{"text_format":"3","workbook":"xlsx","n_sheets":2,"sheets":["Urine_cfDNA","AmnioticFluid_cfDNA"],"read":"whole","date_system":"1900"}

{"sheet":"Urine_cfDNA","index":0,"n_rows":45,"n_cols":37,"rows_kept":45}
["SAMPLE NAME","SAMPLE ID","PATIENT ID","SAMPLE DAY POST TX","COHORT","STATUS","SECONDARY STATUS","DONOR GENDER","RECIPIENT GENDER","URINE COLLECTION METHOD","URINE CULTURE","PRIMARY UC BACTERIA","PRIMARY UC BACTERIA LOAD, CFU/mL","SECONDARY UC BACTERIA","SECONDARY UC BACTERIA LOAD, CFU/mL.","Antibiotic Resistance Testing","Vancomycin Resistant","WBC Lower Limit","RBC Lower Limit","Sequencing Platform ","Sequencing Read Length","hg19-aligned Paired Reads","Adjusted BLAST HITs","Raw Sequencing Reads","BLAST Hits to Human Reads","Fraction Host DNA","Collaborator_Lab","Region_of_origin","Volume_biofluid_ul","Volume_extracted_ul","Concentration_extracted","Volume_into_libprep","Biomass_at_libprep_ng","Date_extraction","Batch_extraction","Date_libprep","Batch_libprep"]
["GU1125","GEM-US-1125","GEM-107",6,"UTI","UTI","NA","Female","Female","Clean Catch","Yes","Escherichia coli",100000,"NA","NA","Yes","NA",50,50,"Illumina NextSeq ","2x75 bp ",{"v":7360000,"d":"7.36E+06"},{"v":2920000,"d":"2.92E+06"},{"v":26800000,"d":"2.68E+07"},{"v":0.397,"d":"3.97E-01"},{"$f":"V2/X2","v":{"v":0.2746268656716418,"d":"2.75E-01"}},"NYPresbyterian_USA","New York, New York, USA",1000,32,0.735,12,8.82,110517,1,111217,2]
["GU12","GEM-US-342","GEM-033",32,"No UTI","No UTI","NA","Male","Female","Clean Catch","Yes","NEG","NA","NA","NA","No","NA",8,3,"Illumina NextSeq ","2x75 bp ",{"v":2950000,"d":"2.95E+06"},{"v":12600,"d":"1.26E+04"},{"v":8620000,"d":"8.62E+06"},{"v":0.00429,"d":"4.29E-03"},{"$f":"V3/X3","v":{"v":0.3422273781902552,"d":"3.42E-01"}},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.547,15,8.205,62816,0,80216,0]
["GU1209","GEM-US-1209","GEM-099",30,"UTI","UTI","NA","Female","Male","Clean Catch","Yes","Enterococcus faecalis",100000,"NA","NA","Yes","Susceptible",30,22,"Illumina NextSeq ","2x75 bp ",{"v":7260000,"d":"7.26E+06"},{"v":202000,"d":"2.02E+05"},{"v":24600000,"d":"2.46E+07"},{"v":0.0278,"d":"2.78E-02"},{"v":0.2951219512195122,"d":"2.95E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,32,0.623,12,7.476,110517,1,111217,0]
["GU13","GEM-US-349","GEM-037",28,"No UTI","No UTI","NA","Female","Female","Clean Catch","Yes","NEG","NA","NA","NA","No","NA",5,3,"Illumina NextSeq ","2x75 bp ",{"v":6290000,"d":"6.29E+06"},{"v":80400,"d":"8.04E+04"},{"v":20400000,"d":"2.04E+07"},{"v":0.0128,"d":"1.28E-02"},{"v":0.30833333333333335,"d":"3.08E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,1.66,15,24.9,62816,0,80216,0]
["GU1423","GEM-US-1423","GEM-121",11,"UTI","UTI","NA","Female","Female","Clean Catch","Yes","Escherichia coli",50000,"NA","NA","Yes","NA",14,5,"Illumina NextSeq ","2x75 bp ",{"v":9370000,"d":"9.37E+06"},{"v":64400,"d":"6.44E+04"},{"v":29800000,"d":"2.98E+07"},{"v":0.00687,"d":"6.87E-03"},{"v":0.3144295302013423,"d":"3.14E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,32,0.633,12,7.596,110517,1,111217,1]
["GU1495","GEM-US-1495","GEM-062",138,"UTI","UTI","NA","Female","Female","Clean Catch","Yes","Escherichia coli",100000,"NA","NA","Yes","NA",13,4,"Illumina NextSeq ","2x75 bp ",{"v":6430000,"d":"6.43E+06"},{"v":8510000,"d":"8.51E+06"},{"v":31200000,"d":"3.12E+07"},{"v":1.32,"d":"1.32E+00"},{"v":0.20608974358974358,"d":"2.06E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,80,0.232,29,6.728,110517,0,111217,2]
["GU18","GEM-US-512","GEM-061",9,"No UTI","No UTI","NA","Female","Male","Clean Catch","Yes","NEG","NA","NA","NA","No","NA",6,50,"Illumina NextSeq ","2x75 bp ",{"v":4620000,"d":"4.62E+06"},{"v":4710,"d":"4.71E+03"},{"v":17500000,"d":"1.75E+07"},{"v":0.00102,"d":"1.02E-03"},{"v":0.264,"d":"2.64E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.957,15,14.355,62816,0,82416,0]
["GU19","GEM-US-597","GEM-046",46,"UTI","UTI","NA","Female","Male","Clean Catch","Yes","Escherichia coli",100000,"NA","NA","Yes","NA","NA","NA","Illumina NextSeq ","2x75 bp ",{"v":4300000,"d":"4.30E+06"},{"v":186000,"d":"1.86E+05"},{"v":17600000,"d":"1.76E+07"},{"v":0.0432,"d":"4.32E-02"},{"v":0.24431818181818182,"d":"2.44E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,1.71,15,25.65,62816,0,82416,0]
["GU21","GEM-US-666","GEM-061",29,"No UTI","No UTI","NA","Female","Male","Clean Catch","Yes","NEG","NA","NA","NA","No","NA","NA","NA","Illumina NextSeq ","2x75 bp ",{"v":2580000,"d":"2.58E+06"},{"v":62700,"d":"6.27E+04"},{"v":13400000,"d":"1.34E+07"},{"v":0.0243,"d":"2.43E-02"},{"v":0.1925373134328358,"d":"1.93E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.382,15,5.73,62916,0,82416,0]
["GU2157","GEM-US-2157","GEM-172",25,"UTI","UTI","NA","Female","Female","Clean Catch","Yes","Escherichia coli",40000,"NA","NA","Yes","NA",16,7,"Illumina NextSeq ","2x75 bp ",{"v":9420000,"d":"9.42E+06"},{"v":168000,"d":"1.68E+05"},{"v":32500000,"d":"3.25E+07"},{"v":0.0179,"d":"1.79E-02"},{"v":0.28984615384615386,"d":"2.90E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,32,0.571,12,6.852,110517,2,111217,2]
["GU22","GEM-US-679","GEM-074",9,"No UTI","No UTI","NA","Female","Male","Clean Catch","Yes","NEG","NA","NA","NA","No","NA",0,50,"Illumina NextSeq ","2x75 bp ",{"v":5080000,"d":"5.08E+06"},{"v":628,"d":"6.28E+02"},{"v":19900000,"d":"1.99E+07"},{"v":0.000124,"d":"1.24E-04"},{"v":0.2552763819095477,"d":"2.55E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,2.35,15,35.25,62916,0,82416,0]
["GU2460","GEM-US-2460","GEM-162",75,"UTI","UTI","NA","Male","Male","Clean Catch","Yes","Escherichia coli",50000,"NA","NA","Yes","NA","NA","NA","Illumina NextSeq ","2x75 bp ",{"v":8920000,"d":"8.92E+06"},{"v":348000,"d":"3.48E+05"},{"v":29900000,"d":"2.99E+07"},{"v":0.039,"d":"3.90E-02"},{"v":0.2983277591973244,"d":"2.98E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,32,0.419,12,5.028,110517,1,111217,1]
["GU25","GEM-US-1004","GEM-090",27,"No UTI","No UTI","NA","Male","Male","Clean Catch","Yes","NEG","NA","NA","NA","No","NA",3,3,"Illumina NextSeq ","2x75 bp ",{"v":7720000,"d":"7.72E+06"},{"v":48200,"d":"4.82E+04"},{"v":31900000,"d":"3.19E+07"},{"v":0.00625,"d":"6.25E-03"},{"v":0.24200626959247648,"d":"2.42E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.379,15,5.685,90716,0,91416,0]
["GU26","GEM-US-1181","GEM-071",83,"No UTI","No UTI","NA","Male","Male","Clean Catch","Yes","NEG","NA","NA","NA","No","NA",0,2,"Illumina NextSeq ","2x75 bp ",{"v":1550000,"d":"1.55E+06"},{"v":17500,"d":"1.75E+04"},{"v":8770000,"d":"8.77E+06"},{"v":0.0113,"d":"1.13E-02"},{"v":0.17673888255416192,"d":"1.77E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.353,15,5.295,91416,0,92816,0]
["GU2709","GEM-US-2709","GEM-207",29,"UTI","UTI","NA","Male","Female","Clean Catch","Yes","Escherichia coli",100000,"NA","NA","Yes","NA",33,23,"Illumina NextSeq ","2x75 bp ",{"v":7100000,"d":"7.10E+06"},{"v":8340000,"d":"8.34E+06"},{"v":26900000,"d":"2.69E+07"},{"v":1.18,"d":"1.18E+00"},{"v":0.26394052044609667,"d":"2.64E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,32,0.729,12,8.748,110517,2,111217,2]
["GU29","GEM-US-1190","GEM-106",13,"No UTI","No UTI","NA","Male","Male","Clean Catch","Yes","NEG","NA","NA","NA","No","NA",4,5,"Illumina NextSeq ","2x75 bp ",{"v":4890000,"d":"4.89E+06"},{"v":522000,"d":"5.22E+05"},{"v":15200000,"d":"1.52E+07"},{"v":0.107,"d":"1.07E-01"},{"v":0.32171052631578945,"d":"3.22E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.644,15,9.66,40516,0,92216,0]
["GU2913","GEM-US-2913","GEM-221",26,"UTI","UTI","NA","Male","Male","Clean Catch","Yes","Enterococcus faecium",50000,"NA","NA","Yes","NA",5,50,"Illumina NextSeq ","2x75 bp ",{"v":9670000,"d":"9.67E+06"},{"v":79300,"d":"7.93E+04"},{"v":33500000,"d":"3.35E+07"},{"v":0.00819,"d":"8.19E-03"},{"v":0.28865671641791046,"d":"2.89E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,32,0.449,12,5.388,110517,1,111217,1]
["GU3012","GEM-US-3012","GEM-232",20,"UTI","UTI","NA","Female","Female","Clean Catch","Yes","Escherichia coli",20000,"NA","NA","Yes","NA",10,8,"Illumina NextSeq ","2x75 bp ",{"v":10700000,"d":"1.07E+07"},{"v":72600,"d":"7.26E+04"},{"v":28200000,"d":"2.82E+07"},{"v":0.00678,"d":"6.78E-03"},{"v":0.37943262411347517,"d":"3.79E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,32,0.676,12,8.112,110517,2,111217,2]
["GU32","GEM-US-1202","GEM-065",93,"No UTI","No UTI","NA","Male","Male","Clean Catch","Yes","NEG","NA","NA","NA","No","NA","NA","NA","Illumina NextSeq ","2x75 bp ",{"v":3840000,"d":"3.84E+06"},{"v":16300,"d":"1.63E+04"},{"v":17700000,"d":"1.77E+07"},{"v":0.00423,"d":"4.23E-03"},{"v":0.21694915254237288,"d":"2.17E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.427,15,6.405,91416,0,92816,0]
["GU36","GEM-US-716","GEM-075",12,"No UTI","No UTI","NA","Female","Male","Clean Catch","Yes","NEG","NA","NA","NA","No","NA",2,1,"Illumina NextSeq ","2x75 bp ",{"v":2670000,"d":"2.67E+06"},{"v":3180,"d":"3.18E+03"},{"v":11800000,"d":"1.18E+07"},{"v":0.00119,"d":"1.19E-03"},{"v":0.22627118644067798,"d":"2.26E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.45,15,6.75,90116,0,91016,0]
["GU37","GEM-US-732","GEM-078",9,"No UTI","No UTI","NA","Male","Male","Clean Catch","Yes","NEG","NA","NA","NA","No","NA",9,50,"Illumina NextSeq ","2x75 bp ",{"v":4480000,"d":"4.48E+06"},{"v":4730,"d":"4.73E+03"},{"v":18200000,"d":"1.82E+07"},{"v":1.06E-3,"d":"1.06E-03"},{"v":0.24615384615384617,"d":"2.46E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.376,15,5.64,90116,0,91016,0]
["GU41","GEM-US-838","GEM-074",29,"No UTI","No UTI","NA","Female","Male","Clean Catch","Yes","NEG","NA","NA","NA","No","NA",7,5,"Illumina NextSeq ","2x75 bp ",{"v":3110000,"d":"3.11E+06"},{"v":1030,"d":"1.03E+03"},{"v":10400000,"d":"1.04E+07"},{"v":3.3E-4,"d":"3.30E-04"},{"v":0.29903846153846153,"d":"2.99E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,1.54,15,23.1,90116,0,91016,0]
["GU42","GEM-US-840","GEM-075",28,"No UTI","No UTI","NA","Female","Male","Clean Catch","Yes","NEG","NA","NA","NA","No","NA",3,1,"Illumina NextSeq ","2x75 bp ",{"v":2400000,"d":"2.40E+06"},{"v":9090,"d":"9.09E+03"},{"v":12000000,"d":"1.20E+07"},{"v":3.79E-3,"d":"3.79E-03"},{"v":0.2,"d":"2.00E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.333,15,4.995,90116,0,91416,0]
["GU44","GEM-US-877","GEM-090",10,"No UTI","No UTI","NA","Male","Male","Clean Catch","Yes","NEG","NA","NA","NA","No","NA",4,12,"Illumina NextSeq ","2x75 bp ",{"v":5330000,"d":"5.33E+06"},{"v":849,"d":"8.49E+02"},{"v":16200000,"d":"1.62E+07"},{"v":0.000159,"d":"1.59E-04"},{"v":0.32901234567901233,"d":"3.29E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,1.73,15,25.95,91416,0,92816,0]
["GU45","GEM-US-887","GEM-078",29,"No UTI","No UTI","NA","Male","Male","Clean Catch","Yes","NEG","NA","NA","NA","No","NA",9,20,"Illumina NextSeq ","2x75 bp ",{"v":2780000,"d":"2.78E+06"},{"v":29200,"d":"2.92E+04"},{"v":12500000,"d":"1.25E+07"},{"v":0.0105,"d":"1.05E-02"},{"v":0.2224,"d":"2.22E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.436,15,6.54,90716,0,91416,0]
["GU454","GEM-US-454","GEM-057",7,"UTI","UTI","NA","Male","Female","Clean Catch","Yes","Escherichia coli",20000,"NA","NA","Yes","NA",0,50,"Illumina NextSeq ","2x75 bp ",{"v":13800000,"d":"1.38E+07"},{"v":37400,"d":"3.74E+04"},{"v":27300000,"d":"2.73E+07"},{"v":0.00271,"d":"2.71E-03"},{"v":0.5054945054945055,"d":"5.05E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,32,4.59,12,55.08,110517,2,111217,0]
["GU46","GEM-US-978","GEM-087",28,"No UTI","No UTI","NA","Male","Female","Clean Catch","Yes","NEG","NA","NA","NA","No","NA",12,3,"Illumina NextSeq ","2x75 bp ",{"v":3150000,"d":"3.15E+06"},{"v":55700,"d":"5.57E+04"},{"v":14700000,"d":"1.47E+07"},{"v":0.0177,"d":"1.77E-02"},{"v":0.21428571428571427,"d":"2.14E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.441,15,6.615,90716,0,91416,0]
["GU467","GEM-US-467","GEM-058",8,"UTI","UTI","NA","Female","Female","Clean Catch","Yes","Enterococcus faecalis",100000,"NA","NA","Yes","Susceptible",50,50,"Illumina NextSeq ","2x75 bp ",{"v":7530000,"d":"7.53E+06"},{"v":1590000,"d":"1.59E+06"},{"v":22000000,"d":"2.20E+07"},{"v":0.211,"d":"2.11E-01"},{"v":0.3422727272727273,"d":"3.42E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,32,0.869,12,10.428,110517,2,111217,1]
["GU5","GEM-US-259","GEM-040",8,"UTI","UTI","NA","Female","Female","Clean Catch","Yes","Escherichia coli",100000,"NA","NA","Yes","NA",50,8,"Illumina NextSeq ","2x75 bp ",{"v":4670000,"d":"4.67E+06"},{"v":46100000,"d":"4.61E+07"},{"v":25400000,"d":"2.54E+07"},{"v":9.85,"d":"9.85E+00"},{"v":0.18385826771653543,"d":"1.84E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,2.24,15,33.6,62716,0,71516,0]
["GU53","GEM-US-784","GEM-082",9,"UTI","UTI","NA","Female","Female","Clean Catch","Yes","Enterococcus faecalis",50000,"NA","NA","Yes","Susceptible",23,46,"Illumina NextSeq ","2x75 bp ",{"v":4220000,"d":"4.22E+06"},{"v":283000,"d":"2.83E+05"},{"v":18400000,"d":"1.84E+07"},{"v":0.0672,"d":"6.72E-02"},{"v":0.22934782608695653,"d":"2.29E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.808,15,12.12,112216,0,112316,0]
["GU55","GEM-US-543","GEM-041",42,"UTI","UTI","NA","Male","Male","Clean Catch","Yes","Escherichia coli",10000,"NA","NA","Yes","NA",0,1,"Illumina NextSeq ","2x75 bp ",{"v":2540000,"d":"2.54E+06"},{"v":57400,"d":"5.74E+04"},{"v":8360000,"d":"8.36E+06"},{"v":0.0226,"d":"2.26E-02"},{"v":0.3038277511961722,"d":"3.04E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.337,15,5.055,120116,0,120216,0]
["GU65","GEM-US-1195","GEM-111",6,"UTI","UTI","NA","Female","Female","Clean Catch","Yes","Escherichia coli",100000,"NA","NA","Yes","NA",17,27,"Illumina NextSeq ","2x75 bp ",{"v":3860000,"d":"3.86E+06"},{"v":20900000,"d":"2.09E+07"},{"v":22200000,"d":"2.22E+07"},{"v":5.43,"d":"5.43E+00"},{"v":0.17387387387387387,"d":"1.74E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,1.03,15,15.45,120216,0,120516,0]
["GU67","GEM-US-1752","GEM-129",36,"UTI","UTI","NA","Male","Female","Clean Catch","Yes","Enterococcus faecalis",100000,"NA","NA","Yes","Resistant",8,2,"Illumina NextSeq ","2x75 bp ",{"v":5470000,"d":"5.47E+06"},{"v":30400,"d":"3.04E+04"},{"v":19400000,"d":"1.94E+07"},{"v":0.00555,"d":"5.55E-03"},{"v":0.28195876288659794,"d":"2.82E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.74,15,11.1,120216,0,120516,0]
["GU69","GEM-US-465","GEM-026",55,"UTI","UTI","NA","Male","Female","Clean Catch","Yes","Escherichia coli",100000,"NA","NA","Yes","NA",27,1,"Illumina NextSeq ","2x75 bp ",{"v":5170000,"d":"5.17E+06"},{"v":1200000,"d":"1.20E+06"},{"v":18900000,"d":"1.89E+07"},{"v":0.233,"d":"2.33E-01"},{"v":0.27354497354497354,"d":"2.74E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.636,15,9.54,120616,0,121216,0]
["GU71","GEM-US-1146","GEM-096",29,"UTI","UTI","NA","Male","Female","Clean Catch","Yes","Enterococcus faecalis",80000,"NA","NA","Yes","Susceptible",6,4,"Illumina NextSeq ","2x75 bp ",{"v":5760000,"d":"5.76E+06"},{"v":774000,"d":"7.74E+05"},{"v":24300000,"d":"2.43E+07"},{"v":0.134,"d":"1.34E-01"},{"v":0.23703703703703705,"d":"2.37E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.454,15,6.81,120616,0,121216,0]
["GU73","GEM-US-1538","GEM-127",20,"UTI","UTI","NA","Male","Female","Clean Catch","Yes","Enterococcus faecium",20000,"NA","NA","Yes","Resistant",10,5,"Illumina NextSeq ","2x75 bp ",{"v":5230000,"d":"5.23E+06"},{"v":146000,"d":"1.46E+05"},{"v":23900000,"d":"2.39E+07"},{"v":0.0279,"d":"2.79E-02"},{"v":0.2188284518828452,"d":"2.19E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.44,15,6.6,120616,0,121217,0]
["GU74","GEM-US-1555","GEM-088",103,"UTI","UTI","NA","Male","Male","Clean Catch","Yes","Enterococcus faecalis",100000,"NA","NA","Yes","Susceptible",23,0,"Illumina NextSeq ","2x75 bp ",{"v":5800000,"d":"5.80E+06"},{"v":3470,"d":"3.47E+03"},{"v":25600000,"d":"2.56E+07"},{"v":0.000598,"d":"5.98E-04"},{"v":0.2265625,"d":"2.27E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,1.65,15,24.75,120616,0,121217,0]
["GU77","GEM-US-859","GEM-082",20,"UTI","UTI","NA","Female","Female","Clean Catch","Yes","Escherichia coli",30000,"NA","NA","Yes","NA",3,4,"Illumina NextSeq ","2x75 bp ",{"v":4410000,"d":"4.41E+06"},{"v":693000,"d":"6.93E+05"},{"v":21300000,"d":"2.13E+07"},{"v":0.157,"d":"1.57E-01"},{"v":0.20704225352112676,"d":"2.07E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.45,15,6.75,120716,0,121416,0]
["GU78","GEM-US-1088","GEM-088",43,"UTI","UTI","NA","Male","Male","Clean Catch","Yes","Enterococcus faecalis",80000,"NA","NA","Yes","Susceptible",50,2,"Illumina NextSeq ","2x75 bp ",{"v":3880000,"d":"3.88E+06"},{"v":5980,"d":"5.98E+03"},{"v":18700000,"d":"1.87E+07"},{"v":0.00154,"d":"1.54E-03"},{"v":0.20748663101604278,"d":"2.07E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.621,15,9.315,120716,0,121416,0]
["GU8","GEM-US-196","GEM-033",10,"No UTI","No UTI","NA","Male","Female","Clean Catch","Yes","NEG","NA","NA","NA","No","NA",17,19,"Illumina NextSeq ","2x75 bp ",{"v":3630000,"d":"3.63E+06"},{"v":3890,"d":"3.89E+03"},{"v":12400000,"d":"1.24E+07"},{"v":1.07E-3,"d":"1.07E-03"},{"v":0.29274193548387095,"d":"2.93E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,1.23,15,18.45,62716,1,80316,0]
["GU81","GEM-US-1954","GEM-165",9,"UTI","UTI","NA","Male","Female","Clean Catch","Yes","Enterococcus faecalis",100000,"NA","NA","Yes","Susceptible",16,50,"Illumina NextSeq ","2x75 bp ",{"v":5260000,"d":"5.26E+06"},{"v":169000,"d":"1.69E+05"},{"v":16700000,"d":"1.67E+07"},{"v":0.032,"d":"3.20E-02"},{"v":0.3149700598802395,"d":"3.15E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,5.81,15,87.15,120716,0,121416,0]
["GU82","GEM-US-1970","GEM-160",20,"UTI","UTI","NA","Male","Female","Clean Catch","Yes","Escherichia coli",70000,"NA","NA","Yes","NA",19,16,"Illumina NextSeq ","2x75 bp ",{"v":4740000,"d":"4.74E+06"},{"v":168000,"d":"1.68E+05"},{"v":22800000,"d":"2.28E+07"},{"v":0.0353,"d":"3.53E-02"},{"v":0.20789473684210527,"d":"2.08E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,1.09,15,16.35,120716,0,121416,0]
["GU83","GEM-US-2089","GEM-165",25,"UTI","UTI","NA","Male","Female","Clean Catch","Yes","Enterococcus faecalis",100000,"NA","NA","Yes","Susceptible",50,50,"Illumina NextSeq ","2x75 bp ",{"v":5130000,"d":"5.13E+06"},{"v":146000,"d":"1.46E+05"},{"v":23500000,"d":"2.35E+07"},{"v":0.0285,"d":"2.85E-02"},{"v":0.21829787234042553,"d":"2.18E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,1.76,15,26.4,120716,0,121416,0]
["GU9","GEM-US-384","GEM-041",22,"UTI","UTI","NA","Male","Male","Clean Catch","Yes","Escherichia coli",20000,"NA","NA","Yes","NA",16,5,"Illumina NextSeq ","2x75 bp ",{"v":4540000,"d":"4.54E+06"},{"v":146000,"d":"1.46E+05"},{"v":12600000,"d":"1.26E+07"},{"v":0.0322,"d":"3.22E-02"},{"v":0.3603174603174603,"d":"3.60E-01"},"NYPresbyterian_USA","New York, New York, USA",1000,30,0.46,10,4.6,62716,1,82816,0]

{"sheet":"AmnioticFluid_cfDNA","index":1,"n_rows":41,"n_cols":32,"rows_kept":41}
["Sample","Fetal_sex","IL_6","IL6_grade","AF_RBC","AF_Gluco","AF_LDH","AF_WBC","AF_Culture","Chorio_Group","IBIS","IBIS_Bacteria_1","IBIS_Bacteria_2","IBIS_Euk_1","Sequencing Platform ","Sequencing Read Length","hg19-aligned Paired Reads","Adjusted BLAST HITs","Raw Sequencing Reads","BLAST Hits to Human Reads","Fraction Host DNA","Collaborator_Lab","Region_of_origin","Volume_biofluid_ul","Volume_extracted_ul","Concentration_extracted","Volume_into_libprep","Biomass_at_libprep_ng","Date_extraction","Batch_extraction","Date_libprep","Batch_libprep"]
["CHI077906","Male",3267.456,"Elevated","NA",9,"NA",0,"Negative","Chorio","Negative",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":4160000,"d":"4.16E+06"},{"v":227000,"d":"2.27E+05"},{"v":52400000,"d":"5.24E+07"},{"v":0.0545,"d":"5.45E-02"},{"$f":"Q2/S2","v":{"v":0.07938931297709924,"d":"7.94E-02"}},"WayneState_USA","Detroit, Michigan, USA",175,30,0.304,12,3.648,50218,0,50318,0]
["CHI089323","Male",10370.628,"Elevated","NA",9,"NA",25,"Negative","Chorio","Negative",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":18300000,"d":"1.83E+07"},{"v":1010,"d":"1.01E+03"},{"v":41200000,"d":"4.12E+07"},{"v":5.49E-5,"d":"5.49E-05"},{"$f":"Q3/S3","v":{"v":0.4441747572815534,"d":"4.44E-01"}},"WayneState_USA","Detroit, Michigan, USA",175,30,3.3,12,39.6,50218,0,50318,0]
["CHI132867","Female",4738.886,"Elevated","NA",24,"NA",0,"Negative","Chorio","Negative",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":21100000,"d":"2.11E+07"},{"v":911,"d":"9.11E+02"},{"v":47800000,"d":"4.78E+07"},{"v":4.32E-5,"d":"4.32E-05"},{"v":0.44142259414225943,"d":"4.41E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,3.26,12,39.12,50218,0,50318,0]
["CHI475355","Female",3069.305,"Elevated","NA",10,"NA",25,"Negative","Chorio","Negative",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":14600000,"d":"1.46E+07"},{"v":16800,"d":"1.68E+04"},{"v":41100000,"d":"4.11E+07"},{"v":1.15E-3,"d":"1.15E-03"},{"v":0.35523114355231145,"d":"3.55E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.978,12,11.736,43018,0,50118,0]
["CHI475935","Female",14979.305,"Elevated","NA",9,"NA",85,"Negative","Chorio","Negative",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":19800000,"d":"1.98E+07"},{"v":12200,"d":"1.22E+04"},{"v":53000000,"d":"5.30E+07"},{"v":0.000616,"d":"6.16E-04"},{"v":0.37358490566037733,"d":"3.74E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.71,12,8.52,43018,0,50118,0]
["CHI520236","Male",19034.888,"Elevated","NA",9,"NA",2600,"Negative","Chorio","Negative",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":11500000,"d":"1.15E+07"},{"v":2390,"d":"2.39E+03"},{"v":28300000,"d":"2.83E+07"},{"v":0.000208,"d":"2.08E-04"},{"v":0.40636042402826855,"d":"4.06E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,8.4,12,100.8,43018,0,50118,0]
["HUZ204705","Male",161,"Low",61,12,84,2,"Negative","Normal","Not Done",{"$nulls":3},"Illumina HiSeq","2x100bp",{"v":42100000,"d":"4.21E+07"},{"v":2200,"d":"2.20E+03"},{"v":140000000,"d":"1.40E+08"},{"v":5.23e-05,"d":"5.23E-05"},{"v":0.3007142857142857,"d":"3.01E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.453,12,5.436,102017,0,112817,0]
["HUZ216631","Female",646,"Low",2000,9,365,2,"Negative","Normal","Not Done",{"$nulls":3},"Illumina HiSeq","2x100bp",{"v":39000000,"d":"3.90E+07"},{"v":48.2,"d":"4.82E+01"},{"v":114000000,"d":"1.14E+08"},{"v":1.24E-6,"d":"1.24E-06"},{"v":0.34210526315789475,"d":"3.42E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,1.07,12,12.84,101317,0,120617,0]
["HUZ217739","Female",140,"Low",4126,9,220,3,"Negative","Normal","Not Done",{"$nulls":3},"Illumina HiSeq","2x100bp",{"v":25400000,"d":"2.54E+07"},{"v":915,"d":"9.15E+02"},{"v":81400000,"d":"8.14E+07"},{"v":3.6e-05,"d":"3.60E-05"},{"v":0.31203931203931207,"d":"3.12E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.691,12,8.292,102017,0,120617,0]
["HUZ222017","Female",205,"Low",243,18,336,8,"Negative","Normal","Not Done",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":23200000,"d":"2.32E+07"},{"v":77.5,"d":"7.75E+01"},{"v":62300000,"d":"6.23E+07"},{"v":3.35e-06,"d":"3.35E-06"},{"v":0.3723916532905297,"d":"3.72E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.922,12,11.064,102017,0,112817,0]
["HUZ247134","Male",208,"Low",-99,10,-99,-99,"Negative","Chorio","Negative",{"$nulls":3},"Illumina HiSeq","2x100bp",{"v":19400000,"d":"1.94E+07"},{"v":70700,"d":"7.07E+04"},{"v":70900000,"d":"7.09E+07"},{"v":3.64E-3,"d":"3.64E-03"},{"v":0.2736248236953456,"d":"2.74E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.757,12,9.084,100417,0,110317,0]
["HUZ260775","Male",5,"Low",200,20,-99,0,"Negative","Normal","Not Done",{"$nulls":3},"Illumina HiSeq","2x100bp",{"v":35200000,"d":"3.52E+07"},{"v":4360,"d":"4.36E+03"},{"v":128000000,"d":"1.28E+08"},{"v":0.000124,"d":"1.24E-04"},{"v":0.275,"d":"2.75E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.344,12,4.128,102017,0,112817,0]
["HUZ279531","Male",414,"Low",30,17,295,450,"Negative","Normal","Not Done",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":60900000,"d":"6.09E+07"},{"v":146,"d":"1.46E+02"},{"v":151000000,"d":"1.51E+08"},{"v":2.4e-06,"d":"2.40E-06"},{"v":0.4033112582781457,"d":"4.03E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,1.86,12,22.32,101317,0,110317,0]
["HUZ286696","Male",137,"Low",10,21,273,0,"Negative","Normal","Not Done",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":18500000,"d":"1.85E+07"},{"v":9410,"d":"9.41E+03"},{"v":61400000,"d":"6.14E+07"},{"v":0.000509,"d":"5.09E-04"},{"v":0.30130293159609123,"d":"3.01E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.644,12,7.728,102017,0,110317,0]
["HUZ287757","Female",615,"Low",25,10,413,95,"Negative","Normal","Not Done",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":14300000,"d":"1.43E+07"},{"v":24.8,"d":"2.48E+01"},{"v":42600000,"d":"4.26E+07"},{"v":1.73E-6,"d":"1.73E-06"},{"v":0.33568075117370894,"d":"3.36E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,1.91,12,22.92,101317,0,112817,0]
["HUZ287915","Female",330,"Low",3,19,303,5,"Negative","Normal","Not Done",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":19500000,"d":"1.95E+07"},{"v":4220,"d":"4.22E+03"},{"v":79900000,"d":"7.99E+07"},{"v":0.000217,"d":"2.17E-04"},{"v":0.24405506883604505,"d":"2.44E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.493,12,5.916,102017,0,110317,0]
["HUZ288036","Male",278,"Low",25,10,326,1,"Negative","Normal","Not Done",{"$nulls":3},"Illumina HiSeq","2x100bp",{"v":21500000,"d":"2.15E+07"},{"v":22100,"d":"2.21E+04"},{"v":129000000,"d":"1.29E+08"},{"v":0.00103,"d":"1.03E-03"},{"v":0.16666666666666666,"d":"1.67E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.448,12,5.376,102017,0,110317,0]
["HUZ293712","Female",840,"Low",0,15,238,0,"Negative","Normal","Not Done",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":17900000,"d":"1.79E+07"},{"v":679,"d":"6.79E+02"},{"v":57700000,"d":"5.77E+07"},{"v":3.79E-5,"d":"3.79E-05"},{"v":0.31022530329289427,"d":"3.10E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.666,12,7.992,101317,0,112817,0]
["HUZ422074","Male",1090.8,"Low",-99,-99,-99,-99,"Negative","Normal","Not Done",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":27700000,"d":"2.77E+07"},{"v":0.0914,"d":"9.14E-02"},{"v":68400000,"d":"6.84E+07"},{"v":3.29E-9,"d":"3.29E-09"},{"v":0.40497076023391815,"d":"4.05E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,4.4,12,52.8,101317,0,120617,0]
["HUZ422168","Male",479,"Low",20,20,-99,90,"Negative","Normal","Not Done",{"$nulls":3},"Illumina HiSeq","2x100bp",{"v":35300000,"d":"3.53E+07"},{"v":260,"d":"2.60E+02"},{"v":86100000,"d":"8.61E+07"},{"v":7.37e-06,"d":"7.37E-06"},{"v":0.4099883855981417,"d":"4.10E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,3.04,12,36.48,101317,0,110317,0]
["HUZ424454","Female",577,"Low",690,15,-99,0,"Negative","Normal","Not Done",{"$nulls":3},"Illumina HiSeq","2x100bp",{"v":32100000,"d":"3.21E+07"},{"v":17000,"d":"1.70E+04"},{"v":108000000,"d":"1.08E+08"},{"v":0.000528,"d":"5.28E-04"},{"v":0.2972222222222222,"d":"2.97E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.606,12,7.272,101317,0,120617,0]
["HUZ426529","Male",235,"Low",0,20,"NA",0,"Negative","Normal","Not Done",{"$nulls":3},"Illumina HiSeq","2x100bp",{"v":14300000,"d":"1.43E+07"},{"v":63900,"d":"6.39E+04"},{"v":49400000,"d":"4.94E+07"},{"v":0.00446,"d":"4.46E-03"},{"v":0.2894736842105263,"d":"2.89E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.392,12,4.704,102017,0,120617,0]
["HUZ603273","Male",19515,"Elevated",3,10,0,-99,"Positive","Chorio","Positive","Streptococcus agalactiae",null,null,"Illumina NextSeq","2x75bp",{"v":14000000,"d":"1.40E+07"},{"v":60100,"d":"6.01E+04"},{"v":72200000,"d":"7.22E+07"},{"v":4.28E-3,"d":"4.28E-03"},{"v":0.19390581717451524,"d":"1.94E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.79,12,9.48,100417,0,112817,0]
["HUZ630890","Female",540,"Low",12,5,-99,9,"Negative","Chorio","Negative",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":28700000,"d":"2.87E+07"},{"v":278000,"d":"2.78E+05"},{"v":131000000,"d":"1.31E+08"},{"v":0.00968,"d":"9.68E-03"},{"v":0.21908396946564884,"d":"2.19E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.262,12,3.144,92917,0,102417,0]
["HUZ661766","Female",190,"Low",21,6,-99,0,"Negative","Chorio","Negative",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":33400000,"d":"3.34E+07"},{"v":31400,"d":"3.14E+04"},{"v":118000000,"d":"1.18E+08"},{"v":0.000938,"d":"9.38E-04"},{"v":0.2830508474576271,"d":"2.83E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.504,12,6.048,92917,0,102417,0]
["HUZ688725","Female",71270,"Elevated",163,11,-99,30,"Negative","Chorio","Negative",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":18000000,"d":"1.80E+07"},{"v":460,"d":"4.60E+02"},{"v":46000000,"d":"4.60E+07"},{"v":2.56e-05,"d":"2.56E-05"},{"v":0.391304347826087,"d":"3.91E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.882,12,10.584,50218,0,50318,0]
["HUZ688737","Female",41600,"Elevated",194,1,-99,19,"Positive","Chorio","Positive","Gardnerella vaginalis","Streptococcus anginosus",null,"Illumina HiSeq","2x100bp",{"v":15400000,"d":"1.54E+07"},{"v":107000,"d":"1.07E+05"},{"v":46500000,"d":"4.65E+07"},{"v":0.0069,"d":"6.90E-03"},{"v":0.3311827956989247,"d":"3.31E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,1.68,12,20.16,100417,0,112817,0]
["HUZ688774","Female",5470,"Elevated",4,3,-99,2,"Negative","Chorio","Negative",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":21600000,"d":"2.16E+07"},{"v":6300,"d":"6.30E+03"},{"v":61500000,"d":"6.15E+07"},{"v":0.000291,"d":"2.91E-04"},{"v":0.35121951219512193,"d":"3.51E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.872,12,10.464,50218,0,50318,0]
["HUZ688815","Female",416,"Low",4,6,-99,0,"Negative","Chorio","Negative",{"$nulls":3},"Illumina HiSeq","2x100bp",{"v":15400000,"d":"1.54E+07"},{"v":55300,"d":"5.53E+04"},{"v":86000000,"d":"8.60E+07"},{"v":0.00359,"d":"3.59E-03"},{"v":0.17906976744186046,"d":"1.79E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.332,12,3.984,92917,0,102417,0]
["HUZ688834","Male",51300,"Elevated",1510,1,576,340,"Positive","Chorio","Positive","Streptococcus agalactiae","Ureaplasma parvum",null,"Illumina NextSeq","2x75bp",{"v":36700000,"d":"3.67E+07"},{"v":419,"d":"4.19E+02"},{"v":82900000,"d":"8.29E+07"},{"v":1.14e-05,"d":"1.14E-05"},{"v":0.4427020506634499,"d":"4.43E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,13.2,12,158.4,100417,0,112817,0]
["HUZ694453","Female",11480,"Elevated",328,8,-99,70,"Positive","Chorio","Positive","Gardnerella vaginalis","Ureaplasma urealyticum",null,"Illumina HiSeq","2x100bp",{"v":38400000,"d":"3.84E+07"},{"v":7100,"d":"7.10E+03"},{"v":102000000,"d":"1.02E+08"},{"v":1.85E-4,"d":"1.85E-04"},{"v":0.3764705882352941,"d":"3.76E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,1.77,12,21.24,100417,0,120617,0]
["HUZ694877","Male",105,"Low",28,21,-99,2,"Negative","Chorio","Negative",{"$nulls":3},"Illumina HiSeq","2x100bp",{"v":24900000,"d":"2.49E+07"},{"v":81000,"d":"8.10E+04"},{"v":82400000,"d":"8.24E+07"},{"v":0.00325,"d":"3.25E-03"},{"v":0.30218446601941745,"d":"3.02E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.452,12,5.424,92917,0,102417,0]
["HUZ695075","Male",1160,"Low",28,-1,-99,6,"Negative","Chorio","Negative",{"$nulls":3},"Illumina HiSeq","2x100bp",{"v":31900000,"d":"3.19E+07"},{"v":69100,"d":"6.91E+04"},{"v":110000000,"d":"1.10E+08"},{"v":2.16E-3,"d":"2.16E-03"},{"v":0.29,"d":"2.90E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.563,12,6.756,92917,0,102417,0]
["HUZ695190","Male",90100,"Elevated",1093,0,-99,3,"Positive","Chorio","Positive","Ureaplasma parvum",null,null,"Illumina HiSeq","2x100bp",{"v":8840000,"d":"8.84E+06"},{"v":2630000,"d":"2.63E+06"},{"v":43500000,"d":"4.35E+07"},{"v":0.298,"d":"2.98E-01"},{"v":0.2032183908045977,"d":"2.03E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,3.29,12,39.48,100417,0,120617,0]
["HUZ695248","Female",28500,"Elevated",40,1,-99,530,"Positive","Chorio","Positive","Streptococcus agalactiae",null,null,"Illumina NextSeq","2x75bp",{"v":16100000,"d":"1.61E+07"},{"v":484000,"d":"4.84E+05"},{"v":69000000,"d":"6.90E+07"},{"v":0.0301,"d":"3.01E-02"},{"v":0.23333333333333334,"d":"2.33E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,1.36,12,16.32,100417,0,110317,0]
["HUZ695323","Male",19000,"Elevated",14300,7,-99,900,"Positive","Chorio","Positive","Gardnerella vaginalis",null,null,"Illumina NextSeq","2x75bp",{"v":37800000,"d":"3.78E+07"},{"v":1100,"d":"1.10E+03"},{"v":84500000,"d":"8.45E+07"},{"v":2.9E-5,"d":"2.90E-05"},{"v":0.44733727810650886,"d":"4.47E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,3.39,12,40.68,101317,0,112817,0]
["HUZ695379","Male",5760,"Elevated",1280,1,-99,3,"Negative","Chorio","Negative",{"$nulls":3},"Illumina NextSeq","2x75bp",{"v":7680000,"d":"7.68E+06"},{"v":19600,"d":"1.96E+04"},{"v":49500000,"d":"4.95E+07"},{"v":0.00255,"d":"2.55E-03"},{"v":0.15515151515151515,"d":"1.55E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,0.448,12,5.376,50218,0,50318,0]
["HUZ695384","Male",128600,"Elevated",1075,1,-99,878,"Positive","Chorio","Positive","Fusobacterium nucleatum",null,null,"Illumina NextSeq","2x75bp",{"v":16500000,"d":"1.65E+07"},{"v":14500,"d":"1.45E+04"},{"v":46400000,"d":"4.64E+07"},{"v":0.000881,"d":"8.81E-04"},{"v":0.35560344827586204,"d":"3.56E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,14.5,12,174,100417,0,110317,0]
["HUZ695731","Female",29300,"Elevated",34950,0.9,-99,1650,"Positive","Chorio","Positive","Ureaplasma urealyticum","Lactobacillus crispatus","Candida albicans","Illumina HiSeq","2x100bp",{"v":29000000,"d":"2.90E+07"},{"v":4310,"d":"4.31E+03"},{"v":79800000,"d":"7.98E+07"},{"v":0.000149,"d":"1.49E-04"},{"v":0.3634085213032581,"d":"3.63E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,23.3,12,279.6,101317,0,110317,0]
["HUZ696809","Female",7760,"Elevated",2963,1,-99,191,"Positive","Chorio","Positive","Ureaplasma parvum",null,null,"Illumina HiSeq","2x100bp",{"v":42300000,"d":"4.23E+07"},{"v":46100,"d":"4.61E+04"},{"v":105000000,"d":"1.05E+08"},{"v":1.09E-3,"d":"1.09E-03"},{"v":0.40285714285714286,"d":"4.03E-01"},"WayneState_USA","Detroit, Michigan, USA",175,30,5.19,12,62.28,100417,0,120617,0]