GO:0004636 (19.8%) GO:0005524 (19.8%)" L-histidine biosynthetic process (19.8%) cytoplasm (19.8%) "phosphoribosyl-AMP cyclohydrolase activity (19.8%) phosphoribosyl-ATP diphosphatase activity (19.8%) ATP binding (19.8%)" "IPR002496 (20.2%) IPR008179 (20.2%) IPR021130 (20.2%)" "Phosphoribosyl-AMP cyclohydrolase domain (20.2%) Phosphoribosyl-ATP pyrophosphohydrolase (20.2%) Phosphoribosyl-ATP pyrophosphohydrolase-like (20.2%)" RDPIVEEICEHVHYIK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 4.2.1.32 (100%) L(+)-tartrate dehydratase (100%) "GO:0009408 (0.9%) GO:1901276 (0.9%)" GO:1902494 (0.9%) "GO:0008730 (48.7%) GO:0016836 (44.4%) GO:0016829 (3.4%)" "response to heat (0.9%) tartrate catabolic process (0.9%)" catalytic complex (0.9%) "L(+)-tartrate dehydratase activity (48.7%) hydro-lyase activity (44.4%) lyase activity (3.4%)" "IPR004647 (50%) IPR036660 (50%)" "Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (50%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily (50%)" ALEIKDSNFEELLASGKPVVVDFWATWCGPCKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" EIDGVKCEPIEELTINVPEEYSSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) "GO:0000027 (9.8%) GO:0009409 (9.8%) GO:0010467 (7.9%)" "GO:0005829 (10.3%) GO:1990904 (10.3%)" "GO:0003924 (10.3%) GO:0005525 (10.3%) GO:0000049 (9.8%)" "ribosomal large subunit assembly (9.8%) response to cold (9.8%) gene expression (7.9%)" "cytosol (10.3%) ribonucleoprotein complex (10.3%)" "GTPase activity (10.3%) GTP binding (10.3%) tRNA binding (9.8%)" "IPR000640 (6.9%) IPR035647 (6.9%) IPR035651 (6.9%)" "Elongation factor EFG, domain V-like (6.9%) EF-G domain III/V-like (6.9%) BipA, domain V (6.9%)" DWFDYDAVKDNVTDKNELR root 6.3.5.4 (100%) asparagine synthase (glutamine-hydrolyzing) (100%) "GO:0006529 (24.5%) GO:0070981 (0.3%) GO:0006541 (0.2%)" "GO:0005829 (24.7%) GO:0005737 (0.2%)" "GO:0004066 (24.7%) GO:0005524 (23.9%) GO:0016874 (0.8%)" "obsolete asparagine biosynthetic process (24.5%) L-asparagine biosynthetic process (0.3%) glutamine metabolic process (0.2%)" "cytosol (24.7%) cytoplasm (0.2%)" "asparagine synthase (glutamine-hydrolyzing) activity (24.7%) ATP binding (23.9%) ligase activity (0.8%)" "IPR050795 (14.8%) IPR014729 (14.7%) IPR001962 (14.6%)" "Asparagine Synthetase (14.8%) Rossmann-like alpha/beta/alpha sandwich fold (14.7%) Asparagine synthase (14.6%)" LLVVLPEANKNVYLSAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (19.3%) GO:0003723 (0.7%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (19.3%) RNA binding (0.7%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" NLTDYGAFVDLGGVDGLLHITDMAWKR root "1.3.1.12 (25%) 2.6.1.52 (25%) 2.7.4.25 (25%)" "prephenate dehydrogenase (25%) phosphoserine transaminase (25%) (d)CMP kinase (25%)" "GO:0006412 (24.8%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (24.7%) GO:0005840 (0.3%) GO:1990904 (0.1%)" "GO:0003735 (24.8%) GO:0003729 (24.8%) GO:0016853 (0.1%)" "translation (24.8%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.7%) ribosome (0.3%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.8%) mRNA binding (24.8%) isomerase activity (0.1%)" "IPR003029 (20.1%) IPR012340 (20%) IPR050437 (20%)" "S1 domain (20.1%) Nucleic acid-binding, OB-fold (20%) Small ribosomal subunit protein bS1-like (20%)" FQHPVAGTYKK root IPR025964 (100%) GGGtGRT protein (100%) LAEMFGYVTALR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0032790 (20.3%) GO:0005737 (19.4%) "GO:0003746 (20.4%) GO:0005525 (20.3%) GO:0003924 (19.7%)" ribosome disassembly (20.3%) cytoplasm (19.4%) "translation elongation factor activity (20.4%) GTP binding (20.3%) GTPase activity (19.7%)" "IPR000640 (6.3%) IPR005517 (6.3%) IPR035649 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translation elongation factor EFG/EF2, domain IV (6.3%) EFG, domain V (6.3%)" ISELSEGQIDTLRDEVAK Bacteria Bacteria "GO:0006412 (16.4%) GO:0000028 (0.2%) GO:0002181 (0.2%)" "GO:0005829 (16.2%) GO:0015935 (16.2%) GO:0005840 (1.2%)" "GO:0003735 (16.5%) GO:0019843 (16.4%) GO:0000049 (15.9%)" "translation (16.4%) ribosomal small subunit assembly (0.2%) cytoplasmic translation (0.2%)" "cytosol (16.2%) small ribosomal subunit (16.2%) ribosome (1.2%)" "structural constituent of ribosome (16.5%) rRNA binding (16.4%) tRNA binding (15.9%)" "IPR001892 (20.2%) IPR010979 (20.2%) IPR027437 (20%)" "Small ribosomal subunit protein uS13 (20.2%) Small ribosomal subunit protein uS13-like, H2TH (20.2%) Small ribosomal subunit protein uS13, C-terminal (20%)" FGENSLQANALGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR000531 (12.5%) IPR008969 (12.5%) IPR012910 (12.5%)" "TonB-dependent receptor-like, beta-barrel (12.5%) Carboxypeptidase-like, regulatory domain superfamily (12.5%) TonB-dependent receptor, plug domain (12.5%)" STGHLQTSQVTPEAVEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) GO:0051596 (50%) GO:0016491 (50%) methylglyoxal catabolic process (50%) oxidoreductase activity (50%) "IPR005399 (33.3%) IPR023210 (33.3%) IPR036812 (33.3%)" "Potassium channel, voltage-dependent, beta subunit, KCNAB-related (33.3%) NADP-dependent oxidoreductase domain (33.3%) NAD(P)-dependent oxidoreductase domain superfamily (33.3%)" ANFPLEEHR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.7 (100%) alanine--tRNA ligase (100%) GO:0006419 (14.3%) GO:0005737 (14.3%) "GO:0000049 (14.3%) GO:0002161 (14.3%) GO:0004813 (14.3%)" alanyl-tRNA aminoacylation (14.3%) cytoplasm (14.3%) "tRNA binding (14.3%) aminoacyl-tRNA deacylase activity (14.3%) alanine-tRNA ligase activity (14.3%)" "IPR002318 (9.1%) IPR003156 (9.1%) IPR009000 (9.1%)" "Alanine-tRNA ligase, class IIc (9.1%) DHHA1 domain (9.1%) Translation protein, beta-barrel domain superfamily (9.1%)" SHSESIWVETERPISPEEAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11.1%) GO:0009089 (11.1%) GO:0009097 (11.1%)" "GO:0004073 (11.1%) GO:0046983 (11.1%) GO:0050661 (11.1%)" "threonine biosynthetic process (11.1%) lysine biosynthetic process via diaminopimelate (11.1%) isoleucine biosynthetic process (11.1%)" "aspartate-semialdehyde dehydrogenase activity (11.1%) protein dimerization activity (11.1%) NADP binding (11.1%)" "IPR000319 (16.7%) IPR000534 (16.7%) IPR005986 (16.7%)" "Aspartate-semialdehyde dehydrogenase, conserved site (16.7%) Semialdehyde dehydrogenase, NAD-binding (16.7%) Aspartate-semialdehyde dehydrogenase, beta-type (16.7%)" VFMQPASEGTGIIAGGAMR root "GO:0006412 (16.9%) GO:0042254 (15.8%) GO:0002181 (0.1%)" "GO:0015935 (16.7%) GO:0005737 (16%) GO:0005840 (0.4%)" "GO:0003735 (16.9%) GO:0019843 (16.8%) GO:0003723 (0.1%)" "translation (16.9%) ribosome biogenesis (15.8%) cytoplasmic translation (0.1%)" "small ribosomal subunit (16.7%) cytoplasm (16%) ribosome (0.4%)" "structural constituent of ribosome (16.9%) rRNA binding (16.8%) RNA binding (0.1%)" "IPR005324 (14.3%) IPR014721 (14.3%) IPR020568 (14.3%)" "Small ribosomal subunit protein uS5, C-terminal (14.3%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (14.3%) Ribosomal protein uS5 domain 2-type superfamily (14.3%)" TVVYNVNHDILDGSETVISGASCTTNCLAPMAK Bacteria Bacteria "1.2.1.- (93.8%) 1.2.1.12 (6.3%)" "With NAD(+) or NADP(+) as acceptor (93.8%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (6.3%)" GO:0006006 (25%) "GO:0016620 (25%) GO:0050661 (25%) GO:0051287 (25%)" glucose metabolic process (25%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (25%) NADP binding (25%) NAD binding (25%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" FIVSSTALFSHLQAVSR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006271 (16.7%) "GO:0005737 (16.7%) GO:0009360 (16.7%)" "GO:0003677 (16.7%) GO:0003887 (16.7%) GO:0008408 (16.7%)" DNA strand elongation involved in DNA replication (16.7%) "cytoplasm (16.7%) DNA polymerase III complex (16.7%)" "DNA binding (16.7%) DNA-directed DNA polymerase activity (16.7%) 3'-5' exonuclease activity (16.7%)" "IPR001001 (20%) IPR022634 (20%) IPR022635 (20%)" "DNA polymerase III, beta sliding clamp (20%) DNA polymerase III, beta sliding clamp, N-terminal (20%) DNA polymerase III, beta sliding clamp, C-terminal (20%)" GNGSTEDLTAR root "3.6.4.- (99.9%) 3.6.1.15 (0.1%)" "Acting on ATP; involved in cellular and subcellular movement (99.9%) nucleoside-triphosphate phosphatase (0.1%)" GO:0006353 (14.4%) "GO:0005829 (13.9%) GO:0016020 (0%)" "GO:0003723 (14.4%) GO:0005524 (14.4%) GO:0008186 (14.4%)" DNA-templated transcription termination (14.4%) "cytosol (13.9%) membrane (0%)" "RNA binding (14.4%) ATP binding (14.4%) ATP-dependent activity, acting on RNA (14.4%)" "IPR004665 (10.1%) IPR027417 (10.1%) IPR000194 (10.1%)" "Transcription termination factor Rho (10.1%) P-loop containing nucleoside triphosphate hydrolase (10.1%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.1%)" KMEECKKPIFPILPSIVTAGPEVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005524 (52.9%) GO:0003824 (29.4%) GO:0016874 (17.6%)" "ATP binding (52.9%) catalytic activity (29.4%) ligase activity (17.6%)" "IPR013815 (22%) IPR003781 (19.5%) IPR016102 (19.5%)" "ATP-grasp fold, subdomain 1 (22%) CoA-binding (19.5%) Succinyl-CoA synthetase-like (19.5%)" MFGTDENYDVIINPEKGDFEIWR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae "GO:0006353 (18.7%) GO:0031564 (18.7%)" GO:0005829 (18.7%) "GO:0003700 (18.7%) GO:0003723 (18.7%) GO:0000166 (3.2%)" "DNA-templated transcription termination (18.7%) transcription antitermination (18.7%)" cytosol (18.7%) "DNA-binding transcription factor activity (18.7%) RNA binding (18.7%) nucleotide binding (3.2%)" "IPR009019 (11.9%) IPR010213 (11.9%) IPR012340 (11.9%)" "K homology domain superfamily, prokaryotic type (11.9%) Transcription factor NusA (11.9%) Nucleic acid-binding, OB-fold (11.9%)" LIRDGIVIYAGELGSLKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.3%) IPR000795 (8.3%) IPR004161 (8.3%)" "Translation initiation factor IF-2, bacterial-like (8.3%) Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" NQFQNNPPEVPTENNHVGSYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005990 (25%) GO:0009341 (25%) "GO:0004565 (25%) GO:0030246 (25%)" lactose catabolic process (25%) beta-galactosidase complex (25%) "beta-galactosidase activity (25%) carbohydrate binding (25%)" "IPR004199 (7.1%) IPR006101 (7.1%) IPR006102 (7.1%)" "Beta galactosidase small chain/ domain 5 (7.1%) Glycoside hydrolase, family 2 (7.1%) Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (7.1%)" NNGTKHDFDNDPIETIVDGEWLR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" VLQMSEELDKQAIEVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011659 (50%) IPR011990 (50%)" "WD40-like beta-propeller (50%) Tetratricopeptide-like helical domain superfamily (50%)" SRLTLNYEIIGKSDEEIANLAATDPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" ADFGDLSVVSVYHPSGTSGDER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.1.11.2 (100%) exodeoxyribonuclease III (100%) GO:0006284 (16.7%) "GO:0003677 (16.7%) GO:0003906 (16.7%) GO:0008081 (16.7%)" base-excision repair (16.7%) "DNA binding (16.7%) DNA-(apurinic or apyrimidinic site) endonuclease activity (16.7%) phosphoric diester hydrolase activity (16.7%)" "IPR004808 (24.7%) IPR005135 (24.7%) IPR020847 (24.7%)" "AP endonuclease 1 (24.7%) Endonuclease/exonuclease/phosphatase (24.7%) AP endonuclease 1, binding site (24.7%)" VITINGNDPDEIRK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "2.2.1.1 (95.2%) 2.2.1.- (4.8%)" "transketolase (95.2%) Transketolases and transaldolases (4.8%)" GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" LIAKPNGEDR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006412 (20%) GO:0017148 (20%)" GO:0022625 (20%) "GO:0003729 (20%) GO:0003735 (20%)" "translation (20%) negative regulation of translation (20%)" cytosolic large ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%)" "IPR005822 (25%) IPR005823 (25%) IPR023563 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13, conserved site (25%)" QLPDKAIDLIDEAASSIR root "3.4.21.- (50%) 3.6.1.15 (50%)" "Serine endopeptidases (50%) nucleoside-triphosphate phosphatase (50%)" "GO:0034605 (16.8%) GO:0042026 (15.9%) GO:0006508 (1.1%)" "GO:0005829 (14.5%) GO:0005737 (2.4%) GO:0005759 (0%)" "GO:0005524 (16.9%) GO:0016887 (16.8%) GO:0042802 (14.5%)" "cellular response to heat (16.8%) protein refolding (15.9%) proteolysis (1.1%)" "cytosol (14.5%) cytoplasm (2.4%) mitochondrial matrix (0%)" "ATP binding (16.9%) ATP hydrolysis activity (16.8%) identical protein binding (14.5%)" "IPR041546 (8.5%) IPR050130 (8.5%) IPR027417 (8.5%)" "ClpA/ClpB, AAA lid domain (8.5%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.5%) P-loop containing nucleoside triphosphate hydrolase (8.5%)" ADAEALKKQLEEAGAEVELK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" ENKFWVNVAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.6%) "GO:0005960 (16.6%) GO:0005829 (16.4%)" "GO:0004375 (16.6%) GO:0016594 (16.6%) GO:0030170 (16.6%)" glycine decarboxylation via glycine cleavage system (16.6%) "glycine cleavage complex (16.6%) cytosol (16.4%)" "glycine dehydrogenase (decarboxylating) activity (16.6%) glycine binding (16.6%) pyridoxal phosphate binding (16.6%)" "IPR015422 (14.5%) IPR020581 (14.5%) IPR049316 (14.5%)" "Pyridoxal phosphate-dependent transferase, small domain (14.5%) Glycine cleavage system P protein (14.5%) Glycine dehydrogenase, C-terminal domain (14.5%)" MIGQGMHGFVGNDDVHFEDLDKELSHPTDLR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006221 (13.2%) GO:0006526 (13.2%) GO:0006541 (13.2%)" GO:0005737 (13.2%) "GO:0004088 (13.2%) GO:0005524 (13.2%) GO:0046872 (13.2%)" "pyrimidine nucleotide biosynthetic process (13.2%) L-arginine biosynthetic process (13.2%) glutamine metabolic process (13.2%)" cytoplasm (13.2%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.2%) ATP binding (13.2%) metal ion binding (13.2%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" DYVSVSEFEGKPILK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (19.7%) "GO:0046872 (20.3%) GO:0051539 (20.3%) GO:0004333 (19.7%)" tricarboxylic acid cycle (19.7%) "metal ion binding (20.3%) 4 iron, 4 sulfur cluster binding (20.3%) fumarate hydratase activity (19.7%)" "IPR004646 (17%) IPR051208 (17%) IPR004647 (16.6%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (17%) Class-I Fumarase/Tartrate Dehydratase (17%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.6%)" FLGEAVANPVRPFTAILGGAK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (25%) IPR015824 (25%) IPR015911 (25%)" "Phosphoglycerate kinase (25%) Phosphoglycerate kinase, N-terminal (25%) Phosphoglycerate kinase, conserved site (25%)" NRLGAQLLGNLYVYAGSEHKHEAQTPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0006412 (20%) GO:0017148 (20%)" GO:0022625 (20%) "GO:0003729 (20%) GO:0003735 (20%)" "translation (20%) negative regulation of translation (20%)" cytosolic large ribosomal subunit (20%) "mRNA binding (20%) structural constituent of ribosome (20%)" "IPR005822 (25%) IPR005823 (25%) IPR023563 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13, conserved site (25%)" RVVFSNLQDKFAVTELFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR000456 (33.6%) IPR036373 (33.6%) IPR047859 (32.8%)" "Large ribosomal subunit protein bL17 (33.6%) Large ribosomal subunit protein bL17 superfamily (33.6%) Large ribosomal subunit protein bL17, conserved site (32.8%)" VVVDSGDSQNLQPGQIVTAR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (17.2%) GO:0000428 (17.2%) "GO:0003677 (17.2%) GO:0003899 (17.2%) GO:0000287 (15.5%)" DNA-templated transcription (17.2%) DNA-directed RNA polymerase complex (17.2%) "DNA binding (17.2%) DNA-directed RNA polymerase activity (17.2%) magnesium ion binding (15.5%)" "IPR007081 (9.9%) IPR045867 (9.9%) IPR000722 (8.9%)" "RNA polymerase Rpb1, domain 5 (9.9%) DNA-directed RNA polymerase, subunit beta-prime (9.9%) RNA polymerase, alpha subunit (8.9%)" TTQLYPNDFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" GYQLGATEYVTKPFQR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.13.3 (100%) histidine kinase (100%) GO:0000155 (100%) phosphorelay sensor kinase activity (100%) "IPR001789 (14.4%) IPR003594 (14.4%) IPR004358 (14.4%)" "Signal transduction response regulator, receiver domain (14.4%) Histidine kinase/HSP90-like ATPase domain (14.4%) Signal transduction histidine kinase-related protein, C-terminal (14.4%)" LGSNFTNPVALIDQLYANGAAAVVLFNR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.3.1.1 (95%) 1.3.98.1 (5%)" "dihydrouracil dehydrogenase (NAD(+)) (95%) dihydroorotate oxidase (fumarate) (5%)" "GO:0006210 (13.5%) GO:0006212 (13.5%) GO:0044205 (12%)" GO:0005737 (14.3%) "GO:0002058 (13.5%) GO:0004152 (13.5%) GO:0050661 (13.5%)" "thymine catabolic process (13.5%) uracil catabolic process (13.5%) 'de novo' UMP biosynthetic process (12%)" cytoplasm (14.3%) "uracil binding (13.5%) dihydroorotate dehydrogenase activity (13.5%) NADP binding (13.5%)" "IPR005720 (32.8%) IPR012135 (32.8%) IPR013785 (32.8%)" "Dihydroorotate dehydrogenase, catalytic (32.8%) Dihydroorotate dehydrogenase, class 1/ 2 (32.8%) Aldolase-type TIM barrel (32.8%)" FKAEVYILK root "3.6.5.3 (99.8%) 2.7.7.6 (0.2%)" "protein-synthesizing GTPase (99.8%) DNA-directed RNA polymerase (0.2%)" "GO:0032790 (0%) GO:0070125 (0%) GO:0006351 (0%)" "GO:0005829 (15.7%) GO:0032045 (11%) GO:0005737 (0.2%)" "GO:0003746 (16%) GO:0005525 (16%) GO:0003924 (15.4%)" "ribosome disassembly (0%) mitochondrial translational elongation (0%) DNA-templated transcription (0%)" "cytosol (15.7%) guanyl-nucleotide exchange factor complex (11%) cytoplasm (0.2%)" "translation elongation factor activity (16%) GTP binding (16%) GTPase activity (15.4%)" "IPR004160 (8.5%) IPR009001 (8.5%) IPR050055 (8.5%)" "Translation elongation factor EFTu/EF1A, C-terminal (8.5%) Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (8.5%) Elongation factor Tu GTPase (8.5%)" VALKYDSVNKVNAIKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (17.6%) "GO:0005840 (17.3%) GO:1990904 (17.3%) GO:0005737 (16.3%)" "GO:0003735 (17.6%) GO:0019843 (13.6%)" translation (17.6%) "ribosome (17.3%) ribonucleoprotein complex (17.3%) cytoplasm (16.3%)" "structural constituent of ribosome (17.6%) rRNA binding (13.6%)" "IPR000630 (34.9%) IPR035987 (34.9%) IPR047863 (30.1%)" "Small ribosomal subunit protein uS8 (34.9%) Small ribosomal subunit protein uS8 superfamily (34.9%) Small ribosomal subunit protein uS8, conserved site (30.1%)" GDVQREFQEHAAEEYNHAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006879 (20%) GO:0005829 (20%) "GO:0004322 (20%) GO:0008199 (20%) GO:0020037 (20%)" intracellular iron ion homeostasis (20%) cytosol (20%) "ferroxidase activity (20%) ferric iron binding (20%) heme binding (20%)" "IPR008331 (17.3%) IPR009078 (17.3%) IPR012347 (17.3%)" "Ferritin/DPS domain (17.3%) Ferritin-like superfamily (17.3%) Ferritin-like (17.3%)" VGDEAEFQGHMLEVTLGPGMLSR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) GO:0042777 (23.8%) "GO:0005524 (23.8%) GO:0046933 (23.8%) GO:0046961 (23.8%)" proton motive force-driven plasma membrane ATP synthesis (23.8%) "ATP binding (23.8%) proton-transporting ATP synthase activity, rotational mechanism (23.8%) proton-transporting ATPase activity, rotational mechanism (23.8%)" "IPR000194 (14.3%) IPR004100 (14.3%) IPR020003 (14.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (14.3%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (14.3%)" IVELELNADEKAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25.3%) GO:0006099 (25.3%)" "GO:0004459 (25.3%) GO:0030060 (24.1%)" "lactate metabolic process (25.3%) tricarboxylic acid cycle (25.3%)" "L-lactate dehydrogenase (NAD+) activity (25.3%) L-malate dehydrogenase (NAD+) activity (24.1%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR011275 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 3 (16.7%)" WKQEPMEVGPLAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.12.99.6 (100%) hydrogenase (acceptor) (100%) GO:0030313 (32%) "GO:0008901 (32%) GO:0016151 (32%) GO:0033748 (4%)" cell envelope (32%) "ferredoxin hydrogenase activity (32%) nickel cation binding (32%) hydrogenase (acceptor) activity (4%)" "IPR001501 (25%) IPR018194 (25%) IPR029014 (25%)" "Nickel-dependent hydrogenase, large subunit (25%) Nickel-dependent hydrogenase, large subunit, nickel binding site (25%) [NiFe]-hydrogenase, large subunit (25%)" FYEAAKPYYEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" VNCDSMQAR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.7.2.11 (100%) glutamate 5-kinase (100%) GO:0055129 (20%) GO:0005829 (20%) "GO:0003723 (20%) GO:0004349 (20%) GO:0005524 (20%)" L-proline biosynthetic process (20%) cytosol (20%) "RNA binding (20%) glutamate 5-kinase activity (20%) ATP binding (20%)" "IPR001048 (10%) IPR001057 (10%) IPR002478 (10%)" "Aspartate/glutamate/uridylate kinase (10%) Glutamate/acetylglutamate kinase (10%) PUA domain (10%)" LLKDDPGIEIINIHGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (16.7%) IPR001867 (16.7%) IPR011006 (16.7%)" "Signal transduction response regulator, receiver domain (16.7%) OmpR/PhoB-type DNA-binding domain (16.7%) CheY-like superfamily (16.7%)" TVVADGVGQGYKEVQEISPNLR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria IPR020911 (100%) Uncharacterised protein family UPF0325 (100%) SFDWPVIIR Bacteria Bacteria 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0006177 (0.3%) GO:0005829 (32.5%) "GO:0003921 (32.5%) GO:0005524 (32.5%) GO:0016740 (1.9%)" GMP biosynthetic process (0.3%) cytosol (32.5%) "GMP synthase activity (32.5%) ATP binding (32.5%) transferase activity (1.9%)" "IPR001674 (17.2%) IPR025777 (17.1%) IPR014729 (16.9%)" "GMP synthase, C-terminal (17.2%) GMP synthetase ATP pyrophosphatase domain (17.1%) Rossmann-like alpha/beta/alpha sandwich fold (16.9%)" TILWNGPTGVFEFENFTHGSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.6%) GO:0006096 (16.6%)" GO:0005829 (16.6%) "GO:0004618 (16.6%) GO:0005524 (16.6%) GO:0043531 (16.6%)" "gluconeogenesis (16.6%) glycolytic process (16.6%)" cytosol (16.6%) "phosphoglycerate kinase activity (16.6%) ATP binding (16.6%) ADP binding (16.6%)" "IPR001576 (33%) IPR015824 (33%) IPR036043 (33%)" "Phosphoglycerate kinase (33%) Phosphoglycerate kinase, N-terminal (33%) Phosphoglycerate kinase superfamily (33%)" MQTQMQTQQIQQK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae IPR020158 (100%) Protein of unknown function DUF2756 (100%) EKPWGTNHAVLMGKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016740 (100%) transferase activity (100%) IPR029044 (100%) Nucleotide-diphospho-sugar transferases (100%) GAIAKAEELRDATPGSIILQQFENPANPAVHIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.5.1.47 (100%) cysteine synthase (100%) GO:0006535 (50%) GO:0004124 (50%) cysteine biosynthetic process from serine (50%) cysteine synthase activity (50%) "IPR001216 (16.7%) IPR001926 (16.7%) IPR005856 (16.7%)" "Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site (16.7%) Tryptophan synthase beta chain-like, PALP domain (16.7%) Cysteine synthase (16.7%)" EVDKPFLMPVEDVFSITGR Bacteria Bacteria 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0005829 (15.5%) GO:0032045 (10.7%) GO:0005737 (0.3%)" "GO:0003746 (15.7%) GO:0003924 (15.7%) GO:0005525 (15.7%)" "cytosol (15.5%) guanyl-nucleotide exchange factor complex (10.7%) cytoplasm (0.3%)" "translation elongation factor activity (15.7%) GTPase activity (15.7%) GTP binding (15.7%)" "IPR000795 (8.4%) IPR004160 (8.4%) IPR004161 (8.4%)" "Translational (tr)-type GTP-binding domain (8.4%) Translation elongation factor EFTu/EF1A, C-terminal (8.4%) Translation elongation factor EFTu-like, domain 2 (8.4%)" GYDADNERVVGDVGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (17%) IPR006099 (17%) IPR016176 (17%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (17%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (17%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (17%)" TKPIVFSGAQPSGELTIGNYMGALR Pseudomonadati Bacteria Pseudomonadati "6.1.1.2 (99.9%) 3.1.3.18 (0.1%)" "tryptophan--tRNA ligase (99.9%) phosphoglycolate phosphatase (0.1%)" "GO:0006436 (24.8%) GO:0005975 (0%) GO:0006418 (0%)" "GO:0005829 (24.8%) GO:0005739 (0%)" "GO:0004830 (24.9%) GO:0005524 (24.9%) GO:0016874 (0.4%)" "tryptophanyl-tRNA aminoacylation (24.8%) carbohydrate metabolic process (0%) tRNA aminoacylation for protein translation (0%)" "cytosol (24.8%) mitochondrion (0%)" "tryptophan-tRNA ligase activity (24.9%) ATP binding (24.9%) ligase activity (0.4%)" "IPR001412 (16.8%) IPR002305 (16.8%) IPR014729 (16.8%)" "Aminoacyl-tRNA synthetase, class I, conserved site (16.8%) Aminoacyl-tRNA synthetase, class Ic (16.8%) Rossmann-like alpha/beta/alpha sandwich fold (16.8%)" VKKHESGVVTDPQTVLPTTTLR root 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006183 (20.9%) GO:0006177 (18.5%) GO:0009411 (0.1%)" "GO:0005737 (0.2%) GO:0005829 (0.1%) GO:0005886 (0.1%)" "GO:0003938 (20.9%) GO:0046872 (19.8%) GO:0000166 (17.6%)" "GTP biosynthetic process (20.9%) GMP biosynthetic process (18.5%) response to UV (0.1%)" "cytoplasm (0.2%) cytosol (0.1%) plasma membrane (0.1%)" "IMP dehydrogenase activity (20.9%) metal ion binding (19.8%) nucleotide binding (17.6%)" "IPR001093 (17.1%) IPR005990 (17.1%) IPR013785 (17.1%)" "IMP dehydrogenase/GMP reductase (17.1%) Inosine-5'-monophosphate dehydrogenase (17.1%) Aldolase-type TIM barrel (17.1%)" TPLPGVILQVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.1.1.70 (100%) Transferred entry: 7.2.4.5 (100%) GO:0016829 (100%) lyase activity (100%) "IPR000089 (25%) IPR001882 (25%) IPR011053 (25%)" "Biotin/lipoyl attachment (25%) Biotin-binding site (25%) Single hybrid motif (25%)" NQQLDDHYFGAIPSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (50%) GO:0004356 (50%) glutamine biosynthetic process (50%) glutamine synthetase activity (50%) "IPR008146 (14.3%) IPR008147 (14.3%) IPR014746 (14.3%)" "Glutamine synthetase, catalytic domain (14.3%) Glutamine synthetase, N-terminal domain (14.3%) Glutamine synthetase/guanido kinase, catalytic domain (14.3%)" VGRNDPCPCGSGK root "7.4.2.8 (99.9%) 3.4.11.18 (0.1%) 1.1.99.- (0%)" "protein-secreting ATPase (99.9%) methionyl aminopeptidase (0.1%) With other acceptors (0%)" "GO:0017038 (11%) GO:0006605 (11%) GO:0043952 (11%)" "GO:0005886 (11%) GO:0031522 (11%) GO:0005829 (11%)" "GO:0046872 (11%) GO:0005524 (11%) GO:0008564 (0.4%)" "protein import (11%) protein targeting (11%) protein transport by the Sec complex (11%)" "plasma membrane (11%) cell envelope Sec protein transport complex (11%) cytosol (11%)" "metal ion binding (11%) ATP binding (11%) protein-exporting ATPase activity (0.4%)" "IPR004027 (10.5%) IPR011116 (7.3%) IPR036266 (7.3%)" "SEC-C motif (10.5%) SecA Wing/Scaffold (7.3%) SecA, Wing/Scaffold superfamily (7.3%)" AKHDLHLTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0032790 (20.1%) GO:0006412 (0.4%)" GO:0005737 (19.1%) "GO:0003746 (20.1%) GO:0003924 (20.1%) GO:0005525 (20.1%)" "ribosome disassembly (20.1%) translation (0.4%)" cytoplasm (19.1%) "translation elongation factor activity (20.1%) GTPase activity (20.1%) GTP binding (20.1%)" "IPR000795 (6.4%) IPR027417 (6.4%) IPR031157 (6.4%)" "Translational (tr)-type GTP-binding domain (6.4%) P-loop containing nucleoside triphosphate hydrolase (6.4%) Tr-type G domain, conserved site (6.4%)" QINEAENRVDLQSGSIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae YTVTLPDGTKVEELNK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales GO:0006950 (100%) response to stress (100%) "IPR025543 (20.1%) IPR051096 (20.1%) IPR036275 (20%)" "Dodecin-like (20.1%) BhsA/McbA stress and biofilm-associated protein (20.1%) YdgH-like superfamily (20%)" HLNIEQPQVGESWEISNVPGDESVVANGTQAGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (28.6%) "GO:0004476 (35.7%) GO:0008270 (35.7%)" carbohydrate metabolic process (28.6%) "mannose-6-phosphate isomerase activity (35.7%) zinc ion binding (35.7%)" "IPR011051 (18.5%) IPR014710 (18.5%) IPR046457 (18.5%)" "RmlC-like cupin domain superfamily (18.5%) RmlC-like jelly roll fold (18.5%) Phosphomannose isomerase type I, catalytic domain (18.5%)" ASYVLNSSELHAPLQK root "3.4.16.4 (98.2%) 3.5.2.6 (1.8%)" "serine-type D-Ala-D-Ala carboxypeptidase (98.2%) beta-lactamase (1.8%)" "GO:0006508 (12.5%) GO:0008360 (10.7%) GO:0071555 (10.7%)" "GO:0005886 (11.6%) GO:0030288 (10.1%)" "GO:0009002 (12.5%) GO:0008658 (10.1%) GO:0042803 (10.1%)" "proteolysis (12.5%) regulation of cell shape (10.7%) cell wall organization (10.7%)" "plasma membrane (11.6%) outer membrane-bounded periplasmic space (10.1%)" "serine-type D-Ala-D-Ala carboxypeptidase activity (12.5%) penicillin binding (10.1%) protein homodimerization activity (10.1%)" "IPR012907 (17.6%) IPR037167 (17.6%) IPR001967 (16.5%)" "Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal (17.6%) D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily (17.6%) Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal (16.5%)" DVFVHFSAIQGNGFK root "GO:0010468 (0.7%) GO:0051252 (0.5%) GO:0000917 (0.1%)" "GO:0005829 (47.6%) GO:0005737 (1.2%) GO:0005886 (0.1%)" "GO:0003677 (24.5%) GO:0003676 (24.4%) GO:0001072 (0.1%)" "regulation of gene expression (0.7%) regulation of RNA metabolic process (0.5%) division septum assembly (0.1%)" "cytosol (47.6%) cytoplasm (1.2%) plasma membrane (0.1%)" "DNA binding (24.5%) nucleic acid binding (24.4%) transcription antitermination factor activity, RNA binding (0.1%)" "IPR002059 (16.7%) IPR011129 (16.7%) IPR012340 (16.7%)" "Cold-shock protein Csp, DNA-binding (16.7%) Cold-shock domain (16.7%) Nucleic acid-binding, OB-fold (16.7%)" RLPILEAIKEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.6%) GO:0005829 (16.6%) "GO:0000049 (16.6%) GO:0004824 (16.6%) GO:0005524 (16.6%)" lysyl-tRNA aminoacylation (16.6%) cytosol (16.6%) "tRNA binding (16.6%) lysine-tRNA ligase activity (16.6%) ATP binding (16.6%)" "IPR004364 (11.9%) IPR006195 (11.9%) IPR018149 (11.9%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (11.9%) Aminoacyl-tRNA synthetase, class II (11.9%) Lysyl-tRNA synthetase, class II, C-terminal (11.9%)" LRPGEPPTVESASSLINALFFDAK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.7%) IPR007121 (7.7%) IPR007641 (7.7%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.7%) RNA polymerase, beta subunit, conserved site (7.7%) RNA polymerase Rpb2, domain 7 (7.7%)" AKIEYGEAAFYGPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.5%) GO:0005737 (16.5%) "GO:0000049 (16.5%) GO:0004829 (16.5%) GO:0005524 (16.5%)" threonyl-tRNA aminoacylation (16.5%) cytoplasm (16.5%) "tRNA binding (16.5%) threonine-tRNA ligase activity (16.5%) ATP binding (16.5%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004154 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) Anticodon-binding (7.7%)" MVHNDSHKFESNFVSLEIPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.4%) GO:0006164 (1.1%)" GO:0005737 (20.4%) "GO:0004642 (20.4%) GO:0005524 (19.4%) GO:0046872 (19.4%)" "'de novo' IMP biosynthetic process (19.4%) purine nucleotide biosynthetic process (1.1%)" cytoplasm (20.4%) "phosphoribosylformylglycinamidine synthase activity (20.4%) ATP binding (19.4%) metal ion binding (19.4%)" "IPR029062 (11.6%) IPR036676 (11.6%) IPR010073 (11%)" "Class I glutamine amidotransferase-like (11.6%) PurM-like, C-terminal domain superfamily (11.6%) Phosphoribosylformylglycinamidine synthase PurL (11%)" ALWPEQTATTGDYR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.5.2.17 (100%) hydroxyisourate hydrolase (100%) "GO:0006144 (33.8%) GO:0051289 (0.3%)" "GO:0042597 (31.8%) GO:0032991 (0.3%)" "GO:0033971 (32.8%) GO:0016787 (0.7%) GO:0042802 (0.3%)" "purine nucleobase metabolic process (33.8%) protein homotetramerization (0.3%)" "periplasmic space (31.8%) protein-containing complex (0.3%)" "hydroxyisourate hydrolase activity (32.8%) hydrolase activity (0.7%) identical protein binding (0.3%)" "IPR023416 (17.1%) IPR036817 (17.1%) IPR000895 (17%)" "Transthyretin/hydroxyisourate hydrolase domain (17.1%) Transthyretin/hydroxyisourate hydrolase domain superfamily (17.1%) Transthyretin/hydroxyisourate hydrolase (17%)" VWANPDYANNELGWK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR005886 (33.3%) IPR036291 (33.3%) IPR001509 (28.9%)" "UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD-dependent epimerase/dehydratase (28.9%)" IVTAPTCGSCGVMPAVLYHLAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.17 (100%) L-serine ammonia-lyase (100%) GO:0006094 (25%) "GO:0003941 (25%) GO:0046872 (25%) GO:0051539 (25%)" gluconeogenesis (25%) "L-serine ammonia-lyase activity (25%) metal ion binding (25%) 4 iron, 4 sulfur cluster binding (25%)" "IPR004644 (20%) IPR005130 (20%) IPR005131 (20%)" "Iron-sulphur-dependent L-serine dehydratase single chain form (20%) Serine dehydratase-like, alpha subunit (20%) Serine dehydratase beta chain (20%)" LNAQVIPADATSVEDLETVFAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" DAMTHPDGMQIK root "GO:0045893 (14%) GO:0006351 (0%) GO:0045892 (0%)" "GO:0005829 (19.2%) GO:0032993 (14%)" "GO:0003700 (19.2%) GO:0030552 (14.1%) GO:0043565 (13.9%)" "positive regulation of DNA-templated transcription (14%) DNA-templated transcription (0%) negative regulation of DNA-templated transcription (0%)" "cytosol (19.2%) protein-DNA complex (14%)" "DNA-binding transcription factor activity (19.2%) cAMP binding (14.1%) sequence-specific DNA binding (13.9%)" "IPR036388 (11.2%) IPR012318 (11.2%) IPR036390 (11.1%)" "Winged helix-like DNA-binding domain superfamily (11.2%) Crp-type HTH domain (11.2%) Winged helix DNA-binding domain superfamily (11.1%)" SISLTPLEDKIIVK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0051085 (0.5%) GO:0005737 (16.6%) "GO:0005524 (16.6%) GO:0044183 (16.6%) GO:0046872 (16.6%)" obsolete chaperone cofactor-dependent protein refolding (0.5%) cytoplasm (16.6%) "ATP binding (16.6%) protein folding chaperone (16.6%) metal ion binding (16.6%)" "IPR011032 (25%) IPR018369 (25%) IPR020818 (25%)" "GroES-like superfamily (25%) Chaperonin GroES, conserved site (25%) GroES chaperonin family (25%)" DVAQEAYNLYKDNTDGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.1.2 (100%) glutaminase (100%) "GO:0006537 (33.3%) GO:0006543 (33.3%)" GO:0004359 (33.3%) "glutamate biosynthetic process (33.3%) L-glutamine catabolic process (33.3%)" glutaminase activity (33.3%) "IPR012338 (50%) IPR015868 (50%)" "Beta-lactamase/transpeptidase-like (50%) Glutaminase (50%)" MELSVFNIKGEDTGR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" GVEIVEVEGPHPAANVGVQINHIKPVNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (20%) IPR011053 (20%) IPR022615 (20%)" "Na(+)-translocating NADH-quinone reductase subunit A (20%) Single hybrid motif (20%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (20%)" NKTLGNFQLTDIPPAPR Lactobacillaceae Bacteria Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae GO:0005737 (6.5%) "GO:0005524 (33.3%) GO:0140662 (33.3%) GO:0051082 (25.8%)" cytoplasm (6.5%) "ATP binding (33.3%) ATP-dependent protein folding chaperone (33.3%) unfolded protein binding (25.8%)" "IPR013126 (18.1%) IPR029047 (18.1%) IPR043129 (18.1%)" "Heat shock protein 70 family (18.1%) Heat shock protein 70kD, peptide-binding domain superfamily (18.1%) ATPase, nucleotide binding domain (18.1%)" SVMTLFSGPTDIYSHQVR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006950 (0.2%) GO:0042594 (0.2%) GO:0045893 (0.2%)" "GO:0005737 (98%) GO:0005829 (0.2%)" "GO:0004364 (0.5%) GO:0016740 (0.5%) GO:0016853 (0.2%)" "response to stress (0.2%) response to starvation (0.2%) positive regulation of DNA-templated transcription (0.2%)" "cytoplasm (98%) cytosol (0.2%)" "glutathione transferase activity (0.5%) transferase activity (0.5%) isomerase activity (0.2%)" "IPR004045 (11.3%) IPR036249 (11.3%) IPR034341 (11.2%)" "Glutathione S-transferase, N-terminal (11.3%) Thioredoxin-like superfamily (11.3%) Stringent starvation protein A, N-terminal (11.2%)" MLNANDLEQLKAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016301 (100%) kinase activity (100%) "IPR025393 (50%) IPR029044 (50%)" "Domain of unknown function DUF4301 (50%) Nucleotide-diphospho-sugar transferases (50%)" QVGVPYIIVFLNK root "3.6.5.3 (99.9%) 2.7.1.25 (0.1%)" "protein-synthesizing GTPase (99.9%) adenylyl-sulfate kinase (0.1%)" "GO:0006414 (0%) GO:0046677 (0%)" "GO:0005829 (15.5%) GO:0032045 (9.9%) GO:0005737 (1.4%)" "GO:0003746 (17.2%) GO:0003924 (17.1%) GO:0005525 (17.1%)" "translational elongation (0%) response to antibiotic (0%)" "cytosol (15.5%) guanyl-nucleotide exchange factor complex (9.9%) cytoplasm (1.4%)" "translation elongation factor activity (17.2%) GTPase activity (17.1%) GTP binding (17.1%)" "IPR000795 (10.2%) IPR050055 (10.2%) IPR027417 (10.2%)" "Translational (tr)-type GTP-binding domain (10.2%) Elongation factor Tu GTPase (10.2%) P-loop containing nucleoside triphosphate hydrolase (10.2%)" YTSTAGSQEASSSNNR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005615 (50%) GO:0031012 (50%)" "extracellular space (50%) extracellular matrix (50%)" IPR050149 (100%) Collagen superfamily (100%) TVGEAIVEATK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" WEDEEGKHAFWHSSAHLMAEALQELYPGIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.3 (100%) threonine--tRNA ligase (100%) GO:0006435 (16.5%) GO:0005737 (16.5%) "GO:0000049 (16.5%) GO:0004829 (16.5%) GO:0005524 (16.5%)" threonyl-tRNA aminoacylation (16.5%) cytoplasm (16.5%) "tRNA binding (16.5%) threonine-tRNA ligase activity (16.5%) ATP binding (16.5%)" "IPR002314 (7.7%) IPR002320 (7.7%) IPR004095 (7.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (7.7%) Threonine-tRNA ligase, class IIa (7.7%) TGS (7.7%)" QMDECEAGDNTGLLLR Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (19.6%) "GO:0003746 (19.6%) GO:0003924 (19.6%) GO:0005525 (19.6%)" cytosol (19.6%) "translation elongation factor activity (19.6%) GTPase activity (19.6%) GTP binding (19.6%)" "IPR000795 (9.4%) IPR004161 (9.4%) IPR009000 (9.4%)" "Translational (tr)-type GTP-binding domain (9.4%) Translation elongation factor EFTu-like, domain 2 (9.4%) Translation protein, beta-barrel domain superfamily (9.4%)" GMVHTMMPGTEELLAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (17.1%) GO:0005829 (17.1%) "GO:0004831 (17.1%) GO:0005524 (17.1%) GO:0003723 (16.4%)" tyrosyl-tRNA aminoacylation (17.1%) cytosol (17.1%) "tyrosine-tRNA ligase activity (17.1%) ATP binding (17.1%) RNA binding (16.4%)" "IPR001412 (13%) IPR002305 (13%) IPR002307 (13%)" "Aminoacyl-tRNA synthetase, class I, conserved site (13%) Aminoacyl-tRNA synthetase, class Ic (13%) Tyrosine-tRNA ligase (13%)" YMPTDEELNPNTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006353 (25%) GO:0031564 (25%)" GO:0005829 (25%) GO:0003723 (25%) "DNA-templated transcription termination (25%) transcription antitermination (25%)" cytosol (25%) RNA binding (25%) "IPR006027 (33.3%) IPR011605 (33.3%) IPR035926 (33.3%)" "NusB/RsmB/TIM44 (33.3%) NusB antitermination factor (33.3%) NusB-like superfamily (33.3%)" ETDAELVMASDPDADRVGAAVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (24.3%) GO:0006166 (24.3%)" "GO:0000287 (24.3%) GO:0008973 (24.3%) GO:0004614 (2.9%)" "carbohydrate metabolic process (24.3%) purine ribonucleoside salvage (24.3%)" "magnesium ion binding (24.3%) phosphopentomutase activity (24.3%) phosphoglucomutase activity (2.9%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" EVEVHWYDGGMMPDRPEGFPQGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (92.3%) GO:0050112 (7.7%)" "nucleotide binding (92.3%) inositol 2-dehydrogenase (NAD+) activity (7.7%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" SLSETYCIIDEAQNLTPHEIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (24.8%) IPR003714 (24.8%) IPR027417 (24.8%)" "PIN domain (24.8%) PhoH-like protein (24.8%) P-loop containing nucleoside triphosphate hydrolase (24.8%)" TQERDPANLKWNEVGAEVVIESTGLFLTDETAR Comamonas Bacteria Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Comamonas 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0016620 (16.7%) GO:0050661 (16.7%) GO:0051287 (16.7%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (16.7%) NADP binding (16.7%) NAD binding (16.7%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" EGLDISEFDFKDIIRPNECFILK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" GFLEVETPMLVGSTPEGAR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.12 (100%) aspartate--tRNA ligase (100%) "GO:0006422 (19.6%) GO:0006430 (1.1%)" GO:0005737 (19.6%) "GO:0003676 (19.6%) GO:0004815 (19.6%) GO:0005524 (19.6%)" "aspartyl-tRNA aminoacylation (19.6%) lysyl-tRNA aminoacylation (1.1%)" cytoplasm (19.6%) "nucleic acid binding (19.6%) aspartate-tRNA ligase activity (19.6%) ATP binding (19.6%)" "IPR004115 (9.2%) IPR004364 (9.2%) IPR004365 (9.2%)" "GAD-like domain superfamily (9.2%) Aminoacyl-tRNA synthetase, class II (D/K/N) (9.2%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (9.2%)" VGLFHFVAEPYLMDFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0000036 (50%) GO:0016297 (50%)" "acyl carrier activity (50%) fatty acyl-[ACP] hydrolase activity (50%)" "IPR002864 (25%) IPR029069 (25%) IPR045023 (25%)" "Acyl-ACP thioesterase, N-terminal hotdog domain (25%) HotDog domain superfamily (25%) Acyl-[acyl-carrier-protein] hydrolase FATA/B (25%)" QVDPSVAEEANTLISSYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (44%) IPR019734 (44%) IPR013105 (12%)" "Tetratricopeptide-like helical domain superfamily (44%) Tetratricopeptide repeat (44%) Tetratricopeptide repeat 2 (12%)" ILSDPEASENDKYVALTFLR Pseudomonadati Bacteria Pseudomonadati 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (19.5%) GO:0005829 (0.3%) "GO:0004333 (20.3%) GO:0046872 (20.3%) GO:0051539 (20.3%)" tricarboxylic acid cycle (19.5%) cytosol (0.3%) "fumarate hydratase activity (20.3%) metal ion binding (20.3%) 4 iron, 4 sulfur cluster binding (20.3%)" "IPR004646 (17.2%) IPR051208 (17.2%) IPR004647 (16.5%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (17.2%) Class-I Fumarase/Tartrate Dehydratase (17.2%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.5%)" VSLLFPWHTLER Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 1.4.3.5 (100%) pyridoxal 5'-phosphate synthase (100%) "GO:0008615 (32.3%) GO:0036001 (0.2%) GO:0042823 (0.2%)" "GO:0005829 (0.2%) GO:0032991 (0.2%)" "GO:0004733 (32.3%) GO:0010181 (32.3%) GO:0016491 (1.2%)" "pyridoxine biosynthetic process (32.3%) 'de novo' pyridoxal 5'-phosphate biosynthetic process (0.2%) pyridoxal phosphate biosynthetic process (0.2%)" "cytosol (0.2%) protein-containing complex (0.2%)" "pyridoxamine phosphate oxidase activity (32.3%) FMN binding (32.3%) oxidoreductase activity (1.2%)" "IPR000659 (20.6%) IPR011576 (20.6%) IPR012349 (20.6%)" "Pyridoxamine 5'-phosphate oxidase (20.6%) Pyridoxamine 5'-phosphate oxidase, N-terminal (20.6%) FMN-binding split barrel (20.6%)" DGIWIEKLDSNPGSLIPAELR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (19.8%) GO:0005829 (0.9%) "GO:0004333 (19.8%) GO:0042803 (19.8%) GO:0046872 (19.8%)" tricarboxylic acid cycle (19.8%) cytosol (0.9%) "fumarate hydratase activity (19.8%) protein homodimerization activity (19.8%) metal ion binding (19.8%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" YDMDLVVCGHHQDFWSK root GO:0006950 (0.4%) "GO:0005737 (99.1%) GO:0016020 (0.2%)" "GO:0042802 (0.2%) GO:0042803 (0.2%)" response to stress (0.4%) "cytoplasm (99.1%) membrane (0.2%)" "identical protein binding (0.2%) protein homodimerization activity (0.2%)" "IPR006016 (33.7%) IPR014729 (33.7%) IPR006015 (32.7%)" "UspA (33.7%) Rossmann-like alpha/beta/alpha sandwich fold (33.7%) Universal stress protein A family (32.7%)" ALKVPVGKDQEQNMEMARR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.2 (100%) tryptophan--tRNA ligase (100%) GO:0006436 (25%) GO:0005829 (25%) "GO:0004830 (25%) GO:0005524 (25%)" tryptophanyl-tRNA aminoacylation (25%) cytosol (25%) "tryptophan-tRNA ligase activity (25%) ATP binding (25%)" "IPR002305 (17.4%) IPR002306 (17.4%) IPR014729 (17.4%)" "Aminoacyl-tRNA synthetase, class Ic (17.4%) Tryptophan-tRNA ligase (17.4%) Rossmann-like alpha/beta/alpha sandwich fold (17.4%)" TLEFLGNVVPCTDK Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000795 (7.7%) IPR005225 (7.7%) IPR027417 (7.7%)" "Translational (tr)-type GTP-binding domain (7.7%) Small GTP-binding domain (7.7%) P-loop containing nucleoside triphosphate hydrolase (7.7%)" LALMEGPDFPVALGVIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.3 (57.1%) 1.2.-.- (42.9%)" "2-oxoglutarate synthase (57.1%) Acting on the aldehyde or oxo group of donors (42.9%)" GO:0044281 (31.6%) "GO:0030976 (34.2%) GO:0016625 (30.8%) GO:0047553 (3.4%)" small molecule metabolic process (31.6%) "thiamine pyrophosphate binding (34.2%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (30.8%) 2-oxoglutarate synthase activity (3.4%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" IKSEGDYAAGK root "GO:0016787 (50%) GO:0046872 (50%)" "hydrolase activity (50%) metal ion binding (50%)" IPR039461 (100%) Peptidase family M49 (100%) SAGFPVIRDLMVDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.3.5.1 (51.3%) 1.3.5.4 (41%) 1.3.99.1 (7.7%)" "succinate dehydrogenase (51.3%) Transferred entry: 1.3.5.1 (41%) Deleted entry (7.7%)" "GO:0022904 (23.6%) GO:0009060 (22.5%) GO:0006099 (1.1%)" "GO:0009055 (22.9%) GO:0051537 (22.7%) GO:0008177 (3.9%)" "respiratory electron transport chain (23.6%) aerobic respiration (22.5%) tricarboxylic acid cycle (1.1%)" "electron transfer activity (22.9%) 2 iron, 2 sulfur cluster binding (22.7%) succinate dehydrogenase (quinone) activity (3.9%)" "IPR050573 (14.4%) IPR009051 (14.3%) IPR017896 (14.3%)" "Succinate Dehydrogenase/Fumarate Reductase Iron-Sulfur (14.4%) Alpha-helical ferredoxin (14.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14.3%)" EASEGELKGVLGYTEDAVVSTDFRGCANTSIFDAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.2.1.- (100%) With NAD(+) or NADP(+) as acceptor (100%) "GO:0006006 (16.7%) GO:0006096 (16.7%)" GO:0005737 (16.7%) "GO:0050661 (16.7%) GO:0051287 (16.7%) GO:0016620 (12.5%)" "glucose metabolic process (16.7%) glycolytic process (16.7%)" cytoplasm (16.7%) "NADP binding (16.7%) NAD binding (16.7%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (12.5%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" KIGVASLDELIDKTIPANIR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" AINTTSPIEKAPVTK Bacteria Bacteria IPR032265 (100%) Protein of unknown function DUF4831 (100%) ALDNVTPQVEVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (20.4%) GO:0000028 (0.2%)" "GO:0015935 (20.2%) GO:0005840 (0.4%) GO:0022627 (0.2%)" "GO:0003735 (20.4%) GO:0019843 (20.4%) GO:0000049 (17.3%)" "translation (20.4%) ribosomal small subunit assembly (0.2%)" "small ribosomal subunit (20.2%) ribosome (0.4%) cytosolic small ribosomal subunit (0.2%)" "structural constituent of ribosome (20.4%) rRNA binding (20.4%) tRNA binding (17.3%)" "IPR000235 (25%) IPR005717 (25%) IPR023798 (25%)" "Small ribosomal subunit protein uS7 (25%) Small ribosomal subunit protein uS7, bacteria/organella (25%) Small ribosomal subunit protein uS7 domain (25%)" IIDNLGFDTVEAGVEAAVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25%) "GO:0004494 (25%) GO:0031419 (25%) GO:0046872 (25%)" lactate fermentation to propionate and acetate (25%) "methylmalonyl-CoA mutase activity (25%) cobalamin binding (25%) metal ion binding (25%)" "IPR004608 (25%) IPR006099 (25%) IPR016176 (25%)" "Methylmalonyl-CoA mutase, small subunit (25%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25%)" MSQLLDSAVFPGIQGGPLEHVIAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15.2%) GO:0035999 (14.9%) GO:0032259 (11.7%)" "GO:0005829 (15.2%) GO:0016020 (0.1%)" "GO:0004372 (15.2%) GO:0030170 (15.2%) GO:0008168 (11.7%)" "glycine biosynthetic process from serine (15.2%) tetrahydrofolate interconversion (14.9%) methylation (11.7%)" "cytosol (15.2%) membrane (0.1%)" "glycine hydroxymethyltransferase activity (15.2%) pyridoxal phosphate binding (15.2%) methyltransferase activity (11.7%)" "IPR015421 (14.3%) IPR015422 (14.3%) IPR015424 (14.3%)" "Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%) Pyridoxal phosphate-dependent transferase (14.3%)" AVKEGMPEDEQKNAEAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006415 (31.1%) GO:0006412 (2.2%)" GO:0005737 (33.3%) GO:0043023 (33.3%) "translational termination (31.1%) translation (2.2%)" cytoplasm (33.3%) ribosomal large subunit binding (33.3%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" LKVYAGNEHNHAAQQPQVLDI Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0017148 (19.9%) GO:0006412 (19.8%) GO:0002181 (0%)" "GO:0022625 (19.9%) GO:0005840 (0.5%) GO:0005737 (0%)" "GO:0003729 (19.9%) GO:0003735 (19.9%) GO:0008270 (0%)" "negative regulation of translation (19.9%) translation (19.8%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (19.9%) ribosome (0.5%) cytoplasm (0%)" "mRNA binding (19.9%) structural constituent of ribosome (19.9%) zinc ion binding (0%)" "IPR005822 (25%) IPR036899 (25%) IPR005823 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13 superfamily (25%) Large ribosomal subunit protein uL13, bacteria (25%)" HVYTQKPLTHSVYESR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (96.4%) GO:0050112 (3.6%)" "nucleotide binding (96.4%) inositol 2-dehydrogenase (NAD+) activity (3.6%)" "IPR000683 (17.5%) IPR036291 (17.5%) IPR043906 (17.5%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (17.5%) NAD(P)-binding domain superfamily (17.5%) Gfo/Idh/MocA-like oxidoreductase, bacterial type, C-terminal (17.5%)" KLDVIVVGTGLAGASAAASLGEMGFR Prevotellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae 1.3.5.1 (100%) succinate dehydrogenase (100%) GO:0009061 (20%) GO:0005886 (20%) "GO:0009055 (20%) GO:0050660 (20%) GO:0000104 (10%)" anaerobic respiration (20%) plasma membrane (20%) "electron transfer activity (20%) flavin adenine dinucleotide binding (20%) succinate dehydrogenase activity (10%)" "IPR003953 (14.3%) IPR011280 (14.3%) IPR015939 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%)" LTEETRVESDLIGAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (25%) GO:0006531 (25%)" GO:0005829 (25%) GO:0008797 (25%) "tricarboxylic acid cycle (25%) aspartate metabolic process (25%)" cytosol (25%) aspartate ammonia-lyase activity (25%) "IPR000362 (14.3%) IPR008948 (14.3%) IPR018951 (14.3%)" "Fumarate lyase family (14.3%) L-Aspartase-like (14.3%) Fumarase C, C-terminal (14.3%)" VKEDMVVQVPDEVFGVKEWECEVISNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (16.7%) GO:0005886 (16.7%) "GO:0009055 (16.7%) GO:0016655 (16.7%) GO:0046872 (16.7%)" sodium ion transport (16.7%) plasma membrane (16.7%) "electron transfer activity (16.7%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (16.7%) metal ion binding (16.7%)" "IPR001041 (10%) IPR001433 (10%) IPR001709 (10%)" "2Fe-2S ferredoxin-type iron-sulfur binding domain (10%) Oxidoreductase FAD/NAD(P)-binding (10%) Flavoprotein pyridine nucleotide cytochrome reductase (10%)" SNYSDLEANYATLKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0006811 (25%) "GO:0009279 (25%) GO:0046930 (25%)" GO:0015288 (25%) monoatomic ion transport (25%) "cell outer membrane (25%) pore complex (25%)" porin activity (25%) "IPR006664 (20%) IPR006665 (20%) IPR011250 (20%)" "Outer membrane protein, bacterial (20%) OmpA-like domain (20%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (20%)" GAGNVKPQYLISVAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) GLDAQSIIEGVGLDPR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.1.1.22 (100%) UDP-glucose 6-dehydrogenase (100%) "GO:0000271 (27.3%) GO:0006065 (18.2%)" "GO:0003979 (27.3%) GO:0051287 (27.3%)" "polysaccharide biosynthetic process (27.3%) UDP-glucuronate biosynthetic process (18.2%)" "UDP-glucose 6-dehydrogenase activity (27.3%) NAD binding (27.3%)" "IPR001732 (11.1%) IPR008927 (11.1%) IPR013328 (11.1%)" "UDP-glucose/GDP-mannose dehydrogenase, N-terminal (11.1%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (11.1%) 6-phosphogluconate dehydrogenase, domain 2 (11.1%)" RGEIALTYIYGIGR Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (16.8%) "GO:0005829 (16.7%) GO:0015935 (16.7%) GO:0005840 (0.1%)" "GO:0003735 (16.8%) GO:0019843 (16.7%) GO:0000049 (16%)" translation (16.8%) "cytosol (16.7%) small ribosomal subunit (16.7%) ribosome (0.1%)" "structural constituent of ribosome (16.8%) rRNA binding (16.7%) tRNA binding (16%)" "IPR001892 (20.1%) IPR010979 (20%) IPR018269 (20%)" "Small ribosomal subunit protein uS13 (20.1%) Small ribosomal subunit protein uS13-like, H2TH (20%) Small ribosomal subunit protein uS13, conserved site (20%)" LAEPAPTGEQLQNILR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 1.-.-.- (100%) Oxidoreductases (100%) GO:0005829 (0.8%) "GO:0016491 (97.7%) GO:0010181 (0.8%) GO:0042803 (0.8%)" cytosol (0.8%) "oxidoreductase activity (97.7%) FMN binding (0.8%) protein homodimerization activity (0.8%)" "IPR000415 (25.5%) IPR029479 (25.5%) IPR052530 (25.5%)" "Nitroreductase-like (25.5%) Nitroreductase (25.5%) NAD(P)H nitroreductase (25.5%)" HLSELLGVDVQFANDCIGEEAGAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" VGKLEFPDALLKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.8%) GO:0043335 (16.4%) GO:0051083 (16.4%)" "GO:0003755 (16.4%) GO:0043022 (16.4%) GO:0044183 (16.4%)" "protein transport (16.8%) protein unfolding (16.4%) 'de novo' cotranslational protein folding (16.4%)" "peptidyl-prolyl cis-trans isomerase activity (16.4%) ribosome binding (16.4%) protein folding chaperone (16.4%)" "IPR027304 (20.2%) IPR037041 (20.2%) IPR008881 (20%)" "Trigger factor/SurA domain superfamily (20.2%) Trigger factor, C-terminal domain superfamily (20.2%) Trigger factor, ribosome-binding, bacterial (20%)" AGEEKMTFAIEYLDEQLSHIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006415 (33.3%) GO:0005737 (33.3%) GO:0043023 (33.3%) translational termination (33.3%) cytoplasm (33.3%) ribosomal large subunit binding (33.3%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" NMLIVETIDATKK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR041218 (25%) IPR049280 (25%) IPR049281 (25%)" "Domain of unknown function DUF5606 (25%) Domain of unknown function DUF6852 (25%) BVU_3817-like, C-terminal domain superfamily (25%)" RAVEGTPFECLKDAFVGPTLIAYSMEHPGAAAR Pseudomonadati Bacteria Pseudomonadati "GO:0006412 (23.7%) GO:0006417 (0.8%) GO:0002181 (0.3%)" "GO:0015934 (23.7%) GO:0005840 (2.7%) GO:0005737 (0.3%)" "GO:0003735 (23.7%) GO:0070180 (23.1%) GO:0019843 (0.5%)" "translation (23.7%) regulation of translation (0.8%) cytoplasmic translation (0.3%)" "large ribosomal subunit (23.7%) ribosome (2.7%) cytoplasm (0.3%)" "structural constituent of ribosome (23.7%) large ribosomal subunit rRNA binding (23.1%) rRNA binding (0.5%)" "IPR001790 (20.2%) IPR043141 (20.2%) IPR047865 (20.2%)" "Large ribosomal subunit protein uL10 (20.2%) Large ribosomal subunit protein uL10-like domain superfamily (20.2%) Large ribosomal subunit protein uL10, bacteria/organella (20.2%)" TFEEETSNYALHK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" CDILEPGTLQGYDRDPR root 6.3.1.2 (100%) glutamine synthetase (100%) "GO:0006542 (14.7%) GO:0019740 (14.7%) GO:0009314 (0%)" "GO:0005737 (14.7%) GO:0016020 (14.7%) GO:0005829 (0%)" "GO:0004356 (14.7%) GO:0005524 (13.1%) GO:0046872 (13%)" "glutamine biosynthetic process (14.7%) nitrogen utilization (14.7%) response to radiation (0%)" "cytoplasm (14.7%) membrane (14.7%) cytosol (0%)" "glutamine synthetase activity (14.7%) ATP binding (13.1%) metal ion binding (13%)" "IPR008146 (13.2%) IPR014746 (13.2%) IPR036651 (13%)" "Glutamine synthetase, catalytic domain (13.2%) Glutamine synthetase/guanido kinase, catalytic domain (13.2%) Glutamine synthetase, N-terminal domain superfamily (13%)" NISIQEAPAKDHFAYEFR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005737 (50%) GO:0016788 (50%) cytoplasm (50%) hydrolase activity, acting on ester bonds (50%) "IPR004843 (25%) IPR011658 (25%) IPR029052 (25%)" "Calcineurin-like, phosphoesterase domain (25%) PA14 domain (25%) Metallo-dependent phosphatase-like (25%)" IINGEVPEGLKGR root 3.6.1.15 (100%) nucleoside-triphosphate phosphatase (100%) "GO:0034605 (16.9%) GO:0042026 (15.9%) GO:0006508 (0.4%)" "GO:0005829 (15.4%) GO:0005737 (1.5%) GO:0005759 (0%)" "GO:0005524 (16.9%) GO:0016887 (16.9%) GO:0042802 (15.4%)" "cellular response to heat (16.9%) protein refolding (15.9%) proteolysis (0.4%)" "cytosol (15.4%) cytoplasm (1.5%) mitochondrial matrix (0%)" "ATP binding (16.9%) ATP hydrolysis activity (16.9%) identical protein binding (15.4%)" "IPR027417 (8.5%) IPR050130 (8.5%) IPR003959 (8.5%)" "P-loop containing nucleoside triphosphate hydrolase (8.5%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.5%) ATPase, AAA-type, core (8.5%)" SGVTHFTAETGEEGLAIIRK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.-.-.- (100%) Ligases (100%) GO:0015977 (20.6%) GO:0009317 (20.6%) "GO:0004658 (22.2%) GO:0003989 (20.6%) GO:0016740 (12.7%)" carbon fixation (20.6%) acetyl-CoA carboxylase complex (20.6%) "propionyl-CoA carboxylase activity (22.2%) acetyl-CoA carboxylase activity (20.6%) transferase activity (12.7%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" IADAGIVGLGGACFPTQVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 7.-.-.- (100%) Translocases (100%) GO:0022900 (19.6%) "GO:0005886 (19.6%) GO:0016020 (0.5%)" "GO:0009055 (20.1%) GO:0046872 (20.1%) GO:0051539 (20.1%)" electron transport chain (19.6%) "plasma membrane (19.6%) membrane (0.5%)" "electron transfer activity (20.1%) metal ion binding (20.1%) 4 iron, 4 sulfur cluster binding (20.1%)" "IPR010208 (14.3%) IPR011538 (14.3%) IPR017896 (14.3%)" "Ion-translocating oxidoreductase complex, subunit RnfC/RsxC (14.3%) NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain (14.3%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (14.3%)" DFLTEEILMAGSTAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR032265 (100%) Protein of unknown function DUF4831 (100%) KAATSSVCK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24%) GO:0030388 (24%)" GO:0016020 (4%) "GO:0004332 (24%) GO:0008270 (24%)" "glycolytic process (24%) fructose 1,6-bisphosphate metabolic process (24%)" membrane (4%) "fructose-bisphosphate aldolase activity (24%) zinc ion binding (24%)" "IPR000771 (25%) IPR011289 (25%) IPR013785 (25%)" "Fructose-bisphosphate aldolase, class-II (25%) Fructose-1,6-bisphosphate aldolase, class 2 (25%) Aldolase-type TIM barrel (25%)" EAEGQDFQLYPGELGKR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales GO:0034599 (32.3%) GO:0005829 (32.3%) "GO:0005506 (32.3%) GO:0016787 (3.1%)" cellular response to oxidative stress (32.3%) cytosol (32.3%) "iron ion binding (32.3%) hydrolase activity (3.1%)" "IPR007457 (50%) IPR036766 (50%)" "Fe(II) trafficking protein YggX (50%) Fe(II) trafficking protein YggX superfamily (50%)" NSGNDIVAPYADEFPGSTFYPGKKPWEQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006537 (26.3%) GO:0005829 (23.7%) "GO:0004354 (26.3%) GO:0000166 (23.7%)" glutamate biosynthetic process (26.3%) cytosol (23.7%) "glutamate dehydrogenase (NADP+) activity (26.3%) nucleotide binding (23.7%)" "IPR006095 (12.5%) IPR006096 (12.5%) IPR006097 (12.5%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (12.5%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (12.5%)" VALAHFQYINPLPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.2.7.3 (50%) 1.2.-.- (25%) 1.2.7.11 (25%)" "2-oxoglutarate synthase (50%) Acting on the aldehyde or oxo group of donors (25%) 2-oxoacid oxidoreductase (ferredoxin) (25%)" GO:0006979 (50%) "GO:0016903 (46.3%) GO:0016491 (1.9%) GO:0047553 (1.9%)" response to oxidative stress (50%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors (46.3%) oxidoreductase activity (1.9%) 2-oxoglutarate synthase activity (1.9%)" "IPR009014 (12.9%) IPR029061 (12.9%) IPR033412 (12.9%)" "Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.9%) Thiamin diphosphate-binding fold (12.9%) Pyruvate:ferredoxin oxidoreductase, core domain II (12.9%)" VTMAQECNFLIVPNTLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 5.1.1.1 (100%) alanine racemase (100%) GO:0030632 (19.8%) "GO:0005524 (19.8%) GO:0008784 (19.8%) GO:0016881 (19.8%)" D-alanine biosynthetic process (19.8%) "ATP binding (19.8%) alanine racemase activity (19.8%) acid-amino acid ligase activity (19.8%)" "IPR000821 (10%) IPR001608 (10%) IPR009006 (10%)" "Alanine racemase (10%) Alanine racemase, N-terminal (10%) Alanine racemase/group IV decarboxylase, C-terminal (10%)" EAIAQMPYEEAR Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium 3.1.11.6 (100%) exodeoxyribonuclease VII (100%) GO:0006308 (25%) "GO:0005829 (25%) GO:0009318 (25%)" GO:0008855 (25%) DNA catabolic process (25%) "cytosol (25%) exodeoxyribonuclease VII complex (25%)" exodeoxyribonuclease VII activity (25%) "IPR003761 (50%) IPR037004 (50%)" "Exonuclease VII, small subunit (50%) Exonuclease VII, small subunit superfamily (50%)" ITKPVAYMILAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" MLELCFEGHR root 2.1.1.13 (100%) methionine synthase (100%) "GO:0005975 (2.9%) GO:0007155 (2.9%) GO:0032259 (2.9%)" "GO:0009279 (62.9%) GO:0005576 (2.9%) GO:0005829 (2.9%)" "GO:0005509 (2.9%) GO:0008270 (2.9%) GO:0008705 (2.9%)" "carbohydrate metabolic process (2.9%) cell adhesion (2.9%) methylation (2.9%)" "cell outer membrane (62.9%) extracellular region (2.9%) cytosol (2.9%)" "calcium ion binding (2.9%) zinc ion binding (2.9%) methionine synthase activity (2.9%)" "IPR011990 (22.8%) IPR012944 (22.8%) IPR033985 (19.8%)" "Tetratricopeptide-like helical domain superfamily (22.8%) RagB/SusD domain (22.8%) SusD-like, N-terminal (19.8%)" STQLKDGEEVIGNQTK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0006281 (13%) GO:0006310 (13%) GO:0009432 (11.1%)" GO:0005829 (13%) "GO:0003697 (13%) GO:0005524 (13%) GO:0140664 (13%)" "DNA repair (13%) DNA recombination (13%) SOS response (11.1%)" cytosol (13%) "single-stranded DNA binding (13%) ATP binding (13%) ATP-dependent DNA damage sensor activity (13%)" "IPR013765 (11.7%) IPR020584 (11.7%) IPR020587 (11.7%)" "DNA recombination and repair protein RecA (11.7%) DNA recombination/repair protein RecA, conserved site (11.7%) DNA recombination and repair protein RecA, monomer-monomer interface (11.7%)" VIVKDLDENGNIVDVMR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.8%) GO:0000428 (16.8%) "GO:0003677 (16.8%) GO:0003899 (16.8%) GO:0000287 (16.1%)" DNA-templated transcription (16.8%) DNA-directed RNA polymerase complex (16.8%) "DNA binding (16.8%) DNA-directed RNA polymerase activity (16.8%) magnesium ion binding (16.1%)" "IPR000722 (9.1%) IPR006592 (9.1%) IPR007066 (9.1%)" "RNA polymerase, alpha subunit (9.1%) RNA polymerase, N-terminal (9.1%) RNA polymerase Rpb1, domain 3 (9.1%)" GILGANHVYYINGGAYYFDQKDYNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" KIVVTGVEMFRK Bacillota Bacteria Bacillati Bacillota 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (22.8%) "GO:0003746 (22.8%) GO:0005525 (22.8%) GO:0003924 (18.8%)" cytosol (22.8%) "translation elongation factor activity (22.8%) GTP binding (22.8%) GTPase activity (18.8%)" "IPR004161 (9.3%) IPR009000 (9.3%) IPR050055 (9.3%)" "Translation elongation factor EFTu-like, domain 2 (9.3%) Translation protein, beta-barrel domain superfamily (9.3%) Elongation factor Tu GTPase (9.3%)" VKLQPANPFTWASGWK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25.6%) GO:0044205 (25.6%)" "GO:0004588 (25.6%) GO:0000287 (23.1%)" "pyrimidine nucleobase biosynthetic process (25.6%) 'de novo' UMP biosynthetic process (25.6%)" "orotate phosphoribosyltransferase activity (25.6%) magnesium ion binding (23.1%)" "IPR000836 (25%) IPR004467 (25%) IPR023031 (25%)" "Phosphoribosyltransferase domain (25%) Orotate phosphoribosyl transferase domain (25%) Orotate phosphoribosyltransferase (25%)" LQEVVASTMVGGATLTK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25%) GO:0006099 (25%)" "GO:0004459 (25%) GO:0030060 (25%)" "lactate metabolic process (25%) tricarboxylic acid cycle (25%)" "L-lactate dehydrogenase (NAD+) activity (25%) L-malate dehydrogenase (NAD+) activity (25%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR011275 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 3 (16.7%)" LTQDILDAAVANK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" GVKVDDLETLYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.5%) GO:0006516 (19.5%)" GO:0005829 (19.5%) "GO:0000224 (19.5%) GO:0030246 (19.5%) GO:0016798 (2.3%)" "carbohydrate metabolic process (19.5%) glycoprotein catabolic process (19.5%)" cytosol (19.5%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.5%) carbohydrate binding (19.5%) hydrolase activity, acting on glycosyl bonds (2.3%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" AETHNFPTTVEPFNGAATGTGGEIR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.1%) GO:0006164 (0.9%)" GO:0005737 (20%) "GO:0004642 (20%) GO:0005524 (20%) GO:0046872 (20%)" "'de novo' IMP biosynthetic process (19.1%) purine nucleotide biosynthetic process (0.9%)" cytoplasm (20%) "phosphoribosylformylglycinamidine synthase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR010918 (11.2%) IPR041609 (11.2%) IPR055181 (11.2%)" "PurM-like, C-terminal domain (11.2%) Phosphoribosylformylglycinamidine synthase, linker domain (11.2%) FGAR-AT, PurM N-terminal-like domain (11.2%)" YVESQVYQGVVENLASEQAAR root 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0042777 (18.6%) GO:0015986 (0.1%)" "GO:0005886 (19.2%) GO:0045259 (19.2%) GO:0016020 (0%)" "GO:0046933 (19.2%) GO:0005524 (18.6%) GO:0016787 (5%)" "proton motive force-driven plasma membrane ATP synthesis (18.6%) proton motive force-driven ATP synthesis (0.1%)" "plasma membrane (19.2%) proton-transporting ATP synthase complex (19.2%) membrane (0%)" "proton-transporting ATP synthase activity, rotational mechanism (19.2%) ATP binding (18.6%) hydrolase activity (5%)" "IPR000131 (33.5%) IPR035968 (33.5%) IPR023632 (33.1%)" "ATP synthase, F1 complex, gamma subunit (33.5%) ATP synthase, F1 complex, gamma subunit superfamily (33.5%) ATP synthase, F1 complex, gamma subunit conserved site (33.1%)" NSDVEHDFLIDPIETVVDGEWLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" VSVPTMDAAEAFK root "1.17.7.3 (85.9%) 1.17.7.1 (14%) 1.17.4.3 (0.1%)" "(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (85.9%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin) (14%) Transferred entry: 1.17.7.1 (0.1%)" "GO:0016114 (17.4%) GO:0019288 (17.4%) GO:0008360 (0%)" "GO:0005829 (0%) GO:0005886 (0%)" "GO:0046429 (17.4%) GO:0051539 (17.4%) GO:0005506 (17%)" "terpenoid biosynthetic process (17.4%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (17.4%) regulation of cell shape (0%)" "cytosol (0%) plasma membrane (0%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (17.4%) 4 iron, 4 sulfur cluster binding (17.4%) iron ion binding (17%)" "IPR004588 (23.9%) IPR011005 (23.9%) IPR045854 (23.3%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (23.9%) Dihydropteroate synthase-like superfamily (23.9%) Nitrite and sulphite reductase 4Fe-4S domain-like superfamily (23.3%)" AAHIVDENGNYLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) GO:0000428 (16.9%) "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (16.2%)" DNA-templated transcription (16.9%) DNA-directed RNA polymerase complex (16.9%) "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (16.2%)" "IPR007081 (9.4%) IPR045867 (9.4%) IPR000722 (9%)" "RNA polymerase Rpb1, domain 5 (9.4%) DNA-directed RNA polymerase, subunit beta-prime (9.4%) RNA polymerase, alpha subunit (9%)" FLILSDEADDFKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR012912 (50%) IPR024047 (50%)" "Plasmid pRiA4b, Orf3-like domain (50%) MM3350-like superfamily (50%)" VMNSEAMKQEIAAIGHGYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0003824 (33.3%) GO:0046872 (33.3%) GO:0051536 (33.3%)" "catalytic activity (33.3%) metal ion binding (33.3%) iron-sulfur cluster binding (33.3%)" "IPR007197 (32.1%) IPR013785 (32.1%) IPR050377 (32.1%)" "Radical SAM (32.1%) Aldolase-type TIM barrel (32.1%) Radical SAM PqqA peptide cyclase/Mycofactocin maturase MftC-like (32.1%)" WCPGCGDHAFLNSLHK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.3 (80%) 1.2.-.- (20%)" "2-oxoglutarate synthase (80%) Acting on the aldehyde or oxo group of donors (20%)" GO:0044281 (32.8%) "GO:0030976 (33.3%) GO:0016625 (31.7%) GO:0047553 (1.7%)" small molecule metabolic process (32.8%) "thiamine pyrophosphate binding (33.3%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (31.7%) 2-oxoglutarate synthase activity (1.7%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" VIDTVNPIVEGGTGFIPGPFGTGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) "GO:0042777 (23.6%) GO:0046034 (1.1%)" "GO:0005524 (24.7%) GO:0046961 (24.7%) GO:0046933 (23.6%)" "proton motive force-driven plasma membrane ATP synthesis (23.6%) ATP metabolic process (1.1%)" "ATP binding (24.7%) proton-transporting ATPase activity, rotational mechanism (24.7%) proton-transporting ATP synthase activity, rotational mechanism (23.6%)" "IPR000194 (13%) IPR004100 (13%) IPR022878 (13%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (13%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (13%) V-type ATP synthase catalytic alpha chain (13%)" TCVNRVEAETGIAR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.99.1.3 (100%) sirohydrochlorin cobaltochelatase (100%) GO:0019251 (50%) GO:0016852 (50%) anaerobic cobalamin biosynthetic process (50%) sirohydrochlorin cobaltochelatase activity (50%) IPR010388 (100%) Anaerobic cobalt chelatase (100%) LADLRGQNEDQNVGIK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.3%) GO:0006457 (0.1%) GO:0009314 (0.1%)" "GO:0005737 (15.4%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0005524 (17.3%) GO:0140662 (17.3%) GO:0016853 (16.7%)" "protein refolding (17.3%) protein folding (0.1%) response to radiation (0.1%)" "cytoplasm (15.4%) cytosol (0.1%) membrane (0.1%)" "ATP binding (17.3%) ATP-dependent protein folding chaperone (17.3%) isomerase activity (16.7%)" "IPR027413 (17.1%) IPR001844 (17%) IPR002423 (17%)" "GroEL-like equatorial domain superfamily (17.1%) Chaperonin Cpn60/GroEL (17%) Chaperonin Cpn60/GroEL/TCP-1 family (17%)" GTVSTESGVLNQQPYGFNTR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "1.11.1.15 (50%) 1.11.1.29 (37%) 1.11.1.24 (8.7%)" "Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (50%) mycoredoxin-dependent peroxiredoxin (37%) thioredoxin-dependent peroxiredoxin (8.7%)" "GO:0006979 (34.6%) GO:0006972 (0.1%) GO:0033194 (0.1%)" "GO:0005737 (30.1%) GO:0005829 (0.1%)" "GO:0004601 (33.5%) GO:0051920 (1.4%) GO:0140824 (0.1%)" "response to oxidative stress (34.6%) hyperosmotic response (0.1%) response to hydroperoxide (0.1%)" "cytoplasm (30.1%) cytosol (0.1%)" "peroxidase activity (33.5%) peroxiredoxin activity (1.4%) thioredoxin-dependent peroxiredoxin activity (0.1%)" "IPR015946 (20.1%) IPR052707 (20%) IPR036102 (20%)" "K homology domain-like, alpha/beta (20.1%) OsmC/Ohr Peroxiredoxin (20%) OsmC/Ohr superfamily (20%)" EFIKDEYYLNTLNPTGTEEAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0016829 (100%) lyase activity (100%) IPR032149 (100%) Domain of unknown function DUF4988 (100%) AHPHDGAGQGLIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0030170 (33.3%) GO:0008184 (33.1%) GO:0004645 (0.2%)" carbohydrate metabolic process (33.3%) "pyridoxal phosphate binding (33.3%) glycogen phosphorylase activity (33.1%) 1,4-alpha-oligoglucan phosphorylase activity (0.2%)" "IPR011834 (25.2%) IPR052182 (25.2%) IPR000811 (25%)" "Alpha-glucan phosphorylase (25.2%) Glycogen_Maltodextrin_Phosphorylase (25.2%) Glycosyl transferase, family 35 (25%)" KGIFSIMNYLNPLR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (18.8%) GO:0005829 (18.8%) "GO:0004612 (18.8%) GO:0005524 (18.8%) GO:0046872 (18%)" gluconeogenesis (18.8%) cytosol (18.8%) "phosphoenolpyruvate carboxykinase (ATP) activity (18.8%) ATP binding (18.8%) metal ion binding (18%)" "IPR001272 (25.7%) IPR008210 (25.7%) IPR013035 (24.6%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.7%) Phosphoenolpyruvate carboxykinase, N-terminal (25.7%) Phosphoenolpyruvate carboxykinase, C-terminal (24.6%)" LNLATFVTTYMDDYATK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.1.15 (100%) glutamate decarboxylase (100%) GO:0006538 (24.9%) GO:0005829 (24.9%) "GO:0004351 (24.9%) GO:0030170 (24.9%) GO:0016829 (0.3%)" L-glutamate catabolic process (24.9%) cytosol (24.9%) "glutamate decarboxylase activity (24.9%) pyridoxal phosphate binding (24.9%) lyase activity (0.3%)" "IPR002129 (25%) IPR010107 (25%) IPR015421 (25%)" "Pyridoxal phosphate-dependent decarboxylase (25%) Glutamate decarboxylase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%)" ADKDKPYMDIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) QTAFSQYDRPQAR root "1.1.1.1 (53.9%) 1.2.1.10 (45.9%) 1.-.-.- (0.2%)" "alcohol dehydrogenase (53.9%) acetaldehyde dehydrogenase (acetylating) (45.9%) Oxidoreductases (0.2%)" "GO:0015976 (17.5%) GO:0006066 (17.5%) GO:0006113 (0%)" "GO:0005829 (0%) GO:0016020 (0%)" "GO:0046872 (22.3%) GO:0004022 (21%) GO:0008774 (18.6%)" "carbon utilization (17.5%) alcohol metabolic process (17.5%) fermentation (0%)" "cytosol (0%) membrane (0%)" "metal ion binding (22.3%) alcohol dehydrogenase (NAD+) activity (21%) acetaldehyde dehydrogenase (acetylating) activity (18.6%)" "IPR039697 (11.4%) IPR056798 (11.4%) IPR018211 (11%)" "Iron-type alcohol dehydrogenase-like (11.4%) Fe-containing alcohol dehydrogenase-like, C-terminal (11.4%) Alcohol dehydrogenase, iron-type, conserved site (11%)" TVPMFNEALAELNK root "GO:0006412 (33%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0022627 (33%) GO:0005840 (0.7%) GO:0005737 (0.1%)" "GO:0003735 (33%) GO:0008270 (0.1%)" "translation (33%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (33%) ribosome (0.7%) cytoplasm (0.1%)" "structural constituent of ribosome (33%) zinc ion binding (0.1%)" "IPR001865 (25%) IPR005706 (25%) IPR023591 (25%)" "Small ribosomal subunit protein uS2 (25%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25%)" EAKDMVDGAPSVVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.5%)" "GO:0003729 (24.9%) GO:0003735 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.5%)" "mRNA binding (24.9%) structural constituent of ribosome (24.9%)" "IPR000206 (20.1%) IPR013823 (20.1%) IPR014719 (20.1%)" "Large ribosomal subunit protein bL12 (20.1%) Large ribosomal subunit protein bL12, C-terminal (20.1%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20.1%)" IVYDDKGVEVFNFGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.7 (100%) DNA-directed DNA polymerase (100%) GO:0045004 (24.6%) GO:0005829 (24.6%) "GO:0003676 (24.6%) GO:0008408 (24.6%) GO:0003887 (1.8%)" DNA replication proofreading (24.6%) cytosol (24.6%) "nucleic acid binding (24.6%) 3'-5' exonuclease activity (24.6%) DNA-directed DNA polymerase activity (1.8%)" "IPR012337 (25%) IPR013520 (25%) IPR036397 (25%)" "Ribonuclease H-like superfamily (25%) Ribonuclease H-like domain (25%) Ribonuclease H superfamily (25%)" VSIDKLHDIITEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.14 (100%) glycine--tRNA ligase (100%) "GO:0006426 (12.5%) GO:0015966 (12.5%)" "GO:0005737 (12.5%) GO:0070062 (12.5%) GO:1990742 (12.5%)" "GO:0004081 (12.5%) GO:0004820 (12.5%) GO:0005524 (12.5%)" "glycyl-tRNA aminoacylation (12.5%) diadenosine tetraphosphate biosynthetic process (12.5%)" "cytoplasm (12.5%) extracellular exosome (12.5%) microvesicle (12.5%)" "bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (12.5%) glycine-tRNA ligase activity (12.5%) ATP binding (12.5%)" "IPR002314 (11.1%) IPR002315 (11.1%) IPR004154 (11.1%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.1%) Glycyl-tRNA synthetase (11.1%) Anticodon-binding (11.1%)" GSSLMFLKPGMQVPVSQLIR root "3.4.16.4 (99.7%) 3.5.2.6 (0.3%)" "serine-type D-Ala-D-Ala carboxypeptidase (99.7%) beta-lactamase (0.3%)" "GO:0006508 (11.4%) GO:0008360 (11.4%) GO:0071555 (11.4%)" "GO:0005886 (10.9%) GO:0030288 (10.6%)" "GO:0009002 (11.4%) GO:0008658 (10.9%) GO:0042803 (10.6%)" "proteolysis (11.4%) regulation of cell shape (11.4%) cell wall organization (11.4%)" "plasma membrane (10.9%) outer membrane-bounded periplasmic space (10.6%)" "serine-type D-Ala-D-Ala carboxypeptidase activity (11.4%) penicillin binding (10.9%) protein homodimerization activity (10.6%)" "IPR001967 (17.2%) IPR012338 (17.2%) IPR018044 (17.1%)" "Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal (17.2%) Beta-lactamase/transpeptidase-like (17.2%) Peptidase S11, D-alanyl-D-alanine carboxypeptidase A (17.1%)" FNVNLFTKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005840 (25%) GO:1990904 (25%)" GO:0003735 (25%) translation (25%) "ribosome (25%) ribonucleoprotein complex (25%)" structural constituent of ribosome (25%) "IPR001383 (25%) IPR026569 (25%) IPR034704 (25%)" "Large ribosomal subunit protein bL28, bacteria (25%) Large ribosomal subunit protein bL28 (25%) Large ribosomal subunit protein bL28/bL31-like superfamily (25%)" NFIAVHEMLDGFR root "1.16.-.- (98.9%) 1.16.3.1 (0.9%) 1.-.-.- (0.2%)" "Oxidizing metal ions (98.9%) ferroxidase (0.9%) Oxidoreductases (0.2%)" "GO:0006879 (14.3%) GO:0030261 (14.3%) GO:0006950 (0%)" "GO:0005737 (14.3%) GO:0009295 (11.1%) GO:0016020 (0%)" "GO:0008199 (15.5%) GO:0016722 (15.4%) GO:0003677 (14.6%)" "intracellular iron ion homeostasis (14.3%) chromosome condensation (14.3%) response to stress (0%)" "cytoplasm (14.3%) nucleoid (11.1%) membrane (0%)" "ferric iron binding (15.5%) oxidoreductase activity, acting on metal ions (15.4%) DNA binding (14.6%)" "IPR002177 (16.9%) IPR008331 (16.9%) IPR009078 (16.9%)" "DNA-binding protein Dps (16.9%) Ferritin/DPS domain (16.9%) Ferritin-like superfamily (16.9%)" SLNGEIYLTHTEVPAALGGHGIGSQLAEK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0016740 (100%) transferase activity (100%) "IPR016181 (33.3%) IPR031165 (33.3%) IPR045057 (33.3%)" "Acyl-CoA N-acyltransferase (33.3%) Yjdj-type Gcn5-related N-acetyltransferase (33.3%) Gcn5-related N-acetyltransferase (33.3%)" LLEMGFKEEAIGHNAIAAGFQGQR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.25 (100%) L-fucose isomerase (100%) "GO:0019571 (16.7%) GO:0042355 (16.7%)" GO:0005737 (16.7%) "GO:0008736 (16.7%) GO:0008790 (16.7%) GO:0030145 (16.7%)" "D-arabinose catabolic process (16.7%) L-fucose catabolic process (16.7%)" cytoplasm (16.7%) "L-fucose isomerase activity (16.7%) arabinose isomerase activity (16.7%) manganese ion binding (16.7%)" "IPR004216 (11.1%) IPR005763 (11.1%) IPR009015 (11.1%)" "L-fucose/L-arabinose isomerase, C-terminal (11.1%) L-fucose isomerase (11.1%) L-fucose isomerase, N-terminal/central domain superfamily (11.1%)" LIMDQIILQMGQK Pseudomonadati Bacteria Pseudomonadati "5.2.1.8 (99.8%) 5.-.-.- (0.2%)" "peptidylprolyl isomerase (99.8%) Isomerases (0.2%)" "GO:0043165 (14.1%) GO:0050821 (14.1%) GO:0006457 (14.1%)" "GO:0030288 (14.1%) GO:0042597 (0.3%)" "GO:0003755 (14.7%) GO:0042277 (14.1%) GO:0051082 (14.1%)" "Gram-negative-bacterium-type cell outer membrane assembly (14.1%) protein stabilization (14.1%) protein folding (14.1%)" "outer membrane-bounded periplasmic space (14.1%) periplasmic space (0.3%)" "peptidyl-prolyl cis-trans isomerase activity (14.7%) peptide binding (14.1%) unfolded protein binding (14.1%)" "IPR015391 (14.5%) IPR050280 (14.5%) IPR027304 (14.5%)" "SurA N-terminal (14.5%) Outer Membrane Protein Chaperone SurA (14.5%) Trigger factor/SurA domain superfamily (14.5%)" SIPSGIFQGDKVNIIGNGVVIDPALFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.6%) GO:0046040 (16.6%)" GO:0005737 (16.6%) "GO:0004019 (16.6%) GO:0005525 (16.6%) GO:0000287 (15.7%)" "'de novo' AMP biosynthetic process (16.6%) IMP metabolic process (16.6%)" cytoplasm (16.6%) "adenylosuccinate synthase activity (16.6%) GTP binding (16.6%) magnesium ion binding (15.7%)" "IPR001114 (14.5%) IPR027417 (14.5%) IPR033128 (14.5%)" "Adenylosuccinate synthetase (14.5%) P-loop containing nucleoside triphosphate hydrolase (14.5%) Adenylosuccinate synthase, active site (14.5%)" MRVVVDKAQSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.13.11.24 (100%) quercetin 2,3-dioxygenase (100%) "GO:0046872 (80%) GO:0008127 (20%)" "metal ion binding (80%) quercetin 2,3-dioxygenase activity (20%)" "IPR003829 (20%) IPR011051 (20%) IPR012093 (20%)" "Pirin, N-terminal domain (20%) RmlC-like cupin domain superfamily (20%) Pirin (20%)" LKDAHPGSTVTILTMGPGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0009055 (100%) electron transfer activity (100%) "IPR012255 (20.3%) IPR014729 (20.3%) IPR014730 (20.3%)" "Electron transfer flavoprotein, beta subunit (20.3%) Rossmann-like alpha/beta/alpha sandwich fold (20.3%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (20.3%)" YLAGVLDSNASR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.-.-.- (100%) Ligases (100%) GO:0015977 (22.2%) GO:0009317 (22.2%) "GO:0004658 (23.1%) GO:0003989 (22.2%) GO:0016740 (9.5%)" carbon fixation (22.2%) acetyl-CoA carboxylase complex (22.2%) "propionyl-CoA carboxylase activity (23.1%) acetyl-CoA carboxylase activity (22.2%) transferase activity (9.5%)" "IPR011763 (20%) IPR029045 (20%) IPR034733 (20%)" "Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20%)" LAIAYSDGVIQNSEKVNENVMK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.4.1.21 (100%) starch synthase (100%) "GO:0016757 (85%) GO:0009011 (15%)" "glycosyltransferase activity (85%) alpha-1,4-glucan glucosyltransferase (ADP-glucose donor) activity (15%)" IPR013534 (100%) Starch synthase, catalytic domain (100%) ALAQLPDSCAASATCLQQQR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "6.3.1.2 (66.7%) 6.3.1.- (33.3%)" "glutamine synthetase (66.7%) Acid--ammonia (or amine) ligases (amide synthases) (33.3%)" "GO:0006542 (20%) GO:0019740 (20%)" "GO:0005737 (20%) GO:0016020 (20%)" GO:0004356 (20%) "glutamine biosynthetic process (20%) nitrogen utilization (20%)" "cytoplasm (20%) membrane (20%)" glutamine synthetase activity (20%) "IPR008146 (25%) IPR008147 (25%) IPR014746 (25%)" "Glutamine synthetase, catalytic domain (25%) Glutamine synthetase, N-terminal domain (25%) Glutamine synthetase/guanido kinase, catalytic domain (25%)" IYGYNNVEIPTTLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.6%) GO:0009328 (16.6%) "GO:0000287 (16.6%) GO:0004826 (16.6%) GO:0005524 (16.6%)" phenylalanyl-tRNA aminoacylation (16.6%) phenylalanine-tRNA ligase complex (16.6%) "magnesium ion binding (16.6%) phenylalanine-tRNA ligase activity (16.6%) ATP binding (16.6%)" "IPR005147 (7.8%) IPR009061 (7.8%) IPR041616 (7.8%)" "tRNA synthetase, B5-domain (7.8%) Putative DNA-binding domain superfamily (7.8%) Phenylalanyl tRNA synthetase beta chain, core domain (7.8%)" YFNENFLYDQSNPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" IYKENPEAETGEIQVR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.2.1.3 (100%) long-chain-fatty-acid--CoA ligase (100%) GO:0016020 (8.6%) "GO:0016405 (68.6%) GO:0004467 (22.9%)" membrane (8.6%) "CoA-ligase activity (68.6%) long-chain fatty acid-CoA ligase activity (22.9%)" "IPR000873 (33.3%) IPR020845 (33.3%) IPR042099 (33.3%)" "AMP-dependent synthetase/ligase domain (33.3%) AMP-binding, conserved site (33.3%) ANL, N-terminal domain (33.3%)" QVYENQGHMYENILIPITDGKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11%)" "GO:0005886 (11.1%) GO:0031522 (11%) GO:0005829 (10.8%)" "GO:0005524 (11.1%) GO:0046872 (11%) GO:0004386 (0.4%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11%)" "plasma membrane (11.1%) cell envelope Sec protein transport complex (11%) cytosol (10.8%)" "ATP binding (11.1%) metal ion binding (11%) helicase activity (0.4%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR011115 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SecA DEAD-like, N-terminal (7.7%)" SAVETGTPFTFNR Bacteria Bacteria 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0009263 (24.9%) GO:0032259 (0.1%)" GO:0005971 (24.9%) "GO:0004748 (24.9%) GO:0005524 (24.9%) GO:0008168 (0.1%)" "deoxyribonucleotide biosynthetic process (24.9%) methylation (0.1%)" ribonucleoside-diphosphate reductase complex (24.9%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (24.9%) ATP binding (24.9%) methyltransferase activity (0.1%)" "IPR000788 (16.9%) IPR013346 (16.9%) IPR039718 (16.9%)" "Ribonucleotide reductase large subunit, C-terminal (16.9%) Ribonucleotide reductase, class I, alpha subunit, C-terminal (16.9%) Ribonucleoside-diphosphate reductase large subunit (16.9%)" ILPVYGGSSIESQIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.6.4.13 (95.7%) 3.6.4.- (4.3%)" "RNA helicase (95.7%) Acting on ATP; involved in cellular and subcellular movement (4.3%)" "GO:0042255 (9.6%) GO:0009266 (8.5%) GO:0009409 (1.1%)" "GO:0005829 (14.1%) GO:0005840 (1.1%)" "GO:0003724 (16.4%) GO:0005524 (16.4%) GO:0016787 (16.4%)" "ribosome assembly (9.6%) response to temperature stimulus (8.5%) response to cold (1.1%)" "cytosol (14.1%) ribosome (1.1%)" "RNA helicase activity (16.4%) ATP binding (16.4%) hydrolase activity (16.4%)" "IPR000629 (11.3%) IPR001650 (11.3%) IPR011545 (11.3%)" "ATP-dependent RNA helicase DEAD-box, conserved site (11.3%) Helicase, C-terminal domain-like (11.3%) DEAD/DEAH-box helicase domain (11.3%)" SSFVNMITMGMDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.3.- (100%) Acting on acid anhydrides; catalyzing transmembrane movement of substances (100%) "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR011703 (25%) IPR027417 (25%) IPR041628 (25%)" "ATPase, AAA-3 (25%) P-loop containing nucleoside triphosphate hydrolase (25%) ChlI/MoxR, AAA lid domain (25%)" MVFDDNALYRHPDLQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.2.1.5 (95.5%) 6.2.1.- (4.5%)" "succinate--CoA ligase (ADP-forming) (95.5%) Acid--thiol ligases (4.5%)" "GO:0006099 (13.2%) GO:0006104 (13.2%)" "GO:0005829 (13.2%) GO:0042709 (13.2%)" "GO:0000287 (13.2%) GO:0004775 (13.2%) GO:0005524 (13.2%)" "tricarboxylic acid cycle (13.2%) succinyl-CoA metabolic process (13.2%)" "cytosol (13.2%) succinate-CoA ligase complex (13.2%)" "magnesium ion binding (13.2%) succinate-CoA ligase (ADP-forming) activity (13.2%) ATP binding (13.2%)" "IPR005809 (16.7%) IPR005811 (16.7%) IPR013650 (16.7%)" "Succinate--CoA ligase-like, beta subunit (16.7%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (16.7%) ATP-grasp fold, succinyl-CoA synthetase-type (16.7%)" GNTGENLLALLEGR root "GO:0042274 (19.8%) GO:0006412 (19.6%) GO:0006353 (0.1%)" "GO:0015935 (19.8%) GO:0005840 (0.4%) GO:0005737 (0%)" "GO:0019843 (19.8%) GO:0003735 (19.8%) GO:0016787 (0.3%)" "ribosomal small subunit biogenesis (19.8%) translation (19.6%) DNA-templated transcription termination (0.1%)" "small ribosomal subunit (19.8%) ribosome (0.4%) cytoplasm (0%)" "rRNA binding (19.8%) structural constituent of ribosome (19.8%) hydrolase activity (0.3%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR018079 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, conserved site (16.7%)" KLEHAVPMAK root "4.1.2.14 (55.1%) 4.1.3.42 (41.3%) 4.1.3.16 (3.4%)" "2-dehydro-3-deoxy-phosphogluconate aldolase (55.1%) (4S)-4-hydroxy-2-oxoglutarate aldolase (41.3%) 4-hydroxy-2-oxoglutarate aldolase (3.4%)" "GO:0009255 (0.2%) GO:0019521 (0.1%) GO:0009082 (0%)" "GO:0005737 (29.4%) GO:0005829 (0.1%) GO:0016020 (0%)" "GO:0008675 (28%) GO:0008700 (28%) GO:0016829 (9.1%)" "Entner-Doudoroff pathway through 6-phosphogluconate (0.2%) D-gluconate metabolic process (0.1%) branched-chain amino acid biosynthetic process (0%)" "cytoplasm (29.4%) cytosol (0.1%) membrane (0%)" "2-dehydro-3-deoxy-phosphogluconate aldolase activity (28%) (R,S)-4-hydroxy-2-oxoglutarate aldolase activity (28%) lyase activity (9.1%)" "IPR013785 (25%) IPR000887 (25%) IPR031337 (25%)" "Aldolase-type TIM barrel (25%) KDPG/KHG aldolase (25%) KDPG/KHG aldolase, active site 1 (25%)" LTTDYLTLQNNAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR031025 (50%) IPR032295 (50%)" "LruC domain (50%) Domain of unknown function DUF4842 (50%)" FDHIMMAWETSITK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (34.7%) "GO:0016616 (30.5%) GO:0016615 (29.5%) GO:0030060 (5.3%)" malate metabolic process (34.7%) "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (30.5%) malate dehydrogenase activity (29.5%) L-malate dehydrogenase (NAD+) activity (5.3%)" "IPR015955 (17.3%) IPR022383 (17.3%) IPR010945 (16.8%)" "Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (17.3%) Lactate/malate dehydrogenase, C-terminal (17.3%) Malate dehydrogenase, type 2 (16.8%)" SSDKVYQLLDEVWKPALAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.15.5 (100%) peptidyl-dipeptidase Dcp (100%) GO:0006508 (19%) GO:0005829 (19%) "GO:0004180 (19%) GO:0004222 (19%) GO:0046872 (19%)" proteolysis (19%) cytosol (19%) "carboxypeptidase activity (19%) metalloendopeptidase activity (19%) metal ion binding (19%)" "IPR001567 (16.7%) IPR024077 (16.7%) IPR024079 (16.7%)" "Peptidase M3A/M3B catalytic domain (16.7%) Neurolysin/Thimet oligopeptidase, domain 2 (16.7%) Metallopeptidase, catalytic domain superfamily (16.7%)" DMLLEHGATTSREER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" MKEGNTILIGTSQR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (33.3%) IPR002933 (33.3%) IPR011650 (33.3%)" "Peptidase M20C, Xaa-His dipeptidase (33.3%) Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%)" VTPMHGGEGYVCPITLPAYQAAEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.4.13.- (81.8%) 3.5.1.18 (18.2%)" "Dipeptidases (81.8%) succinyl-diaminopimelate desuccinylase (18.2%)" "GO:0046872 (49.2%) GO:0016787 (34.9%) GO:0016805 (12.7%)" "metal ion binding (49.2%) hydrolase activity (34.9%) dipeptidase activity (12.7%)" "IPR002933 (33.3%) IPR011650 (33.3%) IPR051458 (33.3%)" "Peptidase M20 (33.3%) Peptidase M20, dimerisation domain (33.3%) Cytosolic and Metallo Dipeptidase (33.3%)" DKGNDYTEIEELVR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.2.9 (100%) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase (100%) "GO:0008360 (14.8%) GO:0051301 (14.8%) GO:0009252 (13.6%)" GO:0005737 (14.8%) "GO:0005524 (14.8%) GO:0008764 (14.8%) GO:0016874 (0.4%)" "regulation of cell shape (14.8%) cell division (14.8%) peptidoglycan biosynthetic process (13.6%)" cytoplasm (14.8%) "ATP binding (14.8%) UDP-N-acetylmuramoylalanine-D-glutamate ligase activity (14.8%) ligase activity (0.4%)" "IPR005762 (20.8%) IPR036615 (20.8%) IPR004101 (20.2%)" "UDP-N-acetylmuramoylalanine-D-glutamate ligase MurD (20.8%) Mur ligase, C-terminal domain superfamily (20.8%) Mur ligase, C-terminal (20.2%)" NMEIIEDIANR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (50%) GO:0004356 (50%) glutamine biosynthetic process (50%) glutamine synthetase activity (50%) "IPR008146 (14.4%) IPR008147 (14.4%) IPR022147 (14.4%)" "Glutamine synthetase, catalytic domain (14.4%) Glutamine synthetase, N-terminal domain (14.4%) Glutamine synthetase type III N-terminal (14.4%)" NYSLLVVPGYIGSNAILDKWSK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033103 (50%) GO:0033104 (50%) protein secretion by the type VI secretion system (50%) type VI protein secretion system complex (50%) IPR035576 (100%) Type VI secretion system TssC (100%) IIGTFEEITASVPEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0002181 (20%) GO:0015934 (20%) "GO:0003735 (20%) GO:0016740 (20%) GO:0019843 (19.7%)" cytoplasmic translation (20%) large ribosomal subunit (20%) "structural constituent of ribosome (20%) transferase activity (20%) rRNA binding (19.7%)" "IPR012340 (11.2%) IPR002171 (11.1%) IPR005880 (11.1%)" "Nucleic acid-binding, OB-fold (11.2%) Large ribosomal subunit protein uL2 (11.1%) Large ribosomal subunit protein uL2, bacteria/organella (11.1%)" DSGESGPQQWAGVVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR038179 (100%) NigD-like, N-terminal domain superfamily (100%) FKSQVYILSKDEGGR Coprobacillaceae Bacteria Bacillati Bacillota Erysipelotrichia Erysipelotrichales Coprobacillaceae 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (20%) "GO:0000287 (20%) GO:0003746 (20%) GO:0003924 (20%)" cytosol (20%) "magnesium ion binding (20%) translation elongation factor activity (20%) GTPase activity (20%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" VMIHQPLGGYQGQATDIEIHAR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "3.4.21.92 (99.9%) 3.4.21.- (0.1%)" "endopeptidase Clp (99.9%) Serine endopeptidases (0.1%)" "GO:0006515 (16.5%) GO:0006508 (0.2%) GO:0009266 (0%)" "GO:0009368 (16.5%) GO:0005737 (16.5%) GO:0005829 (0%)" "GO:0004176 (16.5%) GO:0004252 (16.5%) GO:0051117 (16.5%)" "protein quality control for misfolded or incompletely synthesized proteins (16.5%) proteolysis (0.2%) response to temperature stimulus (0%)" "endopeptidase Clp complex (16.5%) cytoplasm (16.5%) cytosol (0%)" "ATP-dependent peptidase activity (16.5%) serine-type endopeptidase activity (16.5%) ATPase binding (16.5%)" "IPR023562 (20.1%) IPR029045 (20.1%) IPR033135 (20.1%)" "Clp protease proteolytic subunit /Translocation-enhancing protein TepA (20.1%) ClpP/crotonase-like domain superfamily (20.1%) ClpP, histidine active site (20.1%)" MNIDTDTQWATWEGVLNYYK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006094 (19.9%) GO:0006096 (19.9%)" GO:0005829 (19.9%) "GO:0004332 (19.9%) GO:0008270 (19.9%) GO:0016829 (0.2%)" "gluconeogenesis (19.9%) glycolytic process (19.9%)" cytosol (19.9%) "fructose-bisphosphate aldolase activity (19.9%) zinc ion binding (19.9%) lyase activity (0.2%)" "IPR000771 (33.3%) IPR006411 (33.3%) IPR013785 (33.3%)" "Fructose-bisphosphate aldolase, class-II (33.3%) Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype (33.3%) Aldolase-type TIM barrel (33.3%)" TCMYPGYPELYMQFNKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005980 (33.3%) "GO:0004134 (33.3%) GO:0004135 (33.3%)" glycogen catabolic process (33.3%) "4-alpha-glucanotransferase activity (33.3%) amylo-alpha-1,6-glucosidase activity (33.3%)" "IPR008928 (20%) IPR010401 (20%) IPR012341 (20%)" "Six-hairpin glycosidase superfamily (20%) Glycogen debranching enzyme (20%) Six-hairpin glycosidase-like superfamily (20%)" ITIGLNLPSGEMGRK Pseudomonadati Bacteria Pseudomonadati 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006207 (20.7%) GO:0006221 (20.5%)" "GO:0009347 (20.7%) GO:0005737 (0%)" "GO:0046872 (20.3%) GO:0016740 (17.7%) GO:0004070 (0.1%)" "'de novo' pyrimidine nucleobase biosynthetic process (20.7%) pyrimidine nucleotide biosynthetic process (20.5%)" "aspartate carbamoyltransferase complex (20.7%) cytoplasm (0%)" "metal ion binding (20.3%) transferase activity (17.7%) aspartate carbamoyltransferase activity (0.1%)" "IPR002801 (20.1%) IPR020545 (20.1%) IPR036793 (20.1%)" "Aspartate transcarbamylase regulatory subunit (20.1%) Aspartate carbamoyltransferase regulatory subunit, N-terminal (20.1%) Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily (20.1%)" AQFYQNLQNYLETELKR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.1.11.2 (100%) exodeoxyribonuclease III (100%) "GO:0006281 (20.2%) GO:0006974 (0.1%)" GO:0005829 (0.1%) "GO:0008311 (20.2%) GO:0003677 (19.6%) GO:0004519 (19.6%)" "DNA repair (20.2%) DNA damage response (0.1%)" cytosol (0.1%) "double-stranded DNA 3'-5' DNA exonuclease activity (20.2%) DNA binding (19.6%) endonuclease activity (19.6%)" "IPR005135 (17.1%) IPR036691 (17.1%) IPR037493 (17.1%)" "Endonuclease/exonuclease/phosphatase (17.1%) Endonuclease/exonuclease/phosphatase superfamily (17.1%) Exodeoxyribonuclease III-like (17.1%)" ASYSIVGNDVPIGVTNER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006826 (50%) GO:0009279 (50%) iron ion transport (50%) cell outer membrane (50%) "IPR000531 (12.5%) IPR008969 (12.5%) IPR012910 (12.5%)" "TonB-dependent receptor-like, beta-barrel (12.5%) Carboxypeptidase-like, regulatory domain superfamily (12.5%) TonB-dependent receptor, plug domain (12.5%)" AQEAGITTVVFDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (24.9%) "GO:0022625 (24.9%) GO:0005840 (0.2%)" "GO:0003735 (24.9%) GO:0008097 (24.9%)" translation (24.9%) "cytosolic large ribosomal subunit (24.9%) ribosome (0.2%)" "structural constituent of ribosome (24.9%) 5S rRNA binding (24.9%)" "IPR005484 (33.8%) IPR004389 (33.5%) IPR057268 (32.6%)" "Large ribosomal subunit protein uL18, bacterial/plantae/animalia (33.8%) Large ribosomal subunit protein uL18, bacteria (33.5%) Large ribosomal subunit protein uL18 (32.6%)" GTTAVMFCNVANAPAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0005840 (50%) GO:1990904 (50%)" "ribosome (50%) ribonucleoprotein complex (50%)" "IPR001790 (33.3%) IPR043141 (33.3%) IPR047865 (33.3%)" "Large ribosomal subunit protein uL10 (33.3%) Large ribosomal subunit protein uL10-like domain superfamily (33.3%) Large ribosomal subunit protein uL10, bacteria/organella (33.3%)" LMAELKELETVERPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006354 (20%) GO:0032784 (20%)" "GO:0003677 (20%) GO:0003746 (20%) GO:0070063 (20%)" "DNA-templated transcription elongation (20%) regulation of DNA-templated transcription elongation (20%)" "DNA binding (20%) translation elongation factor activity (20%) RNA polymerase binding (20%)" "IPR001437 (12.5%) IPR006359 (12.5%) IPR018151 (12.5%)" "Transcription elongation factor, GreA/GreB, C-terminal (12.5%) Transcription elongation factor GreA (12.5%) Transcription elongation factor, GreA/GreB, conserved site (12.5%)" LNALPDVLEQFIHLR root 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0015986 (0.2%) GO:0042777 (0.1%)" "GO:0005886 (31.4%) GO:0045259 (31.3%) GO:0012505 (0.1%)" "GO:0046933 (31.5%) GO:0016787 (5.4%) GO:0046961 (0.1%)" "proton motive force-driven ATP synthesis (0.2%) proton motive force-driven plasma membrane ATP synthesis (0.1%)" "plasma membrane (31.4%) proton-transporting ATP synthase complex (31.3%) endomembrane system (0.1%)" "proton-transporting ATP synthase activity, rotational mechanism (31.5%) hydrolase activity (5.4%) proton-transporting ATPase activity, rotational mechanism (0.1%)" "IPR000711 (33.4%) IPR026015 (33.4%) IPR020781 (32.9%)" "ATPase, OSCP/delta subunit (33.4%) F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily (33.4%) ATPase, OSCP/delta subunit, conserved site (32.9%)" GLISYVTPPGGGTTDYAVDIYYSAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" AVIINADSKELPVLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0046813 (43.1%) GO:0006508 (6.9%)" GO:0009279 (43.1%) GO:0008233 (6.9%) "receptor-mediated virion attachment to host cell (43.1%) proteolysis (6.9%)" cell outer membrane (43.1%) peptidase activity (6.9%) "IPR009003 (24.8%) IPR011990 (24.8%) IPR019734 (24.8%)" "Peptidase S1, PA clan (24.8%) Tetratricopeptide-like helical domain superfamily (24.8%) Tetratricopeptide repeat (24.8%)" AAIEEGTVPGGGVAYIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" SLEVIANSLAGFNHSKYPWLEWDESSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006412 (20%) GO:0042274 (20%)" GO:0015935 (20%) "GO:0003735 (20%) GO:0019843 (20%)" "translation (20%) ribosomal small subunit biogenesis (20%)" small ribosomal subunit (20%) "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001912 (16.7%) IPR002942 (16.7%) IPR005709 (16.7%)" "Small ribosomal subunit protein uS4, N-terminal (16.7%) RNA-binding S4 domain (16.7%) Small ribosomal subunit protein uS4, bacteria (16.7%)" AYVFPGQGAQFVGMGKDLYDNNPLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004314 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) [acyl-carrier-protein] S-malonyltransferase activity (33.3%) "IPR001227 (14.3%) IPR004410 (14.3%) IPR014043 (14.3%)" "Acyl transferase domain superfamily (14.3%) Malonyl CoA-acyl carrier protein transacylase, FabD-type (14.3%) Acyl transferase domain (14.3%)" KVLTEEEQACDEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0005524 (24.6%) GO:0016887 (24.6%) GO:0051082 (24.6%)" "ATP binding (24.6%) ATP hydrolysis activity (24.6%) unfolded protein binding (24.6%)" "IPR001404 (14.3%) IPR003594 (14.3%) IPR019805 (14.3%)" "Heat shock protein Hsp90 family (14.3%) Histidine kinase/HSP90-like ATPase domain (14.3%) Heat shock protein Hsp90, conserved site (14.3%)" ASGYPLAFVAAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.5 (100%) carbamoyl-phosphate synthase (glutamine-hydrolyzing) (100%) "GO:0006541 (13.2%) GO:0006221 (12.9%) GO:0006526 (12.9%)" GO:0005737 (13.2%) "GO:0004088 (13.2%) GO:0005524 (13.2%) GO:0046872 (13.2%)" "glutamine metabolic process (13.2%) pyrimidine nucleotide biosynthetic process (12.9%) L-arginine biosynthetic process (12.9%)" cytoplasm (13.2%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.2%) ATP binding (13.2%) metal ion binding (13.2%)" "IPR005479 (10.1%) IPR005483 (10.1%) IPR011761 (10.1%)" "Carbamoyl phosphate synthase, ATP-binding domain (10.1%) Carbamoyl phosphate synthase, CPSase domain (10.1%) ATP-grasp fold (10.1%)" MKTFTAKPETVKR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (19.9%) GO:0017148 (19.9%) GO:0002181 (0%)" "GO:0022625 (19.9%) GO:0005840 (0.4%) GO:0005737 (0%)" "GO:0003735 (19.9%) GO:0003729 (19.9%) GO:0008270 (0%)" "translation (19.9%) negative regulation of translation (19.9%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (19.9%) ribosome (0.4%) cytoplasm (0%)" "structural constituent of ribosome (19.9%) mRNA binding (19.9%) zinc ion binding (0%)" "IPR005822 (25%) IPR005823 (25%) IPR036899 (25%)" "Large ribosomal subunit protein uL13 (25%) Large ribosomal subunit protein uL13, bacteria (25%) Large ribosomal subunit protein uL13 superfamily (25%)" IGAWGIGAMAPPFPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.3.3 (100%) N-acetylneuraminate lyase (100%) GO:0005737 (49.8%) "GO:0016829 (43.6%) GO:0008747 (6.6%)" cytoplasm (49.8%) "lyase activity (43.6%) N-acetylneuraminate lyase activity (6.6%)" "IPR002220 (50%) IPR013785 (50%)" "DapA-like (50%) Aldolase-type TIM barrel (50%)" VVVVEDLISTGGSSLK Bacteria Bacteria 2.4.2.10 (100%) orotate phosphoribosyltransferase (100%) "GO:0019856 (25.1%) GO:0044205 (25.1%) GO:0006222 (0.1%)" "GO:0004588 (25.1%) GO:0000287 (24.4%) GO:0016757 (0.1%)" "pyrimidine nucleobase biosynthetic process (25.1%) 'de novo' UMP biosynthetic process (25.1%) UMP biosynthetic process (0.1%)" "orotate phosphoribosyltransferase activity (25.1%) magnesium ion binding (24.4%) glycosyltransferase activity (0.1%)" "IPR000836 (24.9%) IPR004467 (24.9%) IPR023031 (24.9%)" "Phosphoribosyltransferase domain (24.9%) Orotate phosphoribosyl transferase domain (24.9%) Orotate phosphoribosyltransferase (24.9%)" VLLLDNLSDYIKPGMSVEAIQGIIASMK root GO:1903066 (0.2%) "GO:0005829 (99%) GO:0005886 (0.2%) GO:0051286 (0.2%)" "GO:0015297 (0.2%) GO:0042910 (0.2%)" regulation of protein localization to cell tip (0.2%) "cytosol (99%) plasma membrane (0.2%) cell tip (0.2%)" "antiporter activity (0.2%) xenobiotic transmembrane transporter activity (0.2%)" "IPR007458 (50.4%) IPR053375 (49.4%) IPR002528 (0.1%)" "Protein of unknown function DUF496 (50.4%) UPF0265 domain-containing protein (49.4%) Multi antimicrobial extrusion protein (0.1%)" AVQEQVASEKAELAK root 2.7.3.9 (100%) phosphoenolpyruvate--protein phosphotransferase (100%) "GO:0009401 (19.7%) GO:0015764 (0.1%)" "GO:0005737 (19.6%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0016301 (20%) GO:0046872 (20%) GO:0008965 (19.9%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (19.7%) N-acetylglucosamine transport (0.1%)" "cytoplasm (19.6%) cytosol (0.1%) membrane (0.1%)" "kinase activity (20%) metal ion binding (20%) phosphoenolpyruvate-protein phosphotransferase activity (19.9%)" "IPR040442 (8.5%) IPR050499 (8.5%) IPR000121 (8.5%)" "Pyruvate kinase-like domain superfamily (8.5%) Phosphoenolpyruvate-dependent sugar PTS enzyme (8.5%) PEP-utilising enzyme, C-terminal (8.5%)" GALAHFIVIDKNR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.12.99.6 (100%) hydrogenase (acceptor) (100%) GO:0030313 (32%) "GO:0008901 (32%) GO:0016151 (32%) GO:0033748 (4%)" cell envelope (32%) "ferredoxin hydrogenase activity (32%) nickel cation binding (32%) hydrogenase (acceptor) activity (4%)" "IPR001501 (25%) IPR018194 (25%) IPR029014 (25%)" "Nickel-dependent hydrogenase, large subunit (25%) Nickel-dependent hydrogenase, large subunit, nickel binding site (25%) [NiFe]-hydrogenase, large subunit (25%)" TPAEVEAFAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.99.18 (90.3%) 4.1.1.21 (9.7%)" "5-(carboxyamino)imidazole ribonucleotide mutase (90.3%) phosphoribosylaminoimidazole carboxylase (9.7%)" GO:0006189 (29.6%) GO:0016020 (25.9%) "GO:0034023 (29.6%) GO:0016829 (14.8%)" 'de novo' IMP biosynthetic process (29.6%) membrane (25.9%) "5-(carboxyamino)imidazole ribonucleotide mutase activity (29.6%) lyase activity (14.8%)" "IPR000031 (33.3%) IPR024694 (33.3%) IPR033747 (33.3%)" "PurE domain (33.3%) PurE, prokaryotic type (33.3%) Class I PurE (33.3%)" ANIPGFRPGMVPMSLIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.5%) GO:0043335 (16.5%) GO:0051083 (16.5%)" "GO:0003755 (16.5%) GO:0043022 (16.5%) GO:0044183 (16.5%)" "protein transport (16.5%) protein unfolding (16.5%) 'de novo' cotranslational protein folding (16.5%)" "peptidyl-prolyl cis-trans isomerase activity (16.5%) ribosome binding (16.5%) protein folding chaperone (16.5%)" "IPR005215 (20.3%) IPR008881 (20.3%) IPR036611 (20.3%)" "Trigger factor (20.3%) Trigger factor, ribosome-binding, bacterial (20.3%) Trigger factor ribosome-binding domain superfamily (20.3%)" AQAVYDALVAEGVKESQLEK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006811 (21.6%) "GO:0009279 (23%) GO:0046930 (21.6%) GO:0016020 (12.2%)" GO:0015288 (21.6%) monoatomic ion transport (21.6%) "cell outer membrane (23%) pore complex (21.6%) membrane (12.2%)" porin activity (21.6%) "IPR006665 (18.6%) IPR036737 (17.9%) IPR050330 (17.9%)" "OmpA-like domain (18.6%) OmpA-like domain superfamily (17.9%) Bacterial Outer Membrane Structural/Functional (17.9%)" TAILSANYLAACFK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" TISGVYSSETKKDADFQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (16.7%) IPR006099 (16.7%) IPR006158 (16.7%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-binding domain (16.7%)" LESDTYPGLAAEDGYYTKR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) GO:0005975 (50%) GO:0004563 (50%) carbohydrate metabolic process (50%) beta-N-acetylhexosaminidase activity (50%) "IPR015882 (16.7%) IPR015883 (16.7%) IPR017853 (16.7%)" "Beta-hexosaminidase, bacterial type, N-terminal (16.7%) Glycoside hydrolase family 20, catalytic domain (16.7%) Glycoside hydrolase superfamily (16.7%)" EGYPEVAEAFKR Bacteria Bacteria "1.11.1.1 (96.9%) 1.14.13.81 (3.1%)" "NADH peroxidase (96.9%) magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (3.1%)" "GO:0005506 (50%) GO:0016491 (20.9%) GO:0004601 (18.9%)" "iron ion binding (50%) oxidoreductase activity (20.9%) peroxidase activity (18.9%)" "IPR003251 (12.6%) IPR009040 (12.6%) IPR009078 (12.6%)" "Rubrerythrin, diiron-binding domain (12.6%) Ferritin-like diiron domain (12.6%) Ferritin-like superfamily (12.6%)" DKATGKEQAIR root "GO:0042026 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (3.1%) GO:0070013 (0.1%)" "GO:0005524 (32.3%) GO:0140662 (32.3%) GO:0051082 (31.3%)" "protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (3.1%) intracellular organelle lumen (0.1%)" "ATP binding (32.3%) ATP-dependent protein folding chaperone (32.3%) unfolded protein binding (31.3%)" "IPR013126 (16.8%) IPR029047 (16.8%) IPR029048 (16.8%)" "Heat shock protein 70 family (16.8%) Heat shock protein 70kD, peptide-binding domain superfamily (16.8%) Heat shock protein 70kD, C-terminal domain superfamily (16.8%)" IFGLTAGLPVNLEGLVGPNGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" YTQSNSVCYVK root "2.1.2.3 (94.2%) 3.5.4.10 (5.8%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (94.2%) IMP cyclohydrolase (5.8%)" "GO:0006189 (24.9%) GO:0006177 (0%) GO:0044208 (0%)" "GO:0005829 (24.9%) GO:0005840 (0%) GO:0005886 (0%)" "GO:0003937 (24.9%) GO:0004643 (24.9%) GO:0042803 (0%)" "'de novo' IMP biosynthetic process (24.9%) GMP biosynthetic process (0%) 'de novo' AMP biosynthetic process (0%)" "cytosol (24.9%) ribosome (0%) plasma membrane (0%)" "IMP cyclohydrolase activity (24.9%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (24.9%) protein homodimerization activity (0%)" "IPR002695 (24.9%) IPR016193 (24.8%) IPR024051 (24.8%)" "Bifunctional purine biosynthesis protein PurH-like (24.9%) Cytidine deaminase-like (24.8%) AICAR transformylase, duplicated domain superfamily (24.8%)" VTQVKDLANDGYR root "GO:0006412 (24.8%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0022625 (24.8%) GO:0005840 (0.6%) GO:0005737 (0%)" "GO:0003735 (24.8%) GO:0019843 (24.8%)" "translation (24.8%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic large ribosomal subunit (24.8%) ribosome (0.6%) cytoplasm (0%)" "structural constituent of ribosome (24.8%) rRNA binding (24.8%)" "IPR009000 (25%) IPR019927 (25%) IPR000597 (24.7%)" "Translation protein, beta-barrel domain superfamily (25%) Large ribosomal subunit protein uL3, bacteria/organella (25%) Large ribosomal subunit protein uL3 (24.7%)" STEGNPVQLLQSLSHKR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.4.1.1 (100%) glycogen phosphorylase (100%) GO:0005975 (33.3%) "GO:0008184 (33.3%) GO:0030170 (33.3%)" carbohydrate metabolic process (33.3%) "glycogen phosphorylase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR000811 (25%) IPR011834 (25%) IPR024517 (25%)" "Glycosyl transferase, family 35 (25%) Alpha-glucan phosphorylase (25%) Glycogen phosphorylase, domain of unknown function DUF3417 (25%)" ALPYHAGMDSQVR Pseudomonadati Bacteria Pseudomonadati "5.6.2.4 (86.7%) 3.6.4.12 (13.3%)" "DNA 3'-5' helicase (86.7%) DNA helicase (13.3%)" "GO:0006281 (8.4%) GO:0006310 (8.4%) GO:0006260 (7.8%)" "GO:0005737 (8.4%) GO:0030894 (8.4%) GO:0043590 (8.4%)" "GO:0005524 (8.4%) GO:0009378 (8.4%) GO:0016787 (8.4%)" "DNA repair (8.4%) DNA recombination (8.4%) DNA replication (7.8%)" "cytoplasm (8.4%) replisome (8.4%) bacterial nucleoid (8.4%)" "ATP binding (8.4%) four-way junction helicase activity (8.4%) hydrolase activity (8.4%)" "IPR001650 (7.6%) IPR004589 (7.6%) IPR011545 (7.6%)" "Helicase, C-terminal domain-like (7.6%) DNA helicase, ATP-dependent, RecQ type (7.6%) DEAD/DEAH-box helicase domain (7.6%)" TKEFITIAK Bacteria Bacteria 2.6.1.52 (100%) phosphoserine transaminase (100%) "GO:0006412 (14.3%) GO:0006564 (7.1%)" "GO:0005840 (14.3%) GO:1990904 (14.3%) GO:0005737 (7.1%)" "GO:0003735 (14.3%) GO:0019843 (14.3%) GO:0004648 (7.1%)" "translation (14.3%) L-serine biosynthetic process (7.1%)" "ribosome (14.3%) ribonucleoprotein complex (14.3%) cytoplasm (7.1%)" "structural constituent of ribosome (14.3%) rRNA binding (14.3%) O-phospho-L-serine:2-oxoglutarate aminotransferase activity (7.1%)" "IPR002136 (16.7%) IPR013005 (16.7%) IPR023574 (16.7%)" "Large ribosomal subunit protein uL4 (16.7%) Large ribosomal subunit protein uL4-like (16.7%) Large ribosomal subunit protein uL4 domain superfamily (16.7%)" IDILVNNAGITK root "1.1.1.100 (99%) 1.1.1.36 (0.6%) 1.-.-.- (0.1%)" "3-oxoacyl-[acyl-carrier-protein] reductase (99%) acetoacetyl-CoA reductase (0.6%) Oxidoreductases (0.1%)" "GO:0006633 (27.6%) GO:0030497 (2.4%) GO:0006629 (1.3%)" "GO:0005737 (0.7%) GO:0005759 (0%) GO:0005829 (0%)" "GO:0004316 (29.5%) GO:0051287 (29.1%) GO:0048038 (3%)" "fatty acid biosynthetic process (27.6%) fatty acid elongation (2.4%) lipid metabolic process (1.3%)" "cytoplasm (0.7%) mitochondrial matrix (0%) cytosol (0%)" "3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (29.5%) NAD binding (29.1%) quinone binding (3%)" "IPR002347 (17.6%) IPR036291 (17.5%) IPR057326 (16.6%)" "Short-chain dehydrogenase/reductase SDR (17.6%) NAD(P)-binding domain superfamily (17.5%) Ketoreductase domain (16.6%)" SDEEGRALLAAFDFPFRK root "GO:0006412 (16.5%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (17%) GO:1990904 (16.4%) GO:0022625 (0.1%)" "GO:0000049 (16.5%) GO:0003735 (16.5%) GO:0019843 (16.5%)" "translation (16.5%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (17%) ribonucleoprotein complex (16.4%) cytosolic large ribosomal subunit (0.1%)" "tRNA binding (16.5%) structural constituent of ribosome (16.5%) rRNA binding (16.5%)" "IPR022803 (16.9%) IPR031309 (16.8%) IPR002132 (16.8%)" "Large ribosomal subunit protein uL5 domain superfamily (16.9%) Large ribosomal subunit protein uL5, C-terminal (16.8%) Large ribosomal subunit protein uL5 (16.8%)" MQVILKEDVVNLGYKDDIVTVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR000244 (14.3%) IPR009027 (14.3%) IPR020069 (14.3%)" "Large ribosomal subunit protein bL9 (14.3%) Large ribosomal subunit protein bL9/RNase H1, N-terminal (14.3%) Large ribosomal subunit protein bL9, C-terminal (14.3%)" NCNIFPGAVVAGIPQDMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.3.1.129 (100%) acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (100%) GO:0009245 (33.3%) GO:0016020 (33.3%) GO:0008780 (33.3%) lipid A biosynthetic process (33.3%) membrane (33.3%) acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity (33.3%) "IPR001451 (20%) IPR010137 (20%) IPR011004 (20%)" "Hexapeptide repeat (20%) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (20%) Trimeric LpxA-like superfamily (20%)" AVAAALEQMPR root "2.3.1.12 (99.3%) 2.3.1.- (0.7%) 2.3.-.- (0.1%)" "dihydrolipoyllysine-residue acetyltransferase (99.3%) Transferring groups other than amino-acyl groups (0.7%) Acyltransferases (0.1%)" "GO:0006086 (20.1%) GO:0006090 (0%) GO:0042867 (0%)" "GO:0005737 (20%) GO:0045254 (19.5%)" "GO:0031405 (20%) GO:0004742 (19.9%) GO:0016746 (0.3%)" "pyruvate decarboxylation to acetyl-CoA (20.1%) pyruvate metabolic process (0%) pyruvate catabolic process (0%)" "cytoplasm (20%) pyruvate dehydrogenase complex (19.5%)" "lipoic acid binding (20%) dihydrolipoyllysine-residue acetyltransferase activity (19.9%) acyltransferase activity (0.3%)" "IPR001078 (11.4%) IPR050743 (11.4%) IPR023213 (11.3%)" "2-oxoacid dehydrogenase acyltransferase, catalytic domain (11.4%) 2-oxoacid dehydrogenase family, E2 component (11.4%) Chloramphenicol acetyltransferase-like domain superfamily (11.3%)" NAVNPDFLPDEDKSTPQLDLLAR Bacteria Bacteria "2.7.1.95 (99.4%) 2.7.1.87 (0.6%)" "kanamycin kinase (99.4%) streptomycin 3''-kinase (0.6%)" "GO:0046677 (24.2%) GO:0019748 (0.1%)" "GO:0005524 (24.2%) GO:0046872 (19.8%) GO:0008910 (19.5%)" "response to antibiotic (24.2%) secondary metabolic process (0.1%)" "ATP binding (24.2%) metal ion binding (19.8%) kanamycin kinase activity (19.5%)" "IPR002575 (26.9%) IPR011009 (26.9%) IPR024165 (24%)" "Aminoglycoside phosphotransferase (26.9%) Protein kinase-like domain superfamily (26.9%) Aminoglycoside 3-phosphotransferase (24%)" GANEAIDFNDELR root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.2%) GO:0006418 (0.1%) GO:0034605 (0.1%)" "GO:0005829 (14.2%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0004824 (15.1%) GO:0000049 (14.2%) GO:0005524 (14.2%)" "lysyl-tRNA aminoacylation (14.2%) tRNA aminoacylation for protein translation (0.1%) cellular response to heat (0.1%)" "cytosol (14.2%) cytoplasm (0.1%) membrane (0.1%)" "lysine-tRNA ligase activity (15.1%) tRNA binding (14.2%) ATP binding (14.2%)" "IPR012340 (12%) IPR004365 (11.4%) IPR044136 (11.3%)" "Nucleic acid-binding, OB-fold (12%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (11.4%) Lysine-tRNA ligase, class II, N-terminal (11.3%)" GYFYGNIDAMFDQIHGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (24.8%) GO:0005829 (24.8%) "GO:0003937 (24.8%) GO:0004643 (24.8%) GO:0016740 (0.4%)" 'de novo' IMP biosynthetic process (24.8%) cytosol (24.8%) "IMP cyclohydrolase activity (24.8%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (24.8%) transferase activity (0.4%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" GQVEGMETSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0032790 (20.2%) GO:0005737 (19.7%) "GO:0003746 (20.2%) GO:0005525 (20.2%) GO:0003924 (19.7%)" ribosome disassembly (20.2%) cytoplasm (19.7%) "translation elongation factor activity (20.2%) GTP binding (20.2%) GTPase activity (19.7%)" "IPR000640 (6.3%) IPR005517 (6.3%) IPR014721 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translation elongation factor EFG/EF2, domain IV (6.3%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (6.3%)" VVINVFPSLDTSVCAASVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.11.1.24 (90%) 1.11.1.15 (10%)" "thioredoxin-dependent peroxiredoxin (90%) Transferred entry: 1.11.1.24, 1.11.1.25, 1.11.1.26, 1.11.1.27, 1.11.1.2and 1.11.1.29 (10%)" GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" GLAEDASDEEKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" SAVAAIEAAGGNVVKL Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (25%) "GO:0022625 (23.3%) GO:0005840 (1.7%) GO:1990904 (1.7%)" "GO:0003735 (25%) GO:0019843 (23.3%)" translation (25%) "cytosolic large ribosomal subunit (23.3%) ribosome (1.7%) ribonucleoprotein complex (1.7%)" "structural constituent of ribosome (25%) rRNA binding (23.3%)" "IPR001196 (20.5%) IPR021131 (20.5%) IPR036227 (20.5%)" "Large ribosomal subunit protein uL15, conserved site (20.5%) Large ribosomal subunit protein uL15/eL18 (20.5%) Large ribosomal subunit protein uL15/eL18 superfamily (20.5%)" VLPGNTLYELVHNDR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.1.1.336 (83.9%) 1.1.1.22 (9.7%) 1.1.1.136 (6.5%)" "UDP-N-acetyl-D-mannosamine dehydrogenase (83.9%) UDP-glucose 6-dehydrogenase (9.7%) UDP-N-acetylglucosamine 6-dehydrogenase (6.5%)" GO:0000271 (24.3%) "GO:0016628 (24.3%) GO:0051287 (24.3%) GO:0016616 (13.8%)" polysaccharide biosynthetic process (24.3%) "oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (24.3%) NAD binding (24.3%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (13.8%)" "IPR001732 (12.6%) IPR014026 (12.6%) IPR014027 (12.6%)" "UDP-glucose/GDP-mannose dehydrogenase, N-terminal (12.6%) UDP-glucose/GDP-mannose dehydrogenase, dimerisation (12.6%) UDP-glucose/GDP-mannose dehydrogenase, C-terminal (12.6%)" MEPADESFEGTLQFIDEVKGGNIPK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" RVFAYATHPIFSGNAANNLR root 2.7.6.1 (100%) ribose-phosphate diphosphokinase (100%) "GO:0006015 (11.2%) GO:0006164 (11.2%) GO:0009156 (10.8%)" "GO:0002189 (11.2%) GO:0005737 (11.2%) GO:0005829 (0%)" "GO:0000287 (11.2%) GO:0004749 (11.2%) GO:0016301 (11.1%)" "5-phosphoribose 1-diphosphate biosynthetic process (11.2%) purine nucleotide biosynthetic process (11.2%) ribonucleoside monophosphate biosynthetic process (10.8%)" "ribose phosphate diphosphokinase complex (11.2%) cytoplasm (11.2%) cytosol (0%)" "magnesium ion binding (11.2%) ribose phosphate diphosphokinase activity (11.2%) kinase activity (11.1%)" "IPR005946 (17%) IPR029057 (17%) IPR000836 (17%)" "Ribose-phosphate pyrophosphokinase (17%) Phosphoribosyltransferase-like (17%) Phosphoribosyltransferase domain (17%)" LGASVVGFSDSANTSLGK root 2.1.3.2 (100%) aspartate carbamoyltransferase (100%) "GO:0006520 (16.6%) GO:0006207 (16.4%) GO:0044205 (16.3%)" "GO:0005829 (16.7%) GO:0005737 (0.1%) GO:0009347 (0%)" "GO:0016597 (16.7%) GO:0004070 (16.4%) GO:0016743 (0.3%)" "amino acid metabolic process (16.6%) 'de novo' pyrimidine nucleobase biosynthetic process (16.4%) 'de novo' UMP biosynthetic process (16.3%)" "cytosol (16.7%) cytoplasm (0.1%) aspartate carbamoyltransferase complex (0%)" "amino acid binding (16.7%) aspartate carbamoyltransferase activity (16.4%) carboxyl- or carbamoyltransferase activity (0.3%)" "IPR006130 (20.2%) IPR006132 (20.2%) IPR036901 (20.2%)" "Aspartate/ornithine carbamoyltransferase (20.2%) Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (20.2%) Aspartate/ornithine carbamoyltransferase superfamily (20.2%)" IDYAASGGIHKPDGIVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.3.1.1 (100%) dihydrouracil dehydrogenase (NAD(+)) (100%) "GO:0006210 (13.9%) GO:0006212 (13.9%) GO:0044205 (11.9%)" GO:0005737 (13.9%) "GO:0002058 (13.9%) GO:0050661 (13.9%) GO:0004152 (12.9%)" "thymine catabolic process (13.9%) uracil catabolic process (13.9%) 'de novo' UMP biosynthetic process (11.9%)" cytoplasm (13.9%) "uracil binding (13.9%) NADP binding (13.9%) dihydroorotate dehydrogenase activity (12.9%)" "IPR005720 (33.3%) IPR012135 (33.3%) IPR013785 (33.3%)" "Dihydroorotate dehydrogenase, catalytic (33.3%) Dihydroorotate dehydrogenase, class 1/ 2 (33.3%) Aldolase-type TIM barrel (33.3%)" GITINTAHVEYETEKR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0070125 (1.5%) GO:0006414 (0.1%)" "GO:0005829 (17.6%) GO:0009507 (1.9%) GO:0005739 (1.5%)" "GO:0003746 (20.1%) GO:0003924 (19.9%) GO:0005525 (19.9%)" "mitochondrial translational elongation (1.5%) translational elongation (0.1%)" "cytosol (17.6%) chloroplast (1.9%) mitochondrion (1.5%)" "translation elongation factor activity (20.1%) GTPase activity (19.9%) GTP binding (19.9%)" "IPR000795 (8.5%) IPR027417 (8.5%) IPR050055 (8.5%)" "Translational (tr)-type GTP-binding domain (8.5%) P-loop containing nucleoside triphosphate hydrolase (8.5%) Elongation factor Tu GTPase (8.5%)" ELVSNAVDATQKLK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0005737 (1.4%) "GO:0005524 (24.4%) GO:0016887 (24.4%) GO:0051082 (24.4%)" cytoplasm (1.4%) "ATP binding (24.4%) ATP hydrolysis activity (24.4%) unfolded protein binding (24.4%)" "IPR001404 (17.3%) IPR020575 (17.3%) IPR036890 (17.2%)" "Heat shock protein Hsp90 family (17.3%) Heat shock protein Hsp90, N-terminal (17.3%) Histidine kinase/HSP90-like ATPase superfamily (17.2%)" IIECLTSGGPDGQLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003593 (25%) IPR003959 (25%) IPR027417 (25%)" "AAA+ ATPase domain (25%) ATPase, AAA-type, core (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" AAELTPAIPVTSPSTMPGYKEVAPDQVPANAIQMGAGR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR027823 (100%) Domain of unknown function DUF4468 with TBP-like fold (100%) GTFEVVAVKAPGFGDR Peptostreptococcales Bacteria Bacillati Bacillota Clostridia Peptostreptococcales 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (17.2%) GO:0005737 (16.2%) "GO:0005524 (17.2%) GO:0140662 (17.2%) GO:0016853 (16.2%)" protein refolding (17.2%) cytoplasm (16.2%) "ATP binding (17.2%) ATP-dependent protein folding chaperone (17.2%) isomerase activity (16.2%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR027409 (16.8%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like apical domain superfamily (16.8%)" KMSGAGMMDCK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (49.5%) GO:0003746 (50.5%) cytoplasm (49.5%) translation elongation factor activity (50.5%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" SLMDIIQQNKVEIENLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0034605 (19.5%) GO:0042026 (19.5%) GO:0006508 (1.1%)" GO:0005737 (19.5%) "GO:0005524 (19.5%) GO:0016887 (19.5%) GO:0008233 (1.1%)" "cellular response to heat (19.5%) protein refolding (19.5%) proteolysis (1.1%)" cytoplasm (19.5%) "ATP binding (19.5%) ATP hydrolysis activity (19.5%) peptidase activity (1.1%)" "IPR001270 (8.3%) IPR003593 (8.3%) IPR003959 (8.3%)" "ClpA/B family (8.3%) AAA+ ATPase domain (8.3%) ATPase, AAA-type, core (8.3%)" ILTNFLSADLPVESPFCVERPVKR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0042777 (17.9%) "GO:0005886 (17.9%) GO:0045259 (17.9%)" "GO:0005524 (17.9%) GO:0046933 (17.9%) GO:0016787 (10.3%)" proton motive force-driven plasma membrane ATP synthesis (17.9%) "plasma membrane (17.9%) proton-transporting ATP synthase complex (17.9%)" "ATP binding (17.9%) proton-transporting ATP synthase activity, rotational mechanism (17.9%) hydrolase activity (10.3%)" "IPR000131 (50%) IPR035968 (50%)" "ATP synthase, F1 complex, gamma subunit (50%) ATP synthase, F1 complex, gamma subunit superfamily (50%)" AEFEDVIETGMGITESVHGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "IPR027417 (33.7%) IPR050678 (33.3%) IPR015223 (33%)" "P-loop containing nucleoside triphosphate hydrolase (33.7%) DNA Partitioning ATPase (33.3%) ATPase MipZ (33%)" KILDEGQAGDNVGLLLR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0006414 (0.1%) "GO:0005829 (13.9%) GO:0032045 (7.5%) GO:0005737 (3.1%)" "GO:0003746 (17.4%) GO:0005525 (17.4%) GO:0003924 (16.8%)" translational elongation (0.1%) "cytosol (13.9%) guanyl-nucleotide exchange factor complex (7.5%) cytoplasm (3.1%)" "translation elongation factor activity (17.4%) GTP binding (17.4%) GTPase activity (16.8%)" "IPR004160 (8.5%) IPR009000 (8.5%) IPR009001 (8.5%)" "Translation elongation factor EFTu/EF1A, C-terminal (8.5%) Translation protein, beta-barrel domain superfamily (8.5%) Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (8.5%)" VDSYGSMVPISNVAAVTTPDAR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006415 (31.7%) GO:0006412 (1.9%)" GO:0005737 (32.9%) GO:0043023 (33.5%) "translational termination (31.7%) translation (1.9%)" cytoplasm (32.9%) ribosomal large subunit binding (33.5%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" TYGGHGEQMAVFASTTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006108 (35%) GO:0006099 (0.6%) GO:0006107 (0.6%)" "GO:0016615 (28%) GO:0016616 (28%) GO:0030060 (7%)" "malate metabolic process (35%) tricarboxylic acid cycle (0.6%) oxaloacetate metabolic process (0.6%)" "malate dehydrogenase activity (28%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (28%) L-malate dehydrogenase (NAD+) activity (7%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" LAFAEDIGDGDHTTLCCIPETAMGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.4.2.19 (100%) nicotinate-nucleotide diphosphorylase (carboxylating) (100%) "GO:0009435 (25%) GO:0034213 (25%)" GO:0005737 (25%) GO:0004514 (25%) "NAD+ biosynthetic process (25%) quinolinate catabolic process (25%)" cytoplasm (25%) nicotinate-nucleotide diphosphorylase (carboxylating) activity (25%) "IPR002638 (14.3%) IPR004393 (14.3%) IPR013785 (14.3%)" "Quinolinate phosphoribosyl transferase, C-terminal (14.3%) Nicotinate-nucleotide pyrophosphorylase (14.3%) Aldolase-type TIM barrel (14.3%)" IQMENTTSDYDKEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (16.7%) GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0016853 (16.7%) GO:0051082 (16.7%)" protein refolding (16.7%) cytoplasm (16.7%) "ATP binding (16.7%) isomerase activity (16.7%) unfolded protein binding (16.7%)" "IPR001844 (16.7%) IPR002423 (16.7%) IPR018370 (16.7%)" "Chaperonin Cpn60/GroEL (16.7%) Chaperonin Cpn60/GroEL/TCP-1 family (16.7%) Chaperonin Cpn60, conserved site (16.7%)" KDDTIPAIISHDE root 3.4.11.18 (100%) methionyl aminopeptidase (100%) GO:0006508 (19.5%) GO:0005829 (20.1%) "GO:0070006 (20.1%) GO:0004239 (20%) GO:0005506 (18.4%)" proteolysis (19.5%) cytosol (20.1%) "metalloaminopeptidase activity (20.1%) initiator methionyl aminopeptidase activity (20%) iron ion binding (18.4%)" "IPR036005 (25.7%) IPR000994 (25.2%) IPR002467 (24.6%)" "Creatinase/aminopeptidase-like (25.7%) Peptidase M24 (25.2%) Peptidase M24A, methionine aminopeptidase, subfamily 1 (24.6%)" SVMLQSLNNIR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0009295 (10.8%) GO:0005829 (10.7%) GO:0032993 (10.7%)" "GO:0046983 (11.4%) GO:0000976 (10.7%) GO:0001217 (10.7%)" "nucleoid (10.8%) cytosol (10.7%) protein-DNA complex (10.7%)" "protein dimerization activity (11.4%) transcription cis-regulatory region binding (10.7%) DNA-binding transcription repressor activity (10.7%)" "IPR027454 (21%) IPR054180 (21%) IPR001801 (19.4%)" "Histone-like protein H-NS, N-terminal (21%) DNA-binding protein H-NS-like, N-terminal domain (21%) DNA-binding protein H-NS-like (19.4%)" VLSSIADKLQAGERDLDEIITIAGQELNEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 6.3.2.1 (100%) pantoate--beta-alanine ligase (AMP-forming) (100%) GO:0015940 (24.9%) GO:0005829 (24.5%) "GO:0004592 (24.9%) GO:0005524 (24.5%) GO:0016874 (0.4%)" pantothenate biosynthetic process (24.9%) cytosol (24.5%) "pantoate-beta-alanine ligase activity (24.9%) ATP binding (24.5%) ligase activity (0.4%)" "IPR003721 (25.9%) IPR014729 (25.4%) IPR042176 (25.4%)" "Pantoate-beta-alanine ligase (25.9%) Rossmann-like alpha/beta/alpha sandwich fold (25.4%) Pantoate-beta-alanine ligase, C-terminal domain (25.4%)" DRFFLDPGHMSPMLYSVLALSGK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.6%) IPR005475 (12.6%) IPR009014 (12.6%)" "Transketolase, N-terminal (12.6%) Transketolase-like, pyrimidine-binding domain (12.6%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.6%)" ITLNMGVGEAIADKK root "GO:0006412 (16.6%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (16.9%) GO:1990904 (16.5%) GO:0022625 (0.1%)" "GO:0003735 (16.6%) GO:0019843 (16.5%) GO:0000049 (16.5%)" "translation (16.6%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (16.9%) ribonucleoprotein complex (16.5%) cytosolic large ribosomal subunit (0.1%)" "structural constituent of ribosome (16.6%) rRNA binding (16.5%) tRNA binding (16.5%)" "IPR022803 (16.7%) IPR031310 (16.7%) IPR002132 (16.6%)" "Large ribosomal subunit protein uL5 domain superfamily (16.7%) Large ribosomal subunit protein uL5, N-terminal (16.7%) Large ribosomal subunit protein uL5 (16.6%)" QSLAEFANILKEDPTVDVAIIGHTDK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0009279 (100%) cell outer membrane (100%) "IPR006664 (20%) IPR006665 (20%) IPR036737 (20%)" "Outer membrane protein, bacterial (20%) OmpA-like domain (20%) OmpA-like domain superfamily (20%)" SGEQTAVAQDSVAAHLR root 6.1.1.21 (100%) histidine--tRNA ligase (100%) "GO:0006427 (24.8%) GO:0006418 (0.4%)" "GO:0005737 (24.7%) GO:0005829 (0%)" "GO:0004821 (24.8%) GO:0005524 (24.3%) GO:0004812 (0.4%)" "histidyl-tRNA aminoacylation (24.8%) tRNA aminoacylation for protein translation (0.4%)" "cytoplasm (24.7%) cytosol (0%)" "histidine-tRNA ligase activity (24.8%) ATP binding (24.3%) aminoacyl-tRNA ligase activity (0.4%)" "IPR004154 (12.7%) IPR033656 (12.7%) IPR036621 (12.7%)" "Anticodon-binding (12.7%) Histidyl-anticodon-binding (12.7%) Anticodon-binding domain superfamily (12.7%)" TNNFKDAYTPWMSVFTEAPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" QYSELEEEWKAEK root "GO:0034605 (17%) GO:0042026 (16%) GO:0006508 (0.2%)" "GO:0005829 (15.6%) GO:0005737 (1.4%) GO:0016020 (0%)" "GO:0005524 (17%) GO:0016887 (17%) GO:0042802 (15.6%)" "cellular response to heat (17%) protein refolding (16%) proteolysis (0.2%)" "cytosol (15.6%) cytoplasm (1.4%) membrane (0%)" "ATP binding (17%) ATP hydrolysis activity (17%) identical protein binding (15.6%)" "IPR027417 (8.6%) IPR050130 (8.5%) IPR041546 (8.5%)" "P-loop containing nucleoside triphosphate hydrolase (8.6%) ATP-dependent Clp protease/Chaperone ClpA/ClpB (8.5%) ClpA/ClpB, AAA lid domain (8.5%)" SLIADKYGKEVADNTSILYGGSCKPSNAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.3.1.1 (100%) triose-phosphate isomerase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%) GO:0019563 (16.7%)" GO:0005829 (16.7%) GO:0004807 (16.7%) "gluconeogenesis (16.7%) glycolytic process (16.7%) glycerol catabolic process (16.7%)" cytosol (16.7%) triose-phosphate isomerase activity (16.7%) "IPR000652 (20%) IPR013785 (20%) IPR020861 (20%)" "Triosephosphate isomerase (20%) Aldolase-type TIM barrel (20%) Triosephosphate isomerase, active site (20%)" ALADITMVGNNYK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.-.- (100%) Acting on peptide bonds (peptidases) (100%) GO:0006508 (33.3%) GO:0005829 (33.3%) GO:0008237 (33.3%) proteolysis (33.3%) cytosol (33.3%) metallopeptidase activity (33.3%) "IPR002510 (13.1%) IPR025502 (13.1%) IPR035068 (13.1%)" "Metalloprotease TldD/E, N-terminal domain (13.1%) TldD (13.1%) Metalloprotease TldD/PmbA, N-terminal (13.1%)" MLQEAVDSLFDNSRK root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) "GO:0000428 (16.9%) GO:0031981 (0%)" "GO:0003677 (16.9%) GO:0003899 (16.9%) GO:0000287 (15.7%)" DNA-templated transcription (16.9%) "DNA-directed RNA polymerase complex (16.9%) nuclear lumen (0%)" "DNA binding (16.9%) DNA-directed RNA polymerase activity (16.9%) magnesium ion binding (15.7%)" "IPR007080 (9.1%) IPR045867 (9.1%) IPR006592 (9.1%)" "RNA polymerase Rpb1, domain 1 (9.1%) DNA-directed RNA polymerase, subunit beta-prime (9.1%) RNA polymerase, N-terminal (9.1%)" NQRPELWDIYNAR Bacteria Bacteria 2.7.7.4 (100%) sulfate adenylyltransferase (100%) "GO:0000103 (26%) GO:0070814 (21.2%)" "GO:0005524 (26.3%) GO:0004781 (26%) GO:0016779 (0.5%)" "sulfate assimilation (26%) hydrogen sulfide biosynthetic process (21.2%)" "ATP binding (26.3%) sulfate adenylyltransferase (ATP) activity (26%) nucleotidyltransferase activity (0.5%)" "IPR002500 (25.1%) IPR014729 (25.1%) IPR050128 (25.1%)" "Phosphoadenosine phosphosulphate reductase domain (25.1%) Rossmann-like alpha/beta/alpha sandwich fold (25.1%) Sulfate adenylyltransferase subunit 2 (25.1%)" SAPMQPATTQK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR032265 (100%) Protein of unknown function DUF4831 (100%) FGSVRDEVNELAEELGADVVVIGSR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006950 (14.3%) GO:1902021 (14.3%)" GO:0005737 (14.3%) "GO:0004017 (14.3%) GO:0004672 (14.3%) GO:0042803 (14.3%)" "response to stress (14.3%) regulation of bacterial-type flagellum-dependent cell motility (14.3%)" cytoplasm (14.3%) "AMP kinase activity (14.3%) protein kinase activity (14.3%) protein homodimerization activity (14.3%)" "IPR006016 (33.5%) IPR014729 (33.5%) IPR006015 (33%)" "UspA (33.5%) Rossmann-like alpha/beta/alpha sandwich fold (33.5%) Universal stress protein A family (33%)" NLVHSGLVANANLDQVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001706 (25%) IPR018265 (25%) IPR021137 (25%)" "Large ribosomal subunit protein bL35 (25%) Large ribosomal subunit protein bL35, conserved site (25%) Large ribosomal subunit protein bL35-like (25%)" LLGTEGLETVTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" AGDTVSAGDWLGEVDENFQPHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) GO:0042777 (23.6%) "GO:0005524 (23.6%) GO:0046933 (23.6%) GO:0046961 (23.6%)" proton motive force-driven plasma membrane ATP synthesis (23.6%) "ATP binding (23.6%) proton-transporting ATP synthase activity, rotational mechanism (23.6%) proton-transporting ATPase activity, rotational mechanism (23.6%)" "IPR000194 (14.3%) IPR004100 (14.3%) IPR020003 (14.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (14.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain (14.3%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (14.3%)" KVHIGTDEYSNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.2.1.52 (100%) beta-N-acetylhexosaminidase (100%) GO:0005975 (50%) GO:0004563 (50%) carbohydrate metabolic process (50%) beta-N-acetylhexosaminidase activity (50%) "IPR015882 (16.6%) IPR015883 (16.6%) IPR017853 (16.6%)" "Beta-hexosaminidase, bacterial type, N-terminal (16.6%) Glycoside hydrolase family 20, catalytic domain (16.6%) Glycoside hydrolase superfamily (16.6%)" EMLIADGIDPNELLNSLAAVK Bacteria Bacteria "GO:0006355 (0.1%) GO:0006417 (0.1%) GO:0036386 (0.1%)" "GO:0005829 (10.7%) GO:0032993 (10.7%) GO:0009295 (10.4%)" "GO:0000976 (10.7%) GO:0001217 (10.7%) GO:0003680 (10.7%)" "regulation of DNA-templated transcription (0.1%) regulation of translation (0.1%) bacterial nucleoid DNA packaging (0.1%)" "cytosol (10.7%) protein-DNA complex (10.7%) nucleoid (10.4%)" "transcription cis-regulatory region binding (10.7%) DNA-binding transcription repressor activity (10.7%) minor groove of adenine-thymine-rich DNA binding (10.7%)" "IPR027454 (20.4%) IPR054180 (20.4%) IPR001801 (20.1%)" "Histone-like protein H-NS, N-terminal (20.4%) DNA-binding protein H-NS-like, N-terminal domain (20.4%) DNA-binding protein H-NS-like (20.1%)" NLTCIFVDHGMLR Bacteria Bacteria 6.3.5.2 (100%) GMP synthase (glutamine-hydrolyzing) (100%) GO:0006177 (0.1%) GO:0005829 (33.3%) "GO:0003921 (33.3%) GO:0005524 (33.3%) GO:0016740 (0.1%)" GMP biosynthetic process (0.1%) cytosol (33.3%) "GMP synthase activity (33.3%) ATP binding (33.3%) transferase activity (0.1%)" "IPR025777 (12.6%) IPR017926 (12.6%) IPR022310 (12.6%)" "GMP synthetase ATP pyrophosphatase domain (12.6%) Glutamine amidotransferase (12.6%) NAD/GMP synthase (12.6%)" EFADNLDSDFK root "GO:0006412 (19.9%) GO:0000028 (0%) GO:0002181 (0%)" "GO:0022627 (19.9%) GO:0005840 (0.5%) GO:1990904 (0.1%)" "GO:0019843 (20%) GO:0003735 (19.9%) GO:0003729 (19.5%)" "translation (19.9%) ribosomal small subunit assembly (0%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (19.9%) ribosome (0.5%) ribonucleoprotein complex (0.1%)" "rRNA binding (20%) structural constituent of ribosome (19.9%) mRNA binding (19.5%)" "IPR009019 (11.3%) IPR015946 (11.3%) IPR004044 (11.3%)" "K homology domain superfamily, prokaryotic type (11.3%) K homology domain-like, alpha/beta (11.3%) K Homology domain, type 2 (11.3%)" KGDEIAAVVLQVDAERER root "GO:0006412 (24.8%) GO:0000028 (0.1%) GO:0002181 (0%)" "GO:0022627 (24.7%) GO:0005840 (0.5%) GO:1990904 (0.1%)" "GO:0003735 (24.8%) GO:0003729 (24.8%) GO:0016491 (0.1%)" "translation (24.8%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0%)" "cytosolic small ribosomal subunit (24.7%) ribosome (0.5%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (24.8%) mRNA binding (24.8%) oxidoreductase activity (0.1%)" "IPR003029 (20.2%) IPR012340 (20.2%) IPR050437 (20.2%)" "S1 domain (20.2%) Nucleic acid-binding, OB-fold (20.2%) Small ribosomal subunit protein bS1-like (20.2%)" SREVVEQEYRDQGKDPATLDYVVPFK root 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.2%) GO:0006096 (14.2%) GO:0051156 (14.2%)" GO:0005829 (14.2%) "GO:0004347 (14.2%) GO:0048029 (14.2%) GO:0097367 (14.2%)" "gluconeogenesis (14.2%) glycolytic process (14.2%) glucose 6-phosphate metabolic process (14.2%)" cytosol (14.2%) "glucose-6-phosphate isomerase activity (14.2%) monosaccharide binding (14.2%) carbohydrate derivative binding (14.2%)" "IPR001672 (17.3%) IPR035482 (17.3%) IPR046348 (17.3%)" "Phosphoglucose isomerase (PGI) (17.3%) Phosphoglucose isomerase, SIS domain 2 (17.3%) SIS domain superfamily (17.3%)" DGNKDVAVVVAGDKTLEVAKDYINNSVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola SKCSADETPVCCCMDVGTIMDNSDCTASYSR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales GO:0005829 (100%) cytosol (100%) "IPR005272 (50%) IPR035571 (50%)" "Protein of unknown function DUF406 (50%) UPF0234-like, C-terminal (50%)" LLNELEQLNLRK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.1.6.- (100%) Sulfuric ester hydrolases (100%) "GO:0004065 (78.6%) GO:0016740 (21.4%)" "arylsulfatase activity (78.6%) transferase activity (21.4%)" "IPR000917 (25%) IPR017850 (25%) IPR024607 (25%)" "Sulfatase, N-terminal (25%) Alkaline-phosphatase-like, core domain superfamily (25%) Sulfatase, conserved site (25%)" EKIDMEAAGEAPANK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.1%) "GO:0022627 (32.3%) GO:0005840 (1.5%)" GO:0003735 (33.1%) translation (33.1%) "cytosolic small ribosomal subunit (32.3%) ribosome (1.5%)" structural constituent of ribosome (33.1%) "IPR001865 (25.3%) IPR023591 (25.3%) IPR005706 (24.7%)" "Small ribosomal subunit protein uS2 (25.3%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.3%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (24.7%)" NSGYMFITGPDVVK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.-.-.- (100%) Ligases (100%) GO:0015977 (24.2%) GO:0009317 (24.2%) "GO:0004658 (25%) GO:0003989 (24.2%) GO:0016740 (2.3%)" carbon fixation (24.2%) acetyl-CoA carboxylase complex (24.2%) "propionyl-CoA carboxylase activity (25%) acetyl-CoA carboxylase activity (24.2%) transferase activity (2.3%)" "IPR011762 (20.1%) IPR029045 (20.1%) IPR034733 (20.1%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20.1%) ClpP/crotonase-like domain superfamily (20.1%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.1%)" LLIKEEGILAGIEVAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.2.19 (100%) nicotinate-nucleotide diphosphorylase (carboxylating) (100%) "GO:0009435 (25%) GO:0034213 (25%)" GO:0005737 (25%) GO:0004514 (25%) "NAD+ biosynthetic process (25%) quinolinate catabolic process (25%)" cytoplasm (25%) nicotinate-nucleotide diphosphorylase (carboxylating) activity (25%) "IPR022412 (14.6%) IPR027277 (14.6%) IPR037128 (14.6%)" "Quinolinate phosphoribosyl transferase, N-terminal (14.6%) Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD (14.6%) Quinolinate phosphoribosyl transferase, N-terminal domain superfamily (14.6%)" YQQIAEFTNGIDFTTCDIAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006879 (20%) GO:0005829 (20%) "GO:0004322 (20%) GO:0008199 (20%) GO:0020037 (20%)" intracellular iron ion homeostasis (20%) cytosol (20%) "ferroxidase activity (20%) ferric iron binding (20%) heme binding (20%)" "IPR008331 (16.7%) IPR009040 (16.7%) IPR009078 (16.7%)" "Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%) Ferritin-like superfamily (16.7%)" ASFSIIPADGSYK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis DLDNCWSVVAEAIQTILRR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.3.2.2 (100%) adenylosuccinate lyase (100%) "GO:0006189 (25.2%) GO:0044208 (25.2%) GO:0006188 (5.1%)" "GO:0004018 (30.3%) GO:0070626 (13.7%) GO:0016829 (0.2%)" "'de novo' IMP biosynthetic process (25.2%) 'de novo' AMP biosynthetic process (25.2%) IMP biosynthetic process (5.1%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (30.3%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (13.7%) lyase activity (0.2%)" "IPR008948 (12.6%) IPR013539 (12.6%) IPR047136 (12.6%)" "L-Aspartase-like (12.6%) Adenylosuccinate lyase PurB, C-terminal (12.6%) Adenylosuccinate lyase PurB, bacteria (12.6%)" SALEVVLTVLHAGGK root "5.6.2.2 (99%) 5.99.1.3 (1%)" "DNA topoisomerase (ATP-hydrolyzing) (99%) Transferred entry: 5.6.2.2 (1%)" "GO:0006265 (12.6%) GO:0006261 (11.8%) GO:0032259 (0.3%)" "GO:0005694 (12.4%) GO:0005737 (11.8%)" "GO:0003677 (12.7%) GO:0005524 (12.7%) GO:0046872 (12.5%)" "DNA topological change (12.6%) DNA-templated DNA replication (11.8%) methylation (0.3%)" "chromosome (12.4%) cytoplasm (11.8%)" "DNA binding (12.7%) ATP binding (12.7%) metal ion binding (12.5%)" "IPR036890 (7.4%) IPR001241 (7.4%) IPR000565 (7.3%)" "Histidine kinase/HSP90-like ATPase superfamily (7.4%) DNA topoisomerase, type IIA (7.4%) DNA topoisomerase, type IIA, subunit B (7.3%)" EKIDEDFPQILQDLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" KAEETLSTALAR ATKDSLYLGIQCAVEGHR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.11.18 (100%) methionyl aminopeptidase (100%) GO:0006508 (20%) GO:0005829 (20%) "GO:0004239 (20%) GO:0046914 (20%) GO:0070006 (20%)" proteolysis (20%) cytosol (20%) "initiator methionyl aminopeptidase activity (20%) transition metal ion binding (20%) metalloaminopeptidase activity (20%)" "IPR000994 (25%) IPR001714 (25%) IPR002467 (25%)" "Peptidase M24 (25%) Peptidase M24, methionine aminopeptidase (25%) Peptidase M24A, methionine aminopeptidase, subfamily 1 (25%)" TMLYAINGGVDEK root 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (30.6%) GO:0005975 (0%) GO:0044814 (0%)" "GO:0005829 (31.9%) GO:0005737 (0.1%) GO:0005886 (0%)" "GO:0008861 (31.9%) GO:0016829 (4.8%) GO:0016746 (0.4%)" "glucose metabolic process (30.6%) carbohydrate metabolic process (0%) pyruvate fermentation via PFL (0%)" "cytosol (31.9%) cytoplasm (0.1%) plasma membrane (0%)" "formate C-acetyltransferase activity (31.9%) lyase activity (4.8%) acyltransferase activity (0.4%)" "IPR004184 (20.4%) IPR050244 (20.4%) IPR001150 (19.8%)" "Pyruvate formate lyase domain (20.4%) Autonomous Glycyl Radical Cofactor (20.4%) Glycine radical domain (19.8%)" MIELNNTINWKPQSTGTGR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.1.1.5 (100%) isoleucine--tRNA ligase (100%) GO:0006428 (14.5%) GO:0005737 (14.1%) "GO:0002161 (14.5%) GO:0004822 (14.5%) GO:0005524 (14.5%)" isoleucyl-tRNA aminoacylation (14.5%) cytoplasm (14.1%) "aminoacyl-tRNA deacylase activity (14.5%) isoleucine-tRNA ligase activity (14.5%) ATP binding (14.5%)" "IPR002300 (12.8%) IPR009008 (12.8%) IPR014729 (12.8%)" "Aminoacyl-tRNA synthetase, class Ia (12.8%) Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain (12.8%) Rossmann-like alpha/beta/alpha sandwich fold (12.8%)" THGQPASPTRLGK root "4.3.2.2 (99.9%) 1.8.1.4 (0.1%)" "adenylosuccinate lyase (99.9%) dihydrolipoyl dehydrogenase (0.1%)" "GO:0006189 (23.7%) GO:0044208 (23.7%) GO:0006188 (4.8%)" "GO:0004018 (28.5%) GO:0070626 (19%) GO:0016829 (0.2%)" "'de novo' IMP biosynthetic process (23.7%) 'de novo' AMP biosynthetic process (23.7%) IMP biosynthetic process (4.8%)" "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (28.5%) (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (19%) lyase activity (0.2%)" "IPR022761 (12.6%) IPR047136 (12.6%) IPR008948 (12.5%)" "Fumarate lyase, N-terminal (12.6%) Adenylosuccinate lyase PurB, bacteria (12.6%) L-Aspartase-like (12.5%)" AIEELNEAEYEGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0003723 (100%) RNA binding (100%) "IPR000504 (25%) IPR012677 (25%) IPR035979 (25%)" "RNA recognition motif domain (25%) Nucleotide-binding alpha-beta plait domain superfamily (25%) RNA-binding domain superfamily (25%)" IGTTGAIQPHINVGDVLVTTASVR root 2.4.2.3 (100%) uridine phosphorylase (100%) "GO:0009164 (20.4%) GO:0009166 (20.2%) GO:0044206 (17.7%)" "GO:0005829 (20.5%) GO:0032991 (0%)" "GO:0004850 (20.5%) GO:0016757 (0.3%) GO:0005524 (0%)" "nucleoside catabolic process (20.4%) nucleotide catabolic process (20.2%) UMP salvage (17.7%)" "cytosol (20.5%) protein-containing complex (0%)" "uridine phosphorylase activity (20.5%) glycosyltransferase activity (0.3%) ATP binding (0%)" "IPR000845 (25.1%) IPR035994 (25.1%) IPR018016 (25%)" "Nucleoside phosphorylase domain (25.1%) Nucleoside phosphorylase superfamily (25.1%) Nucleoside phosphorylase, conserved site (25%)" VGFEAAAPMLIIGAHR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.5 (100%) argininosuccinate synthase (100%) "GO:0000050 (16.5%) GO:0000053 (16.5%) GO:0006526 (16.5%)" GO:0005737 (16.5%) "GO:0004055 (16.5%) GO:0005524 (16.5%) GO:0016740 (1%)" "urea cycle (16.5%) argininosuccinate metabolic process (16.5%) L-arginine biosynthetic process (16.5%)" cytoplasm (16.5%) "argininosuccinate synthase activity (16.5%) ATP binding (16.5%) transferase activity (1%)" "IPR001518 (14.4%) IPR024074 (14.4%) IPR048268 (14.4%)" "Argininosuccinate synthase (14.4%) Argininosuccinate synthetase, catalytic/multimerisation domain body (14.4%) Arginosuccinate synthase C-terminal domain (14.4%)" SVLESVNSAEANKDSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR053994 (100%) NigD-like, OB domain (100%) SKIFDFVKPGVITGDDVQK root "4.1.2.13 (99.9%) 4.1.2.- (0.1%)" "fructose-bisphosphate aldolase (99.9%) Aldehyde-lyases (0.1%)" "GO:0006096 (19.9%) GO:0006094 (19.9%)" GO:0005829 (19.9%) "GO:0004332 (20.1%) GO:0008270 (19.9%) GO:0016829 (0.2%)" "glycolytic process (19.9%) gluconeogenesis (19.9%)" cytosol (19.9%) "fructose-bisphosphate aldolase activity (20.1%) zinc ion binding (19.9%) lyase activity (0.2%)" "IPR000771 (33.3%) IPR006411 (33.3%) IPR013785 (33.3%)" "Fructose-bisphosphate aldolase, class-II (33.3%) Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype (33.3%) Aldolase-type TIM barrel (33.3%)" VINEPFAVINADDFYGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0016740 (90.9%) GO:0016301 (9.1%)" "transferase activity (90.9%) kinase activity (9.1%)" "IPR029044 (78.8%) IPR005835 (21.2%)" "Nucleotide-diphospho-sugar transferases (78.8%) Nucleotidyl transferase domain (21.2%)" AGLELYLGSYPITPATDILHELAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.-.- (75%) 1.2.7.3 (25%)" "Acting on the aldehyde or oxo group of donors (75%) 2-oxoglutarate synthase (25%)" GO:0006979 (50%) "GO:0016903 (49.1%) GO:0047553 (0.9%)" response to oxidative stress (50%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors (49.1%) 2-oxoglutarate synthase activity (0.9%)" "IPR002869 (12.6%) IPR002880 (12.6%) IPR009014 (12.6%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.6%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.6%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.6%)" EVIKEVPSAAEVAIFFK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006811 (21.5%) "GO:0009279 (23.1%) GO:0046930 (21.5%) GO:0016020 (12.3%)" GO:0015288 (21.5%) monoatomic ion transport (21.5%) "cell outer membrane (23.1%) pore complex (21.5%) membrane (12.3%)" porin activity (21.5%) "IPR006665 (18.3%) IPR050330 (18.3%) IPR027385 (17.5%)" "OmpA-like domain (18.3%) Bacterial Outer Membrane Structural/Functional (18.3%) Outer membrane protein, beta-barrel domain (17.5%)" YQSVTADTLNEGLAFLETLEAPYVLK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0006189 (20%) GO:0009113 (20%)" "GO:0004637 (20%) GO:0005524 (20%) GO:0046872 (20%)" "'de novo' IMP biosynthetic process (20%) purine nucleobase biosynthetic process (20%)" "phosphoribosylamine-glycine ligase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR000115 (11.1%) IPR011054 (11.1%) IPR011761 (11.1%)" "Phosphoribosylglycinamide synthetase (11.1%) Rudiment single hybrid motif (11.1%) ATP-grasp fold (11.1%)" EKGQFETYKIEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0009060 (25%) GO:0022904 (25%)" "GO:0009055 (25%) GO:0051537 (25%)" "aerobic respiration (25%) respiratory electron transport chain (25%)" "electron transfer activity (25%) 2 iron, 2 sulfur cluster binding (25%)" "IPR006058 (14.3%) IPR009051 (14.3%) IPR012675 (14.3%)" "2Fe-2S ferredoxin, iron-sulphur binding site (14.3%) Alpha-helical ferredoxin (14.3%) Beta-grasp domain superfamily (14.3%)" GKGSPEGFVAPVTPGR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (20.1%) GO:0022625 (20.1%) "GO:0003735 (20.1%) GO:0019843 (20.1%) GO:0000049 (19.5%)" translation (20.1%) cytosolic large ribosomal subunit (20.1%) "structural constituent of ribosome (20.1%) rRNA binding (20.1%) tRNA binding (19.5%)" "IPR000114 (20%) IPR016180 (20%) IPR020798 (20%)" "Large ribosomal subunit protein uL16, bacteria (20%) Large ribosomal subunit protein uL16 domain (20%) Large ribosomal subunit protein uL16, conserved site (20%)" SLGIDPVGDSYYHPFEAYHMER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.11.24 (100%) aminopeptidase S (100%) GO:0006508 (41.7%) "GO:0008235 (41.7%) GO:0004177 (16.7%)" proteolysis (41.7%) "metalloexopeptidase activity (41.7%) aminopeptidase activity (16.7%)" "IPR007484 (50%) IPR045175 (50%)" "Peptidase M28 (50%) Peptidase M28 family (50%)" MKAELEAIHFFDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.3.3 (100%) N-acetylneuraminate lyase (100%) GO:0005737 (50%) "GO:0016829 (41.4%) GO:0008747 (8.6%)" cytoplasm (50%) "lyase activity (41.4%) N-acetylneuraminate lyase activity (8.6%)" "IPR002220 (50%) IPR013785 (50%)" "DapA-like (50%) Aldolase-type TIM barrel (50%)" VKTEGVITVEEAKGTETTVDVVEGMQFDR Bacteroidota Bacteria Pseudomonadati Bacteroidota 5.6.1.7 (100%) chaperonin ATPase (100%) GO:0042026 (18.4%) GO:0005737 (13.3%) "GO:0005524 (18.4%) GO:0016853 (18.4%) GO:0140662 (18.4%)" protein refolding (18.4%) cytoplasm (13.3%) "ATP binding (18.4%) isomerase activity (18.4%) ATP-dependent protein folding chaperone (18.4%)" "IPR001844 (17.6%) IPR002423 (17.6%) IPR027409 (17.6%)" "Chaperonin Cpn60/GroEL (17.6%) Chaperonin Cpn60/GroEL/TCP-1 family (17.6%) GroEL-like apical domain superfamily (17.6%)" ITQNQTSEDAFIFWNDDPIIKR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.2.9 (100%) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase (100%) "GO:0008360 (14.2%) GO:0009252 (14.2%) GO:0051301 (14.2%)" GO:0005737 (14.2%) "GO:0005524 (14.2%) GO:0008764 (14.2%) GO:0016874 (0.5%)" "regulation of cell shape (14.2%) peptidoglycan biosynthetic process (14.2%) cell division (14.2%)" cytoplasm (14.2%) "ATP binding (14.2%) UDP-N-acetylmuramoylalanine-D-glutamate ligase activity (14.2%) ligase activity (0.5%)" "IPR004101 (20%) IPR005762 (20%) IPR013221 (20%)" "Mur ligase, C-terminal (20%) UDP-N-acetylmuramoylalanine-D-glutamate ligase MurD (20%) Mur ligase, central (20%)" VVGYSQDYSNAIVEAVKK root "GO:0006865 (33.2%) GO:0015813 (0.1%) GO:0070778 (0.1%)" "GO:0005576 (33.2%) GO:0030288 (33.1%) GO:0016020 (0.1%)" "GO:0016595 (0.1%) GO:0070335 (0.1%)" "amino acid transport (33.2%) L-glutamate transmembrane transport (0.1%) L-aspartate transmembrane transport (0.1%)" "extracellular region (33.2%) outer membrane-bounded periplasmic space (33.1%) membrane (0.1%)" "glutamate binding (0.1%) aspartate binding (0.1%)" "IPR051455 (50.1%) IPR001638 (49.9%)" "Bacterial solute-binding protein 3 (50.1%) Solute-binding protein family 3/N-terminal domain of MltF (49.9%)" SVDVGTWIAGVGYRF root GO:0006508 (2.3%) "GO:0044384 (47.9%) GO:0009279 (47.3%) GO:0016020 (0.1%)" "GO:0008233 (2.3%) GO:0016740 (0.1%)" proteolysis (2.3%) "host outer membrane (47.9%) cell outer membrane (47.3%) membrane (0.1%)" "peptidase activity (2.3%) transferase activity (0.1%)" "IPR000758 (25.2%) IPR011250 (25%) IPR051723 (25%)" "Virulence-related outer membrane protein (25.2%) Outer membrane protein/outer membrane enzyme PagP, beta-barrel (25%) Bacterial Outer Membrane Invasion-Related Protein (25%)" SGVAHCTADNDMDCILK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (24%) GO:0009317 (24%) "GO:0003989 (24%) GO:0004658 (24%) GO:0016740 (4%)" carbon fixation (24%) acetyl-CoA carboxylase complex (24%) "acetyl-CoA carboxylase activity (24%) propionyl-CoA carboxylase activity (24%) transferase activity (4%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" FTPEQCHIDPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.6%) GO:0030388 (24.6%) GO:0005975 (0.5%)" "GO:0008270 (25.1%) GO:0004332 (24.6%) GO:0016832 (0.5%)" "glycolytic process (24.6%) fructose 1,6-bisphosphate metabolic process (24.6%) carbohydrate metabolic process (0.5%)" "zinc ion binding (25.1%) fructose-bisphosphate aldolase activity (24.6%) aldehyde-lyase activity (0.5%)" "IPR000771 (25.1%) IPR013785 (25.1%) IPR050246 (25.1%)" "Fructose-bisphosphate aldolase, class-II (25.1%) Aldolase-type TIM barrel (25.1%) Class II Fructose-bisphosphate Aldolase (25.1%)" TQDGDAYLAQK Bifidobacterium Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium GO:0051301 (50%) GO:0005737 (50%) cell division (50%) cytoplasm (50%) "IPR007793 (50%) IPR019933 (50%)" "DivIVA family (50%) DivIVA domain (50%)" GMINAVSFMVK Pseudomonadati Bacteria Pseudomonadati "GO:0006412 (31.3%) GO:0000027 (0.4%) GO:0002181 (0.4%)" "GO:0022625 (30.6%) GO:0005840 (4.3%) GO:0015934 (1.1%)" GO:0003735 (31.7%) "translation (31.3%) ribosomal large subunit assembly (0.4%) cytoplasmic translation (0.4%)" "cytosolic large ribosomal subunit (30.6%) ribosome (4.3%) large ribosomal subunit (1.1%)" structural constituent of ribosome (31.7%) "IPR005996 (25.1%) IPR016082 (25.1%) IPR036919 (25.1%)" "Large ribosomal subunit protein uL30, bacteria (25.1%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (25.1%) Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily (25.1%)" VYLFEDLRPTPEMSFAIRK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (24.2%) GO:0006166 (24.2%)" "GO:0000287 (24.2%) GO:0008973 (24.2%) GO:0004614 (3.2%)" "carbohydrate metabolic process (24.2%) purine ribonucleoside salvage (24.2%)" "magnesium ion binding (24.2%) phosphopentomutase activity (24.2%) phosphoglucomutase activity (3.2%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" NWDDFKGFLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.1 (72.7%) 1.2.7.- (27.3%)" "pyruvate synthase (72.7%) With an iron-sulfur protein as acceptor (27.3%)" "GO:0006979 (15%) GO:0022900 (15%) GO:0044281 (9.8%)" "GO:0005506 (15%) GO:0030976 (15%) GO:0051539 (15%)" "response to oxidative stress (15%) electron transport chain (15%) small molecule metabolic process (9.8%)" "iron ion binding (15%) thiamine pyrophosphate binding (15%) 4 iron, 4 sulfur cluster binding (15%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" QILAIGDKQTK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006355 (19.8%) GO:0000160 (1%)" "GO:0005829 (19.8%) GO:0032993 (19.8%)" "GO:0000156 (19.8%) GO:0000976 (19.8%)" "regulation of DNA-templated transcription (19.8%) phosphorelay signal transduction system (1%)" "cytosol (19.8%) protein-DNA complex (19.8%)" "phosphorelay response regulator activity (19.8%) transcription cis-regulatory region binding (19.8%)" "IPR001789 (17.3%) IPR001867 (17.3%) IPR011006 (17.3%)" "Signal transduction response regulator, receiver domain (17.3%) OmpR/PhoB-type DNA-binding domain (17.3%) CheY-like superfamily (17.3%)" EHTQDAHAILMDIK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0000160 (100%) phosphorelay signal transduction system (100%) "IPR001789 (50%) IPR011006 (50%)" "Signal transduction response regulator, receiver domain (50%) CheY-like superfamily (50%)" TADQGTNIQTPAQMAK root "1.3.5.1 (99%) 1.3.99.1 (1%)" "succinate dehydrogenase (99%) Deleted entry (1%)" "GO:0006099 (11.3%) GO:0009061 (11.3%) GO:0006113 (0.1%)" "GO:0005886 (10.1%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0046872 (11.3%) GO:0051537 (11.3%) GO:0051539 (11.3%)" "tricarboxylic acid cycle (11.3%) anaerobic respiration (11.3%) fermentation (0.1%)" "plasma membrane (10.1%) cytosol (0.1%) membrane (0.1%)" "metal ion binding (11.3%) 2 iron, 2 sulfur cluster binding (11.3%) 4 iron, 4 sulfur cluster binding (11.3%)" "IPR004489 (11.6%) IPR009051 (11.6%) IPR017896 (11.6%)" "Succinate dehydrogenase/fumarate reductase iron-sulphur protein (11.6%) Alpha-helical ferredoxin (11.6%) 4Fe-4S ferredoxin-type, iron-sulphur binding domain (11.6%)" KGEMNFDVVIASPDAMR root "GO:0006417 (16.6%) GO:0006412 (16.5%) GO:0000027 (0%)" "GO:0022625 (16.7%) GO:0005840 (0.2%) GO:0000428 (0%)" "GO:0000049 (16.6%) GO:0003735 (16.5%) GO:0019843 (16.5%)" "regulation of translation (16.6%) translation (16.5%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (16.7%) ribosome (0.2%) DNA-directed RNA polymerase complex (0%)" "tRNA binding (16.6%) structural constituent of ribosome (16.5%) rRNA binding (16.5%)" "IPR028364 (16.8%) IPR023674 (16.7%) IPR016095 (16.7%)" "Ribosomal protein uL1/ribosomal biogenesis protein (16.8%) Ribosomal protein uL1-like (16.7%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" QIDGIDEQLLELLAKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.4.99.5 (100%) chorismate mutase (100%) GO:0046417 (47.3%) "GO:0004106 (47.3%) GO:0003849 (3.6%) GO:0016740 (1.8%)" chorismate metabolic process (47.3%) "chorismate mutase activity (47.3%) 3-deoxy-7-phosphoheptulonate synthase activity (3.6%) transferase activity (1.8%)" "IPR002701 (16.7%) IPR006218 (16.7%) IPR013785 (16.7%)" "Chorismate mutase II, prokaryotic-type (16.7%) DAHP synthetase I/KDSA (16.7%) Aldolase-type TIM barrel (16.7%)" ELNISGPFNIQFLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "6.3.5.5 (97.7%) 6.3.4.16 (2.3%)" "carbamoyl-phosphate synthase (glutamine-hydrolyzing) (97.7%) carbamoyl-phosphate synthase (ammonia) (2.3%)" "GO:0006541 (13.5%) GO:0006221 (12.4%) GO:0006526 (12.4%)" GO:0005737 (13.5%) "GO:0004088 (13.5%) GO:0005524 (13.5%) GO:0046872 (13.5%)" "glutamine metabolic process (13.5%) pyrimidine nucleotide biosynthetic process (12.4%) L-arginine biosynthetic process (12.4%)" cytoplasm (13.5%) "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (13.5%) ATP binding (13.5%) metal ion binding (13.5%)" "IPR005479 (10%) IPR005480 (10%) IPR005483 (10%)" "Carbamoyl phosphate synthase, ATP-binding domain (10%) Carbamoyl-phosphate synthetase, large subunit oligomerisation domain (10%) Carbamoyl phosphate synthase, CPSase domain (10%)" VVVAEQNNGQFANYLR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "1.2.-.- (33.3%) 1.2.7.11 (33.3%) 1.2.7.3 (33.3%)" "Acting on the aldehyde or oxo group of donors (33.3%) 2-oxoacid oxidoreductase (ferredoxin) (33.3%) 2-oxoglutarate synthase (33.3%)" GO:0006979 (50%) GO:0016903 (50%) response to oxidative stress (50%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (50%) "IPR002869 (12.6%) IPR002880 (12.6%) IPR009014 (12.6%)" "Pyruvate-flavodoxin oxidoreductase, central domain (12.6%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (12.6%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.6%)" SEAWWPQLHSFAVGLPGSPDLK root 6.3.5.4 (100%) asparagine synthase (glutamine-hydrolyzing) (100%) "GO:0006529 (24.5%) GO:0070981 (0.3%) GO:0006541 (0.2%)" "GO:0005829 (24.7%) GO:0005737 (0.2%)" "GO:0004066 (24.7%) GO:0005524 (23.9%) GO:0016874 (0.6%)" "obsolete asparagine biosynthetic process (24.5%) L-asparagine biosynthetic process (0.3%) glutamine metabolic process (0.2%)" "cytosol (24.7%) cytoplasm (0.2%)" "asparagine synthase (glutamine-hydrolyzing) activity (24.7%) ATP binding (23.9%) ligase activity (0.6%)" "IPR001962 (14.8%) IPR014729 (14.8%) IPR050795 (14.8%)" "Asparagine synthase (14.8%) Rossmann-like alpha/beta/alpha sandwich fold (14.8%) Asparagine Synthetase (14.8%)" AGSPYAIKDYYDVDPDLATDVPGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.2.1.1 (100%) alpha-amylase (100%) GO:0009313 (48.9%) "GO:0004556 (48.9%) GO:0016787 (2.1%)" oligosaccharide catabolic process (48.9%) "alpha-amylase activity (48.9%) hydrolase activity (2.1%)" "IPR006047 (50%) IPR017853 (50%)" "Glycosyl hydrolase family 13, catalytic domain (50%) Glycoside hydrolase superfamily (50%)" SVGVESFQDEAGNIIYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0046872 (25%) GO:0070573 (25%)" proteolysis (25%) cytosol (25%) "metal ion binding (25%) metallodipeptidase activity (25%)" "IPR001160 (25%) IPR002933 (25%) IPR011650 (25%)" "Peptidase M20C, Xaa-His dipeptidase (25%) Peptidase M20 (25%) Peptidase M20, dimerisation domain (25%)" ECTLETLEEMLEKLEVVVNERR root "GO:0006355 (0.1%) GO:0045892 (0%) GO:0006417 (0%)" "GO:0009295 (11%) GO:0005829 (11%) GO:0032993 (11%)" "GO:0046983 (11.1%) GO:0000976 (11%) GO:0001217 (11%)" "regulation of DNA-templated transcription (0.1%) negative regulation of DNA-templated transcription (0%) regulation of translation (0%)" "nucleoid (11%) cytosol (11%) protein-DNA complex (11%)" "protein dimerization activity (11.1%) transcription cis-regulatory region binding (11%) DNA-binding transcription repressor activity (11%)" "IPR027454 (20.2%) IPR054180 (20.2%) IPR001801 (20%)" "Histone-like protein H-NS, N-terminal (20.2%) DNA-binding protein H-NS-like, N-terminal domain (20.2%) DNA-binding protein H-NS-like (20%)" ALQCGIVGLPNVGK root 3.6.1.3 (100%) Deleted entry (100%) GO:0005737 (20.2%) "GO:0005525 (20.3%) GO:0016887 (20.3%) GO:0005524 (20%)" cytoplasm (20.2%) "GTP binding (20.3%) ATP hydrolysis activity (20.3%) ATP binding (20%)" "IPR006073 (10.1%) IPR031167 (10.1%) IPR027417 (10.1%)" "GTP binding domain (10.1%) OBG-type guanine nucleotide-binding (G) domain (10.1%) P-loop containing nucleoside triphosphate hydrolase (10.1%)" SYAFYSIVIADSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" ESYTKEDLLASGR root "4.2.1.59 (50.9%) 5.3.3.14 (48.7%) 4.2.1.60 (0.4%)" "3-hydroxyacyl-[acyl-carrier-protein] dehydratase (50.9%) trans-2-decenoyl-[acyl-carrier-protein] isomerase (48.7%) Transferred entry: 4.2.1.59 (0.4%)" "GO:0006636 (24.1%) GO:0006633 (1%)" "GO:0005737 (24.3%) GO:0005829 (0%)" "GO:0019171 (25.1%) GO:0034017 (25%) GO:0016829 (0.3%)" "unsaturated fatty acid biosynthetic process (24.1%) fatty acid biosynthetic process (1%)" "cytoplasm (24.3%) cytosol (0%)" "(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (25.1%) trans-2-decenoyl-acyl-carrier-protein isomerase activity (25%) lyase activity (0.3%)" "IPR029069 (33.8%) IPR013114 (33.4%) IPR010083 (32.8%)" "HotDog domain superfamily (33.8%) Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ (33.4%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA (32.8%)" VGAGPFPTELFDETGKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.4.4 (100%) adenylosuccinate synthase (100%) "GO:0044208 (16.7%) GO:0046040 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0004019 (16.7%) GO:0005525 (16.7%)" "'de novo' AMP biosynthetic process (16.7%) IMP metabolic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) adenylosuccinate synthase activity (16.7%) GTP binding (16.7%)" "IPR001114 (14.3%) IPR018220 (14.3%) IPR027417 (14.3%)" "Adenylosuccinate synthetase (14.3%) Adenylosuccinate synthase, GTP-binding site (14.3%) P-loop containing nucleoside triphosphate hydrolase (14.3%)" KLVYTPEIFVVELSIDGNK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" TEYMVYEMYPQIKPCLPQK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.1.1 (100%) aspartate--ammonia ligase (100%) "GO:0070981 (24.5%) GO:0006529 (0.7%)" GO:0005829 (24.8%) "GO:0004071 (24.8%) GO:0005524 (24.5%) GO:0000166 (0.4%)" "L-asparagine biosynthetic process (24.5%) obsolete asparagine biosynthetic process (0.7%)" cytosol (24.8%) "aspartate-ammonia ligase activity (24.8%) ATP binding (24.5%) nucleotide binding (0.4%)" "IPR004618 (33.3%) IPR006195 (33.3%) IPR045864 (33.3%)" "Aspartate--ammonia ligase (33.3%) Aminoacyl-tRNA synthetase, class II (33.3%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (33.3%)" TKPHVNIGTIGHVDHGK root "3.6.5.3 (99.9%) 2.7.1.25 (0.1%) 1.10.2.2 (0%)" "protein-synthesizing GTPase (99.9%) adenylyl-sulfate kinase (0.1%) Transferred entry: 7.1.1.8 (0%)" "GO:0070125 (2.4%) GO:0006414 (0%) GO:0032790 (0%)" "GO:0005829 (14.9%) GO:0032045 (2.6%) GO:0005739 (2.4%)" "GO:0003746 (19.1%) GO:0003924 (19.1%) GO:0005525 (19.1%)" "mitochondrial translational elongation (2.4%) translational elongation (0%) ribosome disassembly (0%)" "cytosol (14.9%) guanyl-nucleotide exchange factor complex (2.6%) mitochondrion (2.4%)" "translation elongation factor activity (19.1%) GTPase activity (19.1%) GTP binding (19.1%)" "IPR027417 (8.7%) IPR000795 (8.7%) IPR050055 (8.5%)" "P-loop containing nucleoside triphosphate hydrolase (8.7%) Translational (tr)-type GTP-binding domain (8.7%) Elongation factor Tu GTPase (8.5%)" NADFVALTQAILDAAVANR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0005737 (50%) GO:0003746 (50%) cytoplasm (50%) translation elongation factor activity (50%) "IPR001816 (20%) IPR009060 (20%) IPR014039 (20%)" "Translation elongation factor EFTs/EF1B (20%) UBA-like superfamily (20%) Translation elongation factor EFTs/EF1B, dimerisation (20%)" NMVTGAAQMDGAIIVCAATDGPMPQTR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0006414 (0.1%) "GO:0005829 (16.2%) GO:0032045 (9.3%) GO:0005737 (0.1%)" "GO:0003746 (16.4%) GO:0003924 (16.4%) GO:0005525 (16.4%)" translational elongation (0.1%) "cytosol (16.2%) guanyl-nucleotide exchange factor complex (9.3%) cytoplasm (0.1%)" "translation elongation factor activity (16.4%) GTPase activity (16.4%) GTP binding (16.4%)" "IPR000795 (8.3%) IPR004160 (8.3%) IPR004161 (8.3%)" "Translational (tr)-type GTP-binding domain (8.3%) Translation elongation factor EFTu/EF1A, C-terminal (8.3%) Translation elongation factor EFTu-like, domain 2 (8.3%)" ELDLLTSNDLFLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005829 (50%) GO:0005524 (50%) cytosol (50%) ATP binding (50%) "IPR002716 (25%) IPR003714 (25%) IPR027417 (25%)" "PIN domain (25%) PhoH-like protein (25%) P-loop containing nucleoside triphosphate hydrolase (25%)" ISHPWLVTSCEWDNK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.6%) GO:0006044 (32.6%)" "GO:0004342 (32.6%) GO:0016853 (2.3%)" "carbohydrate metabolic process (32.6%) N-acetylglucosamine metabolic process (32.6%)" "glucosamine-6-phosphate deaminase activity (32.6%) isomerase activity (2.3%)" "IPR003737 (16.7%) IPR004547 (16.7%) IPR006148 (16.7%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (16.7%) Glucosamine-6-phosphate isomerase (16.7%) Glucosamine/galactosamine-6-phosphate isomerase (16.7%)" YRPETDMADLDNFDSAK root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.5%) GO:0006418 (0%)" "GO:0005829 (14.5%) GO:0005737 (0.1%) GO:0016020 (0%)" "GO:0000049 (14.5%) GO:0004824 (14.5%) GO:0005524 (14.5%)" "lysyl-tRNA aminoacylation (14.5%) tRNA aminoacylation for protein translation (0%)" "cytosol (14.5%) cytoplasm (0.1%) membrane (0%)" "tRNA binding (14.5%) lysine-tRNA ligase activity (14.5%) ATP binding (14.5%)" "IPR004364 (11.4%) IPR045864 (11.4%) IPR006195 (11.3%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (11.4%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.4%) Aminoacyl-tRNA synthetase, class II (11.3%)" QRGTEFHPGNNIGMGKDHTLFALVDGTVNFK YFATDRTDIHTLAEAIKDADVFLGLSK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (17.3%) "GO:0016746 (17.3%) GO:0046872 (17.3%) GO:0051287 (17.3%)" malate metabolic process (17.3%) "acyltransferase activity (17.3%) metal ion binding (17.3%) NAD binding (17.3%)" "IPR002505 (9.1%) IPR012188 (9.1%) IPR012301 (9.1%)" "Phosphate acetyl/butaryl transferase (9.1%) NAD(P)-dependent malic enzyme (9.1%) Malic enzyme, N-terminal domain (9.1%)" FYPEEEGKPVGIDKEDPAYEDAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%)" GO:0005829 (16.5%) "GO:0004618 (16.5%) GO:0005524 (16.5%) GO:0043531 (16.5%)" "gluconeogenesis (16.5%) glycolytic process (16.5%)" cytosol (16.5%) "phosphoglycerate kinase activity (16.5%) ATP binding (16.5%) ADP binding (16.5%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" FTSAYATLIR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.10 (84.6%) 5.4.2.2 (11.2%) 5.4.2.8 (4.2%)" "phosphoglucosamine mutase (84.6%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (11.2%) phosphomannomutase (4.2%)" "GO:0005975 (14.1%) GO:0006048 (14%) GO:0009252 (14%)" GO:0005829 (14%) "GO:0004615 (14%) GO:0008966 (14%) GO:0000287 (13.9%)" "carbohydrate metabolic process (14.1%) UDP-N-acetylglucosamine biosynthetic process (14%) peptidoglycan biosynthetic process (14%)" cytosol (14%) "phosphomannomutase activity (14%) phosphoglucosamine mutase activity (14%) magnesium ion binding (13.9%)" "IPR005844 (10.2%) IPR016055 (10.2%) IPR050060 (10.1%)" "Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (10.2%) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (10.2%) Phosphoglucosamine mutase (10.1%)" VKNVTTTEDIKNELAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis IPR038179 (100%) NigD-like, N-terminal domain superfamily (100%) LGTSAWYAPGAAGAYVVESIIHNQKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (26.3%) GO:0006099 (23.5%)" "GO:0004459 (26.3%) GO:0030060 (23%) GO:0016491 (0.5%)" "lactate metabolic process (26.3%) tricarboxylic acid cycle (23.5%)" "L-lactate dehydrogenase (NAD+) activity (26.3%) L-malate dehydrogenase (NAD+) activity (23%) oxidoreductase activity (0.5%)" "IPR015955 (17.2%) IPR022383 (17.2%) IPR001236 (16.9%)" "Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (17.2%) Lactate/malate dehydrogenase, C-terminal (17.2%) Lactate/malate dehydrogenase, N-terminal (16.9%)" MGHAGAIIAGGKGTADEKFAALEAAGVK root 6.2.1.5 (100%) succinate--CoA ligase (ADP-forming) (100%) "GO:0006099 (20%) GO:0006104 (0%) GO:0006086 (0%)" "GO:0009361 (19.9%) GO:0005829 (0.1%) GO:0042709 (0%)" "GO:0004775 (20%) GO:0004776 (20%) GO:0000166 (19.5%)" "tricarboxylic acid cycle (20%) succinyl-CoA metabolic process (0%) pyruvate decarboxylation to acetyl-CoA (0%)" "succinate-CoA ligase complex (ADP-forming) (19.9%) cytosol (0.1%) succinate-CoA ligase complex (0%)" "succinate-CoA ligase (ADP-forming) activity (20%) succinate-CoA ligase (GDP-forming) activity (20%) nucleotide binding (19.5%)" "IPR016102 (14.5%) IPR017440 (14.4%) IPR005811 (14.4%)" "Succinyl-CoA synthetase-like (14.5%) ATP-citrate lyase/succinyl-CoA ligase, active site (14.4%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.4%)" VSDSQSDQVER root 4.2.1.9 (100%) dihydroxy-acid dehydratase (100%) "GO:0009097 (15.8%) GO:0009099 (15.8%) GO:0008652 (0.2%)" GO:0005829 (17.7%) "GO:0004160 (17.6%) GO:0051537 (16%) GO:0000287 (15.3%)" "isoleucine biosynthetic process (15.8%) L-valine biosynthetic process (15.8%) amino acid biosynthetic process (0.2%)" cytosol (17.7%) "dihydroxy-acid dehydratase activity (17.6%) 2 iron, 2 sulfur cluster binding (16%) magnesium ion binding (15.3%)" "IPR000581 (17.5%) IPR020558 (17.4%) IPR037237 (17.4%)" "Dihydroxy-acid/6-phosphogluconate dehydratase, N-terminal (17.5%) Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site (17.4%) IlvD/EDD, N-terminal domain (17.4%)" LYNVVISDGAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.6 (100%) galactokinase (100%) GO:0006012 (20%) GO:0005829 (20%) "GO:0004335 (20%) GO:0005524 (20%) GO:0046872 (20%)" galactose metabolic process (20%) cytosol (20%) "galactokinase activity (20%) ATP binding (20%) metal ion binding (20%)" "IPR013750 (10.7%) IPR000705 (10.1%) IPR006203 (10.1%)" "GHMP kinase, C-terminal domain (10.7%) Galactokinase (10.1%) GHMP kinase, ATP-binding, conserved site (10.1%)" RLGIGLNAGHDLSLLNLNYFYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.6.99.2 (100%) pyridoxine 5'-phosphate synthase (100%) GO:0008615 (33.3%) GO:0005829 (33.3%) GO:0033856 (33.3%) pyridoxine biosynthetic process (33.3%) cytosol (33.3%) pyridoxine 5'-phosphate synthase activity (33.3%) "IPR004569 (33.3%) IPR013785 (33.3%) IPR036130 (33.3%)" "Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ (33.3%) Aldolase-type TIM barrel (33.3%) Pyridoxine 5'-phosphate synthase (33.3%)" TELAAAIEATTINKPSCPVYQNVSTK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.3.1.39 (100%) [acyl-carrier-protein] S-malonyltransferase (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004314 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) [acyl-carrier-protein] S-malonyltransferase activity (33.3%) "IPR001227 (14.3%) IPR004410 (14.3%) IPR014043 (14.3%)" "Acyl transferase domain superfamily (14.3%) Malonyl CoA-acyl carrier protein transacylase, FabD-type (14.3%) Acyl transferase domain (14.3%)" ITGIRPEFIQLDLKDKEGTR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.1.3.2 (100%) UDP-glucose 4-epimerase (100%) GO:0006012 (33.3%) GO:0005829 (33.3%) GO:0003978 (33.3%) galactose metabolic process (33.3%) cytosol (33.3%) UDP-glucose 4-epimerase activity (33.3%) "IPR005886 (33.3%) IPR036291 (33.3%) IPR001509 (30.3%)" "UDP-glucose 4-epimerase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD-dependent epimerase/dehydratase (30.3%)" AITSLGLAEAK Bacteria Bacteria GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" YLTPPSVDVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0022627 (25%) GO:0005840 (0.2%)" "GO:0003735 (25%) GO:0070181 (25%)" translation (25%) "cytosolic small ribosomal subunit (25%) ribosome (0.2%)" "structural constituent of ribosome (25%) small ribosomal subunit rRNA binding (25%)" "IPR001648 (33.3%) IPR018275 (33.3%) IPR036870 (33.3%)" "Small ribosomal subunit protein bS18 (33.3%) Small ribosomal subunit protein bS18, conserved site (33.3%) Small ribosomal subunit protein bS18 superfamily (33.3%)" VGTVTPNVAEAVK root "GO:0006417 (16.7%) GO:0006412 (16.5%) GO:0000027 (0%)" "GO:0022625 (16.8%) GO:0005840 (0.2%) GO:0000428 (0%)" "GO:0000049 (16.5%) GO:0003735 (16.5%) GO:0019843 (16.5%)" "regulation of translation (16.7%) translation (16.5%) ribosomal large subunit assembly (0%)" "cytosolic large ribosomal subunit (16.8%) ribosome (0.2%) DNA-directed RNA polymerase complex (0%)" "tRNA binding (16.5%) structural constituent of ribosome (16.5%) rRNA binding (16.5%)" "IPR028364 (16.8%) IPR023674 (16.8%) IPR016095 (16.7%)" "Ribosomal protein uL1/ribosomal biogenesis protein (16.8%) Ribosomal protein uL1-like (16.8%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" VIEIQHNVMTPQPYNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "3.2.1.- (91.3%) 3.2.1.49 (8.7%)" "Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (91.3%) alpha-N-acetylgalactosaminidase (8.7%)" GO:0005886 (0.4%) "GO:0000166 (49.8%) GO:0016798 (49%) GO:0008456 (0.8%)" plasma membrane (0.4%) "nucleotide binding (49.8%) hydrolase activity, acting on glycosyl bonds (49%) alpha-N-acetylgalactosaminidase activity (0.8%)" "IPR000683 (25%) IPR036291 (25%) IPR049303 (25%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (25%) NAD(P)-binding domain superfamily (25%) Glycosyl hydrolase 109, C-terminal domain (25%)" MGDIVLAGTSYGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0005737 (25%) "GO:0003743 (25.4%) GO:0005525 (25%) GO:0003924 (24.6%)" cytoplasm (25%) "translation initiation factor activity (25.4%) GTP binding (25%) GTPase activity (24.6%)" "IPR009000 (9.2%) IPR015760 (9.2%) IPR044145 (9.2%)" "Translation protein, beta-barrel domain superfamily (9.2%) Translation initiation factor IF- 2 (9.2%) Translation initiation factor IF-2, domain II (9.2%)" SLTCVQHPLDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.17.4.2 (98.3%) 1.1.98.6 (1.7%)" "ribonucleoside-triphosphate reductase (thioredoxin) (98.3%) ribonucleoside-triphosphate reductase (formate) (1.7%)" "GO:0006260 (16.7%) GO:0009265 (16.7%)" GO:0031250 (16.7%) "GO:0004748 (16.7%) GO:0005524 (16.7%) GO:0008998 (16.7%)" "DNA replication (16.7%) 2'-deoxyribonucleotide biosynthetic process (16.7%)" anaerobic ribonucleoside-triphosphate reductase complex (16.7%) "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (16.7%) ATP binding (16.7%) ribonucleoside-triphosphate reductase (thioredoxin) activity (16.7%)" "IPR005144 (50%) IPR012833 (50%)" "ATP-cone domain (50%) Ribonucleoside-triphosphate reductase, anaerobic (50%)" TVILQSHIDMVCEK root 3.4.13.18 (100%) cytosol non-specific dipeptidase (100%) "GO:0006508 (24.9%) GO:0043171 (0.6%)" GO:0005829 (24.9%) "GO:0046872 (24.9%) GO:0070573 (24.9%)" "proteolysis (24.9%) peptide catabolic process (0.6%)" cytosol (24.9%) "metal ion binding (24.9%) metallodipeptidase activity (24.9%)" "IPR001160 (33.6%) IPR002933 (33.6%) IPR011650 (32.8%)" "Peptidase M20C, Xaa-His dipeptidase (33.6%) Peptidase M20 (33.6%) Peptidase M20, dimerisation domain (32.8%)" SFFAANIEPSLAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR002931 (33.9%) IPR038765 (33.9%) IPR008969 (32.3%)" "Transglutaminase-like (33.9%) Papain-like cysteine peptidase superfamily (33.9%) Carboxypeptidase-like, regulatory domain superfamily (32.3%)" HFGALNILTCKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.1.1.40 (100%) malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (100%) GO:0006108 (16.8%) "GO:0016746 (18.4%) GO:0051287 (17.9%) GO:0046872 (16.8%)" malate metabolic process (16.8%) "acyltransferase activity (18.4%) NAD binding (17.9%) metal ion binding (16.8%)" "IPR002505 (9.5%) IPR036291 (9.5%) IPR042112 (9.5%)" "Phosphate acetyl/butaryl transferase (9.5%) NAD(P)-binding domain superfamily (9.5%) Phosphate acetyltransferase, domain 2 (9.5%)" MVPPPLAFEVLDAVMEK Bacteria Bacteria 4.1.2.13 (100%) fructose-bisphosphate aldolase (100%) "GO:0006096 (24.7%) GO:0030388 (24.7%) GO:0005975 (0.4%)" "GO:0008270 (25.1%) GO:0004332 (24.7%) GO:0016832 (0.4%)" "glycolytic process (24.7%) fructose 1,6-bisphosphate metabolic process (24.7%) carbohydrate metabolic process (0.4%)" "zinc ion binding (25.1%) fructose-bisphosphate aldolase activity (24.7%) aldehyde-lyase activity (0.4%)" "IPR000771 (25.1%) IPR013785 (25.1%) IPR050246 (25.1%)" "Fructose-bisphosphate aldolase, class-II (25.1%) Aldolase-type TIM barrel (25.1%) Class II Fructose-bisphosphate Aldolase (25.1%)" WLTPAYDAETQAEIK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.- (50%) 5.4.2.2 (50%)" "Phosphotransferases (phosphomutases) (50%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (50%)" "GO:0005975 (24.1%) GO:0006166 (24.1%)" "GO:0000287 (24.1%) GO:0008973 (24.1%) GO:0004614 (3.8%)" "carbohydrate metabolic process (24.1%) purine ribonucleoside salvage (24.1%)" "magnesium ion binding (24.1%) phosphopentomutase activity (24.1%) phosphoglucomutase activity (3.8%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" LLFRPGGHGALIENLNDLDADVIFIK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0016020 (10%) "GO:0016301 (70%) GO:0016779 (20%)" membrane (10%) "kinase activity (70%) nucleotidyltransferase activity (20%)" "IPR025393 (47.5%) IPR029044 (47.5%) IPR027417 (1.7%)" "Domain of unknown function DUF4301 (47.5%) Nucleotide-diphospho-sugar transferases (47.5%) P-loop containing nucleoside triphosphate hydrolase (1.7%)" LRPIVTLENVVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.2.7.1 (100%) pyruvate synthase (100%) "GO:0016903 (80%) GO:0019164 (13.3%) GO:0047553 (6.7%)" "oxidoreductase activity, acting on the aldehyde or oxo group of donors (80%) pyruvate synthase activity (13.3%) 2-oxoglutarate synthase activity (6.7%)" "IPR002869 (33.3%) IPR019752 (33.3%) IPR052554 (33.3%)" "Pyruvate-flavodoxin oxidoreductase, central domain (33.3%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (33.3%) 2-oxoglutarate synthase subunit KorC (33.3%)" ENMKKFTCVQDIGDLK ISAFDVILPEGIPYK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 6.3.2.6 (100%) phosphoribosylaminoimidazolesuccinocarboxamide synthase (100%) GO:0006189 (25%) GO:0005737 (25%) "GO:0004639 (25%) GO:0005524 (25%)" 'de novo' IMP biosynthetic process (25%) cytoplasm (25%) "phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (25%) ATP binding (25%)" "IPR018236 (47%) IPR028923 (47%) IPR001636 (6.1%)" "SAICAR synthetase, conserved site (47%) SAICAR synthetase/ADE2, N-terminal (47%) Phosphoribosylaminoimidazole-succinocarboxamide synthase (6.1%)" TTIDLGIHGLHPELIR Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.1.-.- (100%) Acting on ester bonds (100%) GO:0006402 (20.1%) "GO:0005886 (19.1%) GO:0016020 (1%)" "GO:0003723 (20.1%) GO:0016787 (19.6%) GO:0004521 (19.1%)" mRNA catabolic process (20.1%) "plasma membrane (19.1%) membrane (1%)" "RNA binding (20.1%) hydrolase activity (19.6%) RNA endonuclease activity (19.1%)" "IPR003607 (12.5%) IPR004087 (12.5%) IPR004088 (12.5%)" "HD/PDEase domain (12.5%) K Homology domain (12.5%) K Homology domain, type 1 (12.5%)" ITETTKTEMTGNEK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.6.2.1 (100%) DNA topoisomerase (100%) GO:0006265 (25.5%) "GO:0003677 (25.5%) GO:0003917 (25.5%) GO:0046872 (23.6%)" DNA topological change (25.5%) "DNA binding (25.5%) DNA topoisomerase type I (single strand cut, ATP-independent) activity (25.5%) metal ion binding (23.6%)" "IPR000380 (7.3%) IPR003602 (7.3%) IPR013497 (7.3%)" "DNA topoisomerase, type IA (7.3%) DNA topoisomerase, type IA, DNA-binding domain (7.3%) DNA topoisomerase, type IA, central (7.3%)" IEGVEHEFASVPGVKEDVTNIILNLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (16.9%) "GO:0000428 (16.9%) GO:0005737 (16.9%)" "GO:0003899 (16.9%) GO:0046983 (16.9%) GO:0003677 (15.7%)" DNA-templated transcription (16.9%) "DNA-directed RNA polymerase complex (16.9%) cytoplasm (16.9%)" "DNA-directed RNA polymerase activity (16.9%) protein dimerization activity (16.9%) DNA binding (15.7%)" "IPR011262 (17%) IPR011263 (17%) IPR036603 (17%)" "DNA-directed RNA polymerase, insert domain (17%) DNA-directed RNA polymerase, RpoA/D/Rpb3-type (17%) RNA polymerase, RBP11-like subunit (17%)" AEISKPTLIIGNTVMGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" HLVKEDGSQAQLDEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (24.6%) "GO:0022627 (24.1%) GO:0005840 (1.3%) GO:1990904 (0.5%)" "GO:0003729 (24.6%) GO:0003735 (24.6%) GO:0003676 (0.3%)" translation (24.6%) "cytosolic small ribosomal subunit (24.1%) ribosome (1.3%) ribonucleoprotein complex (0.5%)" "mRNA binding (24.6%) structural constituent of ribosome (24.6%) nucleic acid binding (0.3%)" "IPR003029 (25.1%) IPR012340 (25.1%) IPR035104 (24.8%)" "S1 domain (25.1%) Nucleic acid-binding, OB-fold (25.1%) Ribosomal protein S1-like (24.8%)" GEVVEPDPNGPTSLYFFK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0032790 (25%) "GO:0003746 (25%) GO:0003924 (25%) GO:0005525 (25%)" ribosome disassembly (25%) "translation elongation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000640 (7.1%) IPR000795 (7.1%) IPR005225 (7.1%)" "Elongation factor EFG, domain V-like (7.1%) Translational (tr)-type GTP-binding domain (7.1%) Small GTP-binding domain (7.1%)" LVLSPSNPYFFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005975 (66.7%) GO:0016787 (33.3%) carbohydrate metabolic process (66.7%) hydrolase activity (33.3%) "IPR008313 (33.3%) IPR008928 (33.3%) IPR012341 (33.3%)" "Metal-independent alpha-mannosidase (33.3%) Six-hairpin glycosidase superfamily (33.3%) Six-hairpin glycosidase-like superfamily (33.3%)" FFGVEAGKIDEALAGYTPR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 6.3.2.10 (100%) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (100%) "GO:0008360 (13.3%) GO:0009252 (13.3%) GO:0051301 (13.3%)" GO:0005737 (13.3%) "GO:0005524 (13.3%) GO:0047480 (13.3%) GO:0008766 (7.2%)" "regulation of cell shape (13.3%) peptidoglycan biosynthetic process (13.3%) cell division (13.3%)" cytoplasm (13.3%) "ATP binding (13.3%) UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity (13.3%) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity (7.2%)" "IPR000713 (12.5%) IPR004101 (12.5%) IPR005863 (12.5%)" "Mur ligase, N-terminal catalytic domain (12.5%) Mur ligase, C-terminal (12.5%) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (12.5%)" SVGPEQTIFR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.5.1.2 (100%) pyrroline-5-carboxylate reductase (100%) GO:0055129 (33.3%) GO:0005737 (33.3%) GO:0004735 (33.3%) L-proline biosynthetic process (33.3%) cytoplasm (33.3%) pyrroline-5-carboxylate reductase activity (33.3%) "IPR000304 (20%) IPR008927 (20%) IPR028939 (20%)" "Pyrroline-5-carboxylate reductase-like (20%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (20%) Pyrroline-5-carboxylate reductase, catalytic, N-terminal (20%)" TVHVSTYQAASGAGAAAMDELYEQYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.2.1.11 (100%) aspartate-semialdehyde dehydrogenase (100%) "GO:0009088 (11%) GO:0009089 (11%) GO:0009097 (11%)" "GO:0004073 (11.2%) GO:0046983 (11.2%) GO:0050661 (11%)" "threonine biosynthetic process (11%) lysine biosynthetic process via diaminopimelate (11%) isoleucine biosynthetic process (11%)" "aspartate-semialdehyde dehydrogenase activity (11.2%) protein dimerization activity (11.2%) NADP binding (11%)" "IPR012280 (18.7%) IPR000534 (18.5%) IPR005986 (18.5%)" "Semialdehyde dehydrogenase, dimerisation domain (18.7%) Semialdehyde dehydrogenase, NAD-binding (18.5%) Aspartate-semialdehyde dehydrogenase, beta-type (18.5%)" ITEQEAQEMVDHLVMK Bacteria Bacteria 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (28.3%) GO:0044814 (0.3%)" "GO:0005829 (33.1%) GO:0016020 (0.3%)" "GO:0008861 (33.1%) GO:0016829 (4.2%) GO:0016746 (0.8%)" "glucose metabolic process (28.3%) pyruvate fermentation via PFL (0.3%)" "cytosol (33.1%) membrane (0.3%)" "formate C-acetyltransferase activity (33.1%) lyase activity (4.2%) acyltransferase activity (0.8%)" "IPR004184 (21.9%) IPR050244 (21.9%) IPR001150 (18.8%)" "Pyruvate formate lyase domain (21.9%) Autonomous Glycyl Radical Cofactor (21.9%) Glycine radical domain (18.8%)" AYWDDGAQMIAPHDKNTIAEVNKIR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 5.4.2.2 (100%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (100%) "GO:0005975 (23.9%) GO:0006166 (23.9%)" "GO:0000287 (23.9%) GO:0008973 (23.9%) GO:0004614 (4.3%)" "carbohydrate metabolic process (23.9%) purine ribonucleoside salvage (23.9%)" "magnesium ion binding (23.9%) phosphopentomutase activity (23.9%) phosphoglucomutase activity (4.3%)" "IPR005841 (12.7%) IPR005844 (12.7%) IPR005845 (12.7%)" "Alpha-D-phosphohexomutase superfamily (12.7%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.7%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.7%)" DIPAEDIVSKDVFDAAVRGDK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 2.7.1.2 (100%) glucokinase (100%) "GO:0016301 (71.4%) GO:0004340 (28.6%)" "kinase activity (71.4%) glucokinase activity (28.6%)" "IPR000600 (34.1%) IPR049874 (34.1%) IPR043129 (31.8%)" "ROK family (34.1%) ROK, conserved site (34.1%) ATPase, nucleotide binding domain (31.8%)" VVKDNLFPVPPLFK root 6.3.3.1 (100%) phosphoribosylformylglycinamidine cyclo-ligase (100%) "GO:0006189 (16.6%) GO:0046084 (16.6%) GO:0006164 (0.2%)" GO:0005829 (16.6%) "GO:0004637 (16.6%) GO:0004641 (16.6%) GO:0005524 (16.6%)" "'de novo' IMP biosynthetic process (16.6%) adenine biosynthetic process (16.6%) purine nucleotide biosynthetic process (0.2%)" cytosol (16.6%) "phosphoribosylamine-glycine ligase activity (16.6%) phosphoribosylformylglycinamidine cyclo-ligase activity (16.6%) ATP binding (16.6%)" "IPR004733 (20%) IPR010918 (20%) IPR016188 (20%)" "Phosphoribosylformylglycinamidine cyclo-ligase (20%) PurM-like, C-terminal domain (20%) PurM-like, N-terminal domain (20%)" AVPVCGHLGLTPQSVNIFGGYK root 2.1.2.11 (100%) 3-methyl-2-oxobutanoate hydroxymethyltransferase (100%) "GO:0015940 (18%) GO:0032259 (13.9%)" "GO:0005737 (18%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003864 (18%) GO:0000287 (18%) GO:0008168 (13.9%)" "pantothenate biosynthetic process (18%) methylation (13.9%)" "cytoplasm (18%) cytosol (0%) membrane (0%)" "3-methyl-2-oxobutanoate hydroxymethyltransferase activity (18%) magnesium ion binding (18%) methyltransferase activity (13.9%)" "IPR003700 (33.4%) IPR015813 (33.3%) IPR040442 (33.3%)" "Ketopantoate hydroxymethyltransferase (33.4%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (33.3%) Pyruvate kinase-like domain superfamily (33.3%)" MVAPVDGTIGK root "2.7.1.199 (89.1%) 2.7.1.- (3.6%) 2.7.1.191 (3.6%)" "protein-N(pi)-phosphohistidine--D-glucose phosphotransferase (89.1%) Phosphotransferases with an alcohol group as acceptor (3.6%) protein-N(pi)-phosphohistidine--D-mannose phosphotransferase (3.6%)" "GO:0009401 (32.2%) GO:0034763 (0%) GO:0043610 (0%)" "GO:0005737 (32.1%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0016301 (32.2%) GO:0046872 (2.7%) GO:0016740 (0.3%)" "phosphoenolpyruvate-dependent sugar phosphotransferase system (32.2%) negative regulation of transmembrane transport (0%) regulation of carbohydrate utilization (0%)" "cytoplasm (32.1%) cytosol (0%) membrane (0%)" "kinase activity (32.2%) metal ion binding (2.7%) transferase activity (0.3%)" "IPR011055 (33.1%) IPR001127 (33.1%) IPR050890 (33%)" "Duplicated hybrid motif (33.1%) Phosphotransferase system, sugar-specific permease EIIA type 1 (33.1%) Phosphotransferase system EIIA component (33%)" GEWNVYDIIYTAPTFKEDGSYR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0016787 (92.3%) GO:0046872 (7.7%)" "hydrolase activity (92.3%) metal ion binding (7.7%)" IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) NKYDLCVLDVMMPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006355 (20%) "GO:0005829 (20%) GO:0032993 (20%)" "GO:0000156 (20%) GO:0000976 (20%)" regulation of DNA-templated transcription (20%) "cytosol (20%) protein-DNA complex (20%)" "phosphorelay response regulator activity (20%) transcription cis-regulatory region binding (20%)" "IPR001789 (17.7%) IPR001867 (17.7%) IPR011006 (17.7%)" "Signal transduction response regulator, receiver domain (17.7%) OmpR/PhoB-type DNA-binding domain (17.7%) CheY-like superfamily (17.7%)" GEDQLFEQLRPLVER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.1%) GO:0017038 (11.1%) GO:0043952 (11.1%)" "GO:0005829 (11.1%) GO:0005886 (11.1%) GO:0031522 (11.1%)" "GO:0005524 (11.1%) GO:0046872 (10.6%) GO:0008564 (0.3%)" "protein targeting (11.1%) protein import (11.1%) protein transport by the Sec complex (11.1%)" "cytosol (11.1%) plasma membrane (11.1%) cell envelope Sec protein transport complex (11.1%)" "ATP binding (11.1%) metal ion binding (10.6%) protein-exporting ATPase activity (0.3%)" "IPR000185 (7.9%) IPR011115 (7.9%) IPR014001 (7.9%)" "Protein translocase subunit SecA (7.9%) SecA DEAD-like, N-terminal (7.9%) Helicase superfamily 1/2, ATP-binding domain (7.9%)" AIEEAGIPTIIIAALPPVVR Bacillota Bacteria Bacillati Bacillota 1.21.4.1 (100%) D-proline reductase (100%) GO:0050002 (100%) D-proline reductase activity (100%) "IPR010187 (50%) IPR022787 (50%)" "Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase (50%) D-proline reductase (dithiol), PrdB protein (50%)" IDGNYGIILEVNCQTDFVAK root GO:0006414 (0.4%) "GO:0005737 (47%) GO:0005739 (0.4%) GO:0005829 (0.4%)" "GO:0003746 (50.4%) GO:0005085 (0.4%) GO:0008270 (0.4%)" translational elongation (0.4%) "cytoplasm (47%) mitochondrion (0.4%) cytosol (0.4%)" "translation elongation factor activity (50.4%) guanyl-nucleotide exchange factor activity (0.4%) zinc ion binding (0.4%)" "IPR001816 (20.1%) IPR018101 (20.1%) IPR036402 (20.1%)" "Translation elongation factor EFTs/EF1B (20.1%) Translation elongation factor Ts, conserved site (20.1%) Elongation factor Ts, dimerisation domain superfamily (20.1%)" WCPGCGDHAVLNCLHK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.2.7.3 (60%) 1.2.7.11 (40%)" "2-oxoglutarate synthase (60%) 2-oxoacid oxidoreductase (ferredoxin) (40%)" GO:0044281 (32.4%) "GO:0030976 (33.8%) GO:0016625 (32.4%) GO:0047553 (1.5%)" small molecule metabolic process (32.4%) "thiamine pyrophosphate binding (33.8%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor (32.4%) 2-oxoglutarate synthase activity (1.5%)" "IPR011766 (33.3%) IPR029061 (33.3%) IPR051457 (33.3%)" "Thiamine pyrophosphate enzyme, TPP-binding (33.3%) Thiamin diphosphate-binding fold (33.3%) 2-oxoacid:ferredoxin oxidoreductase (33.3%)" HLAKAPAKESAPAAAAPAAQPALAAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.3.1.61 (98.1%) 2.3.1.- (1.9%)" "dihydrolipoyllysine-residue succinyltransferase (98.1%) Transferring groups other than amino-acyl groups (1.9%)" "GO:0006099 (19.3%) GO:0033512 (18.5%) GO:0006554 (0.4%)" "GO:0005829 (19.3%) GO:0045252 (18.9%) GO:0005737 (1.2%)" "GO:0004149 (20.1%) GO:0031405 (1.2%) GO:0016407 (0.8%)" "tricarboxylic acid cycle (19.3%) L-lysine catabolic process to acetyl-CoA via saccharopine (18.5%) lysine catabolic process (0.4%)" "cytosol (19.3%) oxoglutarate dehydrogenase complex (18.9%) cytoplasm (1.2%)" "dihydrolipoyllysine-residue succinyltransferase activity (20.1%) lipoic acid binding (1.2%) acetyltransferase activity (0.8%)" "IPR004167 (11.4%) IPR036625 (11.4%) IPR000089 (11.2%)" "Peripheral subunit-binding domain (11.4%) E3-binding domain superfamily (11.4%) Biotin/lipoyl attachment (11.2%)" MKFFIDTANLDQIR root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (17%) GO:0006098 (16.4%) GO:0042182 (16.2%)" GO:0005737 (17%) "GO:0016832 (17%) GO:0004801 (16.4%)" "carbohydrate metabolic process (17%) pentose-phosphate shunt (16.4%) ketone catabolic process (16.2%)" cytoplasm (17%) "aldehyde-lyase activity (17%) transaldolase activity (16.4%)" "IPR001585 (16.8%) IPR013785 (16.8%) IPR018225 (16.8%)" "Transaldolase/Fructose-6-phosphate aldolase (16.8%) Aldolase-type TIM barrel (16.8%) Transaldolase, active site (16.8%)" DALAPHISAETIEYHYGK root 1.15.1.1 (100%) superoxide dismutase (100%) "GO:0000303 (0.1%) GO:0006801 (0.1%) GO:0019430 (0.1%)" "GO:0005737 (31.8%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0004784 (33.7%) GO:0046914 (31.5%) GO:0046872 (2.1%)" "response to superoxide (0.1%) superoxide metabolic process (0.1%) removal of superoxide radicals (0.1%)" "cytoplasm (31.8%) cytosol (0.1%) membrane (0.1%)" "superoxide dismutase activity (33.7%) transition metal ion binding (31.5%) metal ion binding (2.1%)" "IPR001189 (16.9%) IPR019831 (16.9%) IPR036324 (16.9%)" "Manganese/iron superoxide dismutase (16.9%) Manganese/iron superoxide dismutase, N-terminal (16.9%) Manganese/iron superoxide dismutase, N-terminal domain superfamily (16.9%)" SVDPSVAEEANKLIGTYAAHTPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" KTELDEIVSETKQEEEKLR GLKLEQATIEMLGTADK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.1%) GO:0009408 (0.2%) GO:0051085 (0.2%)" "GO:0005737 (15.4%) GO:1990220 (0.2%)" "GO:0005524 (17.1%) GO:0140662 (17.1%) GO:0016853 (17%)" "protein refolding (17.1%) response to heat (0.2%) obsolete chaperone cofactor-dependent protein refolding (0.2%)" "cytoplasm (15.4%) GroEL-GroES complex (0.2%)" "ATP binding (17.1%) ATP-dependent protein folding chaperone (17.1%) isomerase activity (17%)" "IPR001844 (16.8%) IPR002423 (16.8%) IPR027409 (16.8%)" "Chaperonin Cpn60/GroEL (16.8%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like apical domain superfamily (16.8%)" NKGDYFQVQVIDELKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 4.1.1.70 (100%) Transferred entry: 7.2.4.5 (100%) GO:0016829 (100%) lyase activity (100%) "IPR000089 (29.6%) IPR011053 (29.6%) IPR050709 (29.6%)" "Biotin/lipoyl attachment (29.6%) Single hybrid motif (29.6%) Biotin Carboxyl Carrier/Decarboxylase Components (29.6%)" GQIPVREEPTEEQR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11%) GO:0017038 (11%) GO:0043952 (11%)" "GO:0005829 (11%) GO:0005886 (11%) GO:0031522 (11%)" "GO:0005524 (11%) GO:0046872 (11%) GO:0008564 (1.2%)" "protein targeting (11%) protein import (11%) protein transport by the Sec complex (11%)" "cytosol (11%) plasma membrane (11%) cell envelope Sec protein transport complex (11%)" "ATP binding (11%) metal ion binding (11%) protein-exporting ATPase activity (1.2%)" "IPR000185 (7.7%) IPR001650 (7.7%) IPR004027 (7.7%)" "Protein translocase subunit SecA (7.7%) Helicase, C-terminal domain-like (7.7%) SEC-C motif (7.7%)" MQAASGQLQQSHLLK Bacteria Bacteria "GO:0006412 (32.9%) GO:0000027 (0.1%) GO:0002181 (0.1%)" "GO:0022625 (32.7%) GO:0005840 (1%) GO:1990904 (0.1%)" "GO:0003735 (32.9%) GO:0019843 (0.1%)" "translation (32.9%) ribosomal large subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic large ribosomal subunit (32.7%) ribosome (1%) ribonucleoprotein complex (0.1%)" "structural constituent of ribosome (32.9%) rRNA binding (0.1%)" "IPR001854 (25%) IPR018254 (25%) IPR036049 (25%)" "Large ribosomal subunit protein uL29 (25%) Large ribosomal subunit protein uL29, conserved site (25%) Large ribosomal subunit protein uL29 superfamily (25%)" TQTPGGSVCNTMR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.7.1.- (100%) Phosphotransferases with an alcohol group as acceptor (100%) GO:0016301 (100%) kinase activity (100%) "IPR002173 (25%) IPR011611 (25%) IPR029056 (25%)" "Carbohydrate/purine kinase, PfkB, conserved site (25%) Carbohydrate kinase PfkB (25%) Ribokinase-like (25%)" KPGMTREELIGVNAGIVK Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25.5%) GO:0006099 (23.3%) GO:0019752 (0.1%)" GO:0005737 (0.1%) "GO:0004459 (25.5%) GO:0030060 (25.3%) GO:0016491 (0.1%)" "lactate metabolic process (25.5%) tricarboxylic acid cycle (23.3%) carboxylic acid metabolic process (0.1%)" cytoplasm (0.1%) "L-lactate dehydrogenase (NAD+) activity (25.5%) L-malate dehydrogenase (NAD+) activity (25.3%) oxidoreductase activity (0.1%)" "IPR001236 (16.7%) IPR011275 (16.7%) IPR022383 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) Malate dehydrogenase, type 3 (16.7%) Lactate/malate dehydrogenase, C-terminal (16.7%)" MENLKNVAPVEDFNWDAYENGETFGGASHEELEK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (25%) GO:0022627 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic small ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR003029 (25%) IPR012340 (25%) IPR035104 (25%)" "S1 domain (25%) Nucleic acid-binding, OB-fold (25%) Ribosomal protein S1-like (25%)" VCSMLDKLAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20%) "GO:0005829 (18.6%) GO:0015935 (18.6%) GO:0005840 (1.4%)" "GO:0003735 (20%) GO:0070181 (18.6%) GO:0019843 (1.4%)" translation (20%) "cytosol (18.6%) small ribosomal subunit (18.6%) ribosome (1.4%)" "structural constituent of ribosome (20%) small ribosomal subunit rRNA binding (18.6%) rRNA binding (1.4%)" "IPR002583 (50%) IPR036510 (50%)" "Small ribosomal subunit protein bS20 (50%) Small ribosomal subunit protein bS20 superfamily (50%)" IIITEYGVADLR Bacteria Bacteria 2.8.3.- (100%) CoA-transferases (100%) "GO:0006083 (26.6%) GO:0006084 (22.9%)" "GO:0008775 (26.6%) GO:0003986 (22.9%) GO:0016787 (0.9%)" "acetate metabolic process (26.6%) acetyl-CoA metabolic process (22.9%)" "acetate CoA-transferase activity (26.6%) acetyl-CoA hydrolase activity (22.9%) hydrolase activity (0.9%)" "IPR026888 (17.4%) IPR037171 (17.4%) IPR038460 (17.4%)" "Acetyl-CoA hydrolase/transferase, C-terminal domain (17.4%) NagB/RpiA transferase-like (17.4%) Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily (17.4%)" SVTQEEVTMENLGGSEVHSTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0015977 (24%) GO:0009317 (24%) "GO:0003989 (24%) GO:0004658 (24%) GO:0016740 (4%)" carbon fixation (24%) acetyl-CoA carboxylase complex (24%) "acetyl-CoA carboxylase activity (24%) propionyl-CoA carboxylase activity (24%) transferase activity (4%)" "IPR011762 (20%) IPR011763 (20%) IPR029045 (20%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20%) Acetyl-coenzyme A carboxyltransferase, C-terminal (20%) ClpP/crotonase-like domain superfamily (20%)" GGHHLNINVFNR Bacillati Bacteria Bacillati 2.3.1.54 (100%) formate C-acetyltransferase (100%) GO:0006006 (29.1%) GO:0005829 (34.4%) "GO:0008861 (34.4%) GO:0016829 (2%)" glucose metabolic process (29.1%) cytosol (34.4%) "formate C-acetyltransferase activity (34.4%) lyase activity (2%)" "IPR001150 (21.2%) IPR019777 (21.2%) IPR050244 (21.2%)" "Glycine radical domain (21.2%) Formate C-acetyltransferase glycine radical, conserved site (21.2%) Autonomous Glycyl Radical Cofactor (21.2%)" EVVIQQIDKFEK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae IMDDIIDLESEKIEMILAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.17.4.1 (100%) ribonucleoside-diphosphate reductase (100%) "GO:0009263 (20%) GO:0071897 (20%)" "GO:0004748 (20%) GO:0005524 (20%) GO:0031419 (20%)" "deoxyribonucleotide biosynthetic process (20%) DNA biosynthetic process (20%)" "ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (20%) ATP binding (20%) cobalamin binding (20%)" "IPR000788 (25%) IPR013344 (25%) IPR013509 (25%)" "Ribonucleotide reductase large subunit, C-terminal (25%) Ribonucleotide reductase, adenosylcobalamin-dependent (25%) Ribonucleotide reductase large subunit, N-terminal (25%)" VVILSAGTGNPFFTTDSAACLR root 2.7.4.22 (100%) UMP kinase (100%) "GO:0006225 (20%) GO:0044210 (19.6%) GO:0006221 (0%)" GO:0005829 (20%) "GO:0005524 (20%) GO:0033862 (20%) GO:0016301 (0.3%)" "UDP biosynthetic process (20%) 'de novo' CTP biosynthetic process (19.6%) pyrimidine nucleotide biosynthetic process (0%)" cytosol (20%) "ATP binding (20%) UMP kinase activity (20%) kinase activity (0.3%)" "IPR036393 (25.3%) IPR001048 (25.3%) IPR015963 (24.9%)" "Acetylglutamate kinase-like superfamily (25.3%) Aspartate/glutamate/uridylate kinase (25.3%) Uridylate kinase, bacteria (24.9%)" ADDTYRPER Pseudomonadati Bacteria Pseudomonadati "3.5.99.6 (99.5%) 3.1.1.31 (0.5%)" "glucosamine-6-phosphate deaminase (99.5%) 6-phosphogluconolactonase (0.5%)" "GO:0005975 (32.3%) GO:0006044 (24.8%) GO:0006046 (7.6%)" "GO:0004342 (32.9%) GO:0016853 (1.6%) GO:0016787 (0.2%)" "carbohydrate metabolic process (32.3%) N-acetylglucosamine metabolic process (24.8%) N-acetylglucosamine catabolic process (7.6%)" "glucosamine-6-phosphate deaminase activity (32.9%) isomerase activity (1.6%) hydrolase activity (0.2%)" "IPR052960 (15.9%) IPR003737 (15.9%) IPR024078 (15.7%)" "Glucosamine-6-phosphate deaminase-like (15.9%) N-acetylglucosaminyl phosphatidylinositol deacetylase-related (15.9%) Putative deacetylase LmbE-like domain superfamily (15.7%)" GNPTVEVDVVLESGIMGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.3%)" "GO:0000287 (16.7%) GO:0004634 (16.7%) GO:0016829 (0.3%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.3%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%) lyase activity (0.3%)" "IPR000941 (16.7%) IPR020810 (16.7%) IPR020811 (16.7%)" "Enolase (16.7%) Enolase, C-terminal TIM barrel domain (16.7%) Enolase, N-terminal (16.7%)" ILAEINYLETVKRPEISAQIAEAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0006354 (20%) GO:0032784 (20%)" "GO:0003677 (20%) GO:0003746 (20%) GO:0070063 (20%)" "DNA-templated transcription elongation (20%) regulation of DNA-templated transcription elongation (20%)" "DNA binding (20%) translation elongation factor activity (20%) RNA polymerase binding (20%)" "IPR001437 (12.5%) IPR006359 (12.5%) IPR018151 (12.5%)" "Transcription elongation factor, GreA/GreB, C-terminal (12.5%) Transcription elongation factor GreA (12.5%) Transcription elongation factor, GreA/GreB, conserved site (12.5%)" HENLSIAENFLHMLK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "2.3.3.1 (50%) 2.3.3.16 (50%)" "citrate (Si)-synthase (50%) citrate synthase (unknown stereospecificity) (50%)" "GO:0005975 (25%) GO:0006099 (25%)" GO:0005829 (25%) "GO:0036440 (17.7%) GO:0046912 (7.3%)" "carbohydrate metabolic process (25%) tricarboxylic acid cycle (25%)" cytosol (25%) "citrate synthase activity (17.7%) acyltransferase activity, acyl groups converted into alkyl on transfer (7.3%)" "IPR002020 (20.2%) IPR016142 (20.2%) IPR016143 (20.2%)" "Citrate synthase (20.2%) Citrate synthase-like, large alpha subdomain (20.2%) Citrate synthase-like, small alpha subdomain (20.2%)" TYMVDKTVER Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.3%) GO:0006164 (1%)" GO:0005737 (20.2%) "GO:0004642 (20.2%) GO:0005524 (19.4%) GO:0046872 (19.4%)" "'de novo' IMP biosynthetic process (19.3%) purine nucleotide biosynthetic process (1%)" cytoplasm (20.2%) "phosphoribosylformylglycinamidine synthase activity (20.2%) ATP binding (19.4%) metal ion binding (19.4%)" "IPR010918 (11.3%) IPR036676 (11.3%) IPR036921 (11.3%)" "PurM-like, C-terminal domain (11.3%) PurM-like, C-terminal domain superfamily (11.3%) PurM-like, N-terminal domain superfamily (11.3%)" SYMAEWNTIGFVPFKEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR007139 (100%) Protein of unknown function DUF349 (100%) AYEAIVKGDPMPQPGIPESLNVLLHELR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (17.9%) GO:0006508 (5.3%)" GO:0000428 (17.9%) "GO:0003677 (17.9%) GO:0003899 (17.9%) GO:0032549 (17.9%)" "DNA-templated transcription (17.9%) proteolysis (5.3%)" DNA-directed RNA polymerase complex (17.9%) "DNA binding (17.9%) DNA-directed RNA polymerase activity (17.9%) ribonucleoside binding (17.9%)" "IPR007120 (7.7%) IPR007641 (7.7%) IPR015712 (7.7%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.7%) RNA polymerase Rpb2, domain 7 (7.7%) DNA-directed RNA polymerase, subunit 2 (7.7%)" NQLRDEVDR root 2.7.13.3 (100%) histidine kinase (100%) "GO:0010468 (32.8%) GO:0006355 (0.1%) GO:0006302 (0%)" "GO:0005737 (33.1%) GO:0016020 (0.1%) GO:0005829 (0%)" "GO:0008270 (33.1%) GO:0003677 (0.6%) GO:0000155 (0%)" "regulation of gene expression (32.8%) regulation of DNA-templated transcription (0.1%) double-strand break repair (0%)" "cytoplasm (33.1%) membrane (0.1%) cytosol (0%)" "zinc ion binding (33.1%) DNA binding (0.6%) phosphorelay sensor kinase activity (0%)" "IPR037187 (17.2%) IPR048489 (17.2%) IPR012784 (16.9%)" "DksA, N-terminal domain superfamily (17.2%) DnaK suppressor protein DksA, N-terminal domain (17.2%) RNA polymerase-binding transcription factor DksA (16.9%)" ILTGDKVTVELTPYDLSK root "GO:0005829 (24.9%) GO:0005737 (0%)" "GO:0003743 (25.2%) GO:0043022 (24.9%) GO:0019843 (24.8%)" "cytosol (24.9%) cytoplasm (0%)" "translation initiation factor activity (25.2%) ribosome binding (24.9%) rRNA binding (24.8%)" "IPR004368 (25%) IPR006196 (25%) IPR012340 (25%)" "Translation initiation factor IF-1 (25%) RNA-binding domain, S1, IF1 type (25%) Nucleic acid-binding, OB-fold (25%)" EGGEQRPYTPRPR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (32.6%) "GO:0003723 (32.6%) GO:0120159 (32.6%) GO:0016829 (2.1%)" enzyme-directed rRNA pseudouridine synthesis (32.6%) "RNA binding (32.6%) rRNA pseudouridine synthase activity (32.6%) lyase activity (2.1%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" IKELGVTHVWYTGVIEHATK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.2.1.135 (100%) neopullulanase (100%) GO:0009313 (47.1%) "GO:0004556 (47.1%) GO:0031216 (5.9%)" oligosaccharide catabolic process (47.1%) "alpha-amylase activity (47.1%) neopullulanase activity (5.9%)" "IPR006047 (33.3%) IPR013780 (33.3%) IPR017853 (33.3%)" "Glycosyl hydrolase family 13, catalytic domain (33.3%) Glycosyl hydrolase, all-beta (33.3%) Glycoside hydrolase superfamily (33.3%)" TLNDMRQEYEQLIAK Simiiformes Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Euarchontoglires Primates Haplorrhini Simiiformes "GO:0045109 (15.8%) GO:0030855 (15.2%) GO:0043588 (11.4%)" "GO:0005882 (14.6%) GO:0005829 (9.5%) GO:0005856 (2.5%)" "GO:0005198 (14.6%) GO:0030280 (1.9%) GO:0005200 (0.6%)" "intermediate filament organization (15.8%) epithelial cell differentiation (15.2%) skin development (11.4%)" "intermediate filament (14.6%) cytosol (9.5%) cytoskeleton (2.5%)" "structural molecule activity (14.6%) structural constituent of skin epidermis (1.9%) structural constituent of cytoskeleton (0.6%)" "IPR002957 (34.2%) IPR039008 (34.2%) IPR018039 (31.6%)" "Keratin, type I (34.2%) Intermediate filament, rod domain (34.2%) Intermediate filament protein, conserved site (31.6%)" HNIPTAGYK root 6.3.4.13 (100%) phosphoribosylamine--glycine ligase (100%) "GO:0006189 (19.5%) GO:0009113 (18.6%) GO:0046084 (1%)" GO:0005829 (1%) "GO:0004637 (19.5%) GO:0005524 (19.5%) GO:0046872 (19.5%)" "'de novo' IMP biosynthetic process (19.5%) purine nucleobase biosynthetic process (18.6%) adenine biosynthetic process (1%)" cytosol (1%) "phosphoribosylamine-glycine ligase activity (19.5%) ATP binding (19.5%) metal ion binding (19.5%)" "IPR000115 (10.3%) IPR011054 (10.3%) IPR011761 (10.3%)" "Phosphoribosylglycinamide synthetase (10.3%) Rudiment single hybrid motif (10.3%) ATP-grasp fold (10.3%)" YYGGCEVVDQSEQIAIDR Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.1.2.1 (100%) glycine hydroxymethyltransferase (100%) "GO:0019264 (15%) GO:0035999 (14.8%) GO:0032259 (12.4%)" "GO:0005829 (15%) GO:0005737 (0.1%)" "GO:0004372 (15%) GO:0030170 (15%) GO:0008168 (12.4%)" "glycine biosynthetic process from serine (15%) tetrahydrofolate interconversion (14.8%) methylation (12.4%)" "cytosol (15%) cytoplasm (0.1%)" "glycine hydroxymethyltransferase activity (15%) pyridoxal phosphate binding (15%) methyltransferase activity (12.4%)" "IPR015421 (14.4%) IPR015424 (14.4%) IPR039429 (14.4%)" "Pyridoxal phosphate-dependent transferase, major domain (14.4%) Pyridoxal phosphate-dependent transferase (14.4%) Serine hydroxymethyltransferase-like domain (14.4%)" IVLAYEPVWAIGTGK root "5.3.1.1 (99.6%) 2.7.2.3 (0.2%) 2.7.7.9 (0.1%)" "triose-phosphate isomerase (99.6%) phosphoglycerate kinase (0.2%) UTP--glucose-1-phosphate uridylyltransferase (0.1%)" "GO:0006096 (16.4%) GO:0006094 (16.3%) GO:0019563 (16.1%)" "GO:0005829 (16.1%) GO:0020015 (0.3%) GO:0016020 (0.2%)" "GO:0004807 (16.7%) GO:0003755 (0.2%) GO:0005524 (0.1%)" "glycolytic process (16.4%) gluconeogenesis (16.3%) glycerol catabolic process (16.1%)" "cytosol (16.1%) glycosome (0.3%) membrane (0.2%)" "triose-phosphate isomerase activity (16.7%) peptidyl-prolyl cis-trans isomerase activity (0.2%) ATP binding (0.1%)" "IPR000652 (20%) IPR020861 (20%) IPR013785 (20%)" "Triosephosphate isomerase (20%) Triosephosphate isomerase, active site (20%) Aldolase-type TIM barrel (20%)" GMHTTTFSEMISLPGGGYLIDTPGIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.6.1.- (100%) In phosphorus-containing anhydrides (100%) GO:0042274 (16.7%) GO:0005737 (16.7%) "GO:0003924 (16.7%) GO:0005525 (16.7%) GO:0019843 (16.7%)" ribosomal small subunit biogenesis (16.7%) cytoplasm (16.7%) "GTPase activity (16.7%) GTP binding (16.7%) rRNA binding (16.7%)" "IPR004881 (16.7%) IPR010914 (16.7%) IPR012340 (16.7%)" "Ribosome biogenesis GTPase RsgA (16.7%) RsgA GTPase domain (16.7%) Nucleic acid-binding, OB-fold (16.7%)" QDGPTALILSR Bacteria Bacteria 2.2.1.1 (100%) transketolase (100%) "GO:0009052 (23.3%) GO:0006098 (1.7%) GO:0006310 (0%)" "GO:0005829 (25%) GO:0016020 (0%)" "GO:0004802 (25%) GO:0046872 (24.7%) GO:0016740 (0.2%)" "pentose-phosphate shunt, non-oxidative branch (23.3%) pentose-phosphate shunt (1.7%) DNA recombination (0%)" "cytosol (25%) membrane (0%)" "transketolase activity (25%) metal ion binding (24.7%) transferase activity (0.2%)" "IPR033247 (11.6%) IPR029061 (11.5%) IPR055152 (11.5%)" "Transketolase family (11.6%) Thiamin diphosphate-binding fold (11.5%) Transketolase-like, C-terminal domain (11.5%)" IGHTVEREDTPAIR Pseudomonadati Bacteria Pseudomonadati "GO:0006412 (32%) GO:0000027 (0.2%) GO:0002181 (0.2%)" "GO:0022625 (31.6%) GO:0005840 (2.8%) GO:0015934 (0.7%)" GO:0003735 (32.3%) "translation (32%) ribosomal large subunit assembly (0.2%) cytoplasmic translation (0.2%)" "cytosolic large ribosomal subunit (31.6%) ribosome (2.8%) large ribosomal subunit (0.7%)" structural constituent of ribosome (32.3%) "IPR005996 (25%) IPR016082 (25%) IPR036919 (25%)" "Large ribosomal subunit protein uL30, bacteria (25%) Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain (25%) Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily (25%)" VMGFIGGTSDRPAPISDKEVDAIMNR root "GO:0031564 (20%) GO:0006353 (19.9%) GO:0032784 (19.9%)" "GO:0005829 (20%) GO:0005840 (0%) GO:0005886 (0%)" "GO:0003735 (0%) GO:0008320 (0%) GO:0016491 (0%)" "transcription antitermination (20%) DNA-templated transcription termination (19.9%) regulation of DNA-templated transcription elongation (19.9%)" "cytosol (20%) ribosome (0%) plasma membrane (0%)" "structural constituent of ribosome (0%) protein transmembrane transporter activity (0%) oxidoreductase activity (0%)" "IPR006645 (11.2%) IPR036735 (11.2%) IPR043425 (11.2%)" "NusG-like, N-terminal (11.2%) NusG, N-terminal domain superfamily (11.2%) NusG-like (11.2%)" ESWQDKVEVLSAGADDYVTKPFHIEEVMAR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.7.13.3 (100%) histidine kinase (100%) "GO:0006355 (2.5%) GO:0045893 (0.2%)" "GO:0005829 (19.2%) GO:0032993 (19.2%) GO:0005737 (0.4%)" "GO:0000156 (19.2%) GO:0000976 (19.2%) GO:0001216 (17.3%)" "regulation of DNA-templated transcription (2.5%) positive regulation of DNA-templated transcription (0.2%)" "cytosol (19.2%) protein-DNA complex (19.2%) cytoplasm (0.4%)" "phosphorelay response regulator activity (19.2%) transcription cis-regulatory region binding (19.2%) DNA-binding transcription activator activity (17.3%)" "IPR001789 (19.6%) IPR011006 (19.6%) IPR039420 (19.3%)" "Signal transduction response regulator, receiver domain (19.6%) CheY-like superfamily (19.6%) Transcriptional regulatory protein WalR-like (19.3%)" MQSGSASLPEEYMTQIR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0005886 (50%) GO:0003755 (50%) plasma membrane (50%) peptidyl-prolyl cis-trans isomerase activity (50%) "IPR000297 (25%) IPR027304 (25%) IPR046357 (25%)" "Peptidyl-prolyl cis-trans isomerase, PpiC-type (25%) Trigger factor/SurA domain superfamily (25%) Peptidyl-prolyl cis-trans isomerase domain superfamily (25%)" KGGVIVYPTDSGYALGCK root "2.7.7.87 (96.4%) 3.1.3.97 (3.6%)" "L-threonylcarbamoyladenylate synthase (96.4%) 3',5'-nucleoside bisphosphate phosphatase (3.6%)" "GO:0006364 (0.3%) GO:0001522 (0.1%)" GO:0005829 (0.4%) "GO:0003725 (90.5%) GO:0016779 (6.3%) GO:0061710 (1.2%)" "rRNA processing (0.3%) pseudouridine synthesis (0.1%)" cytosol (0.4%) "double-stranded RNA binding (90.5%) nucleotidyltransferase activity (6.3%) L-threonylcarbamoyladenylate synthase (1.2%)" "IPR017945 (33.2%) IPR006070 (33.1%) IPR052532 (33%)" "DHBP synthase RibB-like alpha/beta domain superfamily (33.2%) Threonylcarbamoyl-AMP synthase-like domain (33.1%) SUA5 domain-containing protein (33%)" EGGIVVEDAVLMPMYIKDEEEKAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (16.7%) GO:0043335 (16.7%) GO:0051083 (16.7%)" "GO:0003755 (16.7%) GO:0043022 (16.7%) GO:0044183 (16.7%)" "protein transport (16.7%) protein unfolding (16.7%) 'de novo' cotranslational protein folding (16.7%)" "peptidyl-prolyl cis-trans isomerase activity (16.7%) ribosome binding (16.7%) protein folding chaperone (16.7%)" "IPR005215 (20%) IPR008881 (20%) IPR027304 (20%)" "Trigger factor (20%) Trigger factor, ribosome-binding, bacterial (20%) Trigger factor/SurA domain superfamily (20%)" FAPFVDFPIVFASALTK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.6.5.- (100%) Acting on GTP; involved in cellular and subcellular movement (100%) GO:0042254 (31.7%) "GO:0005525 (31.7%) GO:0043022 (31.7%) GO:0016787 (4.8%)" ribosome biogenesis (31.7%) "GTP binding (31.7%) ribosome binding (31.7%) hydrolase activity (4.8%)" "IPR005225 (14.3%) IPR006073 (14.3%) IPR015946 (14.3%)" "Small GTP-binding domain (14.3%) GTP binding domain (14.3%) K homology domain-like, alpha/beta (14.3%)" GYAFYQIVIADSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" ILADGGSIIIGSHLGRPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" LLQEEEEGLPLVGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 3.4.21.88 (100%) repressor LexA (100%) "GO:0006508 (14.2%) GO:0006260 (14%) GO:0006281 (14%)" "GO:0005829 (0.1%) GO:0032993 (0.1%)" "GO:0003677 (14%) GO:0004252 (14%) GO:0016787 (0.4%)" "proteolysis (14.2%) DNA replication (14%) DNA repair (14%)" "cytosol (0.1%) protein-DNA complex (0.1%)" "DNA binding (14%) serine-type endopeptidase activity (14%) hydrolase activity (0.4%)" "IPR006197 (11.1%) IPR006199 (11.1%) IPR006200 (11.1%)" "Peptidase S24, LexA-like (11.1%) LexA repressor, DNA-binding domain (11.1%) Transcription regulator LexA (11.1%)" LGIVMDPIANINIKK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 6.3.2.3 (100%) glutathione synthase (100%) "GO:0006750 (0.1%) GO:0051289 (0.1%)" "GO:0005737 (24.6%) GO:0005829 (0.1%)" "GO:0004363 (25.3%) GO:0005524 (24.7%) GO:0046872 (24.6%)" "glutathione biosynthetic process (0.1%) protein homotetramerization (0.1%)" "cytoplasm (24.6%) cytosol (0.1%)" "glutathione synthase activity (25.3%) ATP binding (24.7%) metal ion binding (24.6%)" "IPR004215 (17.1%) IPR016185 (17.1%) IPR006284 (16.7%)" "Prokaryotic glutathione synthetase, N-terminal (17.1%) Pre-ATP-grasp domain superfamily (17.1%) Glutathione synthetase, prokaryotic (16.7%)" FQQAGNIEKAEENYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" VDGIYTADPEKDPTATKFDDITYDEVLKR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.4.22 (100%) UMP kinase (100%) "GO:0006225 (20%) GO:0044210 (20%)" GO:0005737 (20%) "GO:0005524 (20%) GO:0033862 (20%)" "UDP biosynthetic process (20%) 'de novo' CTP biosynthetic process (20%)" cytoplasm (20%) "ATP binding (20%) UMP kinase activity (20%)" "IPR001048 (25%) IPR011817 (25%) IPR015963 (25%)" "Aspartate/glutamate/uridylate kinase (25%) Uridylate kinase (25%) Uridylate kinase, bacteria (25%)" ASADELHAYFAEVLPNYDRDR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "IPR041218 (25%) IPR049280 (25%) IPR049281 (25%)" "Domain of unknown function DUF5606 (25%) Domain of unknown function DUF6852 (25%) BVU_3817-like, C-terminal domain superfamily (25%)" AQLKAEGNYEALQALPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (20%) "GO:0005737 (20%) GO:0015935 (20%)" "GO:0003735 (20%) GO:0019843 (20%)" translation (20%) "cytoplasm (20%) small ribosomal subunit (20%)" "structural constituent of ribosome (20%) rRNA binding (20%)" "IPR001209 (25%) IPR018271 (25%) IPR023036 (25%)" "Small ribosomal subunit protein uS14 (25%) Small ribosomal subunit protein uS14, conserved site (25%) Small ribosomal subunit protein uS14, bacteria/plastid (25%)" GTVFTHNAHSNAAKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 4.1.1.15 (100%) glutamate decarboxylase (100%) GO:0006538 (25%) GO:0005829 (25%) "GO:0004351 (25%) GO:0030170 (25%)" L-glutamate catabolic process (25%) cytosol (25%) "glutamate decarboxylase activity (25%) pyridoxal phosphate binding (25%)" "IPR002129 (25%) IPR010107 (25%) IPR015421 (25%)" "Pyridoxal phosphate-dependent decarboxylase (25%) Glutamate decarboxylase (25%) Pyridoxal phosphate-dependent transferase, major domain (25%)" GQIEGAVSSSDASTEK root 5.3.1.6 (100%) ribose-5-phosphate isomerase (100%) "GO:0006014 (24.9%) GO:0009052 (24.9%)" GO:0005829 (24.9%) "GO:0004751 (25%) GO:0016853 (0.3%) GO:0042802 (0%)" "D-ribose metabolic process (24.9%) pentose-phosphate shunt, non-oxidative branch (24.9%)" cytosol (24.9%) "ribose-5-phosphate isomerase activity (25%) isomerase activity (0.3%) identical protein binding (0%)" "IPR037171 (33.7%) IPR004788 (33.5%) IPR020672 (32.5%)" "NagB/RpiA transferase-like (33.7%) Ribose 5-phosphate isomerase, type A (33.5%) Ribose-5-phosphate isomerase, type A, subgroup (32.5%)" AIHTLWNVLDELDQAWLPVEK Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "5.4.2.11 (99.7%) 5.4.2.- (0.3%)" "phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) (99.7%) Phosphotransferases (phosphomutases) (0.3%)" "GO:0006094 (33.1%) GO:0006096 (33.1%) GO:0061621 (0.1%)" "GO:0005737 (0.1%) GO:0005829 (0.1%)" "GO:0004619 (32.9%) GO:0016853 (0.4%) GO:0016868 (0.2%)" "gluconeogenesis (33.1%) glycolytic process (33.1%) canonical glycolysis (0.1%)" "cytoplasm (0.1%) cytosol (0.1%)" "phosphoglycerate mutase activity (32.9%) isomerase activity (0.4%) intramolecular phosphotransferase activity (0.2%)" "IPR005952 (25.1%) IPR013078 (25.1%) IPR029033 (25.1%)" "Phosphoglycerate mutase 1 (25.1%) Histidine phosphatase superfamily, clade-1 (25.1%) Histidine phosphatase superfamily (25.1%)" RVVFSNLQDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (33.3%) "GO:0022625 (33.3%) GO:0005840 (0.2%)" GO:0003735 (33.3%) translation (33.3%) "cytosolic large ribosomal subunit (33.3%) ribosome (0.2%)" structural constituent of ribosome (33.3%) "IPR000456 (33.4%) IPR036373 (33.4%) IPR047859 (33.2%)" "Large ribosomal subunit protein bL17 (33.4%) Large ribosomal subunit protein bL17 superfamily (33.4%) Large ribosomal subunit protein bL17, conserved site (33.2%)" VHFLDLPFYETGK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (32.9%) GO:0006044 (24.1%) GO:0006046 (8.9%)" "GO:0004342 (32.9%) GO:0016853 (0.6%)" "carbohydrate metabolic process (32.9%) N-acetylglucosamine metabolic process (24.1%) N-acetylglucosamine catabolic process (8.9%)" "glucosamine-6-phosphate deaminase activity (32.9%) isomerase activity (0.6%)" "IPR003737 (15.5%) IPR052960 (15.5%) IPR024078 (15.2%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (15.5%) Glucosamine-6-phosphate deaminase-like (15.5%) Putative deacetylase LmbE-like domain superfamily (15.2%)" VDKIDVVPTGWGTPLEVFEHVFEHER Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 1.16.3.2 (100%) bacterial non-heme ferritin (100%) "GO:0006826 (14.6%) GO:0006879 (14.6%)" GO:0005829 (14.6%) "GO:0004322 (14.6%) GO:0008198 (14.6%) GO:0008199 (14.6%)" "iron ion transport (14.6%) intracellular iron ion homeostasis (14.6%)" cytosol (14.6%) "ferroxidase activity (14.6%) ferrous iron binding (14.6%) ferric iron binding (14.6%)" "IPR001519 (16.7%) IPR008331 (16.7%) IPR009040 (16.7%)" "Ferritin (16.7%) Ferritin/DPS domain (16.7%) Ferritin-like diiron domain (16.7%)" GKPYSIVVVAEGIK Pseudomonadati Bacteria Pseudomonadati 2.7.1.11 (100%) 6-phosphofructokinase (100%) "GO:0006002 (8.4%) GO:0030388 (8.4%) GO:0061621 (8.4%)" "GO:0005945 (8.4%) GO:0016020 (0.7%)" "GO:0003872 (8.4%) GO:0005524 (8.4%) GO:0016208 (8.4%)" "fructose 6-phosphate metabolic process (8.4%) fructose 1,6-bisphosphate metabolic process (8.4%) canonical glycolysis (8.4%)" "6-phosphofructokinase complex (8.4%) membrane (0.7%)" "6-phosphofructokinase activity (8.4%) ATP binding (8.4%) AMP binding (8.4%)" "IPR000023 (20.7%) IPR012003 (20.7%) IPR022953 (20.7%)" "Phosphofructokinase domain (20.7%) ATP-dependent 6-phosphofructokinase, prokaryotic-type (20.7%) ATP-dependent 6-phosphofructokinase (20.7%)" ANDIDVPAALIDSEIDVLRR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 5.2.1.8 (100%) peptidylprolyl isomerase (100%) "GO:0015031 (12.6%) GO:0051301 (12.4%) GO:0043335 (12%)" "GO:0005737 (12.3%) GO:0005829 (0%) GO:0016020 (0%)" "GO:0003755 (12.6%) GO:0043022 (12%) GO:0044183 (12%)" "protein transport (12.6%) cell division (12.4%) protein unfolding (12%)" "cytoplasm (12.3%) cytosol (0%) membrane (0%)" "peptidyl-prolyl cis-trans isomerase activity (12.6%) ribosome binding (12%) protein folding chaperone (12%)" "IPR008880 (12.7%) IPR027304 (12.7%) IPR037041 (12.7%)" "Trigger factor, C-terminal (12.7%) Trigger factor/SurA domain superfamily (12.7%) Trigger factor, C-terminal domain superfamily (12.7%)" VLDTTSKWFGVTYAADR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0016740 (100%) transferase activity (100%) "IPR029044 (88.1%) IPR005835 (11.9%)" "Nucleotide-diphospho-sugar transferases (88.1%) Nucleotidyl transferase domain (11.9%)" TYDDLDYNMLNTTLDVSAVSFHK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) GO:0006633 (50%) GO:0004318 (50%) fatty acid biosynthetic process (50%) enoyl-[acyl-carrier-protein] reductase (NADH) activity (50%) "IPR002347 (33.3%) IPR014358 (33.3%) IPR036291 (33.3%)" "Short-chain dehydrogenase/reductase SDR (33.3%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.3%) NAD(P)-binding domain superfamily (33.3%)" YNIPVMGVTAVGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.3.1.245 (85.7%) 4.1.2.- (14.3%)" "3-hydroxy-5-phosphooxypentane-2,4-dione thiolase (85.7%) Aldehyde-lyases (14.3%)" "GO:0004332 (66.7%) GO:0016746 (33.3%)" "fructose-bisphosphate aldolase activity (66.7%) acyltransferase activity (33.3%)" "IPR002915 (25%) IPR013785 (25%) IPR041720 (25%)" "DeoC/FbaB/LacD aldolase (25%) Aldolase-type TIM barrel (25%) Aldolase FbaB-like, archaeal-type (25%)" KDENGSIIYEDDFFGK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.22 (100%) asparagine--tRNA ligase (100%) GO:0006421 (20%) GO:0005737 (20%) "GO:0003676 (20%) GO:0004816 (20%) GO:0005524 (20%)" asparaginyl-tRNA aminoacylation (20%) cytoplasm (20%) "nucleic acid binding (20%) asparagine-tRNA ligase activity (20%) ATP binding (20%)" "IPR002312 (14.3%) IPR004364 (14.3%) IPR004365 (14.3%)" "Aspartyl/Asparaginyl-tRNA synthetase, class IIb (14.3%) Aminoacyl-tRNA synthetase, class II (D/K/N) (14.3%) OB-fold nucleic acid binding domain, AA-tRNA synthetase-type (14.3%)" IAGAVSGGNDHISGR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0044718 (25%) GO:0009279 (25%) "GO:0015344 (25%) GO:0038023 (24.6%) GO:0047091 (0.4%)" siderophore transmembrane transport (25%) cell outer membrane (25%) "siderophore uptake transmembrane transporter activity (25%) signaling receptor activity (24.6%) L-lysine 6-monooxygenase (NADPH) activity (0.4%)" "IPR012910 (14.5%) IPR036942 (14.5%) IPR037066 (14.5%)" "TonB-dependent receptor, plug domain (14.5%) TonB-dependent receptor-like, beta-barrel domain superfamily (14.5%) TonB-dependent receptor, plug domain superfamily (14.5%)" IIPDQSLAFLQYR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.1.26.- (50%) 3.1.4.- (50%)" "Endoribonucleases producing 5'-phosphomonoesters (50%) Phosphoric diester hydrolases (50%)" GO:0006364 (16.7%) GO:0005737 (16.7%) "GO:0003723 (16.7%) GO:0004540 (16.7%) GO:0016787 (16.7%)" rRNA processing (16.7%) cytoplasm (16.7%) "RNA binding (16.7%) RNA nuclease activity (16.7%) hydrolase activity (16.7%)" "IPR003029 (25%) IPR004659 (25%) IPR012340 (25%)" "S1 domain (25%) Ribonuclease E/G (25%) Nucleic acid-binding, OB-fold (25%)" IIEVAINEITAITGQK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (17.3%) "GO:0005840 (17.3%) GO:1990904 (17.3%)" "GO:0003735 (17.3%) GO:0000049 (15.3%) GO:0019843 (15.3%)" translation (17.3%) "ribosome (17.3%) ribonucleoprotein complex (17.3%)" "structural constituent of ribosome (17.3%) tRNA binding (15.3%) rRNA binding (15.3%)" "IPR002132 (20%) IPR020930 (20%) IPR022803 (20%)" "Large ribosomal subunit protein uL5 (20%) Large ribosomal subunit protein uL5, bacteria (20%) Large ribosomal subunit protein uL5 domain superfamily (20%)" EACGLGLKEAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0022625 (25%) GO:0005840 (0.1%)" "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) "cytosolic large ribosomal subunit (25%) ribosome (0.1%)" "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR013823 (20%) IPR014719 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, C-terminal (20%) Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like (20%)" MITVNNLDVQFGKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "GO:0005524 (50%) GO:0016887 (50%)" "ATP binding (50%) ATP hydrolysis activity (50%)" "IPR003439 (20.3%) IPR027417 (20.3%) IPR051309 (20.3%)" "ABC transporter-like, ATP-binding domain (20.3%) P-loop containing nucleoside triphosphate hydrolase (20.3%) ABC transporter ABCF subfamily ATPase (20.3%)" VLSESDFQVNQLLDILR root "GO:0006974 (0.1%) GO:0042542 (0.1%)" GO:0005829 (49.7%) "GO:0000166 (49.7%) GO:0016853 (0.2%) GO:0000049 (0.1%)" "DNA damage response (0.1%) response to hydrogen peroxide (0.1%)" cytosol (49.7%) "nucleotide binding (49.7%) isomerase activity (0.2%) tRNA binding (0.1%)" "IPR007551 (25.1%) IPR035570 (25.1%) IPR036183 (25.1%)" "Nucleotide-binding protein YajQ/Smlt4090-like (25.1%) UPF0234, N-terminal (25.1%) YajQ-like superfamily (25.1%)" HFGIAMDNVENCR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.1.1.37 (100%) malate dehydrogenase (100%) GO:0006108 (34%) "GO:0016615 (32%) GO:0016616 (32%) GO:0030060 (2%)" malate metabolic process (34%) "malate dehydrogenase activity (32%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (32%) L-malate dehydrogenase (NAD+) activity (2%)" "IPR001236 (16.7%) IPR001557 (16.7%) IPR010945 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) L-lactate/malate dehydrogenase (16.7%) Malate dehydrogenase, type 2 (16.7%)" GGIVDDLLVYHYEPEK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (14.3%) GO:0032259 (12.2%) GO:0006546 (0.8%)" "GO:0005960 (15.1%) GO:0005829 (14.9%)" "GO:0004047 (15.1%) GO:0008483 (15.1%) GO:0008168 (12.2%)" "glycine decarboxylation via glycine cleavage system (14.3%) methylation (12.2%) glycine catabolic process (0.8%)" "glycine cleavage complex (15.1%) cytosol (14.9%)" "aminomethyltransferase activity (15.1%) transaminase activity (15.1%) methyltransferase activity (12.2%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" LTNSDITSFQPQYSPDGKEVAFLENR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.4.21.- (100%) Serine endopeptidases (100%) GO:0006508 (33.3%) GO:0005737 (33.3%) GO:0008236 (33.3%) proteolysis (33.3%) cytoplasm (33.3%) serine-type peptidase activity (33.3%) "IPR005151 (14.6%) IPR011659 (14.6%) IPR012393 (14.6%)" "Tail specific protease (14.6%) WD40-like beta-propeller (14.6%) Tricorn protease (14.6%)" VYAGSINAGSYVLNTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" GVCATNEEGYLTGVVER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) IPR029044 (100%) Nucleotide-diphospho-sugar transferases (100%) MDTNKFVNR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.4.2 (100%) glycine dehydrogenase (aminomethyl-transferring) (100%) GO:0019464 (16.7%) "GO:0005829 (16.7%) GO:0005960 (16.7%)" "GO:0004375 (16.7%) GO:0016594 (16.7%) GO:0030170 (16.7%)" glycine decarboxylation via glycine cleavage system (16.7%) "cytosol (16.7%) glycine cleavage complex (16.7%)" "glycine dehydrogenase (decarboxylating) activity (16.7%) glycine binding (16.7%) pyridoxal phosphate binding (16.7%)" "IPR003437 (14.3%) IPR015421 (14.3%) IPR015422 (14.3%)" "Glycine dehydrogenase (decarboxylating) (14.3%) Pyridoxal phosphate-dependent transferase, major domain (14.3%) Pyridoxal phosphate-dependent transferase, small domain (14.3%)" GKFFHTNWTGEGGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.44 (100%) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) (100%) "GO:0006098 (25%) GO:0019521 (25%)" "GO:0004616 (25%) GO:0050661 (25%)" "pentose-phosphate shunt (25%) D-gluconate metabolic process (25%)" "phosphogluconate dehydrogenase (decarboxylating) activity (25%) NADP binding (25%)" "IPR006113 (12.5%) IPR006114 (12.5%) IPR006115 (12.5%)" "6-phosphogluconate dehydrogenase, decarboxylating (12.5%) 6-phosphogluconate dehydrogenase, C-terminal (12.5%) 6-phosphogluconate dehydrogenase, NADP-binding (12.5%)" ALRPLPDKFHGLQDQEVR root 6.1.1.6 (100%) lysine--tRNA ligase (100%) "GO:0006430 (14.6%) GO:0006418 (0.1%) GO:0034605 (0.1%)" "GO:0005829 (14.6%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0000049 (14.6%) GO:0004824 (14.6%) GO:0005524 (14.6%)" "lysyl-tRNA aminoacylation (14.6%) tRNA aminoacylation for protein translation (0.1%) cellular response to heat (0.1%)" "cytosol (14.6%) cytoplasm (0.1%) membrane (0.1%)" "tRNA binding (14.6%) lysine-tRNA ligase activity (14.6%) ATP binding (14.6%)" "IPR045864 (11.6%) IPR012340 (11.5%) IPR044136 (11.5%)" "Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.6%) Nucleic acid-binding, OB-fold (11.5%) Lysine-tRNA ligase, class II, N-terminal (11.5%)" NGLNKDNIDWVIPHQANLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.180 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase III (100%) "GO:0006633 (20%) GO:0044550 (20%)" GO:0005737 (20%) "GO:0004315 (20%) GO:0033818 (20%)" "fatty acid biosynthetic process (20%) secondary metabolite biosynthetic process (20%)" cytoplasm (20%) "3-oxoacyl-[acyl-carrier-protein] synthase activity (20%) beta-ketoacyl-acyl-carrier-protein synthase III activity (20%)" "IPR004655 (25%) IPR013747 (25%) IPR013751 (25%)" "Beta-ketoacyl-[acyl-carrier-protein] synthase III (25%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal (25%) Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal (25%)" SQGYDTPLVADVHFNPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 1.17.7.3 (100%) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (100%) "GO:0016114 (16.8%) GO:0019288 (16.8%)" "GO:0005506 (16.8%) GO:0046429 (16.8%) GO:0051539 (16.8%)" "terpenoid biosynthetic process (16.8%) isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (16.8%)" "iron ion binding (16.8%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin) (16.8%) 4 iron, 4 sulfur cluster binding (16.8%)" "IPR004588 (25%) IPR011005 (25%) IPR017178 (25%)" "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (25%) Dihydropteroate synthase-like superfamily (25%) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (25%)" AYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETR root "1.3.5.1 (98.1%) 1.3.5.4 (1.9%)" "succinate dehydrogenase (98.1%) Transferred entry: 1.3.5.1 (1.9%)" "GO:0006113 (14.3%) GO:0009061 (14.3%) GO:0022900 (13.1%)" "GO:0005886 (14.3%) GO:0005829 (0.1%) GO:0016020 (0.1%)" "GO:0009055 (14.3%) GO:0050660 (14.3%) GO:0000104 (8.8%)" "fermentation (14.3%) anaerobic respiration (14.3%) electron transport chain (13.1%)" "plasma membrane (14.3%) cytosol (0.1%) membrane (0.1%)" "electron transfer activity (14.3%) flavin adenine dinucleotide binding (14.3%) succinate dehydrogenase activity (8.8%)" "IPR003953 (11.5%) IPR027477 (11.5%) IPR030664 (11.5%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (11.5%) Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily (11.5%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (11.5%)" TPPEERDQAAIDASCKECDALFALLDAELAK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.5.1.18 (100%) glutathione transferase (100%) "GO:0005737 (1%) GO:0005829 (1%)" "GO:0016740 (71.2%) GO:0004364 (23.1%) GO:0016853 (1%)" "cytoplasm (1%) cytosol (1%)" "transferase activity (71.2%) glutathione transferase activity (23.1%) isomerase activity (1%)" "IPR036282 (19.4%) IPR010987 (19.3%) IPR004045 (18.7%)" "Glutathione S-transferase, C-terminal domain superfamily (19.4%) Glutathione S-transferase, C-terminal-like (19.3%) Glutathione S-transferase, N-terminal (18.7%)" YMDTPQTNPEGYK Bacteroidota Bacteria Pseudomonadati Bacteroidota "3.4.14.12 (71.4%) 3.4.-.- (14.3%) 3.4.14.5 (14.3%)" "Xaa-Xaa-Pro tripeptidyl-peptidase (71.4%) Acting on peptide bonds (peptidases) (14.3%) dipeptidyl-peptidase IV (14.3%)" GO:0006508 (33.3%) "GO:0008236 (33.3%) GO:0008239 (33.3%)" proteolysis (33.3%) "serine-type peptidase activity (33.3%) dipeptidyl-peptidase activity (33.3%)" "IPR001375 (25.2%) IPR050278 (25.2%) IPR029058 (24.9%)" "Peptidase S9, prolyl oligopeptidase, catalytic domain (25.2%) Serine protease S9B/DPPIV (25.2%) Alpha/Beta hydrolase fold (24.9%)" VSFTPEQIRDNAKEFISTLIK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0006412 (16.7%) GO:0006417 (16.7%)" GO:0015934 (16.7%) "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" "translation (16.7%) regulation of translation (16.7%)" large ribosomal subunit (16.7%) "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR002143 (16.7%) IPR005878 (16.7%) IPR016095 (16.7%)" "Large ribosomal subunit protein uL1 (16.7%) Large ribosomal subunit protein uL1, bacteria (16.7%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" STLILSDILQSGTLPK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.1.1.1 (100%) alanine racemase (100%) GO:0030632 (19.5%) GO:0005829 (2.3%) "GO:0005524 (19.5%) GO:0008784 (19.5%) GO:0016881 (19.5%)" D-alanine biosynthetic process (19.5%) cytosol (2.3%) "ATP binding (19.5%) alanine racemase activity (19.5%) acid-amino acid ligase activity (19.5%)" "IPR000821 (10.1%) IPR001608 (10.1%) IPR009006 (10.1%)" "Alanine racemase (10.1%) Alanine racemase, N-terminal (10.1%) Alanine racemase/group IV decarboxylase, C-terminal (10.1%)" QTHQPSPWINDYGQFAIMPVVGKPEFDQDKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.2.1.- (100%) Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds (100%) "GO:0005975 (19.5%) GO:0006516 (19.5%)" GO:0005829 (19.5%) "GO:0000224 (19.5%) GO:0030246 (19.5%) GO:0016798 (2.4%)" "carbohydrate metabolic process (19.5%) glycoprotein catabolic process (19.5%)" cytosol (19.5%) "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (19.5%) carbohydrate binding (19.5%) hydrolase activity, acting on glycosyl bonds (2.4%)" "IPR005887 (16.7%) IPR008928 (16.7%) IPR012939 (16.7%)" "Glycosyl hydrolase family 92, alpha-1,2-mannosidase, putative (16.7%) Six-hairpin glycosidase superfamily (16.7%) Glycosyl hydrolase family 92 (16.7%)" NIQQTPVQEIWHNDGDQVLAYQR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) "GO:0005978 (19.4%) GO:0005975 (0.8%)" GO:0005737 (20.2%) "GO:0003844 (20.2%) GO:0043169 (20.2%) GO:0004553 (19.4%)" "glycogen biosynthetic process (19.4%) carbohydrate metabolic process (0.8%)" cytoplasm (20.2%) "1,4-alpha-glucan branching enzyme activity (20.2%) cation binding (20.2%) hydrolase activity, hydrolyzing O-glycosyl compounds (19.4%)" "IPR006048 (12.9%) IPR013780 (12.9%) IPR004193 (12.4%)" "Alpha-amylase/branching enzyme, C-terminal all beta (12.9%) Glycosyl hydrolase, all-beta (12.9%) Glycoside hydrolase, family 13, N-terminal (12.4%)" DMSEAYDKELIR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.2.1 (100%) purine-nucleoside phosphorylase (100%) GO:0009116 (33.2%) GO:0005737 (33.2%) "GO:0004731 (33.2%) GO:0016757 (0.5%)" nucleoside metabolic process (33.2%) cytoplasm (33.2%) "purine-nucleoside phosphorylase activity (33.2%) glycosyltransferase activity (0.5%)" "IPR000845 (24.9%) IPR011268 (24.9%) IPR011270 (24.9%)" "Nucleoside phosphorylase domain (24.9%) Purine nucleoside phosphorylase (24.9%) Purine nucleoside phosphorylase I, inosine/guanosine-specific (24.9%)" VIAGVGVPQLSAIYDVAK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (20%) GO:0006183 (20%)" "GO:0000166 (20%) GO:0003938 (20%) GO:0046872 (20%)" "GMP biosynthetic process (20%) GTP biosynthetic process (20%)" "nucleotide binding (20%) IMP dehydrogenase activity (20%) metal ion binding (20%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" SLVSFIYIGKPLPEFQKK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0015031 (32.3%) GO:0005886 (33.9%) GO:0022857 (33.9%) protein transport (32.3%) plasma membrane (33.9%) transmembrane transporter activity (33.9%) IPR003400 (100%) Biopolymer transport protein ExbD/TolR (100%) AVGFENDKDILEIFNLAEDVKVNK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) GO:0006351 (20%) GO:0000428 (20%) "GO:0003677 (20%) GO:0003899 (20%) GO:0032549 (20%)" DNA-templated transcription (20%) DNA-directed RNA polymerase complex (20%) "DNA binding (20%) DNA-directed RNA polymerase activity (20%) ribonucleoside binding (20%)" "IPR007120 (7.8%) IPR007121 (7.8%) IPR007642 (7.8%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.8%) RNA polymerase, beta subunit, conserved site (7.8%) RNA polymerase Rpb2, domain 2 (7.8%)" VGDTRVDYNDSR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" YNPDVDDAPR root "1.3.5.1 (99.1%) 1.3.99.1 (0.6%) 1.-.-.- (0.3%)" "succinate dehydrogenase (99.1%) Deleted entry (0.6%) Oxidoreductases (0.3%)" "GO:0022904 (12.6%) GO:0006099 (12.6%) GO:0009060 (0.1%)" "GO:0005886 (0.1%) GO:0005743 (0%) GO:0016020 (0%)" "GO:0009055 (12.6%) GO:0051539 (12.1%) GO:0046872 (12.1%)" "respiratory electron transport chain (12.6%) tricarboxylic acid cycle (12.6%) aerobic respiration (0.1%)" "plasma membrane (0.1%) mitochondrial inner membrane (0%) membrane (0%)" "electron transfer activity (12.6%) 4 iron, 4 sulfur cluster binding (12.1%) metal ion binding (12.1%)" "IPR012675 (11.4%) IPR036010 (11.4%) IPR025192 (11.3%)" "Beta-grasp domain superfamily (11.4%) 2Fe-2S ferredoxin-like superfamily (11.4%) Succinate dehydogenase/fumarate reductase N-terminal (11.3%)" FITEVAWQAHFVK root 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.4%) "GO:0005829 (17.3%) GO:0005737 (0%)" "GO:0004612 (17.4%) GO:0005524 (17.4%) GO:0046872 (17%)" gluconeogenesis (17.4%) "cytosol (17.3%) cytoplasm (0%)" "phosphoenolpyruvate carboxykinase (ATP) activity (17.4%) ATP binding (17.4%) metal ion binding (17%)" "IPR001272 (25.4%) IPR008210 (25.4%) IPR013035 (24.9%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.4%) Phosphoenolpyruvate carboxykinase, N-terminal (25.4%) Phosphoenolpyruvate carboxykinase, C-terminal (24.9%)" NNLNEMTSGER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR007139 (100%) Protein of unknown function DUF349 (100%) VNAETPVANDILAAAQDVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) DCVTTSDDPQERK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.- (100%) Transferring other groups (100%) "GO:0000455 (32%) GO:0001522 (0.8%) GO:0006364 (0.8%)" "GO:0003723 (32.8%) GO:0120159 (32%) GO:0009982 (0.8%)" "enzyme-directed rRNA pseudouridine synthesis (32%) pseudouridine synthesis (0.8%) rRNA processing (0.8%)" "RNA binding (32.8%) rRNA pseudouridine synthase activity (32%) pseudouridine synthase activity (0.8%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" IVAICDIQQGPIDR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.2.1.49 (100%) alpha-N-acetylgalactosaminidase (100%) "GO:0000166 (50%) GO:0016798 (44.4%) GO:0008456 (5.6%)" "nucleotide binding (50%) hydrolase activity, acting on glycosyl bonds (44.4%) alpha-N-acetylgalactosaminidase activity (5.6%)" "IPR000683 (18%) IPR006311 (18%) IPR036291 (18%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (18%) Twin-arginine translocation pathway, signal sequence (18%) NAD(P)-binding domain superfamily (18%)" LVSVTHVSNVLGTVNPVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.8.1.7 (100%) cysteine desulfurase (100%) GO:0006534 (31.6%) "GO:0030170 (31.6%) GO:0031071 (31.6%) GO:0008483 (3.5%)" cysteine metabolic process (31.6%) "pyridoxal phosphate binding (31.6%) cysteine desulfurase activity (31.6%) transaminase activity (3.5%)" "IPR000192 (16.5%) IPR010970 (16.5%) IPR015421 (16.5%)" "Aminotransferase class V domain (16.5%) Cysteine desulfurase, SufS (16.5%) Pyridoxal phosphate-dependent transferase, major domain (16.5%)" GGGGLLKEMER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR007139 (100%) Protein of unknown function DUF349 (100%) NYSNIPSLVNLLK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.3.1.1 (100%) dihydrouracil dehydrogenase (NAD(+)) (100%) "GO:0006210 (14.3%) GO:0006212 (14.3%) GO:0006222 (8.6%)" GO:0005737 (14.3%) "GO:0002058 (14.3%) GO:0050661 (14.3%) GO:0004152 (11.4%)" "thymine catabolic process (14.3%) uracil catabolic process (14.3%) UMP biosynthetic process (8.6%)" cytoplasm (14.3%) "uracil binding (14.3%) NADP binding (14.3%) dihydroorotate dehydrogenase activity (11.4%)" "IPR005720 (33.3%) IPR012135 (33.3%) IPR013785 (33.3%)" "Dihydroorotate dehydrogenase, catalytic (33.3%) Dihydroorotate dehydrogenase, class 1/ 2 (33.3%) Aldolase-type TIM barrel (33.3%)" SVTIGNITDAYNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.4.14.4 (100%) dipeptidyl-peptidase III (100%) "GO:0046872 (50%) GO:0016787 (47.6%) GO:0008239 (2.4%)" "metal ion binding (50%) hydrolase activity (47.6%) dipeptidyl-peptidase activity (2.4%)" IPR039461 (100%) Peptidase family M49 (100%) KGNHIFVPDHVTIPYIEGDGVGHEITPVSQK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.42 (100%) isocitrate dehydrogenase (NADP(+)) (100%) "GO:0006097 (20%) GO:0006099 (20%)" "GO:0000287 (20%) GO:0004450 (20%) GO:0051287 (20%)" "glyoxylate cycle (20%) tricarboxylic acid cycle (20%)" "magnesium ion binding (20%) isocitrate dehydrogenase (NADP+) activity (20%) NAD binding (20%)" "IPR004439 (33.3%) IPR019818 (33.3%) IPR024084 (33.3%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (33.3%) Isocitrate/isopropylmalate dehydrogenase, conserved site (33.3%) Isopropylmalate dehydrogenase-like domain (33.3%)" GISAGHSQNSYR root 2.8.1.7 (100%) cysteine desulfurase (100%) "GO:0016226 (98.4%) GO:0006534 (0.1%)" "GO:0009536 (0.3%) GO:1990229 (0.2%) GO:0005737 (0.1%)" "GO:0005524 (0.1%) GO:0016829 (0.1%) GO:0016887 (0.1%)" "iron-sulfur cluster assembly (98.4%) cysteine metabolic process (0.1%)" "plastid (0.3%) iron-sulfur cluster assembly complex (0.2%) cytoplasm (0.1%)" "ATP binding (0.1%) lyase activity (0.1%) ATP hydrolysis activity (0.1%)" "IPR000825 (20.1%) IPR055346 (20.1%) IPR037284 (20.1%)" "SUF system FeS cluster assembly, SufBD core domain (20.1%) SUF system FeS cluster assembly, SufBD (20.1%) SUF system FeS cluster assembly, SufBD superfamily (20.1%)" YRVPGFENLTLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0016787 (50%) GO:0046872 (50%)" "hydrolase activity (50%) metal ion binding (50%)" IPR039461 (100%) Peptidase family M49 (100%) NIGEILELAGCDR root 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (24.9%) GO:0006098 (24.6%) GO:0009052 (0.3%)" "GO:0005829 (24.8%) GO:0005737 (0.1%) GO:0016020 (0.1%)" "GO:0004801 (24.9%) GO:0016740 (0.2%) GO:0016744 (0.1%)" "carbohydrate metabolic process (24.9%) pentose-phosphate shunt (24.6%) pentose-phosphate shunt, non-oxidative branch (0.3%)" "cytosol (24.8%) cytoplasm (0.1%) membrane (0.1%)" "transaldolase activity (24.9%) transferase activity (0.2%) transketolase or transaldolase activity (0.1%)" "IPR001585 (25.2%) IPR013785 (25.2%) IPR018225 (24.8%)" "Transaldolase/Fructose-6-phosphate aldolase (25.2%) Aldolase-type TIM barrel (25.2%) Transaldolase, active site (24.8%)" QASVQAIKEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" ANNDKQLMFTR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0032790 (20%) GO:0005737 (20%) "GO:0003746 (20%) GO:0003924 (20%) GO:0005525 (20%)" ribosome disassembly (20%) cytoplasm (20%) "translation elongation factor activity (20%) GTPase activity (20%) GTP binding (20%)" "IPR000640 (6.3%) IPR000795 (6.3%) IPR004161 (6.3%)" "Elongation factor EFG, domain V-like (6.3%) Translational (tr)-type GTP-binding domain (6.3%) Translation elongation factor EFTu-like, domain 2 (6.3%)" AQGAEIVNEENWGLRK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (16.7%) "GO:0005737 (16.7%) GO:0005840 (16.7%) GO:1990904 (16.7%)" "GO:0003735 (16.7%) GO:0070181 (16.7%)" translation (16.7%) "cytoplasm (16.7%) ribosome (16.7%) ribonucleoprotein complex (16.7%)" "structural constituent of ribosome (16.7%) small ribosomal subunit rRNA binding (16.7%)" "IPR000529 (25%) IPR014717 (25%) IPR020814 (25%)" "Small ribosomal subunit protein bS6 (25%) Translation elongation factor EF1B/small ribosomal subunit protein bS6 (25%) Small ribosomal subunit protein bS6, plastid/chloroplast (25%)" AVVETPEGDTIAIR Bacteria Bacteria 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0005737 (33.3%) "GO:0016407 (33.3%) GO:0031405 (33.3%)" cytoplasm (33.3%) "acetyltransferase activity (33.3%) lipoic acid binding (33.3%)" "IPR000089 (12.6%) IPR001078 (12.6%) IPR011053 (12.6%)" "Biotin/lipoyl attachment (12.6%) 2-oxoacid dehydrogenase acyltransferase, catalytic domain (12.6%) Single hybrid motif (12.6%)" DANADGKGSTEMGAGIVDFK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016853 (100%) isomerase activity (100%) "IPR006311 (20%) IPR013022 (20%) IPR019546 (20%)" "Twin-arginine translocation pathway, signal sequence (20%) Xylose isomerase-like, TIM barrel domain (20%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (20%)" AEILHGISAEELEQLITLIAK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0006950 (21.4%) GO:0045893 (17.7%) GO:0045892 (17.4%)" "GO:0003700 (21.4%) GO:0003677 (21.1%)" "response to stress (21.4%) positive regulation of DNA-templated transcription (17.7%) negative regulation of DNA-templated transcription (17.4%)" "DNA-binding transcription factor activity (21.4%) DNA binding (21.1%)" "IPR036388 (17%) IPR000835 (16.8%) IPR036390 (16.8%)" "Winged helix-like DNA-binding domain superfamily (17%) MarR-type HTH domain (16.8%) Winged helix DNA-binding domain superfamily (16.8%)" AEEYHQDYLDKNPGGYCHINPALFELAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.8.4.12 (50%) 1.8.4.11 (47.6%) 1.8.4.- (2.4%)" "peptide-methionine (R)-S-oxide reductase (50%) peptide-methionine (S)-S-oxide reductase (47.6%) With a disulfide as acceptor (2.4%)" "GO:0006979 (17.9%) GO:0030091 (17.9%)" GO:0005737 (17.9%) "GO:0008113 (17.9%) GO:0033743 (17.9%) GO:0033744 (10.7%)" "response to oxidative stress (17.9%) protein repair (17.9%)" cytoplasm (17.9%) "peptide-methionine (S)-S-oxide reductase activity (17.9%) peptide-methionine (R)-S-oxide reductase activity (17.9%) L-methionine (S)-S-oxide reductase activity (10.7%)" "IPR002569 (20%) IPR002579 (20%) IPR011057 (20%)" "Peptide methionine sulphoxide reductase MsrA domain (20%) Peptide methionine sulphoxide reductase MrsB domain (20%) Mss4-like superfamily (20%)" YLLVVNAGNIDKDWDWCVSHNTVGAELENSSDR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.1.2.10 (100%) aminomethyltransferase (100%) "GO:0019464 (15.8%) GO:0032259 (10.5%)" "GO:0005829 (15.8%) GO:0005960 (15.8%)" "GO:0004047 (15.8%) GO:0008483 (15.8%) GO:0008168 (10.5%)" "glycine decarboxylation via glycine cleavage system (15.8%) methylation (10.5%)" "cytosol (15.8%) glycine cleavage complex (15.8%)" "aminomethyltransferase activity (15.8%) transaminase activity (15.8%) methyltransferase activity (10.5%)" "IPR006222 (14.3%) IPR006223 (14.3%) IPR013977 (14.3%)" "GCVT, N-terminal domain (14.3%) Glycine cleavage system T protein (14.3%) Aminomethyltransferase, C-terminal domain (14.3%)" ITPKGESDPSPEEK Bacteroidota Bacteria Pseudomonadati Bacteroidota 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (19.8%) GO:0006508 (0.4%)" GO:0000428 (19.9%) "GO:0003677 (19.8%) GO:0003899 (19.8%) GO:0032549 (19.8%)" "DNA-templated transcription (19.8%) proteolysis (0.4%)" DNA-directed RNA polymerase complex (19.9%) "DNA binding (19.8%) DNA-directed RNA polymerase activity (19.8%) ribonucleoside binding (19.8%)" "IPR007120 (7.9%) IPR015712 (7.9%) IPR014724 (7.9%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.9%) DNA-directed RNA polymerase, subunit 2 (7.9%) RNA polymerase Rpb2, OB-fold (7.9%)" SGGGGGGGGCGGGGGVSSLR Homo sapiens Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Euarchontoglires Primates Haplorrhini Simiiformes Hominoidea Hominidae Homininae Homo Homo sapiens "GO:0008544 (4.3%) GO:0018149 (4.3%) GO:0030216 (4.3%)" "GO:0005829 (8.7%) GO:0005882 (8.7%) GO:0001533 (4.3%)" "GO:0005198 (4.3%) GO:0030280 (4.3%) GO:0046982 (4.3%)" "epidermis development (4.3%) peptide cross-linking (4.3%) keratinocyte differentiation (4.3%)" "cytosol (8.7%) intermediate filament (8.7%) cornified envelope (4.3%)" "structural molecule activity (4.3%) structural constituent of skin epidermis (4.3%) protein heterodimerization activity (4.3%)" "IPR002957 (33.3%) IPR018039 (33.3%) IPR039008 (33.3%)" "Keratin, type I (33.3%) Intermediate filament protein, conserved site (33.3%) Intermediate filament, rod domain (33.3%)" GMLVTELNAGQMVEDVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.1 (36.4%) 1.2.7.7 (27.3%) 1.2.-.- (18.2%)" "pyruvate synthase (36.4%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) (27.3%) Acting on the aldehyde or oxo group of donors (18.2%)" "GO:0016491 (82.4%) GO:0019164 (9.8%) GO:0043807 (7.8%)" "oxidoreductase activity (82.4%) pyruvate synthase activity (9.8%) 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity (7.8%)" "IPR002880 (20%) IPR009014 (20%) IPR029061 (20%)" "Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (20%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (20%) Thiamin diphosphate-binding fold (20%)" KQPSELIATGIAGIDLNNTIVTGQK Pseudomonadati Bacteria Pseudomonadati 3.6.3.14 (100%) Transferred entry: 7.1.2.2 (100%) "GO:0046034 (23.7%) GO:1902600 (23.7%) GO:0006811 (10.5%)" "GO:0005524 (34.2%) GO:0016787 (7.9%)" "ATP metabolic process (23.7%) proton transmembrane transport (23.7%) monoatomic ion transport (10.5%)" "ATP binding (34.2%) hydrolase activity (7.9%)" "IPR000194 (21.4%) IPR022879 (21.4%) IPR027417 (21.4%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (21.4%) V-type ATP synthase regulatory subunit B/beta (21.4%) P-loop containing nucleoside triphosphate hydrolase (21.4%)" DENGLPVATHFSVPTEGLR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0008097 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) 5S rRNA binding (25%)" "IPR001021 (14.3%) IPR011035 (14.3%) IPR020056 (14.3%)" "Ribosomal protein bL25, long-form (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily (14.3%) Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal (14.3%)" MTNGDNEIIIANR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.6.2.2 (100%) DNA topoisomerase (ATP-hydrolyzing) (100%) "GO:0006265 (12.7%) GO:0006261 (11.8%)" "GO:0005737 (12.7%) GO:0009330 (12.7%) GO:0005694 (12%)" "GO:0003677 (12.7%) GO:0005524 (12.7%) GO:0034335 (11.8%)" "DNA topological change (12.7%) DNA-templated DNA replication (11.8%)" "cytoplasm (12.7%) DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (12.7%) chromosome (12%)" "DNA binding (12.7%) ATP binding (12.7%) DNA negative supercoiling activity (11.8%)" "IPR002205 (12.7%) IPR006691 (12.7%) IPR050220 (12.7%)" "DNA topoisomerase, type IIA, domain A (12.7%) DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat (12.7%) Type II DNA Topoisomerases (12.7%)" DCVTTSDDPQER Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.- (100%) Transferring other groups (100%) "GO:0000455 (32%) GO:0001522 (0.8%) GO:0006364 (0.8%)" "GO:0003723 (32.8%) GO:0120159 (32%) GO:0009982 (0.8%)" "enzyme-directed rRNA pseudouridine synthesis (32%) pseudouridine synthesis (0.8%) rRNA processing (0.8%)" "RNA binding (32.8%) rRNA pseudouridine synthase activity (32%) pseudouridine synthase activity (0.8%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" SYHVDIVDTQKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.1.1.70 (100%) Transferred entry: 7.2.4.5 (100%) GO:0016829 (100%) lyase activity (100%) "IPR000089 (33.3%) IPR011053 (33.3%) IPR050709 (33.3%)" "Biotin/lipoyl attachment (33.3%) Single hybrid motif (33.3%) Biotin Carboxyl Carrier/Decarboxylase Components (33.3%)" LIVEVAQHVGDDTVR Tissierella simiarum Bacteria Bacillati Bacillota Tissierellia Tissierellales Tissierellaceae Tissierella Tissierella simiarum MEVNVLNIKGEDTGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0019843 (18.9%) GO:0003723 (1.1%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) rRNA binding (18.9%) RNA binding (1.1%)" "IPR002136 (33.3%) IPR013005 (33.3%) IPR023574 (33.3%)" "Large ribosomal subunit protein uL4 (33.3%) Large ribosomal subunit protein uL4-like (33.3%) Large ribosomal subunit protein uL4 domain superfamily (33.3%)" ITTVQAAIDYINGHQA root "GO:0009245 (17%) GO:0036104 (13.4%) GO:0006633 (0.1%)" "GO:0005829 (17%) GO:0016020 (17%) GO:0009360 (0.1%)" "GO:0000035 (17%) GO:0000036 (17%) GO:0003677 (0.1%)" "lipid A biosynthetic process (17%) Kdo2-lipid A biosynthetic process (13.4%) fatty acid biosynthetic process (0.1%)" "cytosol (17%) membrane (17%) DNA polymerase III complex (0.1%)" "acyl binding (17%) acyl carrier activity (17%) DNA binding (0.1%)" "IPR009081 (24.2%) IPR036736 (24.2%) IPR003231 (24.1%)" "Phosphopantetheine binding ACP domain (24.2%) ACP-like superfamily (24.2%) Acyl carrier protein (24.1%)" ALMEYDESLRSELR Pseudomonadota Bacteria Pseudomonadati Pseudomonadota "GO:0006412 (24.6%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0022627 (24.7%) GO:0005840 (0.9%) GO:0005737 (0.1%)" "GO:0003735 (24.7%) GO:0003723 (24.5%) GO:0000049 (0.3%)" "translation (24.6%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (24.7%) ribosome (0.9%) cytoplasm (0.1%)" "structural constituent of ribosome (24.7%) RNA binding (24.5%) tRNA binding (0.3%)" "IPR000754 (20%) IPR014721 (20%) IPR020568 (20%)" "Small ribosomal subunit protein uS9 (20%) Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (20%) Ribosomal protein uS5 domain 2-type superfamily (20%)" NIHFMGLTSNGGVHSSFDHLFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.4.2.12 (100%) phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (100%) "GO:0006007 (19.9%) GO:0006096 (19.9%)" GO:0005829 (19.9%) "GO:0004619 (19.9%) GO:0030145 (19.9%) GO:0016853 (0.3%)" "glucose catabolic process (19.9%) glycolytic process (19.9%)" cytosol (19.9%) "phosphoglycerate mutase activity (19.9%) manganese ion binding (19.9%) isomerase activity (0.3%)" "IPR005995 (20.1%) IPR011258 (20.1%) IPR036646 (20.1%)" "Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (20.1%) BPG-independent PGAM, N-terminal (20.1%) BPG-independent phosphoglycerate mutase, domain B superfamily (20.1%)" AGSQVSGPVPLPTEK Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0006412 (20%) "GO:0005840 (20%) GO:1990904 (20%)" "GO:0003735 (20%) GO:0000049 (19.2%) GO:0003723 (0.8%)" translation (20%) "ribosome (20%) ribonucleoprotein complex (20%)" "structural constituent of ribosome (20%) tRNA binding (19.2%) RNA binding (0.8%)" "IPR001848 (25%) IPR018268 (25%) IPR027486 (25%)" "Small ribosomal subunit protein uS10 (25%) Small ribosomal subunit protein uS10, conserved site (25%) Small ribosomal subunit protein uS10 domain (25%)" IYAELAGVGASADAYHLTASHPEGLGAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.3.1.179 (100%) beta-ketoacyl-[acyl-carrier-protein] synthase II (100%) GO:0006633 (33.3%) GO:0005829 (33.3%) GO:0004315 (33.3%) fatty acid biosynthetic process (33.3%) cytosol (33.3%) 3-oxoacyl-[acyl-carrier-protein] synthase activity (33.3%) "IPR000794 (14.3%) IPR014030 (14.3%) IPR014031 (14.3%)" "Beta-ketoacyl synthase (14.3%) Beta-ketoacyl synthase-like, N-terminal (14.3%) Beta-ketoacyl synthase, C-terminal (14.3%)" HLCALRDEVIAMGVLPPVNEWNK TDMILNMLSALTAALGGTK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae SAGMMITPNSTGAGGSSK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0009279 (49.1%) "GO:0015344 (49.1%) GO:0004180 (1.9%)" cell outer membrane (49.1%) "siderophore uptake transmembrane transporter activity (49.1%) carboxypeptidase activity (1.9%)" "IPR008969 (14.3%) IPR012910 (14.3%) IPR023996 (14.3%)" "Carboxypeptidase-like, regulatory domain superfamily (14.3%) TonB-dependent receptor, plug domain (14.3%) TonB-dependent outer membrane protein, SusC/RagA (14.3%)" AMDVYCHR root "2.7.2.1 (99.9%) 2.7.2.15 (0.1%)" "acetate kinase (99.9%) propionate kinase (0.1%)" "GO:0006083 (16.7%) GO:0006085 (16.4%) GO:0019413 (0%)" "GO:0005829 (16.7%) GO:0005737 (0%) GO:0016020 (0%)" "GO:0008776 (16.7%) GO:0005524 (16.5%) GO:0000287 (16.4%)" "acetate metabolic process (16.7%) acetyl-CoA biosynthetic process (16.4%) acetate biosynthetic process (0%)" "cytosol (16.7%) cytoplasm (0%) membrane (0%)" "acetate kinase activity (16.7%) ATP binding (16.5%) magnesium ion binding (16.4%)" "IPR000890 (25.2%) IPR043129 (25.2%) IPR004372 (24.9%)" "Aliphatic acid kinase, short-chain (25.2%) ATPase, nucleotide binding domain (25.2%) Acetate/propionate kinase (24.9%)" KILDNAEAGDNVGLLLR LSTEEIQVNVIHK Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.4%) IPR000795 (8.4%) IPR005225 (8.4%)" "Translation initiation factor IF-2, bacterial-like (8.4%) Translational (tr)-type GTP-binding domain (8.4%) Small GTP-binding domain (8.4%)" ITESSAWLAESIVGEKTPK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR006015 (48.5%) IPR006016 (48.5%) IPR014729 (3%)" "Universal stress protein A family (48.5%) UspA (48.5%) Rossmann-like alpha/beta/alpha sandwich fold (3%)" SGSSYLSAETDKTSADYGK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) FGGNEVKVDGEK Collinsella aerofaciens Bacteria Bacillati Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella aerofaciens GO:0005737 (16.7%) "GO:0005524 (16.7%) GO:0044183 (16.7%) GO:0046872 (16.7%)" cytoplasm (16.7%) "ATP binding (16.7%) protein folding chaperone (16.7%) metal ion binding (16.7%)" "IPR011032 (25%) IPR018369 (25%) IPR020818 (25%)" "GroES-like superfamily (25%) Chaperonin GroES, conserved site (25%) GroES chaperonin family (25%)" GGAAEWDVHDGVFTVNKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "GO:0016787 (87.5%) GO:0046872 (12.5%)" "hydrolase activity (87.5%) metal ion binding (12.5%)" IPR010496 (100%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (100%) EKESTAPVEVVEQEEEVVEVAPVSKPR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0051301 (16.7%) GO:0042834 (83.3%) cell division (16.7%) peptidoglycan binding (83.3%) "IPR007730 (33.3%) IPR036680 (33.3%) IPR052521 (33.3%)" "Sporulation-like domain (33.3%) Sporulation-like domain superfamily (33.3%) Bacterial cell division SPOR domain-containing protein (33.3%)" AQYQPLMDLLNEK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "2.1.2.3 (50%) 3.5.4.10 (50%)" "phosphoribosylaminoimidazolecarboxamide formyltransferase (50%) IMP cyclohydrolase (50%)" GO:0006189 (25%) GO:0005829 (25%) "GO:0003937 (25%) GO:0004643 (25%)" 'de novo' IMP biosynthetic process (25%) cytosol (25%) "IMP cyclohydrolase activity (25%) phosphoribosylaminoimidazolecarboxamide formyltransferase activity (25%)" "IPR002695 (20%) IPR011607 (20%) IPR016193 (20%)" "Bifunctional purine biosynthesis protein PurH-like (20%) Methylglyoxal synthase-like domain (20%) Cytidine deaminase-like (20%)" SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "3.5.4.- (68.4%) 3.5.99.10 (26.3%) 2.5.1.7 (5.3%)" "In cyclic amidines (68.4%) 2-iminobutanoate/2-iminopropanoate deaminase (26.3%) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (5.3%)" "GO:0009097 (1.5%) GO:0009636 (1.5%) GO:0070207 (0.5%)" "GO:0005829 (46%) GO:0016020 (0.5%) GO:0032991 (0.5%)" "GO:0019239 (44.4%) GO:0120242 (1.5%) GO:0120243 (1.5%)" "isoleucine biosynthetic process (1.5%) response to toxic substance (1.5%) protein homotrimerization (0.5%)" "cytosol (46%) membrane (0.5%) protein-containing complex (0.5%)" "deaminase activity (44.4%) 2-iminobutanoate deaminase activity (1.5%) 2-iminopropanoate deaminase activity (1.5%)" "IPR006175 (26%) IPR035959 (26%) IPR006056 (24.7%)" "YjgF/YER057c/UK114 family (26%) RutC-like superfamily (26%) RidA family (24.7%)" SGIVHTSVGK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0006412 (16.7%) GO:0006417 (16.7%)" GO:0015934 (16.7%) "GO:0000049 (16.7%) GO:0003735 (16.7%) GO:0019843 (16.7%)" "translation (16.7%) regulation of translation (16.7%)" large ribosomal subunit (16.7%) "tRNA binding (16.7%) structural constituent of ribosome (16.7%) rRNA binding (16.7%)" "IPR002143 (16.7%) IPR005878 (16.7%) IPR016095 (16.7%)" "Large ribosomal subunit protein uL1 (16.7%) Large ribosomal subunit protein uL1, bacteria (16.7%) Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (16.7%)" MEDLEGLKTTDALPGEFPYLR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019652 (25.2%) "GO:0004494 (25.2%) GO:0031419 (25.2%) GO:0046872 (24.2%)" lactate fermentation to propionate and acetate (25.2%) "methylmalonyl-CoA mutase activity (25.2%) cobalamin binding (25.2%) metal ion binding (24.2%)" "IPR004608 (25.2%) IPR006099 (25.2%) IPR016176 (25.2%)" "Methylmalonyl-CoA mutase, small subunit (25.2%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (25.2%) Cobalamin (vitamin B12)-dependent enzyme, catalytic (25.2%)" QYQPVNGNIVFKK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033104 (100%) type VI protein secretion system complex (100%) IPR041408 (100%) Hemolysin coregulated protein (Hcp) TssD (100%) DASGTINVDIDHKR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "GO:0044011 (1%) GO:0070301 (1%) GO:0071276 (1%)" "GO:0042597 (96%) GO:0030288 (1%)" "single-species biofilm formation on inanimate substrate (1%) cellular response to hydrogen peroxide (1%) cellular response to cadmium ion (1%)" "periplasmic space (96%) outer membrane-bounded periplasmic space (1%)" "IPR005220 (25.2%) IPR036700 (25.2%) IPR052401 (25.2%)" "Calcium-regulated OB-fold protein CarO-like (25.2%) Bacterial OB-fold superfamily (25.2%) Unknown (25.2%)" VSVIFDKPTDADKLHLK Streptococcus Bacteria Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus "GO:0005576 (50%) GO:0016020 (50%)" "extracellular region (50%) membrane (50%)" "IPR019931 (17.5%) IPR031792 (15.9%) IPR038183 (15.9%)" "LPXTG cell wall anchor domain (17.5%) Surface antigen, GAG-binding domain (15.9%) RICH domain superfamily (15.9%)" KRPYSVVLFDEIEK root "GO:0034605 (19.1%) GO:0043335 (8.8%) GO:0006508 (7.4%)" GO:0005737 (19.1%) "GO:0005524 (19.1%) GO:0016887 (19.1%) GO:0008233 (7.4%)" "cellular response to heat (19.1%) protein unfolding (8.8%) proteolysis (7.4%)" cytoplasm (19.1%) "ATP binding (19.1%) ATP hydrolysis activity (19.1%) peptidase activity (7.4%)" "IPR001270 (9.6%) IPR003593 (9.6%) IPR003959 (9.6%)" "ClpA/B family (9.6%) AAA+ ATPase domain (9.6%) ATPase, AAA-type, core (9.6%)" GLYAIGEANFSDHGANR root "1.3.5.1 (99.1%) 1.3.5.4 (0.9%)" "succinate dehydrogenase (99.1%) Transferred entry: 1.3.5.1 (0.9%)" GO:0009061 (19.9%) GO:0005886 (19.9%) "GO:0009055 (19.9%) GO:0050660 (19.9%) GO:0000104 (16.1%)" anaerobic respiration (19.9%) plasma membrane (19.9%) "electron transfer activity (19.9%) flavin adenine dinucleotide binding (19.9%) succinate dehydrogenase activity (16.1%)" "IPR003953 (14.3%) IPR015939 (14.3%) IPR030664 (14.3%)" "FAD-dependent oxidoreductase 2, FAD-binding domain (14.3%) Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (14.3%) FAD-dependent oxidoreductase SdhA/FrdA/AprA (14.3%)" IFSAQVWEPENPYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.4.1.18 (100%) 1,4-alpha-glucan branching enzyme (100%) GO:0005978 (20%) "GO:0005737 (20%) GO:0016020 (1.1%)" "GO:0003844 (20%) GO:0004553 (20%) GO:0043169 (18.9%)" glycogen biosynthetic process (20%) "cytoplasm (20%) membrane (1.1%)" "1,4-alpha-glucan branching enzyme activity (20%) hydrolase activity, hydrolyzing O-glycosyl compounds (20%) cation binding (18.9%)" "IPR004193 (12.7%) IPR006047 (12.7%) IPR013783 (12.7%)" "Glycoside hydrolase, family 13, N-terminal (12.7%) Glycosyl hydrolase family 13, catalytic domain (12.7%) Immunoglobulin-like fold (12.7%)" DVLGLADANSTEMEPNTAHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (12.2%) GO:0044210 (12.2%)" "GO:0005829 (12.2%) GO:0097268 (12.2%)" "GO:0003883 (12.2%) GO:0005524 (12.2%) GO:0042802 (12.2%)" "pyrimidine nucleobase biosynthetic process (12.2%) 'de novo' CTP biosynthetic process (12.2%)" "cytosol (12.2%) cytoophidium (12.2%)" "CTP synthase activity (12.2%) ATP binding (12.2%) identical protein binding (12.2%)" "IPR004468 (16.7%) IPR017456 (16.7%) IPR017926 (16.7%)" "CTP synthase (16.7%) CTP synthase, N-terminal (16.7%) Glutamine amidotransferase (16.7%)" MKDDDFIVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.- (50%) 5.4.2.2 (50%)" "Phosphotransferases (phosphomutases) (50%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (50%)" "GO:0005975 (23.9%) GO:0006166 (23.9%)" "GO:0000287 (23.9%) GO:0008973 (23.9%) GO:0004614 (4.5%)" "carbohydrate metabolic process (23.9%) purine ribonucleoside salvage (23.9%)" "magnesium ion binding (23.9%) phosphopentomutase activity (23.9%) phosphoglucomutase activity (4.5%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" SYGGAYCVMSSK root "6.4.1.3 (94.3%) 2.1.3.1 (2.9%) 6.-.-.- (2.9%)" "propionyl-CoA carboxylase (94.3%) methylmalonyl-CoA carboxytransferase (2.9%) Ligases (2.9%)" "GO:0015977 (11.8%) GO:0009062 (9.2%) GO:0006633 (1.8%)" "GO:0009317 (13.3%) GO:0005739 (12.5%) GO:0016020 (0.4%)" "GO:0004658 (29.5%) GO:0003989 (13.3%) GO:0016740 (7.7%)" "carbon fixation (11.8%) fatty acid catabolic process (9.2%) fatty acid biosynthetic process (1.8%)" "acetyl-CoA carboxylase complex (13.3%) mitochondrion (12.5%) membrane (0.4%)" "propionyl-CoA carboxylase activity (29.5%) acetyl-CoA carboxylase activity (13.3%) transferase activity (7.7%)" "IPR011763 (20.1%) IPR029045 (20.1%) IPR034733 (20.1%)" "Acetyl-coenzyme A carboxyltransferase, C-terminal (20.1%) ClpP/crotonase-like domain superfamily (20.1%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.1%)" YLGEHGGIASTSYGDQYGSVPSSAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (97.5%) GO:0004180 (2.5%) cell outer membrane (97.5%) carboxypeptidase activity (2.5%) "IPR012910 (14.8%) IPR039426 (14.8%) IPR023996 (14.4%)" "TonB-dependent receptor, plug domain (14.8%) TonB-dependent receptor-like (14.8%) TonB-dependent outer membrane protein, SusC/RagA (14.4%)" VGISTSVSVDHATPAAFYAHQGQR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.1.3.1 (100%) alkaline phosphatase (100%) "GO:0004035 (51.2%) GO:0046872 (48.8%)" "alkaline phosphatase activity (51.2%) metal ion binding (48.8%)" "IPR001952 (33.3%) IPR017850 (33.3%) IPR018299 (33.3%)" "Alkaline phosphatase (33.3%) Alkaline-phosphatase-like, core domain superfamily (33.3%) Alkaline phosphatase, active site (33.3%)" LKNENGLDYTAAQISCANGAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.6.1.- (100%) Transaminases (100%) GO:0006520 (33.3%) "GO:0008483 (33.3%) GO:0030170 (33.3%)" amino acid metabolic process (33.3%) "transaminase activity (33.3%) pyridoxal phosphate binding (33.3%)" "IPR004838 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferases, class-I, pyridoxal-phosphate-binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" GVVSLPHGTGK root "GO:0006412 (16.8%) GO:0006417 (16.3%)" "GO:0015934 (15.7%) GO:0022625 (1.1%) GO:0005840 (0.2%)" "GO:0003735 (16.8%) GO:0019843 (16.8%) GO:0000049 (16.2%)" "translation (16.8%) regulation of translation (16.3%)" "large ribosomal subunit (15.7%) cytosolic large ribosomal subunit (1.1%) ribosome (0.2%)" "structural constituent of ribosome (16.8%) rRNA binding (16.8%) tRNA binding (16.2%)" "IPR028364 (16.8%) IPR023673 (16.7%) IPR023674 (16.7%)" "Ribosomal protein uL1/ribosomal biogenesis protein (16.8%) Large ribosomal subunit protein uL1, conserved site (16.7%) Ribosomal protein uL1-like (16.7%)" ATMIVALQEDLAKK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides FATSDLNDLYR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.5%) GO:0006281 (0%) GO:0006412 (0%)" "GO:0000428 (16.6%) GO:0005829 (3.3%) GO:0009507 (0%)" "GO:0003677 (16.5%) GO:0003899 (16.5%) GO:0000287 (14.7%)" "DNA-templated transcription (16.5%) DNA repair (0%) translation (0%)" "DNA-directed RNA polymerase complex (16.6%) cytosol (3.3%) chloroplast (0%)" "DNA binding (16.5%) DNA-directed RNA polymerase activity (16.5%) magnesium ion binding (14.7%)" "IPR007080 (9.6%) IPR045867 (9.6%) IPR006592 (9.4%)" "RNA polymerase Rpb1, domain 1 (9.6%) DNA-directed RNA polymerase, subunit beta-prime (9.6%) RNA polymerase, N-terminal (9.4%)" AKVNMTDGEIAAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.5.1.6 (100%) methionine adenosyltransferase (100%) "GO:0006556 (16.7%) GO:0006730 (16.7%)" GO:0005737 (16.7%) "GO:0000287 (16.7%) GO:0004478 (16.7%) GO:0005524 (16.7%)" "S-adenosylmethionine biosynthetic process (16.7%) one-carbon metabolic process (16.7%)" cytoplasm (16.7%) "magnesium ion binding (16.7%) methionine adenosyltransferase activity (16.7%) ATP binding (16.7%)" "IPR002133 (16.7%) IPR022628 (16.7%) IPR022629 (16.7%)" "S-adenosylmethionine synthetase (16.7%) S-adenosylmethionine synthetase, N-terminal (16.7%) S-adenosylmethionine synthetase, central domain (16.7%)" TKEPGANGEPLYLDVKDCFYGAENAPVIVGGR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.7.1 (73.9%) 1.2.7.- (26.1%)" "pyruvate synthase (73.9%) With an iron-sulfur protein as acceptor (26.1%)" "GO:0006979 (14.7%) GO:0022900 (14.7%) GO:0044281 (11.8%)" "GO:0005506 (14.7%) GO:0051539 (14.7%) GO:0030976 (14.5%)" "response to oxidative stress (14.7%) electron transport chain (14.7%) small molecule metabolic process (11.8%)" "iron ion binding (14.7%) 4 iron, 4 sulfur cluster binding (14.7%) thiamine pyrophosphate binding (14.5%)" "IPR002869 (7.7%) IPR002880 (7.7%) IPR009014 (7.7%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.7%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (7.7%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.7%)" QEDGYVNYVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006537 (26.1%) GO:0005829 (23.9%) "GO:0004354 (26.1%) GO:0000166 (23.9%)" glutamate biosynthetic process (26.1%) cytosol (23.9%) "glutamate dehydrogenase (NADP+) activity (26.1%) nucleotide binding (23.9%)" "IPR006095 (11.1%) IPR006096 (11.1%) IPR006097 (11.1%)" "Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal (11.1%) Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain (11.1%)" VCTDAVLAAIDIEKEAGAEWLKDCR Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.5.99.6 (100%) glucosamine-6-phosphate deaminase (100%) "GO:0005975 (33.3%) GO:0006044 (33.3%)" GO:0004342 (33.3%) "carbohydrate metabolic process (33.3%) N-acetylglucosamine metabolic process (33.3%)" glucosamine-6-phosphate deaminase activity (33.3%) "IPR003737 (14.6%) IPR004547 (14.6%) IPR006148 (14.6%)" "N-acetylglucosaminyl phosphatidylinositol deacetylase-related (14.6%) Glucosamine-6-phosphate isomerase (14.6%) Glucosamine/galactosamine-6-phosphate isomerase (14.6%)" SQTLETVTPESSYLAGLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 2.7.1.162 (100%) N-acetylhexosamine 1-kinase (100%) "GO:0016740 (87.5%) GO:0016301 (12.5%)" "transferase activity (87.5%) kinase activity (12.5%)" "IPR002575 (33.3%) IPR011009 (33.3%) IPR050249 (33.3%)" "Aminoglycoside phosphotransferase (33.3%) Protein kinase-like domain superfamily (33.3%) Pseudomonas-type Homoserine Kinase (33.3%)" YSDVYGLKPLIR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.6.99.2 (100%) pyridoxine 5'-phosphate synthase (100%) GO:0008615 (33.3%) GO:0005829 (33.3%) GO:0033856 (33.3%) pyridoxine biosynthetic process (33.3%) cytosol (33.3%) pyridoxine 5'-phosphate synthase activity (33.3%) "IPR004569 (33.3%) IPR013785 (33.3%) IPR036130 (33.3%)" "Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ (33.3%) Aldolase-type TIM barrel (33.3%) Pyridoxine 5'-phosphate synthase (33.3%)" KLPIFPVEQIEMQAHGSK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016787 (100%) hydrolase activity (100%) "IPR004155 (25%) IPR010496 (25%) IPR011989 (25%)" "PBS lyase HEAT-like repeat (25%) 3-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domain (25%) Armadillo-like helical (25%)" FAIIDAVNGEEYLSGLAECFHLPEAR root "2.7.2.1 (99.3%) 2.7.2.7 (0.7%)" "acetate kinase (99.3%) butyrate kinase (0.7%)" "GO:0006083 (16.6%) GO:0006085 (15.8%) GO:0019413 (0.1%)" "GO:0005829 (16.6%) GO:0016020 (0.1%)" "GO:0005524 (16.7%) GO:0008776 (16.6%) GO:0000287 (15.8%)" "acetate metabolic process (16.6%) acetyl-CoA biosynthetic process (15.8%) acetate biosynthetic process (0.1%)" "cytosol (16.6%) membrane (0.1%)" "ATP binding (16.7%) acetate kinase activity (16.6%) magnesium ion binding (15.8%)" "IPR000890 (25.3%) IPR023865 (25.3%) IPR043129 (25.3%)" "Aliphatic acid kinase, short-chain (25.3%) Aliphatic acid kinase, short-chain, conserved site (25.3%) ATPase, nucleotide binding domain (25.3%)" IVTDSMPSNELMVSHGGYDNGDVNKDINCMFPIDR AIVPSGASTGAFEAVELRDGDKDR Bacillati Bacteria Bacillati 4.2.1.11 (100%) phosphopyruvate hydratase (100%) GO:0006096 (16.7%) "GO:0000015 (16.7%) GO:0005576 (16.7%) GO:0009986 (16.7%)" "GO:0000287 (16.7%) GO:0004634 (16.7%)" glycolytic process (16.7%) "phosphopyruvate hydratase complex (16.7%) extracellular region (16.7%) cell surface (16.7%)" "magnesium ion binding (16.7%) phosphopyruvate hydratase activity (16.7%)" "IPR000941 (17.2%) IPR020809 (17.2%) IPR020810 (17.2%)" "Enolase (17.2%) Enolase, conserved site (17.2%) Enolase, C-terminal TIM barrel domain (17.2%)" HVFNGMGYDGDNISPHLAWDDVPAGTK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria GO:0005737 (2.9%) GO:0004860 (97.1%) cytoplasm (2.9%) protein kinase inhibitor activity (97.1%) "IPR005247 (33.3%) IPR008914 (33.3%) IPR036610 (33.3%)" "YbhB/YbcL/LppC-like (33.3%) Phosphatidylethanolamine-binding protein (33.3%) PEBP-like superfamily (33.3%)" LYDGDECFTIKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.20 (100%) phenylalanine--tRNA ligase (100%) GO:0006432 (16.9%) GO:0009328 (16.9%) "GO:0000049 (16.9%) GO:0004826 (16.9%) GO:0000287 (16.3%)" phenylalanyl-tRNA aminoacylation (16.9%) phenylalanine-tRNA ligase complex (16.9%) "tRNA binding (16.9%) phenylalanine-tRNA ligase activity (16.9%) magnesium ion binding (16.3%)" "IPR002547 (7.8%) IPR005146 (7.8%) IPR012340 (7.8%)" "tRNA-binding domain (7.8%) B3/B4 tRNA-binding domain (7.8%) Nucleic acid-binding, OB-fold (7.8%)" SKVTVVGAGNVGATCANVLAFNEVADEVVMLDVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (25%) GO:0006099 (24.6%) GO:0019752 (0.2%)" GO:0005737 (0.2%) "GO:0004459 (25%) GO:0030060 (25%) GO:0016491 (0.2%)" "lactate metabolic process (25%) tricarboxylic acid cycle (24.6%) carboxylic acid metabolic process (0.2%)" cytoplasm (0.2%) "L-lactate dehydrogenase (NAD+) activity (25%) L-malate dehydrogenase (NAD+) activity (25%) oxidoreductase activity (0.2%)" "IPR001236 (16.7%) IPR011275 (16.7%) IPR022383 (16.7%)" "Lactate/malate dehydrogenase, N-terminal (16.7%) Malate dehydrogenase, type 3 (16.7%) Lactate/malate dehydrogenase, C-terminal (16.7%)" TIAASFGNVHGVYKPGNVVLTPTILR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "4.1.2.13 (99.9%) 4.1.2.- (0.1%)" "fructose-bisphosphate aldolase (99.9%) Aldehyde-lyases (0.1%)" "GO:0006094 (20%) GO:0006096 (20%)" GO:0005829 (20%) "GO:0004332 (20%) GO:0008270 (20%) GO:0016829 (0.1%)" "gluconeogenesis (20%) glycolytic process (20%)" cytosol (20%) "fructose-bisphosphate aldolase activity (20%) zinc ion binding (20%) lyase activity (0.1%)" "IPR000771 (33.3%) IPR006411 (33.3%) IPR013785 (33.3%)" "Fructose-bisphosphate aldolase, class-II (33.3%) Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype (33.3%) Aldolase-type TIM barrel (33.3%)" LGADAVIVHHGYFWK root "GO:0006281 (27.1%) GO:0005975 (0.3%) GO:0010212 (0.3%)" "GO:0005737 (31.6%) GO:0005829 (0.3%) GO:0060187 (0.3%)" "GO:0046872 (32.2%) GO:0016787 (7.1%) GO:0005524 (0.3%)" "DNA repair (27.1%) carbohydrate metabolic process (0.3%) response to ionizing radiation (0.3%)" "cytoplasm (31.6%) cytosol (0.3%) cell pole (0.3%)" "metal ion binding (32.2%) hydrolase activity (7.1%) ATP binding (0.3%)" "IPR002678 (48.4%) IPR036069 (48.4%) IPR003778 (0.4%)" "DUF34/NIF3 (48.4%) DUF34/NIF3 superfamily (48.4%) Carboxyltransferase domain, subdomain A and B (0.4%)" GITINIAHIEYQTEKR root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) GO:0005829 (19.7%) "GO:0003746 (19.9%) GO:0003924 (19.7%) GO:0005525 (19.7%)" cytosol (19.7%) "translation elongation factor activity (19.9%) GTPase activity (19.7%) GTP binding (19.7%)" "IPR000795 (8.5%) IPR004160 (8.5%) IPR004161 (8.5%)" "Translational (tr)-type GTP-binding domain (8.5%) Translation elongation factor EFTu/EF1A, C-terminal (8.5%) Translation elongation factor EFTu-like, domain 2 (8.5%)" ATRTESDLIGER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 4.3.1.1 (100%) aspartate ammonia-lyase (100%) "GO:0006099 (24.7%) GO:0006531 (24.7%)" GO:0005829 (24.7%) "GO:0008797 (24.7%) GO:0016853 (1.3%)" "tricarboxylic acid cycle (24.7%) aspartate metabolic process (24.7%)" cytosol (24.7%) "aspartate ammonia-lyase activity (24.7%) isomerase activity (1.3%)" "IPR000362 (12.6%) IPR008948 (12.6%) IPR018951 (12.6%)" "Fumarate lyase family (12.6%) L-Aspartase-like (12.6%) Fumarase C, C-terminal (12.6%)" LGFTAQNVYNQVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (24.2%) GO:0047896 (0.8%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (24.2%) formaldehyde transketolase activity (0.8%)" "IPR009014 (12.8%) IPR033247 (12.8%) IPR055152 (12.8%)" "Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.8%) Transketolase family (12.8%) Transketolase-like, C-terminal domain (12.8%)" YLAEKYPESYDAAVPEELVYSGGLK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 6.3.3.1 (100%) phosphoribosylformylglycinamidine cyclo-ligase (100%) "GO:0006189 (16.6%) GO:0046084 (16.6%) GO:0006164 (0.6%)" GO:0005829 (16.6%) "GO:0004637 (16.6%) GO:0004641 (16.6%) GO:0005524 (16.6%)" "'de novo' IMP biosynthetic process (16.6%) adenine biosynthetic process (16.6%) purine nucleotide biosynthetic process (0.6%)" cytosol (16.6%) "phosphoribosylamine-glycine ligase activity (16.6%) phosphoribosylformylglycinamidine cyclo-ligase activity (16.6%) ATP binding (16.6%)" "IPR004733 (20%) IPR010918 (20%) IPR016188 (20%)" "Phosphoribosylformylglycinamidine cyclo-ligase (20%) PurM-like, C-terminal domain (20%) PurM-like, N-terminal domain (20%)" IFLEEFGKPELNDLER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR002625 (25%) IPR018598 (25%) IPR036063 (25%)" "Smr domain (25%) Domain of unknown function DUF2027 (25%) Smr domain superfamily (25%)" FLPDINSHNAVVR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.7.7 (100%) DNA-directed DNA polymerase (100%) "GO:0006261 (16.7%) GO:0006302 (16.7%)" "GO:0003677 (16.7%) GO:0003887 (16.7%) GO:0008408 (16.7%)" "DNA-templated DNA replication (16.7%) double-strand break repair (16.7%)" "DNA binding (16.7%) DNA-directed DNA polymerase activity (16.7%) 3'-5' exonuclease activity (16.7%)" "IPR001098 (7.1%) IPR002298 (7.1%) IPR002421 (7.1%)" "DNA-directed DNA polymerase, family A, palm domain (7.1%) DNA polymerase A (7.1%) 5'-3' exonuclease (7.1%)" AEITPANADTVTR Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales 2.3.1.117 (100%) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (100%) "GO:0009089 (19.7%) GO:0019877 (19.7%) GO:0009085 (0.1%)" "GO:0005737 (19.3%) GO:0005829 (0.1%)" "GO:0008666 (21%) GO:0016779 (19.4%) GO:0016746 (0.6%)" "lysine biosynthetic process via diaminopimelate (19.7%) diaminopimelate biosynthetic process (19.7%) lysine biosynthetic process (0.1%)" "cytoplasm (19.3%) cytosol (0.1%)" "2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity (21%) nucleotidyltransferase activity (19.4%) acyltransferase activity (0.6%)" "IPR037133 (17.3%) IPR023180 (17.2%) IPR011004 (17%)" "Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily (17.3%) Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 (17.2%) Trimeric LpxA-like superfamily (17%)" TSAESILTTGPVVPVIVVK root "4.1.2.14 (51.3%) 4.1.3.42 (47.7%) 4.1.1.112 (0.5%)" "2-dehydro-3-deoxy-phosphogluconate aldolase (51.3%) (4S)-4-hydroxy-2-oxoglutarate aldolase (47.7%) oxaloacetate decarboxylase (0.5%)" GO:0009255 (0.3%) "GO:0005737 (30.7%) GO:0005829 (0.3%) GO:0016020 (0.3%)" "GO:0008675 (23.6%) GO:0008700 (23%) GO:0016829 (10.1%)" Entner-Doudoroff pathway through 6-phosphogluconate (0.3%) "cytoplasm (30.7%) cytosol (0.3%) membrane (0.3%)" "2-dehydro-3-deoxy-phosphogluconate aldolase activity (23.6%) (R,S)-4-hydroxy-2-oxoglutarate aldolase activity (23%) lyase activity (10.1%)" "IPR000887 (25.3%) IPR013785 (25.3%) IPR031337 (25.3%)" "KDPG/KHG aldolase (25.3%) Aldolase-type TIM barrel (25.3%) KDPG/KHG aldolase, active site 1 (25.3%)" FAPVGYISSNTPGK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 3.2.1.18 (100%) exo-alpha-sialidase (100%) "GO:0006689 (19.5%) GO:0009313 (19.5%)" "GO:0005737 (19.5%) GO:0016020 (19.5%) GO:0042597 (1.3%)" GO:0004308 (19.5%) "ganglioside catabolic process (19.5%) oligosaccharide catabolic process (19.5%)" "cytoplasm (19.5%) membrane (19.5%) periplasmic space (1.3%)" exo-alpha-sialidase activity (19.5%) "IPR029456 (21.1%) IPR008377 (19.7%) IPR011040 (19.7%)" "Sialidase, N-terminal (21.1%) Trypanosome sialidase (19.7%) Sialidase (19.7%)" NGESPMPVIAAASPTHCFDAAYDACK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "1.2.-.- (50%) 1.2.7.3 (50%)" "Acting on the aldehyde or oxo group of donors (50%) 2-oxoglutarate synthase (50%)" GO:0006979 (50%) "GO:0016903 (47.8%) GO:0047553 (2.2%)" response to oxidative stress (50%) "oxidoreductase activity, acting on the aldehyde or oxo group of donors (47.8%) 2-oxoglutarate synthase activity (2.2%)" "IPR002869 (14.5%) IPR002880 (14.5%) IPR019752 (14.5%)" "Pyruvate-flavodoxin oxidoreductase, central domain (14.5%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (14.5%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (14.5%)" ILPVVITYYADKSFDFVVK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) GO:0022625 (25%) "GO:0003735 (25%) GO:0070180 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "structural constituent of ribosome (25%) large ribosomal subunit rRNA binding (25%)" "IPR000911 (14.3%) IPR006519 (14.3%) IPR020783 (14.3%)" "Ribosomal protein uL11 (14.3%) Large ribosomal subunit protein uL11, bacteria (14.3%) Large ribosomal subunit protein uL11, C-terminal (14.3%)" VHSSCATGDIFGSMR Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia "3.5.4.25 (50.9%) 4.1.99.12 (49.1%)" "GTP cyclohydrolase II (50.9%) 3,4-dihydroxy-2-butanone-4-phosphate synthase (49.1%)" GO:0009231 (12.6%) GO:0005829 (12.6%) "GO:0003935 (12.6%) GO:0005525 (12.6%) GO:0008686 (12.5%)" riboflavin biosynthetic process (12.6%) cytosol (12.6%) "GTP cyclohydrolase II activity (12.6%) GTP binding (12.6%) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (12.5%)" "IPR000926 (16.7%) IPR017945 (16.7%) IPR032677 (16.7%)" "GTP cyclohydrolase II, RibA (16.7%) DHBP synthase RibB-like alpha/beta domain superfamily (16.7%) GTP cyclohydrolase II (16.7%)" GMIADMMPGTEEQLQK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 6.1.1.1 (100%) tyrosine--tRNA ligase (100%) GO:0006437 (16.9%) GO:0005829 (16.9%) "GO:0003723 (16.9%) GO:0004831 (16.9%) GO:0005524 (16.9%)" tyrosyl-tRNA aminoacylation (16.9%) cytosol (16.9%) "RNA binding (16.9%) tyrosine-tRNA ligase activity (16.9%) ATP binding (16.9%)" "IPR001412 (12.5%) IPR002305 (12.5%) IPR002307 (12.5%)" "Aminoacyl-tRNA synthetase, class I, conserved site (12.5%) Aminoacyl-tRNA synthetase, class Ic (12.5%) Tyrosine-tRNA ligase (12.5%)" EVAFCVIDQAK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola IPR027823 (100%) Domain of unknown function DUF4468 with TBP-like fold (100%) EIVDEKGADTEALGLSLFSFSSMK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0016740 (100%) transferase activity (100%) "IPR011990 (44%) IPR019734 (44%) IPR013105 (12%)" "Tetratricopeptide-like helical domain superfamily (44%) Tetratricopeptide repeat (44%) Tetratricopeptide repeat 2 (12%)" WNPAMAPYIFMER Bacteroidota Bacteria Pseudomonadati Bacteroidota GO:0006412 (33.3%) "GO:0022627 (33.3%) GO:0005840 (0.2%)" GO:0003735 (33.3%) translation (33.3%) "cytosolic small ribosomal subunit (33.3%) ribosome (0.2%)" structural constituent of ribosome (33.3%) "IPR001865 (25.2%) IPR005706 (25.2%) IPR023591 (25.2%)" "Small ribosomal subunit protein uS2 (25.2%) Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid (25.2%) Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily (25.2%)" GKTYFAPVDYISNNTPGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 3.2.1.18 (100%) exo-alpha-sialidase (100%) "GO:0006689 (20.2%) GO:0009313 (20.2%)" "GO:0016020 (20.2%) GO:0005737 (19.1%)" GO:0004308 (20.2%) "ganglioside catabolic process (20.2%) oligosaccharide catabolic process (20.2%)" "membrane (20.2%) cytoplasm (19.1%)" exo-alpha-sialidase activity (20.2%) "IPR011040 (20.4%) IPR026856 (20.4%) IPR029456 (20.4%)" "Sialidase (20.4%) Sialidase family (20.4%) Sialidase, N-terminal (20.4%)" TPNVSVVDLTVR root "1.2.1.12 (62%) 1.2.1.- (37.9%) 1.2.1.13 (0.1%)" "glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (62%) With NAD(+) or NADP(+) as acceptor (37.9%) glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) (0.1%)" "GO:0006006 (11.8%) GO:0006096 (8.7%) GO:0006915 (6.3%)" "GO:0005829 (8.3%) GO:0005856 (6.3%) GO:0005634 (6.3%)" "GO:0051287 (13.1%) GO:0004365 (12.9%) GO:0050661 (11.8%)" "glucose metabolic process (11.8%) glycolytic process (8.7%) apoptotic process (6.3%)" "cytosol (8.3%) cytoskeleton (6.3%) nucleus (6.3%)" "NAD binding (13.1%) glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (12.9%) NADP binding (11.8%)" "IPR020829 (18%) IPR020831 (18%) IPR036291 (16.5%)" "Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (18%) Glyceraldehyde/Erythrose phosphate dehydrogenase family (18%) NAD(P)-binding domain superfamily (16.5%)" VVKDLNGLTEEQFVER Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR008323 (100%) Uncharacterised conserved protein UCP033563 (100%) ELVELFFEEIRR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "GO:0006310 (14.3%) GO:0006417 (14.3%) GO:0006355 (14.2%)" "GO:0005829 (14.3%) GO:0032993 (0.1%) GO:1990177 (0%)" "GO:0003677 (14.3%) GO:0030527 (14.3%) GO:0000976 (0.1%)" "DNA recombination (14.3%) regulation of translation (14.3%) regulation of DNA-templated transcription (14.2%)" "cytosol (14.3%) protein-DNA complex (0.1%) IHF-DNA complex (0%)" "DNA binding (14.3%) structural constituent of chromatin (14.3%) transcription cis-regulatory region binding (0.1%)" "IPR010992 (25.1%) IPR000119 (25%) IPR005684 (25%)" "Integration host factor (IHF)-like DNA-binding domain superfamily (25.1%) Histone-like DNA-binding protein (25%) Integration host factor, alpha subunit (25%)" NHFETESGIGIQGLLPEGDVTIVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0005996 (33.3%) GO:0005737 (33.3%) GO:0016861 (33.3%) monosaccharide metabolic process (33.3%) cytoplasm (33.3%) intramolecular oxidoreductase activity, interconverting aldoses and ketoses (33.3%) IPR009015 (100%) L-fucose isomerase, N-terminal/central domain superfamily (100%) YKEAADYFDIAIKK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR011990 (50%) IPR019734 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) Tetratricopeptide repeat (50%)" LGLTQITYAEEILK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "GO:0009055 (93.3%) GO:0003677 (3.3%) GO:0016740 (3.3%)" "electron transfer activity (93.3%) DNA binding (3.3%) transferase activity (3.3%)" "IPR012255 (20.1%) IPR014729 (20.1%) IPR014730 (20.1%)" "Electron transfer flavoprotein, beta subunit (20.1%) Rossmann-like alpha/beta/alpha sandwich fold (20.1%) Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (20.1%)" GNQLAFGSFGIK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia GO:0006412 (20.3%) "GO:0022625 (20.3%) GO:0005840 (0.1%)" "GO:0003735 (20.3%) GO:0019843 (20.3%) GO:0000049 (18.7%)" translation (20.3%) "cytosolic large ribosomal subunit (20.3%) ribosome (0.1%)" "structural constituent of ribosome (20.3%) rRNA binding (20.3%) tRNA binding (18.7%)" "IPR000114 (20.2%) IPR016180 (20.2%) IPR036920 (20.2%)" "Large ribosomal subunit protein uL16, bacteria (20.2%) Large ribosomal subunit protein uL16 domain (20.2%) Large ribosomal subunit protein uL16 superfamily (20.2%)" PVDLTQAAENSLHAVVHIK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.4.21.107 (75%) 3.4.21.- (25%)" "peptidase Do (75%) Serine endopeptidases (25%)" GO:0006508 (50%) GO:0004252 (50%) proteolysis (50%) serine-type endopeptidase activity (50%) "IPR001478 (21.3%) IPR001940 (21.3%) IPR009003 (21.3%)" "PDZ domain (21.3%) Peptidase S1C (21.3%) Peptidase S1, PA clan (21.3%)" LLFVFDYMTER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "IPR012912 (50%) IPR024047 (50%)" "Plasmid pRiA4b, Orf3-like domain (50%) MM3350-like superfamily (50%)" IVDDQADVEETAIASTEDTGQKVEVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0015031 (16.7%) GO:0015891 (16.7%) GO:0055085 (16.7%)" "GO:0030288 (16.7%) GO:0098797 (16.7%)" GO:0031992 (16.7%) "protein transport (16.7%) siderophore transport (16.7%) transmembrane transport (16.7%)" "outer membrane-bounded periplasmic space (16.7%) plasma membrane protein complex (16.7%)" energy transducer activity (16.7%) "IPR003538 (25%) IPR006260 (25%) IPR037682 (25%)" "Gram-negative bacterial TonB protein (25%) TonB/TolA, C-terminal (25%) TonB, C-terminal (25%)" IWDAEQETPQSLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 5.1.3.3 (100%) aldose 1-epimerase (100%) "GO:0006006 (20%) GO:0033499 (20%)" GO:0005737 (20%) "GO:0004034 (20%) GO:0030246 (20%)" "glucose metabolic process (20%) galactose catabolic process via UDP-galactose, Leloir pathway (20%)" cytoplasm (20%) "aldose 1-epimerase activity (20%) carbohydrate binding (20%)" "IPR008183 (20%) IPR011013 (20%) IPR014718 (20%)" "Aldose 1-/Glucose-6-phosphate 1-epimerase (20%) Galactose mutarotase-like domain superfamily (20%) Glycoside hydrolase-type carbohydrate-binding (20%)" VGDVAEITIPQGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "GO:0006354 (20.2%) GO:0032784 (20.2%)" "GO:0003677 (20.2%) GO:0070063 (20.2%) GO:0003746 (19.4%)" "DNA-templated transcription elongation (20.2%) regulation of DNA-templated transcription elongation (20.2%)" "DNA binding (20.2%) RNA polymerase binding (20.2%) translation elongation factor activity (19.4%)" "IPR001437 (12.5%) IPR006359 (12.5%) IPR018151 (12.5%)" "Transcription elongation factor, GreA/GreB, C-terminal (12.5%) Transcription elongation factor GreA (12.5%) Transcription elongation factor, GreA/GreB, conserved site (12.5%)" STCTGVEMFRK root 3.6.5.3 (100%) protein-synthesizing GTPase (100%) "GO:0070125 (0.1%) GO:0006414 (0%) GO:0046677 (0%)" "GO:0005829 (17.8%) GO:0032045 (8.8%) GO:0005886 (0.9%)" "GO:0003746 (18.4%) GO:0005525 (18.2%) GO:0003924 (12.7%)" "mitochondrial translational elongation (0.1%) translational elongation (0%) response to antibiotic (0%)" "cytosol (17.8%) guanyl-nucleotide exchange factor complex (8.8%) plasma membrane (0.9%)" "translation elongation factor activity (18.4%) GTP binding (18.2%) GTPase activity (12.7%)" "IPR004161 (11%) IPR050055 (11%) IPR009000 (11%)" "Translation elongation factor EFTu-like, domain 2 (11%) Elongation factor Tu GTPase (11%) Translation protein, beta-barrel domain superfamily (11%)" STTDKAEATAMYPGIVK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (20%) "GO:0005829 (18.5%) GO:0015935 (18.5%) GO:0005840 (1.5%)" "GO:0003735 (20%) GO:0070181 (18.5%) GO:0019843 (1.5%)" translation (20%) "cytosol (18.5%) small ribosomal subunit (18.5%) ribosome (1.5%)" "structural constituent of ribosome (20%) small ribosomal subunit rRNA binding (18.5%) rRNA binding (1.5%)" "IPR002583 (50%) IPR036510 (50%)" "Small ribosomal subunit protein bS20 (50%) Small ribosomal subunit protein bS20 superfamily (50%)" GLHYQLAPYSQSK Bacteroidia Bacteria Pseudomonadati Bacteroidota Bacteroidia 5.1.3.13 (100%) dTDP-4-dehydrorhamnose 3,5-epimerase (100%) "GO:0000271 (25%) GO:0019305 (25%)" GO:0005829 (25%) GO:0008830 (25%) "polysaccharide biosynthetic process (25%) dTDP-rhamnose biosynthetic process (25%)" cytosol (25%) dTDP-4-dehydrorhamnose 3,5-epimerase activity (25%) "IPR000888 (33.3%) IPR011051 (33.3%) IPR014710 (33.3%)" "dTDP-4-dehydrorhamnose 3,5-epimerase-like (33.3%) RmlC-like cupin domain superfamily (33.3%) RmlC-like jelly roll fold (33.3%)" KEAEPDIYNAIKR Bacteria Bacteria 4.1.1.49 (100%) phosphoenolpyruvate carboxykinase (ATP) (100%) GO:0006094 (17.5%) GO:0005829 (17.5%) "GO:0004612 (17.5%) GO:0005524 (17.5%) GO:0046872 (16.8%)" gluconeogenesis (17.5%) cytosol (17.5%) "phosphoenolpyruvate carboxykinase (ATP) activity (17.5%) ATP binding (17.5%) metal ion binding (16.8%)" "IPR001272 (25.5%) IPR013035 (25.5%) IPR008210 (24.5%)" "Phosphoenolpyruvate carboxykinase, ATP-utilising (25.5%) Phosphoenolpyruvate carboxykinase, C-terminal (25.5%) Phosphoenolpyruvate carboxykinase, N-terminal (24.5%)" YGEEGDKLLFK root 6.1.1.21 (100%) histidine--tRNA ligase (100%) GO:0006427 (24.9%) GO:0005737 (25%) "GO:0004821 (25%) GO:0005524 (24.9%) GO:0004812 (0.1%)" histidyl-tRNA aminoacylation (24.9%) cytoplasm (25%) "histidine-tRNA ligase activity (25%) ATP binding (24.9%) aminoacyl-tRNA ligase activity (0.1%)" "IPR041715 (12.7%) IPR045864 (12.6%) IPR015807 (12.6%)" "Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain (12.7%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (12.6%) Histidine-tRNA ligase (12.6%)" VYETGLKDYAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016740 (100%) transferase activity (100%) "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" ADLAENSAVR root 6.1.1.15 (100%) proline--tRNA ligase (100%) GO:0006433 (20%) "GO:0005737 (20%) GO:0017101 (20%)" "GO:0004827 (20%) GO:0005524 (20%)" prolyl-tRNA aminoacylation (20%) "cytoplasm (20%) aminoacyl-tRNA synthetase multienzyme complex (20%)" "proline-tRNA ligase activity (20%) ATP binding (20%)" "IPR004499 (11.2%) IPR002314 (11.2%) IPR006195 (11.2%)" "Proline-tRNA ligase, class IIa, archaeal-type (11.2%) Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (11.2%) Aminoacyl-tRNA synthetase, class II (11.2%)" VAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK root "1.8.1.- (90.6%) 1.-.-.- (3.1%) 1.6.-.- (3.1%)" "With NAD(+) or NADP(+) as acceptor (90.6%) Oxidoreductases (3.1%) Acting on NADH or NADPH (3.1%)" "GO:0000302 (14.1%) GO:0045454 (0%) GO:0006979 (0%)" "GO:0005829 (14.3%) GO:0032991 (14.3%) GO:0009321 (0%)" "GO:0016668 (14.4%) GO:0050660 (14.4%) GO:0051287 (14.1%)" "response to reactive oxygen species (14.1%) cell redox homeostasis (0%) response to oxidative stress (0%)" "cytosol (14.3%) protein-containing complex (14.3%) alkyl hydroperoxide reductase complex (0%)" "oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (14.4%) flavin adenine dinucleotide binding (14.4%) NAD binding (14.1%)" "IPR008255 (11.3%) IPR023753 (11.3%) IPR050097 (11.3%)" "Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (11.3%) FAD/NAD(P)-binding domain (11.3%) Ferredoxin--NADP reductase type 2 (11.3%)" QYQPVNGNIVFK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0033104 (100%) type VI protein secretion system complex (100%) IPR041408 (100%) Hemolysin coregulated protein (Hcp) TssD (100%) VIPVIPPELRPLVPLDGGR root 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (16.7%) GO:0005975 (0%)" "GO:0000428 (16.7%) GO:0005829 (0.5%) GO:0031981 (0%)" "GO:0003677 (16.7%) GO:0003899 (16.7%) GO:0000287 (16%)" "DNA-templated transcription (16.7%) carbohydrate metabolic process (0%)" "DNA-directed RNA polymerase complex (16.7%) cytosol (0.5%) nuclear lumen (0%)" "DNA binding (16.7%) DNA-directed RNA polymerase activity (16.7%) magnesium ion binding (16%)" "IPR007080 (9.2%) IPR045867 (9.2%) IPR006592 (9.1%)" "RNA polymerase Rpb1, domain 1 (9.2%) DNA-directed RNA polymerase, subunit beta-prime (9.2%) RNA polymerase, N-terminal (9.1%)" VKEGFNSALAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides IPR024623 (100%) Uncharacterised protein family YtxH (100%) HAPGDYTPTVKPSSK Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0034605 (1.2%) GO:0005829 (98.8%) cellular response to heat (1.2%) cytosol (98.8%) "IPR007454 (50%) IPR027471 (50%)" "Uncharacterised protein family UPF0250, YbeD-like (50%) YbeD-like domain superfamily (50%)" SDDNLETIK root "2.7.4.3 (92.5%) 2.7.4.14 (5.7%) 7.1.2.2 (1.9%)" "adenylate kinase (92.5%) UMP/CMP kinase (5.7%) H(+)-transporting two-sector ATPase (1.9%)" "GO:0044209 (16.2%) GO:0046034 (1.9%) GO:0006172 (1.4%)" "GO:0005737 (18.1%) GO:0005634 (1.4%) GO:0005758 (1.4%)" "GO:0005524 (22.2%) GO:0004017 (20.4%) GO:0003688 (1.4%)" "AMP salvage (16.2%) ATP metabolic process (1.9%) ADP biosynthetic process (1.4%)" "cytoplasm (18.1%) nucleus (1.4%) mitochondrial intermembrane space (1.4%)" "ATP binding (22.2%) AMP kinase activity (20.4%) DNA replication origin binding (1.4%)" "IPR027417 (27.4%) IPR000850 (26.9%) IPR033690 (26.9%)" "P-loop containing nucleoside triphosphate hydrolase (27.4%) Adenylate kinase/UMP-CMP kinase (26.9%) Adenylate kinase, conserved site (26.9%)" GGAAGGGYAQVLPMEK Bacteria Bacteria 6.3.4.3 (100%) formate--tetrahydrofolate ligase (100%) GO:0035999 (33.2%) GO:0016020 (0.2%) "GO:0004329 (33.2%) GO:0005524 (33.2%) GO:0016874 (0.2%)" tetrahydrofolate interconversion (33.2%) membrane (0.2%) "formate-tetrahydrofolate ligase activity (33.2%) ATP binding (33.2%) ligase activity (0.2%)" "IPR000559 (33.5%) IPR027417 (33.5%) IPR020628 (33%)" "Formate-tetrahydrofolate ligase, FTHFS (33.5%) P-loop containing nucleoside triphosphate hydrolase (33.5%) Formate-tetrahydrofolate ligase, FTHFS, conserved site (33%)" HYSVEEWQAFINNSSADVLK root 1.7.1.7 (100%) GMP reductase (100%) "GO:0006163 (18.2%) GO:0006144 (0.2%) GO:0006164 (0.2%)" "GO:0005829 (20.4%) GO:1902560 (18.7%) GO:0005737 (0.2%)" "GO:0046872 (20.4%) GO:0003920 (20.2%) GO:0016491 (0.7%)" "purine nucleotide metabolic process (18.2%) purine nucleobase metabolic process (0.2%) purine nucleotide biosynthetic process (0.2%)" "cytosol (20.4%) GMP reductase complex (18.7%) cytoplasm (0.2%)" "metal ion binding (20.4%) GMP reductase activity (20.2%) oxidoreductase activity (0.7%)" "IPR001093 (20.6%) IPR013785 (20.6%) IPR050139 (20.6%)" "IMP dehydrogenase/GMP reductase (20.6%) Aldolase-type TIM barrel (20.6%) Guanosine monophosphate reductase (20.6%)" IAKEEMATEMER root 2.8.1.7 (100%) cysteine desulfurase (100%) "GO:0044571 (14.7%) GO:0016226 (0.3%) GO:0002143 (0.2%)" "GO:1990221 (14.7%) GO:0005829 (0.2%) GO:1990228 (0.2%)" "GO:0046872 (17%) GO:0031071 (16.8%) GO:0051537 (15.6%)" "[2Fe-2S] cluster assembly (14.7%) iron-sulfur cluster assembly (0.3%) tRNA wobble position uridine thiolation (0.2%)" "L-cysteine desulfurase complex (14.7%) cytosol (0.2%) sulfurtransferase complex (0.2%)" "metal ion binding (17%) cysteine desulfurase activity (16.8%) 2 iron, 2 sulfur cluster binding (15.6%)" "IPR000192 (14.9%) IPR015422 (14.9%) IPR015424 (14.9%)" "Aminotransferase class V domain (14.9%) Pyridoxal phosphate-dependent transferase, small domain (14.9%) Pyridoxal phosphate-dependent transferase (14.9%)" EHVTKPVVGYIAGVTAPK root 6.2.1.5 (100%) succinate--CoA ligase (ADP-forming) (100%) "GO:0006099 (20%) GO:0006086 (0.1%) GO:0006104 (0.1%)" "GO:0009361 (19.9%) GO:0005829 (0.1%) GO:0042709 (0.1%)" "GO:0004775 (20%) GO:0004776 (19.9%) GO:0000166 (19%)" "tricarboxylic acid cycle (20%) pyruvate decarboxylation to acetyl-CoA (0.1%) succinyl-CoA metabolic process (0.1%)" "succinate-CoA ligase complex (ADP-forming) (19.9%) cytosol (0.1%) succinate-CoA ligase complex (0.1%)" "succinate-CoA ligase (ADP-forming) activity (20%) succinate-CoA ligase (GDP-forming) activity (19.9%) nucleotide binding (19%)" "IPR005811 (14.6%) IPR016102 (14.6%) IPR017440 (14.4%)" "ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.6%) Succinyl-CoA synthetase-like (14.6%) ATP-citrate lyase/succinyl-CoA ligase, active site (14.4%)" NEDGTGVLVGLTK Bacteria Bacteria "2.3.3.16 (60%) 2.3.3.1 (40%)" "citrate synthase (unknown stereospecificity) (60%) citrate (Si)-synthase (40%)" "GO:0005975 (25.1%) GO:0006099 (25.1%)" GO:0005829 (24.8%) "GO:0036440 (21.2%) GO:0046912 (3.8%)" "carbohydrate metabolic process (25.1%) tricarboxylic acid cycle (25.1%)" cytosol (24.8%) "citrate synthase activity (21.2%) acyltransferase activity, acyl groups converted into alkyl on transfer (3.8%)" "IPR002020 (20.2%) IPR016142 (20.2%) IPR036969 (20.2%)" "Citrate synthase (20.2%) Citrate synthase-like, large alpha subdomain (20.2%) Citrate synthase superfamily (20.2%)" AAEVSGTASVPK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 2.3.1.- (100%) Transferring groups other than amino-acyl groups (100%) GO:0005737 (33.3%) "GO:0016407 (33.3%) GO:0031405 (33.3%)" cytoplasm (33.3%) "acetyltransferase activity (33.3%) lipoic acid binding (33.3%)" "IPR000089 (12.5%) IPR001078 (12.5%) IPR003016 (12.5%)" "Biotin/lipoyl attachment (12.5%) 2-oxoacid dehydrogenase acyltransferase, catalytic domain (12.5%) 2-oxo acid dehydrogenase, lipoyl-binding site (12.5%)" DMILVAAGNRLPYKQEDVACR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "6.3.4.14 (70%) 6.4.1.7 (30%)" "biotin carboxylase (70%) 2-oxoglutarate carboxylase (30%)" GO:2001295 (19%) "GO:0005524 (21.4%) GO:0046872 (21.4%) GO:0003989 (16.7%)" malonyl-CoA biosynthetic process (19%) "ATP binding (21.4%) metal ion binding (21.4%) acetyl-CoA carboxylase activity (16.7%)" "IPR004549 (12.5%) IPR005479 (12.5%) IPR005481 (12.5%)" "Acetyl-CoA carboxylase, biotin carboxylase (12.5%) Carbamoyl phosphate synthase, ATP-binding domain (12.5%) Biotin carboxylase-like, N-terminal domain (12.5%)" SSSVGSSSGSFGGGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis FHIPTYIGSGLSGQPNISSDMDGIFGGK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.2.1.177 (100%) alpha-D-xyloside xylohydrolase (100%) "GO:0000272 (31.3%) GO:0005975 (2%)" "GO:0030246 (32.7%) GO:0004553 (31.3%) GO:0061634 (2%)" "polysaccharide catabolic process (31.3%) carbohydrate metabolic process (2%)" "carbohydrate binding (32.7%) hydrolase activity, hydrolyzing O-glycosyl compounds (31.3%) alpha-D-xyloside xylohydrolase (2%)" "IPR000322 (6.3%) IPR048395 (6.3%) IPR017853 (6.2%)" "Glycoside hydrolase family 31, TIM barrel domain (6.3%) Glycosyl hydrolase family 31, C-terminal domain (6.3%) Glycoside hydrolase superfamily (6.2%)" GIPADKISAR Bacteria Bacteria "GO:0034220 (19.5%) GO:0006811 (5%) GO:0006974 (0.1%)" "GO:0009279 (24.5%) GO:0046930 (24.5%) GO:0016020 (0.1%)" "GO:0015288 (24.5%) GO:0016740 (0.9%) GO:0015075 (0.1%)" "monoatomic ion transmembrane transport (19.5%) monoatomic ion transport (5%) DNA damage response (0.1%)" "cell outer membrane (24.5%) pore complex (24.5%) membrane (0.1%)" "porin activity (24.5%) transferase activity (0.9%) monoatomic ion transmembrane transporter activity (0.1%)" "IPR002368 (12.7%) IPR006664 (12.7%) IPR006665 (12.7%)" "Outer membrane protein, OmpA (12.7%) Outer membrane protein, bacterial (12.7%) OmpA-like domain (12.7%)" LDSHPGELIPEELR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" VGDVKIELLEPTSPESTIAK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.1.99.1 (96.4%) 5.1.99.- (3.6%)" "methylmalonyl-CoA epimerase (96.4%) Acting on other compounds (3.6%)" GO:0046491 (46.8%) "GO:0004493 (46.8%) GO:0016829 (2.6%) GO:0051213 (2.6%)" L-methylmalonyl-CoA metabolic process (46.8%) "methylmalonyl-CoA epimerase activity (46.8%) lyase activity (2.6%) dioxygenase activity (2.6%)" "IPR017515 (25%) IPR029068 (25%) IPR037523 (25%)" "Methylmalonyl-CoA epimerase (25%) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (25%) Vicinal oxygen chelate (VOC), core domain (25%)" GKPAQEFFDVKQPDIYAIVPDDFHGVTPK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola 7.2.1.1 (100%) NADH:ubiquinone reductase (Na(+)-transporting) (100%) GO:0006814 (50%) GO:0016655 (50%) sodium ion transport (50%) oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (50%) "IPR008703 (25%) IPR022615 (25%) IPR056147 (25%)" "Na(+)-translocating NADH-quinone reductase subunit A (25%) Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain (25%) NqrA, N-terminal barrel-sandwich hybrid domain (25%)" VIVEGINLVKK root "GO:0006412 (17.6%) GO:0000027 (0%) GO:0002181 (0%)" "GO:0005840 (17.9%) GO:1990904 (17.6%) GO:0005829 (11.5%)" "GO:0003735 (17.6%) GO:0019843 (17.4%) GO:0003723 (0.2%)" "translation (17.6%) ribosomal large subunit assembly (0%) cytoplasmic translation (0%)" "ribosome (17.9%) ribonucleoprotein complex (17.6%) cytosol (11.5%)" "structural constituent of ribosome (17.6%) rRNA binding (17.4%) RNA binding (0.2%)" "IPR003256 (14.6%) IPR041988 (14.6%) IPR008991 (14.5%)" "Large ribosomal subunit protein uL24 (14.6%) Large ribosomal subunit protein uL24, KOW domain (14.6%) Translation protein SH3-like domain superfamily (14.5%)" MSGECAPNVSVSVSTSHTTISGGGSR Homo sapiens Eukaryota Metazoa Chordata Craniata Sarcopterygii Mammalia Euarchontoglires Primates Haplorrhini Simiiformes Hominoidea Hominidae Homininae Homo Homo sapiens "GO:0001867 (2.2%) GO:0006979 (2.2%) GO:0018149 (2.2%)" "GO:0005829 (15.6%) GO:0045095 (15.6%) GO:0005886 (13.3%)" "GO:0030246 (2.2%) GO:0030280 (2.2%) GO:0038023 (2.2%)" "complement activation, lectin pathway (2.2%) response to oxidative stress (2.2%) peptide cross-linking (2.2%)" "cytosol (15.6%) keratin filament (15.6%) plasma membrane (13.3%)" "carbohydrate binding (2.2%) structural constituent of skin epidermis (2.2%) signaling receptor activity (2.2%)" "IPR003054 (20%) IPR018039 (20%) IPR032444 (20%)" "Keratin, type II (20%) Intermediate filament protein, conserved site (20%) Keratin type II head (20%)" IQQIPFDDKENCIYSPDVVSFAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 3.4.-.- (100%) Acting on peptide bonds (peptidases) (100%) GO:0006508 (33.3%) "GO:0016805 (33.3%) GO:0070004 (33.3%)" proteolysis (33.3%) "dipeptidase activity (33.3%) cysteine-type exopeptidase activity (33.3%)" IPR005322 (100%) Peptidase C69 (100%) EGVITVEDGTGLQDELDVVEGMQFDR root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (16.6%) GO:1990220 (0.1%) GO:0005829 (0%)" "GO:0140662 (17%) GO:0005524 (16.9%) GO:0016853 (16.8%)" "protein refolding (17%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (16.6%) GroEL-GroES complex (0.1%) cytosol (0%)" "ATP-dependent protein folding chaperone (17%) ATP binding (16.9%) isomerase activity (16.8%)" "IPR001844 (16.9%) IPR027409 (16.8%) IPR027413 (16.8%)" "Chaperonin Cpn60/GroEL (16.9%) GroEL-like apical domain superfamily (16.8%) GroEL-like equatorial domain superfamily (16.8%)" QQCQGEIQLPLSDCGVVALDYRGEK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.3.5.3 (100%) phosphoribosylformylglycinamidine synthase (100%) "GO:0006189 (19.4%) GO:0006164 (0.9%)" GO:0005737 (20.1%) "GO:0004642 (20.1%) GO:0046872 (19.6%) GO:0005524 (19.5%)" "'de novo' IMP biosynthetic process (19.4%) purine nucleotide biosynthetic process (0.9%)" cytoplasm (20.1%) "phosphoribosylformylglycinamidine synthase activity (20.1%) metal ion binding (19.6%) ATP binding (19.5%)" "IPR010918 (11.3%) IPR036676 (11.3%) IPR036921 (11.3%)" "PurM-like, C-terminal domain (11.3%) PurM-like, C-terminal domain superfamily (11.3%) PurM-like, N-terminal domain superfamily (11.3%)" LIVIDGVFSMEGDVAKLPEIVALAK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.3.1.50 (100%) serine C-palmitoyltransferase (100%) GO:0030148 (23.1%) GO:0016020 (23.1%) "GO:0030170 (25.6%) GO:0008483 (12.8%) GO:0016740 (10.3%)" sphingolipid biosynthetic process (23.1%) membrane (23.1%) "pyridoxal phosphate binding (25.6%) transaminase activity (12.8%) transferase activity (10.3%)" "IPR001917 (16.7%) IPR004839 (16.7%) IPR015421 (16.7%)" "Aminotransferase, class-II, pyridoxal-phosphate binding site (16.7%) Aminotransferase, class I/classII, large domain (16.7%) Pyridoxal phosphate-dependent transferase, major domain (16.7%)" VGLSPTPCLER root "GO:0006524 (19.8%) GO:0043201 (19.8%) GO:0006355 (19.7%)" "GO:0005829 (20%) GO:0032993 (0%) GO:0005886 (0%)" "GO:0043565 (20%) GO:0000976 (0%) GO:0001216 (0%)" "alanine catabolic process (19.8%) response to L-leucine (19.8%) regulation of DNA-templated transcription (19.7%)" "cytosol (20%) protein-DNA complex (0%) plasma membrane (0%)" "sequence-specific DNA binding (20%) transcription cis-regulatory region binding (0%) DNA-binding transcription activator activity (0%)" "IPR000485 (12.7%) IPR036388 (12.7%) IPR036390 (12.7%)" "AsnC-type HTH domain (12.7%) Winged helix-like DNA-binding domain superfamily (12.7%) Winged helix DNA-binding domain superfamily (12.7%)" NIVLNIFPSLDTGVCATSVRK Bacteria Bacteria 1.11.1.24 (100%) thioredoxin-dependent peroxiredoxin (100%) GO:0008379 (100%) thioredoxin peroxidase activity (100%) "IPR002065 (16.7%) IPR013740 (16.7%) IPR013766 (16.7%)" "Thiol peroxidase Tpx (16.7%) Redoxin (16.7%) Thioredoxin domain (16.7%)" FDATAVINGHEIVQNFSLDQYK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006979 (16.7%) GO:0033554 (16.7%) GO:0042744 (16.7%)" GO:0005829 (16.7%) GO:0008379 (16.7%) "response to oxidative stress (16.7%) cellular response to stress (16.7%) hydrogen peroxide catabolic process (16.7%)" cytosol (16.7%) thioredoxin peroxidase activity (16.7%) "IPR000866 (16.7%) IPR013766 (16.7%) IPR019479 (16.7%)" "Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant (16.7%) Thioredoxin domain (16.7%) Peroxiredoxin, C-terminal (16.7%)" SMADKLAAEIMDAFNEQGGAFK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides GO:0006412 (21.4%) "GO:0015935 (21.4%) GO:0005840 (0.7%) GO:1990904 (0.7%)" "GO:0003735 (21.4%) GO:0019843 (21.4%) GO:0000049 (13.1%)" translation (21.4%) "small ribosomal subunit (21.4%) ribosome (0.7%) ribonucleoprotein complex (0.7%)" "structural constituent of ribosome (21.4%) rRNA binding (21.4%) tRNA binding (13.1%)" "IPR023798 (25.4%) IPR036823 (25.4%) IPR000235 (24.6%)" "Small ribosomal subunit protein uS7 domain (25.4%) Small ribosomal subunit protein uS7 domain superfamily (25.4%) Small ribosomal subunit protein uS7 (24.6%)" KGMACGSMGPTTAGR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 4.2.1.2 (100%) fumarate hydratase (100%) GO:0006099 (20%) "GO:0004333 (20%) GO:0042803 (20%) GO:0046872 (20%)" tricarboxylic acid cycle (20%) "fumarate hydratase activity (20%) protein homodimerization activity (20%) metal ion binding (20%)" "IPR004646 (16.7%) IPR004647 (16.7%) IPR011167 (16.7%)" "Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain (16.7%) Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain (16.7%) Iron-dependent fumarate hydratase (16.7%)" IGVENYLPLQPVVR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "GO:0006354 (50%) GO:0031564 (50%)" "DNA-templated transcription elongation (50%) transcription antitermination (50%)" "IPR006645 (33.3%) IPR036735 (33.3%) IPR043425 (33.3%)" "NusG-like, N-terminal (33.3%) NusG, N-terminal domain superfamily (33.3%) NusG-like (33.3%)" EAIWAEVDKIEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 7.4.2.8 (100%) protein-secreting ATPase (100%) "GO:0006605 (11.2%) GO:0017038 (11.2%) GO:0043952 (11.2%)" "GO:0005829 (11.2%) GO:0005886 (11.2%) GO:0031522 (11.2%)" "GO:0005524 (11.2%) GO:0046872 (10%) GO:0008564 (0.4%)" "protein targeting (11.2%) protein import (11.2%) protein transport by the Sec complex (11.2%)" "cytosol (11.2%) plasma membrane (11.2%) cell envelope Sec protein transport complex (11.2%)" "ATP binding (11.2%) metal ion binding (10%) protein-exporting ATPase activity (0.4%)" "IPR000185 (8.2%) IPR011115 (8.2%) IPR014018 (8.2%)" "Protein translocase subunit SecA (8.2%) SecA DEAD-like, N-terminal (8.2%) SecA motor DEAD (8.2%)" TVQIIPHITDEIKR root 6.3.4.2 (100%) CTP synthase (glutamine hydrolyzing) (100%) "GO:0019856 (12.1%) GO:0044210 (11.9%) GO:0006241 (0.2%)" "GO:0005829 (10.8%) GO:0097268 (10.8%)" "GO:0003883 (12.1%) GO:0042802 (12.1%) GO:0005524 (11.9%)" "pyrimidine nucleobase biosynthetic process (12.1%) 'de novo' CTP biosynthetic process (11.9%) CTP biosynthetic process (0.2%)" "cytosol (10.8%) cytoophidium (10.8%)" "CTP synthase activity (12.1%) identical protein binding (12.1%) ATP binding (11.9%)" "IPR004468 (16.8%) IPR017456 (16.8%) IPR027417 (16.8%)" "CTP synthase (16.8%) CTP synthase, N-terminal (16.8%) P-loop containing nucleoside triphosphate hydrolase (16.8%)" FYGLGADGTVGANKNSVK root "1.2.7.- (53.8%) 1.2.7.1 (43.9%) 1.2.1.51 (2.3%)" "With an iron-sulfur protein as acceptor (53.8%) pyruvate synthase (43.9%) pyruvate dehydrogenase (NADP(+)) (2.3%)" "GO:0006979 (14.7%) GO:0022900 (14.6%) GO:0044281 (12.2%)" "GO:0051539 (14.7%) GO:0005506 (14.6%) GO:0030976 (14.2%)" "response to oxidative stress (14.7%) electron transport chain (14.6%) small molecule metabolic process (12.2%)" "4 iron, 4 sulfur cluster binding (14.7%) iron ion binding (14.6%) thiamine pyrophosphate binding (14.2%)" "IPR002869 (7.8%) IPR009014 (7.8%) IPR019752 (7.8%)" "Pyruvate-flavodoxin oxidoreductase, central domain (7.8%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (7.8%) Pyruvate/ketoisovalerate oxidoreductase, catalytic domain (7.8%)" TNLNYQQTHFVMSAPDIR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0000917 (24.9%) GO:0005829 (25.1%) "GO:0005525 (25.1%) GO:0046872 (24.9%)" division septum assembly (24.9%) cytosol (25.1%) "GTP binding (25.1%) metal ion binding (24.9%)" "IPR006073 (25.1%) IPR027417 (25.1%) IPR019987 (24.9%)" "GTP binding domain (25.1%) P-loop containing nucleoside triphosphate hydrolase (25.1%) GTP-binding protein, ribosome biogenesis, YsxC (24.9%)" IAGEMLPCVFHVSAR root "1.2.1.51 (80%) 1.2.7.1 (20%)" "pyruvate dehydrogenase (NADP(+)) (80%) pyruvate synthase (20%)" "GO:0006979 (14.6%) GO:0022900 (14.6%) GO:0044281 (4.2%)" "GO:0005506 (14.6%) GO:0016903 (14.6%) GO:0030976 (14.6%)" "response to oxidative stress (14.6%) electron transport chain (14.6%) small molecule metabolic process (4.2%)" "iron ion binding (14.6%) oxidoreductase activity, acting on the aldehyde or oxo group of donors (14.6%) thiamine pyrophosphate binding (14.6%)" "IPR002869 (5.4%) IPR002880 (5.4%) IPR009014 (5.4%)" "Pyruvate-flavodoxin oxidoreductase, central domain (5.4%) Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain (5.4%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (5.4%)" ASKDFHIVAETGIHAR Streptococcaceae Bacteria Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae 2.7.11.- (100%) Protein-serine/threonine kinases (100%) GO:0009401 (41.3%) GO:0005737 (41.3%) GO:0016740 (17.4%) phosphoenolpyruvate-dependent sugar phosphotransferase system (41.3%) cytoplasm (41.3%) transferase activity (17.4%) "IPR000032 (20.1%) IPR001020 (20%) IPR035895 (20%)" "Phosphocarrier protein HPr-like (20.1%) Phosphotransferase system, HPr histidine phosphorylation site (20%) HPr-like superfamily (20%)" LDNELEVEDLKELVKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25.2%) GO:0016301 (25.2%) GO:0050242 (25.2%)" "ATP binding (25.2%) kinase activity (25.2%) pyruvate, phosphate dikinase activity (25.2%)" "IPR002192 (10.2%) IPR010121 (10.2%) IPR013815 (10.2%)" "Pyruvate phosphate dikinase, AMP/ATP-binding (10.2%) Pyruvate, phosphate dikinase (10.2%) ATP-grasp fold, subdomain 1 (10.2%)" VIFNPNTGGIVKIDKD Bacteria Bacteria IPR032265 (100%) Protein of unknown function DUF4831 (100%) GQVPALLLDDGTLLTEGVAIMQYLADSVPDR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae 2.5.1.18 (100%) glutathione transferase (100%) GO:0042542 (0.2%) GO:0005737 (13.3%) "GO:0004364 (50.6%) GO:0016740 (35.7%) GO:0016853 (0.2%)" response to hydrogen peroxide (0.2%) cytoplasm (13.3%) "glutathione transferase activity (50.6%) transferase activity (35.7%) isomerase activity (0.2%)" "IPR004045 (17.5%) IPR036249 (17.5%) IPR036282 (17.2%)" "Glutathione S-transferase, N-terminal (17.5%) Thioredoxin-like superfamily (17.5%) Glutathione S-transferase, C-terminal domain superfamily (17.2%)" FLDEMEIPFEMHALSAHR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides "5.4.99.18 (77.8%) 4.1.1.21 (22.2%)" "5-(carboxyamino)imidazole ribonucleotide mutase (77.8%) phosphoribosylaminoimidazole carboxylase (22.2%)" GO:0006189 (27.8%) GO:0016020 (27.8%) "GO:0034023 (27.8%) GO:0016829 (16.7%)" 'de novo' IMP biosynthetic process (27.8%) membrane (27.8%) "5-(carboxyamino)imidazole ribonucleotide mutase activity (27.8%) lyase activity (16.7%)" "IPR000031 (33.3%) IPR024694 (33.3%) IPR033747 (33.3%)" "PurE domain (33.3%) PurE, prokaryotic type (33.3%) Class I PurE (33.3%)" TGNEAQISIDSNSQPDYR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.86 (93.5%) 1.1.1.- (6.5%)" "ketol-acid reductoisomerase (NADP(+)) (93.5%) With NAD(+) or NADP(+) as acceptor (6.5%)" "GO:0009097 (21.3%) GO:0009099 (21.3%)" "GO:0004455 (21.3%) GO:0046872 (20.6%) GO:0016853 (15.4%)" "isoleucine biosynthetic process (21.3%) L-valine biosynthetic process (21.3%)" "ketol-acid reductoisomerase activity (21.3%) metal ion binding (20.6%) isomerase activity (15.4%)" "IPR000506 (16.9%) IPR008927 (16.9%) IPR013023 (16.9%)" "Ketol-acid reductoisomerase, C-terminal (16.9%) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily (16.9%) Ketol-acid reductoisomerase (16.9%)" YCAYTPCFR Bacteria Bacteria 6.1.1.11 (100%) serine--tRNA ligase (100%) "GO:0006434 (17.4%) GO:0016260 (16.6%)" GO:0005737 (17.4%) "GO:0004828 (17.4%) GO:0005524 (17.4%) GO:0016740 (6.8%)" "seryl-tRNA aminoacylation (17.4%) selenocysteine biosynthetic process (16.6%)" cytoplasm (17.4%) "serine-tRNA ligase activity (17.4%) ATP binding (17.4%) transferase activity (6.8%)" "IPR002314 (12.7%) IPR002317 (12.7%) IPR006195 (12.7%)" "Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) (12.7%) Serine-tRNA ligase, type1 (12.7%) Aminoacyl-tRNA synthetase, class II (12.7%)" LRELSFGYTFR Bacteroidota Bacteria Pseudomonadati Bacteroidota "GO:0006826 (20.5%) GO:0044718 (4.5%)" "GO:0009279 (47.7%) GO:0016020 (2.3%)" GO:0015344 (25%) "iron ion transport (20.5%) siderophore transmembrane transport (4.5%)" "cell outer membrane (47.7%) membrane (2.3%)" siderophore uptake transmembrane transporter activity (25%) "IPR036942 (14.3%) IPR039426 (14.3%) IPR008969 (13%)" "TonB-dependent receptor-like, beta-barrel domain superfamily (14.3%) TonB-dependent receptor-like (14.3%) Carboxypeptidase-like, regulatory domain superfamily (13%)" KSYAFYSIVIADSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" QVIGQVAADLR root "GO:0002181 (24.7%) GO:0006412 (0.1%) GO:0042254 (0.1%)" "GO:0022625 (24.7%) GO:0005840 (0.6%) GO:0015935 (0.1%)" "GO:0003735 (24.8%) GO:0019843 (24.7%) GO:0008097 (0%)" "cytoplasmic translation (24.7%) translation (0.1%) ribosome biogenesis (0.1%)" "cytosolic large ribosomal subunit (24.7%) ribosome (0.6%) small ribosomal subunit (0.1%)" "structural constituent of ribosome (24.8%) rRNA binding (24.7%) 5S rRNA binding (0%)" "IPR020040 (19.9%) IPR036789 (19.9%) IPR000702 (19.8%)" "Large ribosomal subunit protein uL6, alpha-beta domain (19.9%) Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily (19.9%) Large ribosomal subunit protein uL6-like (19.8%)" IVLLQGESHKK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0034599 (33.3%) GO:0005737 (33.3%) GO:0016491 (33.3%) cellular response to oxidative stress (33.3%) cytoplasm (33.3%) oxidoreductase activity (33.3%) "IPR000415 (33.3%) IPR029479 (33.3%) IPR033877 (33.3%)" "Nitroreductase-like (33.3%) Nitroreductase (33.3%) Nitroreductase Frm2/Hbn1-like (33.3%)" YSPNAILVVISNPMDTMTYLSLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.1.1.37 (100%) malate dehydrogenase (100%) "GO:0006089 (24.9%) GO:0006099 (24.2%) GO:0019752 (0.4%)" GO:0005737 (0.4%) "GO:0004459 (24.9%) GO:0030060 (24.9%) GO:0016491 (0.4%)" "lactate metabolic process (24.9%) tricarboxylic acid cycle (24.2%) carboxylic acid metabolic process (0.4%)" cytoplasm (0.4%) "L-lactate dehydrogenase (NAD+) activity (24.9%) L-malate dehydrogenase (NAD+) activity (24.9%) oxidoreductase activity (0.4%)" "IPR001236 (16.8%) IPR011275 (16.8%) IPR022383 (16.8%)" "Lactate/malate dehydrogenase, N-terminal (16.8%) Malate dehydrogenase, type 3 (16.8%) Lactate/malate dehydrogenase, C-terminal (16.8%)" MKPTLFILAAGMGSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 1.4.1.13 (100%) glutamate synthase (NADPH) (100%) "GO:0016740 (95.6%) GO:0016779 (2.9%) GO:0004355 (1.5%)" "transferase activity (95.6%) nucleotidyltransferase activity (2.9%) glutamate synthase (NADPH) activity (1.5%)" "IPR029044 (98.6%) IPR005835 (1.4%)" "Nucleotide-diphospho-sugar transferases (98.6%) Nucleotidyl transferase domain (1.4%)" KEGYEQIAGVFMETAEQEKEHAKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0006979 (1.6%) GO:0005737 (1.6%) "GO:0005506 (48.4%) GO:0016491 (40.6%) GO:0016692 (6.3%)" response to oxidative stress (1.6%) cytoplasm (1.6%) "iron ion binding (48.4%) oxidoreductase activity (40.6%) NADH peroxidase activity (6.3%)" "IPR003251 (14.3%) IPR009040 (14.3%) IPR009078 (14.3%)" "Rubrerythrin, diiron-binding domain (14.3%) Ferritin-like diiron domain (14.3%) Ferritin-like superfamily (14.3%)" FTEGAFKDWGYQLAR root "1.1.1.42 (99.8%) 1.1.1.- (0.1%) 1.1.1.41 (0.1%)" "isocitrate dehydrogenase (NADP(+)) (99.8%) With NAD(+) or NADP(+) as acceptor (0.1%) isocitrate dehydrogenase (NAD(+)) (0.1%)" "GO:0006099 (21.3%) GO:0006097 (18%) GO:0006979 (0%)" "GO:0005737 (0%) GO:0005829 (0%)" "GO:0004450 (21.3%) GO:0000287 (17.9%) GO:0051287 (17.9%)" "tricarboxylic acid cycle (21.3%) glyoxylate cycle (18%) response to oxidative stress (0%)" "cytoplasm (0%) cytosol (0%)" "isocitrate dehydrogenase (NADP+) activity (21.3%) magnesium ion binding (17.9%) NAD binding (17.9%)" "IPR004439 (35.2%) IPR024084 (35.2%) IPR019818 (29.6%)" "Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic (35.2%) Isopropylmalate dehydrogenase-like domain (35.2%) Isocitrate/isopropylmalate dehydrogenase, conserved site (29.6%)" CGEWHVYHTVCGACGYYR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.3%) "GO:0015934 (32.9%) GO:0022625 (0.5%)" GO:0003735 (33.3%) translation (33.3%) "large ribosomal subunit (32.9%) cytosolic large ribosomal subunit (0.5%)" structural constituent of ribosome (33.3%) "IPR002677 (33.3%) IPR011332 (33.3%) IPR044957 (33.3%)" "Large ribosomal subunit protein bL32 (33.3%) Zinc-binding ribosomal protein (33.3%) Large ribosomal subunit protein bL32, bacteria (33.3%)" NTAAPATGAIANAK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) EMSQENFDKLADVMGV Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "3.5.1.108 (50%) 4.2.1.59 (50%)" "UDP-3-O-acyl-N-acetylglucosamine deacetylase (50%) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (50%)" "GO:0006633 (14.3%) GO:0009245 (14.3%)" "GO:0005737 (14.3%) GO:0016020 (14.3%)" "GO:0016836 (14.3%) GO:0046872 (14.3%) GO:0103117 (14.3%)" "fatty acid biosynthetic process (14.3%) lipid A biosynthetic process (14.3%)" "cytoplasm (14.3%) membrane (14.3%)" "hydro-lyase activity (14.3%) metal ion binding (14.3%) UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (14.3%)" "IPR004463 (14.3%) IPR010084 (14.3%) IPR011334 (14.3%)" "UDP-3-O-acyl N-acetylglucosamine deacetylase (14.3%) Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (14.3%) UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (14.3%)" THYKGHTNATVELADCK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 5.3.1.8 (100%) mannose-6-phosphate isomerase (100%) GO:0005975 (33.3%) "GO:0004476 (33.3%) GO:0008270 (33.3%)" carbohydrate metabolic process (33.3%) "mannose-6-phosphate isomerase activity (33.3%) zinc ion binding (33.3%)" "IPR011051 (17.2%) IPR014628 (17.2%) IPR014710 (17.2%)" "RmlC-like cupin domain superfamily (17.2%) Mannose-6-phosphate isomerase, Firmicutes type, short form (17.2%) RmlC-like jelly roll fold (17.2%)" ELMGEGGGLCIFHGTKDTLICGCYGVNPWLLSGR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.18 (100%) inositol 2-dehydrogenase (100%) "GO:0000166 (88.9%) GO:0050112 (11.1%)" "nucleotide binding (88.9%) inositol 2-dehydrogenase (NAD+) activity (11.1%)" "IPR000683 (16.7%) IPR006311 (16.7%) IPR019546 (16.7%)" "Gfo/Idh/MocA-like oxidoreductase, N-terminal (16.7%) Twin-arginine translocation pathway, signal sequence (16.7%) Twin-arginine translocation pathway, signal sequence, bacterial/archaeal (16.7%)" FNSLTKEQQQDVITR root 2.3.1.54 (100%) formate C-acetyltransferase (100%) "GO:0006006 (30.4%) GO:0005975 (0.1%) GO:0044814 (0%)" "GO:0005829 (32.1%) GO:0005886 (0%) GO:0016020 (0%)" "GO:0008861 (32.1%) GO:0016829 (4.7%) GO:0016746 (0.4%)" "glucose metabolic process (30.4%) carbohydrate metabolic process (0.1%) pyruvate fermentation via PFL (0%)" "cytosol (32.1%) plasma membrane (0%) membrane (0%)" "formate C-acetyltransferase activity (32.1%) lyase activity (4.7%) acyltransferase activity (0.4%)" "IPR001150 (20.3%) IPR050244 (20.3%) IPR019777 (20.2%)" "Glycine radical domain (20.3%) Autonomous Glycyl Radical Cofactor (20.3%) Formate C-acetyltransferase glycine radical, conserved site (20.2%)" ELDQIFRECDIVSLHCPLTESTR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "1.1.1.29 (75%) 1.1.1.290 (25%)" "glycerate dehydrogenase (75%) 4-phosphoerythronate dehydrogenase (25%)" "GO:0051287 (50%) GO:0016616 (38.9%) GO:0008465 (8.3%)" "NAD binding (50%) oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (38.9%) hydroxypyruvate reductase (NADH) activity (8.3%)" "IPR006139 (20%) IPR006140 (20%) IPR029753 (20%)" "D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain (20%) D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site (20%)" RSQNWLPSIFNDFFDNELMAK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR002068 (33.3%) IPR008978 (33.3%) IPR031107 (33.3%)" "Alpha crystallin/Hsp20 domain (33.3%) HSP20-like chaperone (33.3%) Small heat shock protein (33.3%)" DKGVNLVLAVDAK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.7%) GO:0006096 (16.7%)" GO:0005829 (16.7%) "GO:0004618 (16.7%) GO:0005524 (16.7%) GO:0043531 (16.7%)" "gluconeogenesis (16.7%) glycolytic process (16.7%)" cytosol (16.7%) "phosphoglycerate kinase activity (16.7%) ATP binding (16.7%) ADP binding (16.7%)" "IPR001576 (33.3%) IPR015824 (33.3%) IPR036043 (33.3%)" "Phosphoglycerate kinase (33.3%) Phosphoglycerate kinase, N-terminal (33.3%) Phosphoglycerate kinase superfamily (33.3%)" DYDSHKENPNEVSSPDKK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.1.1.205 (100%) IMP dehydrogenase (100%) "GO:0006177 (25%) GO:0006183 (25%)" "GO:0003938 (25%) GO:0046872 (25%)" "GMP biosynthetic process (25%) GTP biosynthetic process (25%)" "IMP dehydrogenase activity (25%) metal ion binding (25%)" "IPR000644 (16.7%) IPR001093 (16.7%) IPR005990 (16.7%)" "CBS domain (16.7%) IMP dehydrogenase/GMP reductase (16.7%) Inosine-5'-monophosphate dehydrogenase (16.7%)" FNSNSEDRPQR Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis 5.4.99.- (100%) Transferring other groups (100%) GO:0000455 (33.3%) "GO:0003723 (33.3%) GO:0120159 (33.3%)" enzyme-directed rRNA pseudouridine synthesis (33.3%) "RNA binding (33.3%) rRNA pseudouridine synthase activity (33.3%)" "IPR000748 (11.1%) IPR002942 (11.1%) IPR006145 (11.1%)" "Pseudouridine synthase, RsuA/RluB/E/F (11.1%) RNA-binding S4 domain (11.1%) Pseudouridine synthase, RsuA/RluA-like (11.1%)" ITINYTVEGRFGEYSK IFPIESPAIDSITVNKVGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0006412 (33.3%) GO:0022625 (33.3%) GO:0003735 (33.3%) translation (33.3%) cytosolic large ribosomal subunit (33.3%) structural constituent of ribosome (33.3%) "IPR001857 (25%) IPR008991 (25%) IPR018257 (25%)" "Large ribosomal subunit protein bL19 (25%) Translation protein SH3-like domain superfamily (25%) Large ribosomal subunit protein bL19, conserved site (25%)" MFGYLMEK root 2.7.2.3 (100%) phosphoglycerate kinase (100%) "GO:0006094 (16.5%) GO:0006096 (16.5%)" "GO:0005829 (16.5%) GO:0016020 (1.2%)" "GO:0004618 (16.5%) GO:0005524 (16.5%) GO:0043531 (16.5%)" "gluconeogenesis (16.5%) glycolytic process (16.5%)" "cytosol (16.5%) membrane (1.2%)" "phosphoglycerate kinase activity (16.5%) ATP binding (16.5%) ADP binding (16.5%)" "IPR001576 (32.2%) IPR015824 (32.2%) IPR036043 (32.2%)" "Phosphoglycerate kinase (32.2%) Phosphoglycerate kinase, N-terminal (32.2%) Phosphoglycerate kinase superfamily (32.2%)" GNPITAHYTFTDK Clostridia Bacteria Bacillati Bacillota Clostridia 3.5.1.11 (100%) penicillin amidase (100%) "GO:0016787 (87%) GO:0008953 (13%)" "hydrolase activity (87%) penicillin amidase activity (13%)" "IPR029055 (33.3%) IPR029132 (33.3%) IPR052193 (33.3%)" "Nucleophile aminohydrolases, N-terminal (33.3%) Choloylglycine hydrolase/NAAA C-terminal (33.3%) Peptidase C59 family enzymes (33.3%)" KHFLGDGVVTGYGTIEGR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.4.1.3 (80%) 6.-.-.- (20%)" "propionyl-CoA carboxylase (80%) Ligases (20%)" GO:0015977 (20.4%) GO:0009317 (20.4%) "GO:0004658 (25.5%) GO:0003989 (20.4%) GO:0016740 (11.2%)" carbon fixation (20.4%) acetyl-CoA carboxylase complex (20.4%) "propionyl-CoA carboxylase activity (25.5%) acetyl-CoA carboxylase activity (20.4%) transferase activity (11.2%)" "IPR011762 (20.2%) IPR029045 (20.2%) IPR034733 (20.2%)" "Acetyl-coenzyme A carboxyltransferase, N-terminal (20.2%) ClpP/crotonase-like domain superfamily (20.2%) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (20.2%)" LGNNEVMGAVDQAVGEVLNYYLEEHPKEAK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "5.6.2.2 (95%) 5.99.1.3 (5%)" "DNA topoisomerase (ATP-hydrolyzing) (95%) Transferred entry: 5.6.2.2 (5%)" "GO:0006265 (13.6%) GO:0006261 (10.6%) GO:0032259 (0.8%)" "GO:0005737 (12.1%) GO:0005694 (10.6%)" "GO:0003677 (13.6%) GO:0005524 (13.6%) GO:0046872 (10.6%)" "DNA topological change (13.6%) DNA-templated DNA replication (10.6%) methylation (0.8%)" "cytoplasm (12.1%) chromosome (10.6%)" "DNA binding (13.6%) ATP binding (13.6%) metal ion binding (10.6%)" "IPR000565 (7.6%) IPR001241 (7.6%) IPR006171 (7.6%)" "DNA topoisomerase, type IIA, subunit B (7.6%) DNA topoisomerase, type IIA (7.6%) TOPRIM domain (7.6%)" LFQWLGIVPGAEKPSVPFIMGVVNQR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.4.11.9 (100%) Xaa-Pro aminopeptidase (100%) GO:0006508 (25%) GO:0005829 (25%) "GO:0030145 (25%) GO:0070006 (25%)" proteolysis (25%) cytosol (25%) "manganese ion binding (25%) metalloaminopeptidase activity (25%)" "IPR000994 (20%) IPR007865 (20%) IPR029149 (20%)" "Peptidase M24 (20%) Aminopeptidase P, N-terminal (20%) Creatinase/Aminopeptidase P/Spt16, N-terminal (20%)" MTYEMPKLPYANNGLEPVISQATIDYHYGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 1.15.1.1 (100%) superoxide dismutase (100%) GO:0005737 (32.1%) "GO:0004784 (33.9%) GO:0046872 (33.9%)" cytoplasm (32.1%) "superoxide dismutase activity (33.9%) metal ion binding (33.9%)" "IPR001189 (16.8%) IPR019831 (16.8%) IPR019832 (16.8%)" "Manganese/iron superoxide dismutase (16.8%) Manganese/iron superoxide dismutase, N-terminal (16.8%) Manganese/iron superoxide dismutase, C-terminal (16.8%)" ILDEQAISYAGIQAEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 3.6.4.- (100%) Acting on ATP; involved in cellular and subcellular movement (100%) GO:0006353 (14.8%) GO:0005829 (13.7%) "GO:0003723 (14.3%) GO:0004386 (14.3%) GO:0005524 (14.3%)" DNA-templated transcription termination (14.8%) cytosol (13.7%) "RNA binding (14.3%) helicase activity (14.3%) ATP binding (14.3%)" "IPR011112 (10.3%) IPR036269 (10.3%) IPR000194 (9.9%)" "Rho termination factor-like, N-terminal (10.3%) Rho termination factor, N-terminal domain superfamily (10.3%) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (9.9%)" EGAELAFTYQNDKLK root 1.3.1.9 (100%) enoyl-[acyl-carrier-protein] reductase (NADH) (100%) "GO:0006633 (38.5%) GO:0009102 (21.5%) GO:0030497 (0.2%)" "GO:0005829 (0%) GO:0016020 (0%) GO:0032991 (0%)" "GO:0004318 (38.8%) GO:0016491 (0.3%) GO:0042802 (0.2%)" "fatty acid biosynthetic process (38.5%) biotin biosynthetic process (21.5%) fatty acid elongation (0.2%)" "cytosol (0%) membrane (0%) protein-containing complex (0%)" "enoyl-[acyl-carrier-protein] reductase (NADH) activity (38.8%) oxidoreductase activity (0.3%) identical protein binding (0.2%)" "IPR002347 (33.4%) IPR036291 (33.4%) IPR014358 (33.2%)" "Short-chain dehydrogenase/reductase SDR (33.4%) NAD(P)-binding domain superfamily (33.4%) Enoyl-[acyl-carrier-protein] reductase (NADH) (33.2%)" QVGEILFDKLK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.7.7 (100%) DNA-directed DNA polymerase (100%) "GO:0006261 (16.7%) GO:0006302 (16.7%) GO:0039693 (0.2%)" GO:0016020 (0.4%) "GO:0003677 (16.7%) GO:0003887 (16.7%) GO:0008408 (16.5%)" "DNA-templated DNA replication (16.7%) double-strand break repair (16.7%) viral DNA genome replication (0.2%)" membrane (0.4%) "DNA binding (16.7%) DNA-directed DNA polymerase activity (16.7%) 3'-5' exonuclease activity (16.5%)" "IPR001098 (7.4%) IPR002298 (7.4%) IPR012337 (7.4%)" "DNA-directed DNA polymerase, family A, palm domain (7.4%) DNA polymerase A (7.4%) Ribonuclease H-like superfamily (7.4%)" VTTELLSDYYFNK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.1.1.103 (66.7%) 5.1.3.- (33.3%)" "L-threonine 3-dehydrogenase (66.7%) Acting on carbohydrates and derivatives (33.3%)" GO:0006567 (50%) GO:0008743 (50%) L-threonine catabolic process (50%) L-threonine 3-dehydrogenase activity (50%) "IPR001509 (33.3%) IPR036291 (33.3%) IPR051225 (33.3%)" "NAD-dependent epimerase/dehydratase (33.3%) NAD(P)-binding domain superfamily (33.3%) NAD(P)-dependent epimerase/dehydratase (33.3%)" RAEAGNNFGTVLIPEGLIEFVPAMKR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0006002 (14.3%) GO:0009749 (14.3%)" GO:0005829 (14.3%) "GO:0003872 (14.3%) GO:0005524 (14.3%) GO:0046872 (14.3%)" "fructose 6-phosphate metabolic process (14.3%) response to glucose (14.3%)" cytosol (14.3%) "6-phosphofructokinase activity (14.3%) ATP binding (14.3%) metal ion binding (14.3%)" "IPR000023 (25%) IPR011183 (25%) IPR022953 (25%)" "Phosphofructokinase domain (25%) Pyrophosphate-dependent phosphofructokinase PfpB (25%) ATP-dependent 6-phosphofructokinase (25%)" QSLTVVYLGGSQPGTLR Escherichia coli Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli TYENMKNELQTYENNLGFLTTSSK Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides IPR007139 (100%) Protein of unknown function DUF349 (100%) TGATTQDAEVDDAKYGFVASGTLNPQK root 3.5.1.1 (100%) asparaginase (100%) "GO:0006528 (32.5%) GO:0006530 (0.2%) GO:0051289 (0.1%)" "GO:0042597 (32.5%) GO:0030313 (0.7%) GO:0030288 (0.1%)" "GO:0004067 (33.6%) GO:0016787 (0.2%) GO:0042802 (0.1%)" "asparagine metabolic process (32.5%) L-asparagine catabolic process (0.2%) protein homotetramerization (0.1%)" "periplasmic space (32.5%) cell envelope (0.7%) outer membrane-bounded periplasmic space (0.1%)" "asparaginase activity (33.6%) hydrolase activity (0.2%) identical protein binding (0.1%)" "IPR006034 (11.3%) IPR027473 (11.3%) IPR040919 (11.3%)" "Asparaginase/glutaminase-like (11.3%) L-asparaginase, C-terminal (11.3%) Asparaginase/glutaminase, C-terminal (11.3%)" DQEGQDVLLFVDNIFR root 7.1.2.2 (100%) H(+)-transporting two-sector ATPase (100%) GO:0042776 (16.2%) "GO:0045259 (19.6%) GO:0005739 (8.3%) GO:0005743 (7.8%)" "GO:0005524 (19.6%) GO:0046933 (19.6%) GO:0016787 (3.9%)" proton motive force-driven mitochondrial ATP synthesis (16.2%) "proton-transporting ATP synthase complex (19.6%) mitochondrion (8.3%) mitochondrial inner membrane (7.8%)" "ATP binding (19.6%) proton-transporting ATP synthase activity, rotational mechanism (19.6%) hydrolase activity (3.9%)" "IPR000194 (10.3%) IPR005722 (10.3%) IPR020003 (10.3%)" "ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (10.3%) ATP synthase, F1 complex, beta subunit (10.3%) ATPase, alpha/beta subunit, nucleotide-binding domain, active site (10.3%)" LNMYTAAPVNQTK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis GO:0009279 (100%) cell outer membrane (100%) IPR014941 (100%) Fimbrium subunit FimB/Mfa2/Mfa3 (100%) KKAELAAAEAAKQAEEAAAAAPAEEAPATESAE Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis GO:0006412 (25%) "GO:0005737 (25%) GO:0015935 (25%)" GO:0003735 (25%) translation (25%) "cytoplasm (25%) small ribosomal subunit (25%)" structural constituent of ribosome (25%) "IPR000307 (50%) IPR023803 (50%)" "Small ribosomal subunit protein bS16 (50%) Small ribosomal subunit protein bS16 domain superfamily (50%)" KVVADIAGVPAQINIAEVRKPELDAK root "GO:0006412 (19.9%) GO:0000028 (0.1%) GO:0002181 (0.1%)" "GO:0022627 (19.9%) GO:0005840 (0.4%) GO:0015934 (0.1%)" "GO:0003735 (20%) GO:0019843 (20%) GO:0003729 (19.5%)" "translation (19.9%) ribosomal small subunit assembly (0.1%) cytoplasmic translation (0.1%)" "cytosolic small ribosomal subunit (19.9%) ribosome (0.4%) large ribosomal subunit (0.1%)" "structural constituent of ribosome (20%) rRNA binding (20%) mRNA binding (19.5%)" "IPR004044 (11.2%) IPR009019 (11.2%) IPR015946 (11.2%)" "K Homology domain, type 2 (11.2%) K homology domain superfamily, prokaryotic type (11.2%) K homology domain-like, alpha/beta (11.2%)" ANDAAGDGTTTATVLAQAIITEGLK root 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.2%) GO:0006457 (0.1%) GO:0009314 (0.1%)" "GO:0005737 (16.4%) GO:0016020 (0.1%) GO:0005829 (0.1%)" "GO:0005524 (17.2%) GO:0140662 (17.2%) GO:0016853 (16.7%)" "protein refolding (17.2%) protein folding (0.1%) response to radiation (0.1%)" "cytoplasm (16.4%) membrane (0.1%) cytosol (0.1%)" "ATP binding (17.2%) ATP-dependent protein folding chaperone (17.2%) isomerase activity (16.7%)" "IPR001844 (17%) IPR002423 (17%) IPR027413 (17%)" "Chaperonin Cpn60/GroEL (17%) Chaperonin Cpn60/GroEL/TCP-1 family (17%) GroEL-like equatorial domain superfamily (17%)" IDLDAINQSTRPK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0005737 (25%) "GO:0003743 (25%) GO:0003924 (25%) GO:0005525 (25%)" cytoplasm (25%) "translation initiation factor activity (25%) GTPase activity (25%) GTP binding (25%)" "IPR000178 (8.7%) IPR000795 (8.7%) IPR005225 (8.7%)" "Translation initiation factor IF-2, bacterial-like (8.7%) Translational (tr)-type GTP-binding domain (8.7%) Small GTP-binding domain (8.7%)" EGVITVEEGSGLENELDVVEGMQFDR Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (17.2%) GO:0009408 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (16.5%) GO:0016020 (0.1%) GO:1990220 (0.1%)" "GO:0005524 (17.2%) GO:0140662 (17.2%) GO:0016853 (16.6%)" "protein refolding (17.2%) response to heat (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (16.5%) membrane (0.1%) GroEL-GroES complex (0.1%)" "ATP binding (17.2%) ATP-dependent protein folding chaperone (17.2%) isomerase activity (16.6%)" "IPR001844 (16.9%) IPR002423 (16.8%) IPR027409 (16.8%)" "Chaperonin Cpn60/GroEL (16.9%) Chaperonin Cpn60/GroEL/TCP-1 family (16.8%) GroEL-like apical domain superfamily (16.8%)" VVAGVANALAHKYH root "GO:0042744 (7.6%) GO:0030185 (0.4%) GO:0042542 (0.4%)" "GO:0005833 (9%) GO:0031838 (7.7%) GO:0072562 (7.3%)" "GO:0019825 (9.2%) GO:0020037 (9.2%) GO:0046872 (9.2%)" "hydrogen peroxide catabolic process (7.6%) nitric oxide transport (0.4%) response to hydrogen peroxide (0.4%)" "hemoglobin complex (9%) haptoglobin-hemoglobin complex (7.7%) blood microparticle (7.3%)" "oxygen binding (9.2%) heme binding (9.2%) metal ion binding (9.2%)" "IPR000971 (20.2%) IPR009050 (20.2%) IPR012292 (20.2%)" "Globin (20.2%) Globin-like superfamily (20.2%) Globin/Protoglobin (20.2%)" IAILMDTKGPEVR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.1.40 (100%) pyruvate kinase (100%) "GO:0006950 (13.5%) GO:0006096 (0.1%)" "GO:0005737 (0.1%) GO:0005829 (0.1%)" "GO:0016301 (17.3%) GO:0000287 (17.2%) GO:0004743 (17.2%)" "response to stress (13.5%) glycolytic process (0.1%)" "cytoplasm (0.1%) cytosol (0.1%)" "kinase activity (17.3%) magnesium ion binding (17.2%) pyruvate kinase activity (17.2%)" "IPR001697 (11.2%) IPR015793 (11.2%) IPR015813 (11.2%)" "Pyruvate kinase (11.2%) Pyruvate kinase, barrel (11.2%) Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (11.2%)" QLLMVSGFDRYFQIVK root "6.1.1.12 (98.6%) 6.1.1.23 (1.4%)" "aspartate--tRNA ligase (98.6%) aspartate--tRNA(Asn) ligase (1.4%)" "GO:0006422 (19.5%) GO:0006430 (0.1%)" GO:0005737 (19.3%) "GO:0004815 (19.5%) GO:0005524 (19.5%) GO:0003676 (19.3%)" "aspartyl-tRNA aminoacylation (19.5%) lysyl-tRNA aminoacylation (0.1%)" cytoplasm (19.3%) "aspartate-tRNA ligase activity (19.5%) ATP binding (19.5%) nucleic acid binding (19.3%)" "IPR004364 (9.2%) IPR006195 (9.1%) IPR045864 (9.1%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (9.2%) Aminoacyl-tRNA synthetase, class II (9.1%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (9.1%)" RLSAMIPVVAYIQPTVEVVK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR006665 (25%) IPR011990 (25%) IPR024480 (25%)" "OmpA-like domain (25%) Tetratricopeptide-like helical domain superfamily (25%) Domain of unknown function DUF3868 (25%)" SVFPNDGVLAR Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides GO:0016740 (100%) transferase activity (100%) "IPR011990 (44.4%) IPR019734 (44.4%) IPR013105 (11.1%)" "Tetratricopeptide-like helical domain superfamily (44.4%) Tetratricopeptide repeat (44.4%) Tetratricopeptide repeat 2 (11.1%)" FAPALNVSEEEVTTGLDR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae "2.6.1.81 (94.2%) 2.6.1.11 (5.2%) 2.6.1.17 (0.5%)" "succinylornithine transaminase (94.2%) acetylornithine transaminase (5.2%) succinyldiaminopimelate transaminase (0.5%)" "GO:0006593 (11.5%) GO:0019544 (11.5%) GO:0019545 (11.5%)" GO:0005737 (0.1%) "GO:0030170 (13.3%) GO:0042802 (13.3%) GO:0043825 (12.6%)" "L-ornithine catabolic process (11.5%) L-arginine catabolic process to L-glutamate (11.5%) L-arginine catabolic process to succinate (11.5%)" cytoplasm (0.1%) "pyridoxal phosphate binding (13.3%) identical protein binding (13.3%) succinylornithine transaminase activity (12.6%)" "IPR015422 (11.8%) IPR005814 (11.7%) IPR015424 (11.7%)" "Pyridoxal phosphate-dependent transferase, small domain (11.8%) Aminotransferase class-III (11.7%) Pyridoxal phosphate-dependent transferase (11.7%)" LAMENVYTPTALILSR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.2.1.1 (100%) transketolase (100%) GO:0006098 (25%) GO:0005829 (25%) "GO:0004802 (25%) GO:0046872 (25%)" pentose-phosphate shunt (25%) cytosol (25%) "transketolase activity (25%) metal ion binding (25%)" "IPR005474 (12.5%) IPR005475 (12.5%) IPR009014 (12.5%)" "Transketolase, N-terminal (12.5%) Transketolase-like, pyrimidine-binding domain (12.5%) Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II (12.5%)" VGPQQTLYIPGVWLK Bacteroidota Bacteria Pseudomonadati Bacteroidota 3.2.1.23 (100%) beta-galactosidase (100%) GO:0005975 (49.3%) GO:0016020 (1.3%) GO:0004565 (49.3%) carbohydrate metabolic process (49.3%) membrane (1.3%) beta-galactosidase activity (49.3%) "IPR001944 (12.5%) IPR008979 (12.5%) IPR017853 (12.5%)" "Glycoside hydrolase, family 35 (12.5%) Galactose-binding-like domain superfamily (12.5%) Glycoside hydrolase superfamily (12.5%)" GREFFFEGQR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" QLEHEVSLAQER Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides KFAEISADIFSANGIK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "5.4.2.2 (85%) 5.4.2.- (15%)" "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (85%) Phosphotransferases (phosphomutases) (15%)" "GO:0005975 (23.6%) GO:0006166 (23.6%)" "GO:0000287 (23.6%) GO:0008973 (23.6%) GO:0004614 (5.6%)" "carbohydrate metabolic process (23.6%) purine ribonucleoside salvage (23.6%)" "magnesium ion binding (23.6%) phosphopentomutase activity (23.6%) phosphoglucomutase activity (5.6%)" "IPR005841 (12.6%) IPR005844 (12.6%) IPR005845 (12.6%)" "Alpha-D-phosphohexomutase superfamily (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.6%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (12.6%)" IRPIINEIGKAPLIALTATATPK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "5.6.2.4 (92.2%) 3.6.4.12 (5.9%) 3.6.1.- (2%)" "DNA 3'-5' helicase (92.2%) DNA helicase (5.9%) In phosphorus-containing anhydrides (2%)" "GO:0006281 (8.4%) GO:0006310 (8.4%) GO:0006260 (8.2%)" "GO:0005737 (8.4%) GO:0030894 (8.4%) GO:0043590 (8.4%)" "GO:0009378 (8.4%) GO:0016787 (8.4%) GO:0043138 (8.4%)" "DNA repair (8.4%) DNA recombination (8.4%) DNA replication (8.2%)" "cytoplasm (8.4%) replisome (8.4%) bacterial nucleoid (8.4%)" "four-way junction helicase activity (8.4%) hydrolase activity (8.4%) 3'-5' DNA helicase activity (8.4%)" "IPR014001 (7.3%) IPR027417 (7.3%) IPR001650 (7.2%)" "Helicase superfamily 1/2, ATP-binding domain (7.3%) P-loop containing nucleoside triphosphate hydrolase (7.3%) Helicase, C-terminal domain-like (7.2%)" FGHEVHYEYALCGADAIDKVGDPFPEETYR Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 1.1.1.85 (100%) 3-isopropylmalate dehydrogenase (100%) GO:0009098 (20%) GO:0005829 (20%) "GO:0000287 (20%) GO:0003862 (20%) GO:0051287 (20%)" L-leucine biosynthetic process (20%) cytosol (20%) "magnesium ion binding (20%) 3-isopropylmalate dehydrogenase activity (20%) NAD binding (20%)" "IPR004429 (33.3%) IPR019818 (33.3%) IPR024084 (33.3%)" "Isopropylmalate dehydrogenase (33.3%) Isocitrate/isopropylmalate dehydrogenase, conserved site (33.3%) Isopropylmalate dehydrogenase-like domain (33.3%)" IAPDVEALAEEYKDQVIIGK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae GO:0045454 (33.3%) GO:0005829 (33.3%) GO:0015035 (33.3%) cell redox homeostasis (33.3%) cytosol (33.3%) protein-disulfide reductase activity (33.3%) "IPR005746 (25%) IPR013766 (25%) IPR017937 (25%)" "Thioredoxin (25%) Thioredoxin domain (25%) Thioredoxin, conserved site (25%)" LLVHPSTSPVPK root "GO:0015833 (21%) GO:0015031 (18.2%) GO:0006857 (0.2%)" "GO:0030288 (20.6%) GO:0043190 (18%) GO:0005886 (0.2%)" "GO:1904680 (21%) GO:1900750 (0.2%)" "peptide transport (21%) protein transport (18.2%) oligopeptide transport (0.2%)" "outer membrane-bounded periplasmic space (20.6%) ATP-binding cassette (ABC) transporter complex (18%) plasma membrane (0.2%)" "peptide transmembrane transporter activity (21%) oligopeptide binding (0.2%)" "IPR000914 (26.2%) IPR039424 (26%) IPR023765 (24.3%)" "Solute-binding protein family 5 domain (26.2%) Solute-binding protein family 5 (26%) Solute-binding protein family 5, conserved site (24.3%)" THAGSFDDLEKFLNTDKLPFLIK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides TDAPIVGTGIEAQVAR Tannerellaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae 2.7.7.6 (100%) DNA-directed RNA polymerase (100%) "GO:0006351 (17.9%) GO:0006508 (5.3%)" GO:0000428 (17.9%) "GO:0003677 (17.9%) GO:0003899 (17.9%) GO:0032549 (17.9%)" "DNA-templated transcription (17.9%) proteolysis (5.3%)" DNA-directed RNA polymerase complex (17.9%) "DNA binding (17.9%) DNA-directed RNA polymerase activity (17.9%) ribonucleoside binding (17.9%)" "IPR007120 (7.5%) IPR007121 (7.5%) IPR007641 (7.5%)" "DNA-directed RNA polymerase, subunit 2, hybrid-binding domain (7.5%) RNA polymerase, beta subunit, conserved site (7.5%) RNA polymerase Rpb2, domain 7 (7.5%)" SDVQAAKDDAAR root "GO:0030258 (16.1%) GO:0043580 (16.1%) GO:0006096 (0%)" "GO:0009279 (17.8%) GO:0005576 (17.1%) GO:0019867 (0.4%)" "GO:0008289 (16.1%) GO:0042834 (16.1%) GO:0005524 (0%)" "lipid modification (16.1%) periplasmic space organization (16.1%) glycolytic process (0%)" "cell outer membrane (17.8%) extracellular region (17.1%) outer membrane (0.4%)" "lipid binding (16.1%) peptidoglycan binding (16.1%) ATP binding (0%)" "IPR006817 (50.5%) IPR016367 (49.4%) IPR015795 (0%)" "Lipoprotein leucine-zipper (50.5%) Major outer membrane lipoprotein Lpp (49.4%) Pyruvate kinase, C-terminal (0%)" ALKQWGFENVHTVPEQMVK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "5.4.2.- (50%) 5.4.2.2 (50%)" "Phosphotransferases (phosphomutases) (50%) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (50%)" "GO:0005975 (24%) GO:0006166 (24%)" "GO:0000287 (24%) GO:0008973 (24%) GO:0004614 (4%)" "carbohydrate metabolic process (24%) purine ribonucleoside salvage (24%)" "magnesium ion binding (24%) phosphopentomutase activity (24%) phosphoglucomutase activity (4%)" "IPR005841 (12.5%) IPR005843 (12.5%) IPR005844 (12.5%)" "Alpha-D-phosphohexomutase superfamily (12.5%) Alpha-D-phosphohexomutase, C-terminal (12.5%) Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (12.5%)" AHNPNVQIVAVEPSDSPVLSGGKPGPHK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2.5.1.47 (100%) cysteine synthase (100%) GO:0006535 (44.8%) GO:0005737 (10.3%) GO:0004124 (44.8%) cysteine biosynthetic process from serine (44.8%) cytoplasm (10.3%) cysteine synthase activity (44.8%) "IPR001216 (16.7%) IPR001926 (16.7%) IPR005856 (16.7%)" "Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site (16.7%) Tryptophan synthase beta chain-like, PALP domain (16.7%) Cysteine synthase (16.7%)" ALQFGMPPTSGIGIGIDR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 6.1.1.6 (100%) lysine--tRNA ligase (100%) GO:0006430 (16.7%) GO:0005829 (16.7%) "GO:0000049 (16.7%) GO:0004824 (16.7%) GO:0005524 (16.7%)" lysyl-tRNA aminoacylation (16.7%) cytosol (16.7%) "tRNA binding (16.7%) lysine-tRNA ligase activity (16.7%) ATP binding (16.7%)" "IPR004364 (11.3%) IPR006195 (11.3%) IPR045864 (11.3%)" "Aminoacyl-tRNA synthetase, class II (D/K/N) (11.3%) Aminoacyl-tRNA synthetase, class II (11.3%) Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (11.3%)" TGHFDGIYTYTFTDTDTYLK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola GO:0009279 (100%) cell outer membrane (100%) "IPR011990 (33.3%) IPR012944 (33.3%) IPR033985 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) RagB/SusD domain (33.3%) SusD-like, N-terminal (33.3%)" GVPVGLGEPVFGK root "4.2.3.5 (96.3%) 6.2.1.5 (3.7%)" "chorismate synthase (96.3%) succinate--CoA ligase (ADP-forming) (3.7%)" "GO:0008652 (14.8%) GO:0009073 (14.8%) GO:0009423 (14.8%)" "GO:0005829 (13.6%) GO:0005737 (0.6%) GO:0005739 (0.6%)" "GO:0004107 (14.8%) GO:0010181 (13.6%) GO:0003676 (1.2%)" "amino acid biosynthetic process (14.8%) aromatic amino acid family biosynthetic process (14.8%) chorismate biosynthetic process (14.8%)" "cytosol (13.6%) cytoplasm (0.6%) mitochondrion (0.6%)" "chorismate synthase activity (14.8%) FMN binding (13.6%) nucleic acid binding (1.2%)" "IPR000453 (21.6%) IPR035904 (21.6%) IPR020541 (20.7%)" "Chorismate synthase (21.6%) Chorismate synthase AroC superfamily (21.6%) Chorismate synthase, conserved site (20.7%)" EWGGPGEPWVR Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae "IPR011990 (50%) IPR041662 (50%)" "Tetratricopeptide-like helical domain superfamily (50%) SusD-like 2 (50%)" VPYKVVKGDNNTPR Bacteroidota Bacteria Pseudomonadati Bacteroidota 1.3.1.74 (100%) 2-alkenal reductase [NAD(P)(+)] (100%) "GO:0042026 (0.1%) GO:0051085 (0.1%)" "GO:0005737 (2.6%) GO:0070013 (0.1%)" "GO:0005524 (32.3%) GO:0140662 (32.3%) GO:0051082 (31.5%)" "protein refolding (0.1%) obsolete chaperone cofactor-dependent protein refolding (0.1%)" "cytoplasm (2.6%) intracellular organelle lumen (0.1%)" "ATP binding (32.3%) ATP-dependent protein folding chaperone (32.3%) unfolded protein binding (31.5%)" "IPR013126 (16.9%) IPR018181 (16.9%) IPR043129 (16.9%)" "Heat shock protein 70 family (16.9%) Heat shock protein 70, conserved site (16.9%) ATPase, nucleotide binding domain (16.9%)" NSDLGLNPTNDGQVIR Peptostreptococcaceae Bacteria Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae GO:0006415 (33.3%) GO:0005737 (33.3%) GO:0043023 (33.3%) translational termination (33.3%) cytoplasm (33.3%) ribosomal large subunit binding (33.3%) "IPR002661 (33.3%) IPR023584 (33.3%) IPR036191 (33.3%)" "Ribosome recycling factor (33.3%) Ribosome recycling factor domain (33.3%) RRF superfamily (33.3%)" EGIEAKPEIMVPLTGILYEFKEQEK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 2.7.9.1 (100%) pyruvate, phosphate dikinase (100%) "GO:0005524 (25%) GO:0016301 (25%) GO:0046872 (25%)" "ATP binding (25%) kinase activity (25%) metal ion binding (25%)" "IPR000121 (10.1%) IPR002192 (10.1%) IPR008279 (10.1%)" "PEP-utilising enzyme, C-terminal (10.1%) Pyruvate phosphate dikinase, AMP/ATP-binding (10.1%) PEP-utilising enzyme, mobile domain (10.1%)" SEKYIVTWDMLQIHAR root "2.4.2.22 (83.6%) 2.4.2.- (16.4%)" "xanthine phosphoribosyltransferase (83.6%) Pentosyltransferases (16.4%)" "GO:0032263 (10.5%) GO:0032264 (10.5%) GO:0032265 (10.5%)" "GO:0005829 (10.4%) GO:0005886 (10.4%) GO:0032991 (0.1%)" "GO:0000310 (10.5%) GO:0004422 (10.5%) GO:0000287 (9.8%)" "GMP salvage (10.5%) IMP salvage (10.5%) XMP salvage (10.5%)" "cytosol (10.4%) plasma membrane (10.4%) protein-containing complex (0.1%)" "xanthine phosphoribosyltransferase activity (10.5%) hypoxanthine phosphoribosyltransferase activity (10.5%) magnesium ion binding (9.8%)" "IPR023747 (33.4%) IPR029057 (33.4%) IPR000836 (33.2%)" "Xanthine-guanine phosphoribosyltransferase (33.4%) Phosphoribosyltransferase-like (33.4%) Phosphoribosyltransferase domain (33.2%)" LTKPVELIATLDDSAK Enterobacterales Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales "1.8.1.- (97%) 1.6.4.- (3%)" "With NAD(+) or NADP(+) as acceptor (97%) With a disulfide as acceptor (3%)" "GO:0000302 (14.2%) GO:0045454 (0%) GO:0006979 (0%)" "GO:0005829 (14.1%) GO:0032991 (14.1%) GO:0009321 (0%)" "GO:0051287 (14.2%) GO:0102039 (14.2%) GO:0050660 (14.2%)" "response to reactive oxygen species (14.2%) cell redox homeostasis (0%) response to oxidative stress (0%)" "cytosol (14.1%) protein-containing complex (14.1%) alkyl hydroperoxide reductase complex (0%)" "NAD binding (14.2%) NADH-dependent peroxiredoxin activity (14.2%) flavin adenine dinucleotide binding (14.2%)" "IPR036249 (11.4%) IPR044142 (11.4%) IPR012336 (11.2%)" "Thioredoxin-like superfamily (11.4%) AhpF, N-terminal domain, N-terminal TRX-fold subdomain (11.4%) Thioredoxin-like fold (11.2%)" NQDFNHMPAAQWVVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis IPR045963 (100%) Domain of unknown function DUF6383 (100%) GLPLGLVTNKPTPFVAPLLEALDIAK root "3.1.3.18 (99.5%) 6.1.1.2 (0.5%)" "phosphoglycolate phosphatase (99.5%) tryptophan--tRNA ligase (0.5%)" "GO:0006281 (16.7%) GO:0005975 (16.6%) GO:0046295 (15.7%)" GO:0005829 (16.8%) "GO:0008967 (16.8%) GO:0046872 (16.6%) GO:0016787 (0.3%)" "DNA repair (16.7%) carbohydrate metabolic process (16.6%) glycolate biosynthetic process (15.7%)" cytosol (16.8%) "phosphoglycolate phosphatase activity (16.8%) metal ion binding (16.6%) hydrolase activity (0.3%)" "IPR023214 (16.3%) IPR036412 (16.3%) IPR006439 (16.3%)" "HAD superfamily (16.3%) HAD-like superfamily (16.3%) HAD hydrolase, subfamily IA (16.3%)" GIFPASVDLTTDLHSMGQWIQDGER Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 5.3.1.9 (100%) glucose-6-phosphate isomerase (100%) "GO:0006094 (14.3%) GO:0006096 (14.3%) GO:0051156 (14.3%)" GO:0005829 (14.3%) "GO:0004347 (14.3%) GO:0048029 (14.3%) GO:0097367 (14.3%)" "gluconeogenesis (14.3%) glycolytic process (14.3%) glucose 6-phosphate metabolic process (14.3%)" cytosol (14.3%) "glucose-6-phosphate isomerase activity (14.3%) monosaccharide binding (14.3%) carbohydrate derivative binding (14.3%)" "IPR001672 (20%) IPR018189 (20%) IPR035476 (20%)" "Phosphoglucose isomerase (PGI) (20%) Phosphoglucose isomerase, conserved site (20%) Phosphoglucose isomerase, SIS domain 1 (20%)" IDSGVQTIVGVNK Pseudomonadati Bacteria Pseudomonadati 5.4.99.2 (100%) methylmalonyl-CoA mutase (100%) GO:0019678 (20%) GO:0005737 (20%) "GO:0004494 (20%) GO:0031419 (20%) GO:0046872 (20%)" propionate metabolic process, methylmalonyl pathway (20%) cytoplasm (20%) "methylmalonyl-CoA mutase activity (20%) cobalamin binding (20%) metal ion binding (20%)" "IPR006098 (16.7%) IPR006099 (16.7%) IPR006158 (16.7%)" "Methylmalonyl-CoA mutase, alpha chain, catalytic (16.7%) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic (16.7%) Cobalamin (vitamin B12)-binding domain (16.7%)" MTIEQILEAIENMK Clostridia Bacteria Bacillati Bacillota Clostridia GO:0006412 (25%) GO:0022625 (25%) "GO:0003729 (25%) GO:0003735 (25%)" translation (25%) cytosolic large ribosomal subunit (25%) "mRNA binding (25%) structural constituent of ribosome (25%)" "IPR000206 (20%) IPR008932 (20%) IPR013823 (20%)" "Large ribosomal subunit protein bL12 (20%) Large ribosomal subunit protein bL12, oligomerization (20%) Large ribosomal subunit protein bL12, C-terminal (20%)" ALFGETISNPSIDVLDIEK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "2.5.1.49 (40%) 4.4.1.11 (40%) 2.5.1.48 (20%)" "O-acetylhomoserine aminocarboxypropyltransferase (40%) methionine gamma-lyase (40%) cystathionine gamma-synthase (20%)" "GO:0006535 (13.9%) GO:0019346 (13.9%) GO:0071269 (13.9%)" GO:0005737 (13.4%) "GO:0003961 (13.9%) GO:0004124 (13.9%) GO:0030170 (13.9%)" "cysteine biosynthetic process from serine (13.9%) transsulfuration (13.9%) L-homocysteine biosynthetic process (13.9%)" cytoplasm (13.4%) "O-acetylhomoserine aminocarboxypropyltransferase activity (13.9%) cysteine synthase activity (13.9%) pyridoxal phosphate binding (13.9%)" "IPR000277 (20%) IPR006235 (20%) IPR015421 (20%)" "Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (20%) O-acetylhomoserine/O-acetylserine sulfhydrylase (20%) Pyridoxal phosphate-dependent transferase, major domain (20%)" SVDTSMGLTPVEGLLMGTR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 2.7.2.1 (100%) acetate kinase (100%) "GO:0006083 (17.5%) GO:0006085 (15.9%)" GO:0005737 (15.9%) "GO:0005524 (17.5%) GO:0008776 (17.5%) GO:0000287 (15.9%)" "acetate metabolic process (17.5%) acetyl-CoA biosynthetic process (15.9%)" cytoplasm (15.9%) "ATP binding (17.5%) acetate kinase activity (17.5%) magnesium ion binding (15.9%)" "IPR000890 (25%) IPR004372 (25%) IPR023865 (25%)" "Aliphatic acid kinase, short-chain (25%) Acetate/propionate kinase (25%) Aliphatic acid kinase, short-chain, conserved site (25%)" TQANTSVIFVPAR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "6.2.1.5 (94.4%) 6.2.1.- (5.6%)" "succinate--CoA ligase (ADP-forming) (94.4%) Acid--thiol ligases (5.6%)" GO:0006099 (20%) GO:0009361 (20%) "GO:0000166 (20%) GO:0004775 (20%) GO:0004776 (20%)" tricarboxylic acid cycle (20%) succinate-CoA ligase complex (ADP-forming) (20%) "nucleotide binding (20%) succinate-CoA ligase (ADP-forming) activity (20%) succinate-CoA ligase (GDP-forming) activity (20%)" "IPR003781 (14.3%) IPR005810 (14.3%) IPR005811 (14.3%)" "CoA-binding (14.3%) Succinyl-CoA ligase, alpha subunit (14.3%) ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain (14.3%)" ELKPDQKDLWLQGLYR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "IPR011990 (33.3%) IPR019734 (33.3%) IPR051685 (33.3%)" "Tetratricopeptide-like helical domain superfamily (33.3%) Tetratricopeptide repeat (33.3%) Ycf3/AcsC/BcsC/TPR Multifunctional (33.3%)" LLPWIDGLLDAGEK root "4.1.2.13 (99.9%) 4.1.2.- (0.1%)" "fructose-bisphosphate aldolase (99.9%) Aldehyde-lyases (0.1%)" "GO:0006096 (20%) GO:0006094 (20%)" GO:0005829 (20%) "GO:0004332 (20%) GO:0008270 (20%) GO:0016829 (0.1%)" "glycolytic process (20%) gluconeogenesis (20%)" cytosol (20%) "fructose-bisphosphate aldolase activity (20%) zinc ion binding (20%) lyase activity (0.1%)" "IPR006411 (33.4%) IPR000771 (33.3%) IPR013785 (33.3%)" "Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype (33.4%) Fructose-bisphosphate aldolase, class-II (33.3%) Aldolase-type TIM barrel (33.3%)" NKQASIMLSVK Parabacteroides distasonis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis "IPR003489 (50%) IPR036567 (50%)" "Ribosome hibernation promoting factor/RaiA (50%) Ribosome hibernation promotion factor-like (50%)" LLIQQEPDASSFPNGGIR Bacteroidota Bacteria Pseudomonadati Bacteroidota 6.3.1.2 (100%) glutamine synthetase (100%) GO:0006542 (49.4%) GO:0005737 (0.2%) "GO:0004356 (49.4%) GO:0046872 (0.4%) GO:0000166 (0.2%)" glutamine biosynthetic process (49.4%) cytoplasm (0.2%) "glutamine synthetase activity (49.4%) metal ion binding (0.4%) nucleotide binding (0.2%)" "IPR008147 (14.4%) IPR022147 (14.4%) IPR052725 (14.4%)" "Glutamine synthetase, N-terminal domain (14.4%) Glutamine synthetase type III N-terminal (14.4%) Glutamine Synthetase Type-3 (14.4%)" RHGEMKPVIQK root 2.7.1.90 (100%) diphosphate--fructose-6-phosphate 1-phosphotransferase (100%) "GO:0009749 (14.4%) GO:0006002 (14.1%)" "GO:0005829 (14.3%) GO:0005737 (0.1%)" "GO:0003872 (14.4%) GO:0047334 (14.4%) GO:0005524 (14.1%)" "response to glucose (14.4%) fructose 6-phosphate metabolic process (14.1%)" "cytosol (14.3%) cytoplasm (0.1%)" "6-phosphofructokinase activity (14.4%) diphosphate-fructose-6-phosphate 1-phosphotransferase activity (14.4%) ATP binding (14.1%)" "IPR035966 (25.4%) IPR000023 (24.9%) IPR011183 (24.9%)" "Phosphofructokinase superfamily (25.4%) Phosphofructokinase domain (24.9%) Pyrophosphate-dependent phosphofructokinase PfpB (24.9%)" GIPQEAIDKLQPIILLSGSNEEKLETLK Bacteroidaceae Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae 6.1.1.21 (100%) histidine--tRNA ligase (100%) "GO:0006427 (24.6%) GO:0006418 (0.9%)" GO:0005737 (24.6%) "GO:0004821 (25.4%) GO:0005524 (24.6%)" "histidyl-tRNA aminoacylation (24.6%) tRNA aminoacylation for protein translation (0.9%)" cytoplasm (24.6%) "histidine-tRNA ligase activity (25.4%) ATP binding (24.6%)" "IPR004154 (12.7%) IPR036621 (12.7%) IPR041715 (12.7%)" "Anticodon-binding (12.7%) Anticodon-binding domain superfamily (12.7%) Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain (12.7%)" VDTAVDKLLEANGSDEAK Bifidobacteriaceae Bacteria Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae 2.2.1.2 (100%) transaldolase (100%) "GO:0005975 (25%) GO:0006098 (25%)" GO:0005737 (25%) GO:0004801 (25%) "carbohydrate metabolic process (25%) pentose-phosphate shunt (25%)" cytoplasm (25%) transaldolase activity (25%) "IPR001585 (26.6%) IPR004732 (26.6%) IPR013785 (26.6%)" "Transaldolase/Fructose-6-phosphate aldolase (26.6%) Transaldolase type 2 (26.6%) Aldolase-type TIM barrel (26.6%)" KLLIIAEDVEGEALSTLVVNK Peptostreptococcales Bacteria Bacillati Bacillota Clostridia Peptostreptococcales 5.6.1.7 (100%) chaperonin ATPase (100%) "GO:0042026 (18.7%) GO:0009408 (0.7%) GO:0010447 (0.7%)" "GO:0005737 (12.7%) GO:0005615 (0.7%) GO:0005886 (0.7%)" "GO:0140662 (18.7%) GO:0005524 (17.9%) GO:0016853 (12.7%)" "protein refolding (18.7%) response to heat (0.7%) response to acidic pH (0.7%)" "cytoplasm (12.7%) extracellular space (0.7%) plasma membrane (0.7%)" "ATP-dependent protein folding chaperone (18.7%) ATP binding (17.9%) isomerase activity (12.7%)" "IPR001844 (19.2%) IPR027409 (19.2%) IPR002423 (18.5%)" "Chaperonin Cpn60/GroEL (19.2%) GroEL-like apical domain superfamily (19.2%) Chaperonin Cpn60/GroEL/TCP-1 family (18.5%)" ATIMALGEMR Bacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides "GO:0006412 (17.4%) GO:0042254 (15.2%)" "GO:0015935 (17.4%) GO:0005737 (15.2%)" "GO:0003735 (17.4%) GO:0019843 (17.4%)" "translation (17.4%) ribosome biogenesis (15.2%)" "small ribosomal subunit (17.4%) cytoplasm (15.2%)" "structural constituent of ribosome (17.4%) rRNA binding (17.4%)" "IPR000851 (14.3%) IPR005324 (14.3%) IPR005712 (14.3%)" "Small ribosomal subunit protein uS5 (14.3%) Small ribosomal subunit protein uS5, C-terminal (14.3%) Small ribosomal subunit protein uS5, bacteria (14.3%)" FVCVDGPEFDGHQVDFDEMLKR Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales "1.4.1.13 (84.7%) 1.4.1.14 (15.3%)" "glutamate synthase (NADPH) (84.7%) glutamate synthase (NADH) (15.3%)" "GO:0051536 (48.7%) GO:0016491 (36%) GO:0004355 (13%)" "iron-sulfur cluster binding (48.7%) oxidoreductase activity (36%) glutamate synthase (NADPH) activity (13%)" "IPR009051 (10.3%) IPR019480 (10.3%) IPR028261 (10.3%)" "Alpha-helical ferredoxin (10.3%) Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain (10.3%) Dihydroprymidine dehydrogenase domain II (10.3%)" DMTVISNASCTTNCLAPLAK root "1.2.1.- (79.2%) 1.2.1.12 (20.8%)" "With NAD(+) or NADP(+) as acceptor (79.2%) glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (20.8%)" "GO:0006006 (22%) GO:0006096 (5.6%)" "GO:0005829 (5.6%) GO:0005739 (0.5%) GO:0030312 (0.5%)" "GO:0050661 (22%) GO:0051287 (22%) GO:0016620 (16.4%)" "glucose metabolic process (22%) glycolytic process (5.6%)" "cytosol (5.6%) mitochondrion (0.5%) external encapsulating structure (0.5%)" "NADP binding (22%) NAD binding (22%) oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (16.4%)" "IPR006424 (16.7%) IPR020828 (16.7%) IPR020829 (16.7%)" "Glyceraldehyde-3-phosphate dehydrogenase, type I (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (16.7%) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (16.7%)" KFVTAYLGDAGMLR Enterobacteriaceae Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae GO:0006952 (0.5%) "GO:0042597 (47.5%) GO:0030288 (0.5%)" "GO:0004867 (51.2%) GO:0042803 (0.5%)" defense response (0.5%) "periplasmic space (47.5%) outer membrane-bounded periplasmic space (0.5%)" "serine-type endopeptidase inhibitor activity (51.2%) protein homodimerization activity (0.5%)" "IPR005658 (25.3%) IPR036198 (25.3%) IPR027438 (25.1%)" "Proteinase inhibitor I11, ecotin (25.3%) Ecotin superfamily (25.3%) Ecotin, C-terminal (25.1%)" YHDADVTAFGYEYGQLPGCPAGFK Gammaproteobacteria Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria "3.2.2.9 (96.8%) 3.2.2.16 (3.2%)" "adenosylhomocysteine nucleosidase (96.8%) methylthioadenosine nucleosidase (3.2%)" "GO:0019284 (16.6%) GO:0019509 (16.6%) GO:0046124 (16%)" "GO:0005829 (16.6%) GO:0016020 (0%)" "GO:0008782 (16.6%) GO:0008930 (16.6%) GO:0016798 (0.2%)" "L-methionine salvage from S-adenosylmethionine (16.6%) L-methionine salvage from methylthioadenosine (16.6%) purine deoxyribonucleoside catabolic process (16%)" "cytosol (16.6%) membrane (0%)" "adenosylhomocysteine nucleosidase activity (16.6%) methylthioadenosine nucleosidase activity (16.6%) hydrolase activity, acting on glycosyl bonds (0.2%)" "IPR000845 (33.4%) IPR010049 (33.4%) IPR035994 (33.3%)" "Nucleoside phosphorylase domain (33.4%) MTA/SAH nucleosidase (33.4%) Nucleoside phosphorylase superfamily (33.3%)" KGLAKPVGSMTQYDK Bacteroidales Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales 5.5.1.4 (100%) inositol-3-phosphate synthase (100%) "GO:0006021 (29.2%) GO:0008654 (29.2%)" GO:0016020 (12.5%) GO:0004512 (29.2%) "inositol biosynthetic process (29.2%) phospholipid biosynthetic process (29.2%)" membrane (12.5%) inositol-3-phosphate synthase activity (29.2%) "IPR002587 (33.6%) IPR013021 (33.2%) IPR036291 (33.2%)" "Myo-inositol-1-phosphate synthase (33.6%) Myo-inositol-1-phosphate synthase, GAPDH-like (33.2%) NAD(P)-binding domain superfamily (33.2%)" LTPEQNLIATVHYLDALEWQKEVVK Parabacteroides Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides 1.12.99.6 (100%) hydrogenase (acceptor) (100%) GO:0030313 (32.1%) "GO:0008901 (32.1%) GO:0016151 (32.1%) GO:0033748 (3.6%)" cell envelope (32.1%) "ferredoxin hydrogenase activity (32.1%) nickel cation binding (32.1%) hydrogenase (acceptor) activity (3.6%)" "IPR001501 (25%) IPR018194 (25%) IPR029014 (25%)" "Nickel-dependent hydrogenase, large subunit (25%) Nickel-dependent hydrogenase, large subunit, nickel binding site (25%) [NiFe]-hydrogenase, large subunit (25%)" AETLTAYEDKVSDEPLISEKPQGGK Phocaeicola Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola "3.4.24.55 (66.7%) 3.4.24.- (33.3%)" "pitrilysin (66.7%) Metalloendopeptidases (33.3%)" GO:0006508 (34%) "GO:0004222 (34%) GO:0046872 (32%)" proteolysis (34%) "metalloendopeptidase activity (34%) metal ion binding (32%)" "IPR001431 (20.2%) IPR007863 (20.2%) IPR011765 (20.2%)" "Peptidase M16, zinc-binding site (20.2%) Peptidase M16, C-terminal (20.2%) Peptidase M16, N-terminal (20.2%)" IDKIKSEVDELKSAIAGK Bacteroides fragilis Bacteria Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis "IPR003743 (50%) IPR052376 (50%)" "C4-type zinc ribbon domain (50%) Oxidative Scavengers and Glycosyltransferases (50%)"